BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018876
(349 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 275/350 (78%), Positives = 319/350 (91%), Gaps = 1/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQP+KAH+LFQAM+DEGC +S+TALLSAYGRSGLFDKAFS++E MKNTPDC+
Sbjct: 39 MLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCR 98
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKSCL+ FAFDKVQ LLSDM + GIRPNTVTYNT+IDAYG+AKMFAEME T
Sbjct: 99 PDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFAEMEAT 158
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++MLS+ DCEPDVWTMN T+RAFG SGQ++ ME CYEKFQSAGI+P+I TFNILLDSYG
Sbjct: 159 LMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYG 218
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG+++KMSAVMEYMQ+YHYSWTIVTYN+VIDAFGRAGDLKQMEYLFRLMRSERIKPSCV
Sbjct: 219 KAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 278
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAY AGKPEK+GSVLRFI+NSD+ LDTVFFNCLVDAYGRL+CFAEMK VLE+M
Sbjct: 279 TLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELM 338
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++GCKPDKVTYRTM++AYS GM +HAK+ ++L+ ++ T K+PDF
Sbjct: 339 EEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVEVTRSPKKKPDF 388
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/350 (79%), Positives = 311/350 (88%), Gaps = 1/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAH LF AM+DEGC N +++TALLSAY RSGLFDKAFSLLE MKNTPDCQ
Sbjct: 147 MLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQ 206
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYS+LIKSCL+ AFDKV LLSDM+ QGI+PNTVTYNTLIDAYG+AK FAEME T
Sbjct: 207 PDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMEST 266
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ML E CEPDVWTMN TLRAFG+SGQI+TMEKCYEKFQSAGI+P+I TFNILLDSYG
Sbjct: 267 LLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYG 326
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA +EKMSAVMEYMQKYH+SWTIVTYN+VIDAFGRAGDLKQMEYLFRLMRSERIKPSCV
Sbjct: 327 KAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 386
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG AGK EK+G VLRFI+NSD+MLD VFFNCLVDAYGRL CFAEMKGVLE+M
Sbjct: 387 TLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMM 446
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++GCKPDK+TYRTM++AY GM + AKE Q L+ DET L M +PDF
Sbjct: 447 KKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPDETRLEMGKPDF 496
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 37/265 (13%)
Query: 95 RPNTVT-----------------------------------YNTLIDAYGRAKMFAEMEL 119
RPN+ Y L+ AY R+ +F +
Sbjct: 135 RPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFS 194
Query: 120 TLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L KM + DC+PDV T + +++ D + + GI+P+ T+N L+D+Y
Sbjct: 195 LLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAY 254
Query: 179 GKAGHFEKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GKA F +M S ++E +++ + T N + AFG +G ++ ME + +S I+P+
Sbjct: 255 GKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPN 314
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ +YG A K EK+ +V+ ++ V +N ++DA+GR +M+ +
Sbjct: 315 IKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFR 374
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNG 322
+M+ KP VT ++VRAY G
Sbjct: 375 LMRSERIKPSCVTLCSLVRAYGRAG 399
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/346 (78%), Positives = 305/346 (88%), Gaps = 5/346 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAHELFQAM+ EGCD + +S+TALLSAYGRSGL DKAFSLLE MK PDCQ
Sbjct: 164 MLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQ 223
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKSC++ FAFDK + LLS+M + GI PNT+TYNTLIDAYG+AKMF EME T
Sbjct: 224 PDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMFEEMEAT 283
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LVKMLS+ +CEPDVWTMN TLRAFG SGQI+TMEKCYEKFQ AGI+PSI TFN+LLDSYG
Sbjct: 284 LVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYG 343
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KMSAVMEYMQKYHYSWTI+TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV
Sbjct: 344 KAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 403
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG A KPEK+ VLRFI+NSDI LDTVFFNCLVDAYGR+ CFAEMKGVL +M
Sbjct: 404 TLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILM 463
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL----VEKMDETC 341
+Q+G +PDK+TYRTM++AYS+ GM H KE QDL V K++ C
Sbjct: 464 EQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEAAGVRKVNNPC 509
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/350 (76%), Positives = 308/350 (88%), Gaps = 1/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAHELFQAMVDEGC + +S+TALLSAY RSGL DKAFSLLE MKNTP CQ
Sbjct: 166 MLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQ 225
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSIL+KSCL+ FAFDK+Q+LLSDM+ +GI+PNTVTYNTLIDAYG+A+ F+EME
Sbjct: 226 PDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESI 285
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+ML++ C+PDVWTMN TLRAFGN GQI+TMEKCYEKFQ+AGIQP++ TFNILLDSYG
Sbjct: 286 LVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYG 345
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA ++KMSAVMEYMQKYHYSWTIVT+NIVIDAFG+AGDLKQMEYLFRLMRSERIKPSCV
Sbjct: 346 KAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCV 405
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAY AGKPEK+ VLRF++NSD++LDTVFFNCLVDAY RL C AEMKGVLE+M
Sbjct: 406 TLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMM 465
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+Q GCKPD VTYRTM++ Y+ GM +HAKE ++L+ ++ L +PDF
Sbjct: 466 KQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPTVNRPPLKRDKPDF 515
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 12/271 (4%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ---------GIRPNTVTYNTLIDAYGRAKM 113
+N+ +L ++ L+A ++V AL + + + +P+T Y LI G+ K
Sbjct: 114 INSKKLLPRTVLEAL-HERVTALRWESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQ 172
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFN 172
+ M+ E C D + L A+ SG +D E+ + + G QP + T++
Sbjct: 173 PEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYS 232
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
ILL S + F+K+ +++ M VTYN +IDA+G+A +ME + M ++
Sbjct: 233 ILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLAD 292
Query: 233 RI-KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
R +P T+ S +RA+G+ G+ E + N+ I + FN L+D+YG+ + + +
Sbjct: 293 RYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKK 352
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
M V+E MQ+ VT+ ++ A+ G
Sbjct: 353 MSAVMEYMQKYHYSWTIVTFNIVIDAFGKAG 383
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/350 (76%), Positives = 304/350 (86%), Gaps = 3/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQ EKA+ELFQ M++EGC+ + +S+TALLSAY RSGL D+AFS+L MKN+PDCQ
Sbjct: 109 MLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQ 168
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKSCL+ FAF+K Q LLSDM T+GI+PNT+TYNT IDAYG+AKMFAEME
Sbjct: 169 PDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESI 228
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV ML++D C+PDVWTMN TLRAFG SGQ++TMEKCYEKFQ AGIQPSI TFNILLDSYG
Sbjct: 229 LVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYG 288
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA +EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG+LKQME+LFRLMRSERIKPSCV
Sbjct: 289 KAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCV 348
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG AGK EK+ SVL ++NSDIMLDTVF+NCLVDAYGRL+CFAEMK VL +M
Sbjct: 349 TLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMM 408
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+QRGCKPDK TYRTM RAYS GM NHAKE Q+L+ + + RPD
Sbjct: 409 EQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPS--KRTRPDL 456
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT--- 151
RP Y LI G+ K + +M+ E CE + L A+ SG +D
Sbjct: 97 RPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFS 156
Query: 152 ---------------------MEKCYEKFQ------------SAGIQPSINTFNILLDSY 178
++ C + F + GI+P+ T+N +D+Y
Sbjct: 157 ILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAY 216
Query: 179 GKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GKA F +M +++ + + + T N + AFGR+G L+ ME + + I+PS
Sbjct: 217 GKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPS 276
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ +YG A EK+ +V+ ++ V +N ++DA+GR +M+ +
Sbjct: 277 IQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFR 336
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+M+ KP VT ++VRAY G + +LVE D
Sbjct: 337 LMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSD 377
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/350 (76%), Positives = 304/350 (86%), Gaps = 3/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQ EKA+ELFQ M++EGC+ + +S+TALLSAY RSGL D+AFS+L MKN+PDCQ
Sbjct: 164 MLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQ 223
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKSCL+ FAF+K Q LLSDM T+GI+PNT+TYNT IDAYG+AKMFAEME
Sbjct: 224 PDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESI 283
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV ML++D C+PDVWTMN TLRAFG SGQ++TMEKCYEKFQ AGIQPSI TFNILLDSYG
Sbjct: 284 LVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYG 343
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA +EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG+LKQME+LFRLMRSERIKPSCV
Sbjct: 344 KAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCV 403
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG AGK EK+ SVL ++NSDIMLDTVF+NCLVDAYGRL+CFAEMK VL +M
Sbjct: 404 TLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMM 463
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+QRGCKPDK TYRTM RAYS GM NHAKE Q+L+ + + RPD
Sbjct: 464 EQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPS--KRTRPDL 511
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT--- 151
RP Y LI G+ K + +M+ E CE + L A+ SG +D
Sbjct: 152 RPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFS 211
Query: 152 ---------------------MEKCYEKFQ------------SAGIQPSINTFNILLDSY 178
++ C + F + GI+P+ T+N +D+Y
Sbjct: 212 ILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAY 271
Query: 179 GKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GKA F +M +++ + + + T N + AFGR+G L+ ME + + I+PS
Sbjct: 272 GKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPS 331
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ +YG A EK+ +V+ ++ V +N ++DA+GR +M+ +
Sbjct: 332 IQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFR 391
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+M+ KP VT ++VRAY G + +LVE D
Sbjct: 392 LMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSD 432
>gi|224069806|ref|XP_002303044.1| predicted protein [Populus trichocarpa]
gi|222844770|gb|EEE82317.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/350 (75%), Positives = 306/350 (87%), Gaps = 14/350 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQP+KAH+LFQAM+DEGC +S+TALLSAYGRSGLFDKAFS++E MKNTPDC+
Sbjct: 149 MLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCR 208
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKSCL+ FAFDKVQ LLSDM + GIRPNTVT FAEME T
Sbjct: 209 PDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVT-------------FAEMEAT 255
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++MLS+ DCEPDVWTMN T+RAFG SGQ++ ME CYEKFQSAGI+P+I TFNILLDSYG
Sbjct: 256 LMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYG 315
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG+++KMSAVMEYMQ+YHYSWTIVTYN+VIDAFGRAGDLKQMEYLFRLMRSERIKPSCV
Sbjct: 316 KAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 375
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAY AGKPEK+GSVLRFI+NSD+ LDTVFFNCLVDAYGRL+CFAEMK VLE+M
Sbjct: 376 TLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELM 435
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++GCKPDKVTYRTM++AYS GM +HAK+ ++L+ ++ T K+PDF
Sbjct: 436 EEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVEVTRSPKKKPDF 485
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 259/350 (74%), Positives = 303/350 (86%), Gaps = 1/350 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAHELFQ M++EGC N + +TAL+SAY RSG FD AF+LLE MK++ +CQ
Sbjct: 159 MLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQ 218
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKS L+ FAFDKVQ LLSDM QGIRPNT+TYNTLIDAYG+AKMF EME T
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ML ED C+PD WTMN TLRAFG +GQI+ ME CYEKFQS+GI+P+I TFNILLDSYG
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G+++KMSAVMEYMQKYHYSWTIVTYN+VIDAFGRAGDLKQMEYLFRLM+SERI PSCV
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 398
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG A K +K+G VLRFI+NSDI LD VFFNCLVDAYGR++ FAEMKGVLE+M
Sbjct: 399 TLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELM 458
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++G KPDK+TYRTMV+AY +GM H KE +VE + E + +K+PDF
Sbjct: 459 EKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEAQVVVKKPDF 508
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+PN Y LI G+ K + +M++E C + + A+ SG+ D
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 155 CYEKFQSA-GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
E+ +S+ QP ++T++IL+ S+ + F+K+ ++ M++ +TYN +IDA+
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 214 GRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+A +ME L +++ + KP T+ S +RA+G G+ E + + +S I +
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
FN L+D+YG+ + +M V+E MQ+ VTY ++ A+ G
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 376
>gi|9758872|dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana]
Length = 495
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/350 (70%), Positives = 290/350 (82%), Gaps = 14/350 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAHELFQ M++EGC N + +TAL+SAY RSG FD AF+LLE MK++ +CQ
Sbjct: 159 MLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQ 218
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKS L+ FAFDKVQ LLSDM QGIRPNT+T F EME T
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT-------------FVEMEST 265
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ML ED C+PD WTMN TLRAFG +GQI+ ME CYEKFQS+GI+P+I TFNILLDSYG
Sbjct: 266 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 325
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G+++KMSAVMEYMQKYHYSWTIVTYN+VIDAFGRAGDLKQMEYLFRLM+SERI PSCV
Sbjct: 326 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 385
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG A K +K+G VLRFI+NSDI LD VFFNCLVDAYGR++ FAEMKGVLE+M
Sbjct: 386 TLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELM 445
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++G KPDK+TYRTMV+AY +GM H KE +VE + E + +K+PDF
Sbjct: 446 EKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEAQVVVKKPDF 495
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/350 (70%), Positives = 289/350 (82%), Gaps = 14/350 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAHELFQ M++EGC N + +TALLSAY RSG FD AF+LLE MK++ +CQ
Sbjct: 162 MLGKCKQPEKAHELFQEMINEGCVVNHEVYTALLSAYSRSGRFDAAFTLLERMKSSHNCQ 221
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILIKS L+ FAFDKV LLSDM GIRPNT+T F EME T
Sbjct: 222 PDVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTIT-------------FVEMEST 268
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ML ED C+PD WTMN TLRAFG +GQI+ ME CYEKFQS+GI+P+I TFNILLDSYG
Sbjct: 269 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 328
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G+++KMSAVMEYMQKYHYSWTIVTYN+VIDAFGRAGDLKQMEYLFRLM+SERI PSCV
Sbjct: 329 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIIPSCV 388
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLCSLVRAYG AGK +K+G VLRFI+NSDI LD VFFNCLVDAYGR++ FAEMKGVLE+M
Sbjct: 389 TLCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELM 448
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+++G KPDK+TYRTMV+AY +GM H KE + E + ET + +K+PDF
Sbjct: 449 EKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVGESVGETQVVLKKPDF 498
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 231/330 (70%), Positives = 286/330 (86%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCK+PEKAHELFQAM+DEGC N +S+TAL+SAY RSG F +AF+LL+ MK+TP CQ
Sbjct: 150 MLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQ 209
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIKSCL A+ F+KV++LL+DM+ GIRPNTVTYNTLIDAYG+A+ F EME T
Sbjct: 210 PDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLIDAYGKARRFPEMEST 269
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L+KMLS++C+PD+WTMN TLRAFG+SGQI+TME CYEKFQ++GI P+I T+NILLDSYGK
Sbjct: 270 LLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGK 329
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A +EKM AVMEYMQKY+YSWTIVTYN+VIDAFGRAGDL+QMEY+FRLM+SERIKP+CVT
Sbjct: 330 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 389
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LCS+VRAYG AG+ +K+ +VLR ++NSDI LD VFFNCLVDAYGR+ C AEM +L++M+
Sbjct: 390 LCSVVRAYGRAGEVKKIKTVLRIVENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMK 449
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ CKPDKVT TM++ + G+ +H ++
Sbjct: 450 EHRCKPDKVTCATMIKWFLIKGIDDHRVQY 479
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 233/330 (70%), Positives = 281/330 (85%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPE+AHELFQAMVDEGC N +S+TAL+SAY RSG FD+AFSLLE MK TP C+
Sbjct: 169 MLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMKATPGCR 228
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIKSCL A+ F++V+ L+ DM+ GIRPN VTYNTLIDAYG+A FAEME T
Sbjct: 229 PDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMEST 288
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L++ML+E+C+PDVWTMN TLRAFG SGQI+TME CYEKFQ++GI P+I T+NILLDSYGK
Sbjct: 289 LLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGK 348
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A +EKM AVMEYMQKY+YSWTIVTYN+VIDAFGRAGDL+QMEY+FRLM+SERIKP+CVT
Sbjct: 349 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 408
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LCSLVRAYG AG +K+ +VLR ++NSDI LD VFFNCLVDA+GR+ C AEM VL++M+
Sbjct: 409 LCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMK 468
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ CKPDKVT TM++ + G+ +H ++
Sbjct: 469 LQRCKPDKVTCTTMIKWFLIKGIDDHRVQY 498
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 232/330 (70%), Positives = 282/330 (85%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPEKAH+LFQAM+DEGC N QS+TAL+S Y RSG F +AF LL+ MK+TP CQ
Sbjct: 150 MLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRMKDTPGCQ 209
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIKSCL A+ F+KV++LL+DM+ GI PNTVTYNTLIDAYG+A FAEME T
Sbjct: 210 PDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMEST 269
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L+KMLS++C+PDVWTMN TLRAFG+SGQI+TME CYEKFQ++GI P+I T+NILLDSYGK
Sbjct: 270 LLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGK 329
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A +EKM AVMEYMQKY+YSWTIVTYN+VIDAFGRAGDL+QMEY+FRLM+SERIKP+CVT
Sbjct: 330 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 389
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LCS+VRAYG AG+ +K+ + LR I+NSDI LD VFFNCLVDAYGR+ C AEM +L++M+
Sbjct: 390 LCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMK 449
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ CKPDKVT TM++ + G+ +H ++
Sbjct: 450 EHRCKPDKVTCTTMIKWFLIKGIDDHRVQY 479
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/334 (69%), Positives = 278/334 (83%), Gaps = 1/334 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQP KAHELFQAMVDEGC N +S+TAL+SAY RSG FD+AFSLL+ MK TP C+
Sbjct: 160 MLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMKATPGCR 219
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIKSCL A+ FDKV+ LL+DM+ GIRPNTVTYNTL+DAYG+A FAEME T
Sbjct: 220 PDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAEMEST 279
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L++MLSE C+PDVWTMN TLRAFG+SGQI+ ME CYEKFQ++GI P+I T+NILLDSYGK
Sbjct: 280 LLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGK 339
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A +EKM AVMEYMQKY+YSWTIVTYN+VIDAFGRAGDL+QMEY+FRLM+S+RIKP+CVT
Sbjct: 340 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVT 399
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LCSL+RAYG A + +K+ +VLR I+NSD LD VFFNCLVDAYGR+ C AEM VL +M+
Sbjct: 400 LCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLVDAYGRVGCLAEMWDVLNMMK 459
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNH-AKEFQDL 333
PDKVT TM++ + G+ +H + +DL
Sbjct: 460 LERVSPDKVTCTTMIKWFLVKGIDDHRVQHLRDL 493
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 233/332 (70%), Gaps = 1/332 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPE+A LF+ M+ EG +TAL+SAYG SG DKAF +E MK+ DC+
Sbjct: 137 MLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCK 196
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIK C FD ++ + ++MS GI +TVTYNT+ID YG+A MF ME +
Sbjct: 197 PDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESS 256
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M+ S C PD++T+N + A+GNSGQI+ MEK Y++FQ GI+P I TFNIL+ SYG
Sbjct: 257 LTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYG 316
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA +EKM +VME+M+K YS TIVT+NIVI+ FGR G++++ME F M+ + +KP+ +
Sbjct: 317 KACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI 376
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG +K+ S+LR I+NSD+ LDT FFNC++ AYG+ M + VM
Sbjct: 377 TYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVM 436
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++R CKPD +T+ TM++AY+ GM A+ +
Sbjct: 437 KERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 157/313 (50%), Gaps = 5/313 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R ++ A + ++ +P TY+ L+ K ++ L M ++G+RP
Sbjct: 104 RENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTL 163
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
Y L+ AYG + + T+ M S DC+PDV+T + ++ G+ D +E+ +
Sbjct: 164 DVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFT 223
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ GI+ S T+N ++D YGKA FE M S++ E ++ I T N I A+G +
Sbjct: 224 EMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNS 283
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G +++ME + + I+P T L+R+YG A EK+ SV+ F+ V F
Sbjct: 284 GQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTF 343
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N +++ +GR+ +M+ M+ +G KP+ +TY ++V AYS G + K+ ++ +
Sbjct: 344 NIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAG---YLKKVDSILRQ 400
Query: 337 MDETCLAMKRPDF 349
++ + + + P F
Sbjct: 401 IENSDVTLDTPFF 413
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ EK E F M +G N+ ++ +L+SAY ++G K S+L ++N+ D
Sbjct: 349 MFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENS-DVT 407
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D ++ ++ + +A +++ L M + +P+ +T+ T+I AY M +
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNL 467
Query: 121 LVKMLS 126
V M++
Sbjct: 468 EVNMIT 473
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 233/332 (70%), Gaps = 1/332 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCKQPE+A LF+ M+ EG +TAL+SAYG SG DKAF +E MK+ DC+
Sbjct: 137 MLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCK 196
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIK C FD ++ + ++MS GI +TVTYNT+ID YG+A MF ME +
Sbjct: 197 PDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESS 256
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M+ S C PD++T+N + A+GNSGQI+ MEK Y++FQ GI+P I TFNIL+ SYG
Sbjct: 257 LTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYG 316
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA +EKM +VME+M+K YS TIVT+NIVI+ FGR G++++ME F M+ + +KP+ +
Sbjct: 317 KACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI 376
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG +K+ S+LR I+NSD+ LDT FFNC++ AYG+ M + VM
Sbjct: 377 TYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVM 436
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++R CKPD +T+ TM++AY+ GM A+ +
Sbjct: 437 KERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 157/313 (50%), Gaps = 5/313 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R ++ A + ++ +P TY+ L+ K ++ L M ++G+RP
Sbjct: 104 RENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTL 163
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
Y L+ AYG + + T+ M S DC+PDV+T + ++ G+ D +E+ +
Sbjct: 164 DVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFT 223
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ GI+ S T+N ++D YGKA FE M S++ E ++ I T N I A+G +
Sbjct: 224 EMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNS 283
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G +++ME + + I+P T L+R+YG A EK+ SV+ F+ V F
Sbjct: 284 GQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTF 343
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N +++ +GR+ +M+ M+ +G KP+ +TY ++V AYS G + K+ ++ +
Sbjct: 344 NIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAG---YLKKVDSILRQ 400
Query: 337 MDETCLAMKRPDF 349
++ + + + P F
Sbjct: 401 IENSDVTLDTPFF 413
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ EK E F M +G N+ ++ +L+SAY ++G K S+L ++N+ D
Sbjct: 349 MFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENS-DVT 407
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D ++ ++ + +A +++ L M + +P+ +T+ T+I AY M +
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNL 467
Query: 121 LVKMLS 126
V M++
Sbjct: 468 EVNMIT 473
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 232/335 (69%), Gaps = 1/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QPE+A LF+ M EG +TAL+SAYG SGL KAFS ++ MK+ DC+
Sbjct: 137 MLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSVSDCK 196
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS+LI C K FD + +LS+MS G+ +TVT+NT+I+ YG+AKMF EME +
Sbjct: 197 PDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKMFREMENS 256
Query: 121 LVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ + PD++T N + A+GNSG+I+ MEK Y +FQ GI P I TFNIL+ SYG
Sbjct: 257 LTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYG 316
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG +EK+++V+E+M+K + T+VTYNI+I+ FGRAGD++ M+ F+ M+ +KP+ +
Sbjct: 317 KAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAI 376
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG K+ S+LR ++NSD++LDT FFNC+++AYG+ +M + M
Sbjct: 377 TYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEM 436
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
++R C PD VT+ TM++AY GM A+ + ++
Sbjct: 437 RERECMPDNVTFATMIQAYRGQGMTEAAQALEKMM 471
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A + E ++ +P TY+ L+ K ++ + L M T+G+RP Y
Sbjct: 108 WKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYT 167
Query: 103 TLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
L+ AYG + + A+ T+ +M S DC+PDV+T + + + D + + +
Sbjct: 168 ALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSY 227
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLK 220
G++ S TFN +++ YGKA F +M + M + S + T+N VI A+G +G ++
Sbjct: 228 LGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIE 287
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ME + + I P T L+++YG AG EK+ SV+ F+ V +N ++
Sbjct: 288 KMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIII 347
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ +GR M + M+ G KP+ +TY ++V AYS G+ VE D
Sbjct: 348 ETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSD 405
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKP 254
KY+ W + DA + K +F L+R + +P C T L+ G +P
Sbjct: 86 KYNRLWPKAVLEALDDAI-KERRWKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQP 144
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ-RGCKPDKVTYRT 313
E+ + + + + LV AYG A+ ++ M+ CKPD TY
Sbjct: 145 EEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSV 204
Query: 314 MV 315
++
Sbjct: 205 LI 206
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 239/335 (71%), Gaps = 1/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML KCKQP++A +L++ M+ EG TAL+SAYG+SGLF AFS +E MK+ DC+
Sbjct: 141 MLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIEDMKSVVDCK 200
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS+LI C K FD ++ +L+DMS GI N+VTYN++ID YG+A MF +ME +
Sbjct: 201 PDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENS 260
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ +E+C+PDV+T+N + ++GN G+ID MEK Y++FQ I+P I TFN+++ SYG
Sbjct: 261 LTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYG 320
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KM +VM++M++ ++ TIVTYN VI+ +G+AG++++M+ F+ M+ +KP+ V
Sbjct: 321 KAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSV 380
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG K+ S+LR ++NSD++LDT FFNC++ AYG++ +M + M
Sbjct: 381 TYCSLVNAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAM 440
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ R C+PD+ T+ M++AY+T G+ AK + ++
Sbjct: 441 RARKCEPDRTTFTCMIQAYNTQGITEAAKNLETMM 475
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A + E ++N +P TY+ L+ K + L M +G++P
Sbjct: 112 WQNALMIFELLRNQYWYEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLT 171
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
L+ AYG++ +F T+ M S DC+PDV+T + + + D +E+
Sbjct: 172 ALVSAYGQSGLFRHAFSTIEDMKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSY 231
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+GI+ + T+N ++D YGKAG FE+M +++ + ++ + + T N +I ++G G +
Sbjct: 232 SGIECNSVTYNSIIDGYGKAGMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKID 291
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ME + + IKP T ++++YG AG +K+ SV+ F++ V +N ++
Sbjct: 292 KMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVI 351
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ YG+ +M + M+ G KP+ VTY ++V AYS G+ VE D
Sbjct: 352 EVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSD 409
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 236/335 (70%), Gaps = 1/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QPE+A LF+ M+ EG +TAL+SAYG+SGL D+AFS +E MK+ DC+
Sbjct: 133 MLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMKSVVDCE 192
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILI+ C K FD ++ +L++MS GI+ N VTYN++ID YG+A MF +M+
Sbjct: 193 PDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDA 252
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ + PDV+T+N + A+GN+GQID MEK Y++FQ GI+P I TFN ++ SYG
Sbjct: 253 LNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSYG 312
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG +EKM VM++M+K ++ TIVTYN VI+ FG+AG++++M+ F M+ +KP+ +
Sbjct: 313 KAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSI 372
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY G +K+ S++R ++NSD++LDT FFNC++ AYG+ +M + M
Sbjct: 373 TYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAM 432
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
++R C+PD +T+ M+++Y+T GM + ++++
Sbjct: 433 RERKCEPDNITFACMIQSYNTQGMTEAVQNLENMM 467
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 134/257 (52%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G N ++ +++ YG++ +F++ L M + PDV T + + + A DK
Sbjct: 225 GIKCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDK 284
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
++ + GI+P+ T+NT+I +YG+A M+ +M+ + M P + T N +
Sbjct: 285 MEKWYDEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIE 344
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
FG +G+I+ M++ + K + G++P+ T+ L+ +Y K G +K+ ++M +++
Sbjct: 345 VFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVL 404
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+N +I A+G+AG+LK+M LF MR + +P +T ++++Y G E + ++
Sbjct: 405 DTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLE 464
Query: 262 RFIDNSDIMLDTVFFNC 278
+ ++ L T C
Sbjct: 465 NMMISAKSSLGTKLIGC 481
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 2/281 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
QP TY+ L+ K ++ L M ++G++P Y L+ AYG++ + +
Sbjct: 121 QPRCRTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFS 180
Query: 120 TLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
T+ M S DCEPDV+T + +R + D +E + GI+ + T+N ++D Y
Sbjct: 181 TVEDMKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGY 240
Query: 179 GKAGHFEKMS-AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GKA FE+M A+ + ++ + + T N + A+G AG + +ME + + IKP
Sbjct: 241 GKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPD 300
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +++++YG AG EK+ +V+ F++ V +N +++ +G+ +M
Sbjct: 301 ITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFL 360
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M+ G KP+ +TY ++V AYS G + VE D
Sbjct: 361 KMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSD 401
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 47/280 (16%)
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
+L DA R + + +E+ + +P T L G Q + +E S
Sbjct: 94 SLDDAIKRCRSHSALEIFALLRKQYWYQPRCRTYAKLLMMLGKCRQPEEASLLFEIMLSE 153
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK--------YHYSWTI----------- 203
G++P+++ + L+ +YG++G ++ + +E M+ Y YS I
Sbjct: 154 GLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMKSVVDCEPDVYTYSILIRCCAKFRRFDL 213
Query: 204 -----------------VTYNIVIDAFGRAGDLKQM-EYLFRLMRSERIKPSCVTLCSLV 245
VTYN +ID +G+A +QM + L ++ + P TL S V
Sbjct: 214 IEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFV 273
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
AYG+AG+ +K+ I D FN ++ +YG+ + +MK V++ M++R
Sbjct: 274 GAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFT 333
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
P VTY T++ + G +EKMD+ L MK
Sbjct: 334 PTIVTYNTVIEVFGKAGE----------IEKMDQHFLKMK 363
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 161/333 (48%), Positives = 233/333 (69%), Gaps = 1/333 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGKCKQPE+A LF+ M EG + +TAL+SAYG+SGL KA S ++ MK+ DC+
Sbjct: 136 LLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSISDCK 195
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV+TYSILI C + FD ++ +L+DMS GI NTVTYNT+I+ +G+AKMF +ME
Sbjct: 196 PDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFEQMESL 255
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M+ D C PD+ T N +RA+GNS QI+ MEK Y++FQ GI+P I T+N ++ SYG
Sbjct: 256 LLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYG 315
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KM +V+ +M+K +S TIVT N +ID+FGRAG++++ME F+ M+ + +KP+ V
Sbjct: 316 KAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSV 375
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AYG +G EK+ S+LR I+NSD++ DT FNCL++ YG+ +M + M
Sbjct: 376 TYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEM 435
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ C PD +T+ TM+RA GM A+ ++
Sbjct: 436 KENKCVPDGITFATMIRALKAQGMTEDAQRLEN 468
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L ++ LK F + Q Q P TY L+ G+ K + L M SE
Sbjct: 106 LWETALKIFGLLRQQ--------QWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEG 157
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKM 187
+P + + A+G SG + ++ +S + +P ++T++IL+D + F+ +
Sbjct: 158 LKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLL 217
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ M + VTYN +I+ FG+A +QME L
Sbjct: 218 KKILADMSCLGITCNTVTYNTIINGFGKAKMFEQMESL---------------------- 255
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+L I++ D + FN + AYG + +M+ + Q G +PD
Sbjct: 256 ------------LLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPD 303
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
TY +M+ +Y GM + K + +EK
Sbjct: 304 IWTYNSMISSYGKAGMYDKMKSVLNFMEK 332
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 36/192 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +Q EK + ++ G + + ++ +++S+YG++G++DK S+L M+ P
Sbjct: 280 GNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKR-FFSPT 338
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY--------------------- 101
+ T + +I S +A ++++ +M QG++PN+VTY
Sbjct: 339 IVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILR 398
Query: 102 --------------NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
N LI+ YG+A +M ++M C PD T +RA G
Sbjct: 399 QIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQG 458
Query: 148 QIDTMEKCYEKF 159
+ ++ K
Sbjct: 459 MTEDAQRLENKL 470
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/335 (48%), Positives = 231/335 (68%), Gaps = 1/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QPE+ LF+ M+ +G +TAL+SAYG+SG DKAFS++ MK +C+
Sbjct: 124 MLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDKAFSIVVEMKAISECK 183
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILI C+K F+ ++ +L++MS GI +TVTYNT+ID YG+AKMF EME T
Sbjct: 184 PDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENT 243
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ S PD++T N + A+G+ G+ID MEK Y +FQ G++ I TFNIL+ SYG
Sbjct: 244 LTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYG 303
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + KM +V+E+M+K +S +IVT+NI I+ FG+AGD++ ME F M+ IKP+ V
Sbjct: 304 KAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTV 363
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG K+ S+LR ++NSD++LDT FFNC++ AYGR +M + M
Sbjct: 364 TYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGM 423
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ R CKPD +T+ TM++AY+ GM A+ ++++
Sbjct: 424 EGRKCKPDSITFATMIQAYNAQGMIEAAQGMENMM 458
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P T TY L+ G+ + E MLS+ +P + + A+G SGQ+D
Sbjct: 113 PRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDKAFSI 172
Query: 156 YEKFQS-AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ ++ + +P + T++IL++ K FE + ++ M + VTYN +ID +G
Sbjct: 173 VVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTIIDGYG 232
Query: 215 RAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+A ++ME L ++ S P T S++ AYG G+ +K+ + D
Sbjct: 233 KAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDI 292
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
FN L+ +YG+ + +M+ VLE M++R P VT+ + + G
Sbjct: 293 KTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAG 341
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 39/260 (15%)
Query: 13 ELFQAMVDE----GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EL + ++ E G + +T ++ ++ YG++ +F++ + L M + PD+ T++
Sbjct: 203 ELIRGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNS 262
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + DK++ ++ G+R + T+N LI +YG+A M+ +M L M
Sbjct: 263 IIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRF 322
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT------------------ 170
P + T N + FG +G I+TME+ + K + GI+P+ T
Sbjct: 323 FSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVD 382
Query: 171 -----------------FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
FN ++ +YG+AG EKMS + M+ +T+ +I A+
Sbjct: 383 SILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMIQAY 442
Query: 214 GRAGDLKQMEYLFRLMRSER 233
G ++ + + +M + R
Sbjct: 443 NAQGMIEAAQGMENMMIATR 462
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 42/199 (21%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LD K +E + E ++K H Y TY ++ G+ ++ +LF +M S+
Sbjct: 86 LDDAIKENQWESALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDG 145
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVL---------------------------RFIDN 266
+KP+ +LV AYG +G+ +K S++ RF
Sbjct: 146 LKPTIDVYTALVSAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELI 205
Query: 267 SDIMLD---------TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK-PDKVTYRTMVR 316
I+ + TV +N ++D YG+ K F EM+ L M + G PD T+ +++
Sbjct: 206 RGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIG 265
Query: 317 AYSTNG----MKNHAKEFQ 331
AY + G M+ EFQ
Sbjct: 266 AYGSKGRIDKMEKWYTEFQ 284
>gi|334185941|ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|332645523|gb|AEE79044.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 499
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 232/332 (69%), Gaps = 1/332 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG CKQP++A LF+ M+ EG +T+L+S YG+S L DKAFS LE+MK+ DC+
Sbjct: 153 VLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCK 212
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T+++LI C K FD V++++ +MS G+ +TVTYNT+ID YG+A MF EME
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ + D PDV T+N + ++GN + ME Y +FQ G+QP I TFNIL+ S+G
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KM +VM++M+K +S T VTYNIVI+ FG+AG +++M+ +FR M+ + +KP+ +
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG K+ SVLR I NSD++LDT FFNC+++AYG+ A MK + M
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++R CKPDK+T+ TM++ Y+ +G+ + +E +
Sbjct: 453 EERKCKPDKITFATMIKTYTAHGIFDAVQELE 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ E + FQ M G + +F L+ ++G++G++ K S+++ M+ V T
Sbjct: 303 RKMESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV-T 358
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I+I++ KA +K+ + M QG++PN++TY +L++AY +A + +++ L +++
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ D D NC + A+G +G + TM++ Y + + +P TF ++ +Y G F+
Sbjct: 419 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 478
Query: 186 KMSAVMEYM 194
+ + + M
Sbjct: 479 AVQELEKQM 487
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 72/266 (27%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP T + GN Q D +E S G++P+I+ + L+ YGK+ +K +
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 190 VMEYMQKYH------YSWTI------------------------------VTYNIVIDAF 213
+EYM+ +++T+ VTYN +ID +
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 214 GRAGDLKQMEYLF--------------------------RLMRSER----------IKPS 237
G+AG ++ME + R MR ++P
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ ++G AG +K+ SV+ F++ L TV +N +++ +G+ +M V
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGM 323
M+ +G KP+ +TY ++V AYS G+
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKAGL 406
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LD K ++ + ++K H Y TY + G Q LF +M SE
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEM 292
+KP+ SL+ YG + +K S L ++ + SD D F L+ +L F +
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
K ++ M G VTY T++ Y GM + D++E D
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGD 281
>gi|75265624|sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 447
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 232/332 (69%), Gaps = 1/332 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG CKQP++A LF+ M+ EG +T+L+S YG+S L DKAFS LE+MK+ DC+
Sbjct: 103 VLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCK 162
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T+++LI C K FD V++++ +MS G+ +TVTYNT+ID YG+A MF EME
Sbjct: 163 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 222
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ + D PDV T+N + ++GN + ME Y +FQ G+QP I TFNIL+ S+G
Sbjct: 223 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 282
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KM +VM++M+K +S T VTYNIVI+ FG+AG +++M+ +FR M+ + +KP+ +
Sbjct: 283 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 342
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV AY AG K+ SVLR I NSD++LDT FFNC+++AYG+ A MK + M
Sbjct: 343 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 402
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++R CKPDK+T+ TM++ Y+ +G+ + +E +
Sbjct: 403 EERKCKPDKITFATMIKTYTAHGIFDAVQELE 434
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ E + FQ M G + +F L+ ++G++G++ K S+++ M+ V T
Sbjct: 253 RKMESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV-T 308
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I+I++ KA +K+ + M QG++PN++TY +L++AY +A + +++ L +++
Sbjct: 309 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 368
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ D D NC + A+G +G + TM++ Y + + +P TF ++ +Y G F+
Sbjct: 369 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 428
Query: 186 KMSAVMEYM 194
+ + + M
Sbjct: 429 AVQELEKQM 437
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 72/266 (27%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP T + GN Q D +E S G++P+I+ + L+ YGK+ +K +
Sbjct: 91 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 150
Query: 190 VMEYMQKYH------YSWTI------------------------------VTYNIVIDAF 213
+EYM+ +++T+ VTYN +ID +
Sbjct: 151 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 210
Query: 214 GRAGDLKQMEYLF--------------------------RLMRSER----------IKPS 237
G+AG ++ME + R MR ++P
Sbjct: 211 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 270
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ ++G AG +K+ SV+ F++ L TV +N +++ +G+ +M V
Sbjct: 271 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 330
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGM 323
M+ +G KP+ +TY ++V AYS G+
Sbjct: 331 KMKYQGVKPNSITYCSLVNAYSKAGL 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LD K ++ + ++K H Y TY + G Q LF +M SE
Sbjct: 65 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 124
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEM 292
+KP+ SL+ YG + +K S L ++ + SD D F L+ +L F +
Sbjct: 125 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 184
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
K ++ M G VTY T++ Y GM + D++E D
Sbjct: 185 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGD 231
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + EK ++F+ M +G N+ ++ +L++AY ++GL K S+L + N+ D
Sbjct: 316 FGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS-DVVL 374
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D ++ +I + +A ++ L M + +P+ +T+ T+I Y +F ++
Sbjct: 375 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELE 434
Query: 122 VKMLSEDCEPDV 133
+M+S D+
Sbjct: 435 KQMISSGENLDI 446
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 229/344 (66%), Gaps = 1/344 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+AM+ E +TAL+ AYG SGL D+A + +E MK DC+
Sbjct: 135 MLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGLLDEALAAVEQMKGAADCK 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S+LI C K+ FD + A+L +MS GI N+V +N +ID YG+A MF EME
Sbjct: 195 PDGYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGA 254
Query: 121 LVKMLSEDCE-PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML PD++TMN + A+GN G+ D MEK Y +FQ G++P TFNI++ SYG
Sbjct: 255 LSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKSYG 314
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KM ++ YM+K +S T VT+N VI+ FGRAG++++MEY FRLM+ + +KP+ +
Sbjct: 315 KAGMYDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPI 374
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV Y AG +K+ ++R +N++++LDT FFNC++ AY + M+ +L++M
Sbjct: 375 TYCSLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLM 434
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+++ CKPDK+TY TM++AY+ GM A+ + E+ D+ L+
Sbjct: 435 KEKKCKPDKITYATMIQAYTAQGMDEAARLLEMEAERFDKRLLS 478
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 42/199 (21%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LDS A +E + E ++K H Y TY ++ G+ LF+ M SER
Sbjct: 97 LDSAVAACRWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSER 156
Query: 234 IKPSCVTLCSLVRAYGHAG------------------KPEK------------------L 257
++P+ +LV AYG++G KP+ +
Sbjct: 157 LRPTADVYTALVGAYGYSGLLDEALAAVEQMKGAADCKPDGYTFSVLINCCAKSRRFDLI 216
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK-PDKVTYRTMVR 316
+VL + I ++V N ++D YG+ F EM+G L M + G PD T +++
Sbjct: 217 PAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIG 276
Query: 317 AYSTNG----MKNHAKEFQ 331
AY +G M+ EFQ
Sbjct: 277 AYGNHGRTDEMEKSYSEFQ 295
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 225/344 (65%), Gaps = 1/344 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+ M+ E +TAL+ AYG SGL + A + +E MK DC+
Sbjct: 134 MLGKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHALAAVEQMKGAADCK 193
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S+L+ C K+ FD + A+L +MS GI N+V +N +ID YG+A MF EME
Sbjct: 194 PDGYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGA 253
Query: 121 LVKMLSEDCE-PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML PD++TMN + A+GN G+ D MEK Y +FQ G++P TFNI++ SYG
Sbjct: 254 LSTMLESGSNVPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYG 313
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + KM ++ YM+K +S T VT+N VI+ FGRAGD+++MEY FRLM+ + +KP+ +
Sbjct: 314 KAGMYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPI 373
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSLV Y AG +K+ V+R +N++++LDT FFNC++ AY + M+ +L++M
Sbjct: 374 TYCSLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLM 433
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+++ CKPD++TY TM++AY+ +GM A + E+ D+ L
Sbjct: 434 KEKRCKPDRITYATMIQAYTAHGMDEAAMLLEIEAERFDKRLLG 477
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 42/199 (21%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LDS A +E + E ++K H Y TY ++ G+ LFR M SER
Sbjct: 96 LDSAVAACRWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAGLFREMLSER 155
Query: 234 IKPSCVTLCSLVRAYGHAG------------------KPEK------------------L 257
++P+ +L+ AYG++G KP+ +
Sbjct: 156 LRPTADVYTALIGAYGYSGLLEHALAAVEQMKGAADCKPDGYTFSVLVDCCAKSRRFDLI 215
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK-PDKVTYRTMVR 316
+VL + I ++V N ++D YG+ F EM+G L M + G PD T ++V
Sbjct: 216 PAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSTMLESGSNVPDIYTMNSVVG 275
Query: 317 AYSTNG----MKNHAKEFQ 331
AY +G M+ EFQ
Sbjct: 276 AYGNHGRTDEMEKSYSEFQ 294
>gi|357479161|ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/326 (48%), Positives = 213/326 (65%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP++AH+LF AM++EGCD + +TALL+AY RS + D+A S+L+ MKN P CQ
Sbjct: 147 LLGKSGQPQRAHQLFTAMIEEGCDPTPELYTALLAAYCRSNMIDEALSILDEMKNHPLCQ 206
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LIK+C+ F F+ ++ L +M+ + I PNTVT N +++ YG+A MF +ME
Sbjct: 207 PDVFTYSTLIKACVDIFKFELIELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKV 266
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S DC+PDVWTMN + FGN GQID MEK YEKF++ GI+P TFNIL+ SYG
Sbjct: 267 LSGMLQSADCKPDVWTMNTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYG 326
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF AGD K MEY F MRSE ++
Sbjct: 327 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTK 386
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L++ + +AG K+ S ++ +I L+T F+N ++ A + + EM V M
Sbjct: 387 TFCCLIKGFANAGLFHKVISSVQLAAKLEIPLNTAFYNAVLSACAKAEDLMEMDRVFMRM 446
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C D TY MV AY GM +
Sbjct: 447 KDTQCPLDDTTYSIMVEAYRKEGMND 472
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 2/281 (0%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A L+ ++ QP TY LI K+ + L + M +G P Y L
Sbjct: 120 QALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCDPTPELYTAL 179
Query: 105 IDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
+ AY R+ M E L +M + C+PDV+T + ++A + + + +E YE+
Sbjct: 180 LAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKFELIELLYEEMAQRS 239
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
I P+ T NI+L+ YGKAG F++M V+ M Q + T N +I FG G + M
Sbjct: 240 IMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGNMGQIDMM 299
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E + R+ I+P T L+ +YG +K+ SV+ ++ T +N +++A
Sbjct: 300 EKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 359
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ M+ M+ G + D T+ +++ ++ G+
Sbjct: 360 FAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGL 400
>gi|125542133|gb|EAY88272.1| hypothetical protein OsI_09727 [Oryza sativa Indica Group]
Length = 450
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 226/329 (68%), Gaps = 2/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+ M+ E +TAL+ AYG SGL D+A + +E MK DC+
Sbjct: 98 MLGKCRQPGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDEALATVEQMKGVADCK 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S+LI C K FD++ A+L +MS G++ N V +N +ID YG+A M EME
Sbjct: 158 PDEYTFSVLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENA 217
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ML + D PD++TMN + A+GN G +I ME+ Y +FQ G++P TFNI++ SY
Sbjct: 218 LTSMLEDGDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSY 277
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G A +KM +V++YM+K+ +S T+VT+NI+I++FGRAG++++MEY FRLM+ + +KP+
Sbjct: 278 GNAKMHDKMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNP 337
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T CSLV Y AG +K+ ++R +N+D++LDT FFNC++DAY + M+ +L++
Sbjct: 338 ITYCSLVNGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQL 397
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M+++ CKPDKVTY TM++AY+ +GM A
Sbjct: 398 MKEKKCKPDKVTYTTMIQAYNVHGMDEAA 426
>gi|27476102|gb|AAO17033.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108705848|gb|ABF93643.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584686|gb|EAZ25350.1| hypothetical protein OsJ_09164 [Oryza sativa Japonica Group]
Length = 450
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 226/329 (68%), Gaps = 2/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+ M+ E +TAL+ AYG SGL D+A + +E MK DC+
Sbjct: 98 MLGKCQQPGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDQALATVEQMKGVADCK 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S+LI C K FD++ A+L +MS G++ N V +N +ID YG+A M EME
Sbjct: 158 PDEYTFSVLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENA 217
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ML + D PD++TMN + A+GN G +I ME+ Y +FQ G++P TFNI++ SY
Sbjct: 218 LTSMLEDGDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSY 277
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G A +KM +V++YM+K+ +S T+VT+NI+I++FGRAG++++MEY FRLM+ + +KP+
Sbjct: 278 GNAKMHDKMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNP 337
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T CSLV Y AG +K+ ++R +N+D++LDT FFNC++DAY + M+ +L++
Sbjct: 338 ITYCSLVNGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQL 397
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M+++ CKPDKVTY TM++AY+ +GM A
Sbjct: 398 MKEKKCKPDKVTYTTMIQAYNVHGMDEAA 426
>gi|115450301|ref|NP_001048751.1| Os03g0115300 [Oryza sativa Japonica Group]
gi|113547222|dbj|BAF10665.1| Os03g0115300 [Oryza sativa Japonica Group]
Length = 442
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 226/329 (68%), Gaps = 2/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+ M+ E +TAL+ AYG SGL D+A + +E MK DC+
Sbjct: 98 MLGKCQQPGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDQALATVEQMKGVADCK 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S+LI C K FD++ A+L +MS G++ N V +N +ID YG+A M EME
Sbjct: 158 PDEYTFSVLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENA 217
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ML + D PD++TMN + A+GN G +I ME+ Y +FQ G++P TFNI++ SY
Sbjct: 218 LTSMLEDGDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSY 277
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G A +KM +V++YM+K+ +S T+VT+NI+I++FGRAG++++MEY FRLM+ + +KP+
Sbjct: 278 GNAKMHDKMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNP 337
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T CSLV Y AG +K+ ++R +N+D++LDT FFNC++DAY + M+ +L++
Sbjct: 338 ITYCSLVNGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQL 397
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M+++ CKPDKVTY TM++AY+ +GM A
Sbjct: 398 MKEKKCKPDKVTYTTMIQAYNVHGMDEAA 426
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 214/338 (63%), Gaps = 1/338 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AHELF MV+EGC+ T+ +TALL++Y RS L D+AFS+L MK P CQ
Sbjct: 153 LLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQ 212
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ V++L +M + I PNTVT N ++ YG+A F EME
Sbjct: 213 PDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKV 272
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI+ MEK YEKF++ GI+P TFNIL+ +YG
Sbjct: 273 LSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYG 332
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E +K
Sbjct: 333 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTK 392
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+R Y +AG K+ S ++ +I +T F+N ++ A + + EM+ V M
Sbjct: 393 TFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRM 452
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + C+PD TY MV AY GM + + + ++M
Sbjct: 453 KDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRM 490
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 214/338 (63%), Gaps = 1/338 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AHELF MV+EGC+ T+ +TALL++Y RS L D+AFS+L MK P CQ
Sbjct: 153 LLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQ 212
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ V++L +M + I PNTVT N ++ YG+A F EME
Sbjct: 213 PDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKV 272
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI+ MEK YEKF++ GI+P TFNIL+ +YG
Sbjct: 273 LSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYG 332
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E +K
Sbjct: 333 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTK 392
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+R Y +AG K+ S ++ +I +T F+N ++ A + + EM+ V M
Sbjct: 393 TFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRM 452
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + C+PD TY MV AY GM + + + ++M
Sbjct: 453 KDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRM 490
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G Q E + ++ + G + T++F L+ AYG+ ++DK S++E+M+
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFP 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+TY+ +I++ ++ M +G++ +T T+ LI Y A +F ++ ++
Sbjct: 354 WTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKV-VS 412
Query: 121 LVKMLSEDCEPDVWTM-NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
V++ + P+ + N + A + + ME+ + + + QP T++I++++Y
Sbjct: 413 SVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYK 472
Query: 180 KAGHFEKMSAVMEYMQK----YHYSWTIVTYNIVIDAFG 214
K G +K+ + + Q+ YH S ++ +D G
Sbjct: 473 KEGMNDKIYDLEQERQRMMCSYHLSICMICMKYCLDPPG 511
>gi|255556562|ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541630|gb|EEF43179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP++AH+LF MV+EG + + +TALL+AY R+ L D+AFS+L+ MK P C
Sbjct: 139 LLGRTGQPQRAHQLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFSILQQMKTLPRCL 198
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ V+AL +M + I PNTVT N ++ YG+A M+ +ME
Sbjct: 199 PDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMERV 258
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +C+PDVWTMN L FGN GQID MEK YEKF+S GI+P TFNIL+ +YG
Sbjct: 259 LSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAYG 318
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VME+M+K + WT TYN VI+AF AGD+K MEY F MR+E +K
Sbjct: 319 KKRMYDKMSSVMEFMRKLQFPWTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMKADTK 378
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S ++ +I +T F+N ++ A + + EM+ V + M
Sbjct: 379 TFCCLINGYANAGLFHKVISSVQLATKFEIPENTTFYNAIISACAKAEDLMEMERVFKRM 438
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY MV AY GM +
Sbjct: 439 KDNQCQPDSTTYSIMVEAYKREGMND 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A + E +K P P TY L+ + + L +M +GI P Y L
Sbjct: 112 QALEVFEMLKEQPFYHPKEGTYMKLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELYTAL 171
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+ AY R + E AF Q+ T+ +C
Sbjct: 172 LAAYCRNHLTDE-------------------------AFSILQQMKTLPRCL-------- 198
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P + T++ LL + A FE + A+ + M + + VT NIV+ +G+AG QME
Sbjct: 199 -PDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMER 257
Query: 225 LFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ ++ S KP T+ ++ +G+ G+ + + + I +T FN L+ AY
Sbjct: 258 VLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAY 317
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
G+ + + +M V+E M++ TY ++ A++ G H
Sbjct: 318 GKKRMYDKMSSVMEFMRKLQFPWTTSTYNNVIEAFAVAGDVKH 360
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 70/284 (24%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV----- 63
E L+Q M + NT + +LS YG++G++D+ +L M + +C+PDV
Sbjct: 218 ELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMERVLSGMLESTECKPDVWTMNI 277
Query: 64 ------------------------------NTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
T++ILI + K +DK+ +++ M
Sbjct: 278 ILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVMEFMRKLQ 337
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
T TYN +I+A+ A ME T +M +E + D T C
Sbjct: 338 FPWTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMKADTKTFCC--------------- 382
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
L++ Y AG F K+ + ++ K+ YN +I A
Sbjct: 383 --------------------LINGYANAGLFHKVISSVQLATKFEIPENTTFYNAIISAC 422
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+A DL +ME +F+ M+ + +P T +V AY G +K+
Sbjct: 423 AKAEDLMEMERVFKRMKDNQCQPDSTTYSIMVEAYKREGMNDKV 466
>gi|224112076|ref|XP_002316075.1| predicted protein [Populus trichocarpa]
gi|222865115|gb|EEF02246.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/326 (46%), Positives = 208/326 (63%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+C QP++AH+LF MV+EG + T+ +TALL+AY R+ L D+ FS++ MK+ P CQ
Sbjct: 96 LLGRCGQPQRAHQLFDEMVEEGIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQ 155
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ + L +M + I PNTVT N ++ YGR M+ +ME
Sbjct: 156 PDVYTYSTLLKACVDASRFELIDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERV 215
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +ML S C+PDVWTMN L FGN GQID ME+ YEKF++ GI+P TFNIL+ +YG
Sbjct: 216 LSEMLESAACKPDVWTMNIILSVFGNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYG 275
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E +K
Sbjct: 276 KKRMYDKMSSVMEYMRKVQFPWTTSTYNNVIEAFADVGDAKNMEYAFDQMRAESMKADTK 335
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S ++ +I +T FFN ++ A + EM+ V + M
Sbjct: 336 TFCCLINGYANAGLFHKVISSVQLAAKFEIPENTSFFNAVISACAKADDLMEMERVFKRM 395
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + C PD TY MV AY GM +
Sbjct: 396 KDKQCPPDSRTYSIMVEAYRKEGMND 421
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 117/244 (47%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L+Q M + NT + +LS YGR G++D+ +L M + C+PDV T +I++
Sbjct: 180 LYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIILSVF 239
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
D ++ GI P T T+N LI AYG+ +M+ +M + M
Sbjct: 240 GNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTT 299
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + AF + G ME +++ ++ ++ TF L++ Y AG F K+ + ++
Sbjct: 300 STYNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQL 359
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
K+ +N VI A +A DL +ME +F+ M+ ++ P T +V AY G
Sbjct: 360 AAKFEIPENTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYSIMVEAYRKEGM 419
Query: 254 PEKL 257
+K+
Sbjct: 420 NDKI 423
>gi|357120957|ref|XP_003562190.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Brachypodium distachyon]
Length = 454
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/330 (46%), Positives = 222/330 (67%), Gaps = 2/330 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
MLGKC+QP A LF+ M+ E A T +TAL+ AYG SG+ D+A + +E MK DC
Sbjct: 102 MLGKCRQPGPAAALFRVMLSEERLAPTVDVYTALVGAYGYSGMLDEALATVELMKGAADC 161
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD T+SILI C K+ FD + +L +MS GI N V +N +ID YG+A M AEM
Sbjct: 162 KPDEYTFSILINCCCKSRRFDLIPPVLDEMSYLGIGCNVVIHNAIIDGYGKAGMLAEMGT 221
Query: 120 TLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ML + D PD++TMN + A+GN G++D MEK Y +FQ G++P TFNI++ SY
Sbjct: 222 ALCNMLEDGDNVPDIYTMNSIIWAYGNRGRVDDMEKWYSEFQLMGVEPDSRTFNIMIKSY 281
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GKA EKM V++YM++ +S T T+NI+I+ FGRAGD+++MEY FRLM+ + IKP+
Sbjct: 282 GKANMHEKMMMVLKYMKRRFFSPTAATFNIIIECFGRAGDIEKMEYYFRLMKIQGIKPNP 341
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T CSLV Y AG +K+ +++R +N+D++LDT FFNC+++AY + M+ +L++
Sbjct: 342 ITYCSLVNGYSKAGILDKVPAIIRQTENTDVVLDTPFFNCVINAYAKSGDIKIMEEMLQL 401
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
M+++ CKP KV Y TM++AY +GM AK
Sbjct: 402 MKEKKCKPGKVIYTTMIQAYIAHGMDEAAK 431
>gi|356565453|ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 207/326 (63%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AH+LF M++EG + + +TALL+AY RS + D+AFS+L MK P CQ
Sbjct: 135 LLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPRCQ 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LIK C+ AF FD V+ L +M+ + I PNTVT N ++ YG+A MF +ME
Sbjct: 195 PDVFTYSTLIKVCVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKV 254
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN + FGN GQID MEK YEKF+ GI+P TFNIL+ +YG
Sbjct: 255 LSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILIGAYG 314
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF AGD K ME F MR+E +K
Sbjct: 315 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMKADTK 374
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLC L+ Y +AG K+ S +R +I + F+N ++ A + + EM+ V + M
Sbjct: 375 TLCCLINGYANAGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRM 434
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY M+ AY GM +
Sbjct: 435 KDSQCQPDDTTYTIMIEAYRKEGMND 460
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 37/304 (12%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + T LS + + +A + + ++ QP TY LI K+ +
Sbjct: 88 AWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTYMKLIVLLGKSGQPHRAHQ 147
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAF 143
L + M +G+ P Y L+ AY R+ M E L +M C+PDV+T + ++
Sbjct: 148 LFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKVC 207
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
++ + D +E YE+ I P+
Sbjct: 208 VDAFKFDLVELLYEEMAERSIMPNT----------------------------------- 232
Query: 204 VTYNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VT NIV+ +G+AG QME L ++ S KP T+ +++ +G+ G+ + +
Sbjct: 233 VTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMMEKWYE 292
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I +T FN L+ AYG+ + + +M V+E M++ TY ++ A++ G
Sbjct: 293 KFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAG 352
Query: 323 MKNH 326
H
Sbjct: 353 DAKH 356
>gi|356564951|ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 206/326 (63%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AH+LF M++EG + + +TALL+AY RS + D+AFS+L MK P CQ
Sbjct: 135 LLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPLCQ 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LIK C+ AF FD VQ L +M+ + I PNTVT N ++ YG+A MF +ME
Sbjct: 195 PDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKV 254
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN + FGN GQID EK YEKF+ GI+P TFNIL+ +YG
Sbjct: 255 LSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILIGAYG 314
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF AGD K ME F MR+E +K
Sbjct: 315 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMKADTK 374
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
TLC L+ Y +AG K+ S +R +I + F+N ++ A + + EM+ V + M
Sbjct: 375 TLCCLINGYANAGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRM 434
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY M+ AY GM +
Sbjct: 435 KDSQCQPDDTTYTIMIEAYRKEGMND 460
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 43/307 (14%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + T LS + + +A + + ++ QP T LI K+ +
Sbjct: 88 AWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQ 147
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAF 143
L + M +G+ P Y L+ AY R+ M E L +M C+PDV+T + ++
Sbjct: 148 LFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVC 207
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
++ + D ++ YE+ I P+
Sbjct: 208 VDAFKFDLVQLLYEEMAERSITPNT----------------------------------- 232
Query: 204 VTYNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGK---PEKLGS 259
VT NIV+ +G+AG QME L +++S KP T+ +++ +G+ G+ EK
Sbjct: 233 VTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMTEKWYE 292
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
R+ I +T FN L+ AYG+ + + +M V+E M++ TY ++ A++
Sbjct: 293 KFRYFG---IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFA 349
Query: 320 TNGMKNH 326
G H
Sbjct: 350 DAGDAKH 356
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 200/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +AH+LF M+ +GC +TAL+ AY RSGL D A LL MK +P CQ
Sbjct: 215 LLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGSPLCQ 274
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD + + DM+ + I PNTVT N ++ YG+A +ME
Sbjct: 275 PDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKV 334
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN GQ++ MEK YEKF+S GI+P T NIL+ +YG
Sbjct: 335 LSDMLDSTACKPDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYG 394
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVMEYM+K + WT TYN VI+AF AGD K ME+ F MRSE +KP
Sbjct: 395 KKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTK 454
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + AG+ K+ +++ + D+ +T F N ++ A R EM+ V M
Sbjct: 455 TFCCLINGFSKAGQFHKVVGMVKLAERLDVPANTSFHNAILGACARADDLMEMERVFRHM 514
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C PD VTY +V AY GM +
Sbjct: 515 KHTQCDPDAVTYSILVEAYRKEGMTD 540
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + E +K P P T+ LI ++ + L +M QG +P Y
Sbjct: 186 WQEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYT 245
Query: 103 TLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R+ + + L M S C+PDV+T + ++A ++ + D ++ Y+
Sbjct: 246 ALIGAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAE 305
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
I P+ T NI+L YGKAG + M V+ + + + T NI++ FG G ++
Sbjct: 306 RSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLFGNKGQVE 365
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
ME + RS I+P TL L+ AYG +K+ +V+ ++ T +N ++
Sbjct: 366 LMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVI 425
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+A+ M+ M+ G KPD T+ ++ +S G + L E++D
Sbjct: 426 EAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERLD 483
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 37/178 (20%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------- 55
EK +E F++ G + T++ L+ AYG+ ++DK +++E+M+
Sbjct: 368 EKWYEKFRSY---GIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNV 424
Query: 56 ---------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ +PD T+ LI KA F KV ++ +
Sbjct: 425 IEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERLDV 484
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
NT +N ++ A RA EME M C+PD T + + A+ G D +
Sbjct: 485 PANTSFHNAILGACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGMTDKI 542
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 225/332 (67%), Gaps = 12/332 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG CKQP++A LF+ M+ EG +T+L++ YG+S L DKAFS LE+MK+ DC+
Sbjct: 103 VLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFSTLEYMKSVSDCK 162
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T+++LI+ C K FD V+ ++ +MS G+ +TVTYNT+ID YG+A MF EME
Sbjct: 163 PDVFTFTVLIRCCCKLGRFDLVKRIILEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMENV 222
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M+ + D PDV+T+N + G+S + + G P I TFNIL+ S+G
Sbjct: 223 LADMIEDGDSLPDVFTLNSII---GSSEMV--------AHEEDGELPDITTFNILILSFG 271
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++KMS+VM++M+K +S T VTYNIVI+ FG+AG +++M+ +FR M+ + +KP+ +
Sbjct: 272 KAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNSI 331
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ CSLV AY AG K+ S+LR I NSD++LDT FFNC+++AYG+ A MK + M
Sbjct: 332 SYCSLVNAYSKAGLVGKIDSILRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 391
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++R CKPDK+T+ TM++ Y +G+ + +E +
Sbjct: 392 EERKCKPDKITFATMIKTYKAHGIFDAVQELE 423
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 61/255 (23%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP T + GN Q D +E S G++P+I+ + L+ YGK+ +K +
Sbjct: 91 EPKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFS 150
Query: 190 VMEYMQKYH------YSWTI------------------------------VTYNIVIDAF 213
+EYM+ +++T+ VTYN +ID +
Sbjct: 151 TLEYMKSVSDCKPDVFTFTVLIRCCCKLGRFDLVKRIILEMSYLGVGCSTVTYNTIIDGY 210
Query: 214 GRAGDLKQMEYLFRLM------------------RSERIK-------PSCVTLCSLVRAY 248
G+AG ++ME + M SE + P T L+ ++
Sbjct: 211 GKAGMFEEMENVLADMIEDGDSLPDVFTLNSIIGSSEMVAHEEDGELPDITTFNILILSF 270
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AG +K+ SV+ F++ L TV +N +++ +G+ +M V M+ +G KP+
Sbjct: 271 GKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNS 330
Query: 309 VTYRTMVRAYSTNGM 323
++Y ++V AYS G+
Sbjct: 331 ISYCSLVNAYSKAGL 345
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
AHE ++G + +F L+ ++G++G++ K S+++ M+ V TY+I+I
Sbjct: 250 AHE------EDGELPDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTV-TYNIVI 302
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ KA +K+ + M QG++PN+++Y +L++AY +A + +++ L ++++ D
Sbjct: 303 ETFGKAGKIEKMDDVFRKMKYQGVKPNSISYCSLVNAYSKAGLVGKIDSILRQIVNSDVV 362
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D NC + A+G +G + TM++ Y + + +P TF ++ +Y G F+ + +
Sbjct: 363 LDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYKAHGIFDAVQEL 422
Query: 191 MEYM 194
+ M
Sbjct: 423 EKQM 426
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LD K ++ + ++K H Y TY + G Q LF +M SE
Sbjct: 65 LDEAIKENRWQSALKIFHLLRKQHWYEPKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 124
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEM 292
+KP+ SL+ YG + +K S L ++ + SD D F L+ +L F +
Sbjct: 125 LKPTIDVYTSLIAVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCCCKLGRFDLV 184
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
K ++ M G VTY T++ Y GM + D++E D
Sbjct: 185 KRIILEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMENVLADMIEDGD 231
>gi|293330977|ref|NP_001169349.1| uncharacterized protein LOC100383216 [Zea mays]
gi|30961817|gb|AAP37977.1| PPR2 [Zea mays]
gi|224028857|gb|ACN33504.1| unknown [Zea mays]
gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide repeat 2 [Zea mays]
Length = 571
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 202/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +AH+LF M+ +GC + +TAL+ AY RSGL D+A LL MK++P CQ
Sbjct: 226 LLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSSPLCQ 285
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD A+ DM+ + I PNTVT N ++ YG+A +ME
Sbjct: 286 PDVYTYSTIIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERV 345
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN G+++ ME+ YEKF+ G++P T NIL+ +YG
Sbjct: 346 LSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYG 405
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVME+M+K + WT TYN VI+AF AGD ME+ F MRSE ++P
Sbjct: 406 KRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTK 465
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + AG+ K+ +++ + D+ ++T F N ++ A R EM+ V M
Sbjct: 466 TFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRM 525
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY +V AY GM +
Sbjct: 526 KHTQCEPDASTYSILVEAYRKEGMTD 551
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + E +K P P TY LI ++ + L +M QG +P Y
Sbjct: 197 WQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYT 256
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R+ + E L M S C+PDV+T + ++A ++ + D + Y+
Sbjct: 257 ALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAE 316
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
I P+ T NI+L YGKAG + M V+ + + + T NI++ FG G+++
Sbjct: 317 RSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVE 376
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
ME + R ++P TL L+ AYG +K+ +V+ + T +N ++
Sbjct: 377 LMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVI 436
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+A+ M+ M+ G +PD T+ ++ +S G + L E++D
Sbjct: 437 EAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLD 494
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 41/186 (22%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYS 67
E+ +E F+ G + T++ L+ AYG+ ++DK +++EHM+ P TY+
Sbjct: 379 ERWYEKFRGY---GVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKL--AFPWTTATYN 433
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------------- 114
+I++ +A ++ + M ++G+RP+T T+ LID + RA F
Sbjct: 434 NVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERL 493
Query: 115 ----------------------AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
EME +M CEPD T + + A+ G D +
Sbjct: 494 DVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKI 553
Query: 153 EKCYEK 158
+++
Sbjct: 554 YALHQE 559
>gi|195616496|gb|ACG30078.1| PPR2 [Zea mays]
Length = 580
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 201/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +AH+LF M+ +GC + +TAL+ AY RSGL D+A LL MK++P CQ
Sbjct: 235 LLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSSPLCQ 294
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD A+ DM+ + I PNTVT N ++ YG+A +ME
Sbjct: 295 PDVYTYSTIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERV 354
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN G+++ ME+ YEKF+ G++P T NIL+ +YG
Sbjct: 355 LSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYG 414
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVME+M+K + WT TYN VI+AF AGD ME+ F MRSE ++P
Sbjct: 415 KRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTK 474
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + AG+ K+ +++ + D+ +T F N ++ A R EM+ V M
Sbjct: 475 TFCCLIDGFSRAGQFHKVVGMVKLAERLDVPANTPFHNAVLGACARADDLVEMERVFRRM 534
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY +V AY GM +
Sbjct: 535 KHTQCEPDASTYSILVEAYRKEGMTD 560
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + E +K P P TY LI ++ + L +M QG +P Y
Sbjct: 206 WQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYT 265
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R+ + E L M S C+PDV+T + ++A ++ + D + Y+
Sbjct: 266 ALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAE 325
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
I P+ T NI+L YGKAG + M V+ + + + T NI++ FG G+++
Sbjct: 326 RSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVE 385
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
ME + R ++P TL L+ AYG +K+ +V+ + T +N ++
Sbjct: 386 LMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVI 445
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+A+ M+ M+ G +PD T+ ++ +S G + L E++D
Sbjct: 446 EAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLD 503
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYS 67
E+ +E F+ G + T++ L+ AYG+ ++DK +++EHM+ P TY+
Sbjct: 388 ERWYEKFRGY---GVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKL--AFPWTTATYN 442
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------------- 114
+I++ +A ++ + M ++G+RP+T T+ LID + RA F
Sbjct: 443 NVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERL 502
Query: 115 ----------------------AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
EME +M CEPD T + + A+ G D +
Sbjct: 503 DVPANTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKI 562
>gi|218192673|gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
Length = 588
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 203/326 (62%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +A LF M+ +GC + +TAL++AY R+GL D AF LL MK +P CQ
Sbjct: 156 LLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQ 215
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD V A+ DM+ + I PNTVT N ++ YGRA +ME
Sbjct: 216 PDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKV 275
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI++MEK YEKF+ GI+P T NIL+ +YG
Sbjct: 276 LSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYG 335
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVMEYM+K + WT T+N VI+AF AGD K ME+ F MR+E +KP
Sbjct: 336 KKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTK 395
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ +G+AG K+ +++ + + +DT F N ++ A + + EM+ V M
Sbjct: 396 TFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMACVKAEDLMEMERVFMRM 455
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+Q C PD TY +V AY GM +
Sbjct: 456 KQIQCVPDATTYSILVGAYRKEGMTD 481
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 8/300 (2%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + + +K P P T+ L+ ++ + + L +M QG +P Y
Sbjct: 127 WQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYT 186
Query: 103 TLIDAYGRAKMFAEMELTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R + + L M S C+PDV+T + ++A ++ + D ++ Y+
Sbjct: 187 ALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMAD 246
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS----WTIVTYNIVIDAFGRAG 217
I P+ T NI+L YG+AG + M V+ M S WT+ NI++ FG G
Sbjct: 247 RSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTM---NIILSLFGNRG 303
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ ME + R I+P TL L+ AYG +K+ +V+ ++ T FN
Sbjct: 304 QIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFN 363
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++A+ M+ M+ G KPD T+ ++ + G+ + L E++
Sbjct: 364 NVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERL 423
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 20/287 (6%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M D NT + +LS YGR+G D +L M ++ +PDV T +I++
Sbjct: 240 MYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLF 299
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ ++ GI P T T N LI AYG+ +M+ +M + M
Sbjct: 300 GNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTT 359
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + AF ++G ME + + ++ G++P TF L++ +G AG F K+ +++
Sbjct: 360 ATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKL 419
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ +N V+ A +A DL +ME +F M+ + P T LV AY G
Sbjct: 420 AERLGVPMDTTFHNAVLMACVKAEDLMEMERVFMRMKQIQCVPDATTYSILVGAYRKEGM 479
Query: 254 PEK--------------------LGSVLRFIDNSDIMLDTVFFNCLV 280
+K +G ++ + + DI++D V C+
Sbjct: 480 TDKIYVLQQENPTLVPTDLVHYLIGIRIKLVVSPDILIDFVVDGCIT 526
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 208/346 (60%), Gaps = 1/346 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +A +LF M++EG + + +TALL+AY RS L D AFS+L+ MK P CQ
Sbjct: 133 LLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDTMKGLPQCQ 192
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A FD V +L +M + I PNTVT N ++ YGR F +ME
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN G+ID ME YEKF++ GI+P TFNIL+ SYG
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN +I+AF GD K ME F MRSE +K
Sbjct: 313 KKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTK 372
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S ++ +I +T F+N ++ A + EM+ V M
Sbjct: 373 TFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIAACAKADDLIEMERVYTRM 432
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
++R C D T+ MV AY GM + + +K+ + +A K
Sbjct: 433 KERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRAVATK 478
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 2/281 (0%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A + + ++ QP TY L+ K+ ++ Q L +M +G+ P Y L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 105 IDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
+ AY R+ + + L M C+PDV+T + L+A ++ Q D ++ Y++
Sbjct: 166 LAAYTRSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
I P+ T NI+L YG+ G F++M V+ + + + T NI++ FG G + M
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E + R+ I+P T L+ +YG +K+ SV+ ++ + T +N +++A
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + M+ + M+ G K D T+ ++ Y+ G+
Sbjct: 346 FADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
>gi|115452625|ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|108707769|gb|ABF95564.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707770|gb|ABF95565.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707771|gb|ABF95566.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|113548384|dbj|BAF11827.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|125586018|gb|EAZ26682.1| hypothetical protein OsJ_10586 [Oryza sativa Japonica Group]
gi|215686360|dbj|BAG87621.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741099|dbj|BAG97594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767065|dbj|BAG99293.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767110|dbj|BAG99338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 202/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +A LF M+ +GC + +TAL++AY R+GL D AF LL MK +P CQ
Sbjct: 156 LLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQ 215
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD V A+ DM+ + I PNTVT N ++ YGRA +ME
Sbjct: 216 PDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKV 275
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI++MEK YEKF+ GI+P T NIL+ +YG
Sbjct: 276 LSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYG 335
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVMEYM+K + WT T+N VI+AF AGD K ME+ F MR+E +KP
Sbjct: 336 KKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTK 395
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ +G+AG K+ +++ + + +DT F N ++ + + EM+ V M
Sbjct: 396 TFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRM 455
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+Q C PD TY +V AY GM +
Sbjct: 456 KQIQCIPDATTYSILVGAYRKEGMTD 481
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 8/300 (2%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + + +K P P T+ L+ ++ + + L +M QG +P Y
Sbjct: 127 WQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYT 186
Query: 103 TLIDAYGRAKMFAEMELTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R + + L M S C+PDV+T + ++A ++ + D ++ Y+
Sbjct: 187 ALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMAD 246
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS----WTIVTYNIVIDAFGRAG 217
I P+ T NI+L YG+AG + M V+ M S WT+ NI++ FG G
Sbjct: 247 RSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTM---NIILSLFGNRG 303
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ ME + R I+P TL L+ AYG +K+ +V+ ++ T FN
Sbjct: 304 QIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFN 363
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++A+ M+ M+ G KPD T+ ++ + G+ + L E++
Sbjct: 364 NVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERL 423
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M D NT + +LS YGR+G D +L M ++ +PDV T +I++
Sbjct: 240 MYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLF 299
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ ++ GI P T T N LI AYG+ +M+ +M + M
Sbjct: 300 GNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTT 359
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + AF ++G ME + + ++ G++P TF L++ +G AG F K+ +++
Sbjct: 360 ATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKL 419
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ +N V+ +A DL +ME +F M+ + P T LV AY G
Sbjct: 420 AERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEGM 479
Query: 254 PEKL 257
+K+
Sbjct: 480 TDKI 483
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 209/346 (60%), Gaps = 1/346 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +A +LF M++EG + + +TALL+AY RS L D AFS+L+ MK+ P CQ
Sbjct: 133 LLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQ 192
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A FD V +L +M + I PNTVT N ++ YGR F +ME
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN G+ID ME YEKF++ GI+P TFNIL+ SYG
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN +I+AF GD K ME F MRSE +K
Sbjct: 313 KKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTK 372
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S ++ +I +T F+N ++ A + EM+ V M
Sbjct: 373 TFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRM 432
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
++R C D T+ MV AY GM + + +K+ + +A K
Sbjct: 433 KERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRTVATK 478
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 2/281 (0%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A + + ++ QP TY L+ K+ ++ Q L +M +G+ P Y L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 105 IDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
+ AY R+ + + L KM S C+PDV+T + L+A ++ Q D ++ Y++
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
I P+ T NI+L YG+ G F++M V+ + + + T NI++ FG G + M
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E + R+ I+P T L+ +YG +K+ SV+ ++ + T +N +++A
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + M+ + M+ G K D T+ ++ Y+ G+
Sbjct: 346 FADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
>gi|108707772|gb|ABF95567.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
Length = 443
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 202/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +A LF M+ +GC + +TAL++AY R+GL D AF LL MK +P CQ
Sbjct: 98 LLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQ 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD V A+ DM+ + I PNTVT N ++ YGRA +ME
Sbjct: 158 PDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKV 217
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI++MEK YEKF+ GI+P T NIL+ +YG
Sbjct: 218 LSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYG 277
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVMEYM+K + WT T+N VI+AF AGD K ME+ F MR+E +KP
Sbjct: 278 KKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTK 337
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ +G+AG K+ +++ + + +DT F N ++ + + EM+ V M
Sbjct: 338 TFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRM 397
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+Q C PD TY +V AY GM +
Sbjct: 398 KQIQCIPDATTYSILVGAYRKEGMTD 423
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 8/298 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
++ + + +K P P T+ L+ ++ + + L +M QG +P Y L
Sbjct: 71 RSSQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTAL 130
Query: 105 IDAYGRAKMFAEMELTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
I AY R + + L M S C+PDV+T + ++A ++ + D ++ Y+
Sbjct: 131 IAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRS 190
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS----WTIVTYNIVIDAFGRAGDL 219
I P+ T NI+L YG+AG + M V+ M S WT+ NI++ FG G +
Sbjct: 191 IAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTM---NIILSLFGNRGQI 247
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ ME + R I+P TL L+ AYG +K+ +V+ ++ T FN +
Sbjct: 248 ESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNV 307
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++A+ M+ M+ G KPD T+ ++ + G+ + L E++
Sbjct: 308 IEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERL 365
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M D NT + +LS YGR+G D +L M ++ +PDV T +I++
Sbjct: 182 MYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLF 241
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ ++ GI P T T N LI AYG+ +M+ +M + M
Sbjct: 242 GNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTT 301
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + AF ++G ME + + ++ G++P TF L++ +G AG F K+ +++
Sbjct: 302 ATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKL 361
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ +N V+ +A DL +ME +F M+ + P T LV AY G
Sbjct: 362 AERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEGM 421
Query: 254 PEKL 257
+K+
Sbjct: 422 TDKI 425
>gi|357157771|ref|XP_003577908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 201/345 (58%), Gaps = 1/345 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP AH LF M +GC + +TAL++AY RSGL D A LL MK P CQ
Sbjct: 167 LLGRSGQPALAHRLFADMQQQGCQPTPELYTALIAAYCRSGLLDDALRLLGDMKAAPLCQ 226
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LIK+ + A FD V A+ +M+ +G+ PNTVT N ++ YGRA +ME
Sbjct: 227 PDVYTYSTLIKALVDASRFDLVDAMYKEMAERGVAPNTVTQNIVLSGYGRAGRMDDMEKL 286
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGNSGQ+D MEK YEKF+ GI+P T NIL+ +YG
Sbjct: 287 LSAMLDSTASKPDVWTMNIILSLFGNSGQVDLMEKWYEKFRGYGIEPETRTLNILIGAYG 346
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVME+M+K + WT TYN VI+AF AGD K ME F MRSE +KP
Sbjct: 347 KKRMYDKMSAVMEFMRKLAFPWTTSTYNNVIEAFAEAGDEKNMEQTFNQMRSEGMKPDTK 406
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + AG K+ +++ + D+ +T F N ++ A R EM+ V M
Sbjct: 407 TFCCLINGFSKAGLFHKVVGMVKLAERLDVPANTSFHNSVLAACARAGDLVEMERVFRHM 466
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
+ C PD TY +V AY GM + + Q + T L M
Sbjct: 467 KHVQCAPDATTYSILVEAYRKEGMTDKVYDLQQENPSLVSTELVM 511
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 43/283 (15%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED--------------------------- 128
P TY L+ GR+ A M +
Sbjct: 156 PKEGTYMKLLLLLGRSGQPALAHRLFADMQQQGCQPTPELYTALIAAYCRSGLLDDALRL 215
Query: 129 ---------CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
C+PDV+T + ++A ++ + D ++ Y++ G+ P+ T NI+L YG
Sbjct: 216 LGDMKAAPLCQPDVYTYSTLIKALVDASRFDLVDAMYKEMAERGVAPNTVTQNIVLSGYG 275
Query: 180 KAGHFEKMSAVMEYMQKYHYS----WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+AG + M ++ M S WT+ NI++ FG +G + ME + R I+
Sbjct: 276 RAGRMDDMEKLLSAMLDSTASKPDVWTM---NIILSLFGNSGQVDLMEKWYEKFRGYGIE 332
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P TL L+ AYG +K+ +V+ F+ T +N +++A+ M+
Sbjct: 333 PETRTLNILIGAYGKKRMYDKMSAVMEFMRKLAFPWTTSTYNNVIEAFAEAGDEKNMEQT 392
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M+ G KPD T+ ++ +S G+ + L E++D
Sbjct: 393 FNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERLD 435
>gi|224099036|ref|XP_002311357.1| predicted protein [Populus trichocarpa]
gi|222851177|gb|EEE88724.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 207/338 (61%), Gaps = 1/338 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+C QP++AH++F M++EG + ++ +TALL+AY R+ L ++ FS++ MK P CQ
Sbjct: 24 LLGRCGQPQRAHQIFDEMIEEGIEPTSEFYTALLAAYCRNNLIEEGFSIINQMKTVPRCQ 83
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ + L +M + I PNTVT N ++ +G+ M+ +ME
Sbjct: 84 PDVYTYSTLLKACVDASRFELIDILYQEMDERLISPNTVTQNIVLSGFGKVGMYDQMERV 143
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S+ C+PDVWTMN L FGN G +D ME+ YEKF++ GI+P TFNIL+ +YG
Sbjct: 144 LSGMLESKTCKPDVWTMNIILSVFGNKGHVDLMERWYEKFRNFGIEPETRTFNILIGAYG 203
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++ MS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E +K
Sbjct: 204 KKRMYDNMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFDQMRAEDMKADTK 263
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S ++ +I +T + ++ A + EM+ V + M
Sbjct: 264 TFCCLINGYANAGLFHKVISSVQLAAKFEIPENTSLYKAVISACAKADDLVEMERVFKQM 323
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + C PD TY MV AY GM + + +KM
Sbjct: 324 KDKQCLPDSRTYSIMVEAYRKEGMNDKIYYLEQEKQKM 361
>gi|226500056|ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays]
gi|195613946|gb|ACG28803.1| PPR2 [Zea mays]
Length = 562
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 200/326 (61%), Gaps = 1/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +AH+LF M+ +GC + +TAL+ AY RS L D+A LL MK++P CQ
Sbjct: 217 LLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSCLLDEALQLLNDMKSSPLCQ 276
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +IK+C+ A FD + DM+ + I PNTVT N ++ YG+A +ME
Sbjct: 277 PDVYTYSTIIKACVDAARFDLTDTMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERV 336
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S C+PDVWTMN L FGN G+++ ME+ YEKF+ G++P T NIL+ +YG
Sbjct: 337 LSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYG 396
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVME+M+K + WT TYN VI+AF AGD ME+ F MRSE ++P
Sbjct: 397 KRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTK 456
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + AG+ K+ +++ + D+ ++T F N ++ A R EM+ V M
Sbjct: 457 TFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRM 516
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ C+PD TY +V AY GM +
Sbjct: 517 KHTQCEPDASTYSILVEAYRKEGMTD 542
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 2/298 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A + E +K P P TY LI ++ + L +M QG +P Y
Sbjct: 188 WQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYT 247
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
LI AY R+ + E L M S C+PDV+T + ++A ++ + D + Y+
Sbjct: 248 ALIGAYCRSCLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDTMYKDMAE 307
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
I P+ T NI+L YGKAG + M V+ + + + T NI++ FG G+++
Sbjct: 308 RSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVE 367
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
ME + R ++P TL L+ AYG +K+ +V+ + T +N ++
Sbjct: 368 LMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVI 427
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+A+ M+ M+ G +PD T+ ++ +S G + L E++D
Sbjct: 428 EAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLD 485
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYS 67
E+ +E F+ G + T++ L+ AYG+ ++DK +++EHM+ P TY+
Sbjct: 370 ERWYEKFRGY---GVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKL--AFPWTTATYN 424
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------------- 114
+I++ +A ++ + M ++G+RP+T T+ LID + RA F
Sbjct: 425 NVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERL 484
Query: 115 ----------------------AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
EME +M CEPD T + + A+ G D +
Sbjct: 485 DVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKI 544
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 200/338 (59%), Gaps = 30/338 (8%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AHELF MV+EGC+ T+ +TALL++Y RS L D+AFS+L MK P CQ
Sbjct: 153 LLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQ 212
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS L+K+C+ A F+ V++L +M + I PNTVT N ++ YG+A F EME
Sbjct: 213 PDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKV 272
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S +PDVWTMN L FGN GQI+ MEK YEKF++ GI+P TFNIL+ +YG
Sbjct: 273 LSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYG 332
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E +K
Sbjct: 333 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTK 392
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+R Y +AG + + + EM+ V M
Sbjct: 393 TFCCLIRGYANAG-----------------------------LFHKAEDLIEMERVFNRM 423
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + C+PD TY MV AY GM + + + ++M
Sbjct: 424 KDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRM 461
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 11/296 (3%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A + E ++ P QP TY L+ K+ + L M +G P T Y L
Sbjct: 126 QALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTAL 185
Query: 105 IDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
+ +Y R+ + E L +M + C+PDV+T + L+A ++ + + +E YE+
Sbjct: 186 LASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRS 245
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS----WTIVTYNIVIDAFGRAGDL 219
I P+ T NI+L YGKAG F++M V+ M + S WT+ N ++ FG G +
Sbjct: 246 ITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM---NTILSLFGNKGQI 302
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ ME + R+ I+P T L+ AYG +K+ SV+ ++ T +N +
Sbjct: 303 EIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 362
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
++A+ + M+ + M+ G K D T+ ++R Y+ G+ + A +DL+E
Sbjct: 363 IEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKA---EDLIE 415
>gi|449441652|ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 200/328 (60%), Gaps = 1/328 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP +A LF MV E C+ + +TALL+AY R+ L D AFS L MK P CQ
Sbjct: 151 LLGRSGQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQ 210
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIK+C+ F+ V++L +M+ + I PNTVT N ++ YG+ + +ME
Sbjct: 211 PDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKV 270
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L+ ML S C PDVWTMN L FGN G I+ ME+ YEKF++ GI+P TFNIL+ +YG
Sbjct: 271 LIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYG 330
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMS+VMEYM+K + WT TYN VI+AF GD K MEY F MR+E ++
Sbjct: 331 KKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTK 390
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ ++ +I +T F+N ++ A + + EM V + M
Sbjct: 391 TFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRM 450
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + C+PD TY M+ AY GM +
Sbjct: 451 KDKHCQPDNKTYSIMMEAYGKEGMNDRV 478
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L++ M + NT + +LS YG+ G +D+ +L M + C+PDV T +I
Sbjct: 230 EIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI 289
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + ++ GI P T T+N LI AYG+ +M+ +M + M
Sbjct: 290 ILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 349
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK-- 186
T N + AF + G ME +E+ ++ G++ TF L++ Y AG F K
Sbjct: 350 FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI 409
Query: 187 ---------------------------------MSAVMEYMQKYHYSWTIVTYNIVIDAF 213
M V + M+ H TY+I+++A+
Sbjct: 410 GSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAY 469
Query: 214 GRAGDLKQMEYL 225
G+ G ++ YL
Sbjct: 470 GKEGMNDRVHYL 481
>gi|326495232|dbj|BAJ85712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 205/345 (59%), Gaps = 1/345 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP A +LF M +GC + +TAL+ AY R+GL D+A LL+ MK P CQ
Sbjct: 182 LLGRSGQPSLAQDLFTEMQQQGCQPTPELYTALIGAYCRNGLLDEALKLLQDMKANPLCQ 241
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSILIK+ + A FD V A+ +M+ + + PNTVT N ++ Y RA +ME
Sbjct: 242 PDVYTYSILIKAFVDAPRFDLVDAMYKEMAERSVAPNTVTQNIVLSGYCRAGRLDDMEKL 301
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML S + +PDVWTMN L FGNSGQ++ MEK YEKF+ GI+P TFNIL+ +YG
Sbjct: 302 LSAMLESANSKPDVWTMNIILSLFGNSGQVELMEKWYEKFRGYGIEPETRTFNILIGAYG 361
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++KMSAVMEYM++ + WT TYN VI+AF AGD K ME F MRSE +KP
Sbjct: 362 KKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTK 421
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ + +A K+ +++ + D+ +T F N ++ A + + EM+ V M
Sbjct: 422 TFCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHM 481
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
+ C+PD +TY ++ AY GM + Q + T L M
Sbjct: 482 KHMQCEPDAITYSILLEAYRKEGMTDKMYALQQENPSLVSTELVM 526
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F A + +SG +A + +++++ D + D ++ + L D++ A
Sbjct: 100 FPAAGESQSQSGRRGRARTPIKNVQKRLDARADAKAWACTVTEALA----DRIAAKNWQG 155
Query: 90 STQGIR---------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ Q P TY L+ GR+ + + +M + C+P +
Sbjct: 156 ALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPSLAQDLFTEMQQQGCQPTPELYTALI 215
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
A+ +G +D K + ++ + QP + T++IL+ ++ A F+ + A+ + M +
Sbjct: 216 GAYCRNGLLDEALKLLQDMKANPLCQPDVYTYSILIKAFVDAPRFDLVDAMYKEMAERSV 275
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLM-RSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ VT NIV+ + RAG L ME L M S KP T+ ++ +G++G+ E +
Sbjct: 276 APNTVTQNIVLSGYCRAGRLDDMEKLLSAMLESANSKPDVWTMNIILSLFGNSGQVELME 335
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I +T FN L+ AYG+ + + +M V+E M++ TY ++ A+
Sbjct: 336 KWYEKFRGYGIEPETRTFNILIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAF 395
Query: 319 STNGMKNHAKEFQDLVEKM 337
+ G AK +D +M
Sbjct: 396 AEAG---DAKNMEDTFNQM 411
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 197/330 (59%), Gaps = 3/330 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCK+P++A LFQ M+ +GC + ++FTAL+SAY RS L A +L+ M TP C
Sbjct: 66 MLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPHCS 125
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS+LIKSC + LL+DM+ +GI+PN VTYN ++DAY ++ ++
Sbjct: 126 PDVFTYSLLIKSCCDCGQLSRASDLLADMTARGIQPNRVTYNIILDAYAKSGSLDKLHDL 185
Query: 121 LVKML---SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++ML S C PD W+ N ++ FGN G I ME+ +++ + P T + L+ +
Sbjct: 186 ALQMLQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAA 245
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y KA F+KM AV+ Y+ +YHY VTYNI+I+A+GRAG QM F M+ ++P
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT C+L+ YG G KL +L + + DT +N ++DAY R + +
Sbjct: 306 SVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFA 365
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
MQ++GCKPD +TY +++AY + G+ + A
Sbjct: 366 AMQEQGCKPDHLTYNILIQAYRSQGLTDKA 395
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 196/330 (59%), Gaps = 3/330 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKCK+P++A LFQ M+ +GC + ++FTAL+SAY RS L A +L+ M TP C
Sbjct: 66 MLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPHCS 125
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEM 117
PDV TYS+LIKSC + LL+DM+ +GI+PN VTYN ++DAY G ++
Sbjct: 126 PDVFTYSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCGSLDKLHDL 185
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +++ S C PD W+ N ++ FGN G I ME+ +++ + P T + L+ +
Sbjct: 186 ALQMLQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAA 245
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y KA F+KM AV+ Y+ +YHY VTYNI+I+A+GRAG QM F M+ ++P
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT C+L+ YG G KL +L + + DT +N ++DAY R + +
Sbjct: 306 SVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFA 365
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
MQ++GCKPD +TY +++AY + G+ + A
Sbjct: 366 AMQEQGCKPDHLTYNILIQAYRSQGLTDKA 395
>gi|356532886|ref|XP_003535000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 485
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 199/326 (61%), Gaps = 2/326 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK QP +AHELF ++ ++GC +T+ +TAL++A+ ++ L D+A S+L+ M N P CQ
Sbjct: 137 LLGKSSQPLRAHELFNSIHEDGC-GSTELYTALIAAFCQNNLVDEALSILDEMMNLPSCQ 195
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TYS LIK+ + + F+ V+ L M+ + I PNT T N ++ YG+A F +ME
Sbjct: 196 PDIFTYSTLIKALVDSLKFEMVELLFDKMAKRSIVPNTYTQNLILSGYGKAGRFDQMEKI 255
Query: 121 LVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M+ C+PDVWTMN + FG+ GQID MEK Y+KF S GIQP +TFNIL+ +YG
Sbjct: 256 VSSMMEGTTCKPDVWTMNTVISVFGDKGQIDIMEKWYDKFCSFGIQPQRSTFNILIAAYG 315
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++KMS+VM+ M++ WT TYN VI+AF GD + ME F M +E +K
Sbjct: 316 SKRMYDKMSSVMQCMRRVKCPWTTSTYNNVIEAFAAVGDAENMERAFDQMYAEGLKADTK 375
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L+ Y +AG K+ S + + I ++T F+N ++ A + EM+ + M
Sbjct: 376 TFCFLINGYANAGIFHKVISSVSLAEKLQIRVNTSFYNAIISACAKDDALTEMERFFKHM 435
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
+++ C PD TY M+ AY GM +
Sbjct: 436 KEKECHPDNTTYSVMIEAYRKEGMND 461
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 9/318 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A S +LS + A L + ++ P QP +TY LI K+ +
Sbjct: 90 AWVHSLPEVLSYRIHKRHWSIALELFDMLREQPYYQPREDTYMKLIVLLGKSSQPLRAHE 149
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAF 143
L + + G +T Y LI A+ + + E L +M++ C+PD++T + ++A
Sbjct: 150 LFNSIHEDGCG-STELYTALIAAFCQNNLVDEALSILDEMMNLPSCQPDIFTYSTLIKAL 208
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM----SAVMEYMQKYHY 199
+S + + +E ++K I P+ T N++L YGKAG F++M S++ME
Sbjct: 209 VDSLKFEMVELLFDKMAKRSIVPNTYTQNLILSGYGKAGRFDQMEKIVSSMMEGTTCKPD 268
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
WT+ N VI FG G + ME + S I+P T L+ AYG +K+ S
Sbjct: 269 VWTM---NTVISVFGDKGQIDIMEKWYDKFCSFGIQPQRSTFNILIAAYGSKRMYDKMSS 325
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
V++ + T +N +++A+ + M+ + M G K D T+ ++ Y+
Sbjct: 326 VMQCMRRVKCPWTTSTYNNVIEAFAAVGDAENMERAFDQMYAEGLKADTKTFCFLINGYA 385
Query: 320 TNGMKNHAKEFQDLVEKM 337
G+ + L EK+
Sbjct: 386 NAGIFHKVISSVSLAEKL 403
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 102/279 (36%), Gaps = 70/279 (25%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV---------- 63
LF M NT + +LS YG++G FD+ ++ M C+PDV
Sbjct: 220 LFDKMAKRSIVPNTYTQNLILSGYGKAGRFDQMEKIVSSMMEGTTCKPDVWTMNTVISVF 279
Query: 64 -------------------------NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
+T++ILI + +DK+ +++ M T
Sbjct: 280 GDKGQIDIMEKWYDKFCSFGIQPQRSTFNILIAAYGSKRMYDKMSSVMQCMRRVKCPWTT 339
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
TYN +I+ AF G + ME+ +++
Sbjct: 340 STYNNVIE-----------------------------------AFAAVGDAENMERAFDQ 364
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ G++ TF L++ Y AG F K+ + + +K YN +I A +
Sbjct: 365 MYAEGLKADTKTFCFLINGYANAGIFHKVISSVSLAEKLQIRVNTSFYNAIISACAKDDA 424
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
L +ME F+ M+ + P T ++ AY G +K+
Sbjct: 425 LTEMERFFKHMKEKECHPDNTTYSVMIEAYRKEGMNDKI 463
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 197/335 (58%), Gaps = 7/335 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K KQ +A +F ++++ T FTALL+ + +S F KA + E M+ C
Sbjct: 43 MLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIFESMRLYEGCV 102
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ +IK C +A + + + + +M +G++P+ VTYN LI YG+A +F E+E
Sbjct: 103 PDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVERV 162
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + + PD T N +R FG + +I ME+ YE G+QP + T N L+ +YG
Sbjct: 163 LSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVTLNSLISAYGT 222
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG FEKM +V +YMQ+Y+Y T +TYNI+++A+GRAG + QME ++ M++E +KP+ T
Sbjct: 223 AGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSST 282
Query: 241 LCSLVRAYGHAG---KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
CS++ AYG G EK+ R+ D + DT +N +DA+ R + F +M+ + E
Sbjct: 283 FCSMLSAYGRHGYWHNVEKVMRQARYFDAA----DTAVYNAAIDAFQRAQNFEDMEKIFE 338
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
M+ +G PD VTY ++ AY + A++ Q+
Sbjct: 339 EMKLKGHAPDDVTYSILIGAYERIRRVDKARDLQE 373
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 135/262 (51%), Gaps = 1/262 (0%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELT 120
D++TY L+ KA + + + +RP T + L+ + ++ F + +E+
Sbjct: 33 DLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIF 92
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L E C PD +T ++ +G K +++ G++PSI T+NIL+ YGK
Sbjct: 93 ESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGK 152
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG F ++ V+ M+ + + VT+N +I FG + +ME + + + ++P VT
Sbjct: 153 AGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVT 212
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L SL+ AYG AG EK+ SV +++ + + + +N +++AYGR +M+ + M+
Sbjct: 213 LNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMK 272
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
KP+ T+ +M+ AY +G
Sbjct: 273 AEFVKPNSSTFCSMLSAYGRHG 294
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 40/194 (20%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPD 62
CK PE + ++ ++ +G + + +L+SAYG +GLF+K S+ ++M+ N P +
Sbjct: 189 CKIPE-MEQAYEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRI- 246
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN------------------------- 97
TY+I++++ +A D+++ M + ++PN
Sbjct: 247 --TYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMR 304
Query: 98 ---------TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
T YN IDA+ RA+ F +ME +M + PD T + + A+ +
Sbjct: 305 QARYFDAADTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRR 364
Query: 149 IDTMEKCYEKFQSA 162
+D E++ +
Sbjct: 365 VDKARDLQEEWNGS 378
>gi|168016406|ref|XP_001760740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688100|gb|EDQ74479.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 191/332 (57%), Gaps = 1/332 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML + KQP+ A LF ++ + + FTAL++ + +S L KAF + E M+ C
Sbjct: 129 MLARVKQPQAASNLFDFLLQDKLRPTLEIFTALITVFTKSNLLKKAFEVFEQMRLFDGCL 188
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+ +IK C A +D+ + L ++M +G+ P VTYNTLI YG+A +FAE+E
Sbjct: 189 PDKYAYTTMIKGCCDAGLYDQAKKLFNEMMREGVEPTIVTYNTLIFGYGKAGLFAEIEYL 248
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + PD T N +R FG +I ME+ YE + G+ T N L+ +YG+
Sbjct: 249 LSLMEANGITPDTITWNTLIRVFGLHNRIPEMEQAYEGLLAQGLMADEVTLNSLIGTYGR 308
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + KM V ++M++Y Y T VTYNI+I+ +G+A ++QM+ F+ M+++ +KP+C+T
Sbjct: 309 AGLYGKMECVTDFMRRYSYPMTTVTYNIIIEIYGKARKIEQMDTAFKRMKAQGLKPNCIT 368
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ AYG G+ K+ ++R + + + DT +N +DA+ R F M+ + E M+
Sbjct: 369 FSSILSAYGKHGEWHKIEKIMRQVRHYNAA-DTAVYNAAIDAHRRALDFEAMEKLFEEMK 427
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G PD +TY T++ AY A+E Q+
Sbjct: 428 MEGVAPDGITYTTLIEAYGRVRKLQKARELQE 459
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 36/188 (19%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
PE + ++ ++ +G A+ + +L+ YGR+GL+ K + + M+ V TY+
Sbjct: 278 PE-MEQAYEGLLAQGLMADEVTLNSLIGTYGRAGLYGKMECVTDFMRRYSYPMTTV-TYN 335
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT--------------------------- 100
I+I+ KA +++ M QG++PN +T
Sbjct: 336 IIIEIYGKARKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHGEWHKIEKIMRQVRHY 395
Query: 101 -------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
YN IDA+ RA F ME +M E PD T + A+G ++
Sbjct: 396 NAADTAVYNAAIDAHRRALDFEAMEKLFEEMKMEGVAPDGITYTTLIEAYGRVRKLQKAR 455
Query: 154 KCYEKFQS 161
+ E++ +
Sbjct: 456 ELQEEWDA 463
>gi|388521199|gb|AFK48661.1| unknown [Lotus japonicus]
Length = 266
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 147/238 (61%), Gaps = 1/238 (0%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSG 147
M+ + I PNTVT N ++ YG+A F +ME L ML S C+PDVWTMN T+ FGN G
Sbjct: 1 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTTISVFGNMG 60
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
QID MEK YEKF++ GI+P TFNIL+ +YGK ++KMS VMEYM+K + WT TYN
Sbjct: 61 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 120
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
VI+AF GD K MEY F MR+E +K T C L+ + +AG K+ S ++ +
Sbjct: 121 NVIEAFTDVGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 180
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+I ++T F+N ++ A + + EM+ V + M+ C PD TY M+ AY GM +
Sbjct: 181 EIAVNTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 238
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
NT + +LS YG++G FD+ +L M + C+PDV T + I D ++
Sbjct: 9 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTTISVFGNMGQIDMMEKW 68
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
GI P T T+N LI AYG+ +M+ +M + M T N + AF +
Sbjct: 69 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 128
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G TME +++ ++ G++ TF L++ + AG F K+ + ++ +K+ +
Sbjct: 129 VGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAVNTTF 188
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
YN V+ A +A DL +ME +F+ M+ + P T ++ AY G +K+
Sbjct: 189 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 240
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
I P+ T NI+L YGKAG F++M V+ M + + T N I FG G + M
Sbjct: 6 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTTISVFGNMGQIDMM 65
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E + R+ I+P T L+ AYG +K+ +V+ ++ T +N +++A
Sbjct: 66 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 125
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ + M+ + M+ G K D T+ ++ ++ G+ + L EK +
Sbjct: 126 FTDVGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 181
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+ EK +E F+ G + T++F L+ AYG+ ++DK +++E+M+
Sbjct: 59 MGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL-QFPW 114
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+TY+ +I++ ++ M +G++ ++ T+ LI+ + A +F ++ T+
Sbjct: 115 TTSTYNNVIEAFTDVGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 174
Query: 122 VKMLSEDCEPDVWTM--NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L+E E V T N L A + + ME+ +++ + P T+ I++++Y
Sbjct: 175 --QLAEKFEIAVNTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 232
Query: 180 KAGHFEKM 187
K G +K+
Sbjct: 233 KEGMNDKI 240
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 184/329 (55%), Gaps = 14/329 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDC 59
LG+ + A LFQ M+ E C A+ ++TAL++AYG++ +F++A ++ HMK N P+C
Sbjct: 56 LGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNC 115
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMS------TQGIRPNTVTYNTLIDAYGRAKM 113
QP+ T + LI + +K +D+ + DM G PN +TYN LIDA + +
Sbjct: 116 QPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGL 175
Query: 114 FAEMELTLVKML-----SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
++ + +++ + + +P+ T N + A G G + E+ + G+QP
Sbjct: 176 L-DIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDH 234
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ L+D+YGKAG +E + M+ + S ++ Y +IDA+GR G ++ E +F++
Sbjct: 235 ITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKM 294
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M+ ++P+ VT SL+ AYG AG PE+ +V + S + + ++ L+DAYG+
Sbjct: 295 MQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGN 354
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ E +L++M++ GC+P+ +TY ++ +
Sbjct: 355 YLEAARMLDMMRRAGCQPNLITYSAILSS 383
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 56/311 (18%)
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L+ F++ K Q+ PN+ Y LI GR L +ML E C+ D
Sbjct: 30 LEVFSWSKKQSWYC--------PNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQ 81
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSA------------------------------- 162
+T + A+G + + + + +
Sbjct: 82 YTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQV 141
Query: 163 -------------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI----VT 205
G +P++ T+N+L+D+ K G + V++YM+ + ++ T
Sbjct: 142 FFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSAT 201
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I+A G+ G ++ E L LM ++P +T +L+ AYG AG E + + +
Sbjct: 202 YNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMK 261
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+++ +D + + ++DAYGR + + + + ++MQ G +P++VTY +++ AY G+
Sbjct: 262 GTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPE 321
Query: 326 HAKEFQDLVEK 336
++ +++ +
Sbjct: 322 ESRNVFNIMRE 332
>gi|168000535|ref|XP_001752971.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695670|gb|EDQ82012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 168/338 (49%), Gaps = 6/338 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QP+ A +LF M G SF AL+ +YGR+ KA L E MK T DCQP
Sbjct: 27 GRISQPQLAADLFDEMEKRGIKKTAVSFNALIHSYGRNNEAHKALQLFEDMKATNDCQPT 86
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ LI + A ++++ L D G P+ TYN LI Y RA ++ME T
Sbjct: 87 LVTYNTLISMYSRMGATEEMKKLFLDCKEAGFSPDRHTYNALIWGYMRAGQLSQMEETFN 146
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + +C+ DV T N + + + ++ ME + Q+AGI + IL++ Y +
Sbjct: 147 ELQAGECKADVITYNAQIIGYARANAVNKMEAVFSSMQAAGIPINAMVGEILIEVYSRTK 206
Query: 183 HFEKMS---AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSC 238
HFEKM +M+ Y + +++VI+++ A L +ME + R+ +++R+ S
Sbjct: 207 HFEKMENALKIMDVTPGVQYGSRV--HSMVIESYADANKLDEMEAAISRMFQNKRMFSSP 264
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+L +L+ AY AG+ +L + + + +L + +N L+ YG+ M+ V
Sbjct: 265 KSLHALIMAYSRAGEYGRLAKTMEVVKGAGWILQSSIYNILISEYGKGGHLDRMEQVFRE 324
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
M C P T++ M+ AY N + DL+ K
Sbjct: 325 MMDASCPPSFETFQYMIDAYEANNNEAEVDRILDLMRK 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M + E+ +LF + G + ++ AL+ Y R+G + ++ +C+
Sbjct: 96 MYSRMGATEEMKKLFLDCKEAGFSPDRHTYNALIWGYMRAGQLSQMEETFNELQ-AGECK 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ I +A A +K++A+ S M GI N + LI+ Y R K F +ME
Sbjct: 155 ADVITYNAQIIGYARANAVNKMEAVFSSMQAAGIPINAMVGEILIEVYSRTKHFEKMENA 214
Query: 121 LVKMLSEDCEPDVW----------------------------------------TMNCTL 140
L M D P V +++ +
Sbjct: 215 LKIM---DVTPGVQYGSRVHSMVIESYADANKLDEMEAAISRMFQNKRMFSSPKSLHALI 271
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
A+ +G+ + K E + AG + +NIL+ YGK GH ++M V M
Sbjct: 272 MAYSRAGEYGRLAKTMEVVKGAGWILQSSIYNILISEYGKGGHLDRMEQVFREMMDASCP 331
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ T+ +IDA+ + +++ + LMR +P + + R +
Sbjct: 332 PSFETFQYMIDAYEANNNEAEVDRILDLMRKAGCEPKSNVMPTSDRMW 379
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 1/333 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ KQ +A F M C SF L++AY R G ++A +L MK + +C P
Sbjct: 112 GRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKES-NCSPG 170
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ ++ K+ ++ + + +M +G+ P T+ +I+ YG+A A+ E
Sbjct: 171 LVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQ 230
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C P ++T + A G E+ + + QS G P I T+N LL++Y + G
Sbjct: 231 SMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGG 290
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
H V E M + V+YNI+IDAFGRAG + + ++ M+ KP+ +
Sbjct: 291 HPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHI 350
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ A+ AG+ + +R +++ + DT FN L+ AYG +M+ + E MQ
Sbjct: 351 LLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGS 410
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
CKPD +T T++ Y+ G A+E + +E
Sbjct: 411 VCKPDIITLNTLINVYAQGGYIERAEEIFNSLE 443
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 157/335 (46%), Gaps = 4/335 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + A ++F+ M + G +FT +++ YG++ KA L + M+ C
Sbjct: 180 VLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKAL-CP 238
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY+ LI + + + + + +++ + G P+ TYN L++AY R A +
Sbjct: 239 PSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEV 298
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML + D + N + AFG +G I + Y+ + G +P++ + +LL ++ K
Sbjct: 299 FETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVK 358
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + ++ +N ++ A+G +G + +ME L+ M+ KP +T
Sbjct: 359 AGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIIT 418
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L +L+ Y G E+ + +++ D + + L+ AY + K + + V + M
Sbjct: 419 LNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKML 478
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
GC PD+ T + ++ S+ KE D++E
Sbjct: 479 IAGCIPDRATAKVLL---SSCRGPEQVKEVTDMIE 510
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 2/332 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K P+ + A+ C + + ++ + R + A + E + +PDV
Sbjct: 46 KSPQDVWDALDALPR--CVGSWEDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGC 103
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+++L+ + + + + + M P ++N L+ AY R E L +M
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C P + T N L SG E + + Q+ G+ P++NTF ++++ YGKA H
Sbjct: 164 ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSA 223
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + + M+K ++ TY +I+A R G+ + E +F ++S P T +L+
Sbjct: 224 KAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALL 283
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
AY G P V + + + D V +N L+DA+GR ++ + + + M++ G K
Sbjct: 284 EAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFK 343
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P ++ ++ A+ G A+ F +E M
Sbjct: 344 PTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
>gi|242057231|ref|XP_002457761.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
gi|241929736|gb|EES02881.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
Length = 267
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGKC+QP A LF+AM+ E +TAL+ AYG SG D+A + +E MK DC+
Sbjct: 83 MLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGFLDEALAAVEQMKGAADCK 142
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S + FD + A+L +MS GI N+V +N +ID YG+A MF EME
Sbjct: 143 PDGYTFS--------SRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGA 194
Query: 121 LVKMLSEDCE-PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ML PD++TMN + A+GN G+ D MEK Y +FQ G++P TFNI SYG
Sbjct: 195 LSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNI--KSYG 252
Query: 180 KAGHFEKMSAV 190
KAG ++KM ++
Sbjct: 253 KAGMYDKMMSI 263
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
++ A + E ++ +P TY+ L+ K AL M ++ +RP Y
Sbjct: 54 WESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYT 113
Query: 103 TLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
L+ AYG + E + +M + DC+PD +T + S + D + ++
Sbjct: 114 ALVGAYGYSGFLDEALAAVEQMKGAADCKPDGYTFS--------SRRFDLIPAVLDEMSY 165
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLK 220
GI+ + N ++D YGKA FE+M + M + + I T N VI A+G G
Sbjct: 166 LGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGNHGRTD 225
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+ME + + ++P T +++YG AG +K+ S+ +
Sbjct: 226 EMEKSYSEFQLMGVEPDTKTFN--IKSYGKAGMYDKMMSIFSLV 267
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LDS A +E + E ++K H Y TY ++ G+ LF+ M SER
Sbjct: 45 LDSTVAACRWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSER 104
Query: 234 IKPSCVTLCSLVRAYGHAG------------------KPEKLGSVLRFIDNSDIMLD--- 272
++P+ +LV AYG++G KP+ R D +LD
Sbjct: 105 LRPTADVYTALVGAYGYSGFLDEALAAVEQMKGAADCKPDGYTFSSRRFDLIPAVLDEMS 164
Query: 273 -------TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK-PDKVTYRTMVRAYSTNG-- 322
+V N ++D YG+ F EM+G L M + G PD T +++ AY +G
Sbjct: 165 YLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGNHGRT 224
Query: 323 --MKNHAKEFQ 331
M+ EFQ
Sbjct: 225 DEMEKSYSEFQ 235
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 45/229 (19%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P + TY L+ G+ + MLSE P + A+G SG +D
Sbjct: 72 PRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGFLDEALAA 131
Query: 156 YEKFQSAG-IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
E+ + A +P TF+ + F+ + AV++ M V +N +ID +G
Sbjct: 132 VEQMKGAADCKPDGYTFS--------SRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYG 183
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A ++ME G++ +++ + D
Sbjct: 184 KAAMFEEME----------------------------------GALSAMLESGSNVPDIY 209
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
N ++ AYG EM+ Q G +PD T+ +++Y GM
Sbjct: 210 TMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFN--IKSYGKAGM 256
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 3/317 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E A E+ M +GC N ++ L+ G++G FD+A LL M++ C P
Sbjct: 54 LGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN-GCVP 112
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELT 120
DV TY+ LI + KA + L ++M +G P+T TYN+LI G+ + MEL
Sbjct: 113 DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL- 171
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PDV T + + G G+ K +++ + G +P TF L+D+ GK
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + +++ M++ +VTYN +I FG+ GDL + L M+ KP VT
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ A + ++ VL+ ++ DT+ +N L++ G+ + + + M+
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Query: 301 QRGCKPDKVTYRTMVRA 317
+GC PD VTY T++ A
Sbjct: 352 SKGCNPDVVTYSTLITA 368
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +KA EL + M GC + ++++L++ G+ G KAF L + MK +P
Sbjct: 159 LGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR-KP 217
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++ L+ + KA D LL +M +G++P VTYN LI +G+ E L
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C+PDV T +C + + Q+D + +K + G P T+N L++ GKA
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA 337
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M+ + +VTY+ +I A G+A ++ LF M S I+P T
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
CS++ G AG+ + + + + D + +N +++ GR F E + + E M++
Sbjct: 398 CSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457
Query: 302 RGCKPDKVTYRTMVRAYS-TNGMKNHAKEFQDLVEK 336
G PD TY ++ S T + + ++L+E+
Sbjct: 458 SGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 182/381 (47%), Gaps = 45/381 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A EL M + G ++ AL++ +G+ G +A++LL+ MK C+P
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN-GCKP 287
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS LI +KA D+ +L M +G P+T+TYNTLI+ G+A + +
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S+ C PDV T + + A G + ++++ +E+ +S GIQP + T+ ++ GKA
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKA 407
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT- 240
G + + M+ S ++TYN +++ GR G K+ +F M+ + P T
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 241 ---------------LCSLVR----------------------AYGHAGKPEKLGSVLRF 263
C L++ ++G+ + +L L+F
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL---LQF 524
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ + +N L+DA + +E LE ++++G KPD V+Y +++ A G
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584
Query: 324 KNHAKEFQDLVEKMDETCLAM 344
+ A E L+E+M + L +
Sbjct: 585 IDTAFE---LLEEMSKRGLKL 602
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 14/321 (4%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++ +LL+A ++G ++A L E +K PDV +YS LI S +A ++ +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELK-AAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+++M +G +PN TYNTL+D G+A F E L +M C PDV T NC + G
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G++ + + + G P T+N L+ GK G +K ++E M+++ ++T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +I G+ G+ + LF+ M+ KP +T +L+ A G AG+ + +L +
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ V +N L+ +G++ E +L+ M++ GCKPD VTY ++ T +K
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI----TGLIK- 301
Query: 326 HAKEFQDLVEKMDETCLAMKR 346
++DE C +K+
Sbjct: 302 --------ASQLDEACQVLKK 314
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 157/331 (47%), Gaps = 1/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q E+A LF+ + + S++ L+++ GR+G ++ A ++ M+ C+P
Sbjct: 19 LAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ-AKGCKP 77
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ KA FD+ LL++M G P+ TYN LI G+A +E
Sbjct: 78 NLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLF 137
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C PD +T N + G G+ + E+ + G P + T++ L+ GK
Sbjct: 138 AEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKD 197
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K + + M++ +T+ ++DA G+AG + L M+ +KP VT
Sbjct: 198 GETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTY 257
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ +G G + ++L + + D V ++CL+ + E VL+ M++
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK 317
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
GC PD +TY T++ G+ N A D
Sbjct: 318 EGCPPDTITYNTLINGLGKAGLLNDAGRLFD 348
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 150/321 (46%), Gaps = 1/321 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q ++A ++ + M EGC +T ++ L++ G++GL + A L + MK + C PDV
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK-SKGCNPDV 359
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS LI + KA + L +M + GI+P+ TY ++I G+A + + +
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + PDV T N L + G G+ K +E + +G+ P + T++ LL K
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ +++ + + ++ + ++ ++ G++ + L + S+ + P + +
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ A AG+ + + L + D V ++ L+ A G+ +LE M +RG
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Query: 304 CKPDKVTYRTMVRAYSTNGMK 324
K +Y +VR G +
Sbjct: 600 LKLSPRSYSNLVRKLQDWGAR 620
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P++ T+N LL++ KAG E+ + E ++ ++ +V+Y+ +I++ GRAG + +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
M+++ KP+ T +LV G AG+ ++ +L + ++ + D +NCL+ G+
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+E + M++RGC PD TY +++ G A E + +E+
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q + A LF M +G + ++ A L++ GR G F +A + E MK +
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES-GLL 461
Query: 61 PDVNTYSILI-------------------------------KSCLKAFA----FDKVQAL 85
PDV TY L+ CL+ D+ L
Sbjct: 462 PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL 521
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L +++G+ P +YN LIDA +A +E TL + + +PD+ + + + A G
Sbjct: 522 LQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+GQIDT + E+ G++ S +++ L+
Sbjct: 582 TGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 1/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ Q M GC + ++ +L+SAY R GL + A L M +PD
Sbjct: 317 GKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEK-GIKPD 375
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ KA + +M +G +PN T+N LI +G F EM
Sbjct: 376 VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 435
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + C PD+ T N L FG +G + +++ + AG P +TFN L+ SY + G
Sbjct: 436 DIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCG 495
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ AV + M + + + +YN V+ A R G KQ E + M+ R KP+ +T C
Sbjct: 496 SFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYC 555
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + E++ ++ I + I V LV + E + ++QR
Sbjct: 556 SLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQR 615
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD T MV Y M A E D +++
Sbjct: 616 GFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR 649
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 4/329 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+F+ M + GC ++ +L+ YG+ G+ ++K L++ MK + PD TY+ LI
Sbjct: 222 VFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMK-SAGIAPDSYTYNTLISC 280
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
C + +++ +L +M G P+ VTYN L+D YG+++ E L +M C P
Sbjct: 281 CRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPS 340
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ T N + A+ G ++ + + GI+P + T+ LL + KAG + + E
Sbjct: 341 IVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFE 400
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ I T+N +I G G +M +F +++ + P VT +L+ +G G
Sbjct: 401 EMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNG 460
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ V + + + + + FN L+ +Y R F + V + M + G PD +Y
Sbjct: 461 MDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYN 520
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
++ A + G+ +++ L E D C
Sbjct: 521 AVLAALARGGLWKQSEKV--LAEMKDGRC 547
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 177/419 (42%), Gaps = 77/419 (18%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M +EGC N +F AL+ +G G F + + E +K T C PD+
Sbjct: 388 KAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK-TFQCSPDI 446
Query: 64 -----------------------------------NTYSILIKSCLKAFAFDKVQALLSD 88
+T++ LI S + +FD+ A+
Sbjct: 447 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKR 506
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ P+ +YN ++ A R ++ + E L +M C+P+ T L A+ N +
Sbjct: 507 MLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 566
Query: 149 IDTM-----------------------------------EKCYEKFQSAGIQPSINTFNI 173
I+ M E+ + + + G P I T N
Sbjct: 567 IERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNA 626
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++ YG+ K + +++ M++ ++ ++ TYN ++ + R+ + ++ E + R + ++
Sbjct: 627 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKG 686
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
I+P ++ +++ AY G+ VL + S D + +N + +Y F E
Sbjct: 687 IRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAI 746
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK------MDETCLAMKR 346
V+ M + GCKP++ TY ++V Y ++ A F + + K MDE C +R
Sbjct: 747 DVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHISMDEECRLSER 805
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 7/348 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPD 62
KC + E + + N ++S G+ G A SLL ++ K+ D D
Sbjct: 142 KCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDV--D 199
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ +I + + + + M G +P +TYN +++ YG+ M + LV
Sbjct: 200 VYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLV 259
Query: 123 -KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S PD +T N + + ++ + AG P T+N LLD YGK+
Sbjct: 260 DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKS 319
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ V++ M+ +IVTYN +I A+ R G L+ L M + IKP T
Sbjct: 320 RRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTY 379
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + AGK + + + N + FN L+ +G F EM V E ++
Sbjct: 380 TTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKT 439
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
C PD VT+ T++ + NGM + E + ++M +R F
Sbjct: 440 FQCSPDIVTWNTLLSVFGQNGMDS---EVSGVFKEMKRAGFVPERDTF 484
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 188/385 (48%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +K E+F M +G + S+TAL++AYGR+G ++ + LL+ MKN
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDK-IS 208
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------------ 107
P + TY+ +I +C + ++ + L ++M +GI+P+ VTYNTL+ A
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 108 -----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+G+ + ++ L +M S PD+ + N L A+
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYA 328
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
SG I + + Q+AG P+ NT+++LL+ +G++G ++ + + M+ +
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA 388
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I+ FG G K++ LF M E I+P T ++ A G G E +L+++
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+DI+ + + +++A+G+ + E M + G P TY +++ +++ G+
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGL- 507
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KE + ++ ++ ++ + R F
Sbjct: 508 --VKESEAILSRLVDSGIPRNRDTF 530
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 148/336 (44%), Gaps = 4/336 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK ++ EK +L M G + S+ LL AY +SG +A + M+ C P
Sbjct: 292 FGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ-AAGCTP 350
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ NTYS+L+ ++ +D V+ L +M + P+ TYN LI+ +G F E+
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ E+ EPD+ T + A G G + K + + I PS + +++++G+A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E+ M + + +I TY+ ++ +F R G +K+ E + + I + T
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + AY GK E+ ++ S D ++ Y + E + E M+
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P + Y M+ Y G + +L+E+M
Sbjct: 591 SDILPSIMCYCMMLAVY---GKTERWDDVNELLEEM 623
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 154/341 (45%), Gaps = 11/341 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F+ M D G + +++ L+ +G+ +K LL M + PD+ +Y++
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSL-PDITSYNV 322
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ K+ + + + M G PN TY+ L++ +G++ + ++ ++M S +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T N + FG G + + I+P + T+ ++ + GK G E
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++YM + Y VI+AFG+A ++ F M PS T SL+ ++
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSF 502
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ ++L + +S I + FN ++AY + F E M++ C PD+
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
T ++ YS F LV++ E MK D
Sbjct: 563 RTLEAVLSVYS----------FARLVDECREQFEEMKASDI 593
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 148/338 (43%), Gaps = 38/338 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F + + G + ++ L ++M+ C+P+ + Y+I+I + DK + +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV--------------------------- 122
+QG+ + +Y LI+AYGR + E L L+
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRY-ETSLELLDRMKNDKISPSILTYNTVINACARGGL 226
Query: 123 ----------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+M E +PD+ T N L A G D E + GI P + T++
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L++++GK EK+S ++ M I +YN++++A+ ++G +K+ +F M++
Sbjct: 287 HLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ T L+ +G +G+ + + + + +S+ D +N L++ +G F E+
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M + +PD TY ++ A G+ A++
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF MV+E + + +++ ++ A G+ GL + A +L++M D P Y+ +I++
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAF 467
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A +++ + M G P+ TY++L+ ++ R + E E L +++ +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + A+ G+ + K Y + + P T +L Y A ++ E
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA-YGHAG 252
M+ +I+ Y +++ +G+ + L M S R+ + +++ Y
Sbjct: 588 MKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDS 647
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD----- 307
+ + VL +++ L F+N L+DA L VL +RG P+
Sbjct: 648 NWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKN 707
Query: 308 KVTYRTMVRAYSTNGM 323
K+ + V S GM
Sbjct: 708 KLVWSVDVHRMSEGGM 723
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-SWTIVTYNIV 209
++ +C + F++ + S+N F ++ + G +++ + +YMQ+ + Y I+
Sbjct: 91 SIARCLDIFKN---KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIM 147
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I GR G L + +F M S+ + S + +L+ AYG G+ E +L + N I
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKI 207
Query: 270 MLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ +N +++A R E + G+ M+ G +PD VTY T++ A + G+ + A+
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 165/309 (53%), Gaps = 2/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M N+ F+ +L++Y G + K+F +L+ MKN+ +PD + Y++
Sbjct: 378 ESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNS-GVRPDRHFYNV 436
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K D M ++GI+P+TVT+NTLID + +A++ E +M+ +
Sbjct: 437 MIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKG 496
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P V T N + +FG + D ++ +S G+ P++ T+ L+D YGK+G F
Sbjct: 497 FSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAI 556
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+ + YN +I+A+ + G +Q FRLMR++ +KPS + L SL+ A+
Sbjct: 557 ECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAF 616
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + SVL+++ +D+ D V + L+ A R+ F ++ V E M GC PD+
Sbjct: 617 GEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDR 676
Query: 309 VTYRTMVRA 317
R M+R+
Sbjct: 677 KA-RAMLRS 684
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P KA E + G T + A++SA G SG +A ++ E MK+ +P
Sbjct: 266 FAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDN-GLKP 324
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +KA + ++S+M G+ P+ TY+ LIDAY A + + L
Sbjct: 325 KTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVL 384
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + P+ + + L ++ + G+ + ++ +++G++P + +N+++D++GK
Sbjct: 385 KEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKF 444
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + M VT+N +ID +A ++ E LF M + P T
Sbjct: 445 SCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTF 504
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ ++G + + + +++ + + ++ + V + L+D YG+ F++ LE M+
Sbjct: 505 NIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKS 564
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 565 AGLKPSSTMYNALINAYAQKGLSEQA 590
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 164/338 (48%), Gaps = 8/338 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYS 67
EK +E F ++ + + ++ AL++A R+ +KA +L+ M+ D P D YS
Sbjct: 168 EKLYEAF--LLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQ--DGYPSDFVNYS 223
Query: 68 ILIKSCLKAFAFDK--VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++I+S +++ D +Q L S++ + + N +I + +A + L +
Sbjct: 224 LIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQ 283
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ P T+ + A G+SG+I E +E+ + G++P +N LL Y KAG +
Sbjct: 284 ASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLK 343
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ M++ S TY+++IDA+ AG + + + M + I P+ ++
Sbjct: 344 DAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRIL 403
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+Y G+ +K VL+ + NS + D F+N ++D +G+ C + M G +
Sbjct: 404 ASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQ 463
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETCL 342
PD VT+ T++ + + A+E F++++EK C+
Sbjct: 464 PDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCV 501
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK+ E+F+ M G + S+TAL+++YGR G ++ + LLE MK
Sbjct: 151 LLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKE-KVT 209
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY+ +I SC + ++ + +L ++M +GI+P+ +TYNTL++A + E E+
Sbjct: 210 PSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEM 269
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M PD+ T + FG +++ + + ++ +S+G P I+++N+LL++Y
Sbjct: 270 VFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYA 329
Query: 180 KAGHFEKMSAVMEYMQKYH-------YSWT----------------------------IV 204
G V MQ+ YS +
Sbjct: 330 SKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVG 389
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN++I+ FG G K++ LF M E ++P+ T L+ A G G E +L +
Sbjct: 390 TYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
D I+ T + +++AYG+ + E + M + G KP TY +++ ++ G+
Sbjct: 450 DEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGL- 508
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KE + ++ KM E+ +A R F
Sbjct: 509 --YKESEAIMWKMGESGVARDRDSF 531
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 41/347 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F + + + G + ++ L ++M+ C+P+ + Y+I+I + +K + +M
Sbjct: 109 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEM 168
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV--------------------------- 122
T G+ + +Y LI++YGR + E+ L L+
Sbjct: 169 PTHGVPRSVFSYTALINSYGRHGQY-EVSLELLERMKKEKVTPSILTYNTVINSCARGGL 227
Query: 123 ----------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+M E +PD+ T N L A N G D E + G+ P I T+
Sbjct: 228 NWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYR 287
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L++++GK EK+S +++ M+ I +YN++++A+ GD++ +FR M+
Sbjct: 288 NLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEA 347
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
R P+ VT L+ YG G+ + + + + S+ D +N L++ +G F E+
Sbjct: 348 RCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEV 407
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ M + +P+ TY ++ A G+ AK+ ++ MDE
Sbjct: 408 VTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKK---ILLHMDE 451
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 155/322 (48%), Gaps = 3/322 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F+ M + G + ++ L+ +G+ +K LL+ M+++ + PD+++Y++
Sbjct: 265 DEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNL-PDISSYNV 323
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ + M PN VTY+ L++ YG + ++ ++M +
Sbjct: 324 LLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSN 383
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + FG G + + ++P++ T+ L+ + GK G E
Sbjct: 384 TEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAK 443
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ +M + + Y VI+A+G+A ++ +F M KP+ T SL+ +
Sbjct: 444 KILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMF 503
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPD 307
G ++ +++ + S + D FN +++ Y + F E +K +E+ + R +PD
Sbjct: 504 ARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKAR-FQPD 562
Query: 308 KVTYRTMVRAYSTNGMKNHAKE 329
+ T+ ++ Y T G+ + ++E
Sbjct: 563 ERTFEAVLSVYCTAGLVDESEE 584
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 136/331 (41%), Gaps = 1/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + EK EL + M G + S+ LL AY G A + M+ C P
Sbjct: 293 FGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEA-RCVP 351
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYS+L+ +D V+ L +M P+ TYN LI+ +G F E+
Sbjct: 352 NAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLF 411
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ E+ EP++ T + A G G + +K GI PS + ++++YG+A
Sbjct: 412 HDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQA 471
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E+ + M + T+ TYN +I+ F R G K+ E + M + +
Sbjct: 472 ASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSF 531
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ Y G+ E+ ++ + D F ++ Y E + ++
Sbjct: 532 NGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRA 591
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G P + Y M+ Y+ + + A E D
Sbjct: 592 SGILPSVMCYCMMIAVYARSNRWDDAYEVLD 622
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 1/289 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F+ M + C N +++ LL+ YG G +D L MK + +PDV TY++LI
Sbjct: 337 AMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMK-VSNTEPDVGTYNVLI 395
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + F +V L DM + + PN TY LI A G+ + + + L+ M +
Sbjct: 396 EVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIV 455
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + A+G + + + G +P++ T+N L++ + + G +++ A+
Sbjct: 456 PSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAI 515
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M M + + ++N VI+ + + G ++ + + R +P T +++ Y
Sbjct: 516 MWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCT 575
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
AG ++ R I S I+ + + ++ Y R + + VL+ M
Sbjct: 576 AGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEM 624
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L + G I +C E F++ + S+N F ++ + + G +++ +
Sbjct: 76 DVETLINKLSSLPPRGSI---ARCLEIFKN---KLSLNDFALVFKEFAQRGDWQRSLRLF 129
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + Y I+I GR G L++ +F M + + S + +L+ +YG
Sbjct: 130 KYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGR 189
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR--------LKCFAEMKGVLEVMQQR 302
G+ E +L + + + +N ++++ R L FAEM+
Sbjct: 190 HGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMR-------HE 242
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAK 328
G +PD +TY T++ A + G+ + A+
Sbjct: 243 GIQPDIITYNTLLNACANRGLGDEAE 268
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 10/342 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK KQ +A + F M D C SF LL+AY R +KA L MK + + P
Sbjct: 94 GKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKES-NYSPG 152
Query: 63 ---------VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+ TY+ ++ K+ + + DM QGI P T+ +I+ YG+A
Sbjct: 153 TVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYY 212
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+ + M C P+++T + A G E+ + + QS G P + T+N
Sbjct: 213 SDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNA 272
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LL++Y + H V + M + V+YNI+IDAFGRAG + ++ M+
Sbjct: 273 LLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAG 332
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
KP+ + L+ +Y AGK + ++R I+NS + DT FN L+ AYG EM+
Sbjct: 333 FKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEME 392
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+LE M KPD T T++ AY+ G A+E + +E
Sbjct: 393 SLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLE 434
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 162/336 (48%), Gaps = 4/336 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + +A + F+ M +G +FT +++ YG++ DKA L M+ C
Sbjct: 171 VLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKAL-CP 229
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+ L+ + + + + + +++ + G P+ TYN L++AY R + +
Sbjct: 230 PNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEV 289
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ PD + N + AFG +G + Y+ + AG +P++ + +LL SY K
Sbjct: 290 FQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAK 349
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + ++ ++ +N ++ A+G +G + +ME L M S KP T
Sbjct: 350 AGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDIST 409
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L +L+ AY G EK V +++ + D + + L+ AY + K F + + + M
Sbjct: 410 LNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMV 469
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ GC PD+ T + + S+ KE D++E+
Sbjct: 470 KAGCIPDRATAKVFL---SSCRSPEQVKEVTDMIER 502
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ +N LIDAYG++K + E E T M C P + N L A+ Q++ EK
Sbjct: 80 KPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEK 139
Query: 155 CYEKFQSAGIQPS---------INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + + + P I T+N L+ GK+G + MQK + T
Sbjct: 140 LFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNT 199
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ I+I+ +G+A + + LFR MR P+ T +L+ A+ G + + +
Sbjct: 200 FTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQ 259
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + D +N L++AY R + K V + M + G +PD+V+Y ++ A+ G+
Sbjct: 260 SVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTA 319
Query: 326 HAKEFQD 332
A+ D
Sbjct: 320 DAQAVYD 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 52/235 (22%)
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHF---------------------------------- 184
Q +P + FN+L+D+YGK+ +
Sbjct: 74 LQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQ 133
Query: 185 -EKMSAVMEYMQKYHYS-----WT----IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
EK + M++ +YS W I TYN ++ G++G L Q E FR M+ + I
Sbjct: 134 LEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGI 193
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P+ T ++ YG A +K + R + + + + L++A+ R +
Sbjct: 194 LPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEE 253
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETCLAMKRPD 348
+ +Q G PD TY ++ AYS AKE FQ +VE A RPD
Sbjct: 254 IFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVE-------AGVRPD 301
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 157/333 (47%), Gaps = 1/333 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++P +A E+ + M G + ++ +L+SAY R GL D+A L M +PD
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKK-GIKPD 395
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ K D + +M G +PN T+N LI +G F EM
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ +C PD+ T N L FG +G + +++ + AG P +TFN L+ +Y + G
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ A+ M + + TYN V+ A R G +Q E + M+ R KP+ +T C
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + E++ ++ I + I V LV Y + E + ++++
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
G PD T MV Y M + E + ++
Sbjct: 636 GFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+F+ + +EGC ++ +L+ YG+ G+ + K L++ MK++ PD+ TY+ LI S
Sbjct: 242 VFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS-GVAPDLYTYNTLISS 300
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------MFAEMEL------ 119
C + +++ + +M G P+ VTYN L+D YG+++ + EME
Sbjct: 301 CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPS 360
Query: 120 -----TLV-----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
+L+ +M+ + +PDV+T L F +G+ D K +E
Sbjct: 361 IVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFE 420
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ + AG QP+I TFN L+ +G G+F +M V E ++ IVT+N ++ FG+ G
Sbjct: 421 EMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNG 480
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ +F+ M+ P T +L+ AY G ++ ++ R + ++ + D +N
Sbjct: 481 MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYN 540
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ A R + + + VL M+ CKP+++TY +++ AY+ NG
Sbjct: 541 AVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA-NG 584
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 2/331 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M GC N +F AL+ +G G F + + E +K +C PD+
Sbjct: 408 KTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIK-ICECVPDI 466
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T++ L+ + +V + +M G P T+NTLI AY R F + +
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRR 526
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML PD+ T N L A G + EK + + +P+ T+ LL +Y
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 586
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+MSA+ E + V ++ + ++ L + E F +R + P TL +
Sbjct: 587 VERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V YG K +L FI +S +N L+ Y R + F + + +L + +G
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 304 CKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
KPD +++ T++ AY NG MK ++ F ++
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 162/328 (49%), Gaps = 2/328 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + A L + ++G + ++T+L++AY +G + +A + + ++ C+
Sbjct: 194 VLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE-GCR 252
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K + K+ L+ M + G+ P+ TYNTLI + R ++ E
Sbjct: 253 PTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAE 312
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + PD T N L +G S + + ++ +++G PSI T+N L+ +Y
Sbjct: 313 VFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYA 372
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G ++ + M K + TY ++ F + G +F MR +P+
Sbjct: 373 RDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNIC 432
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ +G+ G ++ V I + + D V +N L+ +G+ +E+ GV + M
Sbjct: 433 TFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 492
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ G P++ T+ T++ AYS G + A
Sbjct: 493 KRAGFVPERDTFNTLISAYSRCGFFDQA 520
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 162/341 (47%), Gaps = 1/341 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ + +F+ M G +F L+SAY R G FD+A ++ M +
Sbjct: 475 VFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA-GVT 533
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD++TY+ ++ + + +++ + +L++M +PN +TY +L+ AY K M
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ S EP + + + S + E+ + + + G P I T N ++ YG+
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
K + ++ +++ ++ ++ TYN ++ + R ++ E + R + ++ +KP ++
Sbjct: 654 RRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ AY G+ ++ + + + + D + +N + +Y F E V++ M
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ GCKP++ TY +++ + ++ A F + +D +
Sbjct: 774 KNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSV 814
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 5/318 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++S G+ G A SLL ++N D+ Y+ LI + + + + + +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRND-GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 93 GIRPNTVTYNTLIDAYGRAKM-FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G RP +TYN +++ YG+ M ++++ + M S PD++T N + + +
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ +E+ ++AG P T+N LLD YGK+ + V++ M+ ++ +IVTYN +I
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A+ R G L + L M + IKP T +L+ + GK + V + +
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ FN L+ +G F EM V E ++ C PD VT+ T++ + NGM + E
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS---EVS 486
Query: 332 DLVEKMDETCLAMKRPDF 349
+ ++M +R F
Sbjct: 487 GVFKEMKRAGFVPERDTF 504
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F + ++G + + A++S YGR + K +L +K++ P + TY+ L+
Sbjct: 629 FLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS-GFTPSLTTYNSLMYMYS 687
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ F+K + +L ++ +G++P+ +++NT+I AY R E +M PDV
Sbjct: 688 RTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVI 747
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N + ++ + + G +P+ NT+N L+D + K ++ S+ + +
Sbjct: 748 TYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNL 807
Query: 195 QKYHYSWT 202
+ S T
Sbjct: 808 RNLDPSVT 815
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+++ GK G ++++ ++ I Y +I A+ G ++ +F+ + E
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 233 RIKPSCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+P+ +T ++ YG G P K+ ++ + +S + D +N L+ + R + E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
V E M+ G PDKVTY ++ Y G +E +++++M+ + A
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVY---GKSRRPREAMEVLKEMEASGFA 358
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 157/333 (47%), Gaps = 1/333 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++P +A E+ + M G + ++ +L+SAY R GL D+A L M +PD
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKK-GIKPD 395
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ K D + +M G +PN T+N LI +G F EM
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ +C PD+ T N L FG +G + +++ + AG P +TFN L+ +Y + G
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ A+ M + + TYN V+ A R G +Q E + M+ R KP+ +T C
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + E++ ++ I + I V LV Y + E + ++++
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
G PD T MV Y M + E + ++
Sbjct: 636 GFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+F+ + +EGC ++ +L+ YG+ G+ + K L++ MK++ PD+ TY+ LI S
Sbjct: 242 VFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS-GVAPDLYTYNTLISS 300
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------MFAEMEL------ 119
C + +++ + +M G P+ VTYN L+D YG+++ + EME
Sbjct: 301 CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPS 360
Query: 120 -----TLV-----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
+L+ +M+ + +PDV+T L F +G+ D K +E
Sbjct: 361 IVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFE 420
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ + AG QP+I TFN L+ +G G+F +M V E ++ IVT+N ++ FG+ G
Sbjct: 421 EMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNG 480
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ +F+ M+ P T +L+ AY G ++ ++ R + ++ + D +N
Sbjct: 481 MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYN 540
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ A R + + + VL M+ CKP+++TY +++ AY+ NG
Sbjct: 541 AVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA-NG 584
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 2/331 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M GC N +F AL+ +G G F + + E +K +C PD+
Sbjct: 408 KTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIK-ICECVPDI 466
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T++ L+ + +V + +M G P T+NTLI AY R F + +
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRR 526
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML PD+ T N L A G + EK + + +P+ T+ LL +Y
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 586
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+MSA+ E + V ++ + ++ L + E F +R + P TL +
Sbjct: 587 VERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V YG K +L FI +S +N L+ Y R + F + + +L + +G
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 304 CKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
KPD +++ T++ AY NG MK ++ F ++
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 162/328 (49%), Gaps = 2/328 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + A L + ++G + ++T+L++AY +G + +A + + ++ C+
Sbjct: 194 VLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE-GCR 252
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K + K+ L+ M + G+ P+ TYNTLI + R ++ E
Sbjct: 253 PTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAE 312
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + PD T N L +G S + + ++ +++G PSI T+N L+ +Y
Sbjct: 313 VFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYA 372
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G ++ + M K + TY ++ F + G +F MR +P+
Sbjct: 373 RDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNIC 432
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ +G+ G ++ V I + + D V +N L+ +G+ +E+ GV + M
Sbjct: 433 TFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 492
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ G P++ T+ T++ AYS G + A
Sbjct: 493 KRAGFVPERDTFNTLISAYSRCGFFDQA 520
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 161/341 (47%), Gaps = 1/341 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ + +F+ M G +F L+SAY R G FD+A ++ M +
Sbjct: 475 VFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA-GVT 533
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD++TY+ ++ + + +++ + +L++M +PN +TY +L+ AY K M
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ S EP + + + S + E+ + + + G P I T N ++ YG+
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
K + ++ +++ ++ ++ TYN ++ + R ++ E + R + ++ +KP ++
Sbjct: 654 RRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ AY G+ ++ + + + + D + +N + +Y F E V++ M
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ CKP++ TY +++ + ++ A F + +D +
Sbjct: 774 KNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSV 814
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 5/318 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++S G+ G A SLL ++N D+ Y+ LI + + + + + +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRND-GVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 93 GIRPNTVTYNTLIDAYGRAKM-FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G RP +TYN +++ YG+ M ++++ + M S PD++T N + + +
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ +E+ ++AG P T+N LLD YGK+ + V++ M+ ++ +IVTYN +I
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A+ R G L + L M + IKP T +L+ + GK + V + +
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ FN L+ +G F EM V E ++ C PD VT+ T++ + NGM + E
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS---EVS 486
Query: 332 DLVEKMDETCLAMKRPDF 349
+ ++M +R F
Sbjct: 487 GVFKEMKRAGFVPERDTF 504
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+++ GK G ++++ ++ I Y +I A+ G ++ +F+ + E
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 233 RIKPSCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+P+ +T ++ YG G P K+ ++ + +S + D +N L+ + R + E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
V E M+ G PDKVTY ++ Y G +E +++++M+ + A
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVY---GKSRRPREAMEVLKEMEASGFA 358
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 161/317 (50%), Gaps = 7/317 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--TPDCQPDVNTY 66
++A + +++ C N ++ L+ AY SGL +KA ++ MKN P N+Y
Sbjct: 179 KEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSY 238
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKML 125
I +K +K + + M G +P+T TY LI+ YG+ K F +++ +ML
Sbjct: 239 ---INGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKV-FNEML 294
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
S C+P++ T + AF G + E+ +E+ Q AG++P + ++N L+++Y +AG
Sbjct: 295 SHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPY 354
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + MQ +YNI++DA+GRAG L E +F M+ I P+ + L+
Sbjct: 355 GAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL 414
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+ G K +L + S + LDT N +++ YGRL F +M+ VL VM+ C+
Sbjct: 415 SAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE 474
Query: 306 PDKVTYRTMVRAYSTNG 322
D TY ++ Y G
Sbjct: 475 ADISTYNILINRYGQAG 491
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K P KA E+F M +GC +T+++T L++ YG+ G A + M + C+P
Sbjct: 242 LMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEML-SHKCKP 300
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + M G+ P+ +YN L++AY RA
Sbjct: 301 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIF 360
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G ++ E +E + GI P++ + +LL ++ K
Sbjct: 361 SLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT 420
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ K ++ M K N +++ +GR G +ME + +M + + T
Sbjct: 421 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 480
Query: 242 CSLVRAYGHAGKPEKL 257
L+ YG AG +K+
Sbjct: 481 NILINRYGQAGFIDKM 496
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A ++F M+ C N ++TAL++A+ R GL +KA + E M+ +
Sbjct: 276 LYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA-GLE 334
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV +Y+ L+++ +A F + + + S M G P+ +YN L+DAYGRA + E
Sbjct: 335 PDVYSYNALMEAYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEA 393
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M P + + L AF +G + E + +G++ N +L+ YG
Sbjct: 394 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 453
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+ G F KM V+ M+ I TYNI+I+ +G+AG + +ME LF
Sbjct: 454 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF 500
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 3/302 (0%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+D S+ + + DV Y++LI + + F + + ++ + PN TY
Sbjct: 142 WDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYA 201
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI AY + + + E V+M + N + G + E+ + + +
Sbjct: 202 LLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRD 261
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G +PS T+ +L++ YGK G V M + I TY +++AF R G ++
Sbjct: 262 GCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKA 321
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E +F M+ ++P + +L+ AY AG P + + + D +N LVDA
Sbjct: 322 EEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDA 381
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
YGR + + V E M++ G P ++ ++ A+S G + + +D++ +M ++ L
Sbjct: 382 YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG---NVSKCEDILNQMCKSGL 438
Query: 343 AM 344
+
Sbjct: 439 KL 440
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 188/385 (48%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +K E+F M +G + S+TAL++AYGR+G ++ + LL+ MKN
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE-KIS 208
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------------ 107
P + TY+ +I +C + ++ + L ++M +GI+P+ VTYNTL+ A
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 108 -----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+G+ + ++ L +M S PD+ + N L A+
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
SG I + + Q+AG P+ NT+++LL+ +G++G ++ + + M+ +
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA 388
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I+ FG G K++ LF M E I+P T ++ A G G E +L+++
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+DI+ + + +++A+G+ + E M + G P T+ +++ +++ G+
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL- 507
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KE + ++ ++ ++ + R F
Sbjct: 508 --VKESEAILSRLVDSGIPRNRDTF 530
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 154/341 (45%), Gaps = 11/341 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F+ M D G + +++ L+ +G+ +K LL M + PD+ +Y++
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL-PDITSYNV 322
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ K+ + + + M G PN TY+ L++ +G++ + ++ ++M S +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T N + FG G + + I+P + T+ ++ + GK G E
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++YM + Y VI+AFG+A ++ F M PS T SL+ ++
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ ++L + +S I + FN ++AY + F E M++ C PD+
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
T ++ YS F LV++ E MK D
Sbjct: 563 RTLEAVLSVYS----------FARLVDECREQFEEMKASDI 593
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 4/336 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK ++ EK +L M G + S+ LL AY +SG +A + M+ C P
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ-AAGCTP 350
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ NTYS+L+ ++ +D V+ L +M + P+ TYN LI+ +G F E+
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ E+ EPD+ T + A G G + K + + I PS + +++++G+A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E+ M + + +I T++ ++ +F R G +K+ E + + I + T
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + AY GK E+ ++ S D ++ Y + E + E M+
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P + Y M+ Y G + +L+E+M
Sbjct: 591 SDILPSIMCYCMMLAVY---GKTERWDDVNELLEEM 623
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F + + G + ++ L ++M+ C+P+ + Y+I+I + DK + +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV--------------------------- 122
+QG+ + +Y LI+AYGR + E L L+
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRY-ETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 123 ----------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+M E +PD+ T N L A G D E + GI P + T++
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L++++GK EK+ ++ M I +YN++++A+ ++G +K+ +F M++
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ T L+ +G +G+ + + + + +S+ D +N L++ +G F E+
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M + +PD TY ++ A G+ A++
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF MV+E + + +++ ++ A G+ GL + A +L++M D P Y+ +I++
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAF 467
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A +++ + M G P+ T+++L+ ++ R + E E L +++ +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + A+ G+ + K Y + + P T +L Y A ++ E
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA-YGHAG 252
M+ +I+ Y +++ +G+ + L M S R+ + +++ Y
Sbjct: 588 MKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDS 647
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD----- 307
+ + VL +++ L F+N L+DA L VL +RG P+
Sbjct: 648 NWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKN 707
Query: 308 KVTYRTMVRAYSTNGM 323
K+ + V S GM
Sbjct: 708 KLVWSVDVHRMSEGGM 723
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-SWTIVTYNIV 209
++ +C + F++ + S+N F ++ + G +++ + +YMQ+ + Y I+
Sbjct: 91 SIARCLDIFKN---KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIM 147
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I GR G L + +F M S+ + S + +L+ AYG G+ E +L + N I
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207
Query: 270 MLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ +N +++A R E + G+ M+ G +PD VTY T++ A + G+ + A+
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 36/362 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E F + EG T ++ ALL +G++G+F +A S+L M+ +C PD TY+
Sbjct: 310 DEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEEN-NCPPDAVTYNE 368
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEM-ELT 120
++ + ++A ++ ++ M+++GI PN VTY T+I+AYGR +MF +M EL
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 121 LV---------------KMLSED------------CEPDVWTMNCTLRAFGNSGQIDTME 153
V K LSE+ C P+ T N L G G +
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + + ++ G +P +TFN L+ +YG+ G + + E M K +S I TYN +++A
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R GD K E + MR++ +PS + +V +Y G + + + + I + DI
Sbjct: 549 ARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSW 608
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ LV A + + M+ + +Q+ G KPD V +M+ ++ N M + A E L
Sbjct: 609 MLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRL 668
Query: 334 VE 335
+
Sbjct: 669 IH 670
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 2/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
+A E+F+ M + G + ++ +L YG+ G +DK LL+ M++ D T S
Sbjct: 239 HRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSR-GLDFDEFTCS 297
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++ +C + D+ + S + ++G +P TVTYN L+ +G+A +F+E L +M
Sbjct: 298 TVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEEN 357
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C PD T N + A+ +G + + S GI P+ T+ ++++YG+ G +K
Sbjct: 358 NCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKA 417
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M + + TYN V+ G+ ++M + M+ P+ +T +++
Sbjct: 418 LEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAM 477
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G G + + V R + N D FN L+ AYGR + + E M + G P
Sbjct: 478 CGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPC 537
Query: 308 KVTYRTMVRAYSTNG 322
TY ++ A + G
Sbjct: 538 INTYNALLNALARRG 552
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 158/340 (46%), Gaps = 1/340 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + +++F+ M + G + + +F L+SAYGR G + A + E M
Sbjct: 477 MCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKA-GFS 535
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +NTY+ L+ + + + ++++ DM +G RP+ +Y+ ++ +Y + +E+
Sbjct: 536 PCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMI 595
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ D P + + A + ME+ ++ Q G +P + N +L + K
Sbjct: 596 EKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAK 655
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+++ ++ + +VT+N ++D + R GD + E + R++++ KP V+
Sbjct: 656 NNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVS 715
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++++ + G ++ +L + + + +N + Y F E+ V+ M
Sbjct: 716 YNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMI 775
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
C+P+++TY+ + Y + A +F ++ +D+T
Sbjct: 776 VHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDVDDT 815
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 155/333 (46%), Gaps = 2/333 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +LF + + + +++T +L AY R+G + +A + E M N
Sbjct: 196 ILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERM-NESGLS 254
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++DK+ LL +M ++G+ + T +T++ A GR + E
Sbjct: 255 PSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEARE 314
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ SE +P T N L FG +G + + P T+N ++ +Y
Sbjct: 315 FFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYV 374
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG E+ + V++ M VTY +I+A+GR GD+ + +F M P+
Sbjct: 375 RAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVA 434
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G E++ +L + + + + +N ++ G+ + V M
Sbjct: 435 TYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREM 494
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ G +PD+ T+ T++ AY G N A + +
Sbjct: 495 KNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHE 527
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 4/337 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK E+ ++ M GC N ++ +L+ G+ G+ + MKN +
Sbjct: 442 MLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNC-GFE 500
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +T++ LI + + + + + +M G P TYN L++A R + E
Sbjct: 501 PDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESV 560
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M ++ P + + + ++ G + +E + I PS L+ + K
Sbjct: 561 ILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFK 620
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
M + +QK+ Y +V N ++ F + + + RL+ ++P VT
Sbjct: 621 CRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVT 680
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ Y G K VLR + S D V +N ++ + R E +L M
Sbjct: 681 HNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMT 740
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY T + Y+ GM E D++ M
Sbjct: 741 SIGVGPCIFTYNTFISGYAAQGM---FTEINDVISYM 774
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D + +R G Q K ++ + + +L +Y + G + + +
Sbjct: 186 DRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIF 245
Query: 192 EYMQKYHYSWTIVTYNIVIDAF------------------------------------GR 215
E M + S ++VTYN+++D + GR
Sbjct: 246 ERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G + + F ++SE KP VT +L+ +G AG + SVL ++ ++ D V
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N +V AY R E V++ M +G P+ VTY T++ AY G + A E D
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFD 422
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q A E+F A + Q + A++ Y R+G F K LL+ M+ C
Sbjct: 224 VLGKANQEALAVEIF-ARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRER-GCV 281
Query: 61 PDVNTYSILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ +++ LI + +K+ A + AL L+++ GIRP+ +TYNTLI A R E
Sbjct: 282 PDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAV 341
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M S C+PD+WT N + +G + E+ +++ +S G P T+N LL ++
Sbjct: 342 AVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAF 401
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G+ EK+ + E M K + +TYN +I +G+ G Q ++R M+S P
Sbjct: 402 SREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDA 461
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ + G A K E+ +V+ + ++ + ++ L+ AY + E +
Sbjct: 462 VTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNC 521
Query: 299 MQQRGCKPDKVTYRTMV 315
M++ G KPD++ Y M+
Sbjct: 522 MRRSGIKPDRLAYSVML 538
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 3/316 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK--AFSLLEHMKNTPDCQPDVNTYS 67
K EL M + GC + SF L++A +SG + A LL ++ + +PD+ TY+
Sbjct: 267 KVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRS-GIRPDIITYN 325
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + ++ A+ SDM + +P+ TYN +I YGR + E ++ S+
Sbjct: 326 TLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESK 385
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF G + + E+ G T+N ++ YGK G ++
Sbjct: 386 GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ + VTY ++ID+ G+A +++ + M +KP+ T +L+ A
Sbjct: 446 MQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICA 505
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGK E+ + S I D + ++ ++D + R + G+ M + G PD
Sbjct: 506 YAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPD 565
Query: 308 KVTYRTMVRAYSTNGM 323
Y M+ A M
Sbjct: 566 NGLYEVMMHALVRENM 581
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 150/314 (47%), Gaps = 1/314 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ Q + D G + S L A+ ++G + + MK P ++ Y I+++
Sbjct: 866 VIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMK-AAGYFPTMHVYRIMLRLL 924
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K V+ +L +M G +P+ N+++ Y + F M + K+ +PD
Sbjct: 925 CKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDE 984
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + + + + K +S G++P ++T+ L+ ++ K +E+ + E
Sbjct: 985 ETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEE 1044
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ Y Y++++ + +GD ++ E L +M+ I+P+ T+ L+ +YG +G+
Sbjct: 1045 LRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQ 1104
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
PE+ +VL+ + + ++LDT+ ++ ++DAY + F L M++ G +PD +
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTC 1164
Query: 314 MVRAYSTNGMKNHA 327
+RA + + N A
Sbjct: 1165 FIRAATLSEGTNEA 1178
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 157/338 (46%), Gaps = 5/338 (1%)
Query: 1 MLGKCKQPE---KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNT 56
++ +C Q E A ++F M G +++ + ++S Y R L + A LL H KN
Sbjct: 708 LIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNG 767
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
D++ Y ++++ K + K ++L+ + + + + +N LI AY + +
Sbjct: 768 IILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYER 827
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M+ + P V ++N L+A +++ + ++ Q G++ S ++ + L+
Sbjct: 828 ARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLE 887
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ +AG+ ++ + M+ Y T+ Y I++ + ++ +E + M +P
Sbjct: 888 AFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQP 947
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S+++ Y + +G + + I ++ + D +N L+ Y R + E ++
Sbjct: 948 DLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
M+ G +P TYR+++ A++ M A+E F++L
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEEL 1045
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ++ + MV G + ++ ++ YG+ G D+A + MK++ PD TY++
Sbjct: 408 EKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGR-NPDAVTYTV 466
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S KA ++ ++S+M G++P TY+ LI AY +A E E T M
Sbjct: 467 LIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSG 526
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD + L F ++ Y + G P + +++ + + ++ +
Sbjct: 527 IKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVD 586
Query: 189 AVMEYMQK 196
++ M++
Sbjct: 587 RIIRDMEE 594
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/384 (17%), Positives = 149/384 (38%), Gaps = 77/384 (20%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPD--------- 58
+ A ++ + + G + + + F +++S+Y S + +A LLE + + P+
Sbjct: 614 DHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSEACELLEFSREHAPNDIQMITEAL 673
Query: 59 ----CQP--------------------DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
C+ Y LI+ C++ FD + SDM G+
Sbjct: 674 IIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGV 733
Query: 95 R------------------PNTV-------------------TYNTLIDAYGRAKMFAEM 117
P T Y +++ YG+ K++ +
Sbjct: 734 ESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKA 793
Query: 118 ELTLVKMLSEDC---EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E +LV L + C + VW N + A+ SG + + G P++++ N L
Sbjct: 794 E-SLVGSLRQRCSKMDRKVW--NALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGL 850
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L + ++ V++ +Q + + + ++AF +AG+L +++ ++ M++
Sbjct: 851 LQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGY 910
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P+ ++R + + ++L ++ + D N ++ Y ++ F M
Sbjct: 911 FPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGI 970
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAY 318
+ + +Q KPD+ TY T++ Y
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMY 994
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA L M + G + + L+ +YG+SG ++A ++L++++ T D YS +
Sbjct: 1072 KAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTT-GVVLDTLPYSSV 1130
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + LK F L++M GI P+ + I RA +E + +L+
Sbjct: 1131 IDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFI----RAATLSEGTNEAIVLLNA-L 1185
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ + + L + + +++C E+ + + N N L+D
Sbjct: 1186 QDAGFDLPIRLLKEKSESLVSEVDQCLERLEPVEDNAAFNLVNALVD 1232
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK E+F M +G + S+TAL++AYGR+G ++ + LLE MK
Sbjct: 157 LLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKR-ERVS 215
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------------ 107
P++ TY+ +I +C + ++ + L ++M +G++P+ VTYNTL+ A
Sbjct: 216 PNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEM 275
Query: 108 -----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+G+ ++ + L +M SE PD+ + N + A
Sbjct: 276 VFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHA 335
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G I +++ Q+AG P+ +T++ILL+ YGK G ++ + + M++
Sbjct: 336 KLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDAT 395
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I FG G K++ LF + E I P+ T LV A G G E +L +
Sbjct: 396 TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHM 455
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ I+ + ++ L++AYG+ + E M + G K TY +++ ++ G+
Sbjct: 456 NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL- 514
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KEF+ ++ +M E ++ F
Sbjct: 515 --YKEFEAILSRMREYGISRNAKSF 537
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 9/335 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + EK L + M EG + S+ L+ A+ + G +A + + M+ C P
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ-AAGCVP 357
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ +TYSIL+ K +D V+ L M P+ TYN LI +G F E+
Sbjct: 358 NASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLF 417
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ E+ +P++ T + A G G + +K GI PS ++ L+++YG+A
Sbjct: 418 HDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQA 477
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+++ M + TI TYN +I F R G K+ E + MR I + +
Sbjct: 478 ALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSF 537
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA----EMKGVLE 297
++ Y +G+ E+ ++ LD ++ Y CFA E K
Sbjct: 538 SGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVY----CFAGLVDESKEQFI 593
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ G P + Y M+ Y+ NG + A E D
Sbjct: 594 EIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 149/310 (48%), Gaps = 4/310 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F+ + + G + ++ L ++M+ C+P+ + Y+I+I + +K + +M
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
++QG+ + +Y LI+AYGR + L +M E P++ T N + A G +
Sbjct: 175 ASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACAR-GDL 233
Query: 150 D--TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
D + + + + G+QP + T+N LL + G ++ V + M + I TY+
Sbjct: 234 DWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++ FG+ G L+++ L + M SE P + L+ A+ G ++ V + + +
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA 353
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNH 326
+ + ++ L++ YG+ + +++ + M++ +PD TY ++R + G K
Sbjct: 354 GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Query: 327 AKEFQDLVEK 336
F DLV++
Sbjct: 414 VTLFHDLVDE 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A ++ M +G ++++++ L+ AYG++ L+D+A M N +
Sbjct: 440 GKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTM-NEVGSKST 498
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY+ LI + + + + +A+LS M GI N +++ +I+ Y ++ + E V
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M CE D T+ L + +G +D ++ + + +++GI PS+ + ++L Y K G
Sbjct: 559 EMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNG 618
Query: 183 HFEKMSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++ S +++ M K S +I V ++ + + + +EY+F + +E
Sbjct: 619 RWDDASELLDEMIKTRVS-SIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAE 669
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L + G I +C + F++ + S+N F+++ + G +++ +
Sbjct: 82 DVETLINKLSSLPPRGSI---ARCLDIFKN---RLSLNDFSLVFKEFAARGDWQRSLRLF 135
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + Y I+I GR G L++ +F M S+ + S + +L+ AYG
Sbjct: 136 KYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGR 195
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKV 309
G+ E +L + + + + +N +++A R E + G+ M+ G +PD V
Sbjct: 196 NGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLV 255
Query: 310 TYRTMVRAYSTNGMKNHAK-EFQDLVE 335
TY T++ A + G+ + A+ F+ ++E
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIE 282
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK E+F M +G + S+TAL++AYGR+G ++ + LLE MK
Sbjct: 157 LLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKR-ERVS 215
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------------ 107
P++ TY+ +I +C + ++ + L ++M +G++P+ VTYNTL+ A
Sbjct: 216 PNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEM 275
Query: 108 -----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+G+ ++ + L +M SE PD+ + N + A
Sbjct: 276 VFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHA 335
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G I +++ Q+AG P+ +T++ILL+ YGK G ++ + + M++
Sbjct: 336 KLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDAT 395
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I FG G K++ LF + E I P+ T LV A G G E +L +
Sbjct: 396 TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHM 455
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ I+ + ++ L++AYG+ + E M + G K TY +++ ++ G+
Sbjct: 456 NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL- 514
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KEF+ ++ +M E ++ F
Sbjct: 515 --YKEFEAILSRMREYGISRNAKSF 537
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 9/335 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + EK L + M EG + S+ L+ A+ + G +A + + M+ C P
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ-AAGCVP 357
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ +TYSIL+ K +D V+ L M P+ TYN LI +G F E+
Sbjct: 358 NASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLF 417
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ E+ +P++ T + A G G + +K GI PS ++ L+++YG+A
Sbjct: 418 HDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQA 477
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+++ M + TI TYN +I F R G K+ E + MR I + +
Sbjct: 478 ALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSF 537
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA----EMKGVLE 297
++ Y +G+ E+ ++ LD ++ Y CFA E K
Sbjct: 538 SGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVY----CFAGLVDESKEQFI 593
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ G P + Y M+ Y+ NG + A E D
Sbjct: 594 EIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 149/310 (48%), Gaps = 4/310 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F+ + + G + ++ L ++M+ C+P+ + Y+I+I + +K + +M
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
++QG+ + +Y LI+AYGR + L +M E P++ T N + A G +
Sbjct: 175 ASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACAR-GDL 233
Query: 150 D--TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
D + + + + G+QP + T+N LL + G ++ V + M + I TY+
Sbjct: 234 DWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++ FG+ G L+++ L + M SE P + L+ A+ G ++ V + + +
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA 353
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNH 326
+ + ++ L++ YG+ + +++ + M++ +PD TY ++R + G K
Sbjct: 354 GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Query: 327 AKEFQDLVEK 336
F DLV++
Sbjct: 414 VTLFHDLVDE 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A ++ M +G ++++++ L+ AYG++ L+D+A M N +
Sbjct: 440 GKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTM-NEVGSKST 498
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY+ LI + + + + +A+LS M GI N +++ +I+ Y ++ + E V
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M CE D T+ L + +G +D ++ + + +++GI PS+ + ++L Y K G
Sbjct: 559 EMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNG 618
Query: 183 HFEKMSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++ S +++ M K S +I V ++ + + + +EY+F + +E
Sbjct: 619 RWDDASELLDEMIKTRVS-SIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAE 669
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L + G I +C + F++ + S+N F+++ + G +++ +
Sbjct: 82 DVETLINKLSSLPPRGSI---ARCLDIFKN---RLSLNDFSLVFKEFAARGDWQRSLRLF 135
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + Y I+I GR G L++ +F M S+ + S + +L+ AYG
Sbjct: 136 KYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGR 195
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKV 309
G+ E +L + + + + +N +++A R E + G+ M+ G +PD V
Sbjct: 196 NGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLV 255
Query: 310 TYRTMVRAYSTNGMKNHAK-EFQDLVE 335
TY T++ A + G+ + A+ F+ ++E
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIE 282
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 35/358 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TP 57
++G+ +KA ELF+ M + N SFTAL++AYGR+G + + LL MK TP
Sbjct: 83 IMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTP 142
Query: 58 D--------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ QPD+ TY+ L+ +C ++ +
Sbjct: 143 NLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMV 202
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M+ G+ P+++TYN L+D YG+A + L +M PDV N + A+G
Sbjct: 203 FRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGR 262
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+ K +++ Q AG P + TF+ LL++YGK G ++++ + M++ + T
Sbjct: 263 AGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNT 322
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I FG+ G ++ LF + ++P T L+ + G G + + R +
Sbjct: 323 YNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHML 382
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
S + T F L+ AYG ++E M++ GCKPD TY ++ A++ G+
Sbjct: 383 QSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGL 440
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 7/342 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F+ M + G ++ ++ AL+ YG++ + LL M+ + PDV Y+I
Sbjct: 197 EEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNA-PDVVAYNI 255
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI++ +A + + M G P+ VT++TL++AYG+ + E+ L M
Sbjct: 256 LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N ++ FG G + G++P ++T+ LL S GK G +
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAK 375
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ +M + + + T + +I A+G A + Y F M+ KP T +L+ A+
Sbjct: 376 KIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAH 435
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + GS + + I D +N L++A+GR F + M++ C P++
Sbjct: 436 AGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNR 495
Query: 309 VTYRTMVRAYSTNGMKNHAK-EFQDL-----VEKMDETCLAM 344
TY ++ Y T G+ + AK +F DL + +D CL +
Sbjct: 496 HTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLL 537
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%), Gaps = 3/325 (0%)
Query: 9 EKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+KA LF+ M + C N +T ++ GR G+ DKA L E M D + +V +++
Sbjct: 55 QKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMP-LNDVEWNVYSFT 113
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-VKMLS 126
LI + + + LL+ M + + PN +TYNT+I+A + + E L L +M
Sbjct: 114 ALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRH 173
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +PD+ T N L A + G ++ + AG+ P T+N L+D YG+A E
Sbjct: 174 EGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEG 233
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ ++ M++ + +V YNI+I+A+GRAG + +F+ M+ P VT +L+
Sbjct: 234 VGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLE 293
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AYG G +++ + + D +N L+ +G+ F E + + G +P
Sbjct: 294 AYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEP 353
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQ 331
D TY ++ + G+ AK+
Sbjct: 354 DMSTYAGLLYSCGKGGLHKAAKKIH 378
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 2/308 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F+ + + + + KA L ++M+ C+P+ + Y+I+I + DK L DM
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG-Q 148
+ N ++ LI+AYGR L +M E P++ T N + A G +
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLE 160
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + + + + GIQP I T+N LL + G E+ V M + +TYN
Sbjct: 161 WEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNA 220
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++D +G+A + + L R M P V L+ AYG AGK + + + +
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAG 280
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHA 327
D V F+ L++AYG+ C+ E++ + M++RG +PD TY T+++ + G +
Sbjct: 281 CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESI 340
Query: 328 KEFQDLVE 335
F DL++
Sbjct: 341 NLFWDLLD 348
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK---NTPDC 59
G+ + A ++F+ M + GC + +F+ LL AYG+ G +D+ L MK PD
Sbjct: 261 GRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDV 320
Query: 60 -------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+PD++TY+ L+ SC K + +
Sbjct: 321 NTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRH 380
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + P T + LI AYG A +++E M C+PD+ T N + A G
Sbjct: 381 MLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGL 440
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
Y GI ++T+N L++++G+ G F+ M++ S TY
Sbjct: 441 YCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEA 500
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ + AG + + F ++ PS + C L+
Sbjct: 501 LMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLL 537
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 73/242 (30%)
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY--------------------------- 199
+IN F+++ + + ++K + +YMQ++ +
Sbjct: 37 TINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASEL 96
Query: 200 ---------SWTIVTYNIVIDAFGRAGD-------LKQMEY------------------- 224
W + ++ +I+A+GR G L +M+
Sbjct: 97 FEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAK 156
Query: 225 ----------LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
LF MR E I+P +T +L+ A G E+ G V R ++ + ++ D++
Sbjct: 157 GGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSI 216
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+N LVD YG+ + +L M+Q G PD V Y ++ AY G + AK F+ +
Sbjct: 217 TYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQM 276
Query: 334 VE 335
E
Sbjct: 277 QE 278
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M+DEG A+ ++ +L+ A+GR GLFD A M+ C P+ +TY L
Sbjct: 443 EAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEA-RCSPNRHTYEAL 501
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ A FD+ +A D+ G P+ +Y L+ R + + L +ML +
Sbjct: 502 MGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNM 561
Query: 130 EPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ L+ + G +E ++ + G+ ++ +N LL++ G E+
Sbjct: 562 PSIYGVVGGILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERAC 621
Query: 189 AVMEYMQK 196
V +K
Sbjct: 622 RVFAEARK 629
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK E+F M G + SFTAL++AYGR+G + + LL+ MK
Sbjct: 155 VLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKE-RVS 213
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY+ +I SC + ++++ L + M +GI+ + VTYNTL+ A R + E E+
Sbjct: 214 PSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEM 273
Query: 120 T-----------------------------------LVKMLSEDCEPDVWTMNCTLRAFG 144
L +M S PD+ + N L A
Sbjct: 274 VFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHA 333
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
SG I + + Q AG P+ T++ILL+ YG+ G ++ + + M+ +
Sbjct: 334 QSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAA 393
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I+ FG G K++ LF M E ++P+ T L+ A G G E +L +
Sbjct: 394 TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 453
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ + + +++AYG+ + E M + G KP TY ++++ ++ G+
Sbjct: 454 NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGL- 512
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KE + ++ KM ++ +A R F
Sbjct: 513 --YKESEAILLKMGQSGVARNRDTF 535
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 148/337 (43%), Gaps = 36/337 (10%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F + + + G + ++ L ++M+ C+P+ + Y+I+I + +K Q + +M
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMF-AEMEL----------------------------- 119
+ G+ P+ ++ LI+AYGR + + +EL
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLD 232
Query: 120 ------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+M E + D+ T N L A G D E + GI P I T++
Sbjct: 233 WEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSY 292
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L++++GK EK+S +++ M+ I +YN++++A ++G +K+ +FR M+
Sbjct: 293 LVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAG 352
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ T L+ YG G+ + + + + S+ + +N L++ +G F E+
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVV 412
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M + +P+ TY ++ A G+ AK+
Sbjct: 413 TLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKI 449
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F+ M + G + +++ L+ +G+ +K LL+ M++ PD+ +Y++
Sbjct: 269 DEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF-PDITSYNV 327
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ ++ + + + M G PN TY+ L++ YGR + ++ ++M +
Sbjct: 328 LLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSN 387
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+ T N + FG G + + ++P++ T+ L+ + GK G E
Sbjct: 388 TEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAK 447
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ +M + + Y VI+A+G+A ++ F M KP+ T SL++ +
Sbjct: 448 KILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMF 507
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ ++L + S + + FN +++A+ + F E M++ C PD+
Sbjct: 508 AKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDE 567
Query: 309 VTYRTMVRAYSTNGMKNHAKE 329
T ++ Y G+ ++E
Sbjct: 568 QTLEAVLSVYCFAGLVEESEE 588
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 22/338 (6%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ + + +LF M + N ++ L++ +G G F + +L M + +
Sbjct: 366 LYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE-NVE 424
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY LI +C K + + +L M+ +G+ P++ Y +I+AYG+A ++ E +
Sbjct: 425 PNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVA 484
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +P V T N ++ F G E K +G+ + +TFN +++++ +
Sbjct: 485 FNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQ 544
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE+ M+K T V+ + AG +++ E F +++ I PS +
Sbjct: 545 GGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMC 604
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRL--------KCF 289
C ++ Y A + D++ +LD +F N + + + G++ +
Sbjct: 605 YCMMLAVYAKADR----------WDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNW 654
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ V E ++ GC Y T++ A G K A
Sbjct: 655 QMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERA 692
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L + G I +C + F++ + S+N F ++ + + G +++ +
Sbjct: 80 DVETLINKLSSLPPRGSI---ARCLDVFKN---KLSLNDFALVFKEFAQRGDWQRSLRLF 133
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + Y I+I GR G L++ + +F M S + PS + +L+ AYG
Sbjct: 134 KYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGR 193
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC-FAEMKGVLEVMQQRGCKPDKV 309
G+ + +L + + + +N ++++ R + E+ G+ M+ G + D V
Sbjct: 194 NGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIV 253
Query: 310 TYRTMVRAYSTNGMKNHAK 328
TY T++ A + G+ + A+
Sbjct: 254 TYNTLLSACARRGLGDEAE 272
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 2/332 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + ++ ++A F+ M + G + ++ ++ YG+ G ++ L E MK Q
Sbjct: 127 LSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMK-AQGIQ 185
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ I +C ++ L + M + P+ VTYN L+D YG+A + E
Sbjct: 186 PDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANV 245
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M S C P++ T N L AFG +G + + + S GI+P + T+ LL +Y +
Sbjct: 246 LKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSR 305
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG E+ + M+ + + T+N +I G+ + +M +F M++ ++P VT
Sbjct: 306 AGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVT 365
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ A+G G ++ V R + + D FN L++AYGR + + + M
Sbjct: 366 WNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGML 425
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
Q GC PD T+ T++ A + G HA+ D
Sbjct: 426 QAGCTPDLATFNTLLAALAREGRWEHAELILD 457
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 171/337 (50%), Gaps = 7/337 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + E ELF+ M +G + ++ ++A L ++A L MK++ +C PD
Sbjct: 165 KGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS-NCTPDR 223
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM---FAEMELT 120
TY+ L+ KA +++ +L +M + G PN VTYN L+ A+GRA + AEM+ +
Sbjct: 224 VTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDS 283
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+S+ EPDV+T L A+ +G+++ + Y + +++ P+ TFN L+ +GK
Sbjct: 284 ---MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGK 340
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+F +M + E MQ IVT+N ++ AFG+ G ++ +FR M+ +P T
Sbjct: 341 NKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKAT 400
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ AYG G ++ S+ + + D FN L+ A R + + +L+ +
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELN 460
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ KP+ + Y +M+ AY+ G KE D + +
Sbjct: 461 RSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTI 497
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 1/327 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M GC N ++ LLSA+GR+GL + A + + M + +PD
Sbjct: 234 GKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMV-SKGIEPD 292
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ + +A ++ + + M T PN+ T+N LI +G+ K F+EM +
Sbjct: 293 VFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFE 352
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + EPD+ T N L AFG +G + K + + AG +P TFNIL+++YG+ G
Sbjct: 353 DMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ ++ + M + + + T+N ++ A R G + E + + KP+ +
Sbjct: 413 SSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S++ AY + G+ EKL ++ + + + V Y + E + M+
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE 329
G D T+ M+ Y GM + A +
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATD 559
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 165/369 (44%), Gaps = 37/369 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ A E+ +MV +G + + ++T+LLSAY R+G ++A + M+ T +C P
Sbjct: 268 FGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR-TSNCTP 326
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T++ LI K F ++ + DM G+ P+ VT+N+L+ A+G+ M++E+
Sbjct: 327 NSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVF 386
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M EPD T N + A+G G D Y+ AG P + TFN LL + +
Sbjct: 387 RGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALARE 446
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM------------------- 222
G +E +++ + + Y + Y ++ A+ G+L+++
Sbjct: 447 GRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILL 506
Query: 223 ----------------EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
E F MR T +++ YG G +K + +
Sbjct: 507 KTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRS 566
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
+ + D V +NCL+ YGR + + + L G PD V+Y T++ +YS +G + +
Sbjct: 567 TGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSS 626
Query: 326 HAKEFQDLV 334
+ F ++V
Sbjct: 627 ATRIFHEMV 635
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 36/334 (10%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP------------------------ 61
++ +++ GR G ++KA + M+ + + +P
Sbjct: 45 SSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRL 104
Query: 62 -----------DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR 110
DV Y+ LI + + F + M G +P+ VTYN +ID YG+
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164
Query: 111 AKMFAEMELTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
E L L +M ++ +PD +T N + A + + + + + +S+ P
Sbjct: 165 KGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRV 224
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
T+N LLD YGKAG + + + V++ M+ IVTYN ++ AFGRAG + M
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
S+ I+P T SL+ AY AGK E+ + + S+ ++ FN L+ +G+ K F
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNF 344
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+EM + E MQ G +PD VT+ +++ A+ NGM
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGM 378
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK K + +F+ M G + + ++ +LL A+G++G++ + + MK +
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKA-GFE 395
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ILI++ + + D+ ++ M G P+ T+NTL+ A R + EL
Sbjct: 396 PDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELI 455
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQ-------IDTMEKCYEKF-------------- 159
L ++ +P+ L A+ N G+ +DT+ Y F
Sbjct: 456 LDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSK 515
Query: 160 --------------QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ G +TFN ++ YGK G +K + ++ +VT
Sbjct: 516 CSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVT 575
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN ++ +GR G ++ E R + P V+ +++ +Y G+ + +
Sbjct: 576 YNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMV 635
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++ I D+ +N V Y F E V++ M + GCKPD+VTYRT+V AY
Sbjct: 636 SNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAY 688
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 144/314 (45%), Gaps = 3/314 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C ++A ++ M+ GC + +F LL+A R G ++ A +L+ + N +P+
Sbjct: 409 GRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDEL-NRSSYKPN 467
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ ++ + +K++ ++ + T + + T + Y + + E E +
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M D T N + +G G +D + +S G++P + T+N L+ YG+ G
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K A + + +V+YN VI ++ + G L +F M S I+P T
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYN 647
Query: 243 SLVRAYGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ V Y + G PE L SV++ + + D V + LVDAY ++ F E++ +L+ ++
Sbjct: 648 TFVGCYVNGGMFPEAL-SVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Query: 302 RGCKPDKVTYRTMV 315
K YR +
Sbjct: 707 SDPNFSKAAYRRIA 720
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
S + PD T+ LR G Q+ T+ + ++ + G + + L+ + + F+
Sbjct: 75 SVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFK 134
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ E M++ ++VTYN++ID +G+ G + + LF M+++ I+P T +
Sbjct: 135 EALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTA 194
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ A E+ + + +S+ D V +N L+D YG+ + E VL+ M+ GC
Sbjct: 195 ITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGC 254
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
P+ VTY ++ A+ G+ N A E +D
Sbjct: 255 LPNIVTYNELLSAFGRAGLCNAAAEMKD 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK +KA + F + G + + ++ L+ YGR G++ K + L
Sbjct: 547 MYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQT- 605
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ +Y+ +I S K + +M + GI+P++ TYNT + Y MF E
Sbjct: 606 PDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSV 665
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
+ M C+PD T + A+ G+ + +E+ + +S+
Sbjct: 666 VKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q E A +F+ ++EG +F+AL+SAYGRSG D+A + E MK++ +
Sbjct: 194 ILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSS-GLK 252
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P++ TY+ +I +C K F++ + +M G++P+ +T+N+L+ GR ++
Sbjct: 253 PNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARN 312
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ML E D++T N L A GQ+D + + I P++ T++ ++D Y
Sbjct: 313 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYA 372
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++ + M+ V+YN ++ + + G ++ + + M S IK V
Sbjct: 373 KAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAV 432
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ YG GK E++ V + I + + ++ L+D Y + + E V
Sbjct: 433 TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF 492
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
++ G K D V Y ++ A NG+ A F D + K
Sbjct: 493 KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTK 529
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ E A LF M+ G + + ++ LL A + G D AF ++ M P+
Sbjct: 302 GRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK-HIMPN 360
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS +I KA D+ L ++M I + V+YNTL+ Y + F E
Sbjct: 361 VVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCK 420
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S + D T N L +G G+ + +++ +E+ ++ I P++ T++ L+D Y K G
Sbjct: 421 EMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGG 480
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++ V +K +V Y+ +IDA + G ++ M E I+P+ VT
Sbjct: 481 LYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYN 540
Query: 243 SLVRAYGHAGKPE 255
S++ A+G +G E
Sbjct: 541 SIIDAFGRSGSAE 553
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 42/260 (16%)
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+ +I GR + L+E V+ + + A+G SG D K +E +S
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 162 AGIQPSINTFNILLDSYGKAG-HFEKMSAVMEYMQKYHYS------------------WT 202
+G++P++ T+N ++D+ GK G F + + + + M + W
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 203 -----------------IVTYNIVIDAFGRAGDLKQMEYLFRLMRS---ERIKPSCVTLC 242
I TYN ++DA + G QM+ F++M + I P+ VT
Sbjct: 309 AARNLFSEMLYRGIEQDIFTYNTLLDAVCKGG---QMDLAFQIMSEMPRKHIMPNVVTYS 365
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ Y AG+ ++ ++ + + I LD V +N L+ Y +L F E V + M+
Sbjct: 366 TVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS 425
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G K D VTY ++ Y G
Sbjct: 426 GIKKDAVTYNALLGGYGKQG 445
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E+ +F+ M E N +++ L+ Y + GL+ +A + K + D
Sbjct: 442 GKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKA-GLKAD 500
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM--------- 113
V YS LI + K + + L +M+ +GIRPN VTYN++IDA+GR+
Sbjct: 501 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPY 560
Query: 114 ---FAEMELTLVKMLSEDCEPDVWTM--NCTLRAFGNSGQIDTMEKCYEKFQSAG----- 163
++M + +K++ + E +V N ++ FG Q+ + C+ K ++ G
Sbjct: 561 ETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFG---QLAAEKTCHAKKENRGRQEIL 617
Query: 164 -------------IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
I+P++ TF+ +L++ + FE S ++E ++ +
Sbjct: 618 CILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 664
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 206 YNIVIDAFGRAGDLKQME--YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
Y ++ G G+ + + F + R +R +++ G G+ E +V
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFET 210
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
N F+ L+ AYGR E V E M+ G KP+ VTY ++ A G+
Sbjct: 211 ALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGV 270
Query: 324 KNHAKEFQDLVEKMDETCLAMKRPD 348
+F E DE +PD
Sbjct: 271 -----DFNRAAEIFDEMLRNGVQPD 290
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 11/324 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQP 61
G+C++ A ++FQAM GC N ++ ++ A G+ G+ KA + E M+ +P
Sbjct: 248 GRCRE---ALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQK-EGVEP 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++ LI C + ++ Q + ++M +GI + TYNTLIDA + +MEL
Sbjct: 304 DRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKG---GQMELAA 360
Query: 122 VKMLS---EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M S ++ P+V T + + +G G + Y + +G++P ++N L+D Y
Sbjct: 361 SIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIY 420
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G F+ + M++ +VTYN +IDA+G+ G K LF M++E + P+
Sbjct: 421 AKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV 480
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +L+ AY AG + S+ + + D V ++ L+D+ + + +L+
Sbjct: 481 LTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQE 540
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M Q G +P+ VTY +++ AY NG
Sbjct: 541 MTQAGIQPNIVTYNSLIDAYGRNG 564
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 29/298 (9%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E+A L+ M + G + S+ L+ Y + G FD A + + M+ + D
Sbjct: 386 GKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV-GLKAD 444
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI + K + L M +G+ PN +TY+ LIDAY +A M + V
Sbjct: 445 VVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFV 504
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ +PDV + + + G ++ ++ AGIQP+I T+N L+D+YG+ G
Sbjct: 505 EFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNG 564
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + A N+ I+ F + GD RS I C TL
Sbjct: 565 QVDNVEA--------------AKGNMPINVFNKVGD-----------RSTEI--ICKTLT 597
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S A H G + SV + + + V F+ +++A R E +LE M+
Sbjct: 598 SQQNANDHTGVLAAV-SVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMR 654
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKMSAV 190
+V+ + + A+G SG+ K ++ + AG +P++ T+N ++D+ GK G +K +
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDI 292
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E MQK +T+N +I R + + +F M+ I+ T +L+ A
Sbjct: 293 FEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCK 352
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ E S++ + +I + V ++ ++D YG+L CF E G+ M++ G +PD+V+
Sbjct: 353 GGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVS 412
Query: 311 YRTMVRAYSTNG 322
Y T++ Y+ G
Sbjct: 413 YNTLIDIYAKLG 424
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 140 LRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTF-NILLDSYGKAGHFEKMSAVMEYMQKY 197
LR GN G+ + + YE Q ++ + +I++ + G+ G E V QK
Sbjct: 169 LRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKA 228
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-KPEK 256
+ + Y+ ++ A+GR+G ++ +F+ M+ KP+ +T +++ A G G +K
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK 288
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ + + D + FN L+ R + + + V MQ+RG + D TY T++
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLID 348
Query: 317 AYSTNG 322
A G
Sbjct: 349 AVCKGG 354
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
+RSE K + + + +L G GK E V + + ++ +V AYGR
Sbjct: 194 LRSEWSKLASIMISTL----GRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGR 249
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
E V + M++ GCKP+ +TY T++ A G+ K+ D+ E+M + + R
Sbjct: 250 CREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVD--LKKALDIFEEMQKEGVEPDRIT 307
Query: 349 F 349
F
Sbjct: 308 F 308
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 161/309 (52%), Gaps = 2/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M G N+ F+ +L++Y G + K+F +L M+N+ PD + Y++
Sbjct: 378 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS-GVSPDRHFYNV 436
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K D A M +G++P+ VT+NTLID + ++ + E M
Sbjct: 437 MIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESG 496
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P T N + +FG + + ++ K QS G+ ++ T+ L+D YG++G F+
Sbjct: 497 CSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAI 556
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+ + YN +I+A+ + G +Q FR+MR++ +KPS + L SL+ A+
Sbjct: 557 ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAF 616
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + SVL+++ +D+ D V + L+ A R++ F ++ V E M GC PD+
Sbjct: 617 GEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDR 676
Query: 309 VTYRTMVRA 317
R M+R+
Sbjct: 677 KA-RAMLRS 684
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 36/351 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + E+A +F+ + + G T+++ ALL Y ++G A S++ M+ + P
Sbjct: 301 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS-GFSP 359
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +TYS+LI + A ++ + +L +M G+RPN+ ++ ++ +Y + + L
Sbjct: 360 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL 419
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PD N + FG +D +++ + G+QP T+N L+D + K+
Sbjct: 420 REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 479
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF---------------------------- 213
GH K + E MQ+ S TYNI+I++F
Sbjct: 480 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539
Query: 214 -------GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
G++G K +M+S +KPS +L+ AY G E+ + R +
Sbjct: 540 TTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRA 599
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + N L++A+G + AE VL+ M++ KPD VTY T+++A
Sbjct: 600 DGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKA 650
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 152/314 (48%), Gaps = 2/314 (0%)
Query: 15 FQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
F AMV G T + A+++A G +G ++A ++ E +K P Y+ L+K
Sbjct: 278 FLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEG-GLMPRTRAYNALLKGY 336
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+K + ++++S+M G P+ TY+ LIDAY A + + L +M + P+
Sbjct: 337 VKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNS 396
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + L ++ + G+ + + +++G+ P + +N+++D++GK + A +
Sbjct: 397 YVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDR 456
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ VT+N +ID ++G + E LF M+ P T ++ ++G +
Sbjct: 457 MRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQER 516
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
E + ++L + + ++ + V + LVD YG+ F + LEVM+ G KP Y
Sbjct: 517 WEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNA 576
Query: 314 MVRAYSTNGMKNHA 327
++ AY+ G+ A
Sbjct: 577 LINAYAQRGLSEQA 590
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 46/348 (13%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
++ L+ A GRS +AF L + TP TY+ LI +C + +K L+S M
Sbjct: 157 YSILIHALGRSEKLYEAFLLSQRQTLTP------LTYNALIGACARNDDLEKALNLMSRM 210
Query: 90 STQGIRPNTVTYNTLIDAYGRA---------KMFAEME---------------------- 118
G + V Y+ +I + R K++AE+E
Sbjct: 211 RRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSG 270
Query: 119 -----LTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
++ + M+ + P T+ + A GN+G+ + E +E+ + G+ P +N
Sbjct: 271 DVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYN 330
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y K G + +++ M++ +S TY+++IDA+ AG + + + M +
Sbjct: 331 ALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS 390
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
++P+ ++ +Y GK +K VLR + NS + D F+N ++D +G+ C
Sbjct: 391 GVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHA 450
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ M+ G +PD VT+ T++ + +G N A+E L E M E+
Sbjct: 451 LATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE---LFEAMQES 495
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 151/324 (46%), Gaps = 7/324 (2%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+++ + + + + Q ++ + +SG ++A S L ++ P T +I
Sbjct: 241 QKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGN-GLSPKTATLVAVIT 299
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+ A ++ +A+ ++ G+ P T YN L+ Y + + E + +M P
Sbjct: 300 ALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSP 359
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T + + A+ N+G+ ++ ++ +++G++P+ F+ +L SY G ++K V+
Sbjct: 360 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL 419
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+ S YN++ID FG+ L F MR E ++P VT +L+ + +
Sbjct: 420 REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 479
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G K + + S T +N +++++G + + ++K +L MQ +G + VTY
Sbjct: 480 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVE 335
T+V Y +G F+D +E
Sbjct: 540 TTLVDIYGQSG------RFKDAIE 557
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 170/349 (48%), Gaps = 8/349 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +A ELF M+ G + SF +++ AY R GLF KA+ + E M + Q
Sbjct: 19 VLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMYEDMVES-GIQ 77
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
D T S L+ K + + + S + GI P TYNTL+ R +
Sbjct: 78 ADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKE 137
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++M + P++ T N L G++ + Y++ AG++P++ T+ L+ Y
Sbjct: 138 LEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYC 197
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A ++ V M++ ++ Y+++I +G+AG ++ +FR ++++ P+ V
Sbjct: 198 RASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVV 257
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C L++A+G GK +++G+ + S + D +N ++ AYGR + + M
Sbjct: 258 TWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRM 317
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Q +G P+ V+Y TM++AY H+K+ D +D+ A PD
Sbjct: 318 QAQGISPNAVSYDTMIQAYC------HSKQAADAQIVLDQMTRAGFSPD 360
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 115/316 (36%), Gaps = 74/316 (23%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG------ 147
++PN TY ++ GRA + + +MLS E + + N + A+ G
Sbjct: 6 LKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAW 65
Query: 148 ------------------------------QIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++T EK + K + GI P + T+N LL
Sbjct: 66 RMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSV 125
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ GH E+ + MQ+ I+T+N ++ + G LK+ +++ + +KP+
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185
Query: 238 CVTLCSLVR-----------------------------------AYGHAGKPEKLGSVLR 262
VT LV+ YG AG E+ V R
Sbjct: 186 VVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFR 245
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N + + V + CL+ A+G E+ M GC PD Y M+ AY G
Sbjct: 246 QLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYG 305
Query: 323 MKNHAKEFQDLVEKMD 338
H+ + L +M
Sbjct: 306 ---HSVQAAILFRRMQ 318
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 180/385 (46%), Gaps = 40/385 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK ++F+ M G + S+TAL+++YGR+G ++ + LLE MK
Sbjct: 152 LLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKK-ERVS 210
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNT---------------- 103
P + TY+ +I SC + ++ + L ++M +GI+P+ VTYNT
Sbjct: 211 PSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEM 270
Query: 104 -------------------LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+D +G+ ++ L +M S P++ + N L A+
Sbjct: 271 VFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYA 330
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G I+ + Q AG P+ T++ILL YGK G ++++ + M+ +
Sbjct: 331 RIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAA 390
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +ID FG G K++ LF M E ++P+ T L+ A G G + +L +
Sbjct: 391 TYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHM 450
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ + + +++AYG+ + E L M + G KP TY T++ ++ G+
Sbjct: 451 SEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGL- 509
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
KE + ++ KM + +A +R F
Sbjct: 510 --YKETEAILLKMGDFGVARERDSF 532
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F + + + G + ++ L +HM+ C+P+ + Y+I+I + +K + +M
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEM 169
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV--------------------------- 122
G+ + +Y LI++YGR + E+ L L+
Sbjct: 170 GAHGVSRSVFSYTALINSYGRNGKY-EVSLELLERMKKERVSPSILTYNTVINSCARGGL 228
Query: 123 ----------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+M E +PD+ T N L A N G D E + G+ P I T+
Sbjct: 229 DWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYT 288
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D++GK +K+S +++ M I +YN++++A+ R G+++ +FRLM+
Sbjct: 289 YLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ T L+ YG G+ +++ + + S+ D +N L+D +G F E+
Sbjct: 349 GCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEV 408
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M + +P+ TY ++ A G+ + AK+
Sbjct: 409 VTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKI 446
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 1/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + +K EL + M G S+ LL AY R G + A + M+ C P
Sbjct: 294 FGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEA-GCVP 352
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSIL+ K +D+V+ L +M P+ TYNTLID +G F E+
Sbjct: 353 NAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLF 412
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M E+ EP++ T + A G G D +K G+ PS + ++++YG+A
Sbjct: 413 HDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQA 472
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E+ + M + TI TYN +I F R G K+ E + M + +
Sbjct: 473 AMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSF 532
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ + G+ E+ ++ S ++ D ++ Y E + ++
Sbjct: 533 NGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKA 592
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G P+ + Y M+ Y+ + N A E D
Sbjct: 593 SGILPNVMCYCMMLAVYAKSDRWNEAYELLD 623
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F+ M + GC N ++++ LL YG+ G +D+ L MK + +PD TY+
Sbjct: 336 EDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMK-VSNTEPDAATYNT 394
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + F +V L DM+ + + PN TY LI A G+ + + + L+ M +
Sbjct: 395 LIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKG 454
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + A+G + + G +P+I T+N L+ + + G +++
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETE 514
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M + + ++N VI+ F + G ++ + M R+ P TL +++ Y
Sbjct: 515 AILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVY 574
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
AG ++ + I S I+ + + + ++ Y + + E +L+ M
Sbjct: 575 CIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L + G I +C + F++ + S+N F ++ + + G +++ +
Sbjct: 77 DVETLINKLSSLPPRGSI---ARCLDVFKN---KLSLNDFALVFKEFAQRGDWQRSLRLF 130
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++MQ+ + Y I+I GR G L++ +F M + + S + +L+ +YG
Sbjct: 131 KHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGR 190
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKV 309
GK E +L + + + +N ++++ R E + G+ M+ G +PD V
Sbjct: 191 NGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIV 250
Query: 310 TYRTMVRAYSTNGMKNHAK 328
TY T++ A S G+ + A+
Sbjct: 251 TYNTLLCACSNRGLGDEAE 269
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M D G SF ++ + + G F++A M+ + + ++L C+
Sbjct: 520 MGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGL 579
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ V+ ++ GI PN + Y ++ Y ++ + E L +ML+ +
Sbjct: 580 VDESVEQF-QEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVIG 638
Query: 138 CTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQ 195
++ F + +E ++K S G + +N LL++ G E+ V+ E +
Sbjct: 639 QMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEATK 698
Query: 196 KYHY 199
+ H+
Sbjct: 699 RGHF 702
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 13/328 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +Q A E+F EG A Q F A++ Y RSG FD A LL+ M +
Sbjct: 197 VLGRARQDSIAEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDR-GID 253
Query: 61 PDVNTYSILIKS-----CLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ +++ LI + CL A A D LL ++ G+RP+ +TYNTLI A ++
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALD----LLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ +M++ +C PD+WT N + G G+ + E+ + + G P T+N L
Sbjct: 310 EDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSL 369
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L ++ K G+ +K+ E + K + +TYN +I +G+ G L L+ MR+
Sbjct: 370 LYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGC 429
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P VT ++ + G K + G VL + ++ + V F+ L+ AY + A+ +
Sbjct: 430 TPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEK 489
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ M G KPD++ Y M+ ++ +G
Sbjct: 490 TFDCMIASGVKPDRLAYLVMLDVFARSG 517
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 153/347 (44%), Gaps = 38/347 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M+ G S ++ A G D+ + ++ +++ D + +T +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDM-DFKISKSTVLL 855
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + KA +V + + M G PN Y ++ F ++EL + +M
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN---------------- 172
+PD+ N L + +G D + Y+ AG++P +T+N
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975
Query: 173 ILLDSYGKAGHFEKMSA-------------------VMEYMQKYHYSWTIVTYNIVIDAF 213
LL+ GK G K+ + + E M+ Y Y++++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ + E L +M+ + I+P+ T+ L+ +YG AG+P + +VL + +S + + T
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVST 1095
Query: 274 VFFNCLVDAYGRLKCF-AEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ + DAY + + +K +LE M++ G +PD + +RA S
Sbjct: 1096 LPYSTVFDAYLKNGDYDLGIKKLLE-MKRDGVEPDHQVWTCFIRAAS 1141
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 144/357 (40%), Gaps = 38/357 (10%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE AH L + G N S ++ AYG L+ +A L++ ++ D +
Sbjct: 726 PETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGI--DRRIW 783
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + ++ ++K +A+ +M G P + N ++ A E+ + + ++
Sbjct: 784 NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQD 843
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE----------------------------- 157
D + T+ L AF +G + + K Y
Sbjct: 844 MDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRD 903
Query: 158 ------KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + AG +P ++ FN LL+ Y AG+F++ + V + + + TYN +I
Sbjct: 904 VELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIV 963
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ R+ ++ L M + P + SL+ A A E+ + + + L
Sbjct: 964 MYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQL 1023
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ ++ ++ Y ++ + +L VM++ G +P T ++ +Y T G + A+
Sbjct: 1024 NRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAE 1080
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 37/291 (12%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT-------------------- 103
N Y LI ++A F + + DM GI + Y +
Sbjct: 676 NLYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDD 735
Query: 104 ----------------LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+I+AYG K++ + E+ LVK L + D N + A+ SG
Sbjct: 736 ALQSGIPLNILSCRVIIIEAYGNIKLWQQAEI-LVKGLRQASGIDRRIWNALIHAYAESG 794
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ ++ G P++++ N ++ + G +++ V+ +Q + + T
Sbjct: 795 LYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVL 854
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++DAF +AGD+ ++ ++ M++ P+ S+ H + + ++ ++ +
Sbjct: 855 LMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGA 914
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
D FN L++ Y F V + + + G +PD+ TY T++ Y
Sbjct: 915 GFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+PE+ L M G QS+ +LL+A ++ L ++A L E M+ + Q + + Y
Sbjct: 970 RPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMR-SKSYQLNRSIY 1028
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++K A K + LL+ M GI P T + L+ +YG A E E L + S
Sbjct: 1029 HMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKS 1088
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
E + A+ +G D K + + G++P
Sbjct: 1089 SSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEP 1128
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + A E+F+ M G + ++TALLS Y + GL +A++L E MK C
Sbjct: 39 ILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK-GCS 97
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TY+ LI +C K A+ + L +M G++PN +TYN +++A +F
Sbjct: 98 PNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQ 157
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + +C P+V + + + G SG++D + +E+ + G P+ T+N LL +Y
Sbjct: 158 ILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYA 217
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G +EK + M+ + TYN VID GR G + E +F M+ + P V
Sbjct: 218 REGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRV 277
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ AY + + +L+ + + D +N L+DA G+ +E + +
Sbjct: 278 TYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHEL 337
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G P+ V++ ++ Y G
Sbjct: 338 KAAGHSPNLVSFSALINMYGRLG 360
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++S GR G A + E M P V+ Y+ L+ K + AL M +
Sbjct: 36 IISILGREGKLGLAREIFEGMSKA-GVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G PN +TYNTLI+A CT RA+ ++ +
Sbjct: 95 GCSPNVLTYNTLINA------------------------------CTKRAY----RLPDL 120
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+E+ + AG+QP+ T+N ++++ F+ S +++ M+ + +++Y +I++
Sbjct: 121 VGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINS 180
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
GR+G L + LF M+ P+ T SL++AY G+ EK + +++ + D
Sbjct: 181 LGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPD 240
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N ++D GR FAE +GV MQ++GC PD+VTY TM+ AYS + A+ D
Sbjct: 241 LYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRAR---D 297
Query: 333 LVEKM 337
L++ M
Sbjct: 298 LLKTM 302
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA LF M DEGC + ++ ++ GR GLF +A + M+ C PD TY+
Sbjct: 223 EKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRK-GCTPDRVTYNT 281
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K + + LL M G P+ TYN L+DA G+A +E ++ +
Sbjct: 282 MLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAG 341
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P++ + + + +G G + E+ + + ++ G P+ + L++SY G ++ +
Sbjct: 342 HSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMYKVLC 401
Query: 189 AV 190
+
Sbjct: 402 CI 403
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 41/224 (18%)
Query: 119 LTLVKMLSEDCEPDVWTMNCT--LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L + + L E E ++ NC + G G++ + +E AG+ PS++ + LL
Sbjct: 14 LQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLS 73
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSERIK 235
Y K G ++ A+ E M++ S ++TYN +I+A RA L + LF M+ ++
Sbjct: 74 GYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQ 133
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ +T +NC+V+A L F +
Sbjct: 134 PNDIT-----------------------------------YNCMVNACVCLSLFDTASQI 158
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
L+ M+ C P+ ++Y TM+ + +G + A E L E+M E
Sbjct: 159 LKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVE---LFEEMKE 199
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 217 GDLKQMEYLFRLMRS----ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G +Q +FR ++ E + +CVT+ S++ G GK + + + +
Sbjct: 8 GARRQALQVFRFLQEHLEYELKEHNCVTIISIL---GREGKLGLAREIFEGMSKAGVAPS 64
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ L+ Y + E + E M+++GC P+ +TY T++ N A D
Sbjct: 65 VHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLI-----NACTKRAYRLPD 119
Query: 333 LVEKMDETCLAMKRPD 348
LV +E A +P+
Sbjct: 120 LVGLFEEMKQAGVQPN 135
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A ++F + G N SF+AL++ YGR G F++A M+ T C P+
Sbjct: 322 GKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRAT-GCVPN 380
Query: 63 VNTYSILIKS 72
Y L+ S
Sbjct: 381 ATAYCGLMNS 390
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 13/328 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +Q A E+F EG A Q F A++ Y RSG FD A LL+ M +
Sbjct: 197 VLGRARQDSIAEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDR-GID 253
Query: 61 PDVNTYSILIKS-----CLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ +++ LI + CL A A D LL ++ G+RP+ +TYNTLI A ++
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALD----LLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ M++ +C PD+WT N + G G+ + E+ + + G P T+N L
Sbjct: 310 EDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSL 369
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L ++ K G+ +K+ E + K + +TYN +I +G+ G L L+ MR+
Sbjct: 370 LYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGC 429
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P VT ++ + G + + G VL + ++ + + F+ L+ AY + A+ +
Sbjct: 430 TPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAEN 489
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ M G KPD++ Y M+ ++ +G
Sbjct: 490 TFDCMIASGVKPDRLAYLVMLDVFARSG 517
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 151/346 (43%), Gaps = 36/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M+ G S ++ A G D+ + ++E +++ + + +T +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM-NFKISKSTVLL 855
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + KA +V + + M G PN Y ++I F ++EL + +M
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN---------------- 172
+PD+ +N L + +G D + Y AG++P +T+N
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 173 ILLDSYGKAGHFEKMSA-------------------VMEYMQKYHYSWTIVTYNIVIDAF 213
LL+ GK G K+ + + E M+ Y Y++++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ + E L +M+ + I+P+ T+ L+ +YG AG+P + +VL + +S + + T
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVST 1095
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ + DAY + + L M++ G +PD + +RA S
Sbjct: 1096 LPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-DAYGRAKMFAEMELTLVKML 125
SI+ C F + L+ D GI N ++ +I +AYG+ K++ + E+ LVK L
Sbjct: 715 SIISTYCKLGFP-ETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI-LVKGL 772
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ D N + A+ SG + ++ G P++++ N ++ + G +
Sbjct: 773 RQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLD 832
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ V+E +Q ++ + T +++DAF +AGD+ ++ ++ M++ P+ S++
Sbjct: 833 ELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI 892
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
H + + ++ ++ + D N L++ Y F V + + G +
Sbjct: 893 SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLE 952
Query: 306 PDKVTYRTMVRAY 318
PD+ TY T++ Y
Sbjct: 953 PDEDTYNTLIVMY 965
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 39/331 (11%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE AH L + G N S ++ AYG+ L+ +A
Sbjct: 726 PETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQA-------------------- 765
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
IL+K +A D+ +N LI AY + ++ + M+
Sbjct: 766 EILVKGLRQASGIDRR-----------------IWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P V ++N +RA G++D + E+ Q + S +T +LLD++ KAG +
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ Y + Y +I + +E + M KP L +L+
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AG ++ V R I + + D +N L+ Y R E +L M +RG P
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+Y++++ A + ++ A + F+++ K
Sbjct: 989 KLQSYKSLLAASAKAELREQADQIFEEMRSK 1019
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+PE+ L M G QS+ +LL+A ++ L ++A + E M+ + Q + + Y
Sbjct: 970 RPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR-SKSYQLNRSIY 1028
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++K A K + LL+ M GI P T + L+ +YG A E E L + S
Sbjct: 1029 HMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKS 1088
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
E + A+ +G + + + G++P
Sbjct: 1089 SSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEP 1128
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 13/328 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +Q A E+F EG A Q F A++ Y RSG FD A LL+ M +
Sbjct: 197 VLGRARQDSIAEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDR-GID 253
Query: 61 PDVNTYSILIKS-----CLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ +++ LI + CL A A D LL ++ G+RP+ +TYNTLI A ++
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALD----LLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ M++ +C PD+WT N + G G+ + E+ + + G P T+N L
Sbjct: 310 EDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSL 369
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L ++ K G+ +K+ E + K + +TYN +I +G+ G L L+ MR+
Sbjct: 370 LYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGC 429
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P VT ++ + G + + G VL + ++ + + F+ L+ AY + A+ +
Sbjct: 430 TPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAEN 489
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ M G KPD++ Y M+ ++ +G
Sbjct: 490 TFDCMIASGVKPDRLAYLVMLDVFARSG 517
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 151/346 (43%), Gaps = 36/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M+ G S ++ A G D+ + ++E +++ + + +T +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM-NFKISKSTVLL 855
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + KA +V + + M G PN Y ++I F ++EL + +M
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN---------------- 172
+PD+ +N L + +G D + Y AG++P +T+N
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 173 ILLDSYGKAGHFEKMSA-------------------VMEYMQKYHYSWTIVTYNIVIDAF 213
LL+ GK G K+ + + E M+ Y Y++++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ + E L +M+ + I+P+ T+ L+ +YG AG+P + +VL + +S + + T
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVST 1095
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ + DAY + + L M++ G +PD + +RA S
Sbjct: 1096 LPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-DAYGRAKMFAEMELTLVKML 125
SI+ C F + L+ D GI N ++ +I +AYG+ K++ + E+ LVK L
Sbjct: 715 SIISTYCKLGFP-ETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI-LVKGL 772
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ D N + A+ SG + ++ G P++++ N ++ + G +
Sbjct: 773 RQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLD 832
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ V+E +Q ++ + T +++DAF +AGD+ ++ ++ M++ P+ S++
Sbjct: 833 ELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI 892
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
H + + ++ ++ + D N L++ Y F V + + G +
Sbjct: 893 SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLE 952
Query: 306 PDKVTYRTMVRAY 318
PD+ TY T++ Y
Sbjct: 953 PDEDTYNTLIVMY 965
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 39/331 (11%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE AH L + G N S ++ AYG+ L+ +A
Sbjct: 726 PETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQA-------------------- 765
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
IL+K +A D+ +N LI AY + ++ + M+
Sbjct: 766 EILVKGLRQASGIDRR-----------------IWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P V ++N +RA G++D + E+ Q + S +T +LLD++ KAG +
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ Y + Y +I + +E + M KP L +L+
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AG ++ V R I + + D +N L+ Y R E +L M +RG P
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+Y++++ A + ++ A + F+++ K
Sbjct: 989 KLQSYKSLLAASAKAELREQADQIFEEMRSK 1019
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+PE+ L M G QS+ +LL+A ++ L ++A + E M+ + Q + + Y
Sbjct: 970 RPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR-SKSYQLNRSIY 1028
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++K A K + LL+ M GI P T + L+ +YG A E E L + S
Sbjct: 1029 HMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKS 1088
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
E + A+ +G + + + G++P
Sbjct: 1089 SSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEP 1128
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 3/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + +++ C ++ L+ AY SGL +KA ++ M+N V Y+
Sbjct: 172 KEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAV-VYNA 230
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLSE 127
I +K DK + + M +P T TY LI+ YG+A K F ++L +M+S
Sbjct: 231 YINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKL-FHEMMSH 289
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
DC+P++ T + AF G + E+ +E+ Q AG++P + +N L+++Y +AG+
Sbjct: 290 DCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGA 349
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + MQ +YNI++DA+G+AG E +F+ M+ I P+ + L+ A
Sbjct: 350 AEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSA 409
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y G K +L + S + LDT N +++ YGRL F +M+ VL VM++ D
Sbjct: 410 YSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVAD 469
Query: 308 KVTYRTMVRAYSTNG 322
TY ++ Y G
Sbjct: 470 ISTYNILINRYGQAG 484
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 3/333 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M + G ++ + A ++ + G DKA + + MK C+P TY++
Sbjct: 207 EKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDA-CKPTTETYTM 265
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA L +M + +PN TY L++A+ R + + E +M
Sbjct: 266 LINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 325
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + A+ +G + + Q G +P ++NIL+D+YGKAG +
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAE 385
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV + M++ + T+ ++ +++ A+ + G + + E + M +K L S++ Y
Sbjct: 386 AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLY 445
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ K+ VLR ++ + D +N L++ YG+ M+ + +++ +G KPD
Sbjct: 446 GRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDV 505
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
VT+ + + AYS K + K + E +D+ C
Sbjct: 506 VTWTSRIGAYSKK--KLYLKCLEIFEEMIDDGC 536
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA E+F+ M + C T+++T L++ YG++G A L M + DC+P
Sbjct: 235 LMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMM-SHDCKP 293
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + M G+ P+ YN L++AY RA
Sbjct: 294 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIF 353
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G D E ++ + GI P++ + +LL +Y K
Sbjct: 354 SLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKM 413
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++ M K N +++ +GR G +ME + R+M T
Sbjct: 414 GSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTY 473
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ YG AG E++ + + + + + D V + + AY + K + + + E M
Sbjct: 474 NILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMID 533
Query: 302 RGCKPDKVTYRTMVRAYST 320
GC PD T + ++ A S
Sbjct: 534 DGCYPDGGTAKVLLAACSN 552
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 1/248 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A +LF M+ C N ++TAL++A+ R GL +KA + E M+ +
Sbjct: 269 LYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA-GLE 327
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ L+++ +A + S M G P+ +YN L+DAYG+A + E
Sbjct: 328 PDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAV 387
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M P + + L A+ G ++ E+ + +G++ N +L+ YG+
Sbjct: 388 FKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGR 447
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F KM V+ M+K Y I TYNI+I+ +G+AG +++ME LF+L+ S+ +KP VT
Sbjct: 448 LGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVT 507
Query: 241 LCSLVRAY 248
S + AY
Sbjct: 508 WTSRIGAY 515
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ M + G + + ++ AL+ AY R+G A FSL++HM C+PD +
Sbjct: 312 EKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHM----GCEPDRAS 367
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+IL+ + KA D +A+ DM GI P ++ L+ AY + + E L +M
Sbjct: 368 YNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMC 427
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ D + +N L +G GQ ME+ + I+T+NIL++ YG+AG E
Sbjct: 428 KSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIE 487
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+M + + + +VT+ I A+ + + +F M + P T L+
Sbjct: 488 RMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLL 547
Query: 246 RAYGHAGKPEKLGSVLR 262
A + + E++ +V+R
Sbjct: 548 AACSNEDQTEQVTTVIR 564
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 124/288 (43%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+D S+ + +PDV Y++LI++ + + + ++ + P TY
Sbjct: 135 WDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYA 194
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI AY + + + E +M + N + G D E+ +++ +
Sbjct: 195 LLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKD 254
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
+P+ T+ +L++ YGKAG + M + I TY +++AF R G ++
Sbjct: 255 ACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKA 314
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E +F M+ ++P +L+ AY AG P + + + D +N LVDA
Sbjct: 315 EEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDA 374
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
YG+ + + V + M++ G P ++ ++ AYS G N +E
Sbjct: 375 YGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEI 422
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 36/224 (16%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ L+ AYG++G D A ++ + MK P + ++
Sbjct: 346 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRV-GITPTMKSHM 404
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV---------------------------- 99
+L+ + K + +K + +L+ M G++ +T
Sbjct: 405 VLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG 464
Query: 100 -------TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
TYN LI+ YG+A ME + S+ +PDV T + A+
Sbjct: 465 SYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKC 524
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ +E+ G P T +LL + E+++ V+ M K
Sbjct: 525 LEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHK 568
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 2/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++P++A E+ + M G + ++ +L+SAY R GL +A L + M +PD
Sbjct: 334 GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEK-GIKPD 392
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ KA + + +M G +PN T+N LI +G FAEM
Sbjct: 393 VFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFE 452
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ +C PD+ T N L FG +G + +++ + AG P +TFN L+ +Y + G
Sbjct: 453 EIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 512
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ AV + M + + + +YN V+ A R G +Q E +F M+ R KP+ +T C
Sbjct: 513 SFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYC 572
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY ++ + E++ ++ I + V LV + E + E ++++
Sbjct: 573 SLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKK 632
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD T M+ Y M A E + + +
Sbjct: 633 GS-PDLSTLNAMIAIYGRRQMVAKANEILNFMNE 665
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M +EGC ++ +L+ YG+ G+ S L H + PD TY+ LI C
Sbjct: 239 VFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCC 298
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------MFAEMEL------- 119
+ +++ + +M G P+ VT+NTL+D YG+++ + EME
Sbjct: 299 RRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSI 358
Query: 120 ----TLV-----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+L+ +M+ + +PDV+T L F +G + + + +
Sbjct: 359 VTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGE 418
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
++AG +P+I TFN L+ +G G F +M V E ++ + + IVT+N ++ FG+ G
Sbjct: 419 MRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGM 478
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ +F+ M+ P T +L+ AY G ++ +V + + + + D +N
Sbjct: 479 DSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNA 538
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ A R + + + V M+ CKP+++TY +++ AY+ +
Sbjct: 539 VLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANS 581
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 160/323 (49%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK + A + + +G D + ++T+L++AY +G + A + + M+ C+
Sbjct: 191 MLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE-GCK 249
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K + K+ L+ M + G+ P+ TYNTLI R ++ E
Sbjct: 250 PTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQ 309
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M PD T N L +G S + + ++ + +G PSI T+N L+ +Y
Sbjct: 310 VFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYA 369
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G + + + M + + TY ++ F +AG + +F MR+ KP+
Sbjct: 370 RDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNIC 429
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ +G+ G+ ++ V I+ + D V +N L+ +G+ +E+ GV + M
Sbjct: 430 TFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 489
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
++ G P++ T+ T++ AYS G
Sbjct: 490 KRAGFVPERDTFNTLISAYSRCG 512
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 156/325 (48%), Gaps = 2/325 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G +F L+SAY R G F +A ++ + M PD+++Y+ ++ +
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEA-GVTPDLSSYNAVLAAL 543
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + + ++M +PN +TY +L+ AY +K M ++ S EP
Sbjct: 544 ARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVP 603
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E +E+ + G P ++T N ++ YG+ K + ++ +
Sbjct: 604 VLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNF 662
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + +S ++ TYN ++ R+ + ++ E + + + ++ +KP ++ +++ AY G+
Sbjct: 663 MNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGR 722
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ + ++ ++ D + +N V +Y F + GV+ M + GCK ++ TY +
Sbjct: 723 MKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNS 782
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMD 338
+V Y + + A F + ++D
Sbjct: 783 IVDGYCKHSRRADAIMFVSSLNQLD 807
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 145/344 (42%), Gaps = 41/344 (11%)
Query: 44 DKAFSLLEHMKNTPDCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
D A S+ ++ D + +N +++I K ++L+++ G + Y
Sbjct: 161 DMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAY 220
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN--------SGQIDTME 153
+LI AY + + L KM E C+P + T N L +G SG + M+
Sbjct: 221 TSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMK 280
Query: 154 ----------------------------KCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +E+ + +G P TFN LLD YGK+ +
Sbjct: 281 SSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPK 340
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ V++ M+ +S +IVTYN +I A+ R G L++ L M + IKP T +L+
Sbjct: 341 EAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLL 400
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ AG E + + + + FN L+ +G FAEM V E ++ C
Sbjct: 401 SGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCA 460
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
PD VT+ T++ + NGM + E + ++M +R F
Sbjct: 461 PDIVTWNTLLAVFGQNGMDS---EVSGVFKEMKRAGFVPERDTF 501
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 19/284 (6%)
Query: 69 LIKSCLKAFAFDKVQA-LLSDMSTQGIRPNTVTYNTL-IDAYGRAKMFA-----EMELTL 121
LI C + DKV + L + + ++ T+N+L +D G K +M +++
Sbjct: 107 LIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSV 166
Query: 122 VKMLSE--DCEPDVWTMNCTLRA-----FGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ E D E +NC++ A G G++ + G + + L
Sbjct: 167 FSWVREREDFES---VLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSL 223
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSER 233
+ +Y G + V + M++ T++TYN++++ +G+ G ++ L M+S
Sbjct: 224 ITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSG 283
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ P T +L+ E+ V + S D V FN L+D YG+ + E
Sbjct: 284 VAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAM 343
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD-LVEK 336
VL+ M+ G P VTY +++ AY+ +G+ A E +D +VEK
Sbjct: 344 EVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEK 387
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M + + E++ E+ + ++ +G + S+ ++ AY R+G A + +MK T
Sbjct: 681 MHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMK-TYGLV 739
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
PDV TY+ + S F+ ++ M G + N TYN+++D Y
Sbjct: 740 PDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 3/324 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP A ELF + Q + +L+S Y R G ++ LL M++ C+
Sbjct: 100 VLGRANQPGLAQELFD-RAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR-GCR 157
Query: 61 PDVNTYSILIKSCLKAFAFDKV-QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD+ T++I+IK+ + + + +LL D+ G+RP+T+TYNTLI A ++ L
Sbjct: 158 PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAIL 217
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + C+PD+WT N + +G +G+++ + Q G P T+N +L ++
Sbjct: 218 IFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFA 277
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G E++ + M+ S +TYN +I +G+AG ++ E L+ M+ E P V
Sbjct: 278 RDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSV 337
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ G AG + ++ + S + F+ ++ AY + F + + M
Sbjct: 338 TFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCM 397
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGM 323
+ G +PD + Y M+ + GM
Sbjct: 398 LRAGVRPDLLAYSVMLDVFFKAGM 421
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A EL + + G + + + ++S Y + G + A + + M+ C PD T++ LI
Sbjct: 805 AEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEI-GCSPDATTFNTLI 863
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + QALL +M G PN TY TLI AYGR + + + EL + C+
Sbjct: 864 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCK 923
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD N + + +G+ +E+ E+ + G +PS+ T ++L+DSYGK G K V
Sbjct: 924 PDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEV 983
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+E + + S + Y +I++ D R M ++P+ VT+ V A
Sbjct: 984 LETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1040
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + +A E + G + L+++Y R+G+ D+A + M T +
Sbjct: 550 MLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDM-TTEGLE 608
Query: 61 PDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
D + C K FAF + L+ + ++ ++ + +I +YG+ K++ E+
Sbjct: 609 MDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVK-DSAMHVAIIASYGKLKLWQNAEI 667
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + + L A+ +G + + + +AG+QP+ N +L+++G
Sbjct: 668 VFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFG 727
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG +++S + + + S T+ ++ AF R G+L++ ++R M+ PS
Sbjct: 728 RAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQ 787
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ Y +++ I + + LD +N ++ Y +L + V + M
Sbjct: 788 VFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGM 847
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Q+ GC PD T+ T++ YS N M +E Q L+ +M +T
Sbjct: 848 QEIGCSPDATTFNTLIMLYSRNQM---VQEAQALLREMIKT 885
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ + ++ E FQ + + G N+++F + A+ R+G ++A S+ MK P
Sbjct: 726 FGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEA-GFSP 784
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + L+ + + L+ D+ G+ + YN +I Y + + L
Sbjct: 785 SIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVF 844
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M C PD T N + + + + + + G P+I+T+ L+ +YG+
Sbjct: 845 KGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRL 904
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E V + + + YN++I+ + +AG+ +++E + M+ + +PS T+
Sbjct: 905 QAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTI 964
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ +YG G K VL + + D + + +++++ K + L M
Sbjct: 965 HMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTD 1024
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+P VT V A S +HA
Sbjct: 1025 ACVRPTHVTITCFVGAASVCERSSHA 1050
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L Q + G +T ++ L+SA + A + E M+ C PD+ TY+ +I
Sbjct: 180 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQ-GCDPDIWTYNAMI 238
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+A + ++ M QG P+ VTYN+++ A+ R E+E M C
Sbjct: 239 SVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 298
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + +G +G E+ Y + + G P TF +L+D+ GKAG + +A+
Sbjct: 299 SDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAM 358
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M K T+ ++ +I A+ +A E+ + M ++P + ++ +
Sbjct: 359 FEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK 418
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
AG PEK + + + S + + + +V + + AE++ + + M Q
Sbjct: 419 AGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQ 469
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 147/328 (44%), Gaps = 3/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K + A +F+ + G NT +++ALLSAY +G F++A L++M QP+
Sbjct: 657 GKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMV-AAGLQPN 715
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++++ +A ++ + GI PN+ T+ + A+ R E
Sbjct: 716 ATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYR 775
Query: 123 KMLSEDCEPDVWTMNCTLRAFG-NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M P + L + + +ID E+ + + AG++ I+ +N ++ Y K
Sbjct: 776 QMKEAGFSPSIQVFKALLALYSRETVEIDA-EELVKDIKKAGLELDIDIYNHMISLYSKL 834
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + V + MQ+ S T+N +I + R +++ + L R M P+ T
Sbjct: 835 GSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTY 894
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ AYG E V + I + D +N +++ Y + +++ ++E M+
Sbjct: 895 TTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKV 954
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
G +P T ++ +Y G A+E
Sbjct: 955 DGFEPSLTTIHMLMDSYGKGGATGKAEE 982
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEK 158
YN+L+ Y R + ++ L +M C PD+ T N ++A G Q +
Sbjct: 127 VYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQD 186
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+AG++P T+N L+ + + E MQ+ I TYN +I +GRAG
Sbjct: 187 VYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGR 246
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ +FR+M+ + P VT S++ A+ G+ E++ + + ++ D + +N
Sbjct: 247 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 306
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
++ YG+ + + + M++ G PD VT+ ++ G N A F+D+++
Sbjct: 307 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 152/418 (36%), Gaps = 82/418 (19%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM------- 53
M GK KA EL+ M +EG ++ +FT L+ G++G ++A ++ E M
Sbjct: 310 MYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRP 369
Query: 54 ---------------------KNTPDC------QPDVNTYSILIKSCLKAFAFDKVQALL 86
++T C +PD+ YS+++ KA +K L
Sbjct: 370 TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILY 429
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME---------------------------- 118
M G++P Y ++ + + AE+E
Sbjct: 430 KAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQSSASLAALSSTLAKGGFYAE 489
Query: 119 --LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI--NTFNIL 174
+ L ++ V T+N L AF SG++ S I+PS+ + + L
Sbjct: 490 AAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSS--IEPSVAAHLYKRL 547
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
KAG F + M Q Y +++ ++ RAG + F M +E +
Sbjct: 548 AVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGL 607
Query: 235 KPSCVTLCSLVRAYGHAG----KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+ L + V Y G E L L D + D+ ++ +YG+LK +
Sbjct: 608 EMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFD----VKDSAMHVAIIASYGKLKLWQ 663
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ V +QQ G + Y ++ AY+ G F+ +D A +P+
Sbjct: 664 NAEIVFRDLQQHGFAGNTSAYSALLSAYAETG------NFERATRALDNMVAAGLQPN 715
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 2/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M G + + A + + G KA + E MK CQP TY++
Sbjct: 220 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRD-RCQPSTATYTM 278
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + +M +Q +PN T+ L++A+ R + + E ++
Sbjct: 279 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 338
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + A+ +G + + Q G +P ++NI++D+YG+AG E
Sbjct: 339 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 398
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M++ + T+ ++ +++ A+ RAG + + E + M IKP L S++ Y
Sbjct: 399 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 458
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ EK+ VL ++ D +N L++ YGR FA M+ + + R PD
Sbjct: 459 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 518
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
VT+ + + AYS N E F+++++
Sbjct: 519 VTWTSRIGAYSRRKQYNRCLEVFEEMID 546
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + +++ C ++ LL AY SGL +KA ++ M+ P Y+
Sbjct: 185 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY-GFPPSAVVYNA 243
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I +K K + M +P+T TY LI+ YG+A +M S+
Sbjct: 244 YIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 303
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P++ T + AF G + E+ +E+ Q AG++P + +N L+++Y +AG +
Sbjct: 304 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAA 363
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ MQ +YNI++DA+GRAG + + +F +M+ I P+ + L+ AY
Sbjct: 364 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAY 423
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AGK K ++ + S I DT N +++ YGRL F +M+ VL M++ D
Sbjct: 424 SRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADI 483
Query: 309 VTYRTMVRAYSTNG 322
TY ++ Y G
Sbjct: 484 STYNILINIYGRAG 497
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 3/249 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A ++F M + C N +FTAL++A+ R GL +KA + E ++ +
Sbjct: 282 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA-GLE 340
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV Y+ L+++ +A F + + + S M G P+ +YN ++DAYGRA + + +
Sbjct: 341 PDVYAYNALMEAYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 399
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M P + + L A+ +G++ E+ + +GI+P N +L+ YG
Sbjct: 400 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 459
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G FEKM V+ M+K Y I TYNI+I+ +GRAG +ME LFR + + + P V
Sbjct: 460 RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVV 519
Query: 240 TLCSLVRAY 248
T S + AY
Sbjct: 520 TWTSRIGAY 528
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA E+F+ M + C +T ++T L++ YG++ A + M+ + C+P
Sbjct: 248 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR-SQKCKP 306
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++ L+ + + +K + + + G+ P+ YN L++AY RA
Sbjct: 307 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF 366
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + + +E + GI P++ + +LL +Y +A
Sbjct: 367 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 426
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++ M K N +++ +GR G ++ME + M T
Sbjct: 427 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTY 486
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ YG AG ++ + R + +++ D V + + AY R K + V E M
Sbjct: 487 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 546
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
GC PD T + ++ A S NG
Sbjct: 547 AGCYPDGGTAKVLLSACS-NG 566
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ + YN LIDAYG+ ++ + E T +++L C P T L+A+ SG ++ E
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ + + G PS +N +D K G +K + E M++ + TY ++I+ +G+
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 285
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A +F MRS++ KP+ T +LV A+ G EK + + + + D
Sbjct: 286 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 345
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+N L++AY R + +MQ GC+PD+ +Y MV AY G+ A+ ++++
Sbjct: 346 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 405
Query: 336 KMDET 340
++ T
Sbjct: 406 RLGIT 410
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ + + G + + ++ AL+ AY R+G A FSL++HM C+PD +
Sbjct: 325 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM----GCEPDRAS 380
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A + QA+ M GI P ++ L+ AY RA A+ E + +M
Sbjct: 381 YNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMH 440
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD + +N L +G GQ + ME+ + I+T+NIL++ YG+AG F
Sbjct: 441 KSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFA 500
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+M + + + +VT+ I A+ R + +F M P T L+
Sbjct: 501 RMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLL 560
Query: 246 RAYGHAGKPEKLGSVLR 262
A + + +++ +V+R
Sbjct: 561 SACSNGDQIQEVTTVIR 577
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 13/321 (4%)
Query: 30 FTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ L+ AYG+ L+ KA S LE ++ C P +TY++L+K+ + +K +A+ ++
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLE--ARCVPTEDTYALLLKAYCTSGLLEKAEAVFAE 228
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G P+ V YN ID + + +M + C+P T + +G + +
Sbjct: 229 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 288
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
K + + +S +P+I TF L++++ + G EK + E +Q+ + YN
Sbjct: 289 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 348
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++A+ RAG +F LM+ +P + +V AYG AG E +V +
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 408
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I L+ AY R A+ + ++ M + G KPD +M+ Y G
Sbjct: 409 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQ----- 463
Query: 329 EFQDLVEKMDETCLAMKRPDF 349
EKM+E AM++ +
Sbjct: 464 -----FEKMEEVLTAMEKGPY 479
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 162 AGIQPSINTFNILLDSYGK-----------------------------------AGHFEK 186
+ P + +N+L+D+YG+ +G EK
Sbjct: 162 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEK 221
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
AV M+KY + + V YN ID + GD ++ +F M+ +R +PS T L+
Sbjct: 222 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 281
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG A K V + + + F LV+A+ R + + + E +Q+ G +P
Sbjct: 282 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 341
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
D Y ++ AYS G A E L++ M
Sbjct: 342 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 2/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M G + + A + + G KA + E MK CQP TY++
Sbjct: 258 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRD-RCQPSTATYTM 316
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + +M +Q +PN T+ L++A+ R + + E ++
Sbjct: 317 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 376
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + A+ +G + + Q G +P ++NI++D+YG+AG E
Sbjct: 377 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 436
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M++ + T+ ++ +++ A+ RAG + + E + M IKP L S++ Y
Sbjct: 437 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 496
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ EK+ VL ++ D +N L++ YGR FA M+ + + R PD
Sbjct: 497 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 556
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
VT+ + + AYS N E F+++++
Sbjct: 557 VTWTSRIGAYSRRKQYNRCLEVFEEMID 584
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + +++ C ++ LL AY SGL +KA ++ M+ P Y+
Sbjct: 223 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY-GFPPSAVVYNA 281
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I +K K + M +P+T TY LI+ YG+A +M S+
Sbjct: 282 YIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 341
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P++ T + AF G + E+ +E+ Q AG++P + +N L+++Y +AG +
Sbjct: 342 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAA 401
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ MQ +YNI++DA+GRAG + + +F +M+ I P+ + L+ AY
Sbjct: 402 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAY 461
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AGK K ++ + S I DT N +++ YGRL F +M+ VL M++ D
Sbjct: 462 SRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADI 521
Query: 309 VTYRTMVRAYSTNG 322
TY ++ Y G
Sbjct: 522 STYNILINIYGRAG 535
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 3/249 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A ++F M + C N +FTAL++A+ R GL +KA + E ++ +
Sbjct: 320 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA-GLE 378
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV Y+ L+++ +A F + + + S M G P+ +YN ++DAYGRA + + +
Sbjct: 379 PDVYAYNALMEAYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 437
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M P + + L A+ +G++ E+ + +GI+P N +L+ YG
Sbjct: 438 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 497
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G FEKM V+ M+K Y I TYNI+I+ +GRAG +ME LFR + + + P V
Sbjct: 498 RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVV 557
Query: 240 TLCSLVRAY 248
T S + AY
Sbjct: 558 TWTSRIGAY 566
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA E+F+ M + C +T ++T L++ YG++ A + M+ + C+P
Sbjct: 286 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR-SQKCKP 344
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++ L+ + + +K + + + G+ P+ YN L++AY RA
Sbjct: 345 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF 404
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + + +E + GI P++ + +LL +Y +A
Sbjct: 405 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 464
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++ M K N +++ +GR G ++ME + M T
Sbjct: 465 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTY 524
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ YG AG ++ + R + +++ D V + + AY R K + V E M
Sbjct: 525 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 584
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
GC PD T + ++ A S NG
Sbjct: 585 AGCYPDGGTAKVLLSACS-NG 604
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ + YN LIDAYG+ ++ + E T +++L C P T L+A+ SG ++ E
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 263
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ + + G PS +N +D K G +K + E M++ + TY ++I+ +G+
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 323
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A +F MRS++ KP+ T +LV A+ G EK + + + + D
Sbjct: 324 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 383
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+N L++AY R + +MQ GC+PD+ +Y MV AY G+ A+ ++++
Sbjct: 384 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 443
Query: 336 KMDET 340
++ T
Sbjct: 444 RLGIT 448
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ + + G + + ++ AL+ AY R+G A FSL++HM C+PD +
Sbjct: 363 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM----GCEPDRAS 418
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A + QA+ M GI P ++ L+ AY RA A+ E + +M
Sbjct: 419 YNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMH 478
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD + +N L +G GQ + ME+ + I+T+NIL++ YG+AG F
Sbjct: 479 KSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFA 538
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+M + + + +VT+ I A+ R + +F M P T L+
Sbjct: 539 RMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLL 598
Query: 246 RAYGHAGKPEKLGSVLR 262
A + + +++ +V+R
Sbjct: 599 SACSNGDQIQEVTTVIR 615
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 13/321 (4%)
Query: 30 FTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ L+ AYG+ L+ KA S LE ++ C P +TY++L+K+ + +K +A+ ++
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLE--ARCVPTEDTYALLLKAYCTSGLLEKAEAVFAE 266
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G P+ V YN ID + + +M + C+P T + +G + +
Sbjct: 267 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 326
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
K + + +S +P+I TF L++++ + G EK + E +Q+ + YN
Sbjct: 327 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 386
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++A+ RAG +F LM+ +P + +V AYG AG E +V +
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 446
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I L+ AY R A+ + ++ M + G KPD +M+ Y G
Sbjct: 447 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQ----- 501
Query: 329 EFQDLVEKMDETCLAMKRPDF 349
EKM+E AM++ +
Sbjct: 502 -----FEKMEEVLTAMEKGPY 517
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 162 AGIQPSINTFNILLDSYGK-----------------------------------AGHFEK 186
+ P + +N+L+D+YG+ +G EK
Sbjct: 200 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEK 259
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
AV M+KY + + V YN ID + GD ++ +F M+ +R +PS T L+
Sbjct: 260 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 319
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG A K V + + + F LV+A+ R + + + E +Q+ G +P
Sbjct: 320 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 379
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
D Y ++ AYS G A E L++ M
Sbjct: 380 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 2/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M G + + A + + G KA + E MK CQP TY++
Sbjct: 150 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRD-RCQPSTATYTM 208
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + +M +Q +PN T+ L++A+ R + + E ++
Sbjct: 209 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 268
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + A+ +G + + Q G +P ++NI++D+YG+AG E
Sbjct: 269 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 328
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M++ + T+ ++ +++ A+ RAG + + E + M IKP L S++ Y
Sbjct: 329 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 388
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ EK+ VL ++ D +N L++ YGR FA M+ + + R PD
Sbjct: 389 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 448
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
VT+ + + AYS N E F+++++
Sbjct: 449 VTWTSRIGAYSRRKQYNRCLEVFEEMID 476
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 15/329 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + +++ C ++ LL AY SGL +KA ++ M+ P Y+
Sbjct: 115 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY-GFPPSAVVYNA 173
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTL 121
I +K K + M +P+T TY LI+ YG+A K+F EM
Sbjct: 174 YIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR--- 230
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
S+ C+P++ T + AF G + E+ +E+ Q AG++P + +N L+++Y +A
Sbjct: 231 ----SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRA 286
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + MQ +YNI++DA+GRAG + + +F +M+ I P+ +
Sbjct: 287 GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSH 346
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ AY AGK K ++ + S I DT N +++ YGRL F +M+ VL M++
Sbjct: 347 MLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEK 406
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D TY ++ Y G +E
Sbjct: 407 GPYPADISTYNILINIYGRAGFFARMEEL 435
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 3/249 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A ++F M + C N +FTAL++A+ R GL +KA + E ++ +
Sbjct: 212 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA-GLE 270
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV Y+ L+++ +A F + + + S M G P+ +YN ++DAYGRA + + +
Sbjct: 271 PDVYAYNALMEAYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 329
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M P + + L A+ +G++ E+ + +GI+P N +L+ YG
Sbjct: 330 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 389
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G FEKM V+ M+K Y I TYNI+I+ +GRAG +ME LFR + + + P V
Sbjct: 390 RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVV 449
Query: 240 TLCSLVRAY 248
T S + AY
Sbjct: 450 TWTSRIGAY 458
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 1/314 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA E+F+ M + C +T ++T L++ YG++ A + M++ C+P
Sbjct: 178 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ-KCKP 236
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++ L+ + + +K + + + G+ P+ YN L++AY RA
Sbjct: 237 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF 296
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + + +E + GI P++ + +LL +Y +A
Sbjct: 297 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 356
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++ M K N +++ +GR G ++ME + M T
Sbjct: 357 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTY 416
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ YG AG ++ + R + +++ D V + + AY R K + V E M
Sbjct: 417 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 476
Query: 302 RGCKPDKVTYRTMV 315
GC PD T + ++
Sbjct: 477 AGCYPDGGTAKNVL 490
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
P+ + YN LIDAYG+ ++ + E T +++L C P T L+A+ SG ++ E
Sbjct: 95 HPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEA 154
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + + G PS +N +D K G +K + E M++ + TY ++I+ +G
Sbjct: 155 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 214
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +F MRS++ KP+ T +LV A+ G EK + + + + D
Sbjct: 215 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVY 274
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+N L++AY R + +MQ GC+PD+ +Y MV AY G+ A+ +++
Sbjct: 275 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM 334
Query: 335 EKMDET 340
+++ T
Sbjct: 335 KRLGIT 340
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 30 FTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ L+ AYG+ L+ KA S LE ++ C P +TY++L+K+ + +K +A+ ++
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEAR--CVPTEDTYALLLKAYCTSGLLEKAEAVFAE 158
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G P+ V YN ID + + +M + C+P T + +G + +
Sbjct: 159 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 218
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
K + + +S +P+I TF L++++ + G EK + E +Q+ + YN
Sbjct: 219 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 278
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++A+ RAG +F LM+ +P + +V AYG AG E +V +
Sbjct: 279 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 338
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I L+ AY R A+ + ++ M + G KPD +M+ Y G
Sbjct: 339 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQ----- 393
Query: 329 EFQDLVEKMDETCLAMKR 346
EKM+E AM++
Sbjct: 394 -----FEKMEEVLTAMEK 406
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 7/328 (2%)
Query: 2 LGKCKQPEKAHELFQAM--VDEGCD----ANTQSFTALLSAYGRSGLFDKAFSLLEHMKN 55
L K +A ELF + +D+ D NT ++T ++S G +A L+ M++
Sbjct: 164 LNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRS 223
Query: 56 TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
Q +V+TYS L+ C+K D + M +G PN VTYNTLID YG+ +
Sbjct: 224 R-GIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWE 282
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
E L + + +P++ T N + A SGQ + YE+ +AG QP+ T+ L+
Sbjct: 283 EAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALI 342
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+YGK G ++ + + M + ++TY+ +I A +AG + LFR M +E +
Sbjct: 343 SAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCR 402
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT SL+ A + EK + + + D V F L+ AY R +
Sbjct: 403 PNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTA 462
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
E M+ C+PD V Y T+V A G+
Sbjct: 463 FEQMKAHNCRPDSVVYNTIVGALWKTGL 490
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q ++A ++FQ MV GC+ N ++++L+SA ++G ++ A L M +T C+P+
Sbjct: 346 GKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREM-HTEGCRPN 404
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +C + ++K Q + M +G +P+ VT+ LI AY RA +
Sbjct: 405 VVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFE 464
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+M + +C PD N + A +G +
Sbjct: 465 QMKAHNCRPDSVVYNTIVGALWKTGLV 491
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 46/313 (14%)
Query: 26 NTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT--YSILIKSCLKAFAFD 80
++ + ALL +SG +A F L + ++ D P NT Y+ +I C
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ L+++M ++GI+ N TY+ L MN +
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSAL-------------------------------MNVCI 241
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ GN ++D Y + + G P++ T+N L+D YGK G +E+ V++ +++
Sbjct: 242 K--GN--ELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGID 297
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
I TYN VI A +G ++ ++ M + +P+ T +L+ AYG G+ ++ +
Sbjct: 298 PEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQI 357
Query: 261 LRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + + + ++ L+ A GR + E+ M GC+P+ VTY +++ A
Sbjct: 358 FQDMVRRGCERNVITYSSLISACEKAGRWELALEL---FREMHTEGCRPNVVTYNSLIAA 414
Query: 318 YSTNGMKNHAKEF 330
+ A+E
Sbjct: 415 CAQGAQWEKAQEM 427
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 7/212 (3%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQ----SAGIQPSINT--FNILLDSYGKAGHFE 185
D + L+ SG + ++ ++ + S + P NT + ++ G
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ ++ M+ + TY+ +++ + +L ++R M +E P+ VT +L+
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLI 272
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
YG G E+ VL ++ I + +N ++ A E + E M G +
Sbjct: 273 DVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQ 332
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
P TY ++ AY NG + A + FQD+V +
Sbjct: 333 PTATTYTALISAYGKNGQLDRALQIFQDMVRR 364
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 1/339 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C++ ++A++L M+ + C + + L++ + G D A ++L+ M C P
Sbjct: 102 LCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER-SCVP 160
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ LI C + A D+ + L+ M G+ P+TV YN L++ + E+ L
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ EPD ++ N + SG+ + K EK P + T+N L+D + K
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++E M + T++TY +I F RA L + M I P VT
Sbjct: 281 SKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY 340
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ AGK E+ +L + D D V ++ LV+ +L + + +LE+M +
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
RGC+P+ VT+ TM+ + G + + +L++++ T
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A + + M++ C + ++T+L+ ++ D+A L+E MK +
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES-GLT 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+ L+ K ++V LL +M G P+T +YNT++ + + E
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM+ + C PDV T N + F ++D E+ E P++ T+ L+ + +
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A VME M K S +VTYN ++D +AG L++ L +M + P VT
Sbjct: 315 ADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT 374
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV GK + +L + + V FN ++D + + E VLE+M+
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ C PD VTY T++ Y
Sbjct: 435 EVSCTPDVVTYSTLIDGY 452
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 153/328 (46%), Gaps = 7/328 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L + M + G +T ++ ALL+ + ++ LLE M +PD +Y+
Sbjct: 179 DEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNT 237
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ ++ +++ +L M + P+ VTYN+L+D + + E E L M+
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P V T + F + ++ + E AGI P + T+N LLD KAG E+
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M + + +VTY+I+++ + G + L +M +P+ VT +++ +
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AGK ++ VL + D V ++ L+D Y + + +L G PDK
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDK 471
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+Y +M+ + G A+E DL+ K
Sbjct: 472 ASYSSMLEGLCSTGKVEEAQEVMDLMTK 499
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ E+ +L + MV+ G + +T S+ +++ SG +++A +LE M C
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK-KCG 264
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ L+ K D+ + LL DM + P +TY TLI + RA A+
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M PD+ T NC L +G+++ + E P + T++IL++ K
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + ++E M + +VT+N +ID F +AG + + + LM+ P VT
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ Y A + + ++L I D ++ +++ E + V+++M
Sbjct: 445 YSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498
Query: 301 QRGCKPDKVTYRTMV 315
++GC P Y ++
Sbjct: 499 KQGCPPTSSHYALII 513
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 138/324 (42%), Gaps = 7/324 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+ + + M G + ++ LL ++G ++A LLE M DC PDV TYSIL+
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK-DCAPDVVTYSILV 379
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D + LL M +G +PN VT+NT+ID + +A E L M C
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T + + + + ++ + F GI P +++ +L+ G E+ V
Sbjct: 440 PDVVTYSTLIDGYCKANRMQ------DAFAILGISPDKASYSSMLEGLCSTGKVEEAQEV 493
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ M K T Y ++I + + ++M +P+ T L+
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCK 553
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ E +VL + + D + L+D + ++ + M+ GC+PDK+
Sbjct: 554 TKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLA 613
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLV 334
Y ++ + +G A E L+
Sbjct: 614 YNILISGFCQSGNVEKAIEVMQLM 637
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 132/335 (39%), Gaps = 38/335 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ +L AY + G D+A S H + C P TY ILI + D+ LL +
Sbjct: 61 THNTILKAYCQIGDLDRALS---HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDE 117
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + P+ YN LI + L ML C PDV T + +
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-------------- 194
+D K EK + +G+ P +N LL+ K E++S ++E M
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 195 --------QKYHYSWTI-------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
KY + I VTYN ++D F + + + E L M R
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ +T +L+ + A + V+ + + I D V +NCL+D + E
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+LEVM ++ C PD VTY +V G + A+
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 44/320 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A L + M++ GC N +F ++ + ++G D+ +LE MK C
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV-SCT 439
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LI KA A+L GI P+ +Y+++++ E +
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEV 493
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M + C P + + + D K + G +P++ T++IL++ K
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCK 553
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E V++ M + + TY +ID F + + F+ MR +P
Sbjct: 554 TKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEP---- 609
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
D + +N L+ + + + V+++M
Sbjct: 610 -------------------------------DKLAYNILISGFCQSGNVEKAIEVMQLML 638
Query: 301 QRGCKPDKVTYRTMVRAYST 320
++GC PD TY +++R+ +T
Sbjct: 639 EKGCNPDAATYFSLMRSLTT 658
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
E+F +PS +T+ L+ + +AG+ + + + M +S ++T+N ++ A+ +
Sbjct: 14 ERFSDPS-KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
GDL + FR P+ T C L+ + ++ +L + D D +
Sbjct: 73 GDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
NCL+ ++ + VL++M +R C PD +TY +++ N E + L+EK
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT---NALDEARKLMEK 187
Query: 337 MDETCLAMKRPD 348
M E+ L PD
Sbjct: 188 MKESGLT---PD 196
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 159/319 (49%), Gaps = 3/319 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ QP A ELF + Q + +L+S Y R G ++ LL M++ C+
Sbjct: 89 VLGRANQPGLAQELFD-RAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR-GCR 146
Query: 61 PDVNTYSILIKSCLKAFAFDKV-QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD+ T++I+IK+ + + + +LL D+ G+RP+T+TYNTLI A ++ L
Sbjct: 147 PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAIL 206
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + C+PD+WT N + +G +G+++ + Q G P T+N +L ++
Sbjct: 207 IFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFA 266
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G E++ + M+ S +TYN +I +G+AG ++ E L+ M+ E P V
Sbjct: 267 RDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSV 326
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ G AG + ++ + S + F+ ++ AY + F++ + M
Sbjct: 327 TFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCM 386
Query: 300 QQRGCKPDKVTYRTMVRAY 318
+ G +PD + Y M+ +
Sbjct: 387 LRAGVRPDLLAYSVMLDVF 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A EL + + G + + + ++S Y + G + KA + + M+ C PD T++ LI
Sbjct: 794 AEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEI-GCSPDATTFNTLI 852
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + QALL +M G PN TY TLI AYGR + + + EL + C+
Sbjct: 853 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCK 912
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD N + + +G+ +E+ E+ ++ G +PS+ T ++L+DSYGK G K V
Sbjct: 913 PDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEV 972
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+E + + S + Y +I++ D R M ++P+ VT+ V A
Sbjct: 973 LETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1029
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 156/341 (45%), Gaps = 6/341 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + +A E + G + L+++Y R+G+ D+A + M T +
Sbjct: 539 MLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDM-TTEGLE 597
Query: 61 PDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
D + C K FAF + L+ + ++ ++ + +I +YG+ K++ E+
Sbjct: 598 MDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVK-DSAMHVAIIASYGKLKLWQNAEI 656
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + + L A+ +G + + + +AG+QP+ N +L+++G
Sbjct: 657 VFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFG 716
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG +++S + + + + T+ ++ AF R G+L++ ++R MR PS
Sbjct: 717 RAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQ 776
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ Y +++ I + + LD +N ++ Y +L + + V + M
Sbjct: 777 VFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGM 836
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Q+ GC PD T+ T++ YS N M +E Q L+ +M +T
Sbjct: 837 QEIGCSPDATTFNTLIMLYSRNQM---VQEAQALLREMIKT 874
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 141/326 (43%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ + ++ E +Q + + G N+++F + A+ R+G ++A S+ M+ P
Sbjct: 715 FGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREA-GFSP 773
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + L+ + + L+ D+ G+ + YN +I Y + + + L
Sbjct: 774 SIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVF 833
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M C PD T N + + + + + + G P+I+T+ L+ +YG+
Sbjct: 834 KGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRL 893
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E V + + + YN++I+ + +AG+ +++E + M+++ +PS T+
Sbjct: 894 QAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTI 953
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ +YG G K VL + + D + + +++++ K + L M
Sbjct: 954 HMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTD 1013
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+P VT V A S +HA
Sbjct: 1014 ACVRPTHVTITCFVGAASVCERSSHA 1039
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 148/328 (45%), Gaps = 3/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K + A +F+ + G NT +++ALLSAY +G F++A L++M QP+
Sbjct: 646 GKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMV-AAGLQPN 704
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++++ +A ++ + GI PN+ T+ + A+ R E
Sbjct: 705 AACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYR 764
Query: 123 KMLSEDCEPDVWTMNCTLRAFG-NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M P + L + + +ID E+ + + AG++ ++ +N ++ Y K
Sbjct: 765 QMREAGFSPSIQVFKALLALYSRETVEIDA-EELVKDIKKAGLELDMDIYNHMISLYSKL 823
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + K + V + MQ+ S T+N +I + R +++ + L R M P+ T
Sbjct: 824 GSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTY 883
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ AYG E V + I + D +N +++ Y + +++ V+E M+
Sbjct: 884 TTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKA 943
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
G +P T ++ +Y G A+E
Sbjct: 944 DGFEPSLTTIHMLMDSYGKGGATGKAEE 971
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 1/291 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L Q + G +T ++ L+SA + A + E M+ C PD+ TY+ +I
Sbjct: 169 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQ-GCDPDIWTYNAMI 227
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+A + ++ M QG P+ VTYN+++ A+ R E+E M C
Sbjct: 228 SVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 287
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + +G +G E+ Y + + G P TF +L+D+ GKAG + +A+
Sbjct: 288 SDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAM 347
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M K T+ ++ +I A+ +A E+ + M ++P + ++ +
Sbjct: 348 FEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK 407
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
A PEK + + + S + + + +V + + AE++ + + M Q
Sbjct: 408 AEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQ 458
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEK 158
YN+L+ Y R + ++ L +M C PD+ T N ++A G Q +
Sbjct: 116 VYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQD 175
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+AG++P T+N L+ + + E MQ+ I TYN +I +GRAG
Sbjct: 176 VYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGR 235
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ +FR+M+ + P VT S++ A+ G+ E++ + + ++ D + +N
Sbjct: 236 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 295
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
++ YG+ + + + M++ G PD VT+ ++ G N A F+D+++
Sbjct: 296 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 353
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 146/382 (38%), Gaps = 47/382 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD 58
LGK +A +F+ M+ Q+F+A++ AY ++ +F A EH +
Sbjct: 335 LGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDA----EHTYSCMLRAG 390
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD+ YS+++ KA +K L M G++P Y ++ + + AE+E
Sbjct: 391 VRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIE 450
Query: 119 ------------------------------LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ L ++ V T+N L AF SG+
Sbjct: 451 NLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGK 510
Query: 149 IDTMEKCYEKFQSAGIQPSI--NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ S I+PS+ + + L KAG F + M Q Y +
Sbjct: 511 LSDARDLVHAVSS--IEPSVAAHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFL 568
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++ ++ RAG + F M +E ++ L + V Y G +L +
Sbjct: 569 KVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLH 628
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + D+ ++ +YG+LK + + V +Q+ G + Y ++ AY+ G
Sbjct: 629 AFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETG---- 684
Query: 327 AKEFQDLVEKMDETCLAMKRPD 348
F+ +D A +P+
Sbjct: 685 --NFERATRALDNMVAAGLQPN 704
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS-VL 261
+ YN ++ + R GD ++ L M+ +P VT +++A G E L S +L
Sbjct: 114 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 173
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + + DT+ +N L+ A ++ + E MQ++GC PD TY M+ Y
Sbjct: 174 QDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRA 233
Query: 322 G 322
G
Sbjct: 234 G 234
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 166/332 (50%), Gaps = 4/332 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+AH++ Q M+ GC + +++ ++S + ++G +A LLE M C+PDV S
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR-GCRPDVACLST 445
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + KA A D Q LL P+ V Y+ LI A +AK E E L M+
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T N + S +I+ +++ ++AG+ P + T++I++ S+ K + +
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M++ +VTY+ +I+ +AG + + +F+ M P+ VT +L+
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
K E+ +L + D++ + CL++ E VL M+ +GC PD+
Sbjct: 626 CKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDR 685
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+TY T++RA N+ + + L+++M+ T
Sbjct: 686 MTYGTLLRALQKT---NNLELVEQLLKEMEAT 714
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 168/341 (49%), Gaps = 8/341 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K + E+A +L +M+ +GC N S+ +++ ++ + LLE M + +C
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN-NCV 1155
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T++ +I + K + D L + + G PN VTYN+L+ +++ F + E
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + C PD+ T N + S ++D K + + S G+ P T++I++ S
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++ + V+E M K + +TY +ID F + G+L + + +L+ S+ P V
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + G+ + G +L + + ++ DTV +N L+ + + + EVM
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+Q GC+PD TY T+V G K ++DL+ ++ ++
Sbjct: 1396 RQCGCEPDNATYTTLV------GHLVDKKSYKDLLAEVSKS 1430
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+EL + M G N ++ + D A L + M+ + C PDV TYS ++
Sbjct: 896 AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S +K+ D L+ DM ++G PN VTY++L+ +A E L +M C
Sbjct: 956 DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + G+ID E+ G QP++ T+ +LLD++ K G E +
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M + Y + TYN ++D F + ++++ L M + P+ V+ +++
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A K + +L + +++ + D V FN ++DA + + ++Q+ GC P+ VT
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195
Query: 311 YRTMVRA 317
Y ++V
Sbjct: 1196 YNSLVHG 1202
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 3/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
L ++ + A ELF+ M + G C + +++ ++ + +SG D A L+E M + C
Sbjct: 922 LCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV-SKGCS 980
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TYS L+ KA D+ ALL M+ G PN VTYNT+ID + + E
Sbjct: 981 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 1040
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ C+P+V T L AF G+ + E G P++ T+N LLD + K
Sbjct: 1041 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 1100
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E+ ++ M + +V+YN VI +A + + L M S P VT
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVM 299
+++ A + + + I S + V +N LV + + F + + +L E+
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 300 QQRGCKPDKVTYRTMV 315
+++GC PD +TY T++
Sbjct: 1221 RKQGCSPDIITYNTVI 1236
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 150/369 (40%), Gaps = 33/369 (8%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN----- 55
+L K Q +AH+LF++ ++ +T +++ L+S + R+G A+ L + M
Sbjct: 135 VLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKA 194
Query: 56 ----------------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+ C PD TY+ +I K+ D LL
Sbjct: 195 HAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLE 254
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M G PN +YNT++ + +A L +M++ C PDV + +
Sbjct: 255 EMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLD 314
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q+D + +K G QP++ T+ L+D + + G + ++ M + Y +TYN
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F R D+++ + ++M P + +++ + AGK + +L +
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
D + L+DA + + +L + C PD V Y ++ A A
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494
Query: 328 KEFQDLVEK 336
+ + D++ K
Sbjct: 495 ESWLDVMVK 503
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA 76
A EG + +T + LL A R + L+ +N C P++ T++ILI +A
Sbjct: 834 ATSQEGYNHDTYTCNCLLQALLR---LKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRA 890
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE--DCEPDVW 134
LL +M G+ N + +N +I A+ + L L K + E C PDV+
Sbjct: 891 GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKL-DSALELFKEMEESGSCPPDVF 949
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + + SG++D + E S G P++ T++ LL KAG ++ +A+++ M
Sbjct: 950 TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 1009
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ S IVTYN +ID + G + + +L M +P+ VT L+ A+ GK
Sbjct: 1010 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 1069
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E ++ + + + +N L+D + + +L M Q+GC P+ V+Y T+
Sbjct: 1070 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 1129
Query: 315 V 315
+
Sbjct: 1130 I 1130
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+ELF + + GC N ++ +L+ +S FD+A LL M C PD+ TY+ +I
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ D+ L M + G+ P+ VTY+ +I + + + E L ML +
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 1296
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P T + F +G +D + + S G P + TF+I +D K G + +
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M + VTYN ++ F A + LF +MR +P T +LV GH
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV---GH 1413
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVF---------------------FNC-LVDAYGRLKC 288
+ +L + S M+DT F C +VD +G+
Sbjct: 1414 LVDKKSYKDLLAEVSKS--MVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGS 1471
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + V E M QR + V + M+ Y
Sbjct: 1472 PQDARKVFEGMDQR----NVVLWSAMLGVY 1497
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 144/336 (42%), Gaps = 3/336 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q ++A + M+ GC N ++ L+ + R G D A L+ M +
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-GYR 367
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + ++ +L M G P+ + Y+T+I + +A E
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ C PDV ++ + A + ID+ ++ P + ++IL+ + K
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + ++ M K +VTYN V+D ++ + LF MR+ + P VT
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVT 547
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ ++ + +L + + + D V ++ L++ + + V + M
Sbjct: 548 YSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
GC P+ VTY T++ A E +++ K
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRK 643
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 3/268 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L K + A EL + + C + +++ L+ A ++ +A S L+ M KN C
Sbjct: 450 LCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR--CY 507
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ ++ K+ + L M G+ P+ VTY+ +I ++ +
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PDV T + + +G +D +++ G P++ T+N L+D K
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E+ + ++E M+K + +TY +I+ A L++ + R M+ + P +T
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+L+RA E + +L+ ++ ++
Sbjct: 688 YGTLLRALQKTNNLELVEQLLKEMEATE 715
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 30/334 (8%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A+ + + M+ G D ++ L+ + ++G DKA +L+ + + PDV T+SI
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS-YPDVVTFSI 1339
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I K + LL M G+ P+TVTYNTL+ + A + + M
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399
Query: 129 CEPDVWTMNCT------------LRAFGNSGQIDTMEKCYEKFQSA-----GIQPSINTF 171
CEPD T L A + +DT K + S ++ +
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLG 1459
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
++D +GK G + V E M + + +V ++ ++ + +Q L+R+M
Sbjct: 1460 CAIVDMFGKCGSPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEEQAFGLWRVMGL 1515
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS-DIMLD--TVFFNCLVDAYGRLKC 288
E ++P VT SL+ HAG + +V F+ S D L+ F+C++D GRL
Sbjct: 1516 EGVEPDAVTFLSLLTMCCHAGLLD--AAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGL 1573
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
E + ++M CKP T+ ++ AY G
Sbjct: 1574 VNEAE---DLMLGMPCKPSAATWNCLLSAYKICG 1604
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S +G +T T N L+ A R K + L C P+++T + +G I
Sbjct: 836 SQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDI 893
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT----IVT 205
T + ++ G+ ++ N+++ A K+ + +E ++ S + + T
Sbjct: 894 GTAYELLKEMPRHGVPQNVILHNVVIKGLCSA---RKLDSALELFKEMEESGSCPPDVFT 950
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ ++D+ ++G + L M S+ P+ VT SL+ AGK ++ ++L+ +
Sbjct: 951 YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
S + V +N ++D + +L E +LE M GC+P+ VTY ++ A+ G
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG--- 1067
Query: 326 HAKEFQDLVEKMDE 339
A++ LVE M E
Sbjct: 1068 KAEDAIGLVEVMVE 1081
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 15/181 (8%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GKC P+ A ++F+ M N ++A+L Y ++AF L M +
Sbjct: 1465 MFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVM-GLEGVE 1519
Query: 61 PDVNTYSILIKSCLKAFAFD-KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD T+ L+ C A D V +S G+ P ++ +ID GR + E E
Sbjct: 1520 PDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAED 1579
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
ML C+P T NC L A+ G + + A + P+ ++ +L + Y
Sbjct: 1580 L---MLGMPCKPSAATWNCLLSAYKICGDFE------RALRVAELNPTQASYLLLSNMYA 1630
Query: 180 K 180
+
Sbjct: 1631 Q 1631
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G Q I N LL+ KA + + + + + VTY+ +I F RAG +
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM-LDTVFFNCLVD 281
LF M + +K S++R AG+ +VL F + S D+V +N +++
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSD--AVLHFREMSKTCPPDSVTYNTMIN 238
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
+ + +LE M G P+ +Y T++ + N ++N + +V +
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 6/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+LGK Q A E+F M E NT Q + A++ Y R G F+K LL+ M+ C
Sbjct: 229 VLGKANQEALAVEVF--MRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRER-GC 285
Query: 60 QPDVNTYSILIKSCLKAFAF--DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+PD+ +++ LI + LKA A + LL+++ G+RP+T+TYNTLI A RA E
Sbjct: 286 KPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEA 345
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
M + C+PD+WT N + +G G E+ + +S G P ++N LL +
Sbjct: 346 AKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYA 405
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ + G+ EK+ + E M K + +TYN +I +G+ G + L+R M+S P
Sbjct: 406 FAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPD 465
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT L+ + G K + V+ + N+ + ++ L+ Y + E + +
Sbjct: 466 AVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFD 525
Query: 298 VMQQRGCKPDKVTYRTMV 315
M + G +PD + Y M+
Sbjct: 526 CMLRSGIRPDHLAYSVML 543
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 6/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDCQPDVNTYS 67
K EL M + GC + SF L++A ++G + + A LL ++ + +PD TY+
Sbjct: 272 KVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRS-GLRPDTITYN 330
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C +A ++ + DM +P+ TYN +I YGR + + E + S
Sbjct: 331 TLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESR 390
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD + N L AF G ++ +++ +E+ G T+N ++ YGK G E
Sbjct: 391 GFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELA 450
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ MQ + VTY ++ID+ G+ + + + M + +KP+ T +L+
Sbjct: 451 LQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICG 510
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGKP + + S I D + ++ ++D + R + + M G D
Sbjct: 511 YAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLD 570
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+R T N ++ ++ M+E C
Sbjct: 571 HSLYELMLR---TLRKVNKVEDIGRVIRDMEEIC 601
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 152/325 (46%), Gaps = 4/325 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPDVNT 65
PE AH L +G N S + ++ AYGR L+ KA S+ +++ C D
Sbjct: 758 PETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQR--CITVDRKV 815
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ LI++ + +++ +A+ + M G P T N L+ A E+ + + ++
Sbjct: 816 WNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQ 875
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ ++ L AF +G I ++K Y ++AG P+++ + ++ +
Sbjct: 876 DMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVR 935
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ A++ M++ + + +N V+ + D ++ +++ ++ + ++P T +L+
Sbjct: 936 DVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLI 995
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y +PE+ S++ + + + + LV ++G+ + + + + E +Q +GCK
Sbjct: 996 VMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCK 1055
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
D+ Y TM++ Y +G + A+
Sbjct: 1056 LDRSFYHTMMKIYRNSGSHSKAERL 1080
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + KQ + M + G + + ++L Y F K + + +K +
Sbjct: 927 LLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKED-GLE 985
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +TY+ LI + ++ +L+ +M G+ P TY +L+ ++G+ ++ + E
Sbjct: 986 PDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEEL 1045
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ S+ C+ D + ++ + NSG E+ + + AG++P+I T ++L+ SYG
Sbjct: 1046 FEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGS 1105
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G ++ V+ +++ + + + Y+ VIDA+ R GD M+ E ++P
Sbjct: 1106 SGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRI 1165
Query: 241 LCSLVRA 247
+RA
Sbjct: 1166 WTCFIRA 1172
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 146/350 (41%), Gaps = 44/350 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F M+ +G + LL A G D+ + +++ ++ D ++ SI
Sbjct: 830 ERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQ---DMGFKISKSSI 886
Query: 69 LIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ L AFA +V+ + M G P Y + R K ++E L +M
Sbjct: 887 LL--MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEM 944
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+PD+ N L+ + + Y++ + G++P +T+N L+ Y +
Sbjct: 945 EEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRP 1004
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR----------------------------- 215
E+ ++M M+ + TY ++ +FG+
Sbjct: 1005 EEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTM 1064
Query: 216 ------AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+G + E LF +M+ ++P+ T+ L+ +YG +G+P++ VL + +
Sbjct: 1065 MKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGS 1124
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L T+ ++ ++DAY R + L M++ G +PD + +RA S
Sbjct: 1125 NLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAAS 1174
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 147/328 (44%), Gaps = 1/328 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F M G A+ + +++ Y + G + A L++ ++ +++ Y +
Sbjct: 725 EASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNV 784
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I++ + + K +++ ++ + I + +N LI+AY + + M+ +
Sbjct: 785 IEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGP 844
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V T+N L+A G++D + ++ Q G + S ++ ++LD++ +AG+ ++
Sbjct: 845 SPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKK 904
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M+ Y T+ Y ++ R ++ +E + M KP S+++ Y
Sbjct: 905 IYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYV 964
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
K V + I + D +N L+ Y R E ++ M+ G +P
Sbjct: 965 AIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLD 1024
Query: 310 TYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY+++V ++ + A+E F++L K
Sbjct: 1025 TYKSLVASFGKQQLVEQAEELFEELQSK 1052
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 144/328 (43%), Gaps = 3/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQP 61
G+ K +KA + + + + + AL+ AY SG +++A ++ M ++ P P
Sbjct: 789 GRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPS--P 846
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+T + L+++ + D++ ++ ++ G + + + ++DA+ RA E++
Sbjct: 847 TVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIY 906
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + P + R Q+ +E + + AG +P ++ +N +L Y
Sbjct: 907 HGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAI 966
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F K V + +++ TYN +I + R ++ L MR ++P T
Sbjct: 967 EDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTY 1026
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SLV ++G E+ + + + LD F++ ++ Y ++ + + +M+
Sbjct: 1027 KSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKD 1086
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
G +P T ++ +Y ++G A++
Sbjct: 1087 AGVEPTIATMHLLMVSYGSSGQPQEAEK 1114
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E+A ELF+ + +GC + + ++ Y SG KA L MK+ +P
Sbjct: 1033 FGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDA-GVEP 1091
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T +L+ S + + + +LS++ G +T+ Y+++IDAY R + L
Sbjct: 1092 TIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKL 1151
Query: 122 VKMLSEDCEPD--VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
++M E EPD +WT C +RA S + Q AG I
Sbjct: 1152 IQMKKEGLEPDHRIWT--CFIRAASLSRRTSEAIVLLNALQDAGFDLPI 1198
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/389 (17%), Positives = 157/389 (40%), Gaps = 78/389 (20%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDCQP 61
G+C A ++ + + + + + ++ ++LS+Y SG +A LLE +K ++P
Sbjct: 615 GECYDE--AAKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQ 672
Query: 62 DVNT---------------------------------YSILIKSCLKAFAFDKVQALLSD 88
+ + LI+ CL+ + + SD
Sbjct: 673 MITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSD 732
Query: 89 MSTQGIRPNTVTYNTL------------------------------------IDAYGRAK 112
M GI+ + Y ++ I+AYGR K
Sbjct: 733 MRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLK 792
Query: 113 MFAEMELTLVKMLSEDC---EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
++ + E ++ L + C + VW N + A+ SG + + G P+++
Sbjct: 793 LWQKAE-SVAGNLRQRCITVDRKVW--NALIEAYAASGCYERARAIFNTMMRDGPSPTVD 849
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
T N LL + G +++ V++ +Q + + + +++DAF RAG++ +++ ++ M
Sbjct: 850 TINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGM 909
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
++ P+ + R + + ++L ++ + D +N ++ Y ++ F
Sbjct: 910 KAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDF 969
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ V + +++ G +PD+ TY T++ Y
Sbjct: 970 RKTIQVYQRIKEDGLEPDEDTYNTLIVMY 998
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
V+ + G+ + +E L P+ L +++ G A + E L +V F+
Sbjct: 191 VVKSVGQESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQ-EAL-AVEVFMRAEP 248
Query: 269 IMLDTV-FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG--MKN 325
+TV +N ++ Y R F +++ +L++M++RGCKPD V++ T++ A G M N
Sbjct: 249 SAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPN 308
Query: 326 HAKEFQDLVEKMDETCLAMKRPD 348
A +E ++E + RPD
Sbjct: 309 LA------IELLNEVRRSGLRPD 325
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 165/338 (48%), Gaps = 5/338 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q A E+F A + Q + A++ Y R+G F+K + M+ C+
Sbjct: 239 VLGKANQEGIAVEIF-AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRER-GCE 296
Query: 61 PDVNTYSILIKSCLKAFAFDKVQA--LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ +++ LI + +K+ A A LL ++ G+RP+ +TYNTLI A R E
Sbjct: 297 PDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAI 356
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M S C+PD+WT N + +G G E +EK +S G P T+N LL ++
Sbjct: 357 GVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAF 416
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G+ EK+ + E M K + +TYN +I +G+ G + L+R M+S P
Sbjct: 417 SKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDA 476
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ G A K E+ V+ + ++ + ++ L+ AY ++ E +
Sbjct: 477 VTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNR 536
Query: 299 MQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVE 335
M++ G K D + Y M+ + N +K A +Q+++E
Sbjct: 537 MRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIE 574
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRS-----GLFDKAFSLLEHMKNTPDCQPDV 63
EK +E+F M + GC+ + SF L++A +S GL A LL+ + +PD+
Sbjct: 281 EKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGL---AIELLDEVGKF-GLRPDI 336
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI +C + + + S M + +P+ TYN +I YGR + E K
Sbjct: 337 ITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEK 396
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S PD T N L AF G + + E+ G T+N ++ YGK G
Sbjct: 397 LKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGR 456
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+ + VTY ++ID G+A +++ + M +KP+ T +
Sbjct: 457 HDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSA 516
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ AY G+ + + S I D + ++ ++D + R + + + M + G
Sbjct: 517 LICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAG 576
Query: 304 CKPDKVTYRTMVRAYSTNGM 323
PD Y M+ A M
Sbjct: 577 FTPDTGLYEVMLPALVRENM 596
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 48/368 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F M+ EG +S LL A G + + +++ ++ D ++ SI
Sbjct: 841 ERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQ---DMDLKISKSSI 897
Query: 69 LIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ L+AFA +VQ + + M G P Y +I R K ++ + L +M
Sbjct: 898 LL--MLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM 955
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+PD+ N L+ + + + M Y+ Q AG+ P T+N L+ Y +
Sbjct: 956 GEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRP 1015
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR----------------------------- 215
E+ ++M M+ TY +I AF +
Sbjct: 1016 EEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLM 1075
Query: 216 ------AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+GD ++ E L +M+ I+P+ T+ L+ +YG +G+PE+ +L+ +
Sbjct: 1076 MKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGA 1135
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGV--LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+LDT+ ++ ++DAY LK G+ L M++ +PD + +RA S +G N A
Sbjct: 1136 VLDTLPYSSVIDAY--LKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDA 1193
Query: 328 KEFQDLVE 335
+ ++
Sbjct: 1194 NNLLNALQ 1201
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 155/332 (46%), Gaps = 2/332 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K +Q + A +LF M G + + + +++S Y R G + A LL H + +V
Sbjct: 729 KSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNV 788
Query: 64 NTYSI-LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ I +I++ K + ++++ ++ + + + +N LI AY + +
Sbjct: 789 TVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFN 848
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M+ E P V ++N L+A G++ + ++ Q ++ S ++ ++L+++ +AG
Sbjct: 849 TMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAG 908
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ V M+ Y T+ Y ++I R ++ + + M KP
Sbjct: 909 NLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFN 968
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+++ Y + + +G + + I ++ + D +N L+ Y R E ++ M+
Sbjct: 969 SVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSL 1028
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
G +P + TYR+M+ A+S + + A+E F++L
Sbjct: 1029 GLEPKRDTYRSMIAAFSKQQLYDQAEELFEEL 1060
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ELF+ + G + + ++ Y SG KA +LLE MK +P+ T +
Sbjct: 1051 DQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEA-GIEPNTATMHL 1109
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
L+ S K+ ++ +L ++ T G +T+ Y+++IDAY G AK E L +M
Sbjct: 1110 LMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIE---KLTEMK 1166
Query: 126 SEDCEPD--VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
EPD +WT C +RA SG+++ Q+ G I
Sbjct: 1167 EAAIEPDHRIWT--CFIRAASLSGEVNDANNLLNALQAVGFDLPI 1209
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
L G + Q + + K +S I ++ +N ++ Y + G+FEK++ + M++
Sbjct: 237 LSVLGKANQEGIAVEIFAKAESV-IADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGC 295
Query: 200 SWTIVTYNIVIDA--------FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
IV++N +I+A G A +L F L +P +T +L+ A
Sbjct: 296 EPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGL------RPDIITYNTLISACSRE 349
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
++ V ++++ D +N ++ YGR + + + E ++ G PD VTY
Sbjct: 350 SNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTY 409
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++ A+S G + ++ +D+ E+M
Sbjct: 410 NSLLYAFSKEG---NTEKVRDISEEM 432
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+PE+ L M G + ++ ++++A+ + L+D+A L E +++ + D + Y
Sbjct: 1014 RPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN-GYKLDRSFY 1072
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++K + K + LL M GI PNT T + L+ +YG++ E + L + +
Sbjct: 1073 HLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRT 1132
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + + A+ G + + + A I+P + + + +G
Sbjct: 1133 MGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVND 1192
Query: 187 MSAVMEYMQKYHYSWTI 203
+ ++ +Q + I
Sbjct: 1193 ANNLLNALQAVGFDLPI 1209
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + ++A L++ M G + + ++T L+ G++ ++A ++ M + +
Sbjct: 450 MYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDA-GVK 508
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P ++TYS LI + K + + + M GI+ + + Y+ ++D + R +
Sbjct: 509 PTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAAL 568
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+M+ PD L A D +E+ + + G S+N +I
Sbjct: 569 YQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELG---SMNPHDI 618
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 9/349 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C NT+++T +++ YG++ + + MK+ C+P
Sbjct: 252 LLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSV-GCKP 310
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + AFG +G E +++ + G++P++ + +LL ++ ++
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI------K 235
G+ + VM + K N +++A+GRAG L ME LF M ER
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAM--ERGDGAIAGA 488
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P T +V AYG AG +++ + R + + D V + + AY R K + + V
Sbjct: 489 PDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRV 548
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
E M GC PD T + ++ A S K + K +T A+
Sbjct: 549 FEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDAKTLFAL 597
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 7/325 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +Q +A + A+++ C ++ LL AY SG +A ++ M+ P
Sbjct: 183 GQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRN-GIPPT 241
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA +K + M + R NT TY +I+ YG+A
Sbjct: 242 ATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFR 301
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C+P++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 302 EMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 361
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + M+ +YNI++DAFGRAG ++ E F+ ++ + ++P+ +
Sbjct: 362 LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHM 421
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ A+ +G + V+ + S + DT N +++AYGR +M+ + M +R
Sbjct: 422 LLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAM-ER 480
Query: 303 G-----CKPDKVTYRTMVRAYSTNG 322
G PD TY MV AY G
Sbjct: 481 GDGAIAGAPDTSTYNVMVNAYGRAG 505
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LIDAYG+ + +E E + +L C P T LRA+ SGQ+ E
Sbjct: 169 RPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEG 228
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q GI P+ +N LD KA EK V + M+K TY ++I+ +G
Sbjct: 229 VISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYG 288
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +FR M+S KP+ T +LV A+ G EK V + + D
Sbjct: 289 KANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 348
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDL 333
+N L++AY R + +M+ GC+PD+ +Y +V A+ G+ A+ FQ+L
Sbjct: 349 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 334 VEK 336
++
Sbjct: 409 KQQ 411
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 132 DVW--TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK--------- 180
D+W +N ++ N + C + + +P I +N+L+D+YG+
Sbjct: 134 DLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEA 193
Query: 181 --------------------------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+G + V+ MQ+ T YN +D
Sbjct: 194 AYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLL 253
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A ++ +++ M+ ER + + T ++ YG A +P V R + + +
Sbjct: 254 KARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNIC 313
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ LV+A+ R + + V E MQQ G +PD Y ++ AYS G+ A E L+
Sbjct: 314 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 373
Query: 335 EKM 337
E M
Sbjct: 374 EHM 376
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 5/322 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C NTZ++ +++ YG++ + + MK+ C+P
Sbjct: 252 LLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSV-GCKP 310
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + AFG +G E +++ + G++P++ + +LL ++ ++
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR----SERIKPS 237
G+ + VM + K N +++A+GRAG L ME LF M + P
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPD 490
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T LV AYG AG +++ + R + + D V + + AY R K + + V E
Sbjct: 491 TSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFE 550
Query: 298 VMQQRGCKPDKVTYRTMVRAYS 319
M GC PD T + ++ A S
Sbjct: 551 EMVDAGCYPDAGTAKVLLAACS 572
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 5/324 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +Q +A + A+++ C ++ LL AY SG +A ++ M+ P
Sbjct: 183 GQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRN-GIPPT 241
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA +K + M + R NT TY +I+ YG+A
Sbjct: 242 ATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFR 301
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C+P++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 302 EMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 361
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + M+ +YNI++DAFGRAG ++ E F+ ++ + ++P+ +
Sbjct: 362 LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHM 421
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ- 301
L+ A+ +G + V+ + S + DT N +++AYGR +M+ + M++
Sbjct: 422 LLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERG 481
Query: 302 ---RGCKPDKVTYRTMVRAYSTNG 322
PD TY +V AY G
Sbjct: 482 DGASAGAPDTSTYNVLVNAYGRAG 505
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 13/262 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ M G + + ++ AL+ AY R+GL A FSL+EHM C+PD +
Sbjct: 329 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM----GCEPDRAS 384
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+IL+ + +A + +A ++ QG+RP ++ L+ A+ R+ A E + ++
Sbjct: 385 YNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-----SAGIQPSINTFNILLDSYGK 180
PD + +N L A+G +G++D ME+ + + SAG P +T+N+L+++YG+
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGA-PDTSTYNVLVNAYGR 503
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ ++M A + + +VT+ I A+ R + Q +F M P T
Sbjct: 504 AGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGT 563
Query: 241 LCSLVRAYGHAGKPEKLGSVLR 262
L+ A + E++ +++R
Sbjct: 564 AKVLLAACSDERQVEQVTAIVR 585
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LIDAYG+ + +E E + +L C P T LRA+ SGQ+ E
Sbjct: 169 RPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEG 228
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q GI P+ +N LD KA EK V + M+K TY ++I+ +G
Sbjct: 229 VISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYG 288
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +FR M+S KP+ T +LV A+ G EK V + + D
Sbjct: 289 KANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 348
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDL 333
+N L++AY R + +M+ GC+PD+ +Y +V A+ G+ A+ FQ+L
Sbjct: 349 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 334 VEK 336
++
Sbjct: 409 KQQ 411
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 140/313 (44%), Gaps = 9/313 (2%)
Query: 30 FTALLSAYGRSGLFDKA----FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ L+ AYG+ +A +LLE C P +TY++L+++ + + + +
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLE-----ARCVPTEDTYALLLRAYCGSGQLHRAEGV 229
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+S+M GI P YN +D +A+ + +M E C + T + +G
Sbjct: 230 ISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGK 289
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ Q + + + + +S G +P+I T+ L++++ + G EK V E MQ+ + +
Sbjct: 290 ANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYA 349
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +++A+ RAG + +F LM +P + LV A+G AG ++ + + +
Sbjct: 350 YNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELK 409
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ L+ A+ R A + V+ + + G +PD M+ AY G +
Sbjct: 410 QQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLD 469
Query: 326 HAKEFQDLVEKMD 338
+ +E+ D
Sbjct: 470 DMERLFAAMERGD 482
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P+ A E+F M GC+ + S+ L+ A+GR+GL +A + + +K +P + ++
Sbjct: 363 PQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ-GMRPTMKSHM 421
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV---------------------------- 99
+L+ + ++ + + +++ + G+RP+T
Sbjct: 422 LLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERG 481
Query: 100 -----------TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
TYN L++AYGRA ME + + DV T + A+ +
Sbjct: 482 DGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKE 541
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ +E+ AG P T +LL + E+++A++ M K
Sbjct: 542 YGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHK 589
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 132 DVW--TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK--------- 180
D+W +N ++ N + C + + +P I +N+L+D+YG+
Sbjct: 134 DLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEA 193
Query: 181 --------------------------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+G + V+ MQ+ T YN +D
Sbjct: 194 AYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLL 253
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A ++ +++ M+ ER + + T ++ YG A +P V R + + +
Sbjct: 254 KARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNIC 313
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ LV+A+ R + + V E MQQ G +PD Y ++ AYS G+ A E L+
Sbjct: 314 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 373
Query: 335 EKM 337
E M
Sbjct: 374 EHM 376
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 167/337 (49%), Gaps = 9/337 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC ++ + AL++A+ ++ KA E MK
Sbjct: 141 VMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAKALIKALGYFEKMKGM 200
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP+V TY+IL+++ +A ++V AL D+ + P+ TYN ++DAYG+ M E
Sbjct: 201 QRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIRE 260
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME L +M S C+PD+ T N + ++G D ME+ ++ + +P++ TFN ++
Sbjct: 261 MESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMIT 320
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA E +V++ M K Y+ +TY +I +G + + +F M +
Sbjct: 321 NYGKARQKENAESVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEV 380
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P + + N ++ D+ + L AY + ++ +L
Sbjct: 381 KVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLL 440
Query: 297 EVMQQRGCKPDKVTYRTMVRAY-----STNGMKNHAK 328
+ M + G P+K + + A+ S+ +N+AK
Sbjct: 441 KHMDRDGIIPNKRFFLDALGAFKSLPASSGNQQNNAK 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS LI K L S+M G RP++ YN LI A+ +K A+
Sbjct: 131 DSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAK----- 185
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++A G ++ M++C QP++ T+NILL ++ +A
Sbjct: 186 ----------------ALIKALGYFEKMKGMQRC---------QPNVVTYNILLRAFAQA 220
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ +++A+ + + + S I TYN V+DA+G+ G +++ME + M+S + KP +T
Sbjct: 221 RNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITF 280
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ +YG +K+ V + + +S FN ++ YG+ + + VL+ M +
Sbjct: 281 NLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTK 340
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDET 340
P+ +TY +++ Y + A+E F D++E E
Sbjct: 341 MKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEV 380
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 174/353 (49%), Gaps = 38/353 (10%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVN 64
K+ A ++F M + GC+ ++ A+L+ YG+ G+ + K +L++ MK PD+
Sbjct: 193 KKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMK-CHGLAPDLC 251
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-------- 116
TY+ LI C +++ L ++ G RP+ VTYN L+D YG+++ E
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 117 ------------------------MELTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+E LV KM+ + +PDV+T L F N+G+
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKE 371
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + +E+ + G +P+I TFN L+ YG G FE+M V + ++ S IVT+N +
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+ FG+ G ++ +F M+ R P T +L+ AYG G ++ + + + + +
Sbjct: 432 LAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGV 491
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
D +N ++ R + + + VL M+ GCKP++VTY +++ AY+ NG
Sbjct: 492 SPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA-NG 543
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++P++A E+ + M + ++ +L+SAY R GL + A L M + +PD
Sbjct: 296 GKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDK-GIKPD 354
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ + A + + +M G +PN T+N LI YG F EM
Sbjct: 355 VYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFK 414
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ C PD+ T N L FG +G + +E+ + + P +TFN L+ +YG+ G
Sbjct: 415 EIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCG 474
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ A + M + S + TYN V+ R G +Q E + M+ KP+ VT
Sbjct: 475 SFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYS 534
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + E++ ++ I + I V LV ++ E + ++R
Sbjct: 535 SLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKR 594
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD T M+ Y M A E
Sbjct: 595 GISPDVTTSNAMLSIYGRKKMVPKANEI 622
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 152/333 (45%), Gaps = 12/333 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A E+F+ M GC N +F AL+ YG G F++ + + +K C PD+ T++
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK-VCKCSPDIVTWNT 430
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + +V + +M P T+NTLI AYGR F + +ML
Sbjct: 431 LLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD+ T N L G + EK + + G +P+ T++ LL +Y E+M+
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMN 550
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAF----GRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
A+ E + YS TI T+ +++ + L + E F R I P T ++
Sbjct: 551 ALAEEI----YSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAM 606
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ YG K +L F+ S + L +N L+ Y R + F + + + + +G
Sbjct: 607 LSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGI 666
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+PD ++Y ++ AY N M + AK ++E+M
Sbjct: 667 EPDVISYNIVIYAYCRNDMMDEAKR---IIEEM 696
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M +F L+SAYGR G FD+A + + M PD++TY+ ++ +
Sbjct: 447 VFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEA-GVSPDLSTYNAVLATL 505
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + +L++M G +PN VTY++L+ AY + M ++ S +
Sbjct: 506 ARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHA 565
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E+ + +F+ GI P + T N +L YG+ K + ++ +
Sbjct: 566 VLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNF 625
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + + ++ +YN ++ + R + + E +FR + + I+P ++ ++ AY
Sbjct: 626 MYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDM 685
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ ++ + + D V +N + AY F E V+ M ++GCKP+ TY +
Sbjct: 686 MDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNS 745
Query: 314 MVRAYSTNGMKNHAKEF 330
+V Y +++ A F
Sbjct: 746 IVDWYCKLKLRDEACSF 762
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 42/377 (11%)
Query: 12 HELFQAMVDEGCDAN-TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN--TYSI 68
HE+ + D+ ++ + ++ G + FD A SL + ++ D +N ++
Sbjct: 90 HEILPLLFDQPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAV 149
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K + +LL ++ G + Y +LI AY K + + KM
Sbjct: 150 IVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVG 209
Query: 129 CEPDVWTMNCTLRAFGNSG-----------------------QIDTMEKC---------- 155
CEP + T N L +G G +T+ C
Sbjct: 210 CEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEA 269
Query: 156 ---YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+E+ + AG +P T+N LLD YGK+ ++ V++ M+ + ++VTYN ++ A
Sbjct: 270 LDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSA 329
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ R G L+ L R M + IKP T +L+ + +AGK E V + +
Sbjct: 330 YVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPN 389
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
FN L+ YG F EM V + ++ C PD VT+ T++ + NGM + E
Sbjct: 390 ICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDS---EVSG 446
Query: 333 LVEKMDETCLAMKRPDF 349
+ E+M + A +R F
Sbjct: 447 VFEEMKRSRFAPERDTF 463
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M N+ F+ LL+ Y G + K F +L+ MK+ +PD Y++
Sbjct: 393 ESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNV 451
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID---AYGRAKMFAEMELTLVKML 125
+I + K D M ++GI P+ VT+NTLID +GR + EM M
Sbjct: 452 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM---FEAME 508
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P T N + ++G+ + D M++ K +S GI P++ T L+D YGK+G F
Sbjct: 509 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 568
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+E M+ + YN +I+A+ + G +Q FR+M S+ +KPS + L SL+
Sbjct: 569 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 628
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + +VL+++ + + D V + L+ A R+ F ++ GV E M GCK
Sbjct: 629 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCK 688
Query: 306 PDKVTYRTMVRA 317
PD+ R+M+R+
Sbjct: 689 PDRKA-RSMLRS 699
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P +A +L G A T + +++SA SG +A +L E ++ + +P
Sbjct: 281 FAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQS-GIKP 339
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +K + ++S+M +G+ P+ TY+ LIDAY A + + L
Sbjct: 340 RTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 399
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + D +P+ + + L + + G+ + ++ +S G++P +N+++D++GK
Sbjct: 400 KEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 459
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + M VT+N +ID + G E +F M P T
Sbjct: 460 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 519
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ +YG + + + +L + + I+ + V LVD YG+ F + LE M+
Sbjct: 520 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 579
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 580 VGLKPSSTMYNALINAYAQRGLSEQA 605
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 168/374 (44%), Gaps = 42/374 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ + G T+++ ALL Y ++G A ++ M+ PD +TYS+L
Sbjct: 324 EAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKR-GVSPDEHTYSLL 382
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + A ++ + +L +M T ++PN+ ++ L+ Y + + L +M S
Sbjct: 383 IDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGV 442
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD N + FG +D +++ S GI+P T+N L+D + K G
Sbjct: 443 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 502
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M++ TYNI+I+++G M+ L M+S+ I P+ VT +LV YG
Sbjct: 503 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 562
Query: 250 HAG-----------------KP------------------EKLGSVLRFIDNSDIMLDTV 274
+G KP E+ + R + + + +
Sbjct: 563 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 622
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
N L++A+G + AE VL+ M++ G KPD VTY T+++A +FQ +
Sbjct: 623 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI------RVDKFQKVP 676
Query: 335 EKMDETCLAMKRPD 348
+E ++ +PD
Sbjct: 677 GVYEEMIMSGCKPD 690
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 5/332 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ EK +E F ++ + ++ AL+ A R+ +KA +L+ M+ Q D Y
Sbjct: 181 RSEKLYEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQD-GYQSDFVNY 237
Query: 67 SILIKSCLKAFAFDKV--QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
S++I+S + D V Q L ++ + + N +I + ++ + L
Sbjct: 238 SLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMA 297
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ T+ + A NSG+ E +E+ + +GI+P +N LL Y K G
Sbjct: 298 QATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPL 357
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++ M+K S TY+++IDA+ AG + + + M + ++P+ L
Sbjct: 358 KDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRL 417
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y G+ +K VL+ + + + D F+N ++D +G+ C + M G
Sbjct: 418 LAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 477
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+PD+VT+ T++ + +G A+E + +E+
Sbjct: 478 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 509
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 149/330 (45%), Gaps = 3/330 (0%)
Query: 2 LGKCKQPEKA--HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L +C + + L++ + + + + Q ++ + +SG +A LL M
Sbjct: 244 LTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLL-GMAQATGL 302
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
T +I + + + +AL ++ GI+P T YN L+ Y + + EL
Sbjct: 303 SAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAEL 362
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +M PD T + + A+ N+G+ ++ ++ ++ +QP+ F+ LL Y
Sbjct: 363 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYR 422
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++K V++ M+ YN+VID FG+ L F M SE I+P V
Sbjct: 423 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 482
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G+ + ++ + +N ++++YG + + +MK +L M
Sbjct: 483 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM 542
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ +G P+ VT+ T+V Y +G N A E
Sbjct: 543 KSQGILPNVVTHTTLVDVYGKSGRFNDAIE 572
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + A F M+ EG + + ++ L+ + + G A + E M+ C P
Sbjct: 456 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLP 514
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+I+I S +D ++ LL M +QGI PN VT+ TL+D YG++ F + L
Sbjct: 515 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 574
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S +P N + A+ G + + S G++PS+ N L++++G+
Sbjct: 575 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 634
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ AV++YM++ +VTY ++ A R +++ ++ M KP
Sbjct: 635 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKP 689
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 170/344 (49%), Gaps = 30/344 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + E+A +F+ + + G T+++ ALL Y ++G A S++ M+ + P
Sbjct: 372 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS-GFSP 430
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +TYS+LI + A ++ + +L +M G+RPN+ ++ ++ +Y + + L
Sbjct: 431 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL 490
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PD N + FG +D +++ + G+QP T+N L+D + K+
Sbjct: 491 REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 550
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG---RAGDLK------------------ 220
GH K + E MQ+ S TYNI+I++FG R D+K
Sbjct: 551 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 610
Query: 221 -------QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
Q FR+MR++ +KPS + L SL+ A+G + + SVL+++ +D+ D
Sbjct: 611 TTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDV 670
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + L+ A R++ F ++ V E M GC PD+ R M+R+
Sbjct: 671 VTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKA-RAMLRS 713
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 158/335 (47%), Gaps = 10/335 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYS 67
EK +E F ++ + ++ AL+ A R+ +KA +L+ M+ D P D YS
Sbjct: 239 EKLYEAF--LLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRR--DGYPSDFVNYS 294
Query: 68 ILIKSCLKAFAFDK--VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I+S + D +Q + +++ + I + N +I + ++ L +
Sbjct: 295 FIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQ 354
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P T+ + A GN+G+ + E +E+ + G+ P +N LL Y K G +
Sbjct: 355 GNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLK 414
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+++ M++ +S TY+++IDA+ AG + + + M + ++P+ ++
Sbjct: 415 DAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 474
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+Y GK +K VLR + NS + D F+N ++D +G+ C + M+ G +
Sbjct: 475 ASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQ 534
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
PD VT+ T++ + +G N A+E L E M E+
Sbjct: 535 PDAVTWNTLIDCHCKSGHHNKAEE---LFEAMQES 566
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 142/303 (46%), Gaps = 1/303 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+++ + + + + Q ++ + +SG ++A S L ++ P T +I
Sbjct: 312 QKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGN-GLSPKTATLVAVIT 370
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+ A ++ +A+ ++ G+ P T YN L+ Y + + E + +M P
Sbjct: 371 ALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSP 430
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T + + A+ N+G+ ++ ++ +++G++P+ F+ +L SY G ++K V+
Sbjct: 431 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL 490
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+ S YN++ID FG+ L F MR E ++P VT +L+ + +
Sbjct: 491 REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 550
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G K + + S T +N +++++G + + ++K +L MQ +G + VTY
Sbjct: 551 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 610
Query: 312 RTM 314
T+
Sbjct: 611 TTL 613
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + +A LF+ + + G + T+++ ALL Y R+G A ++ M+ +P
Sbjct: 286 LGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKA-GVKP 344
Query: 62 DVNTYSILI------------KSCLK----------AFAFDKVQA-------------LL 86
D TYS+LI + LK ++ F ++ A +L
Sbjct: 345 DEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVL 404
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
DM + G++P+ YN +ID +G+ T +MLSE PD+ T N + S
Sbjct: 405 KDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKS 464
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ D E+ + + Q G P I T+NI+++S G+ +E+++A + MQ +TY
Sbjct: 465 GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++D +G++G +++S KP+ +L+ AY G E + R +
Sbjct: 525 TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTT 584
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + N L++A+G + AE VL+ M++ +PD VTY T+++A
Sbjct: 585 EGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKA 635
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M N+ F+ +L+ Y G + K+F +L+ MK++ QPD + Y++
Sbjct: 363 ESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSS-GVQPDRHFYNV 421
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K D A M ++GI P+ VT+NTLID + GR M E+ +M
Sbjct: 422 MIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEEL---FSEMQ 478
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P + T N + + G + + + K QS G+QP+ T+ L+D YGK+G F
Sbjct: 479 QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFS 538
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+E ++ + T YN +I+A+ + G + FRLM +E + PS + L SL+
Sbjct: 539 DAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLI 598
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + +VL+++ ++I D V + L+ A R++ F ++ V E M GC
Sbjct: 599 NAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCT 658
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 659 PDRKA-RAMLRS 669
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 152/326 (46%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P +A G + + A++ A G SG +A +L E ++ +P
Sbjct: 251 FSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN-GLEP 309
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K ++ + + ++S+M G++P+ TY+ LID Y A + + L
Sbjct: 310 RTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVL 369
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + +P+ + + L + + G+ + + +S+G+QP + +N+++D++GK
Sbjct: 370 KEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKY 429
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ A E M IVT+N +ID ++G E LF M+ P T
Sbjct: 430 NCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTY 489
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ + G + E++ + L + + + +++ + LVD YG+ F++ LEV++
Sbjct: 490 NIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 549
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 550 TGFKPTSTMYNALINAYAQRGLSELA 575
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 146/317 (46%), Gaps = 4/317 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK--VQALL 86
++ AL+ A R+G +KA +L+ M+ QPD YS +I+ ++ D +Q L
Sbjct: 171 TYNALIGACARNGDVEKALNLMSKMRRD-GYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 229
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+++ T I + N +I + +A L S P T+ + A GNS
Sbjct: 230 AEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNS 289
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ E +E+ + G++P +N LL Y + G + V+ M+K TY
Sbjct: 290 GRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTY 349
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++ID + AG + + + M + ++P+ ++ Y G+ +K VL+ + +
Sbjct: 350 SLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKS 409
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S + D F+N ++D +G+ C E M G PD VT+ T++ + +G +
Sbjct: 410 SGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDM 469
Query: 327 AKE-FQDLVEKMDETCL 342
A+E F ++ ++ C+
Sbjct: 470 AEELFSEMQQRGYSPCI 486
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 157/352 (44%), Gaps = 36/352 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +P++A ++ MV G + ++ +L+SAY R G+ D+A L M +PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK-GTKPD 383
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ +A + ++ +M G +PN T+N I YG F EM
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ PD+ T N L FG +G + +++ + AG P TFN L+ +Y + G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
FE+ V M + + TYN V+ A R G +Q E + M R KP+ +T C
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 243 SLVRAYGHAGKPEKLGSVLR-----FIDNSDIMLDTVF---------------------- 275
SL+ AY + + + S+ I+ ++L T+
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 276 --------FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
N +V YGR + A+ GVL+ M++RG P TY +++ +S
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 174/350 (49%), Gaps = 40/350 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A +F+ M ++GC ++ +L+ +G+ G ++K SL+E MK + PD TY+
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK-SDGIAPDAYTYNT 284
Query: 69 LIKSCLKA-----------------FAFDKVQ------------------ALLSDMSTQG 93
LI C + F++DKV +L++M G
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 94 IRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
P+ VTYN+LI AY R M E MEL +M + +PDV+T L F +G++++
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELK-NQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+E+ ++AG +P+I TFN + YG G F +M + + + S IVT+N ++
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
FG+ G ++ +F+ M+ P T +L+ AY G E+ +V R + ++ + D
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N ++ A R + + + VL M+ CKP+++TY +++ AY+ NG
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NG 572
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK + A +F + ++G + S+T+L+SA+ SG + +A ++ + M+ C+
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED-GCK 240
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++K+ +L+ M + GI P+ TYNTLI R + E
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + D T N L +G S + K + G PSI T+N L+ +Y
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G ++ + M + + TY ++ F RAG ++ +F MR+ KP+
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + ++ YG+ GK ++ + I+ + D V +N L+ +G+ +E+ GV + M
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
++ G P++ T+ T++ AYS G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCG 503
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 159/325 (48%), Gaps = 1/325 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++F L+SAY R G F++A ++ M + PD++TY+ ++ +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAAL 534
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + +L++M +PN +TY +L+ AY K M ++ S EP
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E+ + + + G P I T N ++ YG+ K + V++Y
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ ++ ++ TYN ++ R+ D + E + R + ++ IKP ++ +++ AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ + NS I+ D + +N + +Y F E GV+ M + GC+P++ TY +
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMD 338
+V Y K+ AK F + + +D
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNLD 799
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 146/375 (38%), Gaps = 42/375 (11%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP--DVNTYSILI 70
ELF+ D+ ++ + A L G FD A + D Q D + +I+I
Sbjct: 122 ELFEPFKDK-PESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIII 180
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + + + G + +Y +LI A+ + + E KM + C+
Sbjct: 181 SMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK 240
Query: 131 PDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNI---------------- 173
P + T N L FG G + + EK +S GI P T+N
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 174 -------------------LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
LLD YGK+ ++ V+ M +S +IVTYN +I A+
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
R G L + L M + KP T +L+ + AGK E S+ + N+ +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
FN + YG F EM + + + G PD VT+ T++ + NGM + E +
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS---EVSGVF 477
Query: 335 EKMDETCLAMKRPDF 349
++M +R F
Sbjct: 478 KEMKRAGFVPERETF 492
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 164/336 (48%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D C + ++ L++AY R+G +++ +L++ M +
Sbjct: 324 VFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTEN-GIK 382
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ +I + +A DK +L M G PN TYN ++ G+ EM
Sbjct: 383 PNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKI 442
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + C P+ T N L GN G +++ +++ +S G +P +TFN L+ + G+
Sbjct: 443 LCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGR 502
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M + ++ ++ TYN +++A R GD + E + + M+++ KPS +
Sbjct: 503 CGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETS 562
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ +Y G + + + + I + I + L+ A + + A M+ + +Q
Sbjct: 563 YSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQ 622
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ G KPD V + +M+ +S M + A E L+++
Sbjct: 623 KHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQE 658
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAE 116
D DV Y+ ++ S + +++ A+ M+ G+ P VTYN ++D YG+ + + +
Sbjct: 204 DYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNK 263
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ L +M S+ D +T + + A G G +D ++ + +S G P T+N LL
Sbjct: 264 ILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQ 323
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+GKAG + + ++M+ M+ + VTYN ++ A+ RAG ++ L M IKP
Sbjct: 324 VFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKP 383
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT +++ AYG A + +K S+ + S + +N ++ G+ EM +L
Sbjct: 384 NAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKIL 443
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
M+ GC P+++T+ TM+ GM + K FQ++
Sbjct: 444 CDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEM 481
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPD 62
+C + E+A +F+ M + G ++ +L YG+ G ++K LL+ M+ + D
Sbjct: 221 RCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR-SKGLGFD 279
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T S +I +C + D+ + + +QG P TVTYN L+ +G+A +++E +
Sbjct: 280 EFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMK 339
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M +C PD T N + A+ +G + + GI+P+ T+ ++++YG+A
Sbjct: 340 EMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAA 399
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K ++ + M++ + + TYN ++ G+ ++M + M+ + P+ +T
Sbjct: 400 QVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWN 459
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ G+ G + + V + + + D FN L+ A GR + + + + M +
Sbjct: 460 TMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEA 519
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G P TY ++ A + G
Sbjct: 520 GFTPSVATYNALLNALARRG 539
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 170/437 (38%), Gaps = 106/437 (24%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ L M + G N ++T +++AYGR+ DKA SL + MK + C P+V TY+
Sbjct: 367 EEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKES-GCAPNVCTYNA 425
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM-------FAEMEL-- 119
++ K +++ +L DM G PN +T+NT++ G M F EM+
Sbjct: 426 ILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCG 485
Query: 120 ---------TLV-----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
TL+ +ML P V T N L A G T E
Sbjct: 486 FEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAE 545
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGH------FEK--------------------- 186
+ ++ G +PS +++++L+SY K G+ EK
Sbjct: 546 SVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILAN 605
Query: 187 --------MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
M + +QK+ Y +V +N ++ F R + + L++ ++P
Sbjct: 606 FKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDL 665
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSD-----IMLDTVF------------------ 275
VT SL+ Y G+ K +LR + NS I +TV
Sbjct: 666 VTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSE 725
Query: 276 ------------FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+N V Y FAE+ VL M + C+P+++TY+ +V Y
Sbjct: 726 MISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKK 785
Query: 324 KNHAKEFQDLVEKMDET 340
A +F + +D++
Sbjct: 786 FKEAMDFVSTITDIDDS 802
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 162/333 (48%), Gaps = 2/333 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +LF + + + +++T +L +Y R G +++A ++ E M N
Sbjct: 183 ILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKM-NESGLS 241
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K +++K+ LL +M ++G+ + T +T+I A GR + E +
Sbjct: 242 PTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKE 301
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
V + S+ P T N L+ FG +G ++ + P T+N L+ +Y
Sbjct: 302 FFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYV 361
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG +E+ +A+++ M + VTY +I+A+GRA + + L+ M+ P+
Sbjct: 362 RAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVC 421
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G + E++ +L + + + +N ++ G +K V + M
Sbjct: 422 TYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEM 481
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ G +PD+ T+ T++ A G A++ D
Sbjct: 482 KSCGFEPDRDTFNTLITASGRCGSDIDAEKIYD 514
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C A +++ M++ G + ++ ALL+A R G + A S+++ MKN +P
Sbjct: 501 GRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNK-GFKPS 559
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+YS+++ S K + + D+ I P+ + TLI A + + A ME
Sbjct: 560 ETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQ 619
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ +PD+ N L F D + Q G+QP + T+N L+D Y + G
Sbjct: 620 ALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGG 679
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K ++ +Q +++YN VI F R G + + M S I+P VT
Sbjct: 680 ECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYN 739
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ V Y G ++ VL ++ D + + + +VD Y + K F E
Sbjct: 740 TFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKE 788
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 1/338 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK Q E+ ++ M +GC N ++ +LS G G+ + + MK+ +
Sbjct: 429 MLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSC-GFE 487
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +T++ LI + + + + + +M G P+ TYN L++A R + E
Sbjct: 488 PDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESV 547
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M ++ +P + + L ++ G + + + + I PS L+ + K
Sbjct: 548 IKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFK 607
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
M + +QK+ Y +V +N ++ F R + + L++ ++P VT
Sbjct: 608 CRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVT 667
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ Y G+ K +LR + NS D + +N ++ + R E L M
Sbjct: 668 YNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMI 727
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
RG +P VTY T V Y+ GM E + K D
Sbjct: 728 SRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHD 765
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 159/315 (50%), Gaps = 2/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E A + + M N F+ +LS+Y G + K+F +L M+N+ +PD
Sbjct: 386 GNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS-GVRPD 444
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++I + K D A M ++GI P+TVT+NTLID + RA E
Sbjct: 445 RVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFE 504
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P T N + +FG+ + D ++ +S G+ P+ T+ L+D YGK+G
Sbjct: 505 EMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSG 564
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F ++ M+ + YN +I+A+ + G +Q FR MR + +KPS + L
Sbjct: 565 RFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALN 624
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ A+G + + +VL+++ +D+ D V + L+ A R++ F ++ V E M
Sbjct: 625 SLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILS 684
Query: 303 GCKPDKVTYRTMVRA 317
GC PD+ R M+R+
Sbjct: 685 GCTPDRKA-RAMLRS 698
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 1/300 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G N Q+++ L+ AYG +G ++ A +L+ M+ + + QP+ +S ++ S
Sbjct: 366 MERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEAS-NVQPNAYVFSRILSSYRDKG 424
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ K +L +M G+RP+ V YN +ID +G+ T +MLSE EPD T N
Sbjct: 425 EWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWN 484
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ +G+ D E+ +E+ G P TFNI+++S+G ++ + ++ +M+
Sbjct: 485 TLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQ 544
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
VTY +ID +G++G M++ +KPS +L+ AY G E+
Sbjct: 545 GLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQA 604
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S R + + + N L++A+G + AE VL+ M++ KPD VTY T+++A
Sbjct: 605 VSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKA 664
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 153/326 (46%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K KA E + G T + A++ A G G +A ++ E M++ +P
Sbjct: 280 FAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDN-GLKP 338
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L++ +KA + ++S+M G+ PN TY+ LIDAYG A + + L
Sbjct: 339 RTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVL 398
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + +P+ + + L ++ + G+ + + +++G++P +N+++D++GK
Sbjct: 399 KEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKF 458
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ A + M VT+N +ID RAG + E LF M P T
Sbjct: 459 NCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTF 518
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ ++G + + + ++L + + ++ ++V + L+D YG+ F + L+ M+
Sbjct: 519 NIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKA 578
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 579 AGLKPSSTMYNALINAYAQRGLSEQA 604
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 162/339 (47%), Gaps = 8/339 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNT 65
Q EK +E F ++ + + ++ AL+SA R+ +KA +L+ M+ D P D
Sbjct: 180 QSEKLYEAF--LLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQ--DGYPSDFVN 235
Query: 66 YSILIKSCLKAFAFDK--VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS++I+S ++ D +Q L ++ + + N +I + +A ++ L
Sbjct: 236 YSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGV 295
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ T+ + A GN G+ E +E+ + G++P +N LL Y KAG
Sbjct: 296 VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ V+ M++ S TY+ +IDA+G AG + + + M + ++P+
Sbjct: 356 LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSR 415
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ +Y G+ +K VLR ++NS + D VF+N ++D +G+ C + M G
Sbjct: 416 ILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG 475
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETC 341
+PD VT+ T++ + G + A+E F++++E C
Sbjct: 476 IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPC 514
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 132/267 (49%), Gaps = 6/267 (2%)
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ +A+ +M G++P T YN L+ Y +A + + E + +M P+ T + +
Sbjct: 323 EAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLI 382
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
A+GN+G+ ++ ++ +++ +QP+ F+ +L SY G ++K V+ M+
Sbjct: 383 DAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVR 442
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
V YN++ID FG+ L F M SE I+P VT +L+ + AGK ++ +
Sbjct: 443 PDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEEL 502
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ FN +++++G + + ++K +L M+ +G P+ VTY T++ Y
Sbjct: 503 FEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGK 562
Query: 321 NGMKNHAKEFQDLVEKMDETCLAMKRP 347
+G F D +E +D+ A +P
Sbjct: 563 SG------RFNDAIECLDDMKAAGLKP 583
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 3/333 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M G + + A + ++G +A + + MK CQP TY++
Sbjct: 200 EKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDC-CQPSTETYTL 258
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA L ++M +Q +PN TY L++A+ R + + E ++ +
Sbjct: 259 LINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 318
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + A+ +G + + Q G +P ++NI++D+YG+ G E
Sbjct: 319 HEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQ 378
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M++ + T+ ++ +++ A+ +AGD+ + E + + ++P L S++ Y
Sbjct: 379 AVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLY 438
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ K+ VL +++ D +N L++ YGR F +M+G+ + + + KPD
Sbjct: 439 GRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDV 498
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
VT+ + + AYS K + K + E +D C
Sbjct: 499 VTWTSRLGAYSRK--KLYTKCLEIFEEMIDAGC 529
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K P++A E+FQ M + C +T+++T L++ +G++ A L M++ C+P
Sbjct: 228 LMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQ-KCKP 286
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + + G P+ YN L++AY RA
Sbjct: 287 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIF 346
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G G + + +E+ + GI P++ + +LL +Y KA
Sbjct: 347 SLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKA 406
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++ + + N +++ +GR G +ME + M S T
Sbjct: 407 GDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTY 466
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ YG AG EK+ + + + ++ D V + + AY R K + + + E M
Sbjct: 467 NILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMID 526
Query: 302 RGCKPDKVTYRTMVRAYST 320
GC PD T + ++ + S+
Sbjct: 527 AGCHPDGRTAKVLLSSCSS 545
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 156/347 (44%), Gaps = 45/347 (12%)
Query: 30 FTALLSAYGRSGLFDKA----FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
F ++ AYGR L+ A F L+E C P +TY++L+K+ + +K +A+
Sbjct: 151 FNLVIDAYGRKSLYKMAETTYFELIE-----ARCIPTEDTYALLLKAYCTSGLLEKAEAI 205
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEME----------LTLV------ 122
++M G+ P+ + YN ID +A ++F M+ TL+
Sbjct: 206 FAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGK 265
Query: 123 ------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
+M S+ C+P++ T + AF G + E+ +E+ Q G +P +
Sbjct: 266 ASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYA 325
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N L+++Y +AG + + MQ +YNI++DA+GR G + + +F M+
Sbjct: 326 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMK 385
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
I P+ + L+ AY AG K ++ + S + DT N +++ YGRL F
Sbjct: 386 RLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFG 445
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
+M+ VL M+ D TY ++ Y G + FQ L K
Sbjct: 446 KMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAK 492
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ + ++G + + ++ AL+ AY R+G A FSL++HM C+PD +
Sbjct: 305 EKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM----GCEPDRAS 360
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + + + QA+ +M GI P ++ L+ AY +A A+ E + ++
Sbjct: 361 YNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELH 420
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EPD + +N L +G GQ ME+ +S I+T+NIL++ YG+AG FE
Sbjct: 421 ESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFE 480
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
KM + + + + +VT+ + A+ R + +F M P T L+
Sbjct: 481 KMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLL 540
Query: 246 RAYGHAGKPEKLGSVLR 262
+ + E++ +V+R
Sbjct: 541 SSCSSEDQIEQVTTVIR 557
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+ + +N +IDAYGR ++ E T +++ C P T L+A+ SG ++ E +
Sbjct: 147 DVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIF 206
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ + G+ PS +N +D KAG+ ++ + + M++ + TY ++I+ G+A
Sbjct: 207 AEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKA 266
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
LF MRS++ KP+ T +LV A+ G EK + + D +
Sbjct: 267 SQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAY 326
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
N L++AY R + +MQ GC+PD+ +Y MV AY G+ A+
Sbjct: 327 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQ 378
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 36/152 (23%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ Q K E+ AM + ++ L++ YGR+G F+K
Sbjct: 437 LYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEK--------------- 481
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ L ++ + ++P+ VT+ + + AY R K++ +
Sbjct: 482 ---------------------MEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEI 520
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
+M+ C PD T L + + QI+ +
Sbjct: 521 FEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQV 552
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 163/327 (49%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ E AH LF M A+ +++ L++ +G+ G+FD A S L+ M+ D+
Sbjct: 171 RAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQD-RVSGDL 229
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ K + K ++ S + GI P+ V YNT+I+ +G+AK+F E L +
Sbjct: 230 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKE 289
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + D PD + + L F + + + + + T NI++D YG+
Sbjct: 290 MRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDM 349
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K +V+YN ++ +G A + +LFRLM+ + IK + VT +
Sbjct: 350 VKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNT 409
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + EK ++++ + I + + ++ ++ +G+ + + ++ G
Sbjct: 410 MIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSG 469
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY G+ HAK
Sbjct: 470 AEIDQVLYQTMIVAYEKAGLVGHAKRL 496
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 32/340 (9%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA +F + G + ++ +++ +G++ LF +A LL+ M+ D PD +YS L
Sbjct: 247 KAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAV-DVMPDTVSYSTL 305
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ ++ F + +++S+M + T N +ID YG+ M E + +M
Sbjct: 306 LNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGI 365
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP+V + N LR +G + + Q I+ ++ T+N ++ YGK EK +
Sbjct: 366 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATN 425
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY- 248
+++ MQK +TY+ +I +G+AG L + LF+ +RS + V +++ AY
Sbjct: 426 LVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYE 485
Query: 249 -----GHA-------------------------GKPEKLGSVLRFIDNSDIMLDTVFFNC 278
GHA G+ E+ V R ++ + D F C
Sbjct: 486 KAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFEC 545
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++D + R K + V E M+ G P+ ++ AY
Sbjct: 546 MIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAY 585
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 169/371 (45%), Gaps = 42/371 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L Q + EL+ + +G + + + +LLS R + ++ ++L+ +
Sbjct: 99 LLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLS---RESDWQRSLAILDWINEEALY 155
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P V Y++++++ L+A ++ L +M + + + TY+TLI +G+ MF + L
Sbjct: 156 TPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMF-DAAL 214
Query: 120 TLVKMLSED-------------------CE-----------------PDVWTMNCTLRAF 143
+ ++ + +D C+ PD+ N + F
Sbjct: 215 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVF 274
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G + ++ ++ + P +++ LL+ + + F + +V+ M++ + +
Sbjct: 275 GKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDL 334
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T NI+ID +G+ +K+ + LF MR I+P+ V+ +++R YG A + + R
Sbjct: 335 TTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG- 322
+ +I + V +N ++ YG+ + +++ MQ+RG +P+ +TY T++ + G
Sbjct: 395 MQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGK 454
Query: 323 MKNHAKEFQDL 333
+ A FQ L
Sbjct: 455 LDRSAMLFQKL 465
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA L Q M G + N +++ ++S +G++G D++ L + ++++ + D
Sbjct: 415 GKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSS-GAEID 473
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y +I + KA + LL ++ +P+ + T I +A E
Sbjct: 474 QVLYQTMIVAYEKAGLVGHAKRLLHELK----QPDNIPRTTAITILAKAGRIEEATWVFR 529
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ D+ C + F + + + + +EK ++ G P+ + ++L++YGK
Sbjct: 530 QAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLR 589
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
F+ A+ MQ+ +T + ++ +G D K++E LF + S+
Sbjct: 590 DFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSD 639
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 5/313 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F EG A Q F A++ Y RSG FD A LL+ M++ D +PD+ +++ LI
Sbjct: 207 AEDVFLRFAREG--ATVQVFNAMMGVYARSGRFDDARQLLDAMRDQ-DIEPDLVSFNTLI 263
Query: 71 KSCLKA--FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K+ A LL ++ G+RP+ +TYNTLI A + + +M++ +
Sbjct: 264 NARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE 323
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+WT N + G G+ E +++ G QP T+N LL ++ K G E++
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVE 383
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V E + K + +TYN +I +G+ G L L+ MR+ P VT LV +
Sbjct: 384 RVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSL 443
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + G VL + ++ + V F+ L+ AY + + + + M + G KPD+
Sbjct: 444 GKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDR 503
Query: 309 VTYRTMVRAYSTN 321
+ Y M+ ++ +
Sbjct: 504 LAYLVMLDVFARS 516
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL-LEHMKNTPDCQPDVNTYS 67
+ A +L AM D+ + + SF L++A +SG +L L H +PD TY+
Sbjct: 238 DDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYN 297
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + D A+ +M RP+ TYN ++ +GR E EL +++ +
Sbjct: 298 TLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK 357
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+PD T N L AF G ++ +E+ E+ AG + T+N ++ YGK G +
Sbjct: 358 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 417
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M+ + VTY +++D+ G+ + + + M +KP+ VT +L+ A
Sbjct: 418 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 477
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y +G+ + + S + D + + ++D + R ++ + M + G KPD
Sbjct: 478 YAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPD 537
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y+ ++ A + N E + +++ M+
Sbjct: 538 DGLYQVLLAALAKG---NEHDEIEGVIQDME 565
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F M+ +G +S ++ A G D+ + +++ +++ D + +T +
Sbjct: 799 EHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDL-DIKISKSTVLL 857
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++++ KA +V + + M G PN Y +I K F ++EL + +M
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN---------------- 172
+PD+ +N L + +G D + Y AG++P +T+N
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 977
Query: 173 -------------------ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
ILL + GKA +E+ + E M+ Y Y++++ +
Sbjct: 978 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 1037
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
A + + E+L M+ + I+P+ T+ L+ +YG +G P++ VL + +S++ + T
Sbjct: 1038 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEIST 1097
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ ++DAY R + ++ L M++ G +PD + + +RA S
Sbjct: 1098 LPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 155/328 (47%), Gaps = 14/328 (4%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++ C Q + A +F+ M+ C + ++ A++S +GR G +A + + +
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 357
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
QPD TY+ L+ + K ++V+ + ++ G R + +TYNT+I YG+ +
Sbjct: 358 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK---MGRL 414
Query: 118 ELTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+L L +M + C PD T + + G +I K E+ AG++P++ TF+ L
Sbjct: 415 DLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 474
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ +Y K+G + + M + + Y +++D F R+ + +++ L+R M +
Sbjct: 475 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 534
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP L+ A + +++ V++ ++ M V + L+ A +C ++
Sbjct: 535 KPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----ECISQGAS 590
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L+ +G +PD + +++ AY G
Sbjct: 591 LLKRACLQGYEPDGKSLLSILDAYEKMG 618
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + ++A +F+ +V++G + ++ +LL A+ + G ++ + E + + D
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA-GFRKD 397
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I K D L +M G P+ VTY L+D+ G+ +E L
Sbjct: 398 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 457
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M +P + T + + A+ SG+ D E+ +++ +G++P + ++LD + ++
Sbjct: 458 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSD 517
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-------GDLKQMEYLFRL----MRS 231
K+ + M K Y Y +++ A + G ++ ME +F + + S
Sbjct: 518 ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISS 577
Query: 232 ERIKPSCV--------------------TLCSLVRAYGHAGKPEKLGSVLRFI 264
IK C+ +L S++ AY GK EK S+L +I
Sbjct: 578 ILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWI 630
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 147/333 (44%), Gaps = 6/333 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE A++L N S A++ AYG+ L+ +A + ++ +K + D +
Sbjct: 728 PETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQ--ESGVDRRIW 785
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + ++ ++ +A+ M +G P + N ++ A E+ + + ++
Sbjct: 786 NALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQD 845
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + T+ L AF +G + + K Y ++AG P+++ + I++ F
Sbjct: 846 LDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRD 905
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ ++ M+ + +V N ++ + G+ + ++ + ++P T +L+
Sbjct: 906 VELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIV 965
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y +PE+ ++L + + + L+ A G+ K + + + E M+ +G +
Sbjct: 966 MYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRL 1025
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
++ Y M++ Y +NH+K + L+ M E
Sbjct: 1026 NRSIYHMMMKIY--RNARNHSKA-EHLLSAMKE 1055
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 144/374 (38%), Gaps = 74/374 (19%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLE----HMKNT----PDCQ------------ 60
+G + + +S ++L AY + G +K SLLE H+ N+ +C
Sbjct: 598 QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVD 657
Query: 61 -----------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT----- 98
D + Y LI +A F + + DM GI P+
Sbjct: 658 AIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPS 717
Query: 99 -------------------------VTYNTL------IDAYGRAKMFAEMELTLVKMLSE 127
++ N L I+AYG+ K++ + E VK L +
Sbjct: 718 FIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAE-NFVKGLKQ 776
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ D N + A+ SG + ++ G P++ + N ++ + G +++
Sbjct: 777 ESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDEL 836
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ +Q + T ++++AF +AGD+ ++ ++ M++ P+ ++
Sbjct: 837 YVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISL 896
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
H + + ++ ++ + D V N L+ Y F V + + G +PD
Sbjct: 897 LCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPD 956
Query: 308 KVTYRTMVRAYSTN 321
+ TY T++ YS N
Sbjct: 957 EDTYNTLIVMYSRN 970
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K E+A LF+ M +G N + ++ Y + KA LL MK +P
Sbjct: 1003 GKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED-GIEPT 1061
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T IL+ S + D+ + +L+ + + + +T+ Y+T++DAY R + ++ L+
Sbjct: 1062 IATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLL 1121
Query: 123 KMLSEDCEPD--VWT 135
+M + EPD VWT
Sbjct: 1122 EMKRDGVEPDHQVWT 1136
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 177/352 (50%), Gaps = 15/352 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQP 61
G+C++ A ++FQAM GC N ++ ++ A G+ G+ +A + + M+ +P
Sbjct: 249 GRCRE---ALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKE-GVEP 304
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT- 120
D T++ LI C + ++ Q + ++M +GI + T+NTLIDA + +MEL
Sbjct: 305 DRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKG---GQMELAA 361
Query: 121 --LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ M ++ P+V T + + +G G + Y + +G++P ++N L+D Y
Sbjct: 362 SIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIY 421
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G F+ + M++ +VTYN +IDA+G+ G K LF M+ E + P+
Sbjct: 422 AKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNV 481
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +L+ +Y AG + + +V + + D V ++ L+D+ + + +L+
Sbjct: 482 LTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQE 541
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ----DLVEKMDETCLAMKR 346
M Q G +P+ VTY +++ AY G + + + + V+K+ E + + R
Sbjct: 542 MTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVR 593
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 7/317 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E + +F M G + + +F L+ A + G + A S++ M+ + P+V TYS
Sbjct: 323 EDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGK-NISPNVVTYST 381
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K F++ +L DM G+RP+ V+YNTLID Y + F + + M
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV T N + A+G G+ ++K + G+ P++ T++ L+DSY KAG + +S
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++ +V Y+ +ID+ + G ++ L + M I+P+ VT SL+ AY
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV------MQQR 302
G G+ +KL +V + NS + + + ++ GVL MQQ
Sbjct: 562 GRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQF 621
Query: 303 GCKPDKVTYRTMVRAYS 319
G KP+ VT+ ++ A S
Sbjct: 622 GLKPNVVTFSAILNACS 638
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKMSAV 190
+V+ + + A+G SG+ K ++ + AG +P++ T+N ++D+ GK G ++ +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ MQK +T+N +I R G + + +F M+ I+ T +L+ A
Sbjct: 294 FDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCK 353
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ E S++ + +I + V ++ ++D YG+L CF E + M++ G +PD+V+
Sbjct: 354 GGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVS 413
Query: 311 YRTMVRAYSTNG 322
Y T++ Y+ G
Sbjct: 414 YNTLIDIYAKLG 425
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 121/303 (39%), Gaps = 77/303 (25%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A + M + N +++ ++ YG+ G F++A SL MK + +PD
Sbjct: 353 KGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKES-GVRPDR 411
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+Y+ LI K FD DM G++ + VTYN LIDAYG+ + + K
Sbjct: 412 VSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDK 471
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQ--------------------------IDTMEKC-- 155
M E P+V T + + ++ +G ID+ KC
Sbjct: 472 MKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGL 531
Query: 156 -------YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV---------------MEY 193
++ AGIQP+I T+N L+D+YG+ G +K+ AV ME
Sbjct: 532 VEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEV 591
Query: 194 --------------------------MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
MQ++ +VT++ +++A R L++ L
Sbjct: 592 VRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLE 651
Query: 228 LMR 230
MR
Sbjct: 652 QMR 654
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + A LF M EG N +++AL+ +Y ++G+ ++ K +PD
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRA-GLKPD 515
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V YS LI SC K + LL +M+ GI+PN VTYN+LIDAYGR ++E
Sbjct: 516 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKA 575
Query: 123 KMLSEDCEPDVWTMNCTLR-------AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M + + +M + A ++G + + + + Q G++P++ TF+ +L
Sbjct: 576 NMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVS-VFHEMQQFGLKPNVVTFSAIL 634
Query: 176 DSYGKAGHFEKMSAVMEYMQ 195
++ + ++ S ++E M+
Sbjct: 635 NACSRCASLQEASVLLEQMR 654
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 140 LRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTF-NILLDSYGKAGHFEKMSAVMEYMQKY 197
LR GN G+ + + YE Q ++ + +I++ + G+ G E V QK
Sbjct: 170 LRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKA 229
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ + Y+ ++ A+GR+G ++ +F+ M+ KP+ +T +++ A G G K
Sbjct: 230 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQ 289
Query: 258 G-SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ + + D + FN L+ R + + + V MQ+RG + D T+ T++
Sbjct: 290 ALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLID 349
Query: 317 AYSTNG 322
A G
Sbjct: 350 AVCKGG 355
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
+RSE K + + + +L G GK E V + + ++ +V AYGR
Sbjct: 195 LRSEWSKLASIMISTL----GRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGR 250
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
E V + M++ GCKP+ +TY T++ A G+ K+ D+ ++M + + R
Sbjct: 251 CREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVD--LKQALDIFDEMQKEGVEPDRIT 308
Query: 349 F 349
F
Sbjct: 309 F 309
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDC 59
+L + ++ ++ LF+ M EG N ++ +L YG+ G +D+ SL + MK+ +
Sbjct: 83 ILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL-EI 141
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD TY+ +I +C++ + L +M G PN VTYN L+D YG+ M E
Sbjct: 142 SPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASE 201
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+M + P++ T N + A+ +G D + S G+ P T+ L+ ++
Sbjct: 202 LLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFN 261
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A +EK M+K + + IVTYNI+ID +GR L M +F+ M+ + P V
Sbjct: 262 RAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLV 321
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL++++G+ G ++ +V R + + M FN L++ YGR + + +
Sbjct: 322 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGL 381
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G +P T+ ++ + + G
Sbjct: 382 LRTGLQPTVPTFAALMASLAREG 404
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 2/324 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTA-LLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LG+ + +KA E+F+ + C TA +LS G A L E +K
Sbjct: 12 LGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYS 71
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMEL 119
DV Y+ LI +A FD+ L M +G R N VTYN ++D YG R + ++
Sbjct: 72 LDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQS 131
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + PD +T N + A + + +++ + AG P+ T+N LLD YG
Sbjct: 132 LFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYG 191
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ S ++ M+ S IVTYN +I A+ RAG + L + + S+ + P
Sbjct: 192 KGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEF 251
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C+L+ A+ A + EK + ++ + V +N L+D YGR++ +M V + M
Sbjct: 252 TYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFM 311
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGM 323
Q++ C PD VT+ ++++++ GM
Sbjct: 312 QEKNCTPDLVTWNSLLKSFGNCGM 335
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 164/332 (49%), Gaps = 5/332 (1%)
Query: 1 MLGKCKQPEKAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M+ C Q E LFQ M + GC N ++ ALL YG+ G+ +A LL M+
Sbjct: 151 MITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEME-AA 209
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P++ TY+ LI + +A D+ AL + ++G+ P+ TY TLI A+ RA+ + +
Sbjct: 210 GISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKA 269
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
T +M +C P++ T N + +G ++D M K ++ Q P + T+N LL S
Sbjct: 270 LETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKS 329
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+G G ++S V M++ Y + T+NI+I+ +GR G + +++ + ++P+
Sbjct: 330 FGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPT 389
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ + G+ ++ V + + + + L L+ +Y F +++ ++
Sbjct: 390 VPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYID 449
Query: 298 VMQQRGCKP-DKVTYRTMVRAYSTNGMKNHAK 328
+++ +P + +T V AY M N A+
Sbjct: 450 ELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQ 481
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 176/443 (39%), Gaps = 110/443 (24%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++A EL M G N ++ L++AY R+GL D+A +L + + + C PD
Sbjct: 191 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLC-PD 249
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI + +A ++K ++M PN VTYN LID YGR + +M
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------- 163
M ++C PD+ T N L++FGN G + + + + + AG
Sbjct: 310 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369
Query: 164 ----------------IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+QP++ TF L+ S + G +++ V + M + + +
Sbjct: 370 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 429
Query: 208 IVIDAFGRAGDLKQM-EYLFRLMRSERIKPSCVTLCSLVRAY------------------ 248
+I ++ +G Q+ +Y+ L +S + S + + V AY
Sbjct: 430 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYD 489
Query: 249 -GHA----------------GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
GH+ G E+ +L I + + D V +NCL+ YGR + +
Sbjct: 490 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHK 549
Query: 292 MKGVLEVMQQRG-----------------------------------CKPDKVTYRTMVR 316
+ V+ M++ G +PD T+ T+V
Sbjct: 550 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVG 609
Query: 317 AYSTNGMKNHAKEFQDLVEKMDE 339
+YS+ G+ KE ++E M E
Sbjct: 610 SYSSLGL---YKEALSVIEYMTE 629
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 152/392 (38%), Gaps = 84/392 (21%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ EKA E F M C N ++ L+ YGR D + + M+ +C PD+
Sbjct: 262 RAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE-KNCTPDL 320
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR------------- 110
T++ L+KS +V + +M G P T+N LI+ YGR
Sbjct: 321 VTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKG 380
Query: 111 ---------AKMFAEMELTLVK-------------------MLSEDCEPDVWTMNCTLRA 142
FA + +L + LS+ C + + +
Sbjct: 381 LLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGL------IHS 434
Query: 143 FGNSGQ-------IDTMEKCYEKFQSA-----------------------------GIQP 166
+ NSGQ ID +EK ++ S G P
Sbjct: 435 YANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSP 494
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
I FN ++ K G E+ ++E ++K VTYN ++ +GR G + E +
Sbjct: 495 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVM 554
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
MR P+ +T +L+ +Y G+ + V + + + D FN LV +Y L
Sbjct: 555 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSL 614
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ E V+E M + GC+P ++T++ ++ Y
Sbjct: 615 GLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 129/318 (40%), Gaps = 37/318 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G C + +F+ M G +F L+ YGR G D + + + + T QP
Sbjct: 330 FGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRT-GLQP 388
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------- 114
V T++ L+ S + + + + + +M+ G++ + + LI +Y + F
Sbjct: 389 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 448
Query: 115 -----------------------------AEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
E +L L ++ PD+ N +
Sbjct: 449 DELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAK 508
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G I+ K E+ + A ++P T+N L+ YG+ G + K VM M++ + ++T
Sbjct: 509 RGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLIT 568
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN ++ ++ + G + +F M + R++P T +LV +Y G ++ SV+ ++
Sbjct: 569 YNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 628
Query: 266 NSDIMLDTVFFNCLVDAY 283
+ F L+D Y
Sbjct: 629 EHGCQPTQITFKALLDGY 646
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 182 GHFEKMSAVMEYM----QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G+ E++ A +E Q YS + Y +I RA + LF M+ E + +
Sbjct: 49 GNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGN 108
Query: 238 CVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
VT ++ YG G +++ S+ + + + +I D +N ++ A + E +
Sbjct: 109 AVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLF 168
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ M++ GC P++VTY ++ Y GM A E LVE
Sbjct: 169 QEMKEAGCCPNRVTYNALLDVYGKGGMHKEASEL--LVE 205
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 14/346 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LGK + + E+F+ M + + ++ L+S G+ G A L MKN+ C+
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS-GCR 165
Query: 61 PDVNTYSILIKSCL----KAFAFDKVQALLSDMSTQGI---RPNTVTYNTLIDAYGRAKM 113
PD + Y+ LI + L KA A +KV+ L M +GI +PN VTYN L+ A+ ++
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGK 223
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
++ + PDV+T N + A+G +G I ME + +S +P I TFN+
Sbjct: 224 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+DSYGK FEKM + + + T+ T+N +I +G+A + + E++F+ M
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
PS +T ++ YG+ G + + + SD +L N +++ Y R + E
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 403
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ PD TY+ + +AY+ MK ++ Q L++KM++
Sbjct: 404 KLFHNASAFRVHPDASTYKFLYKAYTKADMK---EQVQILMKKMEK 446
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L G+S + + + M+ PD YS LI K L S+M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 93 GIRPNTVTYNTLIDAY----GRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
G RP+ YN LI A+ +AK ++ L KM E C+P+V T N LRAF SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + ++ + + P + TFN ++D+YGK G ++M AV+ M+ I+T+N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 208 IVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++ID++G+ + ++ME F+ LMRS+ KP+ T S++ YG A +K V + +++
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + + C++ YG + + + E + + T M+ Y NG+
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC + + AL++A+ ++ +K L+ MK
Sbjct: 142 VMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGI 201
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSD---------------------------- 88
CQP+V TY+IL+++ ++ D+V AL D
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 89 -------MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
M + +P+ +T+N LID+YG+ + F +ME T ++ +P + T N +
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+G + ID E ++K PS T+ ++ YG G + + E + +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T N +++ + R G + + LF + R+ P T L +AY A E++ ++
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILM 441
Query: 262 RFIDNSDIMLDTVFFNCLVDAYG 284
+ ++ I+ + FF ++ +G
Sbjct: 442 KKMEKDGIVPNKRFFLEALEVFG 464
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDC 59
+L + ++ ++ LF+ M EG N ++ +L YG+ G +D+ SL + MK+ +
Sbjct: 222 ILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL-EI 280
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD TY+ +I +C++ + L +M G PN VTYN L+D YG+ M E
Sbjct: 281 SPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASE 340
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+M + P++ T N + A+ +G D + S G+ P T+ L+ ++
Sbjct: 341 LLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFN 400
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A +EK M+K + + IVTYNI+ID +GR L M +F+ M+ + P V
Sbjct: 401 RAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLV 460
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL++++G+ G ++ +V R + + M FN L++ YGR + + +
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGL 520
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G +P T+ ++ + + G
Sbjct: 521 LRTGLQPTVPTFAALMASLAREG 543
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 2/324 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTA-LLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LG+ + +KA E+F+ + C TA +LS G A L E +K
Sbjct: 151 LGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYS 210
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMEL 119
DV Y+ LI +A FD+ L M +G R N VTYN ++D YG R + ++
Sbjct: 211 LDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQS 270
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + PD +T N + A + + +++ + AG P+ T+N LLD YG
Sbjct: 271 LFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYG 330
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ S ++ M+ S IVTYN +I A+ RAG + L + + S+ + P
Sbjct: 331 KGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEF 390
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T C+L+ A+ A + EK + ++ + V +N L+D YGR++ +M V + M
Sbjct: 391 TYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFM 450
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGM 323
Q++ C PD VT+ ++++++ GM
Sbjct: 451 QEKNCTPDLVTWNSLLKSFGNCGM 474
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 163/321 (50%), Gaps = 2/321 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LFQ M + GC N ++ ALL YG+ G+ +A LL M+ P++ TY+
Sbjct: 301 QEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEME-AAGISPNIVTYNE 359
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + +A D+ AL + ++G+ P+ TY TLI A+ RA+ + + T +M +
Sbjct: 360 LIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTN 419
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P++ T N + +G ++D M K ++ Q P + T+N LL S+G G ++S
Sbjct: 420 CTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVS 479
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M++ Y + T+NI+I+ +GR G + +++ + ++P+ T +L+ +
Sbjct: 480 NVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASL 539
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP-D 307
G+ ++ V + + + + L L+ +Y F +++ ++ +++ +P
Sbjct: 540 AREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLS 599
Query: 308 KVTYRTMVRAYSTNGMKNHAK 328
+ +T V AY GM N A+
Sbjct: 600 GILCKTFVLAYCKCGMDNEAQ 620
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 173/383 (45%), Gaps = 43/383 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++A EL M G N ++ L++AY R+GL D+A +L + + + C PD
Sbjct: 330 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLC-PD 388
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI + +A ++K ++M PN VTYN LID YGR + +M
Sbjct: 389 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M ++C PD+ T N L++FGN G + + + + + AG P ++TFNIL++ YG+ G
Sbjct: 449 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 508
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + + + + T+ T+ ++ + R G +Q E + + M ++ S
Sbjct: 509 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 568
Query: 243 SLVRAYGHAGK---------------PEKLGSVL--RFI---------DNSDIMLDTVF- 275
L+ +Y ++G+ + L +L F+ + + + L+ ++
Sbjct: 569 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYD 628
Query: 276 ---------FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
FN ++ + +LE +++ KPD VTY ++ Y GM
Sbjct: 629 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYK 688
Query: 327 AKEFQDLVEKMDETCLAMKRPDF 349
A+E M E A K P+
Sbjct: 689 AEEV------MSEMRRAGKAPNL 705
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 146/332 (43%), Gaps = 2/332 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G C + +F+ M G +F L+ YGR G D + + + + T QP
Sbjct: 469 FGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRT-GLQP 527
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V T++ L+ S + + + + + +M+ G++ + + LI +Y + F ++ +
Sbjct: 528 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 587
Query: 122 VKMLSEDCEPDVWTMNCT-LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ +P + T + A+ G + + + G P I FN ++ K
Sbjct: 588 DELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAK 647
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ ++E ++K VTYN ++ +GR G + E + MR P+ +T
Sbjct: 648 RGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLIT 707
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ +Y G+ + V + + + D FN LV +Y L + E V+E M
Sbjct: 708 YNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 767
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ GC+P ++T++ ++ Y+ N + K D
Sbjct: 768 EHGCQPTQITFKALLDGYNRNASPSRKKPGGD 799
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 43/200 (21%)
Query: 140 LRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L GN Q+ + +E Q + + L+ +A F++ + E MQ+
Sbjct: 184 LSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREG 243
Query: 199 YSWTIVTYNIVIDAFGRAGD-LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
VTYN+++D +G+ GD +++ LF+ M+ I P
Sbjct: 244 QRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPD-------------------- 283
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGR--LKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
D +T+ C+ +++ + L+ F EMK + GC P++VTY ++
Sbjct: 284 ----------DYTYNTMITACIQNSHCQEALRLFQEMK-------EAGCCPNRVTYNALL 326
Query: 316 RAYSTNGMKNHAKEFQDLVE 335
Y GM A E LVE
Sbjct: 327 DVYGKGGMHKEASEL--LVE 344
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 14/346 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LGK + + E+F+ M + + ++ L+S G+ G A L MKN+ C+
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS-GCR 165
Query: 61 PDVNTYSILIKSCL----KAFAFDKVQALLSDMSTQGI---RPNTVTYNTLIDAYGRAKM 113
PD + Y+ LI + L KA A +KV+ L M +GI +PN VTYN L+ A+ ++
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGK 223
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
++ + PDV+T N + A+G +G I ME + +S +P I TFN+
Sbjct: 224 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+DSYGK FEKM + + + T+ T+N +I +G+A + + E++F+ M
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
PS +T ++ YG+ G + + + SD +L N +++ Y R + E
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 403
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ PD TY+ + +AY+ MK ++ Q L++KM++
Sbjct: 404 KLFHNASAFRVHPDASTYKFLYKAYTKADMK---EQVQILMKKMEK 446
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L G+S + + + M+ PD YS LI K L S+M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 93 GIRPNTVTYNTLIDAY----GRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
G RP+ YN LI A+ +AK ++ L KM E C+P+V T N LRAF SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + ++ + + P + TFN ++D+YGK G ++M AV+ M+ I+T+N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 208 IVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++ID++G+ + ++ME F+ LMRS+ KP+ T S++ YG A +K V + +++
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + + C++ YG + + + E + + T M+ Y NG+
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC + + AL++A+ ++ +K L+ MK
Sbjct: 142 VMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGI 201
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSD---------------------------- 88
CQP+V TY+IL+++ ++ D+V AL D
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 89 -------MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
M + +P+ +T+N LID+YG+ + F +ME T ++ +P + T N +
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+G + ID E ++K PS T+ ++ YG G + + E + +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T N +++ + R G + + LF + R+ P T L +AY A E++ ++
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILM 441
Query: 262 RFIDNSDIMLDTVFFNCLVDAYG 284
+ ++ I+ + FF ++ +G
Sbjct: 442 KKMEKDGIVPNKRFFLEALEVFG 464
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 160/340 (47%), Gaps = 4/340 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK ++P++A ++ Q M G + ++ +L+SAY + GL ++A L M + +
Sbjct: 308 VFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHK-GIK 366
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ L+ KA D + +M G +PN T+N LI +G FAEM
Sbjct: 367 PDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKV 426
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +C PD+ T N L FG +G + +++ + AG +TFN L+ +Y +
Sbjct: 427 FDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSR 486
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F++ AV + M + + TYN V+ A R G +Q E + M R KP+ ++
Sbjct: 487 CGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELS 546
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ AY + + E++ + I + + V LV + E + ++
Sbjct: 547 YSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELR 606
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+RG PD T M+ Y G K + +++ M ET
Sbjct: 607 RRGISPDITTLNAMLSIY---GRKQMVAKAHEILNFMHET 643
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 164/338 (48%), Gaps = 1/338 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ + +F+ M G A +F L+SAY R G FD+A ++ + M
Sbjct: 448 VFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEA-GVV 506
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD++TY+ ++ + + +++ + +L++M +PN ++Y++L+ AY K M
Sbjct: 507 PDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAF 566
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ S E + + S + E+ + + + GI P I T N +L YG+
Sbjct: 567 AEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGR 626
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
K ++ +M + ++ ++ TYN ++ + R+ + ++ E + R + + +KP ++
Sbjct: 627 KQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRIS 686
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ AY G+ ++ + + +S ++ D V +N + Y FAE V+ M
Sbjct: 687 YNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMI 746
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
++GCKPD+ TY ++V Y ++ A F + +D
Sbjct: 747 KQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSNLD 784
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 38/348 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A LF M +GC+ ++ +L+ YG+ G+ + +L+E M++ PD+ TY+ L
Sbjct: 212 AVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSR-GVAPDLYTYNTL 270
Query: 70 IKSC-----------------LKAFAFDKVQ------------------ALLSDMSTQGI 94
I C L+ F DKV +L +M G
Sbjct: 271 ISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGF 330
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
P +VTYN+LI AY + + E +M+ + +PDV+T L F +G+ D +
Sbjct: 331 SPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQ 390
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + ++ G +P+I TFN L+ +G G F +M V + ++ + S IVT+N ++ FG
Sbjct: 391 VFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFG 450
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G Q+ +F+ M+ T +L+ AY G ++ +V + + + ++ D
Sbjct: 451 QNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLS 510
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N ++ A R + + + VL M+ CKP++++Y +++ AY+ NG
Sbjct: 511 TYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA-NG 557
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + A L A+ ++G + ++T L++AY SG + A +L M+ C
Sbjct: 167 ILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD-GCN 225
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K + V AL+ M ++G+ P+ TYNTLI R ++ E
Sbjct: 226 PTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVH 285
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M E PD T N L FG S + K ++ ++ G P+ T+N L+ +Y
Sbjct: 286 LFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYA 345
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G E+ + M + TY ++ F +AG +F MR+ KP+
Sbjct: 346 KGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNIC 405
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ +G+ GK ++ V I + D V +N L+ +G+ +++ G+ + M
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEM 465
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
++ G ++ T+ T++ AYS G
Sbjct: 466 KRAGFVAERDTFNTLISAYSRCG 488
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKMSAV 190
DV+ C + A+ +SG+ + K Q G P++ T+N++L+ YGK G + ++A+
Sbjct: 192 DVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTAL 251
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M+ + + TYN +I R ++ +LF+ M+ E P VT +L+ +G
Sbjct: 252 VEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGK 311
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ +P++ VL+ ++ + +V +N L+ AY + E + M +G KPD T
Sbjct: 312 SRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFT 371
Query: 311 YRTMVRAYSTNGMKNHA 327
Y T++ + G + A
Sbjct: 372 YTTLLSGFEKAGKDDFA 388
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 40/331 (12%)
Query: 32 ALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS---ILIKSCLKAFAFDKVQALLSD 88
++ A G S D A ++ H T + ++ + S ++IK KA +LL
Sbjct: 125 GIIKALGFSNKCDLALAVF-HWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLA 183
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG- 147
+ G+ + Y LI+AY + + + KM + C P + T N L +G G
Sbjct: 184 LQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGM 243
Query: 148 ----------------------QIDTMEKC-------------YEKFQSAGIQPSINTFN 172
+T+ C +++ + G P T+N
Sbjct: 244 PWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYN 303
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LLD +GK+ ++ V++ M+ +S T VTYN +I A+ + G L++ L M +
Sbjct: 304 ALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHK 363
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
IKP T +L+ + AGK + V + + FN L+ +G FAEM
Sbjct: 364 GIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEM 423
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
V + ++ C PD VT+ T++ + NGM
Sbjct: 424 MKVFDDIKLCNCSPDIVTWNTLLAVFGQNGM 454
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 1/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +P++A ++ M G + ++ +L+SAY R G+ D+A L M +PD
Sbjct: 325 GKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK-GTKPD 383
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ +A + + +M G +PN T+N I YG F +M
Sbjct: 384 VFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFD 443
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ PD+ T N L FG +G + +++ + AG P TFN L+ +Y + G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
FE+ V M + + TYN V+ A R G +Q E + M R KP+ +T C
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + + S+ + + I V LV + E + +++R
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD T +MV Y M A E D +++
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKE 657
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK + A LF + ++G + S+T+L+SA+ SG + +A ++ + M+ C+
Sbjct: 182 MLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE-GCK 240
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++K+ +L+ M + GI P+ TYNTLI R + E
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + D T N L +G S + K + + G PSI T+N L+ +Y
Sbjct: 301 VFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYA 360
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G ++ + M + + TY ++ F RAG ++ +F MR+ KP+
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNIC 420
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + ++ YG+ GK + + I+ + D V +N L+ +G+ +E+ GV + M
Sbjct: 421 TFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
++ G P++ T+ T++ AYS G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCG 503
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 38/349 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A +F+ M +EGC ++ +L+ +G+ G ++K SL+E MK + PD TY+
Sbjct: 226 EAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK-SDGIAPDAYTYNT 284
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMEL-- 119
LI C + + + +M G + VTYN L+D YG++ K+ EMEL
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNG 344
Query: 120 ---------TLVK------MLSEDCE-----------PDVWTMNCTLRAFGNSGQIDTME 153
+L+ ML E E PDV+T L F +G++++
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+E+ ++AG +P+I TFN + YG G F M + + + S IVT+N ++ F
Sbjct: 405 NIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
G+ G ++ +F+ M+ P T +L+ AY G E+ +V R + ++ + D
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N ++ A R + + + VL M+ CKP+++TY +++ AY+ NG
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NG 572
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 159/325 (48%), Gaps = 1/325 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++F L+SAY R G F++A ++ M + PD++TY+ ++ +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAAL 534
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + +L++M +PN +TY +L+ AY K M ++ S EP
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E+ + + + G P I T N ++ YG+ K + V++Y
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDY 654
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ ++ ++ TYN ++ R+ D + E + R + ++ IKP ++ +++ AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ + +S I+ D + +N + +Y F E GV+ M + GC+P++ TY +
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMD 338
+V Y K+ AK F + + +D
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNLD 799
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G G++ + + Q G + ++ L+ ++ +G + + V + M++ T
Sbjct: 183 LGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPT 242
Query: 203 IVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
++TYN++++ FG+ G ++ L M+S+ I P T +L+ ++ V
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + D V +N L+D YG+ E VL M+ G P VTY +++ AY+ +
Sbjct: 303 EEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARD 362
Query: 322 GMKNHAKEFQD 332
GM + A E ++
Sbjct: 363 GMLDEAMELKN 373
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I++ GK G + + +Q+ +S + +Y +I AF +G ++ +F+ M E
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 233 RIKPSCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
KP+ +T ++ +G G P K+ S++ + + I D +N L+ R E
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
V E M+ G DKVTY ++ Y G + KE ++ +M+
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVY---GKSHRPKEAMKVLNEME 341
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 10/344 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LGK + + E+F+ M + + ++ L+S G+ G A L MKN+ C+
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS-GCR 165
Query: 61 PDVNTYSILIKSCL----KAFAFDKVQALLSDMS-TQGIRPNTVTYNTLIDAYGRAKMFA 115
PD + Y+ LI + L KA A +KV+ M + +PN VTYN L+ A+ ++
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVD 225
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
++ + PDV+T N + A+G +G I ME + +S +P I TFN+L+
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
DSYGK FEKM + + + T+ T+N +I +G+A + + E++F+ M
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYM 345
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
PS +T ++ YG+ G + + + +S+ +L N +++ Y R + E +
Sbjct: 346 PSFITYECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADKL 405
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
PD TY+ + +AY+ MK H Q L++KM++
Sbjct: 406 FHNASAFRVHPDASTYKFLYKAYTKADMKEHV---QILMKKMEK 446
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 4 KCKQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K K EK F M E C N ++ LL A+ +SG D+ +L + + +P PD
Sbjct: 184 KAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP-VSPD 242
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V T++ ++ + K +++A+L+ M + +P+ +T+N LID+YG+ + F +ME T
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ +P + T N + +G + ID E ++K PS T+ ++ YG G
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYMPSFITYECMIMMYGYCG 362
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + E + T N +++ + R G + + LF + R+ P T
Sbjct: 363 SVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADKLFHNASAFRVHPDASTYK 422
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDI 269
L +AY A E + +++ ++ I
Sbjct: 423 FLYKAYTKADMKEHVQILMKKMEKDGI 449
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G C +A E+F+ +VD + A+L Y R+GL+ +A L H +
Sbjct: 357 MYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADKLF-HNASAFRVH 415
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
PD +TY L K+ KA + VQ L+ M GI
Sbjct: 416 PDASTYKFLYKAYTKADMKEHVQILMKKMEKDGI 449
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 177/362 (48%), Gaps = 36/362 (9%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E F + G + T ++ ALL +G++G++ +A ++L+ M++ +C D TY+ L
Sbjct: 321 EAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDN-NCTLDSVTYNEL 379
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELT-- 120
+ + ++A +++ ++ M+ +G+ PN VTY T+I+AYGRA ++F +M+ +
Sbjct: 380 VAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGC 439
Query: 121 ----------------------LVKMLSE----DCEPDVWTMNCTLRAFGNSGQIDTMEK 154
++K+LS+ C P+ T N L G+ G+ +
Sbjct: 440 VPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNH 499
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + ++ G +P +TFN L+ +YG+ G + + + M K ++ TYN +++A
Sbjct: 500 VFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALA 559
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
R GD K E + MR++ KP+ + ++ Y G L + + I + I V
Sbjct: 560 RRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWV 619
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L+ A + + M+ E + + G KPD V + +M+ ++ N M A++ DL+
Sbjct: 620 LLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLI 679
Query: 335 EK 336
+
Sbjct: 680 RE 681
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDAN----TQSFTALLSAYGRSGLFDKAFSLLEHMKNT 56
+LGK E+A LF+ +V + +++ ++ GR + A LL+ +
Sbjct: 170 VLGKS---ERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIP-- 224
Query: 57 PDCQPDVNTYSILIKSC---LKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYG 109
++ YS+ +++C L A++ + + A+ M G+ P+ VTYN ++D YG
Sbjct: 225 ------IDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYG 278
Query: 110 RAKMFAEMELTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ + L L+ +M +E + D +T + + A G G I+ ++ + + +S+G +P
Sbjct: 279 KMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGT 338
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+N LL +GKAG + + +++ M+ + + VTYN ++ A+ RAG ++ +
Sbjct: 339 VTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDT 398
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M + + P+ VT +++ AYG AGK K + + S + + +N ++ G+
Sbjct: 399 MTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSR 458
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMV 315
EM +L M+ GC P+++T+ T++
Sbjct: 459 SEEMIKILSDMRINGCPPNRITWNTLL 485
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 5/321 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQP 61
GK KQ A +F+ M D G + ++ +L YG+ G +DK LL+ M+N Q
Sbjct: 246 GKYKQ---AIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNE-GLQF 301
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T S +I +C + ++ + ++ + G P TVTYN L+ +G+A +++E L
Sbjct: 302 DEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 361
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M +C D T N + A+ +G + + G+ P+ T+ ++++YG+A
Sbjct: 362 KEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRA 421
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K + M+K + TYN ++ G+ ++M + MR P+ +T
Sbjct: 422 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 481
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ G GK + + V R + N FN L+ AYGR + + + M +
Sbjct: 482 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMK 541
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G P TY ++ A + G
Sbjct: 542 AGFTPCATTYNALLNALARRG 562
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+ +F+ M + G + +F L+SAYGR G D A E MK P TY+ L
Sbjct: 497 VNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMK--AGFTPCATTYNAL 554
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + + + +++L DM +G +PN +++ ++ Y + +E +
Sbjct: 555 LNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQI 614
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P + + A + ME+ +E+ G +P + FN +L + K +E+
Sbjct: 615 FPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQK 674
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ +++ +VTYN +++ + R G+ + E + + + P V+ ++++ +
Sbjct: 675 MLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFC 734
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++ V+ + I +N V Y FAE+ V+ M Q+ CKP+++
Sbjct: 735 RQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNEL 794
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVE 335
TY+ +V Y A+++QD ++
Sbjct: 795 TYKIIVDGYC------KARKYQDAMD 814
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 133/255 (52%), Gaps = 1/255 (0%)
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ ++S+ + ++ ++ +I GR ++ L K+ + DV L A
Sbjct: 182 EWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHA 241
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYSW 201
+ +G+ +E+ + G+ PS+ T+N++LD YGK G ++K+ +++ M+ +
Sbjct: 242 YSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 301
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T + VI A GR G + + + F ++S +P VT +L++ +G AG + ++L
Sbjct: 302 DEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 361
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ +++++ LD+V +N LV AY R + E V++ M ++G P+ VTY T++ AY
Sbjct: 362 KEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRA 421
Query: 322 GMKNHAKEFQDLVEK 336
G + A + + ++K
Sbjct: 422 GKEVKALQLFNQMKK 436
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 1/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + E+ ++ M GC N ++ LL+ G G + MKN +
Sbjct: 452 LLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNC-GFE 510
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +T++ LI + + + + +M G P TYN L++A R + E
Sbjct: 511 PGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESV 570
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L+ M ++ +P+ + + L + G + +E+ + I PS L+ + K
Sbjct: 571 LLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFK 630
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
M E + K Y +V +N ++ F + ++ + + L+R ++P VT
Sbjct: 631 CRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVT 690
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ Y G+ K +L+ + S D V +N ++ + R E V+ M
Sbjct: 691 YNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMT 750
Query: 301 QRGCKPDKVTYRTMVRAYSTNGM 323
RG P TY T V Y+ GM
Sbjct: 751 TRGICPCIFTYNTFVSGYAGRGM 773
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 119/306 (38%), Gaps = 36/306 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C A +++ M+ G ++ ALL+A R G + A S+L M+N +P+
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNK-GFKPN 582
Query: 63 VNTYSI-----------------------------------LIKSCLKAFAFDKVQALLS 87
++S+ LI + K A ++
Sbjct: 583 ETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFE 642
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
++ G +P+ V +N+++ + + M+ + L + +PD+ T N + + G
Sbjct: 643 ELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRG 702
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ E+ + +G P + ++N ++ + + G ++ VM M I TYN
Sbjct: 703 ECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYN 762
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ + G +++ + M + KP+ +T +V Y A K + + I N
Sbjct: 763 TFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKNI 822
Query: 268 DIMLDT 273
D D
Sbjct: 823 DDSFDN 828
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M + N+ ++ +L++Y G + K+F +L+ MK+ QPD + Y++
Sbjct: 379 ESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN-GVQPDRHFYNV 437
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K D A M ++GIRP+TVT+NTLI+ + GR M E+ +M
Sbjct: 438 MIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEEL---FGEMQ 494
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P + T N + + G + + + K QS G+ P+ T+ L+D YGK+G F
Sbjct: 495 QRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFS 554
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+E ++ + T YN +I+A+ + G + FRLM +E + PS + L SL+
Sbjct: 555 DAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLI 614
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + +VL+++ ++I D V + L+ A R++ F ++ V E M GC
Sbjct: 615 NAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCT 674
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 675 PDRKA-RAMLRS 685
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 149/300 (49%), Gaps = 1/300 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G + Q+++ L+ AY +G ++ A +L+ M+ + + +P+ YS ++ S
Sbjct: 353 MEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS-NVEPNSYVYSRILASYRDKG 411
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ K +L DM + G++P+ YN +ID +G+ T +MLSE PD T N
Sbjct: 412 EWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWN 471
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ SG+ + E+ + + Q G P I T+NI+++S G+ +E++S + MQ
Sbjct: 472 TLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQ 531
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+TY ++D +G++G +++S KP+ +L+ AY G E
Sbjct: 532 GLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELA 591
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ R + + + N L++A+G + AE VL+ M++ +PD VTY T+++A
Sbjct: 592 VNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKA 651
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 152/326 (46%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P +A G + + A++ A G SG +A +L E ++ +P
Sbjct: 267 FSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN-GSEP 325
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +K + + ++S+M G++P+ TY+ LIDAY A + + L
Sbjct: 326 RTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVL 385
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + EP+ + + L ++ + G+ + + +S G+QP + +N+++D++GK
Sbjct: 386 KEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKY 445
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ A E M VT+N +I+ ++G E LF M+ P T
Sbjct: 446 NCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTY 505
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ + G + E++ L + + ++ +++ + LVD YG+ F++ LEV++
Sbjct: 506 NIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 565
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 566 TGFKPTSTMYNALINAYAQRGLSELA 591
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
++ + EK +E F ++ + ++ AL+ A R+G +KA +L+ M+ Q
Sbjct: 161 LINALGRSEKLYEAF--LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRD-GYQ 217
Query: 61 PDVNTYSILIKSCLKAFAFDK--VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD YS +I+ ++ D +Q L +++ T I + N +I + +A
Sbjct: 218 PDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAM 277
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L S P T+ + A GNSG+ E +E+ + G +P +N LL Y
Sbjct: 278 RFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGY 337
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + V+ M+K TY+++IDA+ AG + + + M + ++P+
Sbjct: 338 VKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNS 397
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ +Y G+ +K VL+ + ++ + D F+N ++D +G+ C E
Sbjct: 398 YVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFER 457
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETCL 342
M G +PD VT+ T++ + +G N A+E F ++ ++ C+
Sbjct: 458 MLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCI 502
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 135/303 (44%), Gaps = 7/303 (2%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++ + ++G +A L M + P +T +I + + + +AL ++
Sbjct: 263 IILGFSKAGDPTRAMRFLA-MAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN 321
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P T YN L+ Y + + E + +M +PD T + + A+ ++G+ ++
Sbjct: 322 GSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESA 381
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
++ +++ ++P+ ++ +L SY G ++K V++ M+ YN++ID
Sbjct: 382 RIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDT 441
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
FG+ L F M SE I+P VT +L+ + +G+ + +
Sbjct: 442 FGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPC 501
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N ++++ G + + ++ L MQ +G P+ +TY T+V Y +G F D
Sbjct: 502 ITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSG------RFSD 555
Query: 333 LVE 335
+E
Sbjct: 556 AIE 558
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 149/316 (47%), Gaps = 10/316 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYS 67
E +HEL CD T +T ++S G +A L+ M++ DC +V+TYS
Sbjct: 265 EPSHEL-----SSLCDLYT--YTTMISQCGSHQQLRRALELVAEMRSRGIDC--NVHTYS 315
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+ C+KA D Q + M +G PN VTYN LID Y + + E L + +
Sbjct: 316 ALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQ 375
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ +V T N + A SGQ + K YEK +AG++PS T+ L+ +YGK G EK
Sbjct: 376 AIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKA 435
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + ++TY+ +I A +AG + LF M E KP+ VT SL+ A
Sbjct: 436 LEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAA 495
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
H G EK + + D++ + L+ AY R + E MQ +GC PD
Sbjct: 496 CSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPD 555
Query: 308 KVTYRTMVRAYSTNGM 323
+ +++ +G+
Sbjct: 556 AAVFNSLMEVLWQSGV 571
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K QPE+A ++++ M+ G + ++TAL+SAYG+ G +KA + M C+ +V
Sbjct: 393 KSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRR-GCERNV 451
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS LI +C KA ++ L S M + +PN VT+N+LI A + + +
Sbjct: 452 ITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQ 511
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ C+PD T + A+ GQ K +E+ Q+ G P FN L++ ++G
Sbjct: 512 MQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGV 571
Query: 184 FEKMSAVME 192
S ++
Sbjct: 572 LLAQSKALQ 580
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q EKA E+F+ M+ GC+ N ++++L+SA ++G ++ A L M + +C+P+
Sbjct: 427 GKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKM-HKENCKPN 485
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V T++ LI +C ++K L M TQG +P+++TY LI AY R +
Sbjct: 486 VVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFE 545
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
+M ++ C PD N + SG + K +
Sbjct: 546 QMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQ 580
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E+A ++ + + A +++ ++SA +SG ++A + E M +P TY
Sbjct: 361 QWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKML-AAGVKPSATTY 419
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KML 125
+ LI + K +K + DM +G N +TY++LI A +A + EM L L KM
Sbjct: 420 TALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRW-EMALELFSKMH 478
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E+C+P+V T N + A + G + + +E+ Q+ G +P T+ L+ +Y + G +
Sbjct: 479 KENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWR 538
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ E MQ +N +++ ++G L
Sbjct: 539 RALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVL 572
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D++T + G+ Q+ + + +S GI +++T++ L++ KA + V
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334
Query: 192 EYMQKYHYSWTIVTYNIVIDAF-----------------------------------GRA 216
+ M + S +VTYNI+ID + ++
Sbjct: 335 KQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKS 394
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G +Q ++ M + +KPS T +L+ AYG G+ EK + R + + + +
Sbjct: 395 GQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITY 454
Query: 277 NCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ L+ A GR + E+ M + CKP+ VT+ +++ A S G H ++ +L
Sbjct: 455 SSLISACEKAGRWEMALEL---FSKMHKENCKPNVVTFNSLIAACSHGG---HWEKASEL 508
Query: 334 VEKM 337
E+M
Sbjct: 509 FEQM 512
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q A E+F + + + + A++ Y RSG F+K L + M+ C+
Sbjct: 231 VLGKANQEPLAVEVF-TRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRER-GCE 288
Query: 61 PDVNTYSILIKSCLKAFAFDKVQA--LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ +++ LI + LKA A LL+++ G+RP+ +TYNTLI A RA E
Sbjct: 289 PDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAV 348
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M++ CEPD+WT N + +G G E+ + +S G P ++N L ++
Sbjct: 349 NVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAF 408
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G+ EK+ + E M K + +TYN +I +G+ G L+R M+S P
Sbjct: 409 AREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDV 468
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T L+ + G K E+ ++ + N+ + ++ L+ Y + E + +
Sbjct: 469 ITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDC 528
Query: 299 MQQRGCKPDKVTYRTMV 315
M + G +PD++ Y M+
Sbjct: 529 MLRSGTRPDQLAYSVML 545
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 6/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLF--DKAFSLLEHMKNTPDCQPDVNTYS 67
K ELF M + GC+ + SF L++A ++G + A LL ++ + +PD+ TY+
Sbjct: 274 KVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRS-GLRPDIITYN 332
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C +A ++ + DM P+ TYN +I YGR + + E + S
Sbjct: 333 TLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESR 392
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD + N L AF G ++ ++ E+ G T+N ++ YGK G +
Sbjct: 393 GFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLA 452
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ + ++TY ++ID+ G+ +++ + M + +KP+ T +L+
Sbjct: 453 LQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICG 512
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGKP + + S D + ++ ++D + R + M G P+
Sbjct: 513 YAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPE 572
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+R T G N ++ +V M+E C
Sbjct: 573 HSLYELMLR---TLGNANKVEDIGRVVRDMEEVC 603
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + KQ + M + G + + ++L Y F K + + +K +
Sbjct: 929 LLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKED-GLE 987
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +TY+ILI + + L+ +M T G+ P TY +L+ ++G+ ++ + E
Sbjct: 988 PDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEEL 1047
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ S C+ D + ++ + NSG ++ + + G++P+I T ++L+ SYG
Sbjct: 1048 FEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGS 1107
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G ++ V+ +++ + + + Y+ VIDA+ R GD + ++ E ++P
Sbjct: 1108 SGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRI 1167
Query: 241 LCSLVRA 247
+RA
Sbjct: 1168 WTCFIRA 1174
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 152/337 (45%), Gaps = 3/337 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQP 61
G+ K +KA + M N + + AL+ AY SG +++A ++ M K+ P P
Sbjct: 791 GRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGP--SP 848
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V++ + L+++ + +++ ++ ++ G + + + ++DA+ RA E++
Sbjct: 849 TVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIY 908
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + P + + Q+ +E + + AG +P ++ +N +L Y
Sbjct: 909 HGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAI 968
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F K + + + +++ TYNI+I + R K+ L MR+ ++P T
Sbjct: 969 DDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTY 1028
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SLV ++G E+ + + ++ LD F++ ++ Y ++ + + +M+
Sbjct: 1029 KSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKD 1088
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
G +P T ++ +Y ++G A++ +++ D
Sbjct: 1089 EGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETD 1125
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 135/317 (42%), Gaps = 36/317 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + + Q + D G + S +L A+ R+G + + MK P ++ Y +
Sbjct: 867 EELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMK-AAGYFPSMHLYRV 925
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ + + V+A+LS+M G +P+ +N+++ Y F + ++ +
Sbjct: 926 MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDG 985
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPD T N + + + ++ ++ G++P ++T+ L+ S+GK E+
Sbjct: 986 LEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAE 1045
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E +Q Y+I++ + +G + + LF +M+ E ++P+ T+ L+ +Y
Sbjct: 1046 ELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSY 1105
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G +G+P++ VL + +D L T+ ++ ++D
Sbjct: 1106 GSSGQPQEAEKVLSNLKETDANLSTLPYSSVID--------------------------- 1138
Query: 309 VTYRTMVRAYSTNGMKN 325
AY NG N
Sbjct: 1139 --------AYVRNGDYN 1147
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 148/337 (43%), Gaps = 3/337 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F M G A+ + +++ Y + G + A L++ + +++ Y +
Sbjct: 727 EASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDV 786
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I++ + + K +++ +M I N +N LI+AY + + M+ +
Sbjct: 787 IEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGP 846
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V ++N L+A G+++ + ++ Q G + S ++ ++LD++ +AG+ ++
Sbjct: 847 SPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKK 906
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M+ Y ++ Y ++ R ++ +E + M KP S+++ Y
Sbjct: 907 IYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYV 966
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
K + + I + D +N L+ Y R E +++ M+ G +P
Sbjct: 967 AIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLD 1026
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
TY+++V ++ + A+E L E++ T + R
Sbjct: 1027 TYKSLVASFGKQQLVEQAEE---LFEELQSTGCKLDR 1060
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD++ ++ ++K + F K + + G+ P+ TYN LI Y R E +
Sbjct: 952 KPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLV 1011
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +M + EP + T + +FG ++ E+ +E+ QS G + + ++I++ Y
Sbjct: 1012 LMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYR 1071
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G K + M+ TI T ++++ ++G +G
Sbjct: 1072 NSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSG---------------------- 1109
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+P++ VL + +D L T+ ++ ++DAY R + L+ +
Sbjct: 1110 -------------QPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQV 1156
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
++ G +PD + +RA S + H E L+ + +T
Sbjct: 1157 KEEGLEPDHRIWTCFIRAAS---LSQHTSEAILLLNALRDT 1194
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 116/284 (40%), Gaps = 40/284 (14%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ LI+ CL+ F + + SDM GI+ + Y +++ Y + F E L+ +
Sbjct: 712 FEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMG-FPETAHHLIDL- 769
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E D +N +I+ + ++++YG+ ++
Sbjct: 770 ---TETDGTVLN-----------------------------NISVYVDVIEAYGRLKLWQ 797
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K +V M++ + +N +I+A+ +G ++ +F M + P+ ++ L+
Sbjct: 798 KAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLL 857
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+A G+ E+L V++ + + + ++DA+ R E+K + M+ G
Sbjct: 858 QALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYF 917
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P YR M + + K+ +D+ + E A +PD
Sbjct: 918 PSMHLYRVMAQ------LLCRGKQVRDVEAMLSEMEEAGFKPDL 955
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV-FFNCLVDAYGRLKCFAEMKG 294
P+ L +++ G A + E L +V F + +TV +N ++ Y R F +++
Sbjct: 220 PNARMLSTILAVLGKANQ-EPL-AVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQE 277
Query: 295 VLEVMQQRGCKPDKVTYRTMVRA 317
+ ++M++RGC+PD V++ T++ A
Sbjct: 278 LFDLMRERGCEPDLVSFNTLINA 300
>gi|168039319|ref|XP_001772145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676476|gb|EDQ62958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 133/259 (51%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QP+ A +LF M G S+ AL+ +YGR+ KA L E+MK T DCQP
Sbjct: 27 GRINQPQLAADLFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTVDCQPT 86
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ LI + A ++++ + D + P+ TYN LI Y RA EME+T
Sbjct: 87 LVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFN 146
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ ++ DV T N + + + +D ME Q+ GI + + L+ +Y +AG
Sbjct: 147 ELQAKKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAG 206
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++++ ME ++ + TYNI+I +G+ G L +ME FR M + +KPS T
Sbjct: 207 TYDRLAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKPSFETFQ 266
Query: 243 SLVRAYGHAGKPEKLGSVL 261
++ AY A ++ +L
Sbjct: 267 YMINAYEAADNETQVDRIL 285
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLSEDCEPDVWTMN 137
L +M +GI+ V+YN LI +YGR ++F M++T+ DC+P + T N
Sbjct: 38 LFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTV------DCQPTLVTYN 91
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ + G + M+K + A P +T+N L+ Y +AG +M +Q
Sbjct: 92 TLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAK 151
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
++ ++TYN +I + RA + +ME + M++ I + + L +L+ AY AG ++L
Sbjct: 152 KFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRL 211
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + ++ ML +N L+ YG++ +M+ M KP T++ M+ A
Sbjct: 212 AKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKPSFETFQYMINA 271
Query: 318 YSTNGMKNHAKEFQDLVEK 336
Y + DL+ K
Sbjct: 272 YEAADNETQVDRILDLMRK 290
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 83/237 (35%), Gaps = 70/237 (29%)
Query: 3 GKCKQPEKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFD---KAFSLLEHMKNTPD 58
G+ +P+KA +LF+ M V C ++ L+S Y R G + K F + PD
Sbjct: 62 GRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPD 121
Query: 59 -------------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLS 87
DV TY+ LI +A A DK++ +LS
Sbjct: 122 RHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARANAVDKMEVVLS 181
Query: 88 DMSTQGIRPNTV-----------------------------------TYNTLIDAYGRAK 112
M GI NT+ TYN LI YG+
Sbjct: 182 SMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISEYGKVG 241
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
+ME +M++ +P T + A+ + +++ + + AG +P N
Sbjct: 242 YLDKMEQAFREMMNASVKPSFETFQYMINAYEAADNETQVDRILDLMRKAGCEPKSN 298
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y +I GR + LF M IK + V+ +L+ +YG +P+K + ++
Sbjct: 19 YAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMK 78
Query: 266 NS-DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ D V +N L+ Y R+ EMK + + PD+ TY ++ Y G
Sbjct: 79 VTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQL 138
Query: 325 NH 326
N
Sbjct: 139 NE 140
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 176/370 (47%), Gaps = 43/370 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+F+ M +EGC ++ +L+ YG+ G+ ++K L E MKN PD TY+ LI
Sbjct: 55 VFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNA-GILPDEYTYNTLITC 113
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP- 131
C + +++ A+ DM + G P+ VTYNTL+D YG+++ E L +M C P
Sbjct: 114 CRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPS 173
Query: 132 ----------------------------------DVWTMNCTLRAFGNSGQIDTMEKCYE 157
DV+T L F +G+ ++ + +E
Sbjct: 174 IVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFE 233
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ ++AG +P+I TFN L+ +G G F +M V E ++ IVT+N ++ FG+ G
Sbjct: 234 EMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNG 293
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ +F+ M+ P T +L+ AY G ++ ++ + + ++ I D +N
Sbjct: 294 MDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYN 353
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ A R + + + +L MQ CKP+++T+ +++ AY+ + KE ++
Sbjct: 354 AVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYA------NGKEIGRMLALA 407
Query: 338 DETCLAMKRP 347
+E C + P
Sbjct: 408 EEICSGVIEP 417
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 1/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ + M GC + ++ +L+SAY R GL ++A L M + D
Sbjct: 150 GKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVER-GIKLD 208
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ ++ + + +M T G +PN T+N LI +G FAEM
Sbjct: 209 VFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ C PD+ T N L FG +G + +++ + G P +T+N L+ +Y + G
Sbjct: 269 EIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCG 328
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ A+ + M + + TYN V+ A R G +Q E + M+ KP+ +T C
Sbjct: 329 SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHC 388
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + ++ ++ I + I V LV + E + ++++
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRK 448
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD T M+ Y M E + +++
Sbjct: 449 GFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKE 482
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 162/325 (49%), Gaps = 1/325 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ L+SAY R G FD+A ++ + M +T PD++TY+ ++ +
Sbjct: 301 VFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT-GITPDLSTYNAVLAAL 359
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + +L++M +PN +T+ +L+ AY K M ++ S EP
Sbjct: 360 ARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E+ + + + G P ++T N ++ YG+ K + ++ +
Sbjct: 420 VLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNF 479
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ ++ ++ TYN ++ ++ + ++ E + + + ++ IKP ++ +++ AY G+
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S ++ D + +N V +Y F E V+ M + GCKP++ TY +
Sbjct: 540 MKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNS 599
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMD 338
++ Y ++ A +F + ++D
Sbjct: 600 VIDGYCKLNRRDDAIKFISSLHELD 624
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 32 ALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMST 91
+++ G+ G A SLL ++ + +PDV Y+ LI +C+ + + + M
Sbjct: 3 VIINMLGKEGKVSVAASLLNNL-HKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 92 QGIRPNTVTYNTLIDAYGRAKM-FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+G +P +TYN +++ YG+ M + ++ M + PD +T N + +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+E +S G P T+N LLD YGK+ ++ V+ M+ S +IVTYN +I
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A+ R G L++ L M IK T +++ + GK E V + +
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ FN L+ +G FAEM V E ++ C PD VT+ T++ + NGM
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGM 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++++ GK G ++++ + K + + Y +I A G ++ +F+ M E
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 233 RIKPSCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
KP+ +T ++ YG G P K+ + + N+ I+ D +N L+ R + E
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
V E M+ G PDKVTY T++ Y G KE +++ +M+
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVY---GKSRRIKEAIEVLREME 166
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 162/330 (49%), Gaps = 4/330 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ A+ +S KA + MK
Sbjct: 131 VMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALVKALGYFDKMKGM 190
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP++ TY+IL+++C +A +V L D+ + P+ TYN +ID YG+ M E
Sbjct: 191 ERCQPNIVTYNILLRACARASDTKQVDILFKDLDESIVSPDIYTYNGVIDGYGKNGMITE 250
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S+ C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 251 MESVLVRMKSKQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMIT 310
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK +V+E MQ+ + VT +I+ + + + + +F + S +
Sbjct: 311 NYGKARLREKAESVIEKMQELGFKPNYVTQECLINMYAYCDCVSKAQQIFDELVSSQSTV 370
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+L +++ AY P + +L ++ + L AY R ++ +L
Sbjct: 371 PLSSLNAMLDAYCMNRLPMEADRLLDTAIEKGVVPSASTYKLLYRAYTRANDKMLVQKLL 430
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ M ++G P+K + + A+ T+ K+
Sbjct: 431 QRMNKQGIVPNKKFFLDALEAFGTSANKSR 460
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 11/308 (3%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR + + + M+ D YS LI + L S M
Sbjct: 92 LFEELGRRDGWVQCLEIFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS 151
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS--------EDCEPDVWTMNCTLRAFG 144
G +P+T YN+LI A+ ++ + LVK L E C+P++ T N LRA
Sbjct: 152 GCKPDTSVYNSLIGAHLHSR---DKSKALVKALGYFDKMKGMERCQPNIVTYNILLRACA 208
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ ++ ++ + + P I T+N ++D YGK G +M +V+ M+ ++
Sbjct: 209 RASDTKQVDILFKDLDESIVSPDIYTYNGVIDGYGKNGMITEMESVLVRMKSKQCRPDVI 268
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
T+NI+ID++GR +ME +F+ + + +P+ T S++ YG A EK SV+ +
Sbjct: 269 TFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKAESVIEKM 328
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ V CL++ Y C ++ + + + + + M+ AY N +
Sbjct: 329 QELGFKPNYVTQECLINMYAYCDCVSKAQQIFDELVSSQSTVPLSSLNAMLDAYCMNRLP 388
Query: 325 NHAKEFQD 332
A D
Sbjct: 389 MEADRLLD 396
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY------GKA-----GHFEKMS 188
+ G GQI + + +++G +P + +N L+ ++ KA G+F+KM
Sbjct: 129 ISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALVKALGYFDKMK 188
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
ME Q IVTYNI++ A RA D KQ++ LF+ + + P T ++ Y
Sbjct: 189 G-MERCQP-----NIVTYNILLRACARASDTKQVDILFKDLDESIVSPDIYTYNGVIDGY 242
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G ++ SVL + + D + FN L+D+YGR + F +M+ V + + + +P
Sbjct: 243 GKNGMITEMESVLVRMKSKQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTH 302
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ +M+ Y ++ A + ++EKM E
Sbjct: 303 PTFNSMITNYGKARLREKA---ESVIEKMQE 330
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 1/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ + M GC + ++ +L+SAY R GL +A L M D
Sbjct: 150 GKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEG-GINLD 208
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ ++A + + ++M G +PN T+N LI +G FAEM
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + C PD+ T N L FG +G + +++ + AG P +T+N L+ +Y + G
Sbjct: 269 EIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCG 328
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + + M + + + TYN V+ A R G +Q E +F M+ R KP+ +T C
Sbjct: 329 SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYC 388
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY + + ++ ++ I + I V LV + E + ++++
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRK 448
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD T M+ Y M E + + +
Sbjct: 449 GFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNE 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+F+ M +EGC ++ +L+ YG+ G+ ++K L E MKN PD TY+ LI
Sbjct: 55 VFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNA-GVLPDEYTYNTLITC 113
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP- 131
C + ++ A+ DM + G P+ VTYN L+D YG+++ E L +M C P
Sbjct: 114 CRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPS 173
Query: 132 ----------------------------------DVWTMNCTLRAFGNSGQIDTMEKCYE 157
DV+T L F +G+ ++ + +
Sbjct: 174 IVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFA 233
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ ++AG +P+I TFN L+ +G G F +M V E ++ IVT+N ++ FG+ G
Sbjct: 234 EMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNG 293
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ +F+ M+ P T +L+ AY G ++ + + + + I D +N
Sbjct: 294 MDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYN 353
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ A R + + + + M+ CKP+++TY +++ AY+ + KE ++
Sbjct: 354 AVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYA------NGKEIGRMLALA 407
Query: 338 DETCLAMKRP 347
+E C + P
Sbjct: 408 EEICSGVIEP 417
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ L+SAY R G FD+A + + M PD++TY+ ++ +
Sbjct: 301 VFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEA-GITPDLSTYNAVLAAL 359
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + + ++M +PN +TY +L+ AY K M ++ S EP
Sbjct: 360 ARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + E + + + G P ++T N +L YG+ F K + ++ +
Sbjct: 420 VLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNF 479
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + ++ ++ TYN ++ R+ + ++ E + + + ++ IKP ++ +++ AY G+
Sbjct: 480 MNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGR 539
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S ++ D + +N V +Y F + V+ M + GCKP++ TY +
Sbjct: 540 MKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNS 599
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMD 338
+V Y + ++ A F + ++D
Sbjct: 600 VVDGYCKHNHRDDAIMFISSLHELD 624
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++S G+ G A SLL + + DV Y+ LI +C+ + + + M +
Sbjct: 4 IISMLGKEGKVSVAASLLNDL-HKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 93 GIRPNTVTYNTLIDAYGRAKM-FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G +P +TYN +++ YG+ M + +++ M + PD +T N + +
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
++ +S G P T+N LLD YGK+ ++ V+ M+ S +IVTYN +I
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A+ R G LK+ L M I T +L+ + AGK E V + +
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ FN L+ +G FAEM V E ++ C PD VT+ T++ + NGM
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGM 294
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+++ GK G ++++ + K + + Y +I A G ++ +F+ M E
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 233 RIKPSCVTLCSLVRAYGHAGKP------------------------------------EK 256
KP+ +T ++ YG G P E+
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+V + + + + D V +N L+D YG+ + E VL M+ GC P VTY +++
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182
Query: 317 AYSTNGMKNHAKEFQD 332
AY+ +G+ A E ++
Sbjct: 183 AYARDGLLKEAMELKN 198
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +++ +V +GC + ++ L+ +GRSG D A + MK +PD TY
Sbjct: 82 ERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK-IKGSEPDEYTYGF 140
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-VKMLSE 127
L+ + KA + ++ M +G+ PN TYN L+DA+ + +M L L +M
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL-DMALGLFAEMKRR 199
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P V T N L A ++G++ K + K G P T++ L++ GK+G E+
Sbjct: 200 GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA 259
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V M + +V YN ++ +AG++ ++ L + M + P + +++ A
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G A KP+ V + S D + +N L+D+Y R A+ + +LE M + G P+
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TY +++ +T+G + A F L E C RPD
Sbjct: 380 TKTYNSLIHWLATDGQVDEA--FAVLEEMETAGC----RPD 414
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ Q + A E+F+ M +G + + ++ L++A G++G +A S + M P
Sbjct: 110 FGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER-GLTP 168
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY++L+ + K D L ++M +G +P+ VTYN L+DA A
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + C PD +T + + G SG+++ K + + G+ + +N LL + KA
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ +++ +M+ M + + ++N ++DA G+A +F M KP ++
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ +Y G + +L + + + +T +N L+ E VLE M+
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMET 408
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNH-AKEFQDLVEK 336
GC+PD VTY ++ G A+ FQ + +K
Sbjct: 409 AGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDK 444
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 16/330 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + MV EG + L++AYGR AF L ++ C P V+ ++ LI
Sbjct: 17 LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA-CSPTVHAFTKLIDIL 75
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLS 126
+ + F++ + + + +G + + YN LI +GR+ +MF EM++
Sbjct: 76 VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI------- 128
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ EPD +T + A G +G++ ++ G+ P+I T+N+L+D++ K G +
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M++ + ++VTYNI++DA AG + LF M + P T +LV
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G +G+ E+ V R + + + +D V +N L+ + + +++ M ++G P
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
D ++ T++ A + A+E F +VE
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVE 338
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 2/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + A +LF C +FT L+ SG F++A L+ CQ D
Sbjct: 41 GRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERA-ELVYKKLVQKGCQLD 99
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y++LI+ ++ D + +M +G P+ TY L++A G+A E
Sbjct: 100 RFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFD 159
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
ML P++ T N + AF GQ+D + + + G QPS+ T+NILLD+ AG
Sbjct: 160 AMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ M S TY+ +++ G++G +++ +FR M + V
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AG +++ +++ + D FN ++DA G+ + V M +
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
GCKPD ++Y ++ +Y+ G A++ +++VE
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 1/310 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A F AM++ G N ++ L+ A+ + G D A L MK QP
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRR-GFQP 203
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+IL+ + A + L M+ G P++ TY+TL++ G++ E
Sbjct: 204 SVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVF 263
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ D+ N L +G +D + K ++ G P +FN ++D+ GKA
Sbjct: 264 REMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ V M + +++YNI+ID++ R GD Q + M P T
Sbjct: 324 NKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTY 383
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ G+ ++ +VL ++ + D V +N L+D G+ + + M+
Sbjct: 384 NSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKD 443
Query: 302 RGCKPDKVTY 311
+G +PD ++Y
Sbjct: 444 KGVEPDTLSY 453
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 72/184 (39%), Gaps = 36/184 (19%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGR---------------------- 39
LGK +P+ A E+F MV+ GC + S+ L+ +Y R
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379
Query: 40 -------------SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
G D+AF++LE M+ T C+PDV TY+ L+ K + L
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEME-TAGCRPDVVTYNRLMDMLGKRGENQRAARLF 438
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +G+ P+T++Y ID E + M + C D +RA +
Sbjct: 439 QQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRA 498
Query: 147 GQID 150
G +
Sbjct: 499 GDTE 502
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 35/219 (15%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK-------------------------- 180
G +D +E ++ + G NT L+ +YG+
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 181 ---------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+G FE+ V + + + YN++I FGR+G L +FR M+
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ +P T LV A G AG+ ++ S + + + +N L+DA+ ++
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G+ M++RG +P VTY ++ A + G A++
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL 227
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK + ++A LFQ M D+G + +T S+ + D+A L + MK C
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAV-GCP 482
Query: 61 PDVNTYSILIKSCLKA 76
D Y ILI++ +A
Sbjct: 483 VDKAMYRILIRAAHRA 498
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 165/348 (47%), Gaps = 8/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E A +F+ + EG +F+AL+SAYG+SG FD+A + E MK +P
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK-VSGLKP 255
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F +V + +M G++P+ +TYN+L+ R ++
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + DV+T N L A GQ+D + + I P++ T++ + D Y K
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG E + M+ V+YN ++ + + G + + + M S +K VT
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG GK ++ V + + + + + ++ L+D Y + + E V +
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Q G K D V Y ++ A NG+ + A V +DE RP+
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSA------VLLLDEMTKEGIRPN 537
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 15/280 (5%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E+F+ M+ G + ++ +LL+ R GL++ A +L M + Q DV TY+ L+ +
Sbjct: 279 EIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQ-DVFTYNTLLDA 337
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKML 125
K D ++ +M + I PN VTY+T+ D Y +A ++ EM+ + +
Sbjct: 338 VCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL- 396
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
D + N L + G+ + K ++ S+G++ + T+N LLD YGK G F
Sbjct: 397 ------DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+++ V + M+K ++TY+ +ID + + ++ +FR + +K V L+
Sbjct: 451 EVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELI 510
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
A G + +L + I + V +N ++DA+GR
Sbjct: 511 NALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M+D G D + ++ LL A + G D A+ ++ M P+V TYS
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK-KILPNVVTYST 368
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ KA + L ++M GI + V+YNTL+ Y + F + +M S
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV T N L +G G+ + + + +++ + + P++ T++ L+D Y K +E+
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++ +V Y+ +I+A + G + L M E I+P+ VT S++ A+
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Query: 249 GHAGKPEKL 257
G + E L
Sbjct: 549 GRSTTAEFL 557
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ G G+++ + +E S G ++ F+ L+ +YGK+G+F++ V E M+
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGL 253
Query: 200 SWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VTYN VIDA G+ G + K++ +F M ++P +T SL+ G E
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAAR 313
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK---PDKVTYRTMV 315
++ + + I D +N L+DA + +M E+M + K P+ VTY TM
Sbjct: 314 NLFNEMIDRGIDQDVFTYNTLLDAVCK---GGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 316 RAYSTNG 322
Y+ G
Sbjct: 371 DGYAKAG 377
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 5/219 (2%)
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE-KFQSAGIQPSINTF-N 172
A ++ L+ S+ C + +T LR GN G+ +C++ G + +
Sbjct: 134 ASLDNILLNFESKLCGSEDYTF--LLRELGNRGECWKAIRCFDFALVREGRKNERGKLAS 191
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++ + G+ G E V E Y T+ ++ +I A+G++G + +F M+
Sbjct: 192 AMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVS 251
Query: 233 RIKPSCVTLCSLVRAYGHAG-KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+KP+ VT +++ A G G + +++ + + + + D + +N L+ R +
Sbjct: 252 GLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEA 311
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + M RG D TY T++ A G + A E
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEI 350
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 165/348 (47%), Gaps = 8/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E A +F+ + EG +F+AL+SAYG+SG FD+A + E MK +P
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK-VSGLKP 255
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F +V + +M G++P+ +TYN+L+ R ++
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + DV+T N L A GQ+D + + I P++ T++ + D Y K
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG E + M+ V+YN ++ + + G + + + M S +K VT
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG GK ++ V + + + + + ++ L+D Y + + E V +
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Q G K D V Y ++ A NG+ + A V +DE RP+
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSA------VLLLDEMTKEGIRPN 537
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 15/280 (5%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E+F+ M+ G + ++ +LL+ R GL++ A +L M + Q DV TY+ L+ +
Sbjct: 279 EIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQ-DVFTYNTLLDA 337
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKML 125
K D ++ +M + I PN VTY+T+ D Y +A ++ EM+ + +
Sbjct: 338 VCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL- 396
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
D + N L + G+ + K ++ S+G++ + T+N LLD YGK G F
Sbjct: 397 ------DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+++ V + M+K ++TY+ +ID + + ++ +FR + +K V L+
Sbjct: 451 EVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELI 510
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
A G + +L + I + V +N ++DA+GR
Sbjct: 511 NALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M+D G D + ++ LL A + G D A+ ++ M P+V TYS
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK-KILPNVVTYST 368
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ KA + L ++M GI + V+YNTL+ Y + F + +M S
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV T N L +G G+ + + + +++ + + P++ T++ L+D Y K +E+
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++ +V Y+ +I+A + G + L M E I+P+ VT S++ A+
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Query: 249 GHAGKPEKL 257
G + E L
Sbjct: 549 GRSTTAEFL 557
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ G G+++ + +E S G ++ F+ L+ +YGK+G+F++ V E M+
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGL 253
Query: 200 SWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VTYN VIDA G+ G + K++ +F M ++P +T SL+ G E
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAAR 313
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK---PDKVTYRTMV 315
++ + + I D +N L+DA + +M E+M + K P+ VTY TM
Sbjct: 314 NLFNEMIDRGIDQDVFTYNTLLDAVCK---GGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 316 RAYSTNG 322
Y+ G
Sbjct: 371 DGYAKAG 377
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 5/219 (2%)
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE-KFQSAGIQPSINTF-N 172
A ++ L+ S+ C + +T LR GN G+ +C++ G + +
Sbjct: 134 ASLDNILLNFESKLCGSEDYTF--LLRELGNRGECWKAIRCFDFALVREGRKNERGKLAS 191
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++ + G+ G E V E Y T+ ++ +I A+G++G + +F M+
Sbjct: 192 AMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVS 251
Query: 233 RIKPSCVTLCSLVRAYGHAG-KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+KP+ VT +++ A G G + +++ + + + + D + +N L+ R +
Sbjct: 252 GLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEA 311
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + M RG D TY T++ A G + A E
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEI 350
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++T ++S G +A L+ M++ DC +V+TYS L+ C+KA D Q +
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDC--NVHTYSALMNVCIKANELDLAQDVYK 59
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M +G PN VTYN LID + E V ++ + +V T N + A SG
Sbjct: 60 QMLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSG 119
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q + K YEK +AG++PS T+ L+ +YGK G EK + M + ++TY+
Sbjct: 120 QPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYS 179
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I A +AG + LF M E KP+ VT SL+ A H G EK + +
Sbjct: 180 SLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQ 239
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
D++ + L+ AY R + E MQ +GC PD + +++
Sbjct: 240 GCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K QPE+A ++++ M+ G + ++TAL+SAYG+ G +KA + M C+ +V
Sbjct: 117 KSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRR-GCERNV 175
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS LI +C KA ++ L S M + +PN VTYN+LI A + + +
Sbjct: 176 ITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQ 235
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M ++ C+PD T + A+ GQ K +E+ QS G P FN L+
Sbjct: 236 MQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q EKA ++F+ M+ GC+ N ++++L+SA ++G ++ A L M + +C+P+
Sbjct: 151 GKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKM-HKENCKPN 209
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +C ++K L M TQG +P+++TY LI AY R +
Sbjct: 210 VVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFE 269
Query: 123 KMLSEDCEPDVWTMN 137
+M S+ C PD N
Sbjct: 270 QMQSQGCHPDAAVFN 284
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 35/231 (15%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TY T+I G + + +M S + +V T + + + ++D + Y++
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
G P++ T+NIL+D + + + + + TYN VI A ++G
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+Q ++ M + +KPS T +L+ AYG G+ EK DI D
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKA---------LDIFRD------- 165
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M +RGC+ + +TY +++ A G A E
Sbjct: 166 -------------------MIRRGCERNVITYSSLISACEKAGRWEMALEL 197
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C ANT++FT +++ YG++ + + MK+ C+P
Sbjct: 57 LLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSI-GCKP 115
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 116 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 175
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + E +E+ + G+ P++ + +LL ++ ++
Sbjct: 176 SLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARS 235
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ + VM + K + N +++A+ RAG L ME LF M R T
Sbjct: 236 GNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAM-ERRGDADVGTY 294
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
V AYG AG ++ + + + D V + + AY R K + G++E M
Sbjct: 295 NVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVD 354
Query: 302 RGCKPDKVTYRTMVRAYS 319
GC PD T R ++ A S
Sbjct: 355 AGCYPDAGTARVLLAACS 372
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 2/306 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA 76
A+++ C ++ LL AY +G +A ++ M+ P+ Y+ + LKA
Sbjct: 2 ALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREH-GIPPNATVYNAYLDGLLKA 60
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
+K + M + R NT T+ +I+ YG+AK +M S C+P++ T
Sbjct: 61 RCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTY 120
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ AF G + E+ +E+ Q AG +P + +N L+++Y +AG + S + MQ
Sbjct: 121 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 180
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+YNI++DA+GRAG + E +F ++ + P+ + L+ A+ +G +
Sbjct: 181 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 240
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
V+ + S + DT N +++AY R +M+ + M++RG D TY V
Sbjct: 241 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVN 299
Query: 317 AYSTNG 322
AY G
Sbjct: 300 AYGRAG 305
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 35/278 (12%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P +TY++L+++ A + + + ++S+M GI PN YN +D +A+
Sbjct: 8 CVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKAR------ 61
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
CT +A + Y++ + + + TF ++++ Y
Sbjct: 62 -------------------CTEKAV----------EVYQRMKRERCRANTETFTLMINVY 92
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GKA V M+ I TY +++AF R G ++ E +F M+ +P
Sbjct: 93 GKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDV 152
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+L+ AY AG P+ + + + D +N LVDAYGR + + V E
Sbjct: 153 YAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE 212
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
++QRG P ++ ++ A++ +G +E + K
Sbjct: 213 LKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 250
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+L C P T LRA+ N+G + E + + GI P+ +N LD KA
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
EK V + M++ T+ ++I+ +G+A +F M+S KP+ T +
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV A+ G EK V + + D +N L++AY R + +MQ G
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
C+PD+ +Y +V AY G+ A+ F++L ++
Sbjct: 183 CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 216
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ +T+ +LL +Y AG + V+ M+++ YN +D +A ++ +
Sbjct: 10 PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEV 69
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++ M+ ER + + T ++ YG A +P V + + + + LV+A+ R
Sbjct: 70 YQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAR 129
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + V E MQQ G +PD Y ++ AYS G+ A E L++ M
Sbjct: 130 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 181
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK------------- 54
P+ A E+F M GC+ + S+ L+ AYGR+GL + A ++ E +K
Sbjct: 168 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHML 227
Query: 55 ---------NTPDCQ------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
N C+ PD + ++ + +A D ++ L + M +G
Sbjct: 228 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 287
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ TYN ++AYGRA ME + + DV T + A+ +
Sbjct: 288 -DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCV 346
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
E+ AG P T +LL + E+++A++ M K
Sbjct: 347 GMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 389
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 3/296 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA--FAFDKVQ 83
Q F A++ Y RSG FD A LL+ M++ D +PD+ +++ LI + K+ A
Sbjct: 60 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQ-DIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
LL ++ G+RP+ +TYNTLI A + + +M++ +C PD+WT N +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G G+ E +++ G QP T+N LL ++ K G E++ V E + K +
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+TYN +I +G+ G L L+ MR+ P VT LV + G + + G VL
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ + V F+ L+ AY + + + + M + G KPD++ Y M+ ++
Sbjct: 299 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 354
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL-LEHMKNTPDCQPDVNTYS 67
+ A +L AM D+ + + SF L++A +SG +L L H +PD TY+
Sbjct: 78 DDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYN 137
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + D A+ +M RP+ TYN ++ +GR E EL +++ +
Sbjct: 138 TLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK 197
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+PD T N L AF G ++ +E+ E+ AG + T+N ++ YGK G +
Sbjct: 198 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 257
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M+ + VTY +++D+ G+ + + + M +KP+ VT +L+ A
Sbjct: 258 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 317
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y +G+ + + S + D + + ++D + R ++ + M + G KPD
Sbjct: 318 YAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPD 377
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y+ ++ A + N E + +++ M+
Sbjct: 378 DGLYQVLLAALAKG---NEHDEIEGVIQDME 405
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F M+ +G +S ++ A G D+ + +++ +++ D + +T +
Sbjct: 639 EHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDL-DIKISKSTVLL 697
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++++ KA +V + + M G PN Y +I K F ++EL + +M
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 757
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN---------------- 172
+PD+ +N L + +G D + Y AG++P +T+N
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817
Query: 173 -------------------ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
ILL + GKA +E+ + E M+ Y Y++++ +
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
A + + E+L M+ + I+P+ T+ L+ +YG +G P++ VL + +S++ + T
Sbjct: 878 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEIST 937
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ ++DAY R + ++ L M++ G +PD + + +RA S
Sbjct: 938 LPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 983
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 155/328 (47%), Gaps = 14/328 (4%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++ C Q + A +F+ M+ C + ++ A++S +GR G +A + + +
Sbjct: 139 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 197
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
QPD TY+ L+ + K ++V+ + ++ G R + +TYNT+I YG+ +
Sbjct: 198 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK---MGRL 254
Query: 118 ELTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+L L +M + C PD T + + G +I K E+ AG++P++ TF+ L
Sbjct: 255 DLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 314
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ +Y K+G + + M + + Y +++D F R+ + +++ L+R M +
Sbjct: 315 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 374
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP L+ A + +++ V++ ++ M V + L+ A +C ++
Sbjct: 375 KPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----ECISQGAS 430
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L+ +G +PD + +++ AY G
Sbjct: 431 LLKRACLQGYEPDGKSLLSILDAYEKMG 458
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + ++A +F+ +V++G + ++ +LL A+ + G ++ + E + + D
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA-GFRKD 237
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I K D L +M G P+ VTY L+D+ G+ +E L
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M +P + T + + A+ SG+ D E+ +++ +G++P + ++LD + ++
Sbjct: 298 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSD 357
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-------GDLKQMEYLFRL----MRS 231
K+ + M K Y Y +++ A + G ++ ME +F + + S
Sbjct: 358 ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISS 417
Query: 232 ERIKPSCV--------------------TLCSLVRAYGHAGKPEKLGSVLRFI 264
IK C+ +L S++ AY GK EK S+L +I
Sbjct: 418 ILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWI 470
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 147/333 (44%), Gaps = 6/333 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE A++L N S A++ AYG+ L+ +A + ++ +K + D +
Sbjct: 568 PETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQ--ESGVDRRIW 625
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + ++ ++ +A+ M +G P + N ++ A E+ + + ++
Sbjct: 626 NALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQD 685
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + T+ L AF +G + + K Y ++AG P+++ + I++ F
Sbjct: 686 LDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRD 745
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ ++ M+ + +V N ++ + G+ + ++ + ++P T +L+
Sbjct: 746 VELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIV 805
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y +PE+ ++L + + + L+ A G+ K + + + E M+ +G +
Sbjct: 806 MYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRL 865
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
++ Y M++ Y +NH+K + L+ M E
Sbjct: 866 NRSIYHMMMKIY--RNARNHSKA-EHLLSAMKE 895
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 143/374 (38%), Gaps = 74/374 (19%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLE----HMKNT----PDCQ------------ 60
+G + + +S ++L AY + G +K SLLE H+ N+ +C
Sbjct: 438 QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVD 497
Query: 61 -----------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT 103
D + Y LI +A F + + DM GI P+ Y +
Sbjct: 498 AIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQS 557
Query: 104 L------------------------------------IDAYGRAKMFAEMELTLVKMLSE 127
+ I+AYG+ K++ + E VK L +
Sbjct: 558 IIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAE-NFVKGLKQ 616
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ D N + A+ SG + ++ G P++ + N ++ + G +++
Sbjct: 617 ESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDEL 676
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ +Q + T ++++AF +AGD+ ++ ++ M++ P+ ++
Sbjct: 677 YVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISL 736
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
H + + ++ ++ + D V N L+ Y F V + + G +PD
Sbjct: 737 LCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPD 796
Query: 308 KVTYRTMVRAYSTN 321
+ TY T++ YS N
Sbjct: 797 EDTYNTLIVMYSRN 810
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K E+A LF+ M +G N + ++ Y + KA LL MK +P
Sbjct: 843 GKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED-GIEPT 901
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T IL+ S + D+ + +L+ + + + +T+ Y+T++DAY R + ++ L+
Sbjct: 902 IATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLL 961
Query: 123 KMLSEDCEPD--VWT 135
+M + EPD VWT
Sbjct: 962 EMKRDGVEPDHQVWT 976
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M N+ F+ LL+ + G + K F +L+ MK+ +PD Y++
Sbjct: 362 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNV 420
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID---AYGRAKMFAEMELTLVKML 125
+I + K D M ++GI P+ VT+NTLID +GR + EM M
Sbjct: 421 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM---FEAME 477
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P T N + ++G+ + D M++ K +S GI P++ T L+D YGK+G F
Sbjct: 478 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 537
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+E M+ + YN +I+A+ + G +Q FR+M S+ +KPS + L SL+
Sbjct: 538 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 597
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + +VL+++ + + D V + L+ A R+ F ++ V E M GCK
Sbjct: 598 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 657
Query: 306 PDKVTYRTMVRA 317
PD+ R+M+R+
Sbjct: 658 PDRKA-RSMLRS 668
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 149/326 (45%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P KA +L G A T + +++SA SG +A +L E ++ + +P
Sbjct: 250 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS-GIKP 308
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +K ++++S+M +G+ P+ TY+ LIDAY A + + L
Sbjct: 309 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 368
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + D +P+ + + L F + G+ + ++ +S G++P +N+++D++GK
Sbjct: 369 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 428
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + M VT+N +ID + G E +F M P T
Sbjct: 429 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 488
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ +YG + + + +L + + I+ + V LVD YG+ F + LE M+
Sbjct: 489 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 548
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 549 VGLKPSSTMYNALINAYAQRGLSEQA 574
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ + G T+++ ALL Y ++G A S++ M+ PD +TYS+L
Sbjct: 293 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-GVSPDEHTYSLL 351
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + A ++ + +L +M ++PN+ ++ L+ + + + L +M S
Sbjct: 352 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 411
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD N + FG +D +++ S GI+P T+N L+D + K G
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 471
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M++ TYNI+I+++G M+ L M+S+ I P+ VT +LV YG
Sbjct: 472 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 531
Query: 250 HAG-----------------KP------------------EKLGSVLRFIDNSDIMLDTV 274
+G KP E+ + R + + + +
Sbjct: 532 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 591
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
N L++A+G + AE VL+ M++ G KPD VTY T+++A
Sbjct: 592 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 634
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 152/344 (44%), Gaps = 43/344 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
++ L+ A GRS +AF L + TP TY+ LI +C + +K L++ M
Sbjct: 141 YSILIHALGRSEKLYEAFLLSQKQTLTP------LTYNALIGACARNNDIEKALNLIAKM 194
Query: 90 STQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLSED-CEPDVWTMN---------- 137
G + + V Y+ +I + R+ K+ + M L L K + D E DV +N
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 254
Query: 138 -------------------------CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ A +SG+ E +E+ + +GI+P +N
Sbjct: 255 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 314
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y K G + +++ M+K S TY+++IDA+ AG + + + M +
Sbjct: 315 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 374
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
++P+ L+ + G+ +K VL+ + + + D F+N ++D +G+ C
Sbjct: 375 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 434
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ M G +PD+VT+ T++ + +G A+E + +E+
Sbjct: 435 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 478
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + A F M+ EG + + ++ L+ + + G A + E M+ C P
Sbjct: 425 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLP 483
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+I+I S +D ++ LL M +QGI PN VT+ TL+D YG++ F + L
Sbjct: 484 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 543
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S +P N + A+ G + + S G++PS+ N L++++G+
Sbjct: 544 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 603
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ AV++YM++ +VTY ++ A R +++ ++ M KP
Sbjct: 604 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 658
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M N+ F+ LL+ + G + K F +L+ MK+ +PD Y++
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNV 449
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID---AYGRAKMFAEMELTLVKML 125
+I + K D M ++GI P+ VT+NTLID +GR + EM M
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM---FEAME 506
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P T N + ++G+ + D M++ K +S GI P++ T L+D YGK+G F
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+E M+ + YN +I+A+ + G +Q FR+M S+ +KPS + L SL+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + +VL+++ + + D V + L+ A R+ F ++ V E M GCK
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 306 PDKVTYRTMVRA 317
PD+ R+M+R+
Sbjct: 687 PDRKA-RSMLRS 697
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 149/326 (45%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P KA +L G A T + +++SA SG +A +L E ++ + +P
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS-GIKP 337
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +K ++++S+M +G+ P+ TY+ LIDAY A + + L
Sbjct: 338 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + D +P+ + + L F + G+ + ++ +S G++P +N+++D++GK
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + M VT+N +ID + G E +F M P T
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ +YG + + + +L + + I+ + V LVD YG+ F + LE M+
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ A
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQA 603
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ + G T+++ ALL Y ++G A S++ M+ PD +TYS+L
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-GVSPDEHTYSLL 380
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + A ++ + +L +M ++PN+ ++ L+ + + + L +M S
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD N + FG +D +++ S GI+P T+N L+D + K G
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M++ TYNI+I+++G M+ L M+S+ I P+ VT +LV YG
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 250 HAG-----------------KP------------------EKLGSVLRFIDNSDIMLDTV 274
+G KP E+ + R + + + +
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
N L++A+G + AE VL+ M++ G KPD VTY T+++A
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 152/344 (44%), Gaps = 43/344 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
++ L+ A GRS +AF L + TP TY+ LI +C + +K L++ M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTP------LTYNALIGACARNNDIEKALNLIAKM 223
Query: 90 STQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLSED-CEPDVWTMN---------- 137
G + + V Y+ +I + R+ K+ + M L L K + D E DV +N
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 138 -------------------------CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ A +SG+ E +E+ + +GI+P +N
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y K G + +++ M+K S TY+++IDA+ AG + + + M +
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
++P+ L+ + G+ +K VL+ + + + D F+N ++D +G+ C
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ M G +PD+VT+ T++ + +G A+E + +E+
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + A F M+ EG + + ++ L+ + + G A + E M+ C P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLP 512
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+I+I S +D ++ LL M +QGI PN VT+ TL+D YG++ F + L
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S +P N + A+ G + + S G++PS+ N L++++G+
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ AV++YM++ +VTY ++ A R +++ ++ M KP
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C ANT++FT +++ YG++ + + MK+ C+P
Sbjct: 255 LLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSI-GCKP 313
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 314 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 373
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + E +E+ + G+ P++ + +LL ++ ++
Sbjct: 374 SLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARS 433
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ + VM + K + N +++A+ RAG L ME LF M R T
Sbjct: 434 GNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAM-ERRGDADVGTY 492
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
V AYG AG ++ + + + D V + + AY R K + G++E M
Sbjct: 493 NVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVD 552
Query: 302 RGCKPDKVTYRTMVRAYS 319
GC PD T R ++ A S
Sbjct: 553 AGCYPDAGTARVLLAACS 570
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 2/320 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +Q KA ++ A+++ C ++ LL AY +G +A ++ M+ P+
Sbjct: 186 GKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREH-GIPPN 244
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA +K + M + R NT T+ +I+ YG+AK
Sbjct: 245 ATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFN 304
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C+P++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 305 EMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 364
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + MQ +YNI++DA+GRAG + E +F ++ + P+ +
Sbjct: 365 LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHM 424
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ A+ +G + V+ + S + DT N +++AY R +M+ + M++R
Sbjct: 425 LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERR 484
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G D TY V AY G
Sbjct: 485 G-DADVGTYNVAVNAYGRAG 503
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LI++YG+ + + E + +L C P T LRA+ N+G + E
Sbjct: 172 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 231
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + GI P+ +N LD KA EK V + M++ T+ ++I+ +G
Sbjct: 232 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYG 291
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +F M+S KP+ T +LV A+ G EK V + + D
Sbjct: 292 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 351
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+N L++AY R + +MQ GC+PD+ +Y +V AY G+ A+ F++L
Sbjct: 352 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 411
Query: 334 VEK 336
++
Sbjct: 412 KQR 414
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ +YG+ +KA S+ + C P +TY++L+++ A + + + ++S+M
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEA-QCVPTEDTYALLLRAYCNAGSLHRAEGVISEM 236
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
GI PN YN +D +A+ CT +A
Sbjct: 237 REHGIPPNATVYNAYLDGLLKAR-------------------------CTEKAV------ 265
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ Y++ + + + TF ++++ YGKA V M+ I TY +
Sbjct: 266 ----EVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTAL 321
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++AF R G ++ E +F M+ +P +L+ AY AG P+ + + +
Sbjct: 322 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGC 381
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D +N LVDAYGR + + V E ++QRG P ++ ++ A++ +G +E
Sbjct: 382 EPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEE 441
Query: 330 FQDLVEK 336
+ K
Sbjct: 442 VMAQLHK 448
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK------------- 54
P+ A E+F M GC+ + S+ L+ AYGR+GL + A ++ E +K
Sbjct: 366 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHML 425
Query: 55 ---------NTPDCQ------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
N C+ PD + ++ + +A D ++ L + M +G
Sbjct: 426 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 485
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ TYN ++AYGRA ME + + DV T + A+ +
Sbjct: 486 -DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCV 544
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
E+ AG P T +LL + E+++A++ M K
Sbjct: 545 GMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 587
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ +P I +N+L++SYGK K ++ + + T TY +++ A+ AG L +
Sbjct: 169 SSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHR 228
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
E + MR I P+ + + A EK V + + +T F +++
Sbjct: 229 AEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMIN 288
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDE 339
YG+ K V M+ GCKP+ TY +V A++ G+ A+E F+++ + E
Sbjct: 289 VYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHE 347
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E+ +L Q D G +T S+ L+ AY R+G D+A + +MK N P + Y
Sbjct: 271 EQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVP---ANAFIY 327
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S L+ + A +D LL DM I+PN +N LID YG+ + T +M
Sbjct: 328 SRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDK 387
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +PDV T N + A +G I ++ Q PS++T+NI+L++ G +++
Sbjct: 388 EGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKE 447
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
M+ +++ M+ +VTY ++D++G + ++ + M+S+ ++PS C+L
Sbjct: 448 MALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALAN 507
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+Y G E+ V + ++ + L+ N L++A+G + E V + + + G P
Sbjct: 508 SYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSP 567
Query: 307 DKVTYRTMVRA 317
D VTY T+++A
Sbjct: 568 DVVTYTTLMKA 578
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 162/343 (47%), Gaps = 13/343 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A LF + G ++ A++ R + A L+ M+ + QP
Sbjct: 88 LSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGS-GFQP 146
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAE 116
D Y+++ ++C K D + + +++ +G+ +T YN +I+AY RA K F
Sbjct: 147 DNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQY 206
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M L M + D PDV + + + ++D E Y + +S + ++ T N LL
Sbjct: 207 MGL----MQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLS 262
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+Y + E++ +M+ + + +Y ++IDA+ RAG L Q + F M+ E +
Sbjct: 263 AYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPA 322
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ L+ AY +A + + +L+ + S+I + FN L+D YG+ +
Sbjct: 323 NAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTF 382
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M + G KPD VT+ +++ A+ G+ A DL+++M E
Sbjct: 383 AQMDKEGFKPDVVTWNSLIEAHCRAGLITEA---LDLLKQMQE 422
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 36/351 (10%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL------ 74
EG + +T+ + +++AY R+G DKAF + M+ D PDV +YS LI++ +
Sbjct: 178 EGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQAC-DLVPDVRSYSSLIETLVVVRRLD 236
Query: 75 ---KAFA--------------------------FDKVQALLSDMSTQGIRPNTVTYNTLI 105
A+A ++V+ L+ D G++ +T +Y LI
Sbjct: 237 DAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLI 296
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
DAY RA + + M E+ + + + + A+ N+ Q D + + ++ I+
Sbjct: 297 DAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIK 356
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ FNIL+D+YGK G + M K + +VT+N +I+A RAG + + L
Sbjct: 357 PNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDL 416
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ M+ PS T ++ A G + +++ +L + + + V + LVD+YG
Sbjct: 417 LKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGT 476
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
K + E L+ M+ +G +P Y + +Y+ G+ A E +EK
Sbjct: 477 SKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEK 527
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 5/325 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A F M E AN ++ L+ AY + +D LL+ M + + +P+ ++I
Sbjct: 306 DQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYAS-NIKPNQFIFNI 364
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + K + + M +G +P+ VT+N+LI+A+ RA + E L +M +
Sbjct: 365 LIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERE 424
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P + T N L A G + M ++ + G+ P++ T+ L+DSYG + + + S
Sbjct: 425 CVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREAS 484
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+ + Y + +++ + G +Q +F+ M + ++ + L L+ A+
Sbjct: 485 EYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAF 544
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AGK + SV +I + D V + L+ A + + ++ V E M + GC PD
Sbjct: 545 GVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPDD 604
Query: 309 VTYRTMVRA---YSTNGMKNHAKEF 330
+ + M+R+ + G K EF
Sbjct: 605 MA-KDMLRSAQRFKQRGPKITKSEF 628
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 3/254 (1%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKML 125
+I I K ++ L + G+ P + YN ++ R ++ +EL + +M
Sbjct: 82 AIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALEL-MNQMR 140
Query: 126 SEDCEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+PD +A +D + + + G++ +N ++++Y +AG
Sbjct: 141 GSGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDP 200
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+K M MQ + +Y+ +I+ L E + M+S+ K + TL +L
Sbjct: 201 DKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNAL 260
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AY E++ +++ +++ + L T + L+DAY R + K M+
Sbjct: 261 LSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENV 320
Query: 305 KPDKVTYRTMVRAY 318
+ Y ++ AY
Sbjct: 321 PANAFIYSRLMVAY 334
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + F + EG A T ++ +LL +G++G++ +A S+L+ M+ +C PD+ TY+
Sbjct: 297 DEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNE 355
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----------------- 111
L+ + ++A ++ + M +GI PN +TY T+I+AYG+A
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 112 ------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
EM L M S C P+ T N L GN G +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + + +S G +P+ +TFN L+ +YG+ G + + E M K ++ + TYN +++A
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R GD + E + M+S+ KP+ + ++ Y G + + I N I
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSW 595
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ LV A + + M+ + + G KPD V + +M+ ++ N M + A E L
Sbjct: 596 ILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL 655
Query: 334 VEK 336
+ +
Sbjct: 656 IRE 658
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 147/303 (48%), Gaps = 2/303 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ Q ++ GR A LL+ + + + DV ++ ++ + + +++ +
Sbjct: 173 DNQLVELMVRILGRESQHSVALRLLDEI-SVEEYSLDVRAWTTILHAYSRIGKYERAITM 231
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
M G+ P VTYN ++D YG+ + + ++ L +M S E D +T + + A G
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACG 291
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G +D K + + +S G T+N LL +GKAG + + ++++ M+K + +V
Sbjct: 292 REGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLV 351
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN ++ A+ RAG ++ M + I P+ +T +++ AYG AGK +K S R +
Sbjct: 352 TYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQM 411
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
S + + +N ++ G+ EM +L M+ GC P+ VT+ TM+ GM
Sbjct: 412 KESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMH 471
Query: 325 NHA 327
+
Sbjct: 472 KYV 474
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 159/392 (40%), Gaps = 73/392 (18%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + M+ +G N ++T +++AYG++G DKA S MK + C P+V TY+
Sbjct: 367 EEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNA 425
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K +++ +L DM + G PN+VT+NT++ G M + +M S
Sbjct: 426 ILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG 485
Query: 129 CEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFN--------------- 172
EP+ T N + A+G G QID + K YE+ AG P + T+N
Sbjct: 486 FEPNRDTFNALIGAYGRCGSQIDVV-KMYEEMIKAGFTPCVTTYNALLNALARRGDWEAA 544
Query: 173 --------------------ILLDSYGKAGHFEKMSAVMEYMQKYHY--SWTI------- 203
++L+ Y K G+ + + E + H SW +
Sbjct: 545 ESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLA 604
Query: 204 --------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
V +N ++ F + + + RL+R ++P
Sbjct: 605 NFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPD 664
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT SL+ Y G+ K +L+ I S D V +N ++ + R E L
Sbjct: 665 LVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M G +P VTY T V YS GM + +E
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEE 756
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 156/330 (47%), Gaps = 1/330 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+ +F+ M G + N +F AL+ AYGR G + E M P V TY+ L+
Sbjct: 474 VNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA-GFTPCVTTYNALL 532
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + ++ ++++ DM ++G +PN +Y+ +++ Y + +E ++ +
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + + A + ME+ +++F G +P + FN +L + K +++ +
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ +++ +VTYN ++D + R G+ + E + + ++ KP V+ ++++ +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ L + S I V +N V Y F+E++ V+ M Q C+P+++T
Sbjct: 713 QGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELT 772
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Y+ +V Y A +F + +MD++
Sbjct: 773 YKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A L + E + +++T +L AY R G +++A ++ E M+ T
Sbjct: 183 ILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKT-GLS 241
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K +++K+ LL +M + G+ + T +T+I A GR + E
Sbjct: 242 PTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARK 301
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ SE +T N L+ FG +G ++ + P + T+N L+ +Y
Sbjct: 302 FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV 361
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG E+ + ++ M + +TY VI+A+G+AG + FR M+ P+
Sbjct: 362 RAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVC 421
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G + E++ +L + ++ ++V +N ++ G + V M
Sbjct: 422 TYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREM 481
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMK-NHAKEFQDLVEKMDETCL 342
+ G +P++ T+ ++ AY G + + K ++++++ C+
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCV 525
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ + S + + D + +R G Q + ++ + + +L +Y +
Sbjct: 162 ILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSR 221
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCV 239
G +E+ + E M+K S T+VTYN+++D +G+ G ++ L MRS ++
Sbjct: 222 IGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEF 281
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ A G G ++ + + + T +N L+ +G+ ++E +L+ M
Sbjct: 282 TCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ C PD VTY +V AY G +F D
Sbjct: 342 EKNNCPPDLVTYNELVAAYVRAGFHEEGADFID 374
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + F + EG A T ++ +LL +G++G++ +A S+L+ M+ +C PD+ TY+
Sbjct: 297 DEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNE 355
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----------------- 111
L+ + ++A ++ + M +GI PN +TY T+I+AYG+A
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 112 ------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
EM L M S C P+ T N L GN G +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + + +S G +P+ +TFN L+ +YG+ G + + E M K ++ + TYN +++A
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R GD + E + M+S+ KP+ + ++ Y G + + I N I
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSW 595
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ LV A + + M+ + + G KPD V + +M+ ++ N M + A E L
Sbjct: 596 ILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL 655
Query: 334 VEK 336
+ +
Sbjct: 656 IRE 658
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 147/303 (48%), Gaps = 2/303 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ Q ++ GR A LL+ + + + DV ++ ++ + + +++ +
Sbjct: 173 DNQLVELMVRILGRESQHSVALRLLDEI-SVEEYSLDVRAWTTILHAYSRIGKYERAITM 231
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
M G+ P VTYN ++D YG+ + + ++ L +M S E D +T + + A G
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACG 291
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G +D K + + +S G T+N LL +GKAG + + ++++ M+K + +V
Sbjct: 292 REGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLV 351
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN ++ A+ RAG ++ M + I P+ +T +++ AYG AGK +K S R +
Sbjct: 352 TYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQM 411
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
S + + +N ++ G+ EM +L M+ GC P+ VT+ TM+ GM
Sbjct: 412 KESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMH 471
Query: 325 NHA 327
+
Sbjct: 472 KYV 474
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 159/392 (40%), Gaps = 73/392 (18%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + M+ +G N ++T +++AYG++G DKA S MK + C P+V TY+
Sbjct: 367 EEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNA 425
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K +++ +L DM + G PN+VT+NT++ G M + +M S
Sbjct: 426 ILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG 485
Query: 129 CEPDVWTMNCTLRAFGNSG-QIDTMEKCYEKFQSAGIQPSINTFN--------------- 172
EP+ T N + A+G G QID + K YE+ AG P + T+N
Sbjct: 486 FEPNRDTFNALIGAYGRCGSQIDVV-KMYEEMIKAGFTPCVTTYNALLNALARRGDWEAA 544
Query: 173 --------------------ILLDSYGKAGHFEKMSAVMEYMQKYHY--SWTI------- 203
++L+ Y K G+ + + E + H SW +
Sbjct: 545 ESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLA 604
Query: 204 --------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
V +N ++ F + + + RL+R ++P
Sbjct: 605 NFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPD 664
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT SL+ Y G+ K +L+ I S D V +N ++ + R E L
Sbjct: 665 LVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M G +P VTY T V YS GM + +E
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEE 756
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 156/330 (47%), Gaps = 1/330 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+ +F+ M G + N +F AL+ AYGR G + E M P V TY+ L+
Sbjct: 474 VNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA-GFTPCVTTYNALL 532
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + ++ ++++ DM ++G +PN +Y+ +++ Y + +E ++ +
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + + A + ME+ +++F G +P + FN +L + K +++ +
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ +++ +VTYN ++D + R G+ + E + + ++ KP V+ ++++ +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ L + S I V +N V Y F+E++ V+ M Q C+P+++T
Sbjct: 713 QGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELT 772
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Y+ +V Y A +F + +MD++
Sbjct: 773 YKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A L + E + +++T +L AY R G +++A ++ E M+ T
Sbjct: 183 ILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKT-GLS 241
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K +++K+ LL +M + G+ + T +T+I A GR + E
Sbjct: 242 PTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARK 301
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ SE +T N L+ FG +G ++ + P + T+N L+ +Y
Sbjct: 302 FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV 361
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG E+ + ++ M + +TY VI+A+G+AG + FR M+ P+
Sbjct: 362 RAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVC 421
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G + E++ +L + ++ ++V +N ++ G + V M
Sbjct: 422 TYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREM 481
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMK-NHAKEFQDLVEKMDETCL 342
+ G +P++ T+ ++ AY G + + K ++++++ C+
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCV 525
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ + S + + D + +R G Q + ++ + + +L +Y +
Sbjct: 162 ILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSR 221
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCV 239
G +E+ + E M+K S T+VTYN+++D +G+ G ++ L MRS ++
Sbjct: 222 IGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEF 281
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ A G G ++ + + + T +N L+ +G+ ++E +L+ M
Sbjct: 282 TCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ C PD VTY +V AY G +F D
Sbjct: 342 EKNNCPPDLVTYNELVAAYVRAGFHEEGADFID 374
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 173/378 (45%), Gaps = 40/378 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +K E+F M G +TA+++AYGR+G F + LL MK
Sbjct: 145 LLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQE-RVS 203
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY+ +I +C + ++ + L ++M +GI+P+ +TYNTL+ A + E E+
Sbjct: 204 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEM 263
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M PD+ T + ++ FG +++ + + + +S G P I ++N+LL++Y
Sbjct: 264 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYA 323
Query: 180 KAGHFEKMSAVMEYMQKY------------------HYSWTIV----------------- 204
+ G ++ V MQ H + V
Sbjct: 324 ELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAG 383
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I FG G K++ LF M E ++P+ T L+ A G G E +L +
Sbjct: 384 TYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHM 443
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ I+ + + +++A+G+ + E V M + G P TY + + A++ G+
Sbjct: 444 NEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLY 503
Query: 325 NHAKEFQDLVEKMDETCL 342
KE + ++ +M+E+ L
Sbjct: 504 ---KEAEAILSRMNESGL 518
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 9 EKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+++ LF+ M + C N +T +++ GR GL DK + + M + + V Y+
Sbjct: 117 QRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVAR-TVYVYT 175
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-VKMLS 126
+I + + F LL+ M + + P+ +TYNT+I+A R + E L L +M
Sbjct: 176 AVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRH 235
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +PDV T N L A + G D E + +GI P INT++ L+ ++GK EK
Sbjct: 236 EGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEK 295
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+S ++ M+ I +YN++++A+ G +K+ +FR M++ + T L+
Sbjct: 296 VSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLN 355
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG G+ + + + + S+ D +N L+ +G F E+ + M + +P
Sbjct: 356 LYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEP 415
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
+ TY ++ A G+ AK+
Sbjct: 416 NMETYEGLIFACGKGGLYEDAKKI 439
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 162/337 (48%), Gaps = 5/337 (1%)
Query: 1 MLGKCKQ---PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+LG C ++A +F+ M + G + +++ L+ +G+ +K LL M++
Sbjct: 248 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGG 307
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ PD+ +Y++L+++ + + + + M G N TY+ L++ YG+ + ++
Sbjct: 308 NL-PDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDV 366
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++M + +PD T N ++ FG G + + ++P++ T+ L+ +
Sbjct: 367 RDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA 426
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GK G +E ++ +M + + Y VI+AFG+A ++ +F M P+
Sbjct: 427 CGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPT 486
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T S + A+ G ++ ++L ++ S + D FN ++ A+ + + E
Sbjct: 487 VETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYV 546
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
M++ C+P+++T ++ Y + G+ + ++E FQ++
Sbjct: 547 EMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEI 583
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 5/281 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG K+ A ++F+ M GC AN +++ LL+ YG+ G +D + MK + P
Sbjct: 325 LGSIKE---AMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMK-VSNTDP 380
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ILI+ + F +V L DM + + PN TY LI A G+ ++ + + L
Sbjct: 381 DAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKIL 440
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ M + P + AFG + + + G P++ T+N + ++ +
Sbjct: 441 LHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARG 500
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +++ A++ M + + ++N VI AF + G ++ + M +P+ +TL
Sbjct: 501 GLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTL 560
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
++ Y AG ++ + I S I L +V CL+ A
Sbjct: 561 EVVLSVYCSAGLVDESEEQFQEIKASGI-LPSVMCYCLMLA 600
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + + ++F M D + ++ L+ +G G F + +L M + +
Sbjct: 356 LYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE-NVE 414
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY LI +C K ++ + +L M+ +GI P++ Y +I+A+G+A ++ E +
Sbjct: 415 PNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVV 474
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M P V T N + AF G E + +G++ +++FN ++ ++ +
Sbjct: 475 FNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQ 534
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +E+ M+K + +T +V+ + AG + + E F+ +++ I PS +
Sbjct: 535 GGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMC 594
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFID 265
C ++ Y K ++L ID
Sbjct: 595 YCLMLALY---AKNDRLNDAYNLID 616
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 133/295 (45%), Gaps = 2/295 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF MV+E + N +++ L+ A G+ GL++ A +L HM N P Y+ +I++
Sbjct: 404 LFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHM-NEKGIVPSSKAYTGVIEAF 462
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A +++ + + M+ G P TYN+ I A+ R ++ E E L +M + DV
Sbjct: 463 GQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDV 522
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ N ++AF GQ + K Y + + A +P+ T ++L Y AG ++ +
Sbjct: 523 HSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQE 582
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA-YGHAG 252
++ +++ Y +++ + + L L M + R+ + +++ +
Sbjct: 583 IKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDES 642
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + V +++ L F+N L++A + VL +RG P+
Sbjct: 643 NWQIVEYVFDKLNSEGCGLGMRFYNALLEALWWMFQRERAARVLNEASKRGLFPE 697
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ + A G I +C + F++ + S+N F ++ + + G +++ +
Sbjct: 70 DVETLINRITALPPRGSI---ARCLDPFKN---KLSLNDFALVFKEFAQRGDWQRSLRLF 123
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + Y I+I GR G L + +F M S + + +++ AYG
Sbjct: 124 KYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGR 183
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKV 309
G+ +L + + + +N +++A R E + G+ M+ G +PD +
Sbjct: 184 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 243
Query: 310 TYRTMVRAYSTNGMKNHAK 328
TY T++ A + G+ + A+
Sbjct: 244 TYNTLLGACAHRGLGDEAE 262
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +Q KA ++ A+++ C ++ LL AY +G +A ++ M+ P+
Sbjct: 329 GKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREH-GIPPN 387
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA +K + M + R NT T+ +I+ YG+AK
Sbjct: 388 ATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFN 447
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C+P++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 448 EMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 507
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + MQ +YNI++DA+GRAG + E +F ++ + P+ +
Sbjct: 508 LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHM 567
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ A+ +G + V+ + S + DT N +++AY R +M+ +L M++R
Sbjct: 568 LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERR 627
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G D TY V AY G
Sbjct: 628 G-DADVGTYNVAVNAYGRAG 646
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C ANT++FT +++ YG++ + + MK+ C+P
Sbjct: 398 LLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSI-GCKP 456
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 457 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 516
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G + E +E+ + G+ P++ + +LL ++ ++
Sbjct: 517 SLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARS 576
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ + VM + K + N +++A+ RAG L ME L M R T
Sbjct: 577 GNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAM-ERRGDADVGTY 635
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
V AYG AG ++ + + + D V + + AY R K + G++E M
Sbjct: 636 NVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVD 695
Query: 302 RGCKPDKVTYRTMVRAYS 319
GC PD T R ++ A S
Sbjct: 696 AGCYPDAGTARVLLAACS 713
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LI++YG+ + + E + +L C P T LRA+ N+G + E
Sbjct: 315 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 374
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + GI P+ +N LD KA EK V + M++ T+ ++I+ +G
Sbjct: 375 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYG 434
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +F M+S KP+ T +LV A+ G EK V + + D
Sbjct: 435 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 494
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+N L++AY R + +MQ GC+PD+ +Y +V AY G+ A+ F++L
Sbjct: 495 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 554
Query: 334 VEK 336
++
Sbjct: 555 KQR 557
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ +YG+ +KA S+ + C P +TY++L+++ A + + + ++S+M
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEA-QCVPTEDTYALLLRAYCNAGSLHRAEGVISEM 379
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
GI PN YN +D +A+ CT +A
Sbjct: 380 REHGIPPNATVYNAYLDGLLKAR-------------------------CTEKAV------ 408
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ Y++ + + + TF ++++ YGKA V M+ I TY +
Sbjct: 409 ----EVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTAL 464
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++AF R G ++ E +F M+ +P +L+ AY AG P+ + + +
Sbjct: 465 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGC 524
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D +N LVDAYGR + + V E ++QRG P ++ ++ A++ +G +E
Sbjct: 525 EPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEE 584
Query: 330 FQDLVEK 336
+ K
Sbjct: 585 VMAQLHK 591
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 35/223 (15%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK------------- 54
P+ A E+F M GC+ + S+ L+ AYGR+GL + A ++ E +K
Sbjct: 509 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHML 568
Query: 55 ---------NTPDCQ------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
N C+ PD + ++ + +A D ++ LL+ M +G
Sbjct: 569 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG 628
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ TYN ++AYGRA ME + + DV T + A+ +
Sbjct: 629 -DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCV 687
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
E+ AG P T +LL + E+++A++ M K
Sbjct: 688 GMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 730
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
C + +P I +N+L++SYGK K ++ + + T TY +++ A+
Sbjct: 305 CEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYC 364
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
AG L + E + MR I P+ + + A EK V + + +T
Sbjct: 365 NAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTE 424
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
F +++ YG+ K V M+ GCKP+ TY +V A++ G+ A+E F+++
Sbjct: 425 TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 484
Query: 334 VEKMDE 339
+ E
Sbjct: 485 QQAGHE 490
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 2/323 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
+ +++ C ++ LL AY +SGL +KA ++ M+ P Y+ I +
Sbjct: 178 YLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKY-GLSPSAIVYNAYIDGLV 236
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K K + M G +P T TY LI+ YG+ + +M ++ C+P++
Sbjct: 237 KGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNIC 296
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + A G + E+ +E+ Q AG +P + +N L++SY +AG + + M
Sbjct: 297 TFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLM 356
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
Q +YNI++DA+GRAG + + +F M+ I P+ + L+ AY AG
Sbjct: 357 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNV 416
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
K ++ + S + DT N +++ YGRL F +M+ + MQ+ C+ D TY +
Sbjct: 417 AKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNIL 476
Query: 315 VRAYSTNGMKNHAKE-FQDLVEK 336
+ Y G +E FQ L K
Sbjct: 477 INVYGRAGFVERMEELFQLLPAK 499
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 1/311 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E+F M +GC T ++T L++ YG+ A ++ + M+ T C+P++ T++ L
Sbjct: 243 KAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMR-TQRCKPNICTFTAL 301
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + + +K + + M G P+ YN L+++Y RA M C
Sbjct: 302 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EPD + N + A+G +G + + +E+ + GI P++ + +LL +Y AG+ K
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCED 421
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M K N +++ +GR G +ME LF M+ + T L+ YG
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AG E++ + + + ++ D V + + AY R K + + E M GC PD
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541
Query: 310 TYRTMVRAYST 320
T + ++ A S+
Sbjct: 542 TAKVLLSACSS 552
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 5/334 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F M G + + A + + G KA + MK CQP +TY++
Sbjct: 207 EKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRD-GCQPTTDTYTM 265
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K Q + +M TQ +PN T+ L++A R + + E +M
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV+ N + ++ +G + + Q G +P ++NI++D+YG+AG E
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 385
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M++ + T+ ++ +++ A+ AG++ + E + M +KP + S++ Y
Sbjct: 386 AVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLY 445
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ K+ + + D +N L++ YGR M+ + +++ + +PD
Sbjct: 446 GRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDV 505
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETC 341
VT+ + + AYS K K +L EKM D C
Sbjct: 506 VTWTSRIGAYSR---KKLYKRCLELFEKMIDAGC 536
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + A +F M + C N +FTAL++A R GL +KA + E M+ +PD
Sbjct: 271 GKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA-GYEPD 329
Query: 63 VNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y+ L++S +A F + + + S M G P+ +YN ++DAYGRA + + +
Sbjct: 330 VYAYNALMESYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF 388
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M P + + L A+ ++G + E + +G++P N +L+ YG+
Sbjct: 389 EEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRL 448
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F KM + MQK I TYNI+I+ +GRAG +++ME LF+L+ ++ ++P VT
Sbjct: 449 GQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTW 508
Query: 242 CSLVRAY 248
S + AY
Sbjct: 509 TSRIGAY 515
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M+ RP+ + YN L+DAYG+ ++ ++E T +++L C P T L+A+ SG
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ E + + + G+ PS +N +D K G+ K + M++ T TY +
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ +G+ + +F MR++R KP+ T +LV A G EK + + +
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N L+++Y R + +MQ GC+PD+ +Y MV AY G+ A+
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 385
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ M + G + + ++ AL+ +Y R+G A FSL++HM C+PD +
Sbjct: 312 EKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM----GCEPDRAS 367
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A + QA+ +M GI P ++ L+ AY A A+ E + +M
Sbjct: 368 YNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMH 427
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD + MN L +G GQ ME + Q + I+T+NIL++ YG+AG E
Sbjct: 428 KSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 487
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+M + + + + +VT+ I A+ R K+ LF M P T L+
Sbjct: 488 RMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLL 547
Query: 246 RAYGHAGKPEKLGSVLR 262
A + E++ +V+R
Sbjct: 548 SACSSEEQIEQVTNVVR 564
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ ++ AYGR+GL + A ++ E MK P + ++
Sbjct: 346 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRI-GITPTMKSHM 404
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + A K + ++ M G++P+T N++++ YGR F +ME M
Sbjct: 405 LLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKG 464
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C D+ T N + +G +G ++ ME+ ++ + ++P + T+ + +Y + +++
Sbjct: 465 PCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRC 524
Query: 188 SAVMEYM 194
+ E M
Sbjct: 525 LELFEKM 531
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 36/150 (24%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ Q K +LF M C A+ ++ L++ YGR+G ++
Sbjct: 444 LYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVER--------------- 488
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ L + + + P+ VT+ + I AY R K++
Sbjct: 489 ---------------------MEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEL 527
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
KM+ C PD T L A + QI+
Sbjct: 528 FEKMIDAGCYPDGGTAKVLLSACSSEEQIE 557
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 1/328 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +L +M ++ + ++T+LL G+SG ++AF++ M +P
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH-EP 771
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV Y+ L+ K + M+ + P+ VTY++LID+ G+ E
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+S+ C P+V + + +FG G +D + +E+ Q P+I T+N LL KA
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++E M+K +VTYNI+ID G+ G + + E F+ M+ + I P +T
Sbjct: 892 GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ + G K + + ++ V +N L+D GR E + M+
Sbjct: 952 TSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+GC PD +T M R S + HA E
Sbjct: 1012 KGCMPDGITIGIMKRILSVREQQFHALE 1039
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 1/317 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F + + +T + +++ +S D+A L++ MKN + PD+ TY+ L+
Sbjct: 687 ALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ-NILPDLFTYTSLL 745
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ ++ + + M+ +G P+ V Y +L+D G+ + + M + C
Sbjct: 746 DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T + + + G G+++ +E S G P++ ++ L+DS+GK G ++ +
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E MQ+ IVTYN ++ +AG L E L M P VT L+ G
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ S + + I+ D + F L+++ G++ E + + M++ G P VT
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 311 YRTMVRAYSTNGMKNHA 327
Y ++ G + A
Sbjct: 986 YNVLIDILGRAGKVHEA 1002
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + A +F+AM + C + ++++L+ + G+ G ++A+ E+ + C
Sbjct: 782 VLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN-SISKGCT 840
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V YS LI S K D+ L +M + PN VTYN L+ +A E
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PD+ T N + G G +D E +++ + GI P + TF L++S GK
Sbjct: 901 LEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M++ Y+ ++VTYN++ID GRAG + + +F M+ + P +T
Sbjct: 961 VDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020
Query: 241 LCSLVR 246
+ + R
Sbjct: 1021 IGIMKR 1026
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 162/340 (47%), Gaps = 9/340 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A L + M +GC+ + ++++L++++ + +++ SL + M C
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK-GCVA 631
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV+TYS++I K+ D+ + M +G+ P Y TL+ + + + + L +
Sbjct: 632 DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI-DFALQI 690
Query: 122 VKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L E PD + N + S ++D K + ++ I P + T+ LLD GK
Sbjct: 691 FNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGK 750
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ + M + + +V Y ++D G+ G L +FR M +R P VT
Sbjct: 751 SGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVT 810
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ + G G+ E+ F +NS + ++ L+D++G+ + E
Sbjct: 811 YSSLIDSLGKEGRVEE---AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFE 867
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MQ+R C P+ VTY ++ + G N A++ + +EK+
Sbjct: 868 EMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 34/339 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E Q M+ G D +FT L+ A +SG D+A MKN C P+V TY+
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL-RCSPNVVTYTT 362
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
L+ KA ++ + +M P+ + YNTLID G+A A+M L K M
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGE-ADMACGLFKEMKDR 421
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P++ T N + G +G+ + + + G P + T+N L+D GK G +K+
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481
Query: 188 SAVM-------------------------------EYMQKYHYSWTIVTYNIVIDAFGRA 216
A++ EY S +TYN ++ AF
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G + + L +M+ P+ VT +LV G AG+ ++ S+LR ++ V +
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ L+ ++ + E + + M ++GC D TY ++
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E++ LF MV +GC A+ +++ +++ +S D+A + MK +P +
Sbjct: 610 KRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE-GMEPLL 668
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y L+ S +K D + +++ + P+T YN +++ ++ E +
Sbjct: 669 GNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS 728
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M +++ PD++T L G SG+++ + K G +P + + L+D GK G
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ M K +VTY+ +ID+ G+ G +++ Y F S+ P+ S
Sbjct: 789 LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ ++G G ++ + + + V +N L+ + + +LE M++ G
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
C PD VTY ++ GM + A+ +
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESY 935
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++A ++F M +EG + ++ LLS+ + D A + ++ + P
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES-SLVP 701
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+I++ +K+ D+ L+ M Q I P+ TY +L+D G++ E
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM E EPDV + G G++ + P + T++ L+DS GK
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ E + + Y+ +ID+FG+ G + + LF M+ + P+ VT
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ AG+ +L ++ + D V +N L+D G++ E + + M++
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941
Query: 302 RGCKPDKVTYRTMVRA 317
+G PD +T+ +++ +
Sbjct: 942 KGIVPDVITFTSLIES 957
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 5/311 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ Q+F + ++ RSG D A ++ M + P V+T+++LI + +K+ D+
Sbjct: 286 DAQTFRIFVHSFNRSGRLDPAAEPIQEMIKS-GIDPGVHTFTVLIDALVKSGNIDEACKF 344
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ M PN VTY TL++ +A E V+M +C PD N + G
Sbjct: 345 FNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGK 404
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+ D +++ + G+ P++ T+NI++ GKAG + + +++ + T
Sbjct: 405 AGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFT 464
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +ID G+ G QM+ + +++ E ++ + S GH G E + +
Sbjct: 465 YNTLIDVLGKGG---QMDKVLAIIK-EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPS 520
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
L + +N L+ A+ E +LEVM++ C P VTY T+V G +
Sbjct: 521 LGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD 580
Query: 326 HAKEFQDLVEK 336
A +EK
Sbjct: 581 EAVSLLREMEK 591
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 1/322 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L + M C ++T L+ G++G D+A SLL M+ C+P V TYS
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ-GCEPSVVTYSS 603
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S K ++ +L +M +G + TY+ +I+ ++ + +M E
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP + L + +ID + + + Q + + P +NI+++ K+ ++
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M+ + + TY ++D G++G L++ +F M E +P V SL+
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK + R + + D V ++ L+D+ G+ E E +GC P+
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNV 843
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
Y +++ ++ GM + A E
Sbjct: 844 GVYSSLIDSFGKKGMVDRALEL 865
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 1/302 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L+SA+ +G D+A LLE MK +C P V TY+ L+ KA D+ +LL +
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKH-ECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M QG P+ VTY++L+ ++ + E +M+ + C DV T + + S
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + + + G++P + + LL S K + + +Q+ YNI
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++ ++ + + L M+++ I P T SL+ G +G+ E+ ++ +
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D V + L+D G+ + + M ++ C PD VTY +++ + G A
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 329 EF 330
F
Sbjct: 829 YF 830
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 131/302 (43%), Gaps = 1/302 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L ++ + ++ AM EG + T+LL +G + A + MK+ C P
Sbjct: 192 LAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSF-GCNP 250
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
N Y+ +++ +K + + + I+P+ T+ + ++ R+ +
Sbjct: 251 STNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPI 310
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ +P V T + A SG ID K + ++ P++ T+ L++ KA
Sbjct: 311 QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKA 370
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ V M++ + S + YN +ID G+AG+ LF+ M+ + P+ T
Sbjct: 371 GRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTY 430
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ G AG+ + + + + D +N L+D G+ ++ +++ M +
Sbjct: 431 NIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVE 490
Query: 302 RG 303
+G
Sbjct: 491 KG 492
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 156/359 (43%), Gaps = 46/359 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A LF+ M D G N +++ ++S G++G +A+ L +K P
Sbjct: 402 LGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ-GAVP 460
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQG----IRPNT------------------- 98
DV TY+ LI K DKV A++ +M +G I ++
Sbjct: 461 DVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPS 520
Query: 99 --------VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+TYNTL+ A+ E L M +C P V T + G +G++D
Sbjct: 521 LGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD 580
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ + G +PS+ T++ L+ S+ K E+ ++ + M + + TY++VI
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSC----VTLCSLVRAYGHAGKPEKLGSVLRF--- 263
+ ++ D+ Q +F M+ E ++P L SLV K EK+ L+
Sbjct: 641 NCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV-------KDEKIDFALQIFNE 693
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ S ++ DT +N +V+ + E +++ M+ + PD TY +++ +G
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+++IK A D V +L+ M +G R + +L+ +G +
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C P N L G + + K IQP TF I + S+ ++G
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + ++ M K + T+ ++IDA ++G++ + F M++ R P+ VT
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV AG+ E+ V + ++ D + +N L+D G+ G+ + M+ R
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G P+ TY M+ G + A + F DL E+
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 2/209 (0%)
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T ++ + + D + + G + S++ LL ++G + +
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ + + + YN V++ + G +F + RI+P T V ++ +G
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + ++ + S I F L+DA + E M+ C P+ VTY
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
T+V + G A E VE + C
Sbjct: 362 TLVNGLAKAGRLEEACEV--FVEMKENNC 388
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 155/334 (46%), Gaps = 1/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ E+A + + M + GC + ++ +L+SAY + GL ++A L + M+ +PD
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR-GMKPD 360
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI + D A S+M G PN TYN LI +G F EM +
Sbjct: 361 VVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ S PDV T N L FG +G + +++ + AG P +T+ L+ SY + G
Sbjct: 421 DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 480
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + + M + I TYN V+ A R G Q E LF M KP ++
Sbjct: 481 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYS 540
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A K +K+ ++ I I LV ++ +E + + +++R
Sbjct: 541 SLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRR 600
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
C D MV Y N M +E L+++
Sbjct: 601 RCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKE 634
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 159/324 (49%), Gaps = 1/324 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD+A + + M PD++TY+ ++ +
Sbjct: 453 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA-GIYPDISTYNAVLSAL 511
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ + + + L ++M + +P+ ++Y++L+ AY AK +M+ + ++ EP
Sbjct: 512 ARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHN 571
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
W + + + EK +++ + IN N ++ YGK +K+ V+
Sbjct: 572 WLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTL 631
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ + + TYN ++ + R GD ++ E + ++S ++P + +++ AYG G+
Sbjct: 632 MKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQ 691
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S + D V +N + +Y F E ++ + +GCKP++ TY +
Sbjct: 692 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNS 751
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKM 337
++ Y +G AK F + K+
Sbjct: 752 ILEGYCRHGRMVEAKSFLSNLPKI 775
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 148/306 (48%), Gaps = 1/306 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L +M ++G + + ++ L+S R GL+ +A + + MK +PD T++ L+
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMK-AAGFEPDKVTFNSLLDVY 301
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
KA ++ +L M G P+ VTYN+LI AY + + E +M +PDV
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + G+ID Y + G P++ T+N L+ +G G F +M V +
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ Y +VT+N ++ FG+ G ++ +F+ M+ P T SL+ +Y G
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + + + I D +N ++ A R + + + + M+ R CKPD+++Y +
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 314 MVRAYS 319
++ AY+
Sbjct: 542 LLHAYA 547
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK-AFAFDKVQA 84
+ ++TAL+S + R+G F A ++ M + QP + TY++++ K + + +V
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDG-GVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+ M GI + TYNTLI R ++ E +M + EPD T N L +G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + + +K ++AG PS+ T+N L+ +Y K G E+ + + M+ +V
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I R G + + M P+ T +L++ +G GK ++ V +
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++ +YS G+
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482
Query: 325 NHAKE-FQDLVE 335
+ A E ++ ++E
Sbjct: 483 DQAMEIYKRMIE 494
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD + Y+ L+ +A F A+ M G++P VTYN ++ Y + + + +
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 121 LVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV + ED E D +T N + G + +++ ++AG +P TFN LLD YG
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ V++ M+ + ++VTYN +I A+ + G L++ L + M +KP V
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ GK + + + + + +N L+ +G F EM V + +
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGM 323
+ G PD VT+ T++ + NG+
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGL 446
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C EK + + G + S+ ++ AYGR G +A L MK + +P
Sbjct: 654 LGDC---EKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKP 709
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
D+ TY+I IKS + F++ L+ + QG +PN TYN++++ Y R E
Sbjct: 710 DIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVE 764
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 155/309 (50%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ KM E
Sbjct: 375 ILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +E+ + + P T+NI+++ G+ H+E +
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVE 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 495 AMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + + + N L++A+G + E VL+ M++ G +PD
Sbjct: 555 AQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDV 614
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 615 ITYTTLMKA 623
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A EL + G + + TAL+SA G +G +A +L + +P
Sbjct: 239 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K ++ + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 299 TRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + Q++G++P + +N+++D++GK
Sbjct: 359 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYN 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
M++ +VT+N +IDA + G + LF MR P T
Sbjct: 419 CLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYN 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G E + ++L + ++ + + + LVD YGR + E +E M+
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHA 563
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 157/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M+ + +PD + Y++
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNV 409
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K + M +GI P+ VT+NTLIDA+ GR AE+ +M
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAEL---FEEMR 466
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C P T N + G + +E + + G+ P+I T+ L+D YG++G ++
Sbjct: 467 ESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYK 526
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + M+++ ++ S + L SL+
Sbjct: 527 EAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLI 586
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 587 NAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 647 PDRKA-RAMLRS 657
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E + M ++G N ++T L+ YGRSG + +A +E MK +
Sbjct: 483 LLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD-GLK 541
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ + + N+LI+A+G + E
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q D + YE+ ++G P
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 170/345 (49%), Gaps = 11/345 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ E AH LF+ M + +++ L++ +G+ G+FD A S L+ M+ D+
Sbjct: 167 RAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQD-RVSGDL 225
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ K + K ++ S + GI P+ V YN++I+ +G+AK+F E L L +
Sbjct: 226 VLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPE 285
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + PD + + L + +G+ + + + T N+++D YG+
Sbjct: 286 MRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDM 345
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K IV+YN ++ +G A + +LFRLM+ + I+ + VT +
Sbjct: 346 AKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + + EK ++++ + N I + + ++ ++ + + + + ++ G
Sbjct: 406 MIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSG 465
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ D+V Y+TM+ AY G+ HAK +KRPD
Sbjct: 466 IEIDQVLYQTMIVAYERAGLVAHAKRL----------LHELKRPD 500
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 160/371 (43%), Gaps = 42/371 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L Q EL+ M +G + + +LLS R + ++ +LL+ +
Sbjct: 95 LLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLS---REPDWQRSLALLDWINEEASY 151
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P V Y+++I++ L+A ++ L +M + + P+ TY+TLI +G+ MF + L
Sbjct: 152 SPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMF-DSAL 210
Query: 120 TLVKMLSED------------------------------------CEPDVWTMNCTLRAF 143
+ ++ + +D PD+ N + F
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVF 270
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G + + ++ G+ P +++ LL Y + G + + +V M + +
Sbjct: 271 GKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDL 330
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T N++ID +G+ K+ + LF MR I+P V+ +L+R YG A + + R
Sbjct: 331 TTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRL 390
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG- 322
+ DI + V +N ++ YG+ + +++ MQ RG +P+ +TY T++ + G
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGK 450
Query: 323 MKNHAKEFQDL 333
+ A FQ L
Sbjct: 451 LDRAAMLFQKL 461
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 5/307 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S++ LLS Y +G + +A S+ M N C
Sbjct: 269 VFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEM-NEVRCP 327
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +++I + + L M GI P V+YNTL+ YG A++F E
Sbjct: 328 LDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHL 387
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N ++ +G S + + ++ Q+ GI+P+ T++ ++ + K
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDK 447
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 448 AGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 503
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F C++D + R + + V + M+
Sbjct: 504 RETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMR 563
Query: 301 QRGCKPD 307
G PD
Sbjct: 564 GAGYFPD 570
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 130/302 (43%), Gaps = 5/302 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + +A LF+ M + + N ++ ++ YG+S +KA +L++ M+N +P+
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNR-GIEPN 434
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS +I KA D+ L + + GI + V Y T+I AY RA + A +
Sbjct: 435 AITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAK---- 490
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++L E PD + +G+I+ + + AG I F ++D + +
Sbjct: 491 RLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNR 550
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ V + M+ Y +V++A G+ + ++ + +++ M E S
Sbjct: 551 KHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHF 610
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ YG G + + S+ +D+ + + Y R + ++ M++R
Sbjct: 611 QMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMRER 670
Query: 303 GC 304
G
Sbjct: 671 GI 672
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 174/378 (46%), Gaps = 40/378 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +K E+F M G S+TA+++AYGR+G F + LL MK
Sbjct: 143 LLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQE-RVS 201
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY+ +I +C + ++ + L ++M +GI+P+ +TYNTL+ A + E E+
Sbjct: 202 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEM 261
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M PD+ T + ++ FG +++ + + + + G P I ++N+LL++Y
Sbjct: 262 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYA 321
Query: 180 KAGHFEKMSAVMEYMQKY------------------HYSWTIV----------------- 204
+ G ++ V MQ H + V
Sbjct: 322 ELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAG 381
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+I FG G K++ LF M E ++P+ T L+ A G G E +L +
Sbjct: 382 TYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ + + +++A+G+ + E + M + G P TY +++ A++ G+
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501
Query: 325 NHAKEFQDLVEKMDETCL 342
KE + ++ +M+E+ L
Sbjct: 502 ---KEAEAILSRMNESGL 516
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 9 EKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+++ LF+ M + C N T +++ GR GL DK + + M + + V +Y+
Sbjct: 115 QRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVR-TVYSYT 173
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-VKMLS 126
+I + + F LL+ M + + P+ +TYNT+I+A R + E L L +M
Sbjct: 174 AIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRH 233
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +PDV T N L A + G D E + +GI P INT++ L+ ++GK EK
Sbjct: 234 EGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEK 293
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+S ++ M+ I +YN++++A+ G +K+ +FR M++ + T L+
Sbjct: 294 VSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLN 353
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG G+ + + + + S+ D +N L+ +G F E+ + M + +P
Sbjct: 354 LYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEP 413
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
+ TY ++ A G+ AK+
Sbjct: 414 NMQTYEGLIFACGKGGLYEDAKKI 437
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 162/337 (48%), Gaps = 5/337 (1%)
Query: 1 MLGKCKQ---PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+LG C ++A +F+ M + G + +++ L+ +G+ +K LL M+
Sbjct: 246 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGG 305
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ PD+ +Y++L+++ + + + + M G N TY+ L++ YG+ + ++
Sbjct: 306 NL-PDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDV 364
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++M + +PD T N ++ FG G + + ++P++ T+ L+ +
Sbjct: 365 RDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFA 424
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GK G +E ++ +M + + Y VI+AFG+A ++ +F M P+
Sbjct: 425 CGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPT 484
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T SL+ A+ G ++ ++L ++ S + D FN +++A+ + + E
Sbjct: 485 VETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYV 544
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
M++ C+P+++T ++ Y + G+ + +E FQ++
Sbjct: 545 EMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEI 581
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T+ L A G I +C + F++ + S+N F ++ + + G +++ +
Sbjct: 68 DVETLINRLTALPPRGSI---ARCLDPFKN---KLSLNDFALVFKEFAQRGDWQRSLRLF 121
Query: 192 EYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+YMQ+ + + I+I GR G L + +F M S + + + +++ AYG
Sbjct: 122 KYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGR 181
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKV 309
G+ +L + + + +N +++A R E + G+ M+ G +PD +
Sbjct: 182 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 241
Query: 310 TYRTMVRAYSTNGMKNHAK 328
TY T++ A + G+ + A+
Sbjct: 242 TYNTLLGACAHRGLGDEAE 260
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ E+A +F M + G + +++ +L+ A+ R GL+ +A ++L M N +
Sbjct: 460 FGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRM-NESGLKR 518
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV++++ +I++ + +++ +M PN +T ++ Y
Sbjct: 519 DVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIY------------- 565
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
C+ +G +D E+ +++ +++GI PS+ + ++L Y K
Sbjct: 566 ----------------CS------AGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKN 603
Query: 182 GHFEKMSAVMEYMQKYHYS-WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+++ M S V ++ F + + +EY+F + SE
Sbjct: 604 DRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSE 655
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 155/309 (50%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ KM E
Sbjct: 375 ILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +E+ + + P T+NI+++ G+ H+E +
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVE 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 495 AMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + + + N L++A+G + E VL+ M++ G +PD
Sbjct: 555 AQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDV 614
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 615 ITYTTLMKA 623
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A EL + G + + TAL+SA G +G +A +L + +P
Sbjct: 239 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K ++ + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 299 TRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + Q++G++P + +N+++D++GK
Sbjct: 359 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYN 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
M++ +VT+N +IDA + G + LF MR P T
Sbjct: 419 CLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYN 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G E + ++L + ++ + + + LVD YGR + E +E M+
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHA 563
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 157/312 (50%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M+ + +PD + Y++
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNV 409
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K + M +GI P+ VT+NTLIDA+ GR AE+ +M
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAEL---FEEMR 466
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C P T N + G + +E + + G+ P+I T+ L+D YG++G ++
Sbjct: 467 ESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYK 526
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + M+++ ++ S + L SL+
Sbjct: 527 EAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLI 586
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 587 NAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 647 PDRKA-RAMLRS 657
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E + M ++G N ++T L+ YGRSG + +A +E MK +
Sbjct: 483 LLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD-GLK 541
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ + + N+LI+A+G + E
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q D + YE+ ++G P
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 4/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q A E+F + D Q + A++ Y R+G F+K +L+ M+ C+
Sbjct: 185 VLGKANQEALAVEIF-IRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRER-GCE 242
Query: 61 PDVNTYSILIKSCLKAFAFDKVQA--LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ +++ LI + LKA A A LL+++ G+RP+ +TYNTLI A R E
Sbjct: 243 PDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAV 302
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M + C+PD+WT N + +G G E+ +++ +S G P T+N LL ++
Sbjct: 303 KVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAF 362
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G+ +K+ + M + + +TYN +I +G+ G L+R M+ P
Sbjct: 363 AREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDA 422
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T L+ + G A K + +V+ + N + ++ L+ Y R E + +
Sbjct: 423 ITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDC 482
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
M++ G +PD++ Y M+ +
Sbjct: 483 MRRSGIRPDQLAYSVMLDVF 502
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + + Q + D G + S +L A+ R +A + + MK P ++ Y I
Sbjct: 822 EELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMK-AAGYFPTMHLYRI 880
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K V+A++++M G RP+ +N+++ Y F + ++ +
Sbjct: 881 MIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDG 940
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T N + + + + + + G++P ++T+ L+ ++GK
Sbjct: 941 LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAE 1000
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E + Y+I++ + +G+ + E L +M+ ++P+ T+ L+ +Y
Sbjct: 1001 ELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSY 1060
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G +G+P++ VL + + L T+ ++ ++DAY + K ++ L M++ G +PD
Sbjct: 1061 GSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDH 1120
Query: 309 VTYRTMVRAYS 319
+ +RA S
Sbjct: 1121 RIWTCFIRAAS 1131
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ + M + G + + ++L Y F K + + +K Q
Sbjct: 884 LLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKED-GLQ 942
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +TY+ LI + ++ +L+ +M G+ P TY +LI A+G+ ++ + E
Sbjct: 943 PDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEEL 1002
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++LS+ + D + ++ + NSG EK + AG++P+I T ++L+ SYG
Sbjct: 1003 FEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGS 1062
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G ++ V+ +++ S + + Y+ VIDA+ + D M+ E ++P
Sbjct: 1063 SGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRI 1122
Query: 241 LCSLVRA 247
+RA
Sbjct: 1123 WTCFIRA 1129
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 149/338 (44%), Gaps = 8/338 (2%)
Query: 5 CKQPE---KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLE--HMKNTPDC 59
C++ E +A ++F M G + + +++ Y + G + A L++ ++ P
Sbjct: 674 CEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFD 733
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+ ++ I LK + K ++L+ ++ + + +N LI AY + + +
Sbjct: 734 KISIDVAVIETYGKLKLW--QKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARA 791
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+ + P V ++N L+A G+++ + ++ Q G Q S ++ ++LD++
Sbjct: 792 VFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFA 851
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ + + + + M+ Y T+ Y I+I + ++ +E + M +P
Sbjct: 852 RVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLS 911
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
S++R Y K + + I + D +N L+ Y R E ++ M
Sbjct: 912 IWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEM 971
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
++ G +P TY++++ A+ + A+E F++L+ K
Sbjct: 972 RRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSK 1009
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN T++ G+A A + + + + V N + + +G+ + ++
Sbjct: 174 PNARMLATILAVLGKANQEA-LAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGM 232
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV--MEYMQKYHYSWTIVTYNIVIDAF 213
+ + G +P + +FN L+++ KAG A+ + +++ I+TYN +I A
Sbjct: 233 LDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISAC 292
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R +L++ +F M + +P T +++ YG G K + + +++ D
Sbjct: 293 SRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDA 352
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V +N L+ A+ R ++K + M Q G D++TY T++ Y G A
Sbjct: 353 VTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLA 406
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/292 (17%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL--------------------- 104
Y LI+ C + + + SDM G++P+ Y ++
Sbjct: 667 YESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAE 726
Query: 105 ---------------IDAYGRAKMFAEMELTLVKMLSEDC---EPDVWTMNCTLRAFGNS 146
I+ YG+ K++ + E +LV L + C + VW N ++A+ S
Sbjct: 727 IEGMPFDKISIDVAVIETYGKLKLWQKAE-SLVGNLRQRCTNVDRKVW--NALIQAYAAS 783
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + G P++++ N LL + G E++ V + +Q + + +
Sbjct: 784 GCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSI 843
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++DAF R ++ + + +++ M++ P+ ++ + + +++ ++
Sbjct: 844 LLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEE 903
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D +N ++ Y + F + + + +++ G +PD+ TY T++ Y
Sbjct: 904 AGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY 955
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 168/341 (49%), Gaps = 8/341 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K + E+A +L +M+ +GC N S+ +++ ++ + LLE M + +C
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN-NCV 427
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T++ +I + K + D L + + G PN VTYN+L+ +++ F + E
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + C PD+ T N + S ++D K + + S G+ P T++I++ S
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++ + V+E M K + +TY +ID F + G+L + + +L+ S+ P V
Sbjct: 548 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 607
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + G+ + G +L + + ++ DTV +N L+ + + + EVM
Sbjct: 608 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+Q GC+PD TY T+V G K ++DL+ ++ ++
Sbjct: 668 RQCGCEPDNATYTTLV------GHLVDKKSYKDLLAEVSKS 702
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A EL + M + G N ++ ++ D A L + M+ + C PDV TYS
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYST 225
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ S +K+ D L+ M ++G PN VTY++L+ +A E L +M
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P++ T N + G+ID E+ G QP++ T+ +LLD++ K G E
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 345
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M + Y + TYN ++D F + ++++ L M + P+ V+ +++
Sbjct: 346 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
A K + +L + +++ + D V FN ++DA + + ++Q+ GC P+
Sbjct: 406 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 465
Query: 309 VTYRTMVRA 317
VTY ++V
Sbjct: 466 VTYNSLVHG 474
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 5/319 (1%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M G C ++ + A +LF+ M + G C + +++ ++ + +SG D A L+E M +
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV-SK 249
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C P+V TYS L+ KA D+ ALL M+ G PN VTYNT+ID + + E
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +M+ C+P+V T L AF G+ + E G P++ T+N LLD
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K E+ ++ M + +V+YN VI +A + + L M S P
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL- 296
VT +++ A + + + I S + V +N LV + + F + + +L
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489
Query: 297 EVMQQRGCKPDKVTYRTMV 315
E+ +++GC PD +TY T++
Sbjct: 490 EMTRKQGCSPDIITYNTVI 508
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 47/355 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPD 58
L K + + A L + MVD G N S+ +L + ++ + A LLE M PD
Sbjct: 54 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD 113
Query: 59 -------------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLS 87
CQP+V TY L+ + D L+
Sbjct: 114 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 173
Query: 88 DMSTQGIRPNTVTYNTLIDAY--GRA-----KMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
M+ +G RPN +TYN ++ GR ++F EME S C PDV+T + +
Sbjct: 174 KMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME------ESGSCPPDVFTYSTIV 227
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ SG++D + E S G P++ T++ LL KAG ++ +A+++ M + S
Sbjct: 228 DSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 287
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
IVTYN +ID + G + + +L M +P+ VT L+ A+ GK E +
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + + +N L+D + + +L M Q+GC P+ V+Y T++
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 145/358 (40%), Gaps = 41/358 (11%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M +G A+ ++L +G A M T C PD TY+ +I K+
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMINGLSKSD 58
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
D LL +M G PN +YNT++ + +A L +M+ C PDV +
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ Q+D + +K G QP++ T+ L+D + + G + ++ M +
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 198 HYSWTIVTYN------------------------------------IVIDAFGRAGDLKQ 221
Y +TYN ++D+ ++G +
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
L M S+ P+ VT SL+ AGK ++ ++L+ + S + V +N ++D
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ +L E +LE M GC+P+ VTY ++ A+ G A++ LVE M E
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG---KAEDAIGLVEVMVE 353
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 5/265 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+ELF + + GC N ++ +L+ +S FD+A LL M C PD+ TY+ +I
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ D+ L M + G+ P+ VTY+ +I + + + E L ML +
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P T + F +G +D + + S G P + TF+I +D K G + +
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M + VTYN ++ F A + LF +MR +P T +LV GH
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV---GH 685
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVF 275
+ +L + S M+DT F
Sbjct: 686 LVDKKSYKDLLAEVSKS--MVDTGF 708
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 152/318 (47%), Gaps = 2/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C NT+++T +++ YG+S A + + M++ C+
Sbjct: 59 LLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSI-GCKA 117
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA
Sbjct: 118 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIF 177
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G E +E + G+ P++ + +LL ++ ++
Sbjct: 178 SLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARS 237
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ + VM + K + + N +++A+GRAG L ME L M R T
Sbjct: 238 GNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAM-ERRGTRDVGTY 296
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
V AYG AG E++ + ++ + D V + + AY R K + + E M
Sbjct: 297 NVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVD 356
Query: 302 RGCKPDKVTYRTMVRAYS 319
GC PD T + +V A S
Sbjct: 357 AGCYPDAGTAKVLVAACS 374
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 151/309 (48%), Gaps = 2/309 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
++ A+++ C ++ LL AY +G +A ++ M+ P Y+ +
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREH-GIPPSATVYNAYLDGL 59
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
LKA +K + M + R NT TY +I+ YG++K +M S C+ ++
Sbjct: 60 LKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANI 119
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG + S +
Sbjct: 120 CTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSL 179
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
MQ +YNI++DA+GRAG ++ E +F ++ + + P+ + L+ A+ +G
Sbjct: 180 MQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGN 239
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ V+ + S + DT+ N +++AYGR +M+ +L M++RG + D TY
Sbjct: 240 VARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNV 298
Query: 314 MVRAYSTNG 322
V AY G
Sbjct: 299 AVNAYGRAG 307
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 37/307 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK KQP A ++F+ M GC AN ++TAL++A+ R GL +KA + E M+ +PD
Sbjct: 95 GKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPD 153
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ L+++ +A + S M G P+ +YN L+DAYGRA + E E
Sbjct: 154 VYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFE 213
Query: 123 KMLSED-----------------------CE------------PDVWTMNCTLRAFGNSG 147
+ + CE PD +N L A+G +G
Sbjct: 214 SLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAG 273
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D ME+ + G + + T+N+ +++YG+AG+ E+M A +++ + +VT+
Sbjct: 274 RLDDMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWT 332
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ A+ R + ++ +F M P T LV A + E++ +++R +
Sbjct: 333 SRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQVTAIVRSMHKE 392
Query: 268 DIMLDTV 274
L T+
Sbjct: 393 AKTLFTI 399
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+L C P T LRA+ +G + E + + GI PS +N LD KA
Sbjct: 5 LLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARC 64
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
EK V + M++ TY ++I+ +G++ +F+ M+S K + T +
Sbjct: 65 AEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTA 124
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV A+ G EK V + + D +N L++AY R + +MQ G
Sbjct: 125 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMG 184
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAK 328
C+PD+ +Y +V AY G+ A+
Sbjct: 185 CEPDRASYNILVDAYGRAGLHREAE 209
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
Y A P+ +T+ +LL +Y AG + V+ M+++ + YN +D +
Sbjct: 2 YAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLK 61
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A ++ +++ M+ ER + + T ++ YG + +P V + + + +
Sbjct: 62 ARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICT 121
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ LV+A+ R + + V E MQQ G +PD Y ++ AYS G A E L++
Sbjct: 122 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQ 181
Query: 336 KM 337
M
Sbjct: 182 HM 183
>gi|357138098|ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Brachypodium distachyon]
Length = 519
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 6/329 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + +L+ A+ +S KA + MK
Sbjct: 121 VMGKKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFDKMKTI 180
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP++ TY+IL+++C +A +V+ L D+ + P+ TYN +ID YG+ M E
Sbjct: 181 ERCQPNIVTYNILLRACARASDAKQVEILFKDLDESLVTPDIYTYNGVIDGYGKNGMIKE 240
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S+ C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 241 MESVLVRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMIT 300
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIK 235
+YGKA EK +V+E M + + + VT +I + + + + +F L+ S+
Sbjct: 301 NYGKARLKEKAESVLEKMDELGFKPSYVTQECLIMMYAYCDCVSKAQQIFDELVNSQSTV 360
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P +L +++ AY P + +L ++ + L AY R ++ +
Sbjct: 361 P-LSSLNAMLDAYCMNRLPMEADRLLDAAIEKGVVPGASTYKLLYKAYTRANDKVLVQKL 419
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
L M ++G P+K + + A+ T+ K
Sbjct: 420 LGRMNKQGIVPNKKFFLDALEAFGTSANK 448
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 5/305 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR + + + M+ D YS LI K L S M
Sbjct: 82 LFEELGRHDGWVQCLEIFRWMQKQRWYVADNGIYSKLISVMGKKGQIRMAMWLFSQMRNS 141
Query: 93 GIRPNTVTYNTLIDAY----GRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
G +P+T YN+LI A+ ++K A+ KM + E C+P++ T N LRA +
Sbjct: 142 GCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFDKMKTIERCQPNIVTYNILLRACARAS 201
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E ++ + + P I T+N ++D YGK G ++M +V+ M+ ++T+N
Sbjct: 202 DAKQVEILFKDLDESLVTPDIYTYNGVIDGYGKNGMIKEMESVLVRMKSKQCRPDVITFN 261
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+ID++GR +ME +F+ + + +P+ T S++ YG A EK SVL +D
Sbjct: 262 ILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLKEKAESVLEKMDEL 321
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V CL+ Y C ++ + + + + + M+ AY N + A
Sbjct: 322 GFKPSYVTQECLIMMYAYCDCVSKAQQIFDELVNSQSTVPLSSLNAMLDAYCMNRLPMEA 381
Query: 328 KEFQD 332
D
Sbjct: 382 DRLLD 386
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY----------GKA-GHFEKMS 188
+ G GQI + + +++G +P + +N L+ ++ KA G+F+KM
Sbjct: 119 ISVMGKKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFDKMK 178
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E Q IVTYNI++ A RA D KQ+E LF+ + + P T ++ Y
Sbjct: 179 TI-ERCQP-----NIVTYNILLRACARASDAKQVEILFKDLDESLVTPDIYTYNGVIDGY 232
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G +++ SVL + + D + FN L+D+YGR + F +M+ V + + + +P
Sbjct: 233 GKNGMIKEMESVLVRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTH 292
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ +M+ Y +K A + ++EKMDE
Sbjct: 293 PTFNSMITNYGKARLKEKA---ESVLEKMDE 320
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 157/327 (48%), Gaps = 8/327 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +Q KA ++ A+++ C ++ LL AY SG +A ++ M+ P
Sbjct: 176 GQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKN-GLPPT 234
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA +K + M + R NT TY +I+ YG+AK
Sbjct: 235 ATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFN 294
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + C+P++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 295 EMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 354
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + M+ +YNI++DA+GRAG ++ E F+ ++ + ++P+ +
Sbjct: 355 LPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHM 414
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ- 301
L+ A+ +G + V+ + S + DT N +++AYGR +M+ +L M++
Sbjct: 415 LLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERG 474
Query: 302 ------RGCKPDKVTYRTMVRAYSTNG 322
G PD TY +V Y G
Sbjct: 475 GDDDAGGGAAPDTSTYNVLVNVYGRAG 501
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EKA E++Q M E C NT+++T +++ YG++ + + MK T C+P
Sbjct: 245 LLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMK-TIGCKP 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ + + +K + + +M G P+ YN L++AY RA +
Sbjct: 304 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 363
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD + N + A+G +G E +++ + G++P++ + +LL ++ K+
Sbjct: 364 SLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKS 423
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR-------SERI 234
G+ + VM + K N +++A+GRAG L ME L M
Sbjct: 424 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGA 483
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P T LV YG AG +++ + R + + D V + + AY R K +
Sbjct: 484 APDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLE 543
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYS 319
+ E M GC PD T + ++ A S
Sbjct: 544 IFEEMVDAGCYPDAGTAKVLLAACS 568
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LIDAYG+ + + E + +L C P T LRA+ NSGQ+ E
Sbjct: 162 RPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEG 221
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q G+ P+ +N LD KA EK V + M+K TY ++I+ +G
Sbjct: 222 VISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYG 281
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A +F M++ KP+ T +LV A+ G EK V + + D
Sbjct: 282 KAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 341
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDL 333
+N L++AY R + +M+ GC+PD+ +Y +V AY G+ A+ FQ+L
Sbjct: 342 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQEL 401
Query: 334 VEK 336
++
Sbjct: 402 KQQ 404
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ M G + + ++ AL+ AY R+GL A FSL+EHM C+PD +
Sbjct: 322 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM----GCEPDRAS 377
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+IL+ + +A + +A ++ QG+RP ++ L+ A+ ++ A E + ++
Sbjct: 378 YNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLH 437
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-------SAGIQPSINTFNILLDSY 178
PD + +N L A+G +G++D ME+ + G P +T+N+L++ Y
Sbjct: 438 KSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVY 497
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G+AG+ ++M A + + +VT+ I A+ R + + +F M P
Sbjct: 498 GRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDA 557
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLR 262
T L+ A + E++ +++R
Sbjct: 558 GTAKVLLAACSDERQVEQVTAIVR 581
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ AYG+ +KA S+ + C P +TY++L+++ + + + ++S+M
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEA-HCVPTEDTYALLLRAYCNSGQLHRAEGVISEM 226
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+ P YN +D +A+ + +M E C + T + +G + Q
Sbjct: 227 QKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQP 286
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ K + + ++ G +P+I T+ L++++ + G EK V E MQ+ + + YN +
Sbjct: 287 MSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 346
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++A+ RAG + +F LM +P + LV AYG AG ++ + + + +
Sbjct: 347 MEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGM 406
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
L+ A+ + A + V+ + + G +PD M+ AY G
Sbjct: 407 RPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAG 459
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 43/231 (18%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P+ A E+F M GC+ + S+ L+ AYGR+GL +A + + +K +P + ++
Sbjct: 356 PQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQ-GMRPTMKSHM 414
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV---------------------------- 99
+L+ + K+ + + +++ + G+RP+T
Sbjct: 415 LLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERG 474
Query: 100 --------------TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
TYN L++ YGRA ME + + DV T + A+
Sbjct: 475 GDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYAR 534
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ + +E+ AG P T +LL + E+++A++ M K
Sbjct: 535 KKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHK 585
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 93/243 (38%), Gaps = 37/243 (15%)
Query: 132 DVW--TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK--------- 180
D+W +N ++ N + C + +P I +N+L+D+YG+
Sbjct: 127 DLWDDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAES 186
Query: 181 --------------------------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+G + V+ MQK T YN +D
Sbjct: 187 IYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLL 246
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+A ++ +++ M+ ER + + T ++ YG A +P V + +
Sbjct: 247 KARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNIC 306
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ LV+A+ R + + V E MQQ G +PD Y ++ AYS G+ A E L+
Sbjct: 307 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 366
Query: 335 EKM 337
E M
Sbjct: 367 EHM 369
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 152/332 (45%), Gaps = 1/332 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ E+A + + M + GC + ++ +L+SAY + GL ++A L + M+ +PD
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR-GMKPD 359
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI + D A S+M G PN TYN LI +G F EM
Sbjct: 360 VVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFD 419
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ S PDV T N L FG +G + +++ + AG P +T+ L+ SY + G
Sbjct: 420 DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 479
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + + M + I TYN V+ A R G +Q E LF M KP ++
Sbjct: 480 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYS 539
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A K +K+ ++ I I LV ++ E + + +++R
Sbjct: 540 SLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRR 599
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
C D MV Y N M +E L+
Sbjct: 600 RCSLDINVLNAMVSIYGKNKMVKKVEEVLSLM 631
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD+A + + M PD++TY+ ++ +
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA-GIYPDISTYNAVLSAL 510
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M + +P+ ++Y++L+ AY AK +M+ + +E E
Sbjct: 511 ARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHN 570
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
W + + + EK +++ + IN N ++ YGK +K+ V+
Sbjct: 571 WLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSL 630
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + + + TYN ++ + R GD ++ E + ++S ++P + +++ AYG G+
Sbjct: 631 MMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQ 690
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S + D V +N + +Y F E ++ + +GC+P++ T+ +
Sbjct: 691 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNS 750
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKM 337
+++ YS +G AK F + K+
Sbjct: 751 ILQGYSRHGRMVEAKSFLSNLPKI 774
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK- 75
A+++ + ++TAL+SA+ R+G F A ++ + M + QP + TY+++ + K
Sbjct: 174 AILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDG-GVQPALVTYNVVFHAYSKM 232
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
+ + +V AL+ M GI + TYNTLI R + E +M + EPD T
Sbjct: 233 SVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVT 292
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N L +G + + + ++ ++AG PS+ T+N L+ +Y K G E+ + + M+
Sbjct: 293 FNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEME 352
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+VTY +I R G + + M P+ T +L++ +G GK
Sbjct: 353 FRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFT 412
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++ +V + ++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++
Sbjct: 413 EMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 472
Query: 316 RAYSTNGMKNHAKE-FQDLVE 335
+YS G+ + A E ++ ++E
Sbjct: 473 SSYSRCGLFDQAMEIYKRMIE 493
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 1/306 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L +M ++G + + ++ L+S R GL +A + + MK +PD T++ L+
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMK-AAGFEPDKVTFNSLLDVY 300
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
KA ++ +L M G P+ VTYN+LI AY + + E +M +PDV
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + G+ID Y + G P++ T+N L+ +G G F +M AV +
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ Y +VT+N ++ FG+ G ++ +F+ M+ P T SL+ +Y G
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + + + I D +N ++ A R + + + + M R CKPD+++Y +
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540
Query: 314 MVRAYS 319
++ AY+
Sbjct: 541 LLHAYA 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 8/336 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+FQ MVD G ++ + AY + + + + +L++ MK + D TY+ LI
Sbjct: 206 VFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKED-GIERDRYTYNTLISC 264
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
C + + + +M G P+ VT+N+L+D YG+A+ E L +M + C P
Sbjct: 265 CRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPS 324
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T N + A+ G ++ + ++ + G++P + T+ L+ + G + A
Sbjct: 325 VVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYS 384
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + S + TYN +I G G +M +F +RS P VT +L+ +G G
Sbjct: 385 EMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNG 444
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ V + + + + + + L+ +Y R F + + + M + G PD TY
Sbjct: 445 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
++ A + G A++ E +D C +PD
Sbjct: 505 AVLSALARGGRWEQAEKL--FAEMVDRDC----KPD 534
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 6/291 (2%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
+ + R+G +A ++LE PD + Y+ L+ + +A F A+ M G
Sbjct: 160 IRVFARAGCLAEASAILEAAP-----APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGG 214
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTM 152
++P VTYN + AY + + + + LV + ED E D +T N + G
Sbjct: 215 VQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREA 274
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ +++ ++AG +P TFN LLD YGKA E+ V++ M+ + ++VTYN +I A
Sbjct: 275 AQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISA 334
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ + G L++ L + M +KP VT +L+ GK + + + + +
Sbjct: 335 YVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPN 394
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+N L+ +G F EM V + ++ G PD VT+ T++ + NG+
Sbjct: 395 LCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGL 445
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C EK + + G + S+ ++ AYGR G +A L MK + +P
Sbjct: 653 LGDC---EKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKP 708
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
D+ TY+I IKS + F++ L+ + TQG RPN T+N+++ Y R E
Sbjct: 709 DIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVE 763
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 159/319 (49%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + DEG A+ + ++ A GR G D LL+ M P + DV Y+
Sbjct: 127 EWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 185
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + +A +++ L +++ QG+ P VTYN ++D YGR + + + L +M +
Sbjct: 186 VLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAA 245
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 246 GVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEA 305
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+ VTYN + + RAG ++ M S+ + P+ T +++ A
Sbjct: 306 LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + G+ ++ ++ + + + + +N + G+ F M +LE M + GC P+
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ TM+ GM+++
Sbjct: 426 RVTWNTMLAVCGKRGMEDY 444
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + E+A +LF + +G ++ +L YGR G + + +LLE M+ +
Sbjct: 190 LSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR-AAGVE 248
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T S +I +C + D+ A D+ +G P VTYN L+ +G+A + E
Sbjct: 249 PDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV 308
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C+PD T N + +G + KC + S G+ P+ T+N ++ +Y
Sbjct: 309 LKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 368
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ A+ + M+K Y + TYN++ G+ M + M P+ VT
Sbjct: 369 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 428
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G + + VL + + + L +N L+ AYGR + + M
Sbjct: 429 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 488
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY ++ S G + A Q +V KM
Sbjct: 489 SSGFTPCLTTYNALLNVLSRQGDWSTA---QSIVSKM 522
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D GC + ++ L Y R+G F++A L+ M +
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM-TSKGLL 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + D+ AL M G PN TYN + G+ F M
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G D + + +S G++ S +T+N L+ +YG+
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M ++ + TYN +++ R GD + + M KP+ +
Sbjct: 474 CGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQS 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ Y G + S+ + + I V LV A + + ++ + ++
Sbjct: 534 YSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G KPD V + +M+ Y+ NG+ + A E D +++
Sbjct: 594 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQ 629
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M +G NT ++ +++AY G D+A +L + MK P+VNTY++
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN-GYVPNVNTYNL 396
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K F + +L +MS G PN VT+NT++ G+ M + L M S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCG 456
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E T N + A+G G K Y++ S+G P + T+N LL+ + G +
Sbjct: 457 VELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 516
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M K + +Y++++ + + G+ +E + + + I PS V L +LV A
Sbjct: 517 SIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIAN 576
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E + + + D V FN ++ Y + +++ + + ++Q G PD
Sbjct: 577 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 636
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+TY +++ Y+ + N + E + +++++ + + +PD
Sbjct: 637 ITYNSLMDMYAKS---NESWEAEKILKQLKSSQV---KPD 670
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 160/337 (47%), Gaps = 1/337 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + M G + + ++ L+SAYGR G AF + + M ++ P
Sbjct: 437 GKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-GFTPC 495
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ + + Q+++S M G +PN +Y+ L+ Y + A +E
Sbjct: 496 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ P + + A +++ +EK +++ ++ G +P + FN +L Y K G
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K + + + +++ S ++TYN ++D + ++ + + E + + ++S ++KP V+
Sbjct: 616 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 675
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + G ++ +L + + V ++ LV Y L+ F E + V+ M
Sbjct: 676 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 735
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KP ++TYR +V +Y + A+EF + D+
Sbjct: 736 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQ 772
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 159/319 (49%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + DEG A+ + ++ A GR G D LL+ M P + DV Y+
Sbjct: 127 EWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 185
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + +A +++ L +++ QG+ P VTYN ++D YGR + + + L +M +
Sbjct: 186 VLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAA 245
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 246 GVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEA 305
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+ VTYN + + RAG ++ M S+ + P+ T +++ A
Sbjct: 306 LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + G+ ++ ++ + + + + +N + G+ F M +LE M + GC P+
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ TM+ GM+++
Sbjct: 426 RVTWNTMLAVCGKRGMEDY 444
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + E+A +LF + +G ++ +L YGR G + + +LLE M+ +
Sbjct: 190 LSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR-AAGVE 248
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T S +I +C + D+ A D+ +G P VTYN L+ +G+A + E
Sbjct: 249 PDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV 308
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C+PD T N + +G + KC + S G+ P+ T+N ++ +Y
Sbjct: 309 LKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 368
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ A+ + M+K Y + TYN++ G+ M + M P+ VT
Sbjct: 369 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 428
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G + + VL + + + L +N L+ AYGR + + M
Sbjct: 429 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 488
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY ++ S G + A Q +V KM
Sbjct: 489 SSGFTPCLTTYNALLNVLSRQGDWSTA---QSIVSKM 522
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D GC + ++ L Y R+G F++A L+ M +
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM-TSKGLL 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + D+ AL M G PN TYN + G+ F M
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G D + + +S G++ S +T+N L+ +YG+
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M ++ + TYN +++ R GD + + M KP+ +
Sbjct: 474 CGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQS 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ Y G + S+ + + I V LV A + + ++ + ++
Sbjct: 534 YSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G KPD V + +M+ Y+ NG+ + A E D +++
Sbjct: 594 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQ 629
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M +G NT ++ +++AY G D+A +L + MK P+VNTY++
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN-GYVPNVNTYNL 396
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K F + +L +MS G PN VT+NT++ G+ M + L M S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCG 456
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E T N + A+G G K Y++ S+G P + T+N LL+ + G +
Sbjct: 457 VELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 516
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M K + +Y++++ + + G+ +E + + + I PS V L +LV A
Sbjct: 517 SIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIAN 576
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E + + + D V FN ++ Y + +++ + + ++Q G PD
Sbjct: 577 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 636
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+TY +++ Y+ + N + E + +++++ + + +PD
Sbjct: 637 ITYNSLMDMYAKS---NESWEAEKILKQLKSSQV---KPD 670
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 160/337 (47%), Gaps = 1/337 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + M G + + ++ L+SAYGR G AF + + M ++ P
Sbjct: 437 GKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-GFTPC 495
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ + + Q+++S M G +PN +Y+ L+ Y + A +E
Sbjct: 496 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ P + + A +++ +EK +++ ++ G +P + FN +L Y K G
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K + + + +++ S ++TYN ++D + ++ + + E + + ++S ++KP V+
Sbjct: 616 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 675
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + G ++ +L + + V ++ LV Y L+ F E + V+ M
Sbjct: 676 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 735
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KP ++TYR +V +Y + A+EF + D+
Sbjct: 736 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQ 772
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 1/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + EG F ++ A GR G D +LL+ M P + DV Y+
Sbjct: 129 EWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTT 188
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + + +++ L ++ +G+ P VTYN ++D YGR + + + L M +
Sbjct: 189 VLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAA 248
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 249 GVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEA 308
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M+ VTYN + ++ RAG ++ M + + P+ T +++ A
Sbjct: 309 LRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTA 368
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
YG+AGK ++ ++ + + + T +N ++ G+ FA M +L M + GC P+
Sbjct: 369 YGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPN 428
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ T++ GM+++
Sbjct: 429 RVTWNTLLAVCGKRGMESY 447
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 152/337 (45%), Gaps = 1/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D GC + ++ L +Y R+G + +A ++ M
Sbjct: 298 VFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGK-GLL 356
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + A D+ AL M G P T TYN ++ G+ FA M
Sbjct: 357 PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G + + E +S ++ +T+N L+ +YG+
Sbjct: 417 LGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGR 476
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M ++ + TYN +++ R GD + M+SE KP+ ++
Sbjct: 477 CGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMS 536
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ + G + ++ + + +I V LV A + + ++ + ++
Sbjct: 537 YSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVK 596
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
RG KPD V +M+ Y+ NG+ + A E + +E++
Sbjct: 597 ARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQL 633
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 5/330 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
E+A LF + EG ++ +L YGR G + + +LL M+ +PD T S
Sbjct: 200 ERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMR-AAGVEPDGFTAS 258
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I + + D+ A D+ +G P VTYN L+ +G+A + E L +M
Sbjct: 259 TVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDA 318
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C+PD T N ++ +G KC + G+ P+ T+N ++ +YG AG ++
Sbjct: 319 GCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEA 378
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A+ + M+K + TYN+V+ G+ M + M P+ VT +L+
Sbjct: 379 LALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAV 438
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G G + VL + + + L +N L+ AYGR A + + M G P
Sbjct: 439 CGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPC 498
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY ++ S G A+ +V KM
Sbjct: 499 LTTYNALLNVLSRQGDWTAAR---SIVSKM 525
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 152/319 (47%), Gaps = 10/319 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L+ AYGR G AF + + M P + TY+ L+ + + ++++S
Sbjct: 466 TYNTLICAYGRCGSRANAFKMYDEM-TAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSK 524
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M ++G +PN ++Y+ L+ + + A +E ++ + P + + A +
Sbjct: 525 MKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRR 584
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ +E+ +++ ++ G +P + N +L Y K G + K + E +++ S ++TYN
Sbjct: 585 LEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNS 644
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSER---------IKPSCVTLCSLVRAYGHAGKPEKLGS 259
++D + ++ + + E + +RS + +KP V+ +++ + G ++
Sbjct: 645 LMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQR 704
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
VL + + + ++ LV Y + FAE + V+ M QR KP ++TYR +V +Y
Sbjct: 705 VLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYC 764
Query: 320 TNGMKNHAKEFQDLVEKMD 338
A++F +V + D
Sbjct: 765 RAKRYEDARDFLAVVAEAD 783
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 158/375 (42%), Gaps = 52/375 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + M+ +G NT ++ +++AYG +G D+A +L + MK P NTY++
Sbjct: 341 QEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKN-GFIPYTNTYNL 399
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT---------------------------- 100
++ K F + +L +MS G PN VT
Sbjct: 400 VLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCK 459
Query: 101 -------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
YNTLI AYGR A +M + P + T N L G
Sbjct: 460 VELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAAR 519
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME--YMQKYHYSWTIVTYNIVID 211
K +S G +P+ ++++LL + K G+ + A+ + Y SW I+ +VI
Sbjct: 520 SIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILR-TLVIA 578
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
F + L+ +E F+ +++ KP V L S++ Y G K + I+ +
Sbjct: 579 NF-KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSP 637
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQ---------QRGCKPDKVTYRTMVRAYSTNG 322
D + +N L+D Y + E + +L ++ Q+ KPD V+Y T++ + G
Sbjct: 638 DLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEG 697
Query: 323 MKNHAKEFQDLVEKM 337
+ KE Q ++ +M
Sbjct: 698 L---IKEAQRVLSEM 709
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 6/273 (2%)
Query: 70 IKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM- 124
+ S LKA ++ ALL +G + ++ A GR + L +M
Sbjct: 115 LPSLLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMP 174
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH- 183
L DV L A G+ + + +++ + G+ P+ T+N++LD YG+ G
Sbjct: 175 LPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRS 234
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++ A++ M+ T + VI A GR G + + F +++ P VT +
Sbjct: 235 WPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNA 294
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L++ +G AG + VLR ++++ D V +N L +Y R + E ++ M +G
Sbjct: 295 LLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKG 354
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ TY T++ AY G + A D ++K
Sbjct: 355 LLPNTFTYNTIMTAYGNAGKVDEALALFDRMKK 387
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/321 (18%), Positives = 121/321 (37%), Gaps = 45/321 (14%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C A +++ M G ++ ALL+ R G + A S++ MK + +P+
Sbjct: 475 GRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMK-SEGFKPN 533
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+YS+L++ K ++A+ ++ I P+ V TL+ A + + +E
Sbjct: 534 DMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQ 593
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA- 181
++ + +PD+ +N L + +G + +E + G+ P + T+N L+D Y K+
Sbjct: 594 EVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSN 653
Query: 182 -------------------------------------------GHFEKMSAVMEYMQKYH 198
G ++ V+ M
Sbjct: 654 EPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADG 713
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ ++TY+ ++ + + + M ++KP +T +V +Y A + E
Sbjct: 714 VAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDAR 773
Query: 259 SVLRFIDNSDIMLDTVFFNCL 279
L + +D D L
Sbjct: 774 DFLAVVAEADTNSDEKLLGAL 794
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 159/319 (49%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + DEG A+ + ++ A GR G D LL+ M P + DV Y+
Sbjct: 36 EWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 94
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + +A +++ L +++ QG+ P VTYN ++D YGR + + + L +M +
Sbjct: 95 VLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAA 154
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 155 GVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEA 214
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+ VTYN + + RAG ++ M S+ + P+ T +++ A
Sbjct: 215 LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 274
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + G+ ++ ++ + + + + +N + G+ F M +LE M + GC P+
Sbjct: 275 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 334
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ TM+ GM+++
Sbjct: 335 RVTWNTMLAVCGKRGMEDY 353
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + E+A +LF + +G ++ +L YGR G + + +LLE M+ +
Sbjct: 99 LSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR-AAGVE 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T S +I +C + D+ A D+ +G P VTYN L+ +G+A + E
Sbjct: 158 PDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV 217
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C+PD T N + +G + KC + S G+ P+ T+N ++ +Y
Sbjct: 218 LKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 277
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ A+ + M+K Y + TYN++ G+ M + M P+ VT
Sbjct: 278 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 337
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G + + VL + + + L +N L+ AYGR + + M
Sbjct: 338 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 397
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY ++ S G + A Q +V KM
Sbjct: 398 SSGFTPCLTTYNALLNVLSRQGDWSTA---QSIVSKM 431
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D GC + ++ L Y R+G F++A L+ M +
Sbjct: 204 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM-TSKGLL 262
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + D+ AL M G PN TYN + G+ F M
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G D + + +S G++ S +T+N L+ +YG+
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 382
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M ++ + TYN +++ R GD + + M KP+ +
Sbjct: 383 CGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQS 442
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ Y G + S+ + + I V LV A + + ++ + ++
Sbjct: 443 YSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK 502
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G KPD V + +M+ Y+ NG+ + A E D +++
Sbjct: 503 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQ 538
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M +G NT ++ +++AY G D+A +L + MK P+VNTY++
Sbjct: 247 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN-GYVPNVNTYNL 305
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K F + +L +MS G PN VT+NT++ G+ M + L M S
Sbjct: 306 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCG 365
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E T N + A+G G K Y++ S+G P + T+N LL+ + G +
Sbjct: 366 VELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 425
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M K + +Y++++ + + G+ +E + + + I PS V L +LV A
Sbjct: 426 SIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIAN 485
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E + + + D V FN ++ Y + +++ + + ++Q G PD
Sbjct: 486 FKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDL 545
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+TY +++ Y+ + N + E + +++++ + + +PD
Sbjct: 546 ITYNSLMDMYAKS---NESWEAEKILKQLKSSQV---KPD 579
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 160/337 (47%), Gaps = 1/337 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + M G + + ++ L+SAYGR G AF + + M ++ P
Sbjct: 346 GKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-GFTPC 404
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ + + Q+++S M G +PN +Y+ L+ Y + A +E
Sbjct: 405 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 464
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ P + + A +++ +EK +++ ++ G +P + FN +L Y K G
Sbjct: 465 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 524
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K + + + +++ S ++TYN ++D + ++ + + E + + ++S ++KP V+
Sbjct: 525 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 584
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + G ++ +L + + V ++ LV Y L+ F E + V+ M
Sbjct: 585 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 644
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KP ++TYR +V +Y + A+EF + D+
Sbjct: 645 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQ 681
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 16/316 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M NT F+ +L++Y G + K F +L MKN+ + +PD + Y++
Sbjct: 403 ESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNS-NVKPDRHFYNV 461
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEMELTL 121
+I + K D M ++GI P+ VT+NTLID + + A++F EM+
Sbjct: 462 MIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQ--- 518
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
P T N + + G + D ++ K QS G+ P++ T+ L+D YG +
Sbjct: 519 ----ERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHS 574
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F +E M+ + YN +I+AF + G +Q +R+M S+ ++PS + L
Sbjct: 575 GRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLAL 634
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ A+G + + S+L+++ +D+ D V + L+ A R+ F ++ V E M
Sbjct: 635 NSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMIL 694
Query: 302 RGCKPDKVTYRTMVRA 317
GC PD R M+R+
Sbjct: 695 SGCTPDGKA-RAMLRS 709
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 157/317 (49%), Gaps = 1/317 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + E+A +F+ M + G ++F ALL Y R G +A S++ M+ + P
Sbjct: 326 LGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKS-GLSP 384
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +TY +L+ + ++ + LL M + ++PNT ++ ++ +Y + + L
Sbjct: 385 DEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVL 444
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + +PD N + FG +D + Y++ S GI+P + T+N L+D + K
Sbjct: 445 REMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKH 504
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ + + E MQ+ Y TYNI+I++ G +++ L M+S+ + P+ VT
Sbjct: 505 GYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTY 564
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+LV YGH+G+ L + ++ + +N L++A+ + + VM
Sbjct: 565 TTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMIS 624
Query: 302 RGCKPDKVTYRTMVRAY 318
G +P + +++ A+
Sbjct: 625 DGLRPSLLALNSLINAF 641
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 160/341 (46%), Gaps = 8/341 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
++ + EK +E F ++ + ++ AL+ A R+ +KA +L+ M+ Q
Sbjct: 185 LIHALGRSEKLYEAF--ILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD-GFQ 241
Query: 61 PDVNTYSILIKSCLKAFAFD--KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
D YS++I+S + D +Q L ++ + I + + N +I + +A
Sbjct: 242 SDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 301
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L + + P T + A GN G+ + E +E+ + G++P I FN LL Y
Sbjct: 302 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 361
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G ++ +++ M+K S TY +++DA+ G + +L + M + ++P+
Sbjct: 362 ARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 421
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ +Y G+ +K VLR + NS++ D F+N ++D +G+ C +
Sbjct: 422 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 481
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M G +PD VT+ T++ + +G + A E L E+M E
Sbjct: 482 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAE---LFEEMQE 519
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 1/295 (0%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++ + ++G ++A L M P +T+ +I + ++ +A+ +M
Sbjct: 287 IILGFAKAGDPNRALYFLS-MVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEG 345
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G++P +N L+ Y R E E + +M PD T + A+ N G+ ++
Sbjct: 346 GLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESA 405
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
++ ++ +QP+ F+ +L SY G ++K V+ M+ + YN++ID
Sbjct: 406 RHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDT 465
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
FG+ L + M SE I+P VT +L+ + G ++ + + +
Sbjct: 466 FGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPC 525
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+N ++++ G + + E+K +L MQ +G P+ VTY T+V Y +G N A
Sbjct: 526 PTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDA 580
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 36/310 (11%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LFQ M D+G N+ ++ AL+ YGR GLF +A L + M C DV+TY+I I
Sbjct: 109 KLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGV-GCAKDVHTYNIAIAM 167
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + ++ LL +M T+G+ P+ VTYNTL+D Y + F + L +M P+
Sbjct: 168 YGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPN 227
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+WT N L + + + +E +S G+ P+I T++ +L YG+ G + + + + +
Sbjct: 228 IWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWD 287
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + I+ Y+ +I+++G G ++ F+ MR I P +L+ AYG AG
Sbjct: 288 EMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + + ++F M + G PD +TY
Sbjct: 348 RCRE--------------AELLYFE---------------------MTKEGFVPDGITYG 372
Query: 313 TMVRAYSTNG 322
+VRA++ G
Sbjct: 373 ILVRAFANAG 382
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 35/344 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNT---PD----------- 58
LF M+ +GC+A ++T ++ Y R D A LLE MK + PD
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 59 --------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
++ TY+ LIK + L +M +G PN+
Sbjct: 64 VNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNS 123
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
TYN LI YGR +F E +M C DV T N + +G G ++ ME+ ++
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ G+ P T+N LLD Y K +F K ++ M + Y I TYNI++ + +
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
+ + LF ++S+ + P+ VT +++ YG G + + + + + + ++
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
L+++YG + E + M++ G PD Y ++ AY G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M D GC + ++ L++ + G D+A L M ++ CQP+V T++I++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIIL 316
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+S + + LL+DM +G P+ VT+N LI+ R + L KM C+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ + N L F ++D + E+ S G P I T+N +L + K G E +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + S ++TYN VID +AG + L MR++ +KP +T SLV
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
GK ++ + I + V FN ++ + + L M RGCKP++ +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y ++ + GM A E
Sbjct: 557 YTILIEGLAYEGMAKEALEL 576
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 36/368 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--- 58
LGK ++ K E+ + G + ++ ++S Y ++G + A S+L+ M +PD
Sbjct: 150 LGKTRKAAKILEILEG---SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT 206
Query: 59 ----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
C PDV TY+ILI++ + LL +M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+G P+ VTYN L++ + E L M S C+P+V T N LR+ ++G+
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
EK G PS+ TFNIL++ + G + ++E M ++ ++YN ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 211 DAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
F + + + +EYL R M S P VT +++ A GK E +L + +
Sbjct: 387 HGFCKEKKMDRAIEYLER-MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ +N ++D + + +L+ M+ + KPD +TY ++V S G + A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 330 FQDLVEKM 337
F E+M
Sbjct: 506 FFHEFERM 513
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 4/322 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + + MV G + T L+ + R G KA +LE ++ + PDV TY++
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS-GAVPDVITYNV 177
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA + ++L MS + P+ VTYNT++ + + + L +ML D
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T + A + K ++ + G P + T+N+L++ K G ++
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M ++T+NI++ + G E L M + PS VT L+
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +L + +++ +N L+ + + K LE M RGC PD
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
VTY TM+ A +G A E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEI 436
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 8/244 (3%)
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
S + + G+ + TL Y + ED E N LR +
Sbjct: 61 SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVES-----NNHLRQMVRT 115
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+++ K E G P I L+ + + G K + ++E ++ ++TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N++I + +AG++ + M + P VT +++R+ +GK ++ VL +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
D D + + L++A R +L+ M+ RGC PD VTY +V G +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 327 AKEF 330
A +F
Sbjct: 293 AIKF 296
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 158 KFQSAGIQPSINTFNILLDSYGKA---GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
K +S+G+ F L Y + GH+ +++ ++ V N +
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNS--------SFALEDVESNNHLRQMV 113
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
R G+L++ M P + +L+R + GK K +L ++ S + D +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+N ++ Y + E+ L V+ + PD VTY T++R+ +G A E D +
Sbjct: 174 TYNVMISGYCKA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 335 EKMD 338
+ D
Sbjct: 231 LQRD 234
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA +L M + +T ++++L+ R G D+A + +P
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRP 517
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T++ ++ K+ D+ L M +G +PN +Y LI+ M E
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA---- 573
Query: 122 VKMLSEDC 129
+++L+E C
Sbjct: 574 LELLNELC 581
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 9/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + + A +F V G N +++L+ AYGRSG KA + E MK C+P
Sbjct: 131 LGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV--CKP 188
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ +I +C K + + +M QG+ P+ +T+NTLI A GRA + E +
Sbjct: 189 NLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIF 248
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGK 180
+M D T N + + GQ+ E +S+GI+PS+ T++ ++D Y K
Sbjct: 249 AEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAK 308
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + A+ + M+ + + YN ++D R G+ + + R M VT
Sbjct: 309 LGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVT 368
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ +YG GK + S+L + + + ++ L+DAY + + + + ++
Sbjct: 369 YNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVK 428
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G +PD V Y T+V NG + A L+E+M + + RP+
Sbjct: 429 KAGLQPDVVLYSTLVDGCCKNGSPDEALA---LLEEMADNGI---RPN 470
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 6/323 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + E+ +F M + G + ++ L++ Y R G +L+E M + +P
Sbjct: 236 GRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPS 295
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS +I K + AL +M Q + P+ + YNT++D + R F E
Sbjct: 296 VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRR 355
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M D+ T N L ++G G+ E+ + G P+I T++ L+D+Y K G
Sbjct: 356 AMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHG 415
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
A+ + ++K +V Y+ ++D + G + L M I+P+ +T
Sbjct: 416 FHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYN 475
Query: 243 SLVRAYGHAG-KPEKLGSVLRFIDNSDIML---DTVFFN--CLVDAYGRLKCFAEMKGVL 296
SL+ AYG K LRF + + +V ++ LVD + V
Sbjct: 476 SLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVF 535
Query: 297 EVMQQRGCKPDKVTYRTMVRAYS 319
M + G KP+ VT+ +++ A S
Sbjct: 536 REMAKNGVKPNVVTFSSILNACS 558
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + +A L + M G N +++AL+ AY + G A +L + +K QPD
Sbjct: 377 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA-GLQPD 435
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-----KMFAEM 117
V YS L+ C K + D+ ALL +M+ GIRPN +TYN+L+DAYGR K F ++
Sbjct: 436 VVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKL 495
Query: 118 ELTLVKMLSEDCEPDV-WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L+ ++ +P V + + + + + + G++P++ TF+ +L+
Sbjct: 496 RFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILN 555
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ E S+++E M+ + VT+ +++
Sbjct: 556 ACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLM 589
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 40/302 (13%)
Query: 38 GRSGLFDKAFSLLEHM--KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
G SG ++K + M + Q D T S +I S + D Q + G
Sbjct: 95 GHSGQWEKVVKSFDWMVLQQNLRSQWDKVT-STIISSLGRLGRSDWAQLIFDRAVGAGFG 153
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
N Y++LI AYGR+ A+ + + + + C+P++ N + A G T +
Sbjct: 154 NNVFVYSSLICAYGRSGKLAK-AVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRI 212
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ + G+ P TFN L+ + G+A +E+ + M++ + VTYN +I + R
Sbjct: 213 FREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCR 272
Query: 216 AGDLKQMEYLFRLM-RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
G + L M +S I+PS +T
Sbjct: 273 GGQMHLGAALMETMAKSSGIEPSVIT---------------------------------- 298
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
++ ++D Y +L E + + M+ + +PD + Y TMV ++ G + A + +
Sbjct: 299 -YSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 357
Query: 335 EK 336
E+
Sbjct: 358 EE 359
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSIL---IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
+ S L H+ P P +L +K +K+ + + ALL +S + P+ + +
Sbjct: 31 RLVSKLSHL-GRPSSAPGKPIKPVLSSAVKHMIKSPSPSLMPALLDQVSAHLLGPDDLPF 89
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW--TMNCTLRAFGNSGQIDTMEKCYEKF 159
++ G + + ++ + M+ + W + + + G G+ D + +++
Sbjct: 90 --IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRA 147
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
AG ++ ++ L+ +YG++G K + E M K +V YN VIDA + GD
Sbjct: 148 VGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDY 206
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+FR M + + P D + FN L
Sbjct: 207 PTALRIFREMLEQGMSP-----------------------------------DRITFNTL 231
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ A GR + E + M++RG D VTY T++ Y G
Sbjct: 232 ISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGG 274
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 155/309 (50%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ +M E+
Sbjct: 375 ILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +E+ + + P T+NI+++ G+ +E +
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVE 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 495 AMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + + + N L++A+G + E VL+ M++ G +PD
Sbjct: 555 AQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDV 614
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 615 ITYTTLMKA 623
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 151/325 (46%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A EL + G + + TAL+SA G +G +A +L + +P
Sbjct: 239 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPR 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K ++ + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 299 TRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + Q++G++P + +N+++D++GK
Sbjct: 359 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYN 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ M++ +VT+N +IDA + G + LF MR P T
Sbjct: 419 CLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYN 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + E + ++L + ++ + + + LVD YGR + E +E M+
Sbjct: 479 IMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHA 563
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M+ + +PD + Y++
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYNV 409
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K M + I P+ VT+NTLIDA+ GR E+ +M
Sbjct: 410 MIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMEL---FEEMR 466
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C P T N + G + + +E + + G+ P+I T+ L+D YG++G ++
Sbjct: 467 ESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYK 526
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + M+++ ++ S + L SL+
Sbjct: 527 EAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLI 586
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 587 NAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 647 PDRKA-RAMLRS 657
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ E + M ++G N ++T L+ YGRSG + +A +E MK +
Sbjct: 483 LLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD-GLK 541
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ + + N+LI+A+G + E
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q D + YE+ ++G P
Sbjct: 602 LQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 9/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + + A +F V G N +++L+ AYGRSG KA + E MK C+P
Sbjct: 130 LGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV--CKP 187
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ +I +C K + + +M QG+ P+ +T+NTLI A GRA + E +
Sbjct: 188 NLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIF 247
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGK 180
+M D T N + + GQ+ E +S+GI+PS+ T++ ++D Y K
Sbjct: 248 AEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAK 307
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + A+ + M+ + + YN ++D R G+ + + R M VT
Sbjct: 308 LGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVT 367
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ +YG GK + S+L + + + ++ L+DAY + + + + ++
Sbjct: 368 YNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVK 427
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G +PD V Y T+V NG + A L+E+M + + RP+
Sbjct: 428 KAGLQPDVVLYSTLVDGCCKNGSPDEALA---LLEEMADNGI---RPN 469
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 6/323 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + E+ +F M + G + ++ L++ Y R G +L+E M + +P
Sbjct: 235 GRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPS 294
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS +I K + AL +M Q + P+ + YNT++D + R F E
Sbjct: 295 VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRR 354
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M D+ T N L ++G G+ E+ + G P+I T++ L+D+Y K G
Sbjct: 355 AMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHG 414
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
A+ + ++K +V Y+ ++D + G + L M I+P+ +T
Sbjct: 415 FHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYN 474
Query: 243 SLVRAYGHAG-KPEKLGSVLRF--IDNSDIMLDTVFFN---CLVDAYGRLKCFAEMKGVL 296
SL+ AYG K LRF + ++L + LVD + V
Sbjct: 475 SLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVF 534
Query: 297 EVMQQRGCKPDKVTYRTMVRAYS 319
M + G KP+ VT+ +++ A S
Sbjct: 535 REMAKNGVKPNVVTFSSILNACS 557
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + +A L + M G N +++AL+ AY + G A +L + +K QPD
Sbjct: 376 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA-GLQPD 434
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-----KMFAEM 117
V YS L+ C K + D+ ALL +M+ GIRPN +TYN+L+DAYGR K F ++
Sbjct: 435 VVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKL 494
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM----EKCYEKFQSAGIQPSINTFNI 173
L+ ++ +P +M ++ + Q + + + + G++P++ TF+
Sbjct: 495 RFFLLPRVTMLLKP---SMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 551
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+L++ E S ++E M+ + VT+ +++
Sbjct: 552 ILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLM 588
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 40/302 (13%)
Query: 38 GRSGLFDKAFSLLEHM--KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
G SG ++K + M + Q D T S +I S + D Q + G
Sbjct: 94 GHSGQWEKVVKSFDWMVLQQNLRSQWDKVT-STIISSLGRLGRSDWAQLIFDRAVGAGFG 152
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
N Y++LI AYGR+ A+ + + + + C+P++ N + A G T +
Sbjct: 153 NNVFVYSSLICAYGRSGKLAK-AVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRI 211
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ + G+ P TFN L+ + G+A +E+ + M++ + VTYN +I + R
Sbjct: 212 FREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCR 271
Query: 216 AGDLKQMEYLFRLM-RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
G + L M +S I+PS +T
Sbjct: 272 GGQMHLGAALMETMAKSSGIEPSVIT---------------------------------- 297
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
++ ++D Y +L E + + M+ + +PD + Y TMV ++ G + A + +
Sbjct: 298 -YSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 356
Query: 335 EK 336
E+
Sbjct: 357 EE 358
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSIL---IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
+ S L H+ P P +L +K +K+ + + ALL +S + P+ + +
Sbjct: 30 RLVSKLSHL-GRPSSAPGKPIKPVLSSAVKHMIKSPSPSLMPALLDQVSAHLLGPDDLPF 88
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW--TMNCTLRAFGNSGQIDTMEKCYEKF 159
++ G + + ++ + M+ + W + + + G G+ D + +++
Sbjct: 89 --IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRA 146
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
AG ++ ++ L+ +YG++G K + E M K +V YN VIDA + GD
Sbjct: 147 VGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDY 205
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+FR M + + P D + FN L
Sbjct: 206 PTALRIFREMLEQGMSP-----------------------------------DRITFNTL 230
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ A GR + E + M++RG D VTY T++ Y G
Sbjct: 231 ISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGG 273
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F+ M +G + AL+ ++ GL +A +L ++ + Y+ L+
Sbjct: 315 AWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKK-GVSSNTIVYNTLM 373
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ ++ + L +M T+GI+P T+N L+ AY R +E + +M +
Sbjct: 374 DAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLK 433
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + C + A+G + M + K + GI+P+ +++ L+ +Y +G EK A
Sbjct: 434 PNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYA 493
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E MQ+ +I TY ++DAF RAGD + + +++LMR E+++ + VT +LV +
Sbjct: 494 AFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFA 553
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++ V+ N + + +N L++AY R +++ +LE M KPD V
Sbjct: 554 KHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSV 613
Query: 310 TYRTMVRAY 318
TY TM+ A+
Sbjct: 614 TYSTMIYAF 622
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 143/279 (51%), Gaps = 2/279 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ + +G +NT + L+ AY +S ++A L MK T +P T++IL+ +
Sbjct: 353 ILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMK-TKGIKPTEATFNILMYAY 411
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSEDCEPD 132
+ + V+ L+++M G++PN +Y +I AYG+ K ++M +KM + +P
Sbjct: 412 SRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPT 471
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + A+ SG + +E Q GI+PSI T+ LLD++ +AG + + + +
Sbjct: 472 SHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWK 531
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M++ T VT+N ++D F + G K+ + + + P+ +T L+ AY G
Sbjct: 532 LMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGG 591
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ KL +L + ++ D+V ++ ++ A+ R++ F++
Sbjct: 592 RHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQ 630
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNTPDCQPDVNT 65
QPE +L M + G N +S+T ++SAYG+ + D A MK +P ++
Sbjct: 416 QPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKD-GIKPTSHS 474
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K A +M +GI+P+ TY L+DA+ RA + M
Sbjct: 475 YTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMR 534
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E E T N + F G KF + G+ P++ T+N+L+++Y + G
Sbjct: 535 REKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHS 594
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
K+ ++E M ++ VTY+ +I AF R D Q
Sbjct: 595 KLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQ 630
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M +G + S+TAL+ AY SG +KA++ E+M+ +P + TY+ L+
Sbjct: 456 AADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQRE-GIKPSIETYTALL 514
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ +A + + M + + VT+NTL+D + + + E + K +
Sbjct: 515 DAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLH 574
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V T N + A+ G+ + + E+ + ++P T++ ++ ++ + V
Sbjct: 575 PTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLR---------V 625
Query: 191 MEYMQKYHYSWTIVTYNIVID 211
++ Q + Y +V V+D
Sbjct: 626 RDFSQAFFYHQEMVKSGQVMD 646
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 96 PNTVTY---NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
P+ VT L G+AKM ++ + + S D N + +S + +
Sbjct: 220 PSLVTPRACTVLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARYEDA 279
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGH--------FEKMSA--------------- 189
K YE ++ + P T +I++ K GH FEKM+
Sbjct: 280 WKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIK 339
Query: 190 -------------VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ ++K S + YN ++DA+ ++ +++ E LF M+++ IKP
Sbjct: 340 SFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKP 399
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG-V 295
+ T L+ AY +PE + ++ + + + + + C++ AYG+ K ++M
Sbjct: 400 TEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADA 459
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M++ G KP +Y ++ AYS +G A
Sbjct: 460 FLKMKKDGIKPTSHSYTALIHAYSVSGWHEKA 491
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 163/342 (47%), Gaps = 4/342 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A + + M GC + ++ +L+S+Y + GL ++A L E M+ +PD
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEME-VKGIEPD 351
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ L+ +A D ++M G +PN TYN LI +G F EM +
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ S PDV T N L FG +G + +++ + +G P +T+ L+ SY + G
Sbjct: 412 EIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 471
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + + M + I TYN V+ A R G +Q E LF M + +P ++
Sbjct: 472 LFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYS 531
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A K +K+ S+ I I LV ++ ++ + +++R
Sbjct: 532 SLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRR 591
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
C D M+ Y NGM K+ ++++ M E+ + +
Sbjct: 592 RCSLDINVLNAMISIYGKNGM---VKKVEEILSLMKESSINL 630
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 155/317 (48%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD+A + + M PD++TY+ ++ +
Sbjct: 444 VFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA-GIHPDISTYNAVLSAL 502
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M RP+ ++Y++L+ AY AK +M+ + +E E
Sbjct: 503 ARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHN 562
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + EK + + + IN N ++ YGK G +K+ ++
Sbjct: 563 GLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSL 622
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ + + TYN ++ + R GD ++ E + ++S R +P + +++ AYG G+
Sbjct: 623 MKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQ 682
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S ++ D V +N V +Y F E ++ M GCKP++ TY T
Sbjct: 683 MKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNT 742
Query: 314 MVRAYSTNGMKNHAKEF 330
+++ Y ++G K F
Sbjct: 743 ILQEYCSHGRIADGKSF 759
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 3/314 (0%)
Query: 24 DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK-AFAFDKV 82
D + ++TAL+SA R+ F A ++ M C P + TY++++ K A + +V
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVC-PALVTYNVVLHVYSKIAVPWKEV 231
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
AL+ M GI + TYNTLI R ++ E +M + EPD T+N L
Sbjct: 232 LALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDV 291
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+G + + D ++ + G PS+ T+N L+ SY K G E+ + + E M+
Sbjct: 292 YGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPD 351
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TY ++ RAG + + M KP+ T +L++ +G GK ++ V
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I ++ + D V +N L+ +G+ E+ GV + M++ G P++ TY +++ +YS G
Sbjct: 412 EIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 471
Query: 323 MKNHAKE-FQDLVE 335
+ + A E ++ ++E
Sbjct: 472 LFDQAMEIYKRMIE 485
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 154/349 (44%), Gaps = 10/349 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + A +F+ MV G ++ +L Y + + + + +L++ M+ D
Sbjct: 186 LSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRK--DGI 243
Query: 61 P-DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P D TY+ LI C + + + + +M G P+ VT N+L+D YG+A+ + E
Sbjct: 244 PLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIG 303
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M C P V T N + ++ G ++ + E+ + GI+P + T+ L+
Sbjct: 304 VLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLD 363
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG + M + + TYN +I G G +M +F +RS P V
Sbjct: 364 RAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVV 423
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ +G G ++ V + + S + + + L+ +Y R F + + + M
Sbjct: 424 TWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM 483
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G PD TY ++ A + G A++ +E +D RPD
Sbjct: 484 IEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS------RPD 526
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C + A++S YG++G+ K +L MK + TY+ L+ + +K
Sbjct: 593 CSLDINVLNAMISIYGKNGMVKKVEEILSLMKES-SINLSTATYNSLMHMYSRLGDCEKC 651
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ +L+++ + RP+ +YNT+I AYGR E +M PD+ T N +++
Sbjct: 652 ENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKS 711
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ + + + G +P+ T+N +L Y G + + + + H
Sbjct: 712 YVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPELH 767
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 164/327 (50%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ + AH LF M + +++ L++++G+ G+FD A S L+ M+ D+
Sbjct: 35 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDL 93
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ + + K ++ S + GI P+ V YN++I+ YG+AK+F E L + +
Sbjct: 94 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 153
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M P+ + + L + + + + + + + T NI++D YG+
Sbjct: 154 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 213
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + ++K +V+YN ++ +G A + +LFRLM+ + I+ + VT +
Sbjct: 214 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 273
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + EK ++++ + + I + + ++ ++ +G+ + + ++ G
Sbjct: 274 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 333
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY G+ HAK
Sbjct: 334 VEIDQVLYQTMIVAYERVGLMGHAKRL 360
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 5/316 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K +A L + M + G NT S++ LLS Y + F +A S+ MK +C D
Sbjct: 139 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV-NCALD 197
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T +I+I + + L + I PN V+YNT++ YG A++F E
Sbjct: 198 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 257
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M +D E +V T N ++ +G + + + ++ QS GI+P+ T++ ++ +GKAG
Sbjct: 258 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 317
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + ++ V Y +I A+ R G M + RL+ ++ P +
Sbjct: 318 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHAKRLLHELKL-PDNIPRE 373
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + AG+ E+ V R S + D F C+++ Y R + + + V E M+
Sbjct: 374 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 433
Query: 303 GCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 434 GYFPDSNVIAMVLNAY 449
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ ++ +LL+ + P V Y++++++ L+A FD L +M + + P+ TY+
Sbjct: 3 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 62
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSED-------------------CE------------- 130
TLI ++G+ MF + L+ ++ + +D C+
Sbjct: 63 TLITSFGKEGMF-DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 121
Query: 131 ----PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD+ N + +G + ++ AG+ P+ +++ LL Y + F +
Sbjct: 122 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 181
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+V M++ + + + T NI+ID +G+ +K+ + LF +R I+P+ V+ +++R
Sbjct: 182 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 241
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG A + + R + DI + V +N ++ YG+ + +++ MQ RG +P
Sbjct: 242 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 301
Query: 307 DKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ +TY T++ + G + A FQ L
Sbjct: 302 NAITYSTIISIWGKAGKLDRAATLFQKL 329
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 107/243 (44%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ YN ++ RAK F +M PD +T + + +FG G D+
Sbjct: 21 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 80
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+K + + + ++ L++ + + K ++ +++ + +V YN +I+ +G+
Sbjct: 81 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 140
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A ++ L + M + P+ V+ +L+ Y K + SV + + LD
Sbjct: 141 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 200
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
N ++D YG+L E + +++ +P+ V+Y T++R Y + A L++
Sbjct: 201 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 260
Query: 336 KMD 338
+ D
Sbjct: 261 RKD 263
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 111/261 (42%), Gaps = 32/261 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + +A LF+ M + + N ++ ++ YG++ +KA +L++ M+ + +P+
Sbjct: 244 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ-SRGIEPN 302
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS +I KA D+ L + + G+ + V Y T+I AY R + + L
Sbjct: 303 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLH 362
Query: 123 KMLSEDCEP-------------------------------DVWTMNCTLRAFGNSGQIDT 151
++ D P D+ C + + + +
Sbjct: 363 ELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 422
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + +EK ++AG P N ++L++YGK FEK V MQ+ + + ++
Sbjct: 423 VIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 482
Query: 212 AFGRAGDLKQMEYLFRLMRSE 232
+ D + +E LF+ + S+
Sbjct: 483 LYSSKKDFEMVESLFQRLESD 503
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 155/314 (49%), Gaps = 1/314 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P
Sbjct: 171 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME-ADGVKPSS 229
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+S ++ + K A+L +M G+RP+ YN +ID +G+ +
Sbjct: 230 YVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDR 289
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M E EPDV T N + A G+ D + +++ + + T+NI+++ G+
Sbjct: 290 MREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQR 349
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+E + A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +
Sbjct: 350 WEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHA 409
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV AY G + +V++ + + TV N L++A+G + AE VL+ M++ G
Sbjct: 410 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 469
Query: 304 CKPDKVTYRTMVRA 317
+PD +TY T+++A
Sbjct: 470 LRPDVITYTTLMKA 483
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 150/326 (46%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ + P+ A EL + G + + TAL+S+ G + +A +L + +P
Sbjct: 98 FARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKP 157
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L+K +K + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 158 RTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILL 217
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M ++ +P + + L F + G+ + ++G++P + +N+++D++GK
Sbjct: 218 KEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKY 277
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ M++ +VT+N +IDA + G + LF MR T
Sbjct: 278 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY 337
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ G + E + ++L + ++ + + + LVD YGR F E +E M+
Sbjct: 338 NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKA 397
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 398 DGLKPSSTMYHALVNAYAQRGLADHA 423
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 154/312 (49%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M + +PD + Y++
Sbjct: 211 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREM-HASGVRPDRHFYNV 269
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K M +GI P+ VT+NTLIDA+ GR E+ +M
Sbjct: 270 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL---FDEMR 326
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C T N + G + + +E + + G+ P+I T+ L+D YG++G F+
Sbjct: 327 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 386
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + MR++ ++ S V L SL+
Sbjct: 387 EAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 446
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 447 NAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCA 506
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 507 PDR-KARAMLRS 517
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ E + M ++G N ++T L+ YGRSG F +A +E MK +
Sbjct: 343 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK-ADGLK 401
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+LI+A+G + AE
Sbjct: 402 PSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 461
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q + + YE+ ++G P
Sbjct: 462 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 507
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 1/321 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M D GC + ++ L++ + G D+A L M ++ CQP+V T++I+
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNII 315
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LL+DM +G P+ VT+N LI+ R + L KM C
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P+ + N L F ++D + E+ S G P I T+N +L + K G E
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID +AG + L MR++ +KP +T SLV
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ + + + V FN ++ + + L M RGCKP +
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTET 555
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
+Y ++ + GM A E
Sbjct: 556 SYTILIEGLAYEGMAKEALEL 576
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 164/369 (44%), Gaps = 35/369 (9%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-- 58
G C+ + KA ++ + + G + ++ ++S Y ++G + A S+L+ M +PD
Sbjct: 146 GFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV 205
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
C PDV TY+ILI++ + + LL +M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G P+ VTYN L++ + E L M S C+P+V T N LR+ ++G+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
EK G PS+ TFNIL++ + G + ++E M K+ ++YN +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385
Query: 210 IDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ F + + + +EYL R M S P VT +++ A GK E +L + +
Sbjct: 386 LHGFCKEKKMDRAIEYLER-MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ +N ++D + + +L+ M+ + KPD +TY ++V S G + A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 329 EFQDLVEKM 337
+F E+M
Sbjct: 505 KFFHEFERM 513
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 4/322 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ + + MV G + T L+ + R G KA +LE ++ + PDV TY++
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGS-GAVPDVITYNV 177
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA + ++L MS + P+ VTYNT++ + + + L +ML D
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T + A + K ++ + G P + T+N+L++ K G ++
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M ++T+NI++ + G E L M + PS VT L+
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +L + +++ +N L+ + + K LE M RGC PD
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
VTY TM+ A +G A E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEI 436
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 132/349 (37%), Gaps = 54/349 (15%)
Query: 22 GCDANTQSFTALLSAYGRS---GLFDKAFS--LLEHMKNTPDCQPDVNTYSILIKSCLKA 76
G + Q F L S + S G F A S +LE +++ + V T + +
Sbjct: 67 GLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELE-----EG 121
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
F F L +M G P+ + TLI + R + L + PDV T
Sbjct: 122 FKF------LENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N + + +G+I+ ++ + P + T+N +L S +G ++ V++ M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
++TY I+I+A R + Q L MR P VT LV G+ ++
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 257 --------------------------LGSVLRFIDNSDIMLD---------TVFFNCLVD 281
+ S R++D ++ D V FN L++
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
R +LE M + GC+P+ ++Y ++ + + A E+
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 158 KFQSAGIQPSINTFNILLDSYGKA---GHFEKMSA--VMEYMQKYHYSWTIVTYNIVIDA 212
+ +S+G+ F+ L + + GHF ++ V+E ++ ++ +V
Sbjct: 62 QVESSGLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLV-------- 113
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
R G+L++ M P + +L+R + GK K +L ++ S + D
Sbjct: 114 --RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ +N ++ Y + E+ L V+ + PD VTY T++R+ +G A E D
Sbjct: 172 VITYNVMISGYCKA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 333 LVEKMD 338
+ + D
Sbjct: 229 RMLQRD 234
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 159/342 (46%), Gaps = 4/342 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ Q M GC + ++ +L+S+Y + GL ++A +L + M+ +PD
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGIKPD 347
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +A D +M G +PN TYN LI +G F EM
Sbjct: 348 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 407
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ S PD+ T N L FG +G + +++ + AG P +T+ L+ SY + G
Sbjct: 408 ELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F+ + + M + + TYN V+ A R G +Q E LF M KP +
Sbjct: 468 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 527
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A + +K+ ++ I + I LV ++ AE + ++Q+
Sbjct: 528 SLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
C D MV Y N M ++ + ++ M E+ + +
Sbjct: 588 RCSLDINVLNAMVSIYGKNRM---VRKVEKILSLMKESAINL 626
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK- 75
A++D + ++TAL+SA+ R+G F A ++ M ++ QP + TY++++ K
Sbjct: 162 ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS-GVQPAIVTYNVVLHVYSKM 220
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
A + +V L++ M G+ P+ TYNTLI R ++ E +M + EPD T
Sbjct: 221 AVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 280
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N L +G + + D + ++ + G PS+ T+N L+ SY K G E+ A+ + M+
Sbjct: 281 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+VTY +I RAG + + M KP+ T +L++ +G GK
Sbjct: 341 VKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++ +V + ++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++
Sbjct: 401 EMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460
Query: 316 RAYSTNGM 323
+YS G+
Sbjct: 461 SSYSRCGL 468
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD A + + M PDV+TY+ ++ +
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSAL 498
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M + +P+ +Y++L+ AY AK +M+ + SE EP
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
W + + + EK + + + IN N ++ YGK K+ ++
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ + + TYN ++ + R GD ++ E + ++S ++P + +++ AYG G+
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S + D V +N V +Y F E ++ M +GCKP++ TY +
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 314 MVRAYSTNGMKNHAKEF 330
+V Y NG AK F
Sbjct: 739 IVEGYCRNGKLTDAKIF 755
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
EL +M + G + ++ L+S R L+ +A + + MK + +PD T++ L+
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKAS-GFEPDKVTFNSLLDV 287
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
KA D+ ++ +M G P+ VTYN+LI +Y + + + +M + +PD
Sbjct: 288 YGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPD 347
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T + +G+ID Y++ G +P++ T+N L+ +G G F +M AV +
Sbjct: 348 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 407
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ + IVT+N ++ FG+ G ++ +F+ M+ P T SL+ +Y G
Sbjct: 408 ELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + + + + I D +N ++ A R + + + + M++R CKPD+ +Y
Sbjct: 468 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 527
Query: 313 TMVRAYSTNGMKNHAKEFQD 332
+++ AY+ + K D
Sbjct: 528 SLLHAYANAKRLDKMKALSD 547
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 6/331 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A +F+ MVD G ++ +L Y + + + + L+ MK PD TY+ L
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH-GVAPDRYTYNTL 249
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I C + + + + +M G P+ VT+N+L+D YG+A+ E + +M C
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V T N + ++ G ++ ++ + GI+P + T+ L+ +AG + +A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKID--AA 367
Query: 190 VMEY--MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++EY M + + TYN +I G G +M +F +RS P VT +L+
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAV 427
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+G G ++ V + + + + + + L+ +Y R F + + M + G PD
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 487
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY ++ A + G A++ +E+ D
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKLFAEMEERD 518
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F + + C + A++S YG++ + K +L MK + TY+ L
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAATYNSL 634
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + +K + +L+++ + G+RP+ +YNT+I AYGR E +M
Sbjct: 635 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 694
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PDV T N ++++ ++ + + + G +P+ T+N +++ Y + G
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754
Query: 190 VMEYMQKYHYSWT 202
+ + + H ++
Sbjct: 755 FVSNLPQLHPGYS 767
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C EK + + G + S+ ++ AYGR G +A L MK + +P
Sbjct: 641 LGDC---EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKP 696
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR 110
DV TY+I +KS + F++ L+ M TQG +PN TYN++++ Y R
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 168/345 (48%), Gaps = 11/345 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ AH LF M +G + +++ L++ +G+ GLFD + L+ M+ + D+
Sbjct: 156 RAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQD-NVSGDL 214
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI K + K ++ S + I P+ + YN++I+ +G+AK+F E L L +
Sbjct: 215 VLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQE 274
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M +PD + + L + ++ + + + A + T NI++D YG+
Sbjct: 275 MRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHM 334
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K +++YN ++ +G A + +LFRLM+S+ ++ + VT +
Sbjct: 335 PKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNT 394
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ YG + EK ++++ ++ I + + ++ ++ + + + + ++ G
Sbjct: 395 MINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSG 454
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ D+V Y+TM+ AY G+ HAK +KRPD
Sbjct: 455 VRIDEVLYQTMIVAYERTGLVAHAKRL----------LHELKRPD 489
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 147/318 (46%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L Q M D +T S++ LL+ Y + F +A SL M N C
Sbjct: 258 VFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEM-NEAKCP 316
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI+PN ++YNTL+ YG A +F E
Sbjct: 317 LDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHL 376
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M S+D + +V T N + +G + + + ++ GI+P+ T++ ++ + K
Sbjct: 377 FRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEK 436
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ R G + + L ++ +P +
Sbjct: 437 AGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELK----RPDNIP 492
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F C+++ + + K +A + V E M+
Sbjct: 493 RDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMR 552
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ G PD ++ A+
Sbjct: 553 EVGYFPDSDVIALVLNAF 570
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 159/362 (43%), Gaps = 37/362 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q + EL+ M + S ++S R + +A +LL+ + + +
Sbjct: 84 LLAAIGQTQNEDELYAVM--SPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYR 141
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------ 114
P + Y++L+++ L+A + L +M +G+ P+ TY+TLI +G+ +F
Sbjct: 142 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFW 201
Query: 115 -AEME--------------LTLVKMLSE--------------DCEPDVWTMNCTLRAFGN 145
+ME + L + LS+ PD+ N + FG
Sbjct: 202 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGK 261
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ ++ + +QP +++ LL Y F + ++ M + + T
Sbjct: 262 AKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTT 321
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
NI+ID +G+ K+ + LF MR I+P+ ++ +L+R YG A + + R +
Sbjct: 322 CNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQ 381
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ D+ + V +N +++ YG+ + +++ M +RG +P+ +TY T++ + G +
Sbjct: 382 SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLD 441
Query: 326 HA 327
A
Sbjct: 442 RA 443
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 32/261 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ P++A LF +M G N S+ LL YG + LF +A L M+ + D Q +
Sbjct: 330 GQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQ-SKDVQQN 388
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----------- 111
V TY+ +I K +K L+ +M+ +GI PN +TY+T+I + +A
Sbjct: 389 VVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQ 448
Query: 112 ---------------KMFAEMELT-LV----KMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
M E T LV ++L E PD + + +G+I+
Sbjct: 449 KLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEE 508
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + A I+ F +++ + K + + V E M++ Y +V++
Sbjct: 509 ATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLN 568
Query: 212 AFGRAGDLKQMEYLFRLMRSE 232
AFG+ + + + L+R M E
Sbjct: 569 AFGKLREFDKADALYRQMHEE 589
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 4/312 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS----GLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ RS KA + MK
Sbjct: 181 VMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMKGM 240
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL+++ +A ++V +L D+ + P+ T+N ++DAYG+ M E
Sbjct: 241 ERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIRE 300
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME L +M S C+PD+ T N + ++G ME+ ++ + +PS+ TFN ++
Sbjct: 301 MEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMIL 360
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA +K V + M Y+ + VT+ +I +G + + LF + ++
Sbjct: 361 NYGKARLKDKAEDVFKKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHI 420
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P++ S+ + I D+ F L AY + + +L
Sbjct: 421 KVSTLNAMLDVYCLNGLPQEADSLFERAISIKIHPDSSTFKLLYKAYTKANQKELLDKLL 480
Query: 297 EVMQQRGCKPDK 308
+ M + G P+K
Sbjct: 481 KHMDKDGIIPNK 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEM 117
D YS LI K L S+M G RP+T YN LI A+ R+ K A+
Sbjct: 171 DNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKA 230
Query: 118 ELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM E C+P++ T N LRAF + ++ + ++ + + P I TFN ++D
Sbjct: 231 IGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMD 290
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGK G +M AV+ M+ ++T+N++ID++G+ +ME +F+ + + +P
Sbjct: 291 AYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERP 350
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S T S++ YG A +K V + + + L V ++ YG C + +
Sbjct: 351 SLPTFNSMILNYGKARLKDKAEDVFKKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLF 410
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + T M+ Y NG+ A
Sbjct: 411 DELVESKVHIKVSTLNAMLDVYCLNGLPQEA 441
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA-----------GHFEKMS 188
+ G GQ + + ++ G +P + +N L+ ++ ++ G+F+KM
Sbjct: 179 ISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMK 238
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
ME + IVTYNI++ AF +A +++Q+ LF+ + + P T ++ AY
Sbjct: 239 G-MERCKP-----NIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAY 292
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G ++ +VL + ++ D + FN L+D+YG+ + F +M+ V + + +P
Sbjct: 293 GKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSL 352
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ +M+ Y +K+ A +D+ +KM +
Sbjct: 353 PTFNSMILNYGKARLKDKA---EDVFKKMTD 380
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 144/290 (49%), Gaps = 3/290 (1%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA--FAFDKVQALLSDMST 91
+ Y RSG FD A LL+ M++ D +PD+ +++ LI + K+ A LL ++
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQ-DIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 59
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G+RP+ +TYNTLI A + + +M++ +C PD+WT N + G G+
Sbjct: 60 AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQE 119
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
E +++ G QP T+N LL ++ K G E++ V E + K + +TYN +I
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+G+ G L L+ MR+ P VT LV + G + + G VL + ++ +
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
V F+ L+ AY + + + + M + G KPD++ Y M+ ++ +
Sbjct: 240 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS 289
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL-LEHMKNTPDCQPDVNTYS 67
+ A +L AM D+ + + SF L++A +SG +L L H +PD TY+
Sbjct: 11 DDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYN 70
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + D A+ +M RP+ TYN ++ +GR E EL +++ +
Sbjct: 71 TLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK 130
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+PD T N L AF G ++ +E+ E+ AG + T+N ++ YGK G +
Sbjct: 131 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 190
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M+ + VTY +++D+ G+ + + + M +KP+ VT +L+ A
Sbjct: 191 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 250
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y +G+ + + S + D + + ++D + R ++ + M + G KPD
Sbjct: 251 YAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPD 310
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y+ ++ A + N E + +++ M+
Sbjct: 311 DGLYQVLLAALAKG---NEHDEIEGVIQDME 338
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 148/313 (47%), Gaps = 14/313 (4%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++ C Q + A +F+ M+ C + ++ A++S +GR G +A + + +
Sbjct: 72 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 130
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
QPD TY+ L+ + K ++V+ + ++ G R + +TYNT+I YG+ +
Sbjct: 131 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK---MGRL 187
Query: 118 ELTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+L L +M + C PD T + + G +I K E+ AG++P++ TF+ L
Sbjct: 188 DLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 247
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ +Y K+G + + M + + Y +++D F R+ + +++ L+R M +
Sbjct: 248 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 307
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP L+ A + +++ V++ ++ M V + L+ A +C ++
Sbjct: 308 KPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----ECISQGAS 363
Query: 295 VLEVMQQRGCKPD 307
+L+ +G +PD
Sbjct: 364 LLKRACLQGYEPD 376
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK Q A E+F A + Q + A++ Y R+G F K LL+ M++ C+
Sbjct: 229 VLGKANQEALAVEIF-ARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSR-GCE 286
Query: 61 PDVNTYSILIKSCLKA--FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ +++ LI + LK+ + LL+++ GI+P+ +TYNTLI A R E
Sbjct: 287 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 346
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M++ C+PD+WT N + +G G + ++ +S G P T+N LL ++
Sbjct: 347 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 406
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G+ +K+ + E M K + +TYN +I +G+ G L+ M+ P
Sbjct: 407 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 466
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ + G A ++ V+ + N+ + F+ L+ Y + E + +
Sbjct: 467 VTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDC 526
Query: 299 MQQRGCKPDKVTYRTMV 315
M + G KPD + Y M+
Sbjct: 527 MLRSGIKPDHLAYSVML 543
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 6/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDCQPDVNTYS 67
K EL M GC+ + SF L++A +SG + + A LL ++ + QPD+ TY+
Sbjct: 272 KVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRS-GIQPDIITYN 330
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + ++ + +DM +P+ TYN +I YGR M E + S+
Sbjct: 331 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 390
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF G +D +++ E G T+N ++ YGK G +
Sbjct: 391 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 450
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ S VTY ++ID+ G+A +K+ + M + +KP+ T +L+
Sbjct: 451 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICG 510
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGK + + S I D + ++ ++D R + + + M KPD
Sbjct: 511 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 570
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+R G +N ++ +V+ M+E C
Sbjct: 571 HALYEVMLRVL---GKENREEDVHKVVKDMEELC 601
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 154/335 (45%), Gaps = 19/335 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +++ MV C + ++ A++S YGR G+ +A L + ++ + PD TY+
Sbjct: 343 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLE-SKGFLPDAVTYNS 401
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTL 121
L+ + + DKV+ + DM G + +TYNT+I YG+ +++++M+L+
Sbjct: 402 LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS- 460
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
PD T + + G + I + + +A ++P++ TF+ L+ Y KA
Sbjct: 461 ------GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKA 514
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M + + Y++++D R + + L++ M KP
Sbjct: 515 GKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALY 574
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++R G + E + V++ ++ M V + LV +CF +L +
Sbjct: 575 EVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKG----ECFDHAANMLRLAIS 630
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+GC+ D+ +++ +Y ++G A+E D + +
Sbjct: 631 QGCELDRENLLSILGSYGSSGRHLEARELLDFLRE 665
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 156/336 (46%), Gaps = 4/336 (1%)
Query: 5 CKQPE---KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
C++ E +A ++F M G + + + +++ Y + G + A L++ +
Sbjct: 718 CEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFD 777
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV+ ++ +I++ K + K ++L+ + + + +N LI AY + +
Sbjct: 778 DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIF 837
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + P V ++N ++A G++D + ++ Q G + S ++ ++LD++ A
Sbjct: 838 NTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHA 897
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ + + M+ Y T+ Y I+I + ++ +E + M KP
Sbjct: 898 GNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIW 957
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+++ Y G +K G V + I + + D +N L+ Y R + E ++ M++
Sbjct: 958 NSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRR 1017
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G +P TY++++ A+ M A+E F+ L+ K
Sbjct: 1018 VGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1053
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 155/324 (47%), Gaps = 8/324 (2%)
Query: 8 PEKAHELFQAMVDEGCDANTQSF-TALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE AH L ++G + S T ++ AYG+ L+ KA SL+ ++ D +
Sbjct: 759 PETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKC-TMVDRKVW 817
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + + +++ +A+ + M G P + N L+ A E+ + + ++
Sbjct: 818 NALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQD 877
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ ++ L AF ++G I ++K Y+ ++AG P+++ + I++ K
Sbjct: 878 MGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRD 937
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ A++ M+ + + +N V+ + GD K+ +++L++ +KP T +L+
Sbjct: 938 VEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLIL 997
Query: 247 AYGHAGKPEKLGSVLRFIDNSDI--MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
Y +PE+ S++ + + LDT + L+ A+G+L+ + + + E + + C
Sbjct: 998 MYCRDRRPEEGLSLMHEMRRVGLEPKLDT--YKSLISAFGKLQMVEQAEELFEGLLSKEC 1055
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAK 328
K D+ Y M++ + +G NH+K
Sbjct: 1056 KLDRSFYHIMMKMFRNSG--NHSK 1077
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 158/373 (42%), Gaps = 51/373 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F M+ +G S L+ A G D+ + +++ ++ D ++ SI
Sbjct: 831 ERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQ---DMGFKISKSSI 887
Query: 69 LIKSCLKAFAFD----KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ L AFA +V+ + M G P Y +I + K ++E + +M
Sbjct: 888 TL--MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM 945
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+PD+ N L+ + G + Y+ Q AG++P +T+N L+ Y +
Sbjct: 946 EVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRP 1005
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR----------------- 227
E+ ++M M++ + TY +I AFG+ ++Q E LF
Sbjct: 1006 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1065
Query: 228 ------------------LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+M+ ++P+ T+ L+ +Y +G+PE+ VL + +
Sbjct: 1066 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1125
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR--GCKPDKVTYRTMVRAYSTNGMKNHA 327
L T+ ++ ++DAY LK + ++M+ + G +PD + VRA S + H
Sbjct: 1126 PLSTLPYSSVIDAY--LKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAAS---LSQHT 1180
Query: 328 KEFQDLVEKMDET 340
E L++ + +T
Sbjct: 1181 SEAIVLLKALRDT 1193
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ + M + + ++L Y G F K + + ++ +
Sbjct: 928 LLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA-GLK 986
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +TY+ LI + ++ +L+ +M G+ P TY +LI A+G+ +M + E
Sbjct: 987 PDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEEL 1046
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+LS++C+ D + ++ F NSG EK + AG++P+I T ++L+ SY
Sbjct: 1047 FEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSG 1106
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ V++ ++ + + Y+ VIDA+ + GD M+ + ++P
Sbjct: 1107 SGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRI 1166
Query: 241 LCSLVRA 247
VRA
Sbjct: 1167 WTCFVRA 1173
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N ++ Y R F +++ +L++M+ RGC+PD V++ T++ A +G
Sbjct: 257 YNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSG 303
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 4/325 (1%)
Query: 6 KQPEKAHELFQAMVDEG---CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M ++G C N ++ ++ ++ D+A +L+HM + + D
Sbjct: 175 KRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMID-KGVKLD 233
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS +I KA A D+ + +L M +G++P+ VTYNT+ID +A+ E L
Sbjct: 234 VVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ 293
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M+ + +PDV T N + + +D + + ++P I T+N L+ Y G
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTG 353
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++++ +E M +VTY++++D + G + +F M + IKP+
Sbjct: 354 EWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y G L +L + + I + FN ++ AY + E + M Q
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH 473
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G PD VTY ++ A G + A
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDA 498
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A + Q M+D+G + +++ ++ ++ D+A +L+HM + +P
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID-KGVKP 267
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ +I KA A D+ + +L M +G++P+ VTYNT+ID +A+ + L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ +D +PD+ T NC + + ++G+ + + E+ + G+ P + T+++LLD K
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M + + Y I++ + G + + L LM + I P+
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ AY ++ + + + D V + L+DA +L + M
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ V + ++V T A+E
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 158/338 (46%), Gaps = 5/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A + Q M+D+G + ++ ++ ++ D+A +L+HM + +P
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID-KGVKP 302
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ +I KA A D+ +L M + ++P+ TYN LI Y + E+ L
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +PDV T + L +G+ K + GI+P++ + ILL Y
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ +++ M S +NIV+ A+ + + + ++F M + P VT
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482
Query: 242 CSLVRAYGHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ A G+ + +VL+F + N + ++V FN LV + + + + + M
Sbjct: 483 GILIDALCKLGRVDD--AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+G +P+ V + T++ G A+ D +E++
Sbjct: 541 WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 144/339 (42%), Gaps = 7/339 (2%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+L MV G N F +L AY + + D+A + M PDV TY ILI +
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH-GLSPDVVTYGILIDA 488
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K D + M G+ PN+V +N+L+ + + E +M + P+
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V N + N GQ+ ++ + + G++P++ ++N L+ + AG ++ + +++
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD 608
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +++Y+ ++ + + G + LFR M + + P VT ++++ H
Sbjct: 609 VMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTR 668
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + + + S D +N +++ + C E + + + + +P+ +T+
Sbjct: 669 RFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFT 728
Query: 313 TMVRAYSTNGMKNHAKEF------QDLVEKMDETCLAMK 345
M+ G K A + LV + C+ MK
Sbjct: 729 IMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 152/367 (41%), Gaps = 46/367 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGR---SGLFDKAFSLLEHMKN--TPDCQPDV 63
+ A +LF ++ A+ ++F LL+ R S + A SL M + +PD+
Sbjct: 31 DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90
Query: 64 NTYSIL---------IKSCLKAFAF---------------------------DKVQALLS 87
TYSIL I+ AF + + LL
Sbjct: 91 CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED----CEPDVWTMNCTLRAF 143
M G PN V+ NTL+ K E L L+ ++ED C P+V T N +
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEE-ALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ +D E + G++ + T++ ++D KA ++ V+++M +
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTYN +ID +A + + E + + M + +KP VT +++ A ++ VL+
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + D+ D +NCL+ Y + E+ LE M RG PD VTY ++ NG
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 324 KNHAKEF 330
A++
Sbjct: 390 CTEARKI 396
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 7/331 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
E F ++ G N LL+ + D+A +L ++ P+ C P+V +
Sbjct: 107 EHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL--LRRMPEFGCMPNVVSC 164
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG---IRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ L+K ++ LL M+ G PN VTYNT+ID +A+ E L
Sbjct: 165 NTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQH 224
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + + DV T + + + +D E + G++P + T+N ++D KA
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ V+++M +VTYN +ID +A + + + + + M + +KP T
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G+ +++ L + + D V ++ L+D + E + + M ++G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
KP+ Y ++ Y+ G + DL+
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLM 435
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 142/324 (43%), Gaps = 1/324 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M+++G N+ F +L+ ++KA L M + +P+V ++ ++ +
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ-GVRPNVVFFNTIMCNLC 560
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
Q L+ M G+RPN ++YNTLI + A E L M+S +PD+
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
+ + LR + +G+ID + + G+ P T++ +L F + + M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
K W I TYNI+++ + + + +F+ + S+ ++P+ +T ++ G+
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ + I + ++ + V + ++ + E + M++ GC PD V +
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMD 338
+R+ G A + +++M+
Sbjct: 801 IRSLLGRGEIMRAGAYLSKIDEMN 824
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA ELF M D+G N F ++ G A L++ M+ +P+V +Y+
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV-GVRPNVISYNT 589
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI A D+ LL M + G++P+ ++Y+TL+ Y + +ML +
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P T + L+ ++ + ++ Y +G Q I T+NI+L+ K ++
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + + I+T+ I+ID + G K LF + S + P+ VT C +++
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ ++ ++ S D+V N ++ + L + + +
Sbjct: 770 IQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEA 829
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
T ++ +S KNHAK +
Sbjct: 830 STTSLLISLFSREEYKNHAKSLPE 853
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PD 58
L K + ++A + Q M+D+ + Q++ L+ Y +G + + LE M PD
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373
Query: 59 C-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
+P+V Y IL+ A + LL
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI PN +N ++ AY + M E +M PDV T + A G
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + + + G+ P+ FN L+ +EK + M +V +N
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFN 553
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ G + + L M ++P+ ++ +L+ + AG+ ++ +L + +
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D + ++ L+ Y + + M ++G P VTY T+++ + A
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673
Query: 328 KEF 330
KE
Sbjct: 674 KEL 676
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TYS +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKY-----HYSWTI------------------------------VTYNIV 209
+M +++ M + HY ++I VTY V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I ++G ++ F M ER+ P + SL+ + K +K ++ + + I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LDT+FFN ++D++ + E + + ++M + G KPD +TY T++ Y G + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 330 F 330
Sbjct: 536 L 536
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTY+++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + DTV + ++ + + E M P + Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ + + AKE ++E +D CL
Sbjct: 449 SLIHSLCIFDKWDKAKEL--ILEMLDRGICL 477
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 318 GRCTE---ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ P+TVTY T+I ++ +
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + D ++ + GI FN ++DS+ K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + R +++S + D + +N ++ + + A K + + +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 132/338 (39%), Gaps = 36/338 (10%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + G D+A + M+ PD TY +I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIG 417
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M + + P + YN+LI + + + + +++ML
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D N + + G++ EK ++ G++P I T++ L+D Y AG ++ + ++
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH- 250
M VTYN +I+ + + ++ LFR M S + P +T +++
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 251 ----AGKPEKLG---------------------------SVLRFIDN---SDIMLDTVFF 276
A K +G LR N +D+ L+T F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
N ++ A ++ E K + + G PD TY M
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
IL+ SC A D A L ++ +G + + + ++ K ++ M++ L +M
Sbjct: 95 GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTY+ +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 334 GLKPEITTYGTLLQGYATKG 353
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 34/274 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + E A F+ M+DE + +L+ + +DKA L+ M + C
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TYS LI A D+ LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTYNTLI+ Y + + + +M S PD+ T N L+ +
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
NI+I A + G + + LF + + + P T
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +PD
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
S+VR G + G+ L ID L+ + +D
Sbjct: 729 SIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 2/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + + + + M+ GC NT ++ LL + ++ F++A S+ M C
Sbjct: 26 VLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA-AQGCS 84
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V +YSILI + D+ LL++M G +PN VTY +L+ + E
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PD N + F G + + +E+ G P++ T+N LL + +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F ++ ++ + M + I T+N ++D F + GD+ + LF MRS P V+
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+R GKP + +LR + S + D V +N L+D Y + + +
Sbjct: 265 YNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
+ G +PD +Y T++ G A F+D++
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A +LF MV GC + + L+ + + G +A+ L E M C
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCI 189
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+ L+ + F +VQ+L DM QG PN T+N L+D + + E
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++M S C PDV + N +R + G+ ++ + +G+ P I ++NIL+D Y K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + + + K +Y+ +ID RAG + +F+ M + P
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369
Query: 241 LCSLV 245
+ LV
Sbjct: 370 VIPLV 374
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L++ K+ D V +DM G PNT TY L+ + +A+ F E M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ C P+V++ + + ++D + + G QP++ T+ LL K G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + M V YN++ID F + GD+ + LF M + P+ T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G+ ++ S+ + + + + FN L+D + ++ E + M+ GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD V+Y T++R + G + A+
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRL 284
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 1/171 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A L + M+ G + S+ L+ Y +SG D A L + + +PD +Y
Sbjct: 277 KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-GLEPDAFSY 335
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +I +A + DM G P+ L+ R + E M+
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+C P + N + + + D + + + + G P + ++L++
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILET 446
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TYS +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKY-----HYSWTI------------------------------VTYNIV 209
+M +++ M + HY ++I VTY V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I ++G ++ F M ER+ P + SL+ + K +K ++ + + I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LDT+FFN ++D++ + E + + ++M + G KPD +TY T++ Y G + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 330 F 330
Sbjct: 536 L 536
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTY+++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + DTV + ++ + + E M P + Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ + + AKE ++E +D CL
Sbjct: 449 SLIHSLCIFDKWDKAKEL--ILEMLDRGICL 477
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 318 GRCTE---ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ P+TVTY T+I ++ +
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + D ++ + GI FN ++DS+ K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + R +++S + D + +N ++ + + A K + + +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 8/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI SC A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTY+ +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 334 GLKPEITTYGTLLQGYATKG 353
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 132/338 (39%), Gaps = 36/338 (10%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + G D+A + M+ PD TY +I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIG 417
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M + + P + YN+LI + + + + +++ML
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D N + + G++ EK ++ G++P I T++ L+D Y AG ++ + ++
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH- 250
M VTYN +I+ + + ++ LFR M S + P +T +++
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 251 ----AGKPEKLG---------------------------SVLRFIDN---SDIMLDTVFF 276
A K +G LR N +D+ L+T F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
N ++ A ++ E K + + G PD TY M
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 34/274 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + E A F+ M+DE + +L+ + +DKA L+ M + C
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TYS LI A D+ LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTYNTLI+ Y + + + +M S PD+ T N L+ +
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
NI+I A + G + + LF + + + P T
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +PD
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
S+VR G + G+ L ID L+ + +D
Sbjct: 729 SIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 164/327 (50%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ + AH LF M + +++ L++++G+ G+FD A S L+ M+ D+
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDL 225
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ + + K ++ S + GI P+ V YN++I+ YG+AK+F E L + +
Sbjct: 226 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 285
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M P+ + + L + + + + + + + T NI++D YG+
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + ++K +V+YN ++ +G A + +LFRLM+ + I+ + VT +
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + EK ++++ + + I + + ++ ++ +G+ + + ++ G
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY G+ HAK
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRL 492
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 5/316 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K +A L + M + G NT S++ LLS Y + F +A S+ MK +C D
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV-NCALD 329
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T +I+I + + L + I PN V+YNT++ YG A++F E
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M +D E +V T N ++ +G + + + ++ QS GI+P+ T++ ++ +GKAG
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + ++ V Y +I A+ R G M + RL+ ++ P +
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHAKRLLHELKL-PDNIPRE 505
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + AG+ E+ V R S + D F C+++ Y R + + + V E M+
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 303 GCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 566 GYFPDSNVIAMVLNAY 581
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 165/370 (44%), Gaps = 40/370 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q + ELF + S ++S R + ++ +LL+ +
Sbjct: 95 LLASIHQTQNEKELFSLL--STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYT 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V Y++++++ L+A FD L +M + + P+ TY+TLI ++G+ MF + L+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF-DSALS 211
Query: 121 LVKMLSED-------------------CE-----------------PDVWTMNCTLRAFG 144
++ + +D C+ PD+ N + +G
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ ++ AG+ P+ +++ LL Y + F + +V M++ + + +
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
T NI+ID +G+ +K+ + LF +R I+P+ V+ +++R YG A + + R +
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-M 323
DI + V +N ++ YG+ + +++ MQ RG +P+ +TY T++ + G +
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 324 KNHAKEFQDL 333
A FQ L
Sbjct: 452 DRAATLFQKL 461
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 141/349 (40%), Gaps = 30/349 (8%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLS--AYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KQPEK T SF AL Y RS D + E + + Q +
Sbjct: 61 KQPEKN--------------TTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEK 106
Query: 64 NTYSILIKSCLKAFAFDKVQALLS------------DMSTQGIR--PNTVTYNTLIDAYG 109
+S+L + + + +LLS D + + P+ YN ++
Sbjct: 107 ELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVL 166
Query: 110 RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
RAK F +M PD +T + + +FG G D+ +K + + +
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
++ L++ + + K ++ +++ + +V YN +I+ +G+A ++ L + M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+ P+ V+ +L+ Y K + SV + + LD N ++D YG+L
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
E + +++ +P+ V+Y T++R Y + A L+++ D
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 32/261 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + +A LF+ M + + N ++ ++ YG++ +KA +L++ M+ + +P+
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ-SRGIEPN 434
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFA 115
TYS +I KA D+ L + + G+ + V Y T+I AY R ++
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLH 494
Query: 116 EMEL-------TLVKMLSE--DCEPDVWTMN---------------CTLRAFGNSGQIDT 151
E++L T + +L++ E W C + + + +
Sbjct: 495 ELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 554
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + +EK ++AG P N ++L++YGK FEK V MQ+ + + ++
Sbjct: 555 VIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 614
Query: 212 AFGRAGDLKQMEYLFRLMRSE 232
+ D + +E LF+ + S+
Sbjct: 615 LYSSKKDFEMVESLFQRLESD 635
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A + F M + C N ++F L++ Y +G F+KA L M+ P
Sbjct: 115 GKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKR-GYSPG 173
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ + A + + +AL D+ PN TYN +I YG+A ++ E+
Sbjct: 174 PLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYR 233
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C P++ T + AF G E+ ++K Q +P +N L+++Y + G
Sbjct: 234 SMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGG 293
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + MQ+ V++NI+I+A+GRAG + E +F+ M+S P+ +
Sbjct: 294 SPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNM 353
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM--- 299
L+ AY AG+ E+ ++ ++ DT+ +N L++AYG +M+ +L M
Sbjct: 354 LLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKS 413
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+ KPD TY T+++ Y+ G A+E FQ L
Sbjct: 414 SSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLA 449
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K+ +A LF+ + C+ N ++ ++ YG++G KA L M+ C
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAM-CP 241
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ T++ L+ + + + + + + +P+ YN L++AY + A
Sbjct: 242 PNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEI 301
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M C PD + N + A+G +G + EK ++ QSAG P++ + +LL +Y +
Sbjct: 302 FQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYAR 361
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM---RSERIKPS 237
AG E+ ++ M++ + YN +I+A+G +G + ME L M S++ KP
Sbjct: 362 AGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPD 421
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L++ Y AG + + + + ++ D + L+ Y + K + + +L+
Sbjct: 422 IGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILK 481
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M + GC+ D VT R + A
Sbjct: 482 KMLESGCRADAVTARVLFSA 501
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 4/305 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +P KA L+++M C N +FTAL++A+ R GL+ +A + ++ D +
Sbjct: 218 IYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEF-DYK 276
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+ L+++ + + + M G P+TV++N LI+AYGRA ++ + E
Sbjct: 277 PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M S P++ + L A+ +G+++ E+ + G +P +N L+++YG
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGV 396
Query: 181 AGHFEKMSAVMEYMQKYHYSWT---IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+G E M A++ M K T I TYN +I + +AG + + E LF+ + ++ P
Sbjct: 397 SGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPD 456
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ Y K S+L+ + S D V L A + ++ ++E
Sbjct: 457 ATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLME 516
Query: 298 VMQQR 302
+Q R
Sbjct: 517 SLQGR 521
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD+ Y++LI + K+ + + + M PN T+ LI+ Y A F + E
Sbjct: 101 RPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
V+M P N L ++ + E + + +P+I+T+N ++ YG
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG K + M++ I T+ +++AF R G ++ E F ++ KP
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHY 280
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ AY G P + + + + DTV N L++AYGR + + + + + M
Sbjct: 281 AYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
Q G P+ + ++ AY+ G A+E +E+
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMER 377
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGK---------------------------------- 180
C Q +P + +N+L+D+YGK
Sbjct: 91 CEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYR 150
Query: 181 -AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG FEK + MQK YS + N + A + ++ E LFR + +P+
Sbjct: 151 LAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNID 210
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++ YG AG+P K + R + + + F L++A+ R + E + + +
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL 270
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
Q+ KPD Y ++ AYS G A E FQ +
Sbjct: 271 QEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 163/355 (45%), Gaps = 35/355 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+FQ M + GC T +F L+ YG +++ LLE M T + +P+ TY+I
Sbjct: 144 KEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNI 203
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + K + + ++ M G++P+ VTYNTL AY + + E +V ML++
Sbjct: 204 LVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKK 263
Query: 129 ---------------CE--------------------PDVWTMNCTLRAFGNSGQIDTME 153
CE P++ N ++ F + G D ++
Sbjct: 264 VNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVD 323
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + +G++P + TF+ +++ + AG +K + + M K I ++I+ F
Sbjct: 324 KALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGF 383
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
RAG+ + E L M ++P+ V +++ + AGK EK V + + D+ +
Sbjct: 384 VRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNL 443
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
F L+ YG K + +L++M++ P+ T + + A+ + GM N AK
Sbjct: 444 KTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAK 498
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 155/368 (42%), Gaps = 46/368 (12%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++A +F ++V++G T ++TAL++A R F LL M+ T +PD
Sbjct: 72 KPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEET-GIKPD---- 126
Query: 67 SILIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYG------------- 109
SIL+ + + AF+ + + M G +P T T+NTLI YG
Sbjct: 127 SILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLE 186
Query: 110 -----------------------RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ K E + +ML+ +PDV T N RA+
Sbjct: 187 LMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQD 246
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + E + + P+ T I++ Y + G+ + V+ M+ +V +
Sbjct: 247 GETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIF 306
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I F GD ++ +M +KP +T +++ + AG+ +K + +
Sbjct: 307 NSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLK 366
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
S I D F+ L + R + + +L M + G +P+ V + T++ + T G M+
Sbjct: 367 SGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEK 426
Query: 326 HAKEFQDL 333
K F+ +
Sbjct: 427 AWKVFEHM 434
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P TY+ L+ + + F + LLS+M GI+P+++ N +I+A+ + E
Sbjct: 89 RPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAME 148
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSY 178
KM C+P T N ++ +G + + K E ++ ++P+ T+NIL+ +
Sbjct: 149 IFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGAL 208
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K ++ V+ M +VTYN + A+ + G+ + E + M ++++ P+
Sbjct: 209 CKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNE 268
Query: 239 VTLCSLVRAYGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +V Y G E L V R D I + V FN L+ + + + L
Sbjct: 269 RTCGIIVGGYCEQGNLAEALRVVYRMRD-LGIHPNLVIFNSLIKGFLDIGDSDGVDKALT 327
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+M++ G KPD +T+ T++ +S+ G + +E F D+++
Sbjct: 328 MMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLK 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T+ + +++ G ++ +++F + + +P+ VT +LV A + + + +L
Sbjct: 56 TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLL 115
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ + I D++ N +++A+ E + + M++ GCKP T+ T+++ Y
Sbjct: 116 SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGY--- 172
Query: 322 GMKNHAKEFQDLVEKMDET 340
G+ +E L+E M T
Sbjct: 173 GIIRKPEESMKLLELMTRT 191
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + + A ++F+ + C + +++ L++ ++G D+A L E M+
Sbjct: 154 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN-S 212
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C+PDV T++ L+ K + Q +L M + PN +TY++LID + + +
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M+ EP+V T N + F + +D+ E+ + G P I T+N L+D
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + + + M+ + ++TY+ +I F + + LF M + + P
Sbjct: 333 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 392
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +LV Y +AG + +L + SD D + LVD + ++ E + VL+
Sbjct: 393 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 452
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M +RGC+P+ VTY ++ A+ G
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAG 476
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 4/339 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + ++A ++ + M D C N ++++L+ ++G A + + M
Sbjct: 224 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRG 282
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P+V TY+ LI D L+ +M+ G P+ +TYNTLID + E
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M ++ C PDV T +C + F +ID ++ + P + TF+ L++ Y
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
AG + ++E M S + TY ++D F + G + + + + M +P+
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ A+ AGKP +L + + + + + + L+ + E + +LE
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522
Query: 299 MQQ-RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+++ CK D YR M+ G + A E + +++
Sbjct: 523 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 561
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 40/354 (11%)
Query: 3 GKCKQ---PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK PE A F M +G N ++ L++ + + +A+ LL+ MK +
Sbjct: 16 GLCKANRLPE-ATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES-GL 73
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS +I + D L M G PN VTYNTL+ R + E
Sbjct: 74 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 133
Query: 120 TLVKMLSE-----------------------------------DCEPDVWTMNCTLRAFG 144
L +M DC PDV + +
Sbjct: 134 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 193
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G++D K +EK + +P + TF L+D K ++ V+E M+ + + ++
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY+ +ID + G ++ + +F+ M I+P+ VT SL+ + + ++ +
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + D + +N L+D + E + M+ + C PD +TY ++ +
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 116/272 (42%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+C+ +V T++I+I KA + + M +G PN TYN LI+ + +
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L L +M P+V T + + F ++DT K + + G P++ T+N LL
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G ++ +++ M++ +Y+ ++ + G + +F + P
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V +L+ G+ ++ + + + D V F L+D + E + VLE
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M+ R C P+ +TY +++ G A+E
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 273
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 1/143 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P A++L + MV G N ++ +L+ + +G ++A +LE ++ +C+ D+ Y
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
+++ + LL + G P Y LI + K + ME+ L
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 596
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQ 148
S P+ ++ G+
Sbjct: 597 SRKSRPNAEAYEAVIQELAREGR 619
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + + A ++F+ + C + +++ L++ ++G D+A L E M+
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN-S 331
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C+PDV T++ L+ K + Q +L M + PN +TY++LID + + +
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M+ EP+V T N + F + +D+ E+ + G P I T+N L+D
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 451
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + + + M+ + ++TY+ +I F + + LF M + + P
Sbjct: 452 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 511
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +LV Y +AG + +L + SD D + LVD + ++ E + VL+
Sbjct: 512 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 571
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M +RGC+P+ VTY ++ A+ G
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAG 595
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 4/339 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + ++A ++ + M D C N ++++L+ ++G A + + M
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRG 401
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P+V TY+ LI D L+ +M+ G P+ +TYNTLID + E
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M ++ C PDV T +C + F +ID ++ + P + TF+ L++ Y
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
AG + ++E M S + TY ++D F + G + + + + M +P+
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ A+ AGKP +L + + + + + + L+ + E + +LE
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641
Query: 299 MQQ-RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+++ CK D YR M+ G + A E + +++
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 680
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 141/338 (41%), Gaps = 6/338 (1%)
Query: 3 GKCKQ---PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK PE A F M +G N ++ L++ + + +A+ LL+ MK +
Sbjct: 135 GLCKANRLPE-ATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES-GL 192
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS +I + D L M G PN VTYNTL+ R + E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M +PD ++ + + +G+ID K +E + P + ++ L+
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG ++ + E M++ +VT+ ++D + L++ + + M P+ +
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ G+ V + + I + V +N L+ + ++E M
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
GC PD +TY T++ G A F D+ K
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 6/329 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA EL + M + G + + ++ A ++ KA M +C+
Sbjct: 68 GLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM----ECE 123
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V T++I+I KA + + M +G PN TYN LI+ + + L
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M P+V T + + F ++DT K + + G P++ T+N LL +
Sbjct: 184 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 243
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ +++ M++ +Y+ ++ + G + +F + P V
Sbjct: 244 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AG+ ++ + + + D V F L+D + E + VLE M+
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
R C P+ +TY +++ G A+E
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQE 392
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 8/333 (2%)
Query: 8 PEKAHELFQ-AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
P+ A F A +G D N ++ L A R+ D+ +L++ P P+V TY
Sbjct: 4 PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKN-GWPPGITPNVFTY 62
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++I+ K+ DK LL +M G P+ YN +I A +A+ A+ L S
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK---ALDYFRS 119
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+CE +V T + + ++ + K + G P+ T+N+L++ + K +
Sbjct: 120 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 179
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ M++ + +VTY+ VI F R + LFR M P+ VT +L+
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 239
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G ++ +L + + D ++ L+ + V E C P
Sbjct: 240 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 299
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
D V Y T++ G + A + L EKM E
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACK---LFEKMRE 329
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P A+ L + MV G N ++ +L+ + +G ++A +LE ++ +C+ D+ Y
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
+++ + LL + G P Y LI + K + ME+ L
Sbjct: 656 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 715
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQ 148
S P+ ++ G+
Sbjct: 716 SRKSRPNAEAYEAVIQELAREGR 738
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A + F M + C N ++F L++ Y +G F+KA L M+ P
Sbjct: 115 GKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKR-GYSPG 173
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ + A + + +AL D+ PN TYN +I YG+A ++ E+
Sbjct: 174 PLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYR 233
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C P++ T + AF G E+ ++K Q +P +N L+++Y + G
Sbjct: 234 SMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGG 293
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + MQ+ V++NI+I+A+GRAG + E +F+ M+S P+ +
Sbjct: 294 SPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNM 353
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM--- 299
L+ AY AG+ E+ ++ ++ DT+ +N L++AYG +M+ +L M
Sbjct: 354 LLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKS 413
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+ KPD TY T+++ Y+ G A+E FQ L
Sbjct: 414 SSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLA 449
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K+ +A LF+ + C+ N ++ ++ YG++G KA L M+ C
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAM-CP 241
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ T++ L+ + + + + + + +P+ YN L++AY + A
Sbjct: 242 PNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEI 301
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M C PD + N + A+G +G + EK ++ QSAG P++ + +LL +Y +
Sbjct: 302 FQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYAR 361
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM---RSERIKPS 237
AG E+ ++ M++ + YN +I+A+G +G + ME L M S++ KP
Sbjct: 362 AGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPD 421
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L++ Y AG K + + + ++ D + L+ Y + K + + +L+
Sbjct: 422 IGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILK 481
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M + GC+ D VT R + A
Sbjct: 482 KMLESGCRADAVTARVLFSA 501
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 4/305 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +P KA L+++M C N +FTAL++A+ R GL+ +A + ++ D +
Sbjct: 218 IYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEF-DYK 276
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+ L+++ + + + M G P+TV++N LI+AYGRA ++ + E
Sbjct: 277 PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M S P++ + L A+ +G+++ E+ + G +P +N L+++YG
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGV 396
Query: 181 AGHFEKMSAVMEYMQKYHYSWT---IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+G E M A++ M K T I TYN +I + +AG + + E LF+ + ++ P
Sbjct: 397 SGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPD 456
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ Y K S+L+ + S D V L A + ++ ++E
Sbjct: 457 ATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLME 516
Query: 298 VMQQR 302
+Q R
Sbjct: 517 SLQGR 521
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD+ Y++LI + K+ + + + M PN T+ LI+ Y A F + E
Sbjct: 101 RPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
V+M P N L ++ + E + + +P+I+T+N ++ YG
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG K + M++ I T+ +++AF R G ++ E F ++ KP
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHY 280
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ AY G P + + + + DTV N L++AYGR + + + + + M
Sbjct: 281 AYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
Q G P+ + ++ AY+ G A+E +E+
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMER 377
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGK---------------------------------- 180
C Q +P + +N+L+D+YGK
Sbjct: 91 CEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYR 150
Query: 181 -AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG FEK + MQK YS + N + A + ++ E LFR + +P+
Sbjct: 151 LAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNID 210
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++ YG AG+P K + R + + + F L++A+ R + E + + +
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL 270
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
Q+ KPD Y ++ AYS G A E FQ +
Sbjct: 271 QEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TYS +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKY-----HYSWTI------------------------------VTYNIV 209
+M +++ M + HY ++I VTY V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I ++G ++ F M ER+ P + SL+ + K +K ++ + + I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LDT+FFN ++D++ + E + + ++M + G KPD +TY T++ Y G + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 330 F 330
Sbjct: 536 L 536
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTY+++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + DTV + ++ + + E M P + Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ + + AKE ++E +D CL
Sbjct: 449 SLIHSLCIFDKWDKAKEL--ILEMLDRGICL 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 318 GRCTE---ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ P+TVTY T+I ++ +
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + D ++ + GI FN ++DS+ K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + R +++S + D + +N ++ + + A K + + +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 8/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI SC A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTY+ +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 334 GLKPEITTYGTLLQGYATKG 353
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 36/338 (10%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + G D+A + M+ PD TY +I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIG 417
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M + + P + YN+LI + + + + +++ML
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D N + + G++ EK ++ G++P I T++ L+D Y AG ++ + ++
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--- 248
M VTYN +I+ + + ++ LFR M S + P +T +++
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 249 -------------GHAGKPEKLGS----------------VLRFIDN---SDIMLDTVFF 276
+G +L + LR N +D+ L+T F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
N ++ A ++ E K + + G PD TY M
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 34/274 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + E A F+ M+DE + +L+ + +DKA L+ M + C
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TYS LI A D+ LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTYNTLI+ Y + + + +M S PD+ T N L+ +
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
NI+I A + G + + LF + + + P T
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +PD
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
S+VR G + G+ L ID L+ + +D
Sbjct: 729 SIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TYS +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKY-----HYSWTI------------------------------VTYNIV 209
+M +++ M + HY ++I VTY V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I ++G ++ F M ER+ P + SL+ + K +K ++ + + I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LDT+FFN ++D++ + E + + ++M + G KPD +TY T++ Y G + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 330 F 330
Sbjct: 536 L 536
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTY+++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + DTV + ++ + + E M P + Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ + + AKE ++E +D CL
Sbjct: 449 SLIHSLCIFDKWDKAKEL--ILEMLDRGICL 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 318 GRCTE---ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ P+TVTY T+I ++ +
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + D ++ + GI FN ++DS+ K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + R +++S + D + +N ++ + + A K + + +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 8/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI SC A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTY+ +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 334 GLKPEITTYGTLLQGYATKG 353
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 36/338 (10%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + G D+A + M+ PD TY +I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIG 417
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M + + P + YN+LI + + + + +++ML
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D N + + G++ EK ++ G++P I T++ L+D Y AG ++ + ++
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--- 248
M VTYN +I+ + + ++ LFR M S + P +T +++
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 249 -------------GHAGKPEKLGS----------------VLRFIDN---SDIMLDTVFF 276
+G +L + LR N +D+ L+T F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
N ++ A ++ E K + + G PD TY M
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 34/274 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + E A F+ M+DE + +L+ + +DKA L+ M + C
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TYS LI A D+ LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTYNTLI+ Y + + + +M S PD+ T N L+ +
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
NI+I A + G + + LF + + + P T
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +PD
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
S+VR G + G+ L ID L+ + +D
Sbjct: 729 SIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 2/335 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + + + + M+ GC NT ++ LL + ++ F++A S+ M C
Sbjct: 26 VLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA-AQGCS 84
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V +YSILI + D+ LL++M G +PN VTY +L+ + E
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PD N + F G + + +E+ G P++ T+N LL + +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F ++ ++ + M + I T+N ++D F + GD+ + LF MRS P V+
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+R GKP + +LR + S + D V +N L+D Y + + +
Sbjct: 265 YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
+ G +PD +Y T++ G A F+D++
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A +LF MV GC + + L+ + + G +A+ L E M C
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCI 189
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+ L+ + F +VQ+L DM QG PN T+N L+D + + E
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++M S C PDV + N +R + G+ ++ + +G+ P I ++NIL+D Y K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + + + K +Y+ +ID RAG + +F+ M + P
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369
Query: 241 LCSLV 245
+ LV
Sbjct: 370 VIPLV 374
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L++ K+ D V +DM G PNT TY L+ + +A+ F E M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ C P+V++ + + ++D + + G QP++ T+ LL K G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + M V YN++ID F + GD+ + LF M + P+ T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G+ ++ S+ + + + + FN L+D + ++ E + M+ GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD V+Y T++R + G + A+
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRL 284
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 3/179 (1%)
Query: 1 MLGKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C + P +A L + M+ G + S+ L+ Y +SG D A L + +
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-G 327
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD +YS +I +A + DM G P+ L+ R + E
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
M+ +C P + N + + + D + + + + G P + ++L++
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILET 446
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 7/349 (2%)
Query: 1 MLGKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK+ +KA +L + M NT+++T ++ A+ + G+ D A SLL MK
Sbjct: 185 MNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQK-S 243
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TYS LI + K ++ V+ L +M I PN T+N++ID + + E
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ M+ + +PDV T N + +G GQ+D + ++ + I+P I ++NIL++ Y
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGY 363
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++ V + + +IVT N+++ G K + F M S P
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T C+L+ Y G E+ S ++ + + ++D + + E
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETCLAMKR 346
+ G PD +TY M+ Y G+ + AK D++ KM D CLA R
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAK---DMLRKMEDNGCLADNR 529
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 1/321 (0%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
+G N +FT L+ A L + + C+P+ Y ++ K
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K LL M +PNT TY +IDA+ + M L +M + PD++T + +
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
A Q + + + + I P++ TFN ++D K G E +M YM +
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
++TYN++ID +G G + + +F M ++ I+P ++ L+ Y K ++ V
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
R I + V N L+ L + + M G PD T+ T++ Y
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435
Query: 321 NGMKNHA-KEFQDLVEKMDET 340
NG+ A F L + ++T
Sbjct: 436 NGLVEEAMSHFHKLERRREDT 456
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 1/296 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q E LF M+ N +F +++ + G + A ++ +M P
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK-GVDP 316
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+++I D+ + + M + I P+ ++YN LI+ Y R K E
Sbjct: 317 DVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVC 376
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ + +P + T N L G+ + + +++ SAG P + T LL Y K
Sbjct: 377 REISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKN 436
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ + +++ I Y VID + G L + F + + P +T
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+++ Y G ++ +LR ++++ + D +N +V + R +EMK LE
Sbjct: 497 TAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLE 552
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 6/314 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY-- 66
+ A LF+ MV + SF+ LL A + SL + + V+ +
Sbjct: 54 DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK---LRIPVHEFIL 110
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
SI++ SC D ++L+ +GI N VT+ TLI + K++
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E+ CEP+ + G + +P+ T+ I++D++ K G +
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++++ M++ I TY+ +IDA + + + LF M I P+ T S++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
GK E ++R++ + D + +N ++D YG + + + M + +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 306 PDKVTYRTMVRAYS 319
PD ++Y ++ Y+
Sbjct: 351 PDIISYNILINGYA 364
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 3/281 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A E+ + M+++G D + ++ ++ YG G D+A + + M N +
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK-SIE 350
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ +Y+ILI + D+ + ++S +G++P+ VT N L+ +
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+MLS PD++T L + +G ++ + K + +I + ++D K
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +K A E + ++TY +I + + G L + + + R M T
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR + + K ++ + L I + L+D
Sbjct: 531 YNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K A F M+ G + + LL Y ++GL ++A S ++ +
Sbjct: 401 LGRTKS---AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE-DT 456
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ +I K DK A + G+ P+ +TY +I Y + + E + L
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM C D T N +R F S ++ M+ E+ T +L+D
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 4/342 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ Q M GC + ++ +L+S+Y + GL ++A +L + M+ +PD
Sbjct: 271 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPD 329
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +A D +M G +PN TYN LI +G F EM
Sbjct: 330 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 389
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ S PD+ T N L FG +G + +++ + AG P +T+ L+ SY + G
Sbjct: 390 EFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 449
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F+ + + M + + TYN V+ A R G +Q E LF M KP +
Sbjct: 450 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 509
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A + +K+ ++ I + I LV ++ AE + ++Q+
Sbjct: 510 SLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 569
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
C D MV Y N M ++ + ++ M E+ + +
Sbjct: 570 RCSLDINVLNAMVSIYGKNRM---VRKVEKILSLMKESAINL 608
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK- 75
A++D + ++TAL+SA+ R+G F A ++ M ++ QP + TY++++ K
Sbjct: 144 ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS-GVQPAIVTYNVVLHVYSKM 202
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
A + +V L++ M G+ P+ TYNTLI R ++ E +M + EPD T
Sbjct: 203 AVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 262
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N L +G + + D + ++ + G PS+ T+N L+ SY K G E+ A+ + M+
Sbjct: 263 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 322
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+VTY +I RAG + + M KP+ T +L++ +G GK
Sbjct: 323 VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 382
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++ +V ++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++
Sbjct: 383 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 442
Query: 316 RAYSTNGM 323
+YS G+
Sbjct: 443 SSYSRCGL 450
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD A + + M PDV+TY+ ++ +
Sbjct: 422 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSAL 480
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M + +P+ +Y++L+ AY AK +M+ + SE EP
Sbjct: 481 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 540
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
W + + + EK + + + IN N ++ YGK K+ ++
Sbjct: 541 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 600
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ + + TYN ++ + R GD ++ E + ++S ++P + +++ AYG G+
Sbjct: 601 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 660
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S + D V +N V +Y F E ++ M +GCKP++ TY +
Sbjct: 661 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 720
Query: 314 MVRAYSTNGMKNHAKEF 330
+V Y NG AK F
Sbjct: 721 IVEGYCRNGKLTDAKIF 737
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A +F+ MVD G ++ +L Y + + + + L+ MK PD TY+ L
Sbjct: 173 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH-GVAPDRYTYNTL 231
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I C + + + + +M G P+ VT+N+L+D YG+A+ E + +M C
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 291
Query: 130 EPDVWTMNCTLRAF-----------------------------------GNSGQIDTMEK 154
P V T N + ++ +G+ID
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Y++ G +P++ T+N L+ +G G F +M AV + + + IVT+N ++ FG
Sbjct: 352 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 411
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G ++ +F+ M+ P T SL+ +Y G + + + + + I D
Sbjct: 412 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 471
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N ++ A R + + + + M++R CKPD+ +Y +++ AY+ + K D
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 529
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F + + C + A++S YG++ + K +L MK + TY+ L
Sbjct: 558 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAATYNSL 616
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + +K + +L+++ + G+RP+ +YNT+I AYGR E +M
Sbjct: 617 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 676
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PDV T N ++++ ++ + + + G +P+ T+N +++ Y + G
Sbjct: 677 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 736
Query: 190 VMEYMQKYHYSWT 202
+ + + H ++
Sbjct: 737 FVSNLPQLHPGYS 749
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C EK + + G + S+ ++ AYGR G +A L MK + +P
Sbjct: 623 LGDC---EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKP 678
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR 110
DV TY+I +KS + F++ L+ M TQG +PN TYN++++ Y R
Sbjct: 679 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G Q E+A L M +EG N +F+A +SA G++G + A ++L M+ +C P+
Sbjct: 158 GNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMR-AANCPPN 216
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ I +C KA + Q LL++M +G+ PN +T+N+ I A G + E L
Sbjct: 217 VQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLR 276
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M S +P++W+ + A G++ + +E+ +S GI+ +F +D+ + G
Sbjct: 277 DMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGG 336
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+E A+++ M+ T+ +++ I A G+ + L R M + P+ V+
Sbjct: 337 AWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFN 396
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + A G AG+ S+L + ++ + T+ +N ++ A G+ K +A VL M
Sbjct: 397 AAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWARAVSVLREMLAG 456
Query: 303 GCKPD 307
K D
Sbjct: 457 QAKTD 461
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L M G N +F++ ++A G +G +++A LL+ M P+ T+S
Sbjct: 129 QRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEE-GVPPNEFTFSA 187
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ +C KA + +L M PN TY IDA G+A + + L +M +
Sbjct: 188 AVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKG 247
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+V T N + A GN GQ S G+QP++ ++ + + G + +
Sbjct: 248 VAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARAL 307
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV E M+ V++ IDA + G + L MR E I P+ + + + A
Sbjct: 308 AVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISAC 367
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + ++LR ++ + + V FN +DA GR + +L+ M G
Sbjct: 368 GKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGT 427
Query: 309 VTYRTMVRA 317
+TY ++ A
Sbjct: 428 ITYNAVIAA 436
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 11/314 (3%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
L + GR G + +A + ++ DV TYS+L+ + ++ +++V LL M ++G
Sbjct: 41 LKSQGRKGQWKEALTA-ANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEG 99
Query: 94 IRPNTVTYNTLIDAYGRA----KMFAEMELTLVKMLSE----DCEPDVWTMNCTLRAFGN 145
+ P+ + ++A + + A ++ +++L E P+V T + + A GN
Sbjct: 100 VAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGN 159
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+GQ + ++ G+ P+ TF+ + + GKAG + ++ M+ + + T
Sbjct: 160 AGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQT 219
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y IDA G+AG+ + + L MR + + P+ +T S + A G+ G+ ++ ++LR +
Sbjct: 220 YTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMP 279
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + + + V A G +A V E M+ RG + D+V++ + A + G
Sbjct: 280 SMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWE 339
Query: 326 HAKEFQDLVEKMDE 339
A D E DE
Sbjct: 340 MALALLD--EMRDE 351
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 11/242 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG Q ++A L + M G N S+TA ++A G + + +A ++ E M++ +
Sbjct: 262 LGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSR-GIRG 320
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +++ I +C + A++ ALL +M +GI P +++T I A G+ + + L
Sbjct: 321 DEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALL 380
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M P+ + N + A G +GQ +K SAG+ T+N ++ + GK
Sbjct: 381 REMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKG 440
Query: 182 GHFEKMSAVMEYMQKYHYS----------WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ + +V+ M +V+Y+ IDA RAG+ ++ L L+R
Sbjct: 441 KEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEAISLVELLRR 500
Query: 232 ER 233
+R
Sbjct: 501 DR 502
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 4/342 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ ++A E+ Q M GC + ++ +L+S+Y + GL ++A +L + M+ +PD
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPD 347
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +A D +M G +PN TYN LI +G F EM
Sbjct: 348 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 407
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ S PD+ T N L FG +G + +++ + AG P +T+ L+ SY + G
Sbjct: 408 EFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F+ + + M + + TYN V+ A R G +Q E LF M KP +
Sbjct: 468 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 527
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A + +K+ ++ I + I LV ++ AE + ++Q+
Sbjct: 528 SLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
C D MV Y N M ++ + ++ M E+ + +
Sbjct: 588 RCSLDINVLNAMVSIYGKNRM---VRKVEKILSLMKESAINL 626
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK- 75
A++D + ++TAL+SA+ R+G F A ++ M ++ QP + TY++++ K
Sbjct: 162 ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS-GVQPAIVTYNVVLHVYSKM 220
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
A + +V L++ M G+ P+ TYNTLI R ++ E +M + EPD T
Sbjct: 221 AVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 280
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N L +G + + D + ++ + G PS+ T+N L+ SY K G E+ A+ + M+
Sbjct: 281 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+VTY +I RAG + + M KP+ T +L++ +G GK
Sbjct: 341 VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++ +V ++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++
Sbjct: 401 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460
Query: 316 RAYSTNGM 323
+YS G+
Sbjct: 461 SSYSRCGL 468
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD A + + M PDV+TY+ ++ +
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSAL 498
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M + +P+ +Y++L+ AY AK +M+ + SE EP
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
W + + + EK + + + IN N ++ YGK K+ ++
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M++ + + TYN ++ + R GD ++ E + ++S ++P + +++ AYG G+
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + S + D V +N V +Y F E ++ M +GCKP++ TY +
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 314 MVRAYSTNGMKNHAKEF 330
+V Y NG AK F
Sbjct: 739 IVEGYCRNGKLTDAKIF 755
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A +F+ MVD G ++ +L Y + + + + L+ MK PD TY+ L
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH-GVAPDRYTYNTL 249
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I C + + + + +M G P+ VT+N+L+D YG+A+ E + +M C
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 130 EPDVWTMNCTLRAF-----------------------------------GNSGQIDTMEK 154
P V T N + ++ +G+ID
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Y++ G +P++ T+N L+ +G G F +M AV + + + IVT+N ++ FG
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 429
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G ++ +F+ M+ P T SL+ +Y G + + + + + I D
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 489
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N ++ A R + + + + M++R CKPD+ +Y +++ AY+ + K D
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F + + C + A++S YG++ + K +L MK + TY+ L
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAATYNSL 634
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + +K + +L+++ + G+RP+ +YNT+I AYGR E +M
Sbjct: 635 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 694
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PDV T N ++++ ++ + + + G +P+ T+N +++ Y + G
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754
Query: 190 VMEYMQKYHYSWT 202
+ + + H ++
Sbjct: 755 FVSNLPQLHPGYS 767
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C EK + + G + S+ ++ AYGR G +A L MK + +P
Sbjct: 641 LGDC---EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKP 696
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR 110
DV TY+I +KS + F++ L+ M TQG +PN TYN++++ Y R
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 168/345 (48%), Gaps = 11/345 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ AH LF M +G + +++ L++++G+ GLFD + L+ M+ + D+
Sbjct: 147 RAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQD-NVSGDL 205
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI K + K ++ S + I P+ + YN++I+ +G+AK+F E L L +
Sbjct: 206 VLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQE 265
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M +PD + + L + ++ + + + A + T NI++D YG+
Sbjct: 266 MRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHM 325
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K +V+YN ++ +G A + +LFRLM+S+ ++ + VT +
Sbjct: 326 PKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNT 385
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ YG + EK ++++ + I + + ++ ++ + + + + ++ G
Sbjct: 386 MINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSG 445
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ D+V Y+TM+ AY G+ HAK +KRPD
Sbjct: 446 VRIDEVLYQTMIVAYERAGLVAHAKRL----------LHELKRPD 480
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 5/307 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L Q M D +T S++ LL+ Y + F +A SL M N C
Sbjct: 249 VFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEM-NEAKCP 307
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI+PN V+YNTL+ YG A +F E
Sbjct: 308 LDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHL 367
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M S+D + +V T N + +G + + + ++ + GI+P+ T++ ++ + K
Sbjct: 368 FRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEK 427
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 428 AGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 483
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F C+++ + + K + + V E M+
Sbjct: 484 RDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMR 543
Query: 301 QRGCKPD 307
G PD
Sbjct: 544 VVGYFPD 550
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 160/362 (44%), Gaps = 37/362 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q + EL+ M + S ++S R + +A +LL+ + +
Sbjct: 75 LLAAIGQTQNEDELYAVM--SPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYS 132
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF------ 114
P + Y++L+++ L+A + L +M +G+ P+ TY+TLI ++G+ +F
Sbjct: 133 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFW 192
Query: 115 -AEME--------------LTLVKMLSE--------------DCEPDVWTMNCTLRAFGN 145
+ME + L + LS+ PD+ N + FG
Sbjct: 193 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGK 252
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ ++ + +QP +++ LL Y F + ++ M + + T
Sbjct: 253 AKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTT 312
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
NI+ID +G+ K+ + LF MR I+P+ V+ +L+R YG A + + R +
Sbjct: 313 CNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ 372
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ D+ + V +N +++ YG+ + +++ M++RG +P+ +TY T++ + G +
Sbjct: 373 SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLD 432
Query: 326 HA 327
A
Sbjct: 433 RA 434
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 40/265 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ P++A LF +M G N S+ LL YG + LF +A L M+ + D Q +
Sbjct: 321 GQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ-SKDVQQN 379
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID---------------- 106
V TY+ +I K +K L+ +M +GI PN +TY+T+I
Sbjct: 380 VVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQ 439
Query: 107 -------------------AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
AY RA + A + ++L E PD + + +G
Sbjct: 440 KLRSSGVRIDEVLYQTMIVAYERAGLVAHAK----RLLHELKRPDNIPRDTAIGILARAG 495
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+I+ + + A I+ F +++ + K + + V E M+ Y
Sbjct: 496 RIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIA 555
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSE 232
+V++AFG+ + + + L+R M E
Sbjct: 556 LVLNAFGKLREFDKADALYRQMHEE 580
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 118/261 (45%), Gaps = 1/261 (0%)
Query: 79 FDKVQALLSDMSTQGI-RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ + ALL ++ + + P+ YN L+ RAK + +M + PD +T +
Sbjct: 115 WQRALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYS 174
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ +FG G D+ ++ + + + ++ L+D K + K ++ ++
Sbjct: 175 TLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAS 234
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
S ++ YN +I+ FG+A ++ L + MR ++P V+ +L+ Y K +
Sbjct: 235 TISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEA 294
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S+ ++ + LD N ++D YG+L E + M++ G +P+ V+Y T++R
Sbjct: 295 LSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRV 354
Query: 318 YSTNGMKNHAKEFQDLVEKMD 338
Y + A L++ D
Sbjct: 355 YGEADLFGEAIHLFRLMQSKD 375
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 22/350 (6%)
Query: 2 LGKCKQPEKAHELFQAM-------VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK 54
LGK + + E+F+ M D GC ++ L+S G+ G A L M+
Sbjct: 63 LGKTDKWLQCLEVFRWMQKQRWYVADNGC------YSKLISVMGKKGQTRMAMWLFSEMR 116
Query: 55 NTPDCQPDVNTYSILIKSCL----KAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYG 109
N+ C+PD + Y+ LI + L KA + K A M S + +PN VTYN ++ A+
Sbjct: 117 NS-GCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFA 175
Query: 110 RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
+A+ ++ + PD++T N L A+G +G I ME + + +P I
Sbjct: 176 QARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDII 235
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
TFN+L+DSYGK FEKM V + + + T+ T+N +I +G+A + E +F+ M
Sbjct: 236 TFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKM 295
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
R PS +T SL+ YG K + + S + N +++ Y
Sbjct: 296 ADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVYCMNGLH 355
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
E +LE + G P+ TY+ + RAY+ MK Q L++ MD+
Sbjct: 356 MEAHILLENARSIGVPPNSSTYKLLYRAYTKAKMKELV---QKLLKHMDK 402
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 42/321 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ ++ KA + E MK+
Sbjct: 98 VMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSI 157
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQAL------------------------------- 85
CQP+V TY+I++++ +A ++V AL
Sbjct: 158 ERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIRE 217
Query: 86 ----LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
LS M +P+ +T+N LID+YG+ + F +ME +L +P + T N +
Sbjct: 218 MESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIV 277
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+G + D E ++K PS TF L+ YG K + + M +
Sbjct: 278 NYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEV 337
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ T N V++ + G + L RS + P+ T L RAY A E + +L
Sbjct: 338 KVSTLNAVLNVYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAYTKAKMKELVQKLL 397
Query: 262 RFIDNSDIMLDTVFFNCLVDA 282
+ +D I+ + FF VDA
Sbjct: 398 KHMDKDGIIPNKRFF---VDA 415
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 154/309 (49%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 309 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 367
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ +M E
Sbjct: 368 ILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG 427
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +++ + + T+NI+++ G+ +E +
Sbjct: 428 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVE 487
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 488 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAY 547
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + TV N L++A+G + AE VL+ M++ G +PD
Sbjct: 548 AQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDV 607
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 608 ITYTTLMKA 616
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ + P+ A EL + G + + TAL+S+ G + +A +L + +P
Sbjct: 232 ARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPR 291
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K +K + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 292 TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 351
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G+ + ++G++P + +N+++D++GK
Sbjct: 352 EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYN 411
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ M++ +VT+N +IDA + G + LF MR T
Sbjct: 412 CLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYN 471
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + E + ++L + ++ + + + LVD YGR F E +E M+
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHA 556
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 154/312 (49%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M + +PD + Y++
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYNV 402
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K M +GI P+ VT+NTLIDA+ GR E+ +M
Sbjct: 403 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL---FDEMR 459
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C T N + G + + +E + + G+ P+I T+ L+D YG++G F+
Sbjct: 460 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 519
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + MR++ ++ S V L SL+
Sbjct: 520 EAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 579
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 580 NAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCA 639
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 640 PDRKA-RAMLRS 650
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ E + M ++G N ++T L+ YGRSG F +A +E MK +
Sbjct: 476 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD-GLK 534
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+LI+A+G + AE
Sbjct: 535 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 594
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q + + YE+ ++G P
Sbjct: 595 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 640
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 154/309 (49%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 309 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 367
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ +M E
Sbjct: 368 ILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG 427
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +++ + + T+NI+++ G+ +E +
Sbjct: 428 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVE 487
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 488 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAY 547
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + TV N L++A+G + AE VL+ M++ G +PD
Sbjct: 548 AQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDV 607
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 608 ITYTTLMKA 616
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ + P+ A EL + G + + TAL+S+ G + +A +L + +P
Sbjct: 232 ARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPR 291
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K +K + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 292 TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 351
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G+ + ++G++P + +N+++D++GK
Sbjct: 352 EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYN 411
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ M++ +VT+N +IDA + G + LF MR T
Sbjct: 412 CLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYN 471
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + E + ++L + ++ + + + LVD YGR F E +E M+
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHA 556
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 154/312 (49%), Gaps = 8/312 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M + +PD + Y++
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYNV 402
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKML 125
+I + K M +GI P+ VT+NTLIDA+ GR E+ +M
Sbjct: 403 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL---FDEMR 459
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C T N + G + + +E + + G+ P+I T+ L+D YG++G F+
Sbjct: 460 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 519
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +E M+ + Y+ +++A+ + G + + MR++ ++ S V L SL+
Sbjct: 520 EAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 579
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+G + + SVL+F+ + + D + + L+ A R++ F ++ + E M GC
Sbjct: 580 NAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCA 639
Query: 306 PDKVTYRTMVRA 317
PD+ R M+R+
Sbjct: 640 PDRKA-RAMLRS 650
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ E + M ++G N ++T L+ YGRSG F +A +E MK +
Sbjct: 476 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD-GLK 534
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+LI+A+G + AE
Sbjct: 535 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 594
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M PDV T ++A Q + + YE+ ++G P
Sbjct: 595 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 640
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 6/345 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVN 64
+ E + L M + GC N S++ +L + + +A L + M K C P+V
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ +I K K +L +M+ QG++P+ VTYN +IDA +A+ + EL L +M
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ +PD T NC + + G++ K + K +S G+ P+I N L S K G
Sbjct: 327 TTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS 386
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + + M + IV+Y ++ + G M LF M+S I C L
Sbjct: 387 KEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNIL 446
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AY G + + + + D V ++ ++ A+ R+ + M RG
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGI 506
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+P+ Y ++++ + +G AKE LV +M + RPD
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKAKE---LVSEMINK--GIPRPDI 546
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 166/365 (45%), Gaps = 39/365 (10%)
Query: 9 EKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
++A +LFQ M EG C N ++ ++ + + G KA SL M +PDV TY
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ-GVKPDVVTY 303
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFAEME- 118
+++I + KA A DK + +L M+T G +P+TVTYN +I Y GR AKMF +M+
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS 363
Query: 119 --------------LTLVK-------------MLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
+L K M ++ +PD+ + L + + G
Sbjct: 364 RGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFAD 423
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
M + +S GI FNIL+ +Y K G + + MQ+ S +VTY+ VI
Sbjct: 424 MIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG-HAGKPEKLGSVLRFIDNSDIM 270
AF R G L F M + I+P+ S+++ + H G + V I+
Sbjct: 484 AFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR 543
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D VFFN ++++ + + + +++ G +PD +T+ +++ Y G + A +
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603
Query: 331 QDLVE 335
D +E
Sbjct: 604 LDAME 608
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 155/415 (37%), Gaps = 88/415 (21%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRS-----------GLFDKAFSLLEHMKNTP 57
+ AH +F + + +S L+A R+ L F+ + + P
Sbjct: 91 DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150
Query: 58 DCQP-DVNTYSILIKSCLKAFAFD------------------------------------ 80
P V+TYSIL+ C +A D
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED---CEPDVWTMN 137
V LL MS G PN +Y+ ++ M ++ L L +M++++ C P+V N
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSM-SQRALDLFQMMAKEGGACSPNVVAYN 269
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ F G+ + + G++P + T+N+++D+ KA +K V+ M
Sbjct: 270 TVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN 329
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI----------------------- 234
VTYN +I + G LK+ +FR M+S +
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEA 389
Query: 235 ------------KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
KP V+ C+L+ Y G + + + ++ I D FN L+ A
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
Y + + + MQQ+G PD VTY T++ A+S G A E F +V +
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 2/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF +M G A+ + F L+ AY + G+ D A + M+ PDV TYS +I +
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ-GVSPDVVTYSTVISAF 485
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPD 132
+ + M +GI+PNT Y+++I + + + + +M+++ PD
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + G++ ++ G +P + TF L+D Y G +K +++
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ IVTY+ ++D + + G + LFR M+ + +KP+ VT ++ AG
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S + + ++ R C E + + + K
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725
Query: 313 TMVRAYSTNGMKNHAKEF 330
TM+ A K AKE
Sbjct: 726 TMINAMYKVQRKEEAKEL 743
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E F MV G NT + +++ + G KA L+ M N +PD+ ++ +I
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVI 553
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + ++ G RP+ +T+ +LID Y + L M E
Sbjct: 554 NSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVE 613
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T + L + +G+I+ + + Q G++P+ T+ I+L +AG
Sbjct: 614 TDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + T+ Y I++ R + LF+ + + +K S L +++ A
Sbjct: 674 FHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYK 733
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ E+ + I S ++ + + ++ + + + M++ G P
Sbjct: 734 VQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRL 793
Query: 311 YRTMVR 316
++R
Sbjct: 794 LNRIIR 799
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 1/204 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF+ M +G NT ++ +L+ R+G A M + V+ Y I++
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES-GTTVTVSIYGIILGGL 696
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D+ L + T ++ + NT+I+A + + E + + + P+
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + G ++ + + +GI P N ++ + G K +
Sbjct: 757 STYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSK 816
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAG 217
+ T ++++ F R G
Sbjct: 817 VDGKRILLEASTTSLMLSLFSRKG 840
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 164/346 (47%), Gaps = 7/346 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G Q E A L + M D + S+ + + A GR G +++ LL M + PD
Sbjct: 191 GSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSV-GLTPD 249
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I C K + + ++L++MS +G+ P T++YN I A GR+ + E L
Sbjct: 250 AITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLR 309
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S+ PDV + + ++A G GQ +T ++ G+ P+ FN + + GK G
Sbjct: 310 QMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGG 369
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+EK ++ + + ++N I A ++G K+ L + M ++R+KP ++
Sbjct: 370 QWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYN 429
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S + A G G+ E + R + + + + N + A G + E +L M +
Sbjct: 430 SAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQ 489
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G P+ +TY + ++ T G ++ DL+ KM E LAM PD
Sbjct: 490 GLTPNVITYNSAIK---TCGKGGQWEKALDLLAKMKE--LAMT-PD 529
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q EKA EL + + G + SF + ++A +SG + +A LL+ M +PD
Sbjct: 366 GKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP-AKRLKPD 424
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+Y+ I++C K ++ L M T+G+ PN ++ N I A G + E L
Sbjct: 425 AISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR 484
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ P+V T N ++ G GQ + K + + P T+N + + K G
Sbjct: 485 QMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRG 544
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++ A++ M + +++Y IDA+G+ G ++ L R M ++ + P+ +T
Sbjct: 545 RWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYN 604
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+++A G G+ EK +L+ + + + D + +N + A G+ + E +L M
Sbjct: 605 SVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAE 664
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G PD ++Y + +RA + G
Sbjct: 665 GLTPDVISYTSAIRACNAEG 684
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q ++A + M +G T S+ + A GRSG + +A +L M++ PD
Sbjct: 261 GKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQ-GVTPD 319
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +Y IK+C ++ LL +M+ +G+ PNT+ +N+ I A G+ + + L
Sbjct: 320 VISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLR 379
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + PD + N + A SG+ + ++ + ++P ++N +++ GK G
Sbjct: 380 EVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGG 439
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+E + M + +++ NI I A G G ++ L R M ++ + P+ +T
Sbjct: 440 QWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYN 499
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S ++ G G+ EK +L + + D++ +N + A + + E +L M +
Sbjct: 500 SAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQ 559
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD ++Y + AY NG A E
Sbjct: 560 GLTPDVISYTAAIDAYGKNGQWERAVEL 587
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 1/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q E A EL + M +G N S + A G G + + LL M P+
Sbjct: 436 GKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMP-AQGLTPN 494
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ IK+C K ++K LL+ M + P+++TYN+ I A + + E L
Sbjct: 495 VITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLR 554
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + PDV + + A+G +GQ + + + + G+ P++ T+N ++ + G+ G
Sbjct: 555 EMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGG 614
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+EK +++ +++ + +++YN+ I A G+ G ++ L R M +E + P ++
Sbjct: 615 EWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYT 674
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S +RA G+ EK +L + + ++ ++A G+ E ++ M QR
Sbjct: 675 SAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQR 734
Query: 303 GCKPDKVTYRTMVRA 317
G ++ +V A
Sbjct: 735 GLSHRNISNSLIVEA 749
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 166/347 (47%), Gaps = 7/347 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + ++A E+ + M +G + S+ A + A G G ++ + LL+ M P+
Sbjct: 296 GRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGR-GVAPN 354
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++ I +C K ++K LL +++ G+ P+ ++N+ I A ++ + E L
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +PD + N + A G GQ + + + + G+ P++ + NI + + G+ G
Sbjct: 415 EMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERG 474
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++ ++ M + ++TYN I G+ G ++ L M+ + P +T
Sbjct: 475 RWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYN 534
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S + A G+ ++ ++LR + + D + + +DAYG+ + +L M +
Sbjct: 535 SAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTK 594
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
G P+ +TY ++++A G A DL++++ ET +A PD
Sbjct: 595 GLTPNVITYNSVIKACGRGGEWEKA---LDLLKELKETAVA---PDL 635
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
EG S+T ++ GR G ++KA LL + P+V Y+ I++C ++
Sbjct: 138 EGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWE 197
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+LL +M+ + + P+ ++YN+ I A GR + + L +M S PD T N +
Sbjct: 198 IAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVI 257
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
G GQ + + G+ P ++N+ + + G++G +++ V+ M+ +
Sbjct: 258 TGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVT 317
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+++Y+ I A G G + L M + P+ + S + A G G+ EK +
Sbjct: 318 PDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVEL 377
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
LR + + D FN + A + + E +L+ M + KPD ++Y + + A
Sbjct: 378 LREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGK 437
Query: 321 NGMKNHAKEFQ 331
G A E +
Sbjct: 438 GGQWEMALELR 448
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 1/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A EL + M + + S+ + + A G+ G ++ A L M T P+V + +I
Sbjct: 407 KEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMP-TKGLTPNVISSNI 465
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I++C + + + LL M QG+ PN +TYN+ I G+ + + L KM
Sbjct: 466 AIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELA 525
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T N + A G+ + G+ P + ++ +D+YGK G +E+
Sbjct: 526 MTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAV 585
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + ++TYN VI A GR G+ ++ L + ++ + P ++ + A
Sbjct: 586 ELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISAC 645
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G+ E+ +LR + + D + + + A + + G+L +M G P
Sbjct: 646 GKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTA 705
Query: 309 VTYRTMVRAYSTNGMKNHA 327
+Y + A G + A
Sbjct: 706 TSYSLAIEACGKGGRREEA 724
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
EL + M +G N ++ + + G+ G ++KA LL MK PD TY+ I +
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKEL-AMTPDSITYNSAIAA 539
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
C K + + ALL +M QG+ P+ ++Y IDAYG+ + L +M ++ P+
Sbjct: 540 CSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T N ++A G G+ + ++ + + P + ++N+ + + GK G +E+ ++
Sbjct: 600 VITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLR 659
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + +++Y I A G+ ++ L LM + + P+ + + A G G
Sbjct: 660 EMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGG 719
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ E+ ++R + + + + +V+A G
Sbjct: 720 RREEAVCLVREMAQRGLSHRNISNSLIVEALG 751
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 3/248 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q EKA +L M + ++ ++ + ++A + G + +A +LL M PD
Sbjct: 506 GKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQ-GLTPD 564
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +Y+ I + K +++ LL M T+G+ PN +TYN++I A GR + E L L+
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEW-EKALDLL 623
Query: 123 KMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K L E PD+ + N + A G G+ + + + G+ P + ++ + +
Sbjct: 624 KELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAE 683
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +EK ++ M + S T +Y++ I+A G+ G ++ L R M + ++
Sbjct: 684 GEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISN 743
Query: 242 CSLVRAYG 249
+V A G
Sbjct: 744 SLIVEALG 751
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MSAVMEYM 194
+ LR +G+ ++ + G+ +++ + + G+ G +EK + + E
Sbjct: 113 LQAALREAATTGKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIP 171
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ S + YN I+A G + L R M + P ++ S ++A G G+
Sbjct: 172 EQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW 231
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E++ +LR + + + D + +N ++ G+ + E VL M +G P+ ++Y
Sbjct: 232 ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMA 291
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDET 340
+RA +G A E +E T
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVT 317
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 165/327 (50%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ + AH LF M + + +++ L++ +G++G+FD + L+ M+ D+
Sbjct: 119 RAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQD-RVSGDL 177
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ K + K ++ + GI P+ V YN++I+ +G+AK+F E +L + +
Sbjct: 178 VLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKE 237
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD + + L + + + + + A + T N+++D YG+
Sbjct: 238 MREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDM 297
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K +V+YN ++ +G + +LFRLM+ + I+ + VT +
Sbjct: 298 AKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNT 357
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + + EK ++++ + N I + + ++ ++ +G+ + + ++ G
Sbjct: 358 MIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 417
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY +G+ HAK
Sbjct: 418 VEIDQVLYQTMIVAYERSGLVAHAKRL 444
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 159/344 (46%), Gaps = 11/344 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L + M + G +T S++ LLS Y + F +A S+ M N C
Sbjct: 221 VFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEM-NEAKCP 279
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +++I + + L M GI PN V+YNTL+ YG ++F E
Sbjct: 280 LDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHL 339
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N ++ +G S + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 340 FRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGK 399
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ R+G + + L ++ P +
Sbjct: 400 AGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK----HPDSIP 455
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ ++ AG+ E+ V R ++ + D F C+VD + R + A + V E M+
Sbjct: 456 RETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMR 515
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV--EKMDETCL 342
G PD ++ AY K H E D + E +E C+
Sbjct: 516 GAGYFPDSNVIALVLNAYG----KLHEFEKADALYKEMQEEECV 555
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 153/341 (44%), Gaps = 36/341 (10%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S ++S R + ++ +LL+ + + P V Y++++++ L+A +D L +
Sbjct: 73 SIRFMVSVISRESDWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDE 132
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE 130
M + + P+ TY+TLI +G+A MF +ME L+++ + C+
Sbjct: 133 MRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCD 192
Query: 131 -----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
PD+ N + FG + + ++ + G+ P +++
Sbjct: 193 YSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYST 252
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LL Y + F + +V M + + T N++ID +G+ K+ + LF MR
Sbjct: 253 LLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMG 312
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
I+P+ V+ +L+R YG + + R + DI + V +N ++ YG+ +
Sbjct: 313 IEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKAT 372
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 373 NLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL 413
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 7/296 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A LF +M G + N S+ LL YG + LF +A L M+ D + +
Sbjct: 293 GQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKK-DIEQN 351
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +IK K+ +K L+ +M +GI PN +TY+T+I +G+A +
Sbjct: 352 VVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQ 411
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ SG + ++ + + P IL +AG
Sbjct: 412 KLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKIL----ARAG 467
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + ++D F R + +F MR P +
Sbjct: 468 RIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIA 527
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSD-IMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ AYG + EK ++ + + + + D V F L YG K F ++ + E
Sbjct: 528 LVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQML-SLYGARKDFMMIEALFE 582
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ YN ++ RAK + +M + PD +T + + FG +G D
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
++ + + + ++ L++ K + K ++ +++ +V YN +I+ FG+
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A ++ + L + MR + P V+ +L+ Y K + SV ++ + LD
Sbjct: 225 AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTT 284
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
N ++D YG+L E + M++ G +P+ V+Y T++R Y + A L++
Sbjct: 285 CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQ 344
Query: 336 KMD 338
K D
Sbjct: 345 KKD 347
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 163/327 (49%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ AH LF M + +++ L++++G+ G+FD A S L+ M+ D+
Sbjct: 169 RAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDL 227
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ + + K ++ S + GI P+ V YN++I+ YG+AK+F E + + +
Sbjct: 228 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKE 287
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M P+ + + L + + + + + + + T NI++D YG+
Sbjct: 288 MNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDM 347
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + ++K +V+YN ++ +G A + +LFRLM+ + I+ + VT +
Sbjct: 348 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 407
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + EK ++++ + + I + + ++ ++ +G+ + + ++ G
Sbjct: 408 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 467
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY G+ HAK
Sbjct: 468 VEIDQVLYQTMIVAYERVGLMGHAKRL 494
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 5/316 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K ++A L + M + G NT S++ LLS Y + F +A S+ MK +C D
Sbjct: 273 GKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV-NCPLD 331
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T +I+I + + L + I PN V+YNT++ YG A++F E
Sbjct: 332 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 391
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M +D E +V T N ++ +G + + + ++ QS GI+P+ T++ ++ +GKAG
Sbjct: 392 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 451
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + ++ V Y +I A+ R G M + RL+ ++ P +
Sbjct: 452 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHAKRLLHELKL-PDNIPRE 507
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + AG E+ V R S + D F C+++ Y R + + + V E M+
Sbjct: 508 TAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 567
Query: 303 GCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 568 GYFPDSNAIAMVLNAY 583
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 163/370 (44%), Gaps = 40/370 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q + ELF + S ++S R + ++ +LL+ +
Sbjct: 97 LLASIHQTQNEKELFSLL--STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYT 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V Y++++++ L+A F L +M + + P+ TY+TLI ++G+ MF + L+
Sbjct: 155 PSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF-DSALS 213
Query: 121 LVKMLSED-------------------CE-----------------PDVWTMNCTLRAFG 144
++ + +D C+ PD+ N + +G
Sbjct: 214 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 273
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ ++ AG+ P+ +++ LL Y + F + +V M++ + +
Sbjct: 274 KAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLT 333
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
T NI+ID +G+ +K+ + LF +R I+P+ V+ +++R YG A + + R +
Sbjct: 334 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 393
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-M 323
DI + V +N ++ YG+ + +++ MQ RG +P+ +TY T++ + G +
Sbjct: 394 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 453
Query: 324 KNHAKEFQDL 333
A FQ L
Sbjct: 454 DRAATLFQKL 463
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 141/349 (40%), Gaps = 30/349 (8%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLS--AYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KQPEK T SF AL Y RS D + E + + Q +
Sbjct: 63 KQPEKN--------------TTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEK 108
Query: 64 NTYSILIKSCLKAFAFDKVQALLS------------DMSTQGIR--PNTVTYNTLIDAYG 109
+S+L + + + +LLS D + + P+ YN ++
Sbjct: 109 ELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVL 168
Query: 110 RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
RAK F +M PD +T + + +FG G D+ +K + + +
Sbjct: 169 RAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 228
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
++ L++ + + K ++ +++ + +V YN +I+ +G+A K+ L + M
Sbjct: 229 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEM 288
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+ P+ V+ +L+ Y K + SV + + LD N ++D YG+L
Sbjct: 289 NEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMV 348
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
E + +++ +P+ V+Y T++R Y + A L+++ D
Sbjct: 349 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 397
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ M + + N ++ ++ YG++ +KA +L++ M+ + +P+ TYS +
Sbjct: 385 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ-SRGIEPNAITYSTI 443
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMEL--- 119
I KA D+ L + + G+ + V Y T+I AY R ++ E++L
Sbjct: 444 ISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 503
Query: 120 ----TLVKMLSE--DCEPDVWTMN---------------CTLRAFGNSGQIDTMEKCYEK 158
T + +L++ E W C + + + + + + +EK
Sbjct: 504 IPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 563
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
++AG P N ++L++YGK FEK V MQ+ + + ++ + D
Sbjct: 564 MRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKD 623
Query: 219 LKQMEYLFRLMRSE 232
+ +E LF + S+
Sbjct: 624 FEMVESLFERLESD 637
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 4/325 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G CK+ A E+++ MV EG + ++F+AL+ A G+ LLE M++ +P+
Sbjct: 208 GFCKE---ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM-GLRPN 263
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+I I+ + D+ ++ M G P+ VTY LIDA A+ +
Sbjct: 264 IYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFT 323
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM S +PD T L F + G +D +EK + + ++ G P + TF IL+++ KAG
Sbjct: 324 KMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ M+K + TYN +I RA L LF M S ++P+ T
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ +G +G P K + I + V N + + + E K + ++
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G PD VTY M++ YS G + A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEA 528
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 160/337 (47%), Gaps = 16/337 (4%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C +K +++ M +G + +FT L++A ++G ++AF LL+ M+ P+++
Sbjct: 347 CGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ-GVLPNLH 405
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ LI L+A D L S+M + G+ P TY LID +G++ + T KM
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM 465
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ P++ N +L + G++ + + + +S+G+ P T+N+++ Y K G
Sbjct: 466 KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQV 525
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ ++ M K ++ N +ID +AG +++ +F M + P+ VT L
Sbjct: 526 DEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNIL 585
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEMKGVLE 297
+ G G+ +K + ++ +T+ FN L+D + LK F +M +
Sbjct: 586 LAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM-- 643
Query: 298 VMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDL 333
C+PD +T+ T++ + N +KN F +
Sbjct: 644 -----NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 155/341 (45%), Gaps = 4/341 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + L + M G N ++T + GR G D+A+ +++ M + C PD
Sbjct: 240 GKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD-GCGPD 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY++LI + A D L + M + +P+ VTY TL+D + ++E
Sbjct: 299 VVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWT 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ PDV T + A +G+I+ + + G+ P+++T+N L+ +A
Sbjct: 359 EMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRAN 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + M+ T TY ++ID G++G + F M++ I P+ V
Sbjct: 419 RLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACN 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + + G+ + ++ + +S + D+V +N ++ Y ++ E +L M +
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
C+PD + +++ G +E + +M+E LA
Sbjct: 539 QCEPDVIVINSLIDTLYKAG---RVEEAWQMFCRMEEMNLA 576
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L K K+ A +F E G + + L+ + + A++L E MK + C
Sbjct: 763 VLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK-SAGC 821
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD TY+ LI + K+ +++ L +M T+G +PNT+TYN +I ++ +
Sbjct: 822 APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++S D P T + SG++D + ++ G +P+ +NIL++ YG
Sbjct: 882 LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K GH + + M K + +Y I++D AG + + F ++ + P V
Sbjct: 942 KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
++ G + + E+ S+ + N I+ D +N L+ G + E + E +
Sbjct: 1002 AYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
Q G KP+ TY ++R Y+ +G
Sbjct: 1062 QFIGLKPNVFTYNALIRGYTLSG 1084
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 147/330 (44%), Gaps = 1/330 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++A+ + + M D+GC + ++T L+ A + D A L MK++ +
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH-K 331
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY L+ DKV+ + ++M G P+ VT+ L++A +A E
Sbjct: 332 PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDL 391
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + P++ T N + + ++D + +S G++P+ T+ +L+D +GK
Sbjct: 392 LDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGK 451
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+GH K E M+ + IV N + + G L + + +F ++S + P VT
Sbjct: 452 SGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVT 511
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G+ ++ +L + D + N L+D + E + M+
Sbjct: 512 YNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRME 571
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ P VTY ++ G A +
Sbjct: 572 EMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + Y++LI L+ + L +M + G P+T TYN+LIDA+G++ E+
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ML+ C+P+ T N + S ++D Y S P+ TF L+D
Sbjct: 847 LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G + + + M Y YNI+++ +G+ G + F+ M E I+P
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ LV AG+ + + + + D V +N +++ GR + E + M
Sbjct: 967 SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
Q RG PD TY +++ GM A K +++L
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + +L+ M+ GC NT ++ ++S +S DKA L ++ + D P
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV-SGDFSPT 894
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T+ LI LK+ D + M G RPN+ YN L++ YG+
Sbjct: 895 PCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFK 954
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD+ + + +G++D +EK + AG+ P + +N++++ G++
Sbjct: 955 RMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQ 1014
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ ++ MQ + TYN +I G G +++ ++ ++ +KP+ T
Sbjct: 1015 RTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYN 1074
Query: 243 SLVRAYGHAGKPE 255
+L+R Y +G E
Sbjct: 1075 ALIRGYTLSGNSE 1087
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK P KA E F+ M G N + A L + G +A ++ +K++ PD
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS-GLAPD 508
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++++K K D+ LLS+MS P+ + N+LID +A E
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFC 568
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + P V T N L G GQI + +E G P+ TFN LLD K
Sbjct: 569 RMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKND 628
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + M + ++T+N +I F + +K +LF M+ + ++P VTLC
Sbjct: 629 EVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLC 687
Query: 243 SLVRAYGHAGKPE 255
+L+ +G+ E
Sbjct: 688 TLLPGVIKSGQIE 700
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AHE+F MV GC N+ + L++ YG+ G D A + M +P
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKE-GIRP 963
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ +Y+IL+ A D + G+ P+ V YN +I+ GR++ E
Sbjct: 964 DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PD++T N + G G I+ K YE+ Q G++P++ T+N L+ Y +
Sbjct: 1024 HEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLS 1083
Query: 182 GHFEKMSAVMEYM 194
G+ E + + M
Sbjct: 1084 GNSELAYGIYKKM 1096
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 155/369 (42%), Gaps = 45/369 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK Q +KA +LF++M GC NT +F LL ++ D A + M T +C+P
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKM-TTMNCRP 647
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----------DAYGRA 111
DV T++ +I +K L M + +RP+ VT TL+ DA+
Sbjct: 648 DVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRIT 706
Query: 112 K-MFAEMELTLVKMLSEDCEPDVWTMNCTLRA--FGN----------------------- 145
+ F ++ + + ED + T T +A FG
Sbjct: 707 EDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCK 766
Query: 146 SGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + KF + G++P++ +N+L+D + + + E + E M+ +
Sbjct: 767 HKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF 826
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +IDA G++G + ++ L+ M + KP+ +T ++ + + +K + +
Sbjct: 827 TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 265 DNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ D F L+D GRL EM + M GC+P+ Y +V Y
Sbjct: 887 VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEM---FDGMVHYGCRPNSAIYNILVNGYGKL 943
Query: 322 GMKNHAKEF 330
G + A EF
Sbjct: 944 GHVDTACEF 952
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 141/330 (42%), Gaps = 4/330 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F M + N ++ + + G +A S LE M+ + +Y+ LI
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVL-NAYSYNGLIHFL 204
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L++ + + M ++G++P+ T++ L+ A G+ + + L +M S P++
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNI 264
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+T +R G G+ID + ++ G P + T+ +L+D+ A + +
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ + VTY ++D F G L ++E ++ M ++ P VT LV A AG+
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ +L + ++ + +N L+ R + + M+ G +P TY
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
++ + +G H + + EKM +A
Sbjct: 445 LIDYHGKSG---HPGKALETFEKMKARGIA 471
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + A E F+ MV EG + +S+T L+ +G D A E +K PD
Sbjct: 941 GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQA-GLDPD 999
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ Y+++I ++ ++ +L +M +GI P+ TYN+LI G M E
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
++ +P+V+T N +R + SG + Y+K G P+ TF
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
AF FD +Q Q IR N TY + + + L KM + ++
Sbjct: 144 AFVFDLMQ-------RQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYS 196
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N + SG + Y + S G++PS+ TF+ L+ + GK + + + ++E M+
Sbjct: 197 YNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
I TY I I GR G + + + + M + P VT L+ A A K +
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLD 316
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + +S D V + L+D + +++ + M+ G PD VT+ +V
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376
Query: 316 RAYSTNGMKNHAKEFQDLVEK 336
A G N A + D + K
Sbjct: 377 NALCKAGRINEAFDLLDTMRK 397
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 80 DKVQALLSDMSTQGIRPNTV----TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
D + AL + G PN V T N +++ + +M M + +V T
Sbjct: 103 DPIHALFY-FKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDT 161
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
++ G + EK + AG + ++N L+ ++G ++ V M
Sbjct: 162 YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
++ T++ ++ A G+ ++K + L M S ++P+ T +R G GK +
Sbjct: 222 SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ +++ +D+ D V + L+DA + + + M+ KPDKVTY T++
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Query: 316 RAYSTNG 322
+S G
Sbjct: 342 DKFSDCG 348
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 163/323 (50%), Gaps = 21/323 (6%)
Query: 10 KAHELFQAM-----VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
KA++L QA+ + E N +++ +++ ++ L KA+ +L+ M++ PD+
Sbjct: 19 KANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLV 78
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGR-------AKMFAE 116
TYS +I K D+ +L +M T+ GI P+ VTY +++D R +M E
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY-EKFQSAGIQPSINTFNILL 175
M+L V EPD +T + + + N+ ++D K Y E S+ +P + T+ L+
Sbjct: 139 MKLKGV-------EPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D + K+G+ EK ++ M+ +VTY+ ++ +AGDL Q LFR M S+
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT +L+ A K + ++ + + DTV +N L+D Y RL E K +
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311
Query: 296 LEVMQQRGCKPDKVTYRTMVRAY 318
+ M + C PD++TY +VR +
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGF 334
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 39/331 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK EKA ++ M C N ++++LL ++G D+A L M + C
Sbjct: 193 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM-TSKGCV 251
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI A D + L+ +M+ P+TV+YN L+D Y R E +
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA-GIQPSINTFNILLDSYG 179
+M ++ C PD T C +R F N+ +++ E ++A GI P + T++I++ Y
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A F + + ++ M + + VTY+ +ID +AG + + + M ++R++PS
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T FN ++ A RL E +L M
Sbjct: 432 T-----------------------------------FNSVIGALCRLGDMDEAWKLLVAM 456
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G +P VTY T++ +S G A E
Sbjct: 457 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYEL 487
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 9/271 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E+A +LF+ M + C + ++T L+ + + ++A LLE+MK
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYSI++ +A F + + +M + + PN VTY++LID +A
Sbjct: 358 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEV 417
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M+++ EP V T N + A G +D K + G++P + T+ LL+ + +
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIV-------TYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
G E + E M+K + ++ +I +A ++ + + +RS
Sbjct: 478 TGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRE 537
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+P+ ++V AG+ E+ G ++ I
Sbjct: 538 CEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C+P V T + F + Q+ C+EK + + P+ T+N++++ KA K
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKA 60
Query: 188 SAVMEYMQK-YHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLV 245
V++ M+ + +VTY+ VI+ F + G++ + E L ++ + I P VT S+V
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGC 304
GK ++ ++R + + D F+ L+ + + E +K E++
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
KPD VTY ++ + +G A + ++E
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVME 211
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 2/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++ E A + + M N F+ +L++Y G + K F +L M+++ +PD
Sbjct: 387 GNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS-GVRPD 445
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y++LI + K D A M ++GI P+T+T+NTL+D + +A E
Sbjct: 446 RIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFE 505
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + P T N + +FG+ + D ++ +S G+ P+ T+ L+D YGK+G
Sbjct: 506 EMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSG 565
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F+ ++ M+ + YN +++A+ + G Q F MR + +KPS + L
Sbjct: 566 RFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALN 625
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ A+G + + VL+++ +D+ D V + L+ A ++ F ++ V E M
Sbjct: 626 SLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILS 685
Query: 303 GCKPDKVTYRTMVRA 317
GC PD+ R M+R+
Sbjct: 686 GCTPDRKA-RAMLRS 699
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 152/317 (47%), Gaps = 1/317 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C + E+A +F+ M D G T+++ ALL Y ++GL A ++ M+ + P
Sbjct: 316 LGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERS-GVLP 374
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYS+LI + A ++ + +L +M ++PN ++ ++ +Y + + L
Sbjct: 375 NEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVL 434
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M PD N + FG +D +++ S GI+P T+N L+D + KA
Sbjct: 435 REMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKA 494
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + E M + Y T+NI+I++FG ++ L MRS+ + P+ VT
Sbjct: 495 GKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTY 554
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ YG +G+ + L + + + + +N L++AY + + M+
Sbjct: 555 TTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRD 614
Query: 302 RGCKPDKVTYRTMVRAY 318
G KP + +++ A+
Sbjct: 615 DGLKPSLLALNSLINAF 631
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 154/326 (47%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K +KA E + G T + ++ G G ++A ++ E M++ QP
Sbjct: 281 FAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDN-GLQP 339
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ L++ +KA + ++S+M G+ PN TY+ LIDAYG A+ + + L
Sbjct: 340 RTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVL 399
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + + +P+ + + L ++ + G+ + + + +G++P +N+L+D++GK
Sbjct: 400 KEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKF 459
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ A + M +T+N ++D +AG + E LF M + P T
Sbjct: 460 NCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTF 519
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ ++G + + + ++L + + ++ + V + L+D YG+ F + L+ M+
Sbjct: 520 NIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKA 579
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y ++ AY+ G+ + A
Sbjct: 580 AGLKPSSTMYNALLNAYAQRGLSDQA 605
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 163/338 (48%), Gaps = 11/338 (3%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL-- 69
++++ + + + + Q + ++ + ++G DKA L ++ + +++
Sbjct: 256 QKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWG 315
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ +C + ++ +A+ +M G++P T YN L+ Y +A + + E + +M
Sbjct: 316 LGNCGRT---EEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGV 372
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T + + A+GN+ + ++ ++ +++ +QP+ F+ +L SY G ++K
Sbjct: 373 LPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQ 432
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V+ M+ + YN++ID FG+ L F M SE I+P +T +LV +
Sbjct: 433 VLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHC 492
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AGK ++ + + + FN +++++G + + ++K +L M+ +G P+ V
Sbjct: 493 KAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAV 552
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
TY T++ Y +G F D +E +D+ A +P
Sbjct: 553 TYTTLIDIYGKSG------RFDDAIECLDDMKAAGLKP 584
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 152/352 (43%), Gaps = 58/352 (16%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
++ L+ A G+S +AF L + TP TY+ LI +C + +K L+ M
Sbjct: 172 YSILIHALGQSEKLYEAFLLSQKQNLTP------LTYNALISACARNNDIEKALNLICRM 225
Query: 90 STQGIRPNTVTYNTLIDAY---GRA------KMFAEMELTLVKMLSEDCEPDV--W---- 134
G + V Y+ +I + RA K++ E++ + E DV W
Sbjct: 226 REDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREID-------RDKLEVDVQLWNDII 278
Query: 135 -----------------------------TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
T+ + GN G+ + E +E+ + G+Q
Sbjct: 279 VGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQ 338
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P +N LL Y KAG V+ M++ TY+++IDA+G A + +
Sbjct: 339 PRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIV 398
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ M + ++P+ ++ +Y G+ +K VLR +++S + D +F+N L+D +G+
Sbjct: 399 LKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGK 458
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
C + M G +PD +T+ T+V + G + A+E F++++EK
Sbjct: 459 FNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEK 510
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 15/286 (5%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YSILI + ++ +K+ Q + P +TYN LI A R E L L+ +
Sbjct: 172 YSILIHALGQS---EKLYEAFLLSQKQNLTP--LTYNALISACARNNDI-EKALNLICRM 225
Query: 126 SEDCEP-DVWTMNCTLRAF--GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
ED P D+ + +R+ N ++K Y + ++ + +N ++ + KAG
Sbjct: 226 REDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAG 285
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K + +Q S T VI G G ++ E +F MR ++P
Sbjct: 286 DLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYN 345
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+R Y AG V+ ++ S ++ + ++ L+DAYG + + + VL+ M+
Sbjct: 346 ALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEAS 405
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+P+ + ++ +Y G K FQ L E D RPD
Sbjct: 406 NVQPNAYVFSRILASYRDKG--EWQKTFQVLREMEDSGV----RPD 445
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + EG A+ + ++ A GR G D +LL+ M P + DV Y+
Sbjct: 120 EWALALLRWAGAEGA-ADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTT 178
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + +A +++ L +++ QG+ P VTYN ++D YGR + + + L +M +
Sbjct: 179 VLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAA 238
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 239 GVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEA 298
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M++ VTYN + + RAG ++ M S+ + P+ T +++ A
Sbjct: 299 LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTA 358
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
YG+ GK ++ ++ + S + + +N ++ G+ F M +L M + GC P+
Sbjct: 359 YGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPN 418
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ TM+ GM+++
Sbjct: 419 RVTWNTMLAVCGKRGMEDY 437
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M +GC + ++ L Y R+G +++A L+ M +
Sbjct: 288 VFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTM-TSKGLL 346
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + D+ AL M G PN TYN ++ G+ F M
Sbjct: 347 PNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G D + + E +S G++ S +T+N L+ +YG+
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGR 466
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + M ++ + TYN +++ R GD + + MR++ KP+ +
Sbjct: 467 CGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQS 526
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ Y G + ++ + + + V LV A + + ++ + ++
Sbjct: 527 YSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVK 586
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
RG PD V + +M+ Y+ NGM + E D +++
Sbjct: 587 ARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQ 622
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + E+A ELF + +G ++ +L YGR G + + +LL+ M+ +
Sbjct: 183 LSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR-AAGVE 241
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T S +I +C + D+ A D+ +G P VTYN L+ +G+A + E
Sbjct: 242 PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV 301
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M + C+PD T N + +G + KC + S G+ P+ T+N ++ +YG
Sbjct: 302 LKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGN 361
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ A+ + M+K + TYN ++ G+ M + M P+ VT
Sbjct: 362 IGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVT 421
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G + + VL + + + L +N L+ AYGR + M
Sbjct: 422 WNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT 481
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY ++ S G + A Q +V KM
Sbjct: 482 SAGFAPCLTTYNALLNVLSRQGDWSTA---QSIVSKM 515
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 158/336 (47%), Gaps = 1/336 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + + M G + + ++ L++AYGR G AF + M + P
Sbjct: 430 GKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEM-TSAGFAPC 488
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ + + Q+++S M T+G +PN +Y+ L+ Y + A ++
Sbjct: 489 LTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEK 548
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ P + + A ++ +EK +++ ++ G P + FN +L Y K G
Sbjct: 549 EVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNG 608
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K++ + + +++ S ++TYN ++D + + + + E + ++S ++KP V+
Sbjct: 609 MYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYN 668
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + G ++ +L + + V ++ LV Y L+ F+E + V+ M Q
Sbjct: 669 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQH 728
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
KP ++TYR +V +Y A+ F V + D
Sbjct: 729 NLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETD 764
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 164/335 (48%), Gaps = 15/335 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + M G N ++ +++ Y G F+ A + + MK+ + +PD TY+
Sbjct: 234 KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK-NLKPDCYTYNS 292
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEMELTLVKM 124
I K ++ +L + G+ PN VTYN LID K FA + +M
Sbjct: 293 FISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRD----EM 348
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ V+T N + A +I+ E ++ + G++P + T+NI ++ Y + G+
Sbjct: 349 MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNA 408
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+K ++ + M + + T+ TY +ID FG+ + + E F+ E + P + +L
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNAL 468
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G ++ +L+ +DN+ ++ D V FN L+ Y R + E K +L+ M++RG
Sbjct: 469 IDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI 528
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KPD ++Y T++ YS G + +D +E DE
Sbjct: 529 KPDHISYNTLISGYSKRG------DMKDALEVFDE 557
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 24/345 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E+A + +++ G N ++ AL+ G DKAF+ + M N
Sbjct: 297 LCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNR-GIVA 355
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY++LI + ++ + ++ +M +G+ P+ VTYN I+ Y R A+ L+L
Sbjct: 356 SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN-AKKALSL 414
Query: 122 V-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ ++ P V T + FG ++ E+ ++K G+ P I FN L+D +
Sbjct: 415 FDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCV 474
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ +++ M VT+N ++ + R +++ + L M+ IKP ++
Sbjct: 475 NGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHIS 534
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF------FNCLVDAYGRLKCFAEMKG 294
+L+ Y K G + ++ D ML F +N L+ Y ++ +
Sbjct: 535 YNTLISGYS------KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEE 588
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+L MQ +G PD TY ++ A TN DLVE D+
Sbjct: 589 LLREMQSKGITPDDSTYLYVIEAMKTN---------DDLVENDDK 624
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 53/341 (15%)
Query: 48 SLLEHMKNTPDCQPDVNT----YSILIKSCLKAFAFDKVQALL---------SDMSTQGI 94
+LL H+ P C D+NT IL + +F +Q +L +++S
Sbjct: 82 TLLSHLHRHPHCL-DLNTRCITLCILYRLPSPKPSFHILQPILHTTTPTVIFNELSLARN 140
Query: 95 RPN---TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
R N T+ ++ L+ AY + + E L M + P T N L +I
Sbjct: 141 RLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKM 200
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
YE+ I+ SI TFNI+++ + G ++K + +M+ Y +VTYN VI+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ G + +F+ M+ + +KP C T S + + E+ VL + S ++
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 272 DTVFFNCLVDA---YGRL-KCFA-------------------------------EMKGVL 296
+ V +N L+D G L K FA E + ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+ M+++G +PD VTY + Y G A F ++VEK
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK 421
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 10/335 (2%)
Query: 6 KQPEKAHELFQAMVD---EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
++ E+A EL MVD C + S+ +++ + G DKA+SL M PD
Sbjct: 169 RRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM----GVSPD 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I KA D+ + + M +G++PN VTYNT+ID +A+ E
Sbjct: 225 VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM+ + +P T N + + +D E +++ G++P T+N ++D KA
Sbjct: 285 KMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQ 344
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K V + M +TY I+ID +A + + E +F+ M + +KP+ T
Sbjct: 345 AIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYN 404
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y G+ E++ ++ + D+ D + L+D + E + + + M ++
Sbjct: 405 CLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK 464
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G KP Y M+ Y G K E DL+ M
Sbjct: 465 GIKPSVTIYGIMLHGY---GKKGALSEMHDLLNLM 496
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 157/326 (48%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A ++FQ MV++G N ++ ++ ++ D A + + M + +P
Sbjct: 235 LCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK-GVKP 293
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+ +I KA A D+ + + M +G++P+ VTYNT+ID +A+ + E
Sbjct: 294 SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVF 353
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + +PD T + + +D E +++ G++P+ T+N L+ Y
Sbjct: 354 QQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLST 413
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +E++ ++ M + + TY +++D + G + LF M + IKPS
Sbjct: 414 GQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIY 473
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ YG G ++ +L + + I + FN ++ AY + E+ + M+Q
Sbjct: 474 GIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQ 533
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G P+ VTY T++ A G + A
Sbjct: 534 QGLSPNVVTYGTLIDALCKLGRVDDA 559
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 169/349 (48%), Gaps = 11/349 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +FQ M+D G + ++ ++ ++ DKA + + M + +P
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK-GVKP 363
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+I+I KA + D+ + + M +G++PN TYN LI Y + E+ +
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + D EPDV+T L +G+ + ++ GI+PS+ + I+L YGK
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +M ++ M S +N VI A+ + + ++ ++F M+ + + P+ VT
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTY 543
Query: 242 CSLVRAYGHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ A G+ + +VL+F + N + + V FN LV + + +++ + M
Sbjct: 544 GTLIDALCKLGRVDD--AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+G +PD V + T++ G E + L++ M C+ +K PD
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEG---RVMEARRLIDSM--VCMGLK-PD 644
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 141/312 (45%), Gaps = 7/312 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+++ ++ + R G + F+ + T D+ +L C + + LL
Sbjct: 86 TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145
Query: 89 MSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M G R V+YNTL+ RA+ E+ +V C PDV + N + F N
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
GQ+D K Y F G+ P + T+N ++D KA ++ V + M + VT
Sbjct: 206 EGQVD---KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +ID +A ++ E +F+ M + +KPS VT +++ A ++ V + +
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + D V +N ++D + + + +GV + M +G KPD +TY ++ +
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382
Query: 326 HAKE-FQDLVEK 336
A+ FQ +++K
Sbjct: 383 RAEGVFQQMIDK 394
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 140/328 (42%), Gaps = 1/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + H+L MV G N + F ++ AY + + D+ + MK P+
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ-GLSPN 539
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY LI + K D + M +G+ PN V +N+L+ + ++E +
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML++ PD+ N L G++ + + G++P + ++N L+D + A
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ M IV+YN ++ + +AG + LFR M + + P T
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ +G+ + + + S + ++ ++D + + CF E + + +
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D +T+ M+ G K A +
Sbjct: 780 DLQLDIITFNIMIDGLFKGGRKEDAMDL 807
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 145/331 (43%), Gaps = 4/331 (1%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M++EG N F +L+ ++K L M N +PD+ ++ ++ +
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ-GIRPDIVFFNTVLCNLC 621
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + + L+ M G++P+ ++YNTLID + A E L M+S +P++
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
+ N L + +G+ID + + G+ P + T+N +L+ ++G F + + M
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
K W+I TY+I++D F + + +F+ + S ++ +T ++ G+
Sbjct: 742 IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E + I + ++ V + + + E+ + VM++ G P+ +
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNAL 861
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
+R G A + + K+DE +++
Sbjct: 862 IRKLLDRGEIPRAGAY---LSKLDEKNFSLE 889
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
E H L + M + GC S+ LL ++A LL M + D C PDV +Y
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I+I DK +L F EM ++
Sbjct: 197 NIVINGFFNEGQVDKAYSL----------------------------FLEMGVS------ 222
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PDV T N + + ++D E +++ G++P+ T+N ++D KA +
Sbjct: 223 ----PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDM 278
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
V + M + VTYN +ID +A + + E +F+ M +KP VT +++
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIID 338
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A +K V + + + + D + + ++D + + +GV + M +G KP
Sbjct: 339 GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ TY ++ Y + G +++++V+++ E PD
Sbjct: 399 NNGTYNCLIHGYLSTG------QWEEVVQRIKEMSAHDLEPD 434
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 36/364 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +FQ M+D+G N ++ L+ Y +G +++ ++ M + D +P
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAHDLEP 433
Query: 62 DVNTYSIL------------------------IKSCLKAF-----------AFDKVQALL 86
DV TY +L IK + + A ++ LL
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M GI PN +NT+I AY + M E+ +KM + P+V T + A
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++D + + + G+ P+ FN L+ +EK+ + M IV +
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N V+ + G + + L M +KP ++ +L+ + A + ++ +L + +
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + + V +N L+ Y + + M ++G P TY T++ +G +
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 327 AKEF 330
A+E
Sbjct: 734 AREL 737
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 171/408 (41%), Gaps = 84/408 (20%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQP 61
+ ++ ++A LF M C + +++ AL++ +GR+G + A + + M P P
Sbjct: 98 ARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAP 157
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY------------- 108
++Y+ LI +C + + K + M+ G+ P+ +TYN ++ A+
Sbjct: 158 SRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYY 217
Query: 109 -------------------------GR----AKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
GR +F EM KM CEPDV T N
Sbjct: 218 DHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMR----KM--NGCEPDVVTFNAL 271
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY--------------------- 178
L + GQI ++ ++ G+ P+I TFN LL +Y
Sbjct: 272 LHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKF 331
Query: 179 --------------GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
GKAG+ EK V + M++ +VT+N ++DA+ AG ++
Sbjct: 332 EPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARE 391
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
L M RI+P+ VT+CSL A A PEK+ V I L+ FN + AY
Sbjct: 392 LLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYI 451
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
F E K +LEVM+++ +P+ VT+ ++ A + G A+ D
Sbjct: 452 EAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYD 499
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 12/317 (3%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q KA E F M+ EG +F LL AY G++ +A ++ + +PDV
Sbjct: 278 CGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKA-KFEPDVV 336
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+YS L+ + KA +K Q + M + +PN VT+N L+DAY A + L M
Sbjct: 337 SYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDM 396
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP---SINTFNILLDSYGKA 181
EP+V T+ C+L F + EK + F A ++ ++ FN + +Y +A
Sbjct: 397 AEARIEPNVVTI-CSL--FAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEA 453
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F++ A++E M++ + VT+ ++I+A G GD ++ L+ M I P V
Sbjct: 454 GQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGI-PLTVEP 512
Query: 242 CS-LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
CS L+ A+ G + ++ + + + V + L+ AY + + + + E M
Sbjct: 513 CSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAY---RMYDDAQLACEEMV 569
Query: 301 QRGCKPDKVTYRTMVRA 317
G PD + + T+ A
Sbjct: 570 AAGITPDSIAFGTLFVA 586
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 39/349 (11%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++F AL+S R+G + + + MKN + + Y+ +I + D+ + L
Sbjct: 50 NRKNFPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGL 109
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEM--------------------- 117
+M +P+ TYN L++ +GRA ++F +M
Sbjct: 110 FYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINAC 169
Query: 118 --------ELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
L + K ++++ PD+ T N L AF + GQ Y+ S +
Sbjct: 170 GSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDR 229
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
+ NI+L+ K G FE + + M+K + +VT+N ++ + G + + + F
Sbjct: 230 YSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFD 289
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
+M E + P+ VT +L+ AY G + V+ + + D V ++ L++A+G+
Sbjct: 290 MMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAG 349
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+ + V ++M+QR KP+ VT+ ++ AY++ G A+E D+ E
Sbjct: 350 YPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAE 398
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 4/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK PEKA E+F M N +F L+ AY +G +++A LL M +P
Sbjct: 345 FGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEA-RIEP 403
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T L +C +A +KV+ + + + I N +N I AY A F E + L
Sbjct: 404 NVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALL 463
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M ++ P+ T + A G+ G Y+K GI ++ + L++++ K
Sbjct: 464 EVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKH 523
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + + M+K +VTY ++ A+ R D Q+ M + I P +
Sbjct: 524 GMYNEARTIFDDMRKAGCKANVVTYTSLMIAY-RMYDDAQLA--CEEMVAAGITPDSIAF 580
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L A A + EK+ + + I+ D V + + A RLK + + E M++
Sbjct: 581 GTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKK 640
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
R + ++ A +G
Sbjct: 641 RRLRLTNTMVINLLSAVGRSG 661
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 5/318 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ + PEK ++F N +F A ++AY +G FD+A +LLE M+ + +P+
Sbjct: 416 ARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQ-NLRPN 474
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T+ +LI + + + + L M GI + LI+A+ + M+ E
Sbjct: 475 GVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFD 534
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C+ +V T + A+ D + E+ +AGI P F L + KA
Sbjct: 535 DMRKAGCKANVVTYTSLMIAYR---MYDDAQLACEEMVAAGITPDSIAFGTLFVALNKAN 591
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK+ + + + + V Y + A R D + +L+ M+ R++ + +
Sbjct: 592 RSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKKRRLRLTNTMVI 651
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV-FFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ A G +GK ++L V + + T+ +N L+D+Y R + + VL +++
Sbjct: 652 NLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLKWRKCLEVLGCIKK 711
Query: 302 RGCKPDKVTYRTMVRAYS 319
+P+ TY ++ S
Sbjct: 712 DILEPNWKTYEPILSCLS 729
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 61/144 (42%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K E A L++ M LLSA GRSG D+ + ++ P +
Sbjct: 624 RLKDWETALFLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTL 683
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ILI S + + K +L + + PN TY ++ + +++ +
Sbjct: 684 QMYNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGE 743
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSG 147
+L++ EPD + ++ A+ + G
Sbjct: 744 VLAQGMEPDYNILKISVTAYTSLG 767
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 4/196 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + EK ++ ++ G + ++T L A R ++ A L E MK
Sbjct: 587 LNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKKRR--LR 644
Query: 62 DVNTYSI-LIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMEL 119
NT I L+ + ++ D++ + ++ Q G P YN LID+Y R + +
Sbjct: 645 LTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLKWRKCLE 704
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + + EP+ T L +T + Y + + G++P N I + +Y
Sbjct: 705 VLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPDYNILKISVTAYT 764
Query: 180 KAGHFEKMSAVMEYMQ 195
G E+ S +Q
Sbjct: 765 SLGMEEEASLTEARLQ 780
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++A + + M + G + + +LSAY R + K S E MK T + +PD
Sbjct: 243 GSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGT-NIRPD 301
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K K + + M + P+ VT+ T+I Y +
Sbjct: 302 TTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTA 361
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E +P++ + N + A+ + G + + + G P + ++ LL++YGK
Sbjct: 362 FNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGK 421
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G EK V E M++ H +V+YN +IDA+G G L + + M ++P+ V+
Sbjct: 422 SGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVS 481
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ K+ SVL + I L+T +N + +Y + + + + M+
Sbjct: 482 ICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR 541
Query: 301 QRGCKPDKVTYRTMV 315
+ KPD VTY ++
Sbjct: 542 TKKVKPDPVTYNVLI 556
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A ++++ M P +TY+
Sbjct: 179 DQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA-IPPSRSTYNN 237
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +C + + + + M+ G+ P+ VT+N ++ AY R ++++ M +
Sbjct: 238 LINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTN 297
Query: 129 CEPDVWTMN----CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T+N C ++ N ID EK + P + TF ++ Y G
Sbjct: 298 IRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEK--RSECYPDVVTFTTIIHLYSVCGQI 355
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E M IV+YN +I A+ G K+ +F ++ P V+ SL
Sbjct: 356 ENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSL 415
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AYG +GKPEK V + + + V +N L+DAYG E +L M++ G
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 305 KPDKVTYRTMVRAYSTNGMK 324
+P+ V+ T++ A G K
Sbjct: 476 QPNIVSICTLLAACGRCGQK 495
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 146/305 (47%), Gaps = 15/305 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +PEKA ++F+ M C N S+ AL+ AYG GL +A +L M+ QP+
Sbjct: 420 GKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN-GVQPN 478
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ + L+ +C + K++++LS +GI+ NT YN+ I +Y + +
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 123 KMLSEDCEPDVWTMN------CTLRAFGNS-GQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M ++ +PD T N C + +G + G +D M I S ++ ++
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM-------MDLKIPLSKEVYSSVI 591
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+Y K G + ++ M+ ++TY +I A+ A + ++ LF M ++ ++
Sbjct: 592 CAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQ 651
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P + SL+RA+ G+P K+ + F+ I + F +V A L+ + E+ G+
Sbjct: 652 PDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGL 711
Query: 296 LEVMQ 300
+++M+
Sbjct: 712 IKLME 716
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 150/350 (42%), Gaps = 36/350 (10%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E F M+ EG N S+ AL+ AY G+ +AFS+ +K PDV
Sbjct: 352 CGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKN-GFHPDVV 410
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + K+ +K + M +PN V+YN LIDAYG + E L +M
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM 470
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P++ ++ L A G GQ ++ + GI+ + +N + SY G +
Sbjct: 471 ERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEY 530
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVID--------------------------------- 211
+K ++ M+ VTYN++I
Sbjct: 531 DKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSV 590
Query: 212 --AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
A+ + G + + E +F M+ +P +T +++ AY A EK ++ ++ D+
Sbjct: 591 ICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDV 650
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
D++ + L+ A+ + A++ + E M+++ + ++ MV A S
Sbjct: 651 QPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS 700
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 37/346 (10%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + + MKN + + Y+++I+ + D+ + L
Sbjct: 127 KNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFF 186
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ TYN LI+A+GRA + + ML P T N + A G+SG
Sbjct: 187 EMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 246
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+K G+ P + T NI+L +Y + + K+ + E M+ + T N
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLN 306
Query: 208 IV-------------IDAFGR------------------------AGDLKQMEYLFRLMR 230
IV ID F G ++ + F M
Sbjct: 307 IVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTML 366
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+E +KP+ V+ +L+ AY G ++ SV I + D V + L++AYG+
Sbjct: 367 AEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ V E+M++ CKP+ V+Y ++ AY + G+ A E +E+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMER 472
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 7/338 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C Q K + A G NT ++ + + +Y G +DKA SL M+ T +PD
Sbjct: 490 GRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR-TKKVKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++LI C K + + L +M I + Y+++I AY + E E
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM C PDV T + A+ + + + + ++ +QP + L+ ++ K G
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K+ + E+M++ + ++ ++ A + +++ L +LM S L
Sbjct: 669 QPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVM 299
L+ G +GK E + + I S ++ ++ L+ A G + + E VL+ M
Sbjct: 729 QLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIE---VLQWM 785
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ G +P YR++ +A Q+ +E +
Sbjct: 786 EEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERIESL 823
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 5/197 (2%)
Query: 148 QIDTMEKCYEKFQSAGIQPSI----NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
QI ++E + F+ Q + + +N+++ + + ++ + MQK+
Sbjct: 138 QIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDA 197
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
TYN +I+A GRAG + + M I PS T +L+ A G +G ++ +V +
Sbjct: 198 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 257
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + D V N ++ AY R ++++ E+M+ +PD T ++ G
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 324 KNHAKE-FQDLVEKMDE 339
A + F + EK E
Sbjct: 318 NGKAIDIFNSMKEKRSE 334
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++A + + M + G + + +LSAY R + K S E MK T + +PD
Sbjct: 243 GSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGT-NIRPD 301
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K K + + M + P+ VT+ T+I Y +
Sbjct: 302 TTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTA 361
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E +P++ + N + A+ + G + + + G P + ++ LL++YGK
Sbjct: 362 FNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGK 421
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G EK V E M++ H +V+YN +IDA+G G L + + M ++P+ V+
Sbjct: 422 SGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVS 481
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ K+ SVL + I L+T +N + +Y + + + + M+
Sbjct: 482 ICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR 541
Query: 301 QRGCKPDKVTYRTMV 315
+ KPD VTY ++
Sbjct: 542 TKKVKPDPVTYNVLI 556
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A ++++ M P +TY+
Sbjct: 179 DQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA-IPPSRSTYNN 237
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +C + + + + M+ G+ P+ VT+N ++ AY R ++++ M +
Sbjct: 238 LINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTN 297
Query: 129 CEPDVWTMN----CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T+N C ++ N ID EK + P + TF ++ Y G
Sbjct: 298 IRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEK--RSECYPDVVTFTTIIHLYSVCGQI 355
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E M IV+YN +I A+ G K+ +F ++ P V+ SL
Sbjct: 356 ENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSL 415
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AYG +GKPEK V + + + V +N L+DAYG E +L M++ G
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 305 KPDKVTYRTMVRAYSTNGMK 324
+P+ V+ T++ A G K
Sbjct: 476 QPNIVSICTLLAACGRCGQK 495
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 146/305 (47%), Gaps = 15/305 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +PEKA ++F+ M C N S+ AL+ AYG GL +A +L M+ QP+
Sbjct: 420 GKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN-GVQPN 478
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ + L+ +C + K++++LS +GI+ NT YN+ I +Y + +
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 123 KMLSEDCEPDVWTMN------CTLRAFGNS-GQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M ++ +PD T N C + +G + G +D M I S ++ ++
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEM-------MDLKIPLSKEVYSSVI 591
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+Y K G + ++ M+ ++TY +I A+ A + ++ LF M ++ ++
Sbjct: 592 CAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQ 651
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P + SL+RA+ G+P K+ + F+ I + F +V A L+ + E+ G+
Sbjct: 652 PDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGL 711
Query: 296 LEVMQ 300
+++M+
Sbjct: 712 IKLME 716
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 150/350 (42%), Gaps = 36/350 (10%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E F M+ EG N S+ AL+ AY G+ +AFS+ +K PDV
Sbjct: 352 CGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKN-GFHPDVV 410
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + K+ +K + M +PN V+YN LIDAYG + E L +M
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM 470
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P++ ++ L A G GQ ++ + GI+ + +N + SY G +
Sbjct: 471 ERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEY 530
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVID--------------------------------- 211
+K ++ M+ VTYN++I
Sbjct: 531 DKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSV 590
Query: 212 --AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
A+ + G + + E +F M+ +P +T +++ AY A EK ++ ++ D+
Sbjct: 591 ICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDV 650
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
D++ + L+ A+ + A++ + E M+++ + ++ MV A S
Sbjct: 651 QPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS 700
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 37/346 (10%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + + MKN + + Y+++I+ + D+ + L
Sbjct: 127 KNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFF 186
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ TYN LI+A+GRA + + ML P T N + A G+SG
Sbjct: 187 EMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 246
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+K G+ P + T NI+L +Y + + K+ + E M+ + T N
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLN 306
Query: 208 IV-------------IDAFGR------------------------AGDLKQMEYLFRLMR 230
IV ID F G ++ + F M
Sbjct: 307 IVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTML 366
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+E +KP+ V+ +L+ AY G ++ SV I + D V + L++AYG+
Sbjct: 367 AEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ V E+M++ CKP+ V+Y ++ AY + G+ A E +E+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMER 472
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 7/315 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C Q K + A G NT ++ + + +Y G +DKA SL M+ T +PD
Sbjct: 490 GRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR-TKKVKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++LI C K + + L +M I + Y+++I AY + E E
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM C PDV T + A+ + + + + ++ +QP + L+ ++ K G
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K+ + E+M++ + ++ ++ A + +++ L +LM S L
Sbjct: 669 QPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVM 299
L+ G +GK E + + I S ++ ++ L+ A G + + E VL+ M
Sbjct: 729 QLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIE---VLQWM 785
Query: 300 QQRGCKPDKVTYRTM 314
++ G +P YR++
Sbjct: 786 EEAGLQPSVGMYRSI 800
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 5/197 (2%)
Query: 148 QIDTMEKCYEKFQSAGIQPSI----NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
QI ++E + F+ Q + + +N+++ + + ++ + MQK+
Sbjct: 138 QIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDA 197
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
TYN +I+A GRAG + + M I PS T +L+ A G +G ++ +V +
Sbjct: 198 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 257
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + D V N ++ AY R ++++ E+M+ +PD T ++ G
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 324 KNHAKE-FQDLVEKMDE 339
A + F + EK E
Sbjct: 318 NGKAIDIFNSMKEKRSE 334
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 24/338 (7%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ A+ ++ KA E MK
Sbjct: 133 VMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCI 192
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP + TY+IL+++ +A +V L D+ + P+ TYN ++DAYG+ M E
Sbjct: 193 ERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKE 252
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 253 MESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMIT 312
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YG+A EK +V+E M++ + VT +I + + + +F + + + K
Sbjct: 313 NYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKV 372
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV----------DAYGRL 286
+L S++ AY G +D +LDT C+V AY +
Sbjct: 373 HLSSLNSMLEAYCMNG----------LHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKA 422
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ +L+ M ++G P+K + + A+ T+ K
Sbjct: 423 NDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRK 460
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A+ ++ L+S GR G A L M+N+ C+PD + Y+ LI + L + DK +A
Sbjct: 122 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS-GCKPDTSVYNSLIGAHL--HSRDKTKA 178
Query: 85 LLSDMS-------TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
L + + +P VTYN L+ A+ +A ++++ + PDV+T N
Sbjct: 179 LAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYN 238
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L A+G +G I ME + +S +P + TFNIL+DSYG+ F+KM V + + +
Sbjct: 239 GVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRS 298
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T T+N +I +GRA ++ E + M KP+ VT L+ Y H K
Sbjct: 299 KERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKA 358
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + S + N +++AY E +L+ Q+ P+ TY+ + +A
Sbjct: 359 RQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVVPNGSTYKLLYKA 418
Query: 318 YSTNGMKNHAKEFQDLVEKMDE 339
Y+ N Q L+++M++
Sbjct: 419 YTK---ANDKLLVQKLLKRMNK 437
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR + + + M+ D YS LI + L S M
Sbjct: 94 LFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS 153
Query: 93 GIRPNTVTYNTLIDAY----GRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
G +P+T YN+LI A+ + K A+ KM E C+P + T N LRAF +G
Sbjct: 154 GCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAG 213
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ ++ + + P + T+N +LD+YGK G ++M +V+ M+ ++T+N
Sbjct: 214 DTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFN 273
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+ID++GR +ME +F+ + + +P+ T S++ YG A EK SV+ ++
Sbjct: 274 ILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEEL 333
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ V CL+ Y C ++ + V + + K + +M+ AY NG+ A
Sbjct: 334 GFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEA 393
Query: 328 KEFQD 332
D
Sbjct: 394 DRLLD 398
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 24/338 (7%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ A+ ++ KA E MK
Sbjct: 20 VMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCI 79
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP + TY+IL+++ +A +V L D+ + P+ TYN ++DAYG+ M E
Sbjct: 80 ERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKE 139
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 140 MESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMIT 199
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YG+A EK +V+E M++ + VT +I + + + +F + + + K
Sbjct: 200 NYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKV 259
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV----------DAYGRL 286
+L S++ AY G +D +LDT C+V AY +
Sbjct: 260 HLSSLNSMLEAYCMNG----------LHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKA 309
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ +L+ M ++G P+K + + A+ T+ K
Sbjct: 310 NDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRK 347
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A+ ++ L+S GR G A L M+N+ C+PD + Y+ LI + L + DK +A
Sbjct: 9 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS-GCKPDTSVYNSLIGAHL--HSRDKTKA 65
Query: 85 LLSDMS-------TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
L + + +P VTYN L+ A+ +A ++++ + PDV+T N
Sbjct: 66 LAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYN 125
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L A+G +G I ME + +S +P + TFNIL+DSYG+ F+KM V + + +
Sbjct: 126 GVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRS 185
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T T+N +I +GRA ++ E + M KP+ VT L+ Y H K
Sbjct: 186 KERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKA 245
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + S + N +++AY E +L+ Q+ P+ TY+ + +A
Sbjct: 246 RQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVVPNGSTYKLLYKA 305
Query: 318 YSTNGMKNHAKEFQDLVEKMDE 339
Y+ N Q L+++M++
Sbjct: 306 YTK---ANDKLLVQKLLKRMNK 324
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 4/312 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + +L+SA+ +S KA E MK T
Sbjct: 126 VMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYFEKMKTT 185
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL+++ +A ++V L D+ + P+ T+N ++D YG+ M E
Sbjct: 186 ERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIRE 245
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S + D+ T N + ++G Q D ME+ ++ + +P++ TFN ++
Sbjct: 246 MESVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMIL 305
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA +K V + M Y+ + VT+ +I +G G + LF + ++
Sbjct: 306 NYGKARLKDKAENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPI 365
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G ++ S+ + I D + L AY + + +L
Sbjct: 366 KVSTLNAMLDVYCINGLQQEADSLFTRAKSIKIFPDATTYKLLYKAYTKANSKELLDKLL 425
Query: 297 EVMQQRGCKPDK 308
+ M + P+K
Sbjct: 426 KQMDKDSVIPNK 437
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 16/347 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
LGK + + E+F+ M + A+ ++ L+S G+ G A L M+NT C+
Sbjct: 91 LGKHDKWLQCLEVFRWMQRQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEMRNT-GCR 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDM-------STQGIRPNTVTYNTLIDAYGRAKM 113
PD + Y+ LI + L + DK +AL+ + +T+ +PN VTYN L+ A+ +A+
Sbjct: 150 PDTSVYNSLISAHLHSR--DKSKALVKALGYFEKMKTTERCKPNIVTYNILLRAFAQARD 207
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
++ + PD++T N + +G +G I ME + +S ++ + T+N+
Sbjct: 208 VNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKSNQVKLDLITYNL 267
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+DSYGK F+KM V + + + T+ T+N +I +G+A + E +F+ M
Sbjct: 268 LIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMTDMG 327
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
PS VT SL+ YG G + + S + + N ++D Y E
Sbjct: 328 YTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYCINGLQQEAD 387
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD-LVEKMDE 339
+ + PD TY+ + +AY+ K ++KE D L+++MD+
Sbjct: 388 SLFTRAKSIKIFPDATTYKLLYKAYT----KANSKELLDKLLKQMDK 430
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 24/338 (7%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ A+ +S KA E MK
Sbjct: 132 VMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKCI 191
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP + TY+IL+++ +A +V L D+ + P+ TYN ++DAYG+ M E
Sbjct: 192 ARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMIKE 251
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME L++M S+ C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 252 MESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMIT 311
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V++ M++ Y VT +I + + + +F + S + K
Sbjct: 312 NYGKARLREKAEYVVKKMEELGYKPNYVTQECLIMMYAHCDCVSKARQVFDELVSSQNKV 371
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV----------DAYGRL 286
+L S++ AY G +D +LDT C+V AY R
Sbjct: 372 QLSSLNSMLDAYCMNG----------LHTEADQLLDTALQKCVVPNGSTYKLLYKAYTRA 421
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ +L+ M ++G P+K + + A+ T+ K
Sbjct: 422 NDKVLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERK 459
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A+ ++ L+S GR G A L M+N+ C+PD + Y+ LI + L + DK +A
Sbjct: 121 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS-GCKPDTSVYNSLIGAHL--HSRDKSKA 177
Query: 85 LLSDMS-------TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
L + +P VTYN L+ A+ +A ++++ + PD++T N
Sbjct: 178 LAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYN 237
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L A+G +G I ME + +S +P + TFNIL+DSYG+ F+KM V + + +
Sbjct: 238 GVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRS 297
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T T+N +I +G+A ++ EY+ + M KP+ VT L+ Y H K
Sbjct: 298 KERPTHPTFNSMITNYGKARLREKAEYVVKKMEELGYKPNYVTQECLIMMYAHCDCVSKA 357
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + +S + N ++DAY E +L+ Q+ P+ TY+ + +A
Sbjct: 358 RQVFDELVSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLDTALQKCVVPNGSTYKLLYKA 417
Query: 318 YSTNGMKNHAKEFQDLVEKMDE 339
Y+ N Q L+++M++
Sbjct: 418 YTR---ANDKVLVQKLLKRMNK 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 5/305 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR + + + M+ D YS LI + L S M
Sbjct: 93 LFEELGRRDAWLQCLEVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS 152
Query: 93 GIRPNTVTYNTLIDAY----GRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
G +P+T YN+LI A+ ++K A+ KM C+P + T N LRAF +G
Sbjct: 153 GCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAG 212
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ ++ + + P I T+N +LD+YGK G ++M +V+ M+ ++T+N
Sbjct: 213 DTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFN 272
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+ID++GR +ME +F+ + + +P+ T S++ YG A EK V++ ++
Sbjct: 273 ILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKAEYVVKKMEEL 332
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ V CL+ Y C ++ + V + + K + +M+ AY NG+ A
Sbjct: 333 GYKPNYVTQECLIMMYAHCDCVSKARQVFDELVSSQNKVQLSSLNSMLDAYCMNGLHTEA 392
Query: 328 KEFQD 332
+ D
Sbjct: 393 DQLLD 397
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ + M++ G N +F +L+ + + G D A LL M +P+V TYS LI
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV-AKGMRPNVVTYSALI 291
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ F + + +L +M T+G+ P+ TY+ LI +A E E L +M C
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV + + AF SG++ +K ++ + P + T+N ++D K G + +
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411
Query: 191 MEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+E MQ+ +VTY+ VI+ ++ L + + L M P VT +++
Sbjct: 412 LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 471
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ E+ +L+ + + + V + L+ + + E + V+E M+ GC P+ V
Sbjct: 472 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 531
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY TMV +G KE Q LV++M +
Sbjct: 532 TYNTMVNGLCVSG---RIKEAQQLVQRMKD 558
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 174/346 (50%), Gaps = 15/346 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A +L MV +G N +++AL+ +S F +A +LE MK T
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK-TRGVT 316
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI KA ++ + +L M+ G P+ V Y+++I A+ ++ E + T
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYG 179
L +M + PDV T N + G+I + E+ Q +G + P + T++ +++
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ + +++ M K + +VTY +ID + G L++ EYL + M+ P+ V
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVL 296
T +L+ A K ++ V+ + N+ + V +N +V+ GR+K E + ++
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIK---EAQQLV 553
Query: 297 EVMQ--QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ M+ + C PD TYRT+V A ++ + +E + L+E+M T
Sbjct: 554 QRMKDGRAECSPDAATYRTIVNALMSSDL---VQEAEQLLEQMKST 596
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GCD N ++TAL++A+ R+ ++A LLE M+ C P++ TY++L+ + K
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGA 232
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
Q ++ M G PN +T+N+L+D + + + L M+++ P+V T + +
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
S + ++ E+ ++ G+ P T++ L+ KA E+ ++ M +
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+V Y+ +I AF ++G L + + + MR +R P VT +++ GK + +L
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412
Query: 262 RFIDNS-DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ S D++ D V ++ +++ + E + +L+ M + GC PD VTY T++
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 7/340 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L +CK+ +A +LF++ + C+ + S+ ++S + +G A LLE MK+
Sbjct: 86 VLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSA-GFA 144
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ +I + A D L M G PN VTY LI A+ RAK E
Sbjct: 145 PDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKL 201
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P++ T N + A + + +K G P++ TFN L+D + K
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ + ++ M +VTY+ +ID ++ + + + M++ + P T
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A K E+ +LR + S D V ++ ++ A+ + E + L+ M+
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
++ PD VTY T++ G E Q ++E+M E+
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLG---KIAEAQVILEQMQES 418
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G ++N+L+ R K E L CEPDV + N + F N+G +
Sbjct: 69 SIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDL 128
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ E+ +SAG P T ++ + AG + M++++ +VTY +
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTAL 185
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I AF RA L++ L MR P+ VT LV A V++ +
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + FN LVD + + + + +L +M +G +P+ VTY ++
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + E+A L Q M GC N ++T L+S ++ D+A ++E M+N C P
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA-GCPP 528
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
++ TY+ ++ + + Q L+ M P+ TY T+++A + + E E
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQ 588
Query: 120 TLVKMLS 126
L +M S
Sbjct: 589 LLEQMKS 595
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKY-----HYSWTI------------------------------VTYNIV 209
+M +++ M + HY ++I VTY V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I ++G ++ F M ER+ P + SL+ + K +K ++ + + I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LDT+FFN ++D++ + E + + ++M + G KP+ +TY T++ Y G + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535
Query: 330 F 330
Sbjct: 536 L 536
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTYN++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + DTV + ++ + + E M P + Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ + + AKE ++E +D CL
Sbjct: 449 SLIHSLCIFDKWDKAKEL--ILEMLDRGICL 477
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 318 GRCTE---ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ P+TVTY T+I ++ +
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + D ++ + GI FN ++DS+ K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + R +++S + D + +N ++ + + A K + + +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 8/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI SC A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTYN +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 334 GLKPEITTYGTLLQGYATKG 353
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 133/338 (39%), Gaps = 36/338 (10%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + G D+A + M+ PD TY +I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIG 417
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M + + P + YN+LI + + + + +++ML
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D N + + G++ EK ++ G++P+I T++ L+D Y AG ++ + ++
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH- 250
M VTYN +I+ + + ++ LFR M S + P +T +++
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Query: 251 ----AGKPEKLG---------------------------SVLRFIDN---SDIMLDTVFF 276
A K +G LR N +D+ L+T F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
N ++ A ++ E K + + G PD TY M
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G N +++ L+ Y +G D+A LL M + +PD
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
S+VR G + G+ L ID L+ + +D
Sbjct: 729 SIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A +L + G + + TAL+SA G +G +A +L + +P
Sbjct: 246 ARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPR 305
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K +K + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 306 TRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLK 365
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + ++G+QP + +N+++D++GK
Sbjct: 366 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYN 425
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
M++ +VT+N +IDA + G + LF MR P T
Sbjct: 426 CLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYN 485
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + + ++L + ++ + + + LVD YGR F E +EVM+
Sbjct: 486 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD 545
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 546 GLKPSPTMYHALVNAYAQRGLADHA 570
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 153/309 (49%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M D G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 323 KNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 381
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G++P+ YN +ID +G+ +M E
Sbjct: 382 ILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEG 441
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +E+ + + P T+NI+++ G+ + +
Sbjct: 442 IEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVE 501
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M++ I+TY ++D +GR+G K+ +M+++ +KPS +LV AY
Sbjct: 502 TMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAY 561
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + TV N L++A+G + E VL+ M++ +PD
Sbjct: 562 AQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDV 621
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 622 ITYTTLMKA 630
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 153/309 (49%), Gaps = 2/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M + QPD + Y++
Sbjct: 358 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDRHFYNV 416
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K + M +GI P+ VT+NTLIDA+ + +M +
Sbjct: 417 MIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESN 476
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P T N + G + +E + + G+ P+I T+ L+D YG++G F++
Sbjct: 477 CPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAI 536
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+ + Y+ +++A+ + G + + MR++ ++ S V L SL+ A+
Sbjct: 537 ECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAF 596
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + SVL+F+ +D+ D + + L+ A R++ F ++ + E M GC PD+
Sbjct: 597 GEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDR 656
Query: 309 VTYRTMVRA 317
R M+R+
Sbjct: 657 KA-RAMLRS 664
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 7/284 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDK---VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD+ +YS L+ S L ++ LL D+ + P+ ++ LI A+ RA +
Sbjct: 195 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 254
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLD 176
L + P + + A G +G++ E + +F AG I+P +N LL
Sbjct: 255 LDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 314
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y K G + V++ M + TY++++DA+ RAG + L + M ++ +KP
Sbjct: 315 GYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 374
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S ++ + G +K +VLR + S + D F+N ++D +G+ C
Sbjct: 375 SSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAF 434
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M++ G +PD VT+ T++ A+ G + A E L E+M E+
Sbjct: 435 NRMREEGIEPDVVTWNTLIDAHRKGGRHDRAME---LFEEMRES 475
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ + M ++G N ++T L+ YGRSG F +A +E MK +
Sbjct: 490 LLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD-GLK 548
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+L++A+G + E
Sbjct: 549 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSV 608
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M D PDV T ++A Q D + YE+ ++G P
Sbjct: 609 LQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAP 654
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 155/312 (49%), Gaps = 4/312 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ ++ KA + MK
Sbjct: 118 VMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGM 177
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL+++ +A ++V +L D+ + P+ T+N ++DAYG+ M E
Sbjct: 178 ERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIRE 237
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME L +M S C+PD+ T N + ++G + ME+ ++ + + S+ TFN ++
Sbjct: 238 MEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMIL 297
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA +K V + M Y+ + VT+ +I +G + + LF + +
Sbjct: 298 NYGKARLKDKAEDVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHI 357
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P++ S+ ++ I D+ F L AY + + +L
Sbjct: 358 KVSTLNAMLDVYCINGLPQEADSLFERANSIKIYPDSSTFKLLYKAYTKANQKELLDKLL 417
Query: 297 EVMQQRGCKPDK 308
+ M + G P+K
Sbjct: 418 KHMDKDGIVPNK 429
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY----GRAKMFAEM 117
D YS LI K L S+M G RP+T YN LI A+ + K A+
Sbjct: 108 DNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKA 167
Query: 118 ELTLVKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM E C+P++ T N LRAF + ++ + ++ + + P I TFN ++D
Sbjct: 168 IGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMD 227
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGK G +M AV+ M+ ++T+N++ID++G+ + +ME +F+ + + +
Sbjct: 228 AYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERA 287
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S T S++ YG A +K V + + + V L+ YG C + +
Sbjct: 288 SLPTFNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLF 347
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + T M+ Y NG+ A
Sbjct: 348 DELVESKAHIKVSTLNAMLDVYCINGLPQEA 378
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY----------GKA-GHFEKMS 188
+ G GQ + + ++ G +P + +N L+ ++ KA G+F+KM
Sbjct: 116 ISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMK 175
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
ME + IVTYNI++ AF +A +++Q+ LF+ + + P T ++ AY
Sbjct: 176 G-MERCKP-----NIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAY 229
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G ++ +VL + ++ D + FN L+D+YG+ + F +M+ V + + + +
Sbjct: 230 GKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASL 289
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ +M+ Y +K+ A +D+ ++M +
Sbjct: 290 PTFNSMILNYGKARLKDKA---EDVFKRMTD 317
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 161/336 (47%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + A +F+ G +F+AL+SAYGRSGL ++A S+ MK +P
Sbjct: 243 LGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY-GLRP 301
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F +V +M G++P+ +T+N+L+ R ++
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + E DV++ N L A GQ+D + + I P++ +++ ++D + K
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG F++ + M+ + V+YN ++ + + G ++ + R M S IK VT
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG GK +++ V + ++ + + ++ L+D Y + + E + +
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G + D V Y ++ A NG+ A D + K
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 149/332 (44%), Gaps = 22/332 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M + + + S+ LL A + G D AF +L M P+V +YS
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-VKRIMPNVVSYST 414
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA FD+ L +M GI + V+YNTL+ Y + E L +M S
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV T N L +G G+ D ++K + + + + P++ T++ L+D Y K G +++
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + +V Y+ +IDA + G + L M E I P+ VT S++ A+
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 249 GHAGKPEKL-----GSVLRFIDNSDIMLDTVFFNCLVDAYGRL-------------KCFA 290
G + ++ G L F ++ L N ++ +G+L +
Sbjct: 595 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ 654
Query: 291 EMKGVLEV---MQQRGCKPDKVTYRTMVRAYS 319
E+ +LEV M Q KP+ VT+ ++ A S
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 22/267 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K + ++A LF M G + S+ LLS Y + G ++A +L M + +
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ L+ K +D+V+ + ++M + + PN +TY+TLID Y + ++ E
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ S DV + + A +G + + ++ GI P++ T+N ++D++G++
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 182 GHFEKMS-----AVMEYMQKYHYSWTIVTYNIVIDAFGRAG----------------DLK 220
++ + + + + T N VI FG+ +L
Sbjct: 598 ATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELS 657
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ +FR M IKP+ VT +++ A
Sbjct: 658 CILEVFRKMHQLEIKPNVVTFSAILNA 684
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ G G++ ++ +E + G ++ F+ L+ +YG++G E+ +V M++Y
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 200 SWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VTYN VIDA G+ G + KQ+ F M+ ++P +T SL+ G E
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK---PDKVTYRTMV 315
++ + N I D +N L+DA + +M E++ Q K P+ V+Y T++
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICK---GGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 316 RAYSTNG 322
++ G
Sbjct: 417 DGFAKAG 423
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 48/229 (20%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++ ++F M E N +++ L+ Y + GL+ +A + K + + D
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK-SAGLRAD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----------- 111
V YS LI + K +L+ +M+ +GI PN VTYN++IDA+GR+
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Query: 112 -----------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
++F ++ ++DCE + ++C L F Q
Sbjct: 609 GGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQ 668
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++ I+P++ TF+ +L++ + FE S ++E ++ +
Sbjct: 669 LE-------------IKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 704
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 105 IDAYGRAKMFAEMELTLVKML--SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE----K 158
ID G +MF + L+ L S+DC +R GN + D YE +
Sbjct: 173 IDFSGDDEMFHSLMLSFESKLCGSDDC-------TYIIRELGNRNECDKAVGFYEFAVKR 225
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ Q + + ++ + G+ G + E Y T+ ++ +I A+GR+G
Sbjct: 226 ERRKNEQGKLAS--AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGL 283
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVF 275
++ +F M+ ++P+ VT +++ A G G K V +F D + + D +
Sbjct: 284 HEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK--QVAKFFDEMQRNGVQPDRIT 341
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
FN L+ R + + + + M R + D +Y T++ A G + A E
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + EG A+ + ++ A GR G D +LL+ P + DV Y+
Sbjct: 121 EWALALLRWAGKEGA-ADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTT 179
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ + +A +++ L +++ QG+ P VTYN ++D YGR + + + L +M +
Sbjct: 180 VLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAA 239
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
EPD +T + + A G +D +E ++ G P + T+N LL +GKAG++ +
Sbjct: 240 GVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEA 299
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M++ VTYN + + RAG ++ M S+ + P+ T +++ A
Sbjct: 300 LRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTA 359
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
YG+ GK ++ ++ + + + + +N ++ G+ F M +L M + GC P+
Sbjct: 360 YGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPN 419
Query: 308 KVTYRTMVRAYSTNGMKNH 326
+VT+ TM+ GM+++
Sbjct: 420 RVTWNTMLAVCGKRGMEDY 438
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQ 60
L + + E+A ELF + +G ++ +L YGR G + + +LL+ M+ +
Sbjct: 184 LSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR-AAGVE 242
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T S +I +C + D+ A D+ +G P VTYN L+ +G+A + E
Sbjct: 243 PDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRV 302
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C+PD T N + +G + +C + S G+ P+ T+N ++ +YG
Sbjct: 303 LGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGN 362
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ A+ + M+K + + TYN+V+ G+ M + M P+ VT
Sbjct: 363 VGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVT 422
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G + + VL + + + L +N L+ AYGR + M
Sbjct: 423 WNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT 482
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G P TY ++ S G + A Q +V KM
Sbjct: 483 SAGFTPCITTYNALLNVLSRQGDWSTA---QSIVSKM 516
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 150/337 (44%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + M GC + ++ L Y R+G F++A L+ M +
Sbjct: 289 VFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMA-SKGLL 347
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + D+ AL M G PN TYN ++ G+ F M
Sbjct: 348 PNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEM 407
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G D + + E +S G++ S +T+N L+ +YG+
Sbjct: 408 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGR 467
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + M ++ I TYN +++ R GD + + MR++ KP+ +
Sbjct: 468 CGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQS 527
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT-VFFNCLVDAYGRLKCFAEMKGVLEVM 299
L++ Y G + ++ + S + + V LV A + + M+ + +
Sbjct: 528 YSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEV 587
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ RG PD V + +M+ Y+ NGM + A E D +++
Sbjct: 588 KARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKR 624
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 158/338 (46%), Gaps = 3/338 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + + M G + + ++ L++AYGR G AF + M + P
Sbjct: 431 GKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEM-TSAGFTPC 489
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ + + Q+++S M T+G +PN +Y+ L+ Y + A +
Sbjct: 490 ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIEN 549
Query: 123 KMLSEDCEPDVWTMNCTLR-AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ W + TL A ++D ME +++ ++ G P + FN +L Y K
Sbjct: 550 EVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKN 609
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR-SERIKPSCVT 240
G + K + V + +++ S ++TYN ++D + + + + E + ++ S+ +KP V+
Sbjct: 610 GMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVS 669
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ + G ++ VL + + V ++ LV Y L+ F+E + V+ M
Sbjct: 670 YNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMV 729
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Q G KP ++TYR +V +Y A+ F V + D
Sbjct: 730 QHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETD 767
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 119/307 (38%), Gaps = 38/307 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C A +++ M G ++ ALL+ R G + A S++ M+ T +P+
Sbjct: 466 GRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMR-TKGFKPN 524
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+YS+L++ K + A+ +++ G + P+ V TL+ A + + ME
Sbjct: 525 EQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAF 584
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK- 180
++ + PD+ N L + +G + ++ + +G+ P + T+N L+D Y K
Sbjct: 585 QEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKC 644
Query: 181 -----------------------------------AGHFEKMSAVMEYMQKYHYSWTIVT 205
G ++ V+ M + VT
Sbjct: 645 SESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVT 704
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ ++ + + + M +KP +T +V +Y A + E+ L +
Sbjct: 705 YHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVS 764
Query: 266 NSDIMLD 272
+D+ D
Sbjct: 765 ETDLDFD 771
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 130/277 (46%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PDV TY+ L+ KA + +M +G +PN T+N LI +G F EM
Sbjct: 101 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + C PD+ T N L FG +G + +++ + AG P +TFN L+ SY
Sbjct: 161 VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 220
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G F++ AV + M + + + +YN V+ A R G KQ E + M+ R KP+ +
Sbjct: 221 RCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNEL 280
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T CSL+ AY + + E++ ++ I + I V LV + E + +
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+QRG PD T MV Y M A E D +++
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR 377
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 173/405 (42%), Gaps = 71/405 (17%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M +EGC N +F AL+ +G G F + + E +K T C PD+
Sbjct: 116 KAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK-TFQCSPDI 174
Query: 64 -----------------------------------NTYSILIKSCLKAFAFDKVQALLSD 88
+T++ LI S + +FD+ A+
Sbjct: 175 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKR 234
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ P+ +YN ++ A R ++ + E L +M C+P+ T L A+ N +
Sbjct: 235 MLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 294
Query: 149 IDTM-----------------------------------EKCYEKFQSAGIQPSINTFNI 173
I+ M E+ + + + G P I T N
Sbjct: 295 IERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNA 354
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++ YG+ K + +++ M++ ++ ++ TYN ++ + R+ + ++ E + R + ++
Sbjct: 355 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKG 414
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
I+P ++ +++ AY G+ VL + S D + +N + +Y F E
Sbjct: 415 IRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAI 474
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
V+ M + GCKP++ TY ++V Y ++ A F + + K+D
Sbjct: 475 DVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLD 519
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 7/342 (2%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A EL MV++G + ++T LLS + ++G A + E M+N C+P++ T++
Sbjct: 85 PPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNE-GCKPNICTFN 143
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LIK F ++ + D+ T P+ VT+NTL+ +G+ M +E+ +M
Sbjct: 144 ALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRA 203
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P+ T N + ++ G D Y++ AG+ P ++++N +L + + G +++
Sbjct: 204 GFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQS 263
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M+ +TY ++ A+ ++++M L + S I+P V L +LV
Sbjct: 264 EKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLV 323
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + D N +V YGR + A+ +L+ M++ G P
Sbjct: 324 NSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPS 383
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
TY +++ YS + F+ E + E RPD
Sbjct: 384 LTTYNSLMYMYS------RSANFERSEEILREILAKGIRPDI 419
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 13/269 (4%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KM 113
PD T++ILI+ + D+ + DM + G P+ VTYNTLI+ +A ++
Sbjct: 176 PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCEL 235
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F E++ DC PD+ T + F SG++ +E+ +GIQP++ TFN+
Sbjct: 236 FKEIQS------RSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNV 289
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+D +GK G+ + A+ M + S +VT+ +ID + RAG + + +M++
Sbjct: 290 LIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRN 349
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ P+ T L+ A + + L I NS I+ +N ++D + + E
Sbjct: 350 VSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGN 409
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L+ M+++ C PDKVT+ ++ + G
Sbjct: 410 VILKEMEEKRCDPDKVTFTILIIGHCVKG 438
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 35/325 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+F+ M GC + ++ L++ ++ + L + +++ DC PD+ TY+
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K+ + L +M GI+PN +T+N LID +G+ AE E KM D
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C DV T + + +GQ++ K + ++ + P++ T+ +L+++ K +
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ ++ YN VID F +AG++ + + + M +R P VT L+
Sbjct: 375 DFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILI--I 432
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GH K GR+ E + M C PD
Sbjct: 433 GHCVK------------------------------GRM---FEAINIFNRMLATRCAPDN 459
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDL 333
+T +++ GM N A + +
Sbjct: 460 ITVNSLISCLLKAGMPNEAYRIRKM 484
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 1/271 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD L+ +A FD V+ LL+++ + +R N+ YN L+ + E
Sbjct: 106 PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYL 165
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ L PD WT N +R G +D + ++ +S G P + T+N L++ K
Sbjct: 166 FKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCK 225
Query: 181 AGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
A ++ + + +Q + S IVTY +I F ++G +K+ LF M I+P+ +
Sbjct: 226 ANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVI 285
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ +G G + ++ R + D D V F L+D Y R VM
Sbjct: 286 TFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVM 345
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ R P TY ++ A N A++F
Sbjct: 346 KTRNVSPTVYTYAVLINALCKENRLNEARDF 376
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK +A +++ M C A+ +FT+L+ Y R+G + MK T + P
Sbjct: 294 FGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMK-TRNVSP 352
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY++LI + K ++ + L + I P YN +ID + +A E + L
Sbjct: 353 TVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVIL 412
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + C+PD T + G++ + + + P T N L+ KA
Sbjct: 413 KEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKA 472
Query: 182 G 182
G
Sbjct: 473 G 473
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 12/312 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGR----SGLFDKAFSLLEHMKNTP 57
+GK Q A +F + + T F A++ A+ R + D A HMK +
Sbjct: 106 MGKQGQLRLASWIFSQL--QLSSRTTPVFNAIIMAHLRCKNVARALDSALDHFGHMKTSV 163
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQAL-LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
P + TY++L ++C +A DK +AL L + ++P+ T+N ++DAY + ++ +
Sbjct: 164 HSCPSLATYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRD 223
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILL 175
ME L +M PD+ T N + A+G +G ME+ Y+ + +G +PS TFN +L
Sbjct: 224 MEYKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSML 283
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
SYG++ KM V+ M + T+N ++ ++GRAG+L M F M +K
Sbjct: 284 ASYGQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVK 343
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS--DIMLDTVFFNCLVDAYGRLKCFAEMK 293
P TL L+RAY G ++ ++ FI+ S DI + L AYG + +M
Sbjct: 344 PQVSTLDVLLRAYAEHGLVDEAEAL--FINASKLDIKPAVSSYLILFKAYGEERQLDKMT 401
Query: 294 GVLEVMQQRGCK 305
++ M+Q G +
Sbjct: 402 VLMSKMEQSGVE 413
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L A ++GL DKA +L + D +PD T++ ++ + K + ++ L +
Sbjct: 171 TYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKE 230
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
MS G+RP+ VT+N LIDAYGRA F +ME T +++ C+P T N L ++G S
Sbjct: 231 MSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSR 290
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ ME+ + AG+ P + TFN L+ SYG+AG + M + M + + T +
Sbjct: 291 ELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLD 350
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++ A+ G + + E LF IKP+ + L +AYG + +K+ ++ ++ S
Sbjct: 351 VLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQS 410
Query: 268 DIMLDTVFFNCLVDAYG 284
+ F +++Y
Sbjct: 411 GVESGQEFLLQALESYA 427
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 4/339 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M +CK+ E +A E+ M GCD N S+ L++ G FD+A L+E M +
Sbjct: 214 MDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM-SMLG 272
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+ +TY+ LI+ K F++ L +M +G P VTYNT++ + R ++
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M++ED PD+ + N + + G + + +S + PS+ T+N L+D
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G+ + + + M K+ +VT+ I++ F + G+L + LF M S +KP C
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ + + G P K + + D + +N L++ +L F + +++
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
M+ G PD VTY +++ A+ +G+ A+E F D+++K
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKK 551
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 9/330 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A++L + M+ G ++ ++ + R G A L+ M N D
Sbjct: 286 GFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE-DLM 344
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ +Y+ LI + F + L S++ ++ + P+ VTYNTLID R +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ PDV T +R F G + ++ +++ S G++P + + K
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ K + E M+ + ++TYN++I+ + G+ L + MR E I P VT
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLE 297
S++ A+ +G K V + I V + L+ +Y GRL FA K +
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLD-FA--KKYFD 581
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
MQ +G P+ +TY ++ M + A
Sbjct: 582 EMQDKGVSPNVITYNALIYGLCKENMMDVA 611
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELF M+ G + ++T + + G KAF + E MK PD+ TY++LI
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK-AEGFPPDLITYNVLI 494
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K FD L+ M +GI P+ VTY ++I A+ + + + E ML +
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V T + ++ G++D +K +++ Q G+ P++ T+N L+ K + +
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ S TY I+I+ + L++ M IKP T +L++ H
Sbjct: 615 FAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK---H 671
Query: 251 AGKPEKLGSVLRF 263
K KL +VLR
Sbjct: 672 LSKDYKLLAVLRL 684
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 126/320 (39%), Gaps = 16/320 (5%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTP----------------DCQPDVNTYSILIKS 72
+F A+L ++G A+ ++E + + V +LI+
Sbjct: 87 AFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQV 146
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K +K + M G+ P+ N ++ M E+E M+ P
Sbjct: 147 FAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPT 206
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ T N + + G++ + + + G P+ ++N+L++ G F++ ++E
Sbjct: 207 IVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIE 266
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + TYN +I F + ++ L R M P+ VT +++ + G
Sbjct: 267 QMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLG 326
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ L + N D+M D V +N L+ Y RL FAE + ++ + P VTY
Sbjct: 327 RVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYN 386
Query: 313 TMVRAYSTNGMKNHAKEFQD 332
T++ G + AK +D
Sbjct: 387 TLIDGGCRTGNLDIAKGMKD 406
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 1/228 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+ G + +FT L+ + + G A L + M + +PD Y+ I LK
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR-GLKPDCIAYTTRIVGELKLG 466
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
K + +M +G P+ +TYN LI+ + F + + KM E PD T
Sbjct: 467 NPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYT 526
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ A SG + E+ + GI PS+ T+ +L+ SY G + + MQ
Sbjct: 527 SIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
S ++TYN +I + + LF M S+ + P+ T L+
Sbjct: 587 GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 152 MEKC---YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+EKC + K + G+ P + N +L ++ V M K TIVT+N
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNT 212
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++D+ + G++ + + +MR P+ V+ LV G+ ++ ++ +
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + +N L+ + + + F E + M RG P VTY T++ + G + A+
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332
Query: 329 EFQDLVEKMD 338
+ D++ D
Sbjct: 333 RYLDVMVNED 342
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M + C A++ ++ L++AY R+G F K +++ M
Sbjct: 332 VFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAG-FSKEAAVVIEMMTQKGVM 390
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ +I + KA D+ L M G PNT TYN ++ G+ EM
Sbjct: 391 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKM 450
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C P+ T N L GN G + + + + +S G +P +TFN L+ +YG+
Sbjct: 451 LCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 510
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G S + M + ++ + TYN +++A R GD + E + M+S+ KP+ +
Sbjct: 511 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 570
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G + + I+ I + L+ A + + A + + +
Sbjct: 571 YSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 630
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ G KPD V + +M+ ++ N M + A+
Sbjct: 631 KHGYKPDMVIFNSMLSIFTRNNMYDQAE 658
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L+ GR + A LL+ + D DV Y+ ++ + + ++K L M
Sbjct: 188 LVRILGRESQYSVAAKLLDKIP-LQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEM 246
Query: 93 GIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G P VTYN ++D +G+ + + ++ L +M S+ + D +T + L A G +
Sbjct: 247 GPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLRE 306
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + + +S G +P T+N LL +GKAG + + +V++ M++ + VTYN ++
Sbjct: 307 AKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVA 366
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A+ RAG K+ + +M + + P+ +T +++ AYG AGK ++ + + + +
Sbjct: 367 AYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 426
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+T +N ++ G+ EM +L M+ GC P++ T+ T++ GM
Sbjct: 427 NTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGM 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
L+ GR ++ L K+ +D DV L A+ +G+ + +E+ + G
Sbjct: 188 LVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMG 247
Query: 164 IQPSINTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
P++ T+N++LD +GK G + K+ V+E M+ + T + V+ A R G L++
Sbjct: 248 PSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREA 307
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+ F ++S +P VT +L++ +G AG + SVL+ ++ ++ D+V +N LV A
Sbjct: 308 KDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAA 367
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
Y R E V+E+M Q+G P+ +TY T++ AY G ++ A
Sbjct: 368 YARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEA 412
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 150/350 (42%), Gaps = 37/350 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
EKA LF+ M + G ++ +L +G+ G + K +LE M+ + + D T S
Sbjct: 234 EKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMR-SKGLKFDEFTCS 292
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++ +C + + + +++ + G P TVTYN L+ +G+A ++ E L +M
Sbjct: 293 TVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 352
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C D T N + A+ +G E G+ P+ T+ ++D+YGKAG ++
Sbjct: 353 NCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEA 412
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M++ TYN V+ G+ +M + M+S P+ T +++
Sbjct: 413 LKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILAL 472
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-------KCFAEM-------- 292
G+ G + + V R + + D FN L+ AYGR K + EM
Sbjct: 473 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 532
Query: 293 --------------------KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ V+ M+ +G KP + +Y M++ Y+ G
Sbjct: 533 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 582
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 150/327 (45%), Gaps = 1/327 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+ +F+ M G + + +F L+SAYGR G A + M V TY+ L+
Sbjct: 483 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLN 541
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+ + + + ++SDM ++G +P +Y+ ++ Y + + +E + P
Sbjct: 542 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFP 601
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ L A + E+ + F+ G +P + FN +L + + +++ ++
Sbjct: 602 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 661
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ + + + +VTYN ++D + R G+ + E + + + ++KP V+ ++++ +
Sbjct: 662 QSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRK 721
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G ++ +L + I +N V Y + + E++ V+E M + C+P+++T+
Sbjct: 722 GLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTF 781
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ +V Y G + A +F ++ D
Sbjct: 782 KMVVDGYCRAGKYSEAMDFVSKIKTFD 808
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 153/323 (47%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +L + + + +++T +L AY R+G ++KA +L E MK
Sbjct: 191 ILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGP-S 249
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++ K+ +L +M ++G++ + T +T++ A R + E +
Sbjct: 250 PTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKD 309
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ S EP T N L+ FG +G ++ + T+N L+ +Y
Sbjct: 310 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYA 369
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG ++ + V+E M + +TY VIDA+G+AG + LF M+ P+
Sbjct: 370 RAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 429
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G + ++ +L + ++ + +N ++ G + V M
Sbjct: 430 TYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREM 489
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G +PD+ T+ T++ AY G
Sbjct: 490 KSCGFEPDRDTFNTLISAYGRCG 512
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 153/370 (41%), Gaps = 39/370 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++A +LF +M + GC NT ++ A+LS G+ ++ +L MK+ C P+
Sbjct: 404 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSN-GCFPN 462
Query: 63 VNTYSILIKSC---------------LKAFAF----DKVQALLS---------------- 87
T++ ++ C +K+ F D L+S
Sbjct: 463 RATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 522
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M+ G TYN L++A R + E + M S+ +P + + L+ + G
Sbjct: 523 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 582
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E+ E I PS LL + K +K+ Y +V +N
Sbjct: 583 NYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 642
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F R Q E + + + + + P VT SL+ Y G+ K +L+ ++ S
Sbjct: 643 SMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 702
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V +N ++ + R E +L M +RG +P TY T V Y+ GM
Sbjct: 703 QLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYG-- 760
Query: 328 KEFQDLVEKM 337
E +D++E M
Sbjct: 761 -EIEDVIECM 769
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 7/307 (2%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
T +L+ SG +++A L E + N+ + D + IL++ + +
Sbjct: 143 TTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAA 202
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
LL + Q + Y T++ AY R + + +M P + T N L F
Sbjct: 203 KLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVF 262
Query: 144 GNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G G+ + E+ +S G++ T + +L + + G + ++ Y
Sbjct: 263 GKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPG 322
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VTYN ++ FG+AG + + + M VT LV AY AG ++ V+
Sbjct: 323 TVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIE 382
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ +M + + + ++DAYG+ E + M++ GC P+ TY ++ S G
Sbjct: 383 MMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL---SMLG 439
Query: 323 MKNHAKE 329
K+ + E
Sbjct: 440 KKSRSNE 446
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV----TYNIVIDAFGRAGDLKQMEYLFRLM 229
L+ +GH+E+ + E++ S + I++ GR L +
Sbjct: 149 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKI 208
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KC 288
+ +++ AY GK EK ++ + V +N ++D +G++ +
Sbjct: 209 PLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRS 268
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ ++ GVLE M+ +G K D+ T T++ A + G+ AK+F
Sbjct: 269 WRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDF 310
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 161/320 (50%), Gaps = 3/320 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILI 70
H LF M + + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI
Sbjct: 1 HGLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLI 58
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + K ++ S + G P+ V YN +I+ +G+AK+F E + +M +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVM 118
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ + + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 119 PNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG
Sbjct: 179 FWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ EK ++++ + N I +++ ++ ++ +G++ + + ++ G + D+V
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 298
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y+TM+ AY G+ HAK
Sbjct: 299 YQTMIVAYERAGLVAHAKRL 318
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 95 VFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIK-CL 153
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI N V+YNTL+ YG A++F E
Sbjct: 154 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHL 213
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 214 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++S P +
Sbjct: 274 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A V + M+
Sbjct: 330 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMR 389
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 390 GLGYFPDSNVIALVLNAY 407
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 167 GQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 225
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 226 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 285
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 286 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 341
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 342 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANAVEVF 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L + V MQ+
Sbjct: 386 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHELDKANDVYMEMQEV 426
Query: 303 GC 304
GC
Sbjct: 427 GC 428
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 7/349 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M + C A++ ++ L++AY R+G +A ++E M
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK-GVM 383
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ +I + KA D+ L M G PNT TYN ++ G+ EM
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C P+ T N L GN G + + + + +S G +P +TFN L+ +YG+
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G S + M + ++ + TYN +++A R GD + E + M+S+ KP+ +
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G + + I I + L+ A + + A + + +
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 623
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ G KPD V + +M+ ++ N M + A + ++E + E L+ PD
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQA---EGILESIREDGLS---PDL 666
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 154/320 (48%), Gaps = 6/320 (1%)
Query: 9 EKAHELFQAMV----DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
E+A LF+ +V + Q + GR + A LL+ + + DV
Sbjct: 153 ERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIP-LQEYLLDVR 211
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVK 123
Y+ ++ + + ++K L M G P VTYN ++D +G+ + + ++ L +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M S+ + D +T + L A G + ++ + + +S G +P T+N LL +GKAG
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + +V++ M++ VTYN ++ A+ RAG K+ + +M + + P+ +T +
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ AYG AGK ++ + + + + +T +N ++ G+ EM +L M+ G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 304 CKPDKVTYRTMVRAYSTNGM 323
C P++ T+ TM+ GM
Sbjct: 452 CSPNRATWNTMLALCGNKGM 471
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 153/327 (46%), Gaps = 1/327 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+ +F+ M G + + +F L+SAYGR G A + M V TY+ L+
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLN 534
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+ + + + ++SDM ++G +P +Y+ ++ Y + + +E ++ P
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ L A + E+ + F+ G +P + FN +L + + +++ ++
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 654
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
E +++ S +VTYN ++D + R G+ + E + + + ++KP V+ ++++ +
Sbjct: 655 ESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRR 714
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G ++ +L + I +N V Y + FAE++ V+E M + C+P+++T+
Sbjct: 715 GLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ +V Y G + A +F ++ D
Sbjct: 775 KMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 156/366 (42%), Gaps = 44/366 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
EKA +LF+ M + G ++ +L +G+ G + K +L+ M+ + + D T S
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR-SKGLKFDEFTCS 285
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++ +C + + + +++ + G P TVTYN L+ +G+A ++ E L +M
Sbjct: 286 TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C D T N + A+ +G E G+ P+ T+ ++D+YGKAG ++
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M++ TYN V+ G+ +M + M+S P+ T +++
Sbjct: 406 LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL 465
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-------KCFAEM-------- 292
G+ G + + V R + + D FN L+ AYGR K + EM
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 293 --------------------KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-------MKN 325
+ V+ M+ +G KP + +Y M++ Y+ G ++N
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 326 HAKEFQ 331
KE Q
Sbjct: 586 RIKEGQ 591
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 154/370 (41%), Gaps = 39/370 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++A +LF +M + GC NT ++ A+LS G+ ++ +L MK+ C P+
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN-GCSPN 455
Query: 63 VNTYSILIKSC---------------LKAFAF----DKVQALLS---------------- 87
T++ ++ C +K+ F D L+S
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M+ G TYN L++A R + E + M S+ +P + + L+ + G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E+ + + I PS LL + K +K+ Y +V +N
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F R Q E + +R + + P VT SL+ Y G+ K +L+ ++ S
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V +N ++ + R E +L M +RG +P TY T V Y+ GM
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM---F 752
Query: 328 KEFQDLVEKM 337
E +D++E M
Sbjct: 753 AEIEDVIECM 762
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 152/323 (47%), Gaps = 2/323 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +L + + + +++T +L AY R+G ++KA L E MK
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP-S 242
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++ K+ +L +M ++G++ + T +T++ A R + E +
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ S EP T N L+ FG +G ++ + T+N L+ +Y
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG ++ + V+E M K +TY VIDA+G+AG + LF M+ P+
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G + ++ +L + ++ + +N ++ G + V M
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G +PD+ T+ T++ AY G
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCG 505
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
GR ++ L K+ ++ DV L A+ +G+ + +E+ + G P++
Sbjct: 186 GRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL 245
Query: 169 NTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
T+N++LD +GK G + K+ V++ M+ + T + V+ A R G L++ + F
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
++S +P VT +L++ +G AG + SVL+ ++ + D+V +N LV AY R
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
E GV+E+M ++G P+ +TY T++ AY G ++ A
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+R G Q K +K + + +L +Y + G +EK + E M++
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 200 SWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
S T+VTYN+++D FG+ G +++ + MRS+ +K T +++ A G +
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + TV +N L+ +G+ + E VL+ M++ C D VTY +V AY
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 319 STNGMKNHAKEFQDLVEKM 337
G +KE ++E M
Sbjct: 362 VRAGF---SKEAAGVIEMM 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 124/304 (40%), Gaps = 7/304 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHM---KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+L+ SG +++A L E + N+ + D I ++ + + LL
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ Q + Y T++ AY R + + +M P + T N L FG
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 147 GQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G+ + ++ +S G++ T + +L + + G + ++ Y VT
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN ++ FG+AG + + + M VT LV AY AG ++ V+ +
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+M + + + ++DAYG+ E + M++ GC P+ TY ++ S G K+
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL---SLLGKKS 435
Query: 326 HAKE 329
+ E
Sbjct: 436 RSNE 439
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 171/358 (47%), Gaps = 29/358 (8%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L+ +++ C ++T L+ AY +GL +KA ++L M+N P V Y+
Sbjct: 185 KEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVLIEMQNH-HVSPSVTVYNA 243
Query: 69 LIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLS 126
I+ +K ++ + M +P T TYN +I+ YG+A K + +L +M S
Sbjct: 244 YIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL-FCEMRS 302
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-----------------------AG 163
C+P++ T + AF G + E+ +E+ Q G
Sbjct: 303 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMG 362
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
+P ++NI++D+YG+AG AV E M++ + T+ ++ +++ A+ RA D+ + E
Sbjct: 363 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCE 422
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + M ++P L S++ YG G+ K+ +L ++N D +N L++ Y
Sbjct: 423 AIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 482
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
G+ ++ + +++R KPD VT+ + + AYS K + K + E +D C
Sbjct: 483 GKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRK--KLYVKCLEIFEEMIDSGC 538
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 30/288 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA-------------- 46
+ GK + + +LF M C N ++TAL++A+ R GL +KA
Sbjct: 283 LYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHID 342
Query: 47 ------------FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
FSL++HM C+PD +Y+I++ + +A +A+ +M GI
Sbjct: 343 SRAGYPYGAAEIFSLMQHM----GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 398
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
P ++ L+ AY RA+ + E + +M EPD + +N L +G GQ MEK
Sbjct: 399 APTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 458
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ ++ I+T+NIL++ YGKAG E++ + +++ ++ +VT+ I A+
Sbjct: 459 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYS 518
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
R + +F M P T L+ A + E++ SVLR
Sbjct: 519 RKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLR 566
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ + +N LIDAYG+ F E E V++L C P T ++A+ +G I+ E
Sbjct: 165 QPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEA 224
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGK-AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Q+ + PS+ +N ++ K G+ E+ V + M++ T TYN++I+ +
Sbjct: 225 VLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLY 284
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
G+A LF MRS + KP+ T +LV A+ G EK + + +
Sbjct: 285 GKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSR 344
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ YG + F+ +MQ GC+PD+ +Y MV AY G+ + A+
Sbjct: 345 AGY-----PYGAAEIFS-------LMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 387
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 36/224 (16%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ ++ AYGR+GL A ++ E MK P + ++
Sbjct: 348 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHM 406
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV---------------------------- 99
+L+ + +A K +A++ +MS G+ P+T
Sbjct: 407 LLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 466
Query: 100 -------TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
TYN LI+ YG+A +E V++ + +PDV T + A+
Sbjct: 467 PCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKC 526
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ +E+ +G P T +LL + E++++V+ M K
Sbjct: 527 LEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTMHK 570
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ S D + FN L+DAYG+ F E + + + + C P + TY +++AY G
Sbjct: 158 ILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAG 217
Query: 323 MKNHAK 328
+ A+
Sbjct: 218 LIEKAE 223
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 8/340 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPDC 59
G+ Q ++A L+ +++ ++ L+ AY +GL ++A +L M+N +P
Sbjct: 188 GQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPK- 246
Query: 60 QPDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEM 117
V Y+ I+ +K ++ + M +P T TYN +I+ YG+A K +
Sbjct: 247 TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSW 306
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+L +M S C+P++ T + AF G + E+ +E+ Q G++P + +N L++S
Sbjct: 307 KL-YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y +AG+ + + MQ +YNI++DA+GRAG E +F M+ I P+
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+ L+ AY A K ++++ + + + DT N +++ YGRL F +M+ +L
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
M+ C D TY ++ Y G +E F +L EK
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R G ++A + + MK C+P TY+++I KA L +M + +PN
Sbjct: 263 RKGNTEEAIDVFQRMKRD-RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
TY L++A+ R + + E ++ + EPDV+ N + ++ +G + +
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
Q G +P ++NI++D+YG+AG AV E M++ + T+ ++ +++ A+ +A D
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
+ + E + + M ++P L S++ YG G+ K+ +L ++N D +N
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
L++ YG+ ++ + ++++ +PD VT+ + + AYS K + K + E +D
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK--KLYVKCLEVFEEMID 559
Query: 339 ETC 341
C
Sbjct: 560 SGC 562
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 36/320 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + + +L+ M C N ++TAL++A+ R GL +KA + E ++ +
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLE 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ L++S +A + S M G P+ +YN ++DAYGRA + ++ E
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M P + + L A+ + + E ++ G++P N +L+ YG+
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F KM ++ M+ + I TYNI+I+ +G+AG L+++E LF ++ + +P VT
Sbjct: 474 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S + AY R K + + V E M
Sbjct: 534 WTS-----------------------------------RIGAYSRKKLYVKCLEVFEEMI 558
Query: 301 QRGCKPDKVTYRTMVRAYST 320
GC PD T + ++ A S+
Sbjct: 559 DSGCAPDGGTAKVLLSACSS 578
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ + ++G + + + AL+ +Y R+G A FSL++HM C+PD +
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM----GCEPDRAS 393
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A +A+ +M GI P ++ L+ AY +A+ + E + +M
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EPD + +N L +G GQ MEK + ++ I+T+NIL++ YGKAG E
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 513
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ + +++ ++ +VT+ I A+ R + +F M P T L+
Sbjct: 514 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 573
Query: 246 RAYGHAGKPEKLGSVLR 262
A + E++ SVLR
Sbjct: 574 SACSSEEQVEQVTSVLR 590
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ ++ AYGR+GL A ++ E MK P + ++
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHM 430
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + KA K +A++ +MS G+ P+T N++++ YGR F +ME L +M +
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C D+ T N + +G +G ++ +E+ + + + +P + T+ + +Y + + K
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 550
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
V E M + T +++ A ++Q+ + R M VT+ SLV
Sbjct: 551 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG------VTVSSLV 602
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ + +N LIDAYG+ + E E V++L P T ++A+ +G I+ E
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 155 CYEKFQSAGIQP---SINTFNILLDSYGK-AGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ Q+ + P + +N ++ K G+ E+ V + M++ T TYN++I
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ +G+A L+ MRS + KP+ T +LV A+ G EK + + +
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N L+++Y R + +MQ GC+PD+ +Y MV AY G+ + A+
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 11/304 (3%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-----CL-KAFA 78
A Q F A++ Y RSG FD LL+ M+ + +PD+ +++ LI + CL A
Sbjct: 61 ATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQ-ELEPDLVSFNTLINARAKSGCLAPGSA 119
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
FD LL ++ G+RP+ +TYNTLI A + + +M++ +C PD+WT N
Sbjct: 120 FD----LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNA 175
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ G G+ E+ + + G +P T+N LL ++ K G + + V E + +
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAG 235
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ +TYN +I +G+ G L L+ MR+ P VT L+ + G + G
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAG 295
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
VL + ++ + V F+ L+ AY + E M G KPD++ Y M+
Sbjct: 296 KVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDII 355
Query: 319 STNG 322
+ +G
Sbjct: 356 ARSG 359
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 6/335 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLF--DKAFSLLEHMKNTPDCQPDVNTY 66
+ +L AM + + + SF L++A +SG AF LL ++ +PDV TY
Sbjct: 80 DDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQV-GLRPDVITY 138
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +C + D A+ +M RP+ TYN ++ +GR + E +++
Sbjct: 139 NTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVE 198
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +PD T N L AF G DT+E+ E+ AG + T+N ++ YGK G +
Sbjct: 199 KGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDL 258
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ + VTY ++ID+ G+ + + M +KP+ VT +L+
Sbjct: 259 ALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALIC 318
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AY G+ E+ + S + D + + ++D R ++ + + M G +P
Sbjct: 319 AYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRP 378
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
D Y+ M+ A + N E + +V+ M+ C
Sbjct: 379 DNALYQVMLAALAKG---NEYDEIEAVVQDMEVVC 410
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 157/348 (45%), Gaps = 40/348 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F M+++G S ++ A G D+ + +++ +++ + +T +
Sbjct: 641 EHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDM-GFKISKSTVIL 699
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + KA +V + + M G PN Y ++I R K + ++EL +V+M
Sbjct: 700 MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAG 759
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL-------------- 174
EPD+ +N L + +G D + Y AG++P+ +T+N L
Sbjct: 760 FEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGF 819
Query: 175 --------------LDSY-------GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
L+SY GKA +E+ + E ++ Y Y++++ +
Sbjct: 820 TLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIY 879
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
A + + E L M+ + I+P+ T+ L+ +YG AG P++ VL + +S + + T
Sbjct: 880 RDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVST 939
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQR--GCKPDKVTYRTMVRAYS 319
+ ++ + +AY LK G+ ++++ + G KPD + +RA S
Sbjct: 940 LPYSTVFNAY--LKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAAS 985
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 153/403 (37%), Gaps = 78/403 (19%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSA-------------------------- 36
G+C + + A +F+ +V++G + ++ +LL A
Sbjct: 181 GRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDG 240
Query: 37 ---------YGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
YG+ G D A L + M+ C PD TY++LI S K +L
Sbjct: 241 ITYNTMIHMYGKMGRLDLALGLYDEMRAL-GCTPDAVTYTVLIDSLGKMDRISDAGKVLE 299
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M+ G++P VT++ LI AY + E T M++ +PD L SG
Sbjct: 300 EMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSG 359
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + Y+ + G +P + ++L + K ++++ AV++ M+ + +
Sbjct: 360 DMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSS 419
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF---- 263
I+I +A + Q L + + +P +L S++ AY GK E+ S+L+F
Sbjct: 420 ILI----KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREH 475
Query: 264 -------IDNSDIML---------------------------DTVFFNCLVDAYGRLKCF 289
I IML D + L+ + F
Sbjct: 476 VPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFF 535
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
E V MQ G +P + Y +M+ AY G A + D
Sbjct: 536 PEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMD 578
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 154/375 (41%), Gaps = 46/375 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + A ++ + M D G +F+AL+ AY + G ++A HM + +P
Sbjct: 285 LGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVAS-GVKP 343
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y +++ ++ K+ AL M G RP+ Y ++ A + + E+E +
Sbjct: 344 DRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIE-AV 402
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V+ + C+ + ++ L + I K +K G +P + +LD+Y
Sbjct: 403 VQDMEVVCQMNPQLVSSILI---KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETT 459
Query: 182 GHFEKMSAVMEY-----------------------------MQKY---------HYSWTI 203
G E+ +++++ MQ+Y +
Sbjct: 460 GKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDC 519
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
Y +I A + +F M+ I+PS S++ AY G PE ++
Sbjct: 520 NLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDE 579
Query: 264 IDNSDIMLDTVFFNC-LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
S I L+ + +++AYG++K + + ++ ++Q D+ + ++ AY+ +G
Sbjct: 580 AVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEP-SIDRRIWNALIHAYAESG 638
Query: 323 MKNHAKE-FQDLVEK 336
+ HA+ F ++EK
Sbjct: 639 LYEHARAVFDIMIEK 653
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 130/331 (39%), Gaps = 39/331 (11%)
Query: 8 PEKAHELFQAMVDEGCDANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE AH+L V G N S ++ AYG+ L+ A + ++ +K P +
Sbjct: 570 PETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRI--- 626
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+N LI AY + ++ M+
Sbjct: 627 ----------------------------------WNALIHAYAESGLYEHARAVFDIMIE 652
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P + ++N +RA G++D + ++ Q G + S +T ++LD++ KAG +
Sbjct: 653 KGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFE 712
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M++ Y + Y +I R + +E + M +P L +L+
Sbjct: 713 VMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLL 772
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y G +K V I + + + +N L+ Y R E +L M ++G P
Sbjct: 773 MYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTP 832
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+Y++++ A + A++ F+++ K
Sbjct: 833 KLESYKSLLAASGKAKLWEQAEQLFEEIRSK 863
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 145/374 (38%), Gaps = 74/374 (19%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLL----EHMKNT----PDCQ------------ 60
+G + +++S ++L AY +G ++ SLL EH+ ++ +C
Sbjct: 440 QGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAA 499
Query: 61 -----------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN- 102
D N Y LI +A F + + SDM GI P+ Y
Sbjct: 500 AMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYES 559
Query: 103 -----------------------------------TLIDAYGRAKMFAEMELTLVKMLSE 127
T+I+AYG+ K++ E VK L +
Sbjct: 560 MISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAE-NFVKGLKQ 618
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ D N + A+ SG + ++ G P+I++ N ++ + G +++
Sbjct: 619 EPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDEL 678
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+++ +Q + + T +++DAF +AGD+ ++ ++ M+ P+ S++
Sbjct: 679 YVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISL 738
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + ++ ++ + D N L+ Y F + V + + G +P+
Sbjct: 739 LCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPN 798
Query: 308 KVTYRTMVRAYSTN 321
+ TY T++ YS N
Sbjct: 799 EDTYNTLIVMYSRN 812
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M + +PE+ L M +G +S+ +LL+A G++ L+++A L E ++ + +
Sbjct: 808 MYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIR-SKGYR 866
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ + Y +L+K A K + LL+ M GI P T + L+ +YG A E E
Sbjct: 867 LNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKV 926
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L + S E + A+ +G + + ++ G++P
Sbjct: 927 LNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKP 972
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 6/345 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVN 64
+ E + L M + GC N S++ +L A + + +A LL+ M K C PDV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
YS +I K +L +M+ QG++P+ VTYN +IDA +A+ + EL L +M
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ +PD T +C + + G++ K + + + G+ P+I T N L S K G
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + M + I +Y ++ + G M LF M+S I +C L
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AY G + + + + D V ++ ++ + R+ + M RG
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGI 506
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+P+ Y ++++ + +G AKE LV +M + RPD
Sbjct: 507 QPNTAVYSSIIQGFCMHGGLVKAKE---LVSEMINK--GIPRPDI 546
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 167/390 (42%), Gaps = 74/390 (18%)
Query: 9 EKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
++A +L Q M +G C + +++ ++ + G KA SL M +PDV TY
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ-GVKPDVVTY 303
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFAEME- 118
+++I + KA A DK + +L M+T G +P+TVTY+ +I Y GR AKMF EM+
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK 363
Query: 119 -------LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQIDT 151
+T L+ C+ PD+++ L + + G
Sbjct: 364 RGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD 423
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
M + +S GI + + F IL+ +Y K G + + MQ+ S +VTY+ VI
Sbjct: 424 MIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG-HAG-----------------K 253
F R G L F M + I+P+ S+++ + H G +
Sbjct: 484 TFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPR 543
Query: 254 PE------------KLGSVLRFIDNSDIMLD------TVFFNCLVDAYGRLKCFAEMKGV 295
P+ K G V+ D D+ D + FN L+D Y + + +
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
L+ M+ G +PD VTY T++ Y NG N
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRIN 633
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 2/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF +M G AN FT L+ AY + G+ D A + M+ PDV TYS +I +
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ-GVSPDVVTYSTVISTF 485
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPD 132
+ + M +GI+PNT Y+++I + + + + +M+++ PD
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + + G++ ++ G +P + TFN L+D Y G +K +++
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ IVTYN ++D + + G + LFR M+ + +KP+ VT ++ AG
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S + + ++ R C E + + + K
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725
Query: 313 TMVRAYSTNGMKNHAKEF 330
TM+ A K AKE
Sbjct: 726 TMINAMYKVQRKEEAKEL 743
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 146/373 (39%), Gaps = 58/373 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRS---------------GLFDKAFSLLEHM 53
+ AH +F + + +S L+A R+ LF++ +
Sbjct: 91 DDAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNR---VCREE 147
Query: 54 KNTPDCQPDVNTYSILIKSCLKA-----------------FAFDKVQA------------ 84
T P TY+IL+ C +A D++ A
Sbjct: 148 AGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANR 207
Query: 85 -------LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED---CEPDVW 134
LL MS G PN V+Y+ ++ A M ++ L L++M+++ C PDV
Sbjct: 208 TEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSM-SQRALDLLQMMAKQGGACSPDVV 266
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
+ + F N G+ + + G++P + T+N+++D+ KA +K V+ M
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
VTY+ +I + G LK+ +FR M+ + P+ VT S + + G+
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ + D + L+ Y CFA+M G+ M+ G + + +
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446
Query: 315 VRAYSTNGMKNHA 327
+ AY+ GM + A
Sbjct: 447 IHAYAKRGMVDDA 459
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 124/306 (40%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E F MV G NT +++++ + G KA L+ M N +PD+ +S +I
Sbjct: 494 AMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVI 553
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + + G RP +T+N+LID Y + L M E
Sbjct: 554 NSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVE 613
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N L + +G+I+ + + Q G++P+ T+ I+L +AG
Sbjct: 614 PDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + T+ Y I++ R + LF+ + + +K S L +++ A
Sbjct: 674 FHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYK 733
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ E+ + I S ++ + + ++ + + + M++ G P
Sbjct: 734 VQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRL 793
Query: 311 YRTMVR 316
++R
Sbjct: 794 LNRIIR 799
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 77/208 (37%), Gaps = 1/208 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF+ M +G NT ++ +L+ R+G A M + V+ Y I++
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES-GTTVTVSIYGIILGGL 696
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D+ L + T ++ + NT+I+A + + E + + + P+
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + G ++ + + +GI P N ++ + G K +
Sbjct: 757 STYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSK 816
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ T ++++ F R G ++
Sbjct: 817 VDGKRILLEASTTSLMLSLFSRKGKYQE 844
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 144/290 (49%), Gaps = 3/290 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
Q D+ TY+ L+ +C + D+ + + M+ GI P+ TY+ L++ +G+ ++
Sbjct: 7 QADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSE 66
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M S PD+ + N L A SG I + + Q AG P+ T++ILL+ YG
Sbjct: 67 LLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYG 126
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G ++ + + M+ + TYNI+I+ FG G K++ LF M E ++P+
Sbjct: 127 RHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNME 186
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ A G G E +L ++ ++ + + +++AYG+ + E M
Sbjct: 187 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTM 246
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ G KP TY ++++ ++ G+ KE + ++ KM ++ +A R F
Sbjct: 247 NEVGSKPTVETYNSLIQMFAKGGLY---KESEAILLKMGQSGVARNRDTF 293
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F+ M + G + +++ L+ +G+ +K LL+ M++ PD+ +Y++
Sbjct: 27 DEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF-PDITSYNV 85
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ ++ + + + M G PN TY+ L++ YGR + ++ ++M +
Sbjct: 86 LLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSN 145
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+ T N + FG G + + ++P++ T+ L+ + GK G E
Sbjct: 146 TEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAK 205
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ +M + + Y VI+A+G+A ++ F M KP+ T SL++ +
Sbjct: 206 KILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMF 265
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ ++L + S + + FN +++A+ + F E M++ C PD+
Sbjct: 266 AKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDE 325
Query: 309 VTYRTMVRAYSTNGMKNHAKE 329
T ++ Y G+ ++E
Sbjct: 326 QTLEAVLSVYCFAGLVEESEE 346
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 20/360 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + EK EL + M G + S+ LL A+ +SG +A + M+ C P
Sbjct: 55 FGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGA-GCVP 113
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSIL+ + +D V+ L +M PN TYN LI+ +G F E+
Sbjct: 114 NAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF 173
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ E+ EP++ T + A G G + +K G+ PS + ++++YG+A
Sbjct: 174 HDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 233
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+E+ M + T+ TYN +I F + G K+ E + M + + T
Sbjct: 234 ALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF 293
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ A+ G+ E+ ++ + D ++ Y CFA G++E ++
Sbjct: 294 NGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVY----CFA---GLVEESEE 346
Query: 302 R-------GCKPDKVTYRTMVRAYSTNGMKNHAKE-----FQDLVEKMDETCLAMKRPDF 349
+ G P + Y M+ Y+ + A + F + V + + M R D+
Sbjct: 347 QFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDY 406
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 22/338 (6%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ + + +LF M + N ++ L++ +G G F + +L M + +
Sbjct: 124 LYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVE-ENVE 182
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY LI +C K + + +L M+ +G+ P++ Y +I+AYG+A ++ E +
Sbjct: 183 PNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVA 242
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +P V T N ++ F G E K +G+ + +TFN +++++ +
Sbjct: 243 FNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQ 302
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE+ M+K T V+ + AG +++ E F +++ I PS +
Sbjct: 303 GGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMC 362
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRL--------KCF 289
C ++ Y A + D++ +LD +F N + + + G++ +
Sbjct: 363 YCMMLAVYAKADR----------WDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNW 412
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ V E ++ GC Y T++ A G K A
Sbjct: 413 QMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERA 450
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M E + D+ T N L A G D E + GI P I T++ L++++GK
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
EK+S +++ M+ I +YN++++A ++G +K+ +FR M+ P+ T
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ YG G+ + + + + S+ + +N L++ +G F E+ + M +
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+P+ TY ++ A G+ AK+
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKI 207
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 8/340 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPDC 59
G+ Q ++A L+ +++ ++ L+ AY +GL ++A +L M+N +P
Sbjct: 166 GQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKT 225
Query: 60 QPDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEM 117
V Y+ I+ +K ++ + M +P T TYN +I+ YG+A K +
Sbjct: 226 -IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSW 284
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+L +M S C+P++ T + AF G + E+ +E+ Q G++P + +N L++S
Sbjct: 285 KL-YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y +AG+ + + MQ +YNI++DA+GRAG E +F M+ I P+
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+ L+ AY A K ++++ + + + DT N +++ YGRL F +M+ +L
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
M+ C D TY ++ Y G +E F +L EK
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R G ++A + + MK C+P TY+++I KA L +M + +PN
Sbjct: 241 RKGNTEEAIDVFQRMKRD-RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
TY L++A+ R + + E ++ + EPDV+ N + ++ +G + +
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
Q G +P ++NI++D+YG+AG AV E M++ + T+ ++ +++ A+ +A D
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
+ + E + + M ++P L S++ YG G+ K+ +L ++N D +N
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
L++ YG+ ++ + ++++ +PD VT+ + + AYS K + K + E +D
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK--KLYVKCLEVFEEMID 537
Query: 339 ETC 341
C
Sbjct: 538 SGC 540
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 36/320 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + + +L+ M C N ++TAL++A+ R GL +KA + E ++ +
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLE 331
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ L++S +A + S M G P+ +YN ++DAYGRA + ++ E
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M P + + L A+ + + E ++ G++P N +L+ YG+
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F KM ++ M+ + I TYNI+I+ +G+AG L+++E LF ++ + +P VT
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 511
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S + AY R K + + V E M
Sbjct: 512 WTS-----------------------------------RIGAYSRKKLYVKCLEVFEEMI 536
Query: 301 QRGCKPDKVTYRTMVRAYST 320
GC PD T + ++ A S+
Sbjct: 537 DSGCAPDGGTAKVLLSACSS 556
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ + ++G + + + AL+ +Y R+G A FSL++HM C+PD +
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM----GCEPDRAS 371
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A +A+ +M GI P ++ L+ AY +A+ + E + +M
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EPD + +N L +G GQ MEK + ++ I+T+NIL++ YGKAG E
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ + +++ ++ +VT+ I A+ R + +F M P T L+
Sbjct: 492 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
Query: 246 RAYGHAGKPEKLGSVLR 262
A + E++ SVLR
Sbjct: 552 SACSSEEQVEQVTSVLR 568
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ ++ AYGR+GL A ++ E MK P + ++
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHM 408
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + KA K +A++ +MS G+ P+T N++++ YGR F +ME L +M +
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C D+ T N + +G +G ++ +E+ + + + +P + T+ + +Y + + K
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 528
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
V E M + T +++ A ++Q+ + R M VT+ SLV
Sbjct: 529 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH------KGVTVSSLV 580
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ + +N LIDAYG+ + E E V++L P T ++A+ +G I+ E
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 155 CYEKFQSAGIQP---SINTFNILLDSYGK-AGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ Q+ + P + +N ++ K G+ E+ V + M++ T TYN++I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ +G+A L+ MRS + KP+ T +LV A+ G EK + + +
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N L+++Y R + +MQ GC+PD+ +Y MV AY G+ + A+
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 10/346 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +Q + L + D G N ++ L+ AY R+GL D+ +L + M++ D +P+
Sbjct: 331 GQLQQIDTVKTLLR---DTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDC-DIRPN 386
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ +I + K LL +M G+ P+ YN +I+ +GR + + +
Sbjct: 387 TYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFF 446
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM EPDV + N + A +GQ K Y K + G P+ TFNI++ G+
Sbjct: 447 KMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHK 506
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ ++E M+ +VTY ++D + +A + + M+ + + PS
Sbjct: 507 RWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYS 566
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L AY G E+ VL+ ++ +I ++ N L++A+ E V E +++
Sbjct: 567 ALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEA 626
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G DK+TY T+++A A++ ++ DE A RPD
Sbjct: 627 GLTADKITYTTLMKALI------RAEKLDEVSGVFDEMIKAGCRPD 666
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 154/323 (47%), Gaps = 4/323 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
K H+ + G + + + AL+ AY ++ + KA L MK T PDV +Y+ +
Sbjct: 159 KLHKALEVAEKLGSNLQRRGYNALVGAYAQNRDYGKALETLSKMK-TLGFPPDVVSYTHV 217
Query: 70 IKSCLKAFAFDKVQA--LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
I++C + D L +M +G++ + YN LI A G+A E L K+ +
Sbjct: 218 IQAC-RHGVVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQAS 276
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
D + + + G G+ E E+ + G++P++ +N LL Y + G +++
Sbjct: 277 GLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQI 336
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V ++ S +TY ++IDA+ RAG + ++E L++ MR I+P+ ++
Sbjct: 337 DTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITI 396
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y G+ +K +LR + + + D +N +++ +GR + + + MQ G +PD
Sbjct: 397 YRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPD 456
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
V++ +++ A G A++
Sbjct: 457 VVSWNSLIDACCKAGQPLEARKL 479
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 155/343 (45%), Gaps = 2/343 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +P + + + G A+ S+ +L+ + G+ G +A +LLE MK +P+
Sbjct: 258 GQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMK-WYGLRPN 316
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ Y+ L+ + ++ + + + G+ N +TY LIDAY RA + +E
Sbjct: 317 LKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQ 376
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M D P+ + + + ++GQ K + Q AG+ P + +N++++++G+
Sbjct: 377 EMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTR 436
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ MQ +V++N +IDA +AG + L+ M ++ P+ T
Sbjct: 437 QLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFN 496
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + + ++ + + + + V + LVD Y + + F + L+ M++
Sbjct: 497 IVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKED 556
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD-ETCLAM 344
G P Y + AY+ GM +EK + E LAM
Sbjct: 557 GMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAM 599
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 159/376 (42%), Gaps = 50/376 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFD--KAFSLLEHMKNTPDCQPDVNTYS 67
KA E M G + S+T ++ A R G+ D F L + M+ Q D Y+
Sbjct: 194 KALETLSKMKTLGFPPDVVSYTHVIQAC-RHGVVDIYTGFRLFQEMQ-AEGVQVDGKVYN 251
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C +A ++ L + G+ + +Y +L+ + G+ AE E L +M
Sbjct: 252 DLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWY 311
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P++ N L + GQ+ ++ + G+ + T+ +L+D+Y +AG +++
Sbjct: 312 GLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRL 371
Query: 188 SAVMEYMQK-------YHYSWTIV----------------------------TYNIVIDA 212
A+ + M+ Y Y+ I YN++I+
Sbjct: 372 EALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINT 431
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
FGR L+Q F M+ I+P V+ SL+ A AG+P + + + N
Sbjct: 432 FGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPT 491
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
FN ++ G K + ++ ++E M+ +G P+ VTY T+V Y+ A+ FQD
Sbjct: 492 AQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYA------QARLFQD 545
Query: 333 LVEKMDETCLAMKRPD 348
VE CL + D
Sbjct: 546 AVE-----CLQTMKED 556
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C E+ + Q M E + N L++A+ +G +AF++ E++K
Sbjct: 575 LGMC---EQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEA-GLTA 630
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D TY+ L+K+ ++A D+V + +M G RP+ + L A+ F E EL+
Sbjct: 631 DKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDMLRSAF----RFKERELS 685
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 7/349 (2%)
Query: 1 MLGKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK+ +KA +L + M NT ++ ++ A+ + G+ D A SLL MK
Sbjct: 185 MNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQK-S 243
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TYS LI + K ++ V+ L +M I PN T+N++ID + + E
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ M+ + +PDV T N + +G GQ+D + ++ + I+P+I ++NIL++ Y
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++ V + + +IVT N+++ G K + F M S P
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T C+L+ Y G E+ S ++ + + ++D + + E
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETCLAMKR 346
+ G PD +TY M+ Y G+ + AK D++ KM D CLA R
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAK---DMLRKMEDNGCLADNR 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 1/321 (0%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
+G N F LL A L + + C+P+ Y ++ K
Sbjct: 136 KGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K LL M +PNT Y+ +IDA+ + M L +M + PD++T + +
Sbjct: 196 KAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
A Q + + + + I P++ TFN ++D K G E +M YM +
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
++TYN++ID +G G + + +F M ++ I+P+ ++ L+ Y K ++ V
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
R I + V N L+ L + + M G PD T+ T++ Y
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435
Query: 321 NGMKNHA-KEFQDLVEKMDET 340
NG+ A F L + ++T
Sbjct: 436 NGLVEEAMSHFHKLERRREDT 456
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 1/296 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q E LF M+ N +F +++ + G + A ++ +M P
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK-GVDP 316
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+++I D+ + + M + I PN ++YN LI+ Y R K E
Sbjct: 317 DVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVC 376
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ + +P + T N L G+ + + +++ SAG P + T LL Y K
Sbjct: 377 REISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKN 436
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ + +++ I Y VID + G L + F + + P +T
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+++ Y G ++ +LR ++++ + D +N +V + R +EMK LE
Sbjct: 497 TAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLE 552
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 3/281 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A E+ + M+++G D + ++ ++ YG G D+A + + M N +
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK-SIE 350
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ +Y+ILI + D+ + ++S +G++P+ VT N L+ +
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+MLS PD++T L + +G ++ + K + +I + ++D K
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +K A E + ++TY +I + + G L + + + R M T
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR + + K ++ + L I + L+D
Sbjct: 531 YNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 6/314 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY-- 66
+ A LF+ MV + SF+ LL A + SL + + V+ +
Sbjct: 54 DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKL---RIPVHEFIL 110
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
SI++ SC D ++L+ +GI N V +NTL+ + K++
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E+ CEP+ + G + +P+ ++I++D++ K G +
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++++ M++ I TY+ +IDA + + + LF M I P+ T S++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
GK E ++R++ + D + +N ++D YG + + + M + +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 306 PDKVTYRTMVRAYS 319
P+ ++Y ++ Y+
Sbjct: 351 PNIISYNILINGYA 364
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K A F M+ G + + LL Y ++GL ++A S ++ +
Sbjct: 401 LGRTKS---AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE-DT 456
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ +I K DK A + G+ P+ +TY +I Y + + E + L
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM C D T N +R F S ++ M+ E+ T +L+D
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 34/250 (13%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL----------------- 49
Q ++A E+F +M+++ + N S+ L++ Y R D+A +
Sbjct: 333 QVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392
Query: 50 -----LEHMKNTPDCQ------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L + T Q PD+ T+ L+ K ++ + + +
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
N Y +ID + + T K+ PDV T + + G +D
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ K + G T+N+++ + ++ +M A +E + +S+ T +++D
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572
Query: 213 FGRAGDLKQM 222
L M
Sbjct: 573 IAEDPSLLNM 582
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 35/353 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---- 57
LGK +P+ A F A + G + +AL+SAY RSGL ++A +LE MK
Sbjct: 208 LGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPT 267
Query: 58 ----------------DCQ---------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D + PD T++ L+ +C +A + +AL
Sbjct: 268 TVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALF 327
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+M GI + TYNT IDA + L+ M +++ +P+V T + + +
Sbjct: 328 DEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKL 387
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ D K YEK +S GIQ +N +L Y KAG + +++ V + M+ VTY
Sbjct: 388 EKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTY 447
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I+ +G+ G L + +L + MR + PS +T +L+ Y AG +V
Sbjct: 448 NSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKE 507
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
S + D V F+ +D + +L M + G KP+ VTY T++ A+
Sbjct: 508 SGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFG 560
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC E A ++ M + N +++ L+ Y + +D+A L E MK+ Q D
Sbjct: 351 KCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSL-GIQLDR 409
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ ++ +KA + ++ + +M GI +TVTYN+LI+ YG+ + +
Sbjct: 410 VCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQD 469
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M P V T + + + +G Y F+ +G++P + F+ +D+ K G
Sbjct: 470 MRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGL 529
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
E +++ M + +VTYN +IDAFG++ L +
Sbjct: 530 VEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + L Q M G + +++ L+ Y ++G+ AF++ K + +PD
Sbjct: 455 GKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKES-GLKPD 513
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM----- 117
V +S I + K + +LL+DM+ GI+PN VTYNT+IDA+G++K+ +E
Sbjct: 514 VVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAG 573
Query: 118 ELTLVKM----LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
E+ +V + + P + S ++ + + ++K G++P++ TF+
Sbjct: 574 EMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSA 633
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+L++ + +FE + ++E ++ + V Y +++
Sbjct: 634 ILNACSRCNNFEDAALLLEQLRLFDNFVYGVAYGLLM 670
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
ELFQ MV +G N +F+A+L+A R F+ A LLE ++ + V Y +L+
Sbjct: 614 ELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNFVYGV-AYGLLMG- 671
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ + Q+L + + ++ YN L D +L +++ ++ +
Sbjct: 672 --YQEIWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQLVVLEGVNRRVWDN 729
Query: 133 VWTMNC 138
W+ C
Sbjct: 730 TWSEFC 735
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 6/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDCQPDVNTYS 67
K EL M GC+ + SF L++A +SG + + A LL ++ + QPD+ TY+
Sbjct: 240 KVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRS-GIQPDIITYN 298
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + ++ + +DM +P+ TYN +I YGR M E + S+
Sbjct: 299 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 358
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF G +D +++ E G T+N ++ YGK G +
Sbjct: 359 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 418
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ S VTY ++ID+ G+A +K+ + M + R+KP+ T +L+
Sbjct: 419 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICG 478
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGK + + S I D + ++ ++D R + + + M KPD
Sbjct: 479 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 538
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+R G +N ++ +V+ M+E C
Sbjct: 539 HALYEVMLRVL---GKENREEDVHKVVKDMEELC 569
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 154/335 (45%), Gaps = 19/335 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +++ MV C + ++ A++S YGR G+ +A L + ++ + PD TY+
Sbjct: 311 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLE-SKGFLPDAVTYNS 369
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTL 121
L+ + + DKV+ + DM G + +TYNT+I YG+ +++++M+L+
Sbjct: 370 LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS- 428
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
PD T + + G + I + + +A ++P++ TF+ L+ Y KA
Sbjct: 429 ------GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKA 482
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M + + Y++++D R + + L++ M KP
Sbjct: 483 GKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALY 542
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++R G + E + V++ ++ M V + LV +CF +L +
Sbjct: 543 EVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKG----ECFDHAANMLRLAIS 598
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+GC+ D+ +++ +Y ++G A+E D + +
Sbjct: 599 QGCELDRENLLSILGSYGSSGRHLEARELLDFLRE 633
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 157/336 (46%), Gaps = 4/336 (1%)
Query: 5 CKQPE---KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
C++ E +A ++F M G + + + +++ Y + G + A L++ +
Sbjct: 686 CEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFD 745
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV+ ++ +I++ K + K ++L+ + + + +N LI AY + +
Sbjct: 746 DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIF 805
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + P V ++N ++A G++D + ++ Q G + S ++ ++LD++ A
Sbjct: 806 NTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHA 865
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ + + M+ Y T+ Y I+I + ++ +E + M R KP
Sbjct: 866 GNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIW 925
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+++ Y G +K G V + I + + D +N L+ Y R + E ++ M++
Sbjct: 926 NSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRR 985
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G +P TY++++ A+ M A+E F+ L+ K
Sbjct: 986 VGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1021
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 156/325 (48%), Gaps = 10/325 (3%)
Query: 8 PEKAHELFQAMVDEGCDANTQSF-TALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPDVNT 65
PE AH L ++G + S T ++ AYG+ L+ KA SL+ ++ C D
Sbjct: 727 PETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQK--CTMVDRKV 784
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ LI + + +++ +A+ + M G P + N L+ A E+ + + ++
Sbjct: 785 WNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQ 844
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ ++ L AF ++G I ++K Y+ ++AG P+++ + I++ K
Sbjct: 845 DMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVR 904
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ A++ M+ + + +N V+ + GD K+ +++L++ +KP T +L+
Sbjct: 905 DVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLI 964
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDI--MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
Y +PE+ S++ + + LDT + L+ A+G+L+ + + + E + +
Sbjct: 965 LMYCRDRRPEEGLSLMHEMRRVGLEPKLDT--YKSLISAFGKLQMVEQAEELFEGLLSKE 1022
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAK 328
CK D+ Y M++ + +G NH+K
Sbjct: 1023 CKLDRSFYHIMMKMFRNSG--NHSK 1045
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 158/373 (42%), Gaps = 51/373 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F M+ +G S L+ A G D+ + +++ ++ D ++ SI
Sbjct: 799 ERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQ---DMGFKISKSSI 855
Query: 69 LIKSCLKAFAFD----KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ L AFA +V+ + M G P Y +I + K ++E + +M
Sbjct: 856 TL--MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM 913
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+PD+ N L+ + G + Y+ Q AG++P +T+N L+ Y +
Sbjct: 914 EVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRP 973
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR----------------- 227
E+ ++M M++ + TY +I AFG+ ++Q E LF
Sbjct: 974 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1033
Query: 228 ------------------LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+M+ ++P+ T+ L+ +Y +G+PE+ VL + +
Sbjct: 1034 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1093
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR--GCKPDKVTYRTMVRAYSTNGMKNHA 327
L T+ ++ ++DAY LK + ++M+ + G +PD + VRA S + H
Sbjct: 1094 PLSTLPYSSVIDAY--LKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAAS---LSQHT 1148
Query: 328 KEFQDLVEKMDET 340
E L++ + +T
Sbjct: 1149 SEAIVLLKALRDT 1161
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ + M + + ++L Y G F K + + ++ +
Sbjct: 896 LLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA-GLK 954
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +TY+ LI + ++ +L+ +M G+ P TY +LI A+G+ +M + E
Sbjct: 955 PDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEEL 1014
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+LS++C+ D + ++ F NSG EK + AG++P+I T ++L+ SY
Sbjct: 1015 FEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSG 1074
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ V++ ++ + + Y+ VIDA+ + GD M+ + ++P
Sbjct: 1075 SGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRI 1134
Query: 241 LCSLVRA 247
VRA
Sbjct: 1135 WTCFVRA 1141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 150/364 (41%), Gaps = 42/364 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK ++A E+ M++ ++F+AL+ Y ++G +A + M + +P
Sbjct: 444 LGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRS-GIKP 502
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS+++ L+ K L +M +P+ Y ++ G+ ++ +
Sbjct: 503 DHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVH-KV 561
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
VK + E C + + C++ G D S G + +L SYG +
Sbjct: 562 VKDMEELCGMNSQVI-CSILVKGEC--FDHAANMLRLAISQGCELDRENLLSILGSYGSS 618
Query: 182 GHFEKMSAVMEYMQKYHY-SWTIVTYNIVI---------DA---FGRAGD---------- 218
G + ++++++++ S ++ ++I DA +G+A D
Sbjct: 619 GRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTM 678
Query: 219 -------------LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ +F MR ++PS S+V Y G PE ++ +
Sbjct: 679 YESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAE 738
Query: 266 NSDIMLDTVFFNC-LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ D V + +++AYG+LK + + + ++ ++Q+ D+ + ++ AY+ +G
Sbjct: 739 EKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCY 798
Query: 325 NHAK 328
A+
Sbjct: 799 ERAR 802
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ +L GKA E ++ + + T+ YN ++ + R G +++ L
Sbjct: 186 PNARMLATILSVLGKANQ-EALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQEL 244
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGK--PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
LMRS +P V+ +L+ A +G +L + S I D + +N L+ A
Sbjct: 245 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 304
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
R E V M C+PD TY M+ Y GM A + F+DL K
Sbjct: 305 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 358
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 156/333 (46%), Gaps = 19/333 (5%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+Q E+A EL M+ C + +F ++++ + GL D+A ++E M C PD+ T
Sbjct: 475 EQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN-GCSPDIVT 533
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I D LLSD+ + G +P+ VT+NTL+ + + E + M+
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C PD T N + + G + + + G P+ +T++I++D+ KAG
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG--- 650
Query: 186 KMSAVMEYMQKY-HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
K A +E + + + ++TYN VI +AG +++ L R+M S + P T SL
Sbjct: 651 KAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSL 710
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEMKGVLE 297
++ +LR + ++ + DT F+N ++ + R + CFA
Sbjct: 711 AYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAH------ 764
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M GC PD+ TY ++ A + G+ + AK
Sbjct: 765 -MVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 1/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F M+ GC + +++ LL A + + +A +LL+ M+ C+PD+ TY++LI
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR-AKGCEPDIVTYNVLI 328
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ D+ +LS++ + G +P+ VTY ++ + ++ + E+E L +M S +C
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + + G +D + + G I T++ +LD G + +
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ ++ Y + Y V+ ++ E L M P VT ++V +
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ V+ + + D V +NC++D C + +L +Q GCKPD VT
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 311 YRTMVRA 317
+ T+++
Sbjct: 569 FNTLLKG 575
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 5/307 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+ M + GC A+ +++++L G D A LL +K+ C+PD Y+
Sbjct: 408 DRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY-GCKPDTIAYTT 466
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K +++ + L+++M P+ VT+NT++ + + K + + +V+ +SE+
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ-KGLVDRAIRVVEQMSEN 525
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C PD+ T NC + N ID + QS G +P I TFN LL +E
Sbjct: 526 GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDA 585
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+M M + + +T+N VI + + G L Q ++M P+ T +V A
Sbjct: 586 EQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDA 645
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AGK + +L + N D + +N ++ + E +L VM G PD
Sbjct: 646 LLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPD 703
Query: 308 KVTYRTM 314
TYR++
Sbjct: 704 TTTYRSL 710
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 38/357 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M +GC+ + ++ L++A G D+A ++L ++ + C+PD TY+ +
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSH-GCKPDAVTYTPV 362
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-D 128
+KS + + +V+ LL++M++ P+ VT+NT++ + + + + + +V +SE
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLV-DRAIEVVDHMSEHG 421
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI-------------------- 168
C D+ T + L + G++D + + +S G +P
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481
Query: 169 ---------------NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
TFN ++ S + G ++ V+E M + S IVTYN +ID
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ L ++S KP VT +L++ + E ++ + S+ D
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ FN ++ + + + L++M + GC P+ TY +V A G A E
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALEL 658
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 44/356 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F A+ G A ++ +++ Y R+G + A L+ M PD T++ LI
Sbjct: 206 AERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF----PPDTFTFNPLI 258
Query: 71 KS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++ C++ D + A+ DM +G P+ VTY+ L+DA + + + L +M ++ C
Sbjct: 259 RALCVRGRIPDAL-AVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGC 317
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP----------------------- 166
EPD+ T N + A N G +D S G +P
Sbjct: 318 EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEE 377
Query: 167 ------SIN------TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
S N TFN ++ S + G ++ V+++M ++ IVTY+ ++D
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
G + L ++S KP + ++++ + E+ ++ + SD D V
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
FN +V + + V+E M + GC PD VTY ++ + A E
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C++ ++A + + + D G +T + +L + R D A HM ++ C
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS-GCM 771
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
PD +TY IL+++ D+ + LL+ + + G+
Sbjct: 772 PDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 6/267 (2%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL-LSDMSTQGIRPNTVTY 101
D A HMK + P + TY++L ++C +A DK +AL L + + ++P+ T+
Sbjct: 151 LDSALDHFGHMKTSVHSCPSLATYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYTF 210
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
N ++DAY + ++ +ME L +M PD+ T N + A+G +G ME+ Y+ +
Sbjct: 211 NGIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVN 270
Query: 162 -AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+G +PS TFN +L SYG++ KM V+ M + T+N ++ ++GRAG+L
Sbjct: 271 LSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELD 330
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS--DIMLDTVFFNC 278
M F M +KP TL L+RAY G ++ ++ FI+ S DI +
Sbjct: 331 TMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEAL--FINASKLDIKPAVSSYLI 388
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCK 305
L AYG + +M ++ M+Q G +
Sbjct: 389 LFKAYGEERQLDKMTVLMSKMEQSGVE 415
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L A ++GL DKA +L + D +PD T++ ++ + K + ++ L +
Sbjct: 173 TYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKE 232
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNCTLRAFGNSG 147
MS G+RP+ VT+N LIDAYGRA F +ME T +++ C+P T N L ++G S
Sbjct: 233 MSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSR 292
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ ME+ + AG+ P + TFN L+ SYG+AG + M + M + + T +
Sbjct: 293 ELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLD 352
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++ A+ G + + E LF IKP+ + L +AYG + +K+ ++ ++ S
Sbjct: 353 VLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQS 412
Query: 268 DIMLDTVFFNCLVDAYG 284
+ F +++Y
Sbjct: 413 GVESGQEFLLQALESYA 429
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
+ M + G + +F L+ AYGR+G F K + + N C+P T++ ++ S
Sbjct: 230 LKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYG 289
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
++ K++ +L M G+ P+ T+NTL+ +YGRA M KM+ +P V
Sbjct: 290 QSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVS 349
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T++ LRA+ G +D E + I+P+++++ IL +YG+ +KM+ +M M
Sbjct: 350 TLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKM 409
Query: 195 QK 196
++
Sbjct: 410 EQ 411
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++ K ++ M G + +F L+S+YGR+G D + M +P +P
Sbjct: 289 GQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSP-VKPQ 347
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V+T +L+++ + D+ +AL + S I+P +Y L AYG + +M + +
Sbjct: 348 VSTLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMS 407
Query: 123 KMLSEDCE 130
KM E
Sbjct: 408 KMEQSGVE 415
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 6/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDCQPDVNTYS 67
K EL M GC+ + SF L++A +SG + + A LL ++ + QPD+ TY+
Sbjct: 215 KVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRS-GIQPDIITYN 273
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI +C + ++ + +DM +P+ TYN +I YGR M E + S+
Sbjct: 274 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 333
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF G +D +++ E G T+N ++ YGK G +
Sbjct: 334 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 393
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ S VTY ++ID+ G+A +K+ + M + R+KP+ T +L+
Sbjct: 394 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICG 453
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AGK + + S I D + ++ ++D R + + + M KPD
Sbjct: 454 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 513
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+R G +N ++ +V+ M+E C
Sbjct: 514 HALYEVMLRVL---GKENREEDVHKVVKDMEELC 544
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 25/332 (7%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C +A LF+ + +G + ++ +LL A+ R G DK + E M D
Sbjct: 315 GRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM-GFGKD 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I K D L SDM G P+ VTY LID+ G+A M E +
Sbjct: 374 EMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML+ +P + T + + + +G+ E+ ++ +GI+P ++++LD +
Sbjct: 434 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K + + M + + Y +++ G+ + + + + M E + +C
Sbjct: 494 ESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME-ELCGMNSQVIC 552
Query: 243 SLV---RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
S++ + HA ++LR + C +D YG+ + F G E+
Sbjct: 553 SILVKGECFDHA------ANMLRL---------AISQGCELDQYGKARDFGLFCGTEELF 597
Query: 300 Q---QRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + CK D+ Y M++ + +G NH+K
Sbjct: 598 EGLLSKECKLDRSFYHIMMKMFRNSG--NHSK 627
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 159/394 (40%), Gaps = 68/394 (17%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K E+ + MV G + ++ ++ YG+ G D AF L MK + PD TY++
Sbjct: 356 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGR-SPDAVTYTV 414
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL------- 121
LI S KA + ++S+M ++P T++ LI Y +A E E T
Sbjct: 415 LIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSG 474
Query: 122 ----------------------------VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+M+ +PD LR G + + +
Sbjct: 475 IKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVH 534
Query: 154 KCYEKFQS-AGIQPSI------------NTFNIL---------LDSYGKA---GHFEKMS 188
K + + G+ + + N+L LD YGKA G F
Sbjct: 535 KVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTE 594
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E + Y+I++ F +G+ + E L +M+ ++P+ T+ L+ +Y
Sbjct: 595 ELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSY 654
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR--GCKP 306
+G+PE+ VL + + L T+ ++ ++DAY LK + ++M+ + G +P
Sbjct: 655 SGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAY--LKNGDHNVAIQKLMEMKKDGLEP 712
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
D + VRA S + H E L++ + +T
Sbjct: 713 DHRIWTCFVRAAS---LSQHTSEAIVLLKALRDT 743
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ +L GKA E ++ + + T+ YN ++ + R G +++ L
Sbjct: 161 PNARMLATILSVLGKANQ-EALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQEL 219
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGK--PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
LMRS +P V+ +L+ A +G +L + S I D + +N L+ A
Sbjct: 220 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 279
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
R E V M C+PD TY M+ Y GM A + F+DL K
Sbjct: 280 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 333
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 162/314 (51%), Gaps = 2/314 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ ++ E+F+ M ++G + F L+ ++ GL ++A + M+ + +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK-GIRSNTIV 381
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ L+ + K+ ++V+ L ++M +G++P+ TYN L+DAY R +E L +M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
EP+V + C + A+G + ++ M + + + G++PS +++ L+ +Y +G
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
EK A E M K ++ TY V+DAF R+GD ++ +++LM E+IK + +T +L
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G + V+ + + +N L++AY R A++ +L+ M
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Query: 305 KPDKVTYRTMVRAY 318
KPD +TY TM+ A+
Sbjct: 622 KPDSITYSTMIYAF 635
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M +G +NT + L+ AY +S ++ L M++ +P TY+I
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK-GLKPSAATYNI 419
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSE 127
L+ + + D V+ LL +M G+ PN +Y LI AYGR K ++M ++M
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P + + A+ SG + +E+ GI+PS+ T+ +LD++ ++G K+
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M + T +TYN ++D F + G + + ++PS +T L+ A
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y G+ KL +L+ + ++ D++ ++ ++ A+ R++ F ++M + G PD
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 308 KVTYRTM 314
+Y +
Sbjct: 660 PRSYEKL 666
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 151/323 (46%), Gaps = 3/323 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQ 60
L ++ + A E+++AM + + L++ ++G K + + E M +
Sbjct: 283 LSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEK-GVK 341
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ + L+KS ++ + ++M +GIR NT+ YNTL+DAY ++ E+E
Sbjct: 342 WSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGL 401
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + +P T N + A+ Q D +E + + G++P++ ++ L+ +YG+
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Query: 181 AGHFEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
M+A M+K + +Y +I A+ +G ++ F M E IKPS
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T S++ A+ +G KL + + + I + +N L+D + + + E + V+
Sbjct: 522 TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ G +P +TY ++ AY+ G
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGG 604
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QP+ L + M D G + N +S+T L+SAYGR+ + D A MK +P ++
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV-GLKPSSHS 487
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K A +M +GI+P+ TY +++DA+ R+ ++ ML
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E + T N L F G +F G+QPS+ T+N+L+++Y + G
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K+ +++ M + +TY+ +I AF R D K+ + ++M
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 153/339 (45%), Gaps = 3/339 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + + L + D+ + + + A +S S +D A+ + E M +
Sbjct: 247 LLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKI-NVY 305
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD T +ILI + KA + +V + MS +G++ + + L+ ++ + E +
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + + N + A+ S I+ +E + + + G++PS T+NIL+D+Y
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-LFRLMRSERIKPSC 238
+ + + ++ M+ + +Y +I A+GR + M F M+ +KPS
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ +L+ AY +G EK + + I + ++DA+ R ++ + ++
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M + K ++TY T++ ++ G+ A++ KM
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 45/298 (15%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +KSCL + + +Q + S R +V + L GR +M + L L +
Sbjct: 215 SGFVKSCLYFYEWMSLQ----EPSLASPRACSVLFTLL----GRERMADYILLLLSNLPD 266
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH--- 183
++ DV N + S + D + YE + P T IL+ + KAG
Sbjct: 267 KEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAK 326
Query: 184 -----FEKMS----------------------------AVMEYMQKYHYSWTIVTYNIVI 210
FEKMS + M+K + YN ++
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
DA+ ++ ++++E LF MR + +KPS T L+ AY +P+ + ++LR +++ +
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKG-VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + CL+ AYGR K ++M M++ G KP +Y ++ AYS +G A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKA 504
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 162/336 (48%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + A +F+ G +F+AL+SAYGRSGL ++A S+ MK +P
Sbjct: 243 LGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY-GLRP 301
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F +V +M ++P+ +T+N+L+ R ++
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + E DV++ N L A GQ+D + + + I P++ +++ ++D + K
Sbjct: 362 FDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAK 421
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG F++ + M+ + + V+YN ++ + + G ++ + R M S IK VT
Sbjct: 422 AGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG GK +++ V + ++ + + ++ L+D Y + + E V +
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK 541
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G + D V Y ++ A NG+ A D + K
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 148/332 (44%), Gaps = 22/332 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M + + + S+ LL A + G D AF +L M P+V +YS
Sbjct: 356 EAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-AKRIMPNVVSYST 414
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA FD+ L +M I + V+YNTL+ Y + E L +M S
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV T N L +G G+ D ++K + + + + P++ T++ L+D Y K G +++
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + +V Y+ +IDA + G + L M E I P+ VT S++ A+
Sbjct: 535 EVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 249 GHAGKPEKL-----GSVLRFIDNSDIMLDTVFFNCLVDAYGRL-------------KCFA 290
G + E+ G L F ++ L N ++ +G+L +
Sbjct: 595 GRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQ 654
Query: 291 EMKGVLEV---MQQRGCKPDKVTYRTMVRAYS 319
E+ +LEV M Q KP+ VT+ ++ A S
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 22/267 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K + ++A LF M + S+ LLS Y + G ++A +L M + +
Sbjct: 419 FAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ L+ K +D+V+ + ++M + + PN +TY+TLID Y + ++ E
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVF 537
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ S DV + + A +G + + ++ GI P++ T+N ++D++G++
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 182 GHFEKMS-----AVMEYMQKYHYSWTIVTYNIVIDAFGR---------AGDLKQ-MEYL- 225
E+ + + + T N VI FG+ D K+ M+ L
Sbjct: 598 ATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELS 657
Query: 226 -----FRLMRSERIKPSCVTLCSLVRA 247
FR M IKP+ VT +++ A
Sbjct: 658 CILEVFRKMHQLEIKPNVVTFSAILNA 684
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ G G++ ++ +E S G ++ F+ L+ +YG++G E+ +V M++Y
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 200 SWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VTYN VIDA G+ G + KQ+ F M+ ++P +T SL+ G E
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK---PDKVTYRTMV 315
++ + N I D +N L+DA + +M E++ Q K P+ V+Y T++
Sbjct: 360 NLFDEMSNRRIEQDVFSYNTLLDAICK---GGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416
Query: 316 RAYSTNG 322
++ G
Sbjct: 417 DGFAKAG 423
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 48/229 (20%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++ ++F M E N +++ L+ Y + GL+ +A + K + + D
Sbjct: 490 GKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK-SAGLRAD 548
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----------- 111
V YS LI + K +L+ +M+ +GI PN VTYN++IDA+GR+
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSN 608
Query: 112 -----------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
++F ++ +++DC+ + ++C L F Q
Sbjct: 609 GGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQ 668
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++ I+P++ TF+ +L++ + FE S ++E ++ +
Sbjct: 669 LE-------------IKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 704
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 105 IDAYGRAKMFAEMELTLVKML--SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE----K 158
ID G +MF + L+ L S+DC +R GN G+ D YE +
Sbjct: 173 IDFSGDDEMFHSLMLSFESKLCGSDDC-------TYIIRELGNRGECDKAVGFYEFAVKR 225
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ Q + + ++ + G+ G + E Y T+ ++ +I A+GR+G
Sbjct: 226 ERRKNEQGKLAS--AMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGL 283
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD---IMLDTVF 275
++ +F M+ ++P+ VT +++ A G G K V +F D + D +
Sbjct: 284 HEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK--QVAKFFDEMQRNCVQPDRIT 341
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
FN L+ R + + + + M R + D +Y T++ A G + A E
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 145/321 (45%), Gaps = 5/321 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--DCQPDVNTYSILIK 71
L Q M + GC +T S++ LL + ++A LL M N C P+V TY+ +I
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
KA FD+ + + M G++PN TYN LI Y + E+ L KM + +P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D +T L + M + G+ P + FNI +Y K G +K +
Sbjct: 276 DCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 332
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+++ S +V Y +IDA + G + E F M +E + P+ V SLV
Sbjct: 333 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 392
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
K E+ ++ + + I + VFFN L+ + E + ++++M+ G +PD +Y
Sbjct: 393 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 452
Query: 312 RTMVRAYSTNGMKNHAKEFQD 332
++ Y G + A++ D
Sbjct: 453 TPLISGYCLAGRTDEAEKVFD 473
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 144/368 (39%), Gaps = 34/368 (9%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TP 57
G CK ++A +FQ M+D G N ++ L+ Y G + + +LE M P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275
Query: 58 DC----------------------------QPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
DC PD + ++I + K DK + + M
Sbjct: 276 DCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+ PN V Y LIDA + + E+ +M++E P++ N + +
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ E+ + GI P+ FN L+ + G + +++ M+ +Y +
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I + AG + E +F M S + P+ VT +L+ Y A + + + R + +
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAK 328
V +N ++ + K F+E K + M G K D TY ++ +N + K
Sbjct: 516 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 575
Query: 329 EFQDLVEK 336
FQ L K
Sbjct: 576 MFQSLCSK 583
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 42/313 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTAL---LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
E+A EL M+D+G N F L L GR + L+EH+ +PD +
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV----GVRPDAFS 451
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------------- 111
Y+ LI A D+ + + M + G+ P VTYNTL+ Y A
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511
Query: 112 ---------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
K F+E + + M++ + D++T N L S +D
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
K ++ S G+Q +I TF I++ + K G E + + +VTY +V
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 631
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ G L++ + LF M P+ L +LVR H G + G+ L +D +
Sbjct: 632 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 691
Query: 271 LDTVFFNCLVDAY 283
++ + L+ +
Sbjct: 692 VEASTTSLLISIF 704
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 144/374 (38%), Gaps = 46/374 (12%)
Query: 14 LFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
LF MV E NT +++ L+ R G +F+ + T D+ +L
Sbjct: 82 LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-- 128
C + + LL M G P+TV+Y+ L+ + AE L L++M++ D
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENR-AEEALELLRMMANDHG 200
Query: 129 --CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-- 184
C P+V T + + D E +++ G++P+ +T+N L+ Y G +
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE 260
Query: 185 -----EKMSA-------------------------VMEYMQKYHYSWTIVTYNIVIDAFG 214
EKMSA ++ M + S +NI A+
Sbjct: 261 VVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 320
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G + + +F MR + P+ V +L+ A G+ + + N + + V
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
FN LV + + + ++ M +G P+ V + T++ G + DL+
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440
Query: 335 EKMDETCLAMKRPD 348
E + RPD
Sbjct: 441 EHVG------VRPD 448
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K+ +A EL+ M++ G + ++ +L+ +S D+AF + + + + Q
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC-SKGLQL 587
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++I+I + LK + L + + G+ PN VTY + + E +
Sbjct: 588 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 647
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M P+ +N +R + G I K +T ++L+ +
Sbjct: 648 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSD 707
Query: 182 GHFEKMSAVMEYMQKYHY 199
+ ++ E KYH+
Sbjct: 708 EYQHHAKSLPE---KYHF 722
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 164/350 (46%), Gaps = 23/350 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ ++P +A+ LFQ M+++G + +S+ ALL AY R+ ++ A +++ PD
Sbjct: 333 ARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDK-GLTPD 391
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V ++S LI +C A ++ +L M T +PN V++ L+ AY + + + E
Sbjct: 392 VMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFH 451
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
ML C P+ L A+ Q + EK + G++ + ++ + + KAG
Sbjct: 452 AMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAG 511
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+E + M K IVTY+ +I A+G G ++ E +F+LM I+P+ C
Sbjct: 512 QWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACC 571
Query: 243 SLVRAYGHAGKPEKLGSVLRF--------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+L+RAYG + EK+ ++ F ++ +F+ C C +
Sbjct: 572 ALLRAYGKGKELEKV--IIFFESMEPQYGVEPDKYAYAAIFWACWT-------CGEWQRA 622
Query: 295 V--LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
V ++ M+ GC PD V Y T++ Y NG + A + ++E+M L
Sbjct: 623 VKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQ---VLERMGSGSL 669
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 151/327 (46%), Gaps = 1/327 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG ++ +A +LF+ M G + +F AL+ A GR D A L E M+ P
Sbjct: 227 LGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKL-GIVP 285
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++ L+ + A +D+ Q+ + M +G Y + A RA+ E
Sbjct: 286 DRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLF 345
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + E + + N L A+ + Q + + + Q G+ P + +++ L+ + A
Sbjct: 346 QVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANA 405
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ V+E M+ +V++ ++ A+ + G+ ++ E +F M P+ V
Sbjct: 406 GQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAW 465
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
CSL+ AY + +K+ + ++ + LD V ++ + A + + + + M +
Sbjct: 466 CSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTK 525
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAK 328
GC P+ VTY ++++AY G+ A+
Sbjct: 526 SGCLPNIVTYSSLIKAYGDVGLWEKAE 552
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q E A E F+ M GC N ++++L+ AYG GL++KA S+ + M +P
Sbjct: 507 LAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRV-GIRP 565
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ L+++ K +KV M Q G+ P+ Y + A +
Sbjct: 566 NPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKY 625
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+ +M C PD + + +GQID + E+ S +
Sbjct: 626 IDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLERMGSGSL 669
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+ + N+V+ G+ + +FR RS ++P+ +L+ A G + + + R
Sbjct: 182 VRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFR 241
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+++ + I FN L+ A GR + E M++ G PD++T+ +V A + G
Sbjct: 242 WMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAG 301
Query: 323 MKNHAKEFQDLVE 335
+ + A+ F D+++
Sbjct: 302 LWDRAQSFIDMMQ 314
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 98/246 (39%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+R + + N ++ G+ + + S EP+ + + A G ++
Sbjct: 177 GLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQA 236
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + + AGI+ I TFN L+ + G+ + + E M+K +T+ ++ A
Sbjct: 237 LKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSA 296
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
AG + + +M++ + A A KP + + + + L
Sbjct: 297 TTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELK 356
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L+ AY R + + +Q +G PD +++ +++ A + G A E +
Sbjct: 357 LESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLE 416
Query: 333 LVEKMD 338
++ D
Sbjct: 417 RMKTSD 422
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F M + C N +FTAL++A R GL +KA + E M+ +PDV Y+ L+
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA-GYEPDVYAYNALM 73
Query: 71 KSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+S +A F + + + S M G P+ +YN ++DAYGRA + + + +M
Sbjct: 74 ESYSRAGFPYGAAE-IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGI 132
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P + + L A+ ++G + E + +G++P N +L+ YG+ G F KM
Sbjct: 133 TPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMED 192
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ MQK I TYNI+I+ +GRAG +++ME LF+L+ ++ ++P VT S + AY
Sbjct: 193 LFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAY 251
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDCQPDVNT 65
EKA E+F+ M + G + + ++ AL+ +Y R+G A FSL++HM C+PD +
Sbjct: 48 EKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM----GCEPDRAS 103
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+I++ + +A + QA+ +M GI P ++ L+ AY A A+ E + +M
Sbjct: 104 YNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMH 163
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD + MN L +G GQ ME + Q + I+T+NIL++ YG+AG E
Sbjct: 164 KSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 223
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+M + + + + +VT+ I A+ R K+ LF M P T L+
Sbjct: 224 RMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLL 283
Query: 246 RAYGHAGKPEKLGSVLR 262
A + E++ +V+R
Sbjct: 284 SACSSEEQIEQVTNVVR 300
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 1/275 (0%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A ++ + M+ T C+P++ T++ L+ + + +K + + M G P+ YN L+
Sbjct: 15 AQNIFDEMR-TQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALM 73
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
++Y RA M CEPD + N + A+G +G + + +E+ + GI
Sbjct: 74 ESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGIT 133
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P++ + +LL +Y AG+ K ++ M K N +++ +GR G +ME L
Sbjct: 134 PTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDL 193
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
F M+ + T L+ YG AG E++ + + + ++ D V + + AY R
Sbjct: 194 FSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSR 253
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
K + + E M GC PD T + ++ A S+
Sbjct: 254 KKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSS 288
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
Q + +M TQ +PN T+ L++A R + + E +M EPDV+ N +
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
++ +G + + Q G +P ++NI++D+YG+AG E AV E M++ +
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITP 134
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T+ ++ +++ A+ AG++ + E + M +KP + S++ YG G+ K+ +
Sbjct: 135 TMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLF 194
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ D +N L++ YGR M+ + +++ + +PD VT+ + + AYS
Sbjct: 195 STMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSR- 253
Query: 322 GMKNHAKEFQDLVEKM-DETC 341
K K +L EKM D C
Sbjct: 254 --KKLYKRCLELFEKMIDAGC 272
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P A E+F M GC+ + S+ ++ AYGR+GL + A ++ E MK P + ++
Sbjct: 82 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRI-GITPTMKSHM 140
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + A K + ++ M G++P+T N++++ YGR F +ME M
Sbjct: 141 LLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKG 200
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C D+ T N + +G +G ++ ME+ ++ + ++P + T+ + +Y + +++
Sbjct: 201 PCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRC 260
Query: 188 SAVMEYM 194
+ E M
Sbjct: 261 LELFEKM 267
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 36/150 (24%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G+ Q K +LF M C A+ ++ L++ YGR+G ++
Sbjct: 180 LYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVER--------------- 224
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ L + + + P+ VT+ + I AY R K++
Sbjct: 225 ---------------------MEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEL 263
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
KM+ C PD T L A + QI+
Sbjct: 264 FEKMIDAGCYPDGGTAKVLLSACSSEEQIE 293
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 164/327 (50%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ + AH LF M + +++ L++++G++G+FD++ L+ M+ D+
Sbjct: 146 RAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQD-RVSGDL 204
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS LI+ K + K ++ + GI P+ V YN++I+ +G+A++F E + + +
Sbjct: 205 VLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHE 264
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD + + L + + + + + A + T NI++D YG+
Sbjct: 265 MREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDM 324
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT +
Sbjct: 325 VKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 384
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ YG + + EK ++++ + I + + ++ ++ +G+ + + ++ G
Sbjct: 385 MIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 444
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ D+V Y+TM+ AY G+ HAK
Sbjct: 445 VEIDQVLYQTMIVAYERAGLVAHAKRL 471
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + +A L M + G +T S++ LLS Y + F +A S+ M N +C
Sbjct: 248 VFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEM-NEANCS 306
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 307 LDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHL 366
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N ++ +G S + + ++ Q GI+P+ T++ ++ +GK
Sbjct: 367 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGK 426
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ RAG + + L ++ I P
Sbjct: 427 AGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTA 486
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ L RA G+ E+ V R ++ + D F C+++ + R K A + V E M+
Sbjct: 487 IKILARA----GRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMR 542
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 543 GAGYFPDSDVIALVLNAY 560
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 155/341 (45%), Gaps = 36/341 (10%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S ++S + + ++ +LL+ + P V Y++++++ L+A +D L +
Sbjct: 100 SIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDE 159
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAE-----------------------MELT----- 120
M + + P+ TY+TLI ++G+A MF E +EL+
Sbjct: 160 MRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCD 219
Query: 121 -------LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+++ PD+ N + FG + + + G+ P +++
Sbjct: 220 YSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYST 279
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
LL Y + F + +V M + + S ++T NI+ID +G+ +K+ + LF MR
Sbjct: 280 LLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMG 339
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
I+P+ V+ +L++ YG A + + R + +I + V +N ++ YG+ +
Sbjct: 340 IEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 399
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ+RG +P+ +TY T++ + G + A FQ L
Sbjct: 400 NLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL 440
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 7/296 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A LF +M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 320 GQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRK-EIEQN 378
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +IK K+ +K L+ +M +GI PN +TY+T+I +G+A +
Sbjct: 379 VVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQ 438
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + I P IL +AG
Sbjct: 439 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKIL----ARAG 494
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + +I+ F R + +F MR P +
Sbjct: 495 RIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIA 554
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSD-IMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ AYG + EK +V R + + + D V F L YG K F ++ + E
Sbjct: 555 LVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQML-SLYGARKDFIMVESLFE 609
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 24/244 (9%)
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ D Q L+S TQ N V +L+ Y E +L++ M+S + W +
Sbjct: 68 SVDMKQLLISISQTQ----NEVELYSLLSPY------KERQLSIRFMVSLISQEADWQRS 117
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L + N + A PS+ +N++L + +A ++ + + M++
Sbjct: 118 LALLDWIN--------------EVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQR 163
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
S TY+ +I +FG+AG + + + M +R+ V +L+ K
Sbjct: 164 ALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKA 223
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S+ + S I D V +N +++ +G+ + F E + ++ M++ G PD V+Y T++
Sbjct: 224 ISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSV 283
Query: 318 YSTN 321
Y N
Sbjct: 284 YVEN 287
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 8/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E A +F + EG +F+AL+SAYGRSG ++A + + MK+ P
Sbjct: 200 LGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSN-GLMP 258
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F KV + M + G++P+ +T+N+L+ R ++
Sbjct: 259 NLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRL 318
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ + + D++T N L A GQ+D + + + I P++ T++ ++D Y K
Sbjct: 319 FSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAK 378
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M+ V+YN ++ + + G +Q + + M + I+ VT
Sbjct: 379 VGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVT 438
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG + +++ V + + + + ++ L+D Y + + E V +
Sbjct: 439 YNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFK 498
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Q G K D V Y ++ A NG+ + V +DE RP+
Sbjct: 499 QAGLKADVVLYSALIDALCKNGL------VESSVTLLDEMTKEGIRPN 540
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 28/338 (8%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF AMVD+G D + ++ LL A + G D AF ++ M T + P+V TYS
Sbjct: 313 EAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMP-TKNILPNVVTYST 371
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K D + ++M G+ + V+YNTL+ Y + F + +M +
Sbjct: 372 MIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
DV T N L +G + D + + +E+ + + P++ T++ L+D Y K G +++
Sbjct: 432 IRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAM 491
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++ +V Y+ +IDA + G ++ L M E I+P+ VT S++ A+
Sbjct: 492 EVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF 551
Query: 249 GHAGKPEKL------GSVLRFIDNSDIMLDTVFF--------NCLVDAYGRL----KCFA 290
G + + + + L+ S I++ N +++ +G+L C A
Sbjct: 552 GRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEA 611
Query: 291 E---------MKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + GV + M + KP+ VT+ ++ A S
Sbjct: 612 KNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACS 649
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 36/299 (12%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMEL 119
S +I + + + +A+ +G ++ LI AYGR+ K+F M+
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 120 -----TLVK------------------------MLSEDCEPDVWTMNCTLRAFGNSGQID 150
LV MLS +PD T N L G +
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWE 313
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ + GI I T+N LLD+ K G + +M M + +VTY+ +I
Sbjct: 314 AARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMI 373
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
D + + G L +F M+ + V+ +L+ Y G+ E+ V + ++N+ I
Sbjct: 374 DGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIR 433
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V +N L+ YG+ + E++ V E M++ P+ +TY T++ YS G+ A E
Sbjct: 434 KDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE--KFQSAGIQPSINTFNIL 174
+E L+ S C PD +T LR GN G +C+E + +G + +
Sbjct: 139 LENVLLNFESRLCGPDDYTF--LLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAM 196
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ + G+ G E AV + K Y T+ ++ +I A+GR+G + +F M+S +
Sbjct: 197 ISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGL 256
Query: 235 KPSCVTLCSLVRAYGHAG-KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ VT +++ A G G + +K+ + + ++ + D + FN L+ R + +
Sbjct: 257 MPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAAR 316
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M +G D TY T++ A G + A E
Sbjct: 317 RLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEI 353
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 167/348 (47%), Gaps = 8/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E A +F+A + EG +F+A++SAYGRSG ++A + MK+ +P
Sbjct: 87 LGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG-LKP 145
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ +I +C K F +V + +M G++P+ +T+N+L+ + ++
Sbjct: 146 NLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSL 205
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M++ + D++T N L A GQ+D + + + I P++ T++ ++D Y K
Sbjct: 206 SCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAK 265
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M+ S V+YN ++ + + G ++ + R M + I+ VT
Sbjct: 266 AGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVT 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG K + + V + + + + ++ L+D Y + + E V +
Sbjct: 326 YNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFK 385
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G K D V Y ++ A NG+ A V +DE RP+
Sbjct: 386 KAGLKADVVLYSALIDALCKNGLVESA------VSLLDEMTKEGIRPN 427
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L MV+ G D + ++ LL A + G D AF ++ M + P+V TYS
Sbjct: 200 EAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMP-AKNILPNVVTYST 258
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA D + L ++M GI + V+YNTL+ Y + F E +M +
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
DV T N L +G + D + K +E+ ++ + P++ T++ L+D Y K G + +
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V +K +V Y+ +IDA + G ++ L M E I+P+ VT S++ A+
Sbjct: 379 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438
Query: 249 GHAGKPEKL 257
G E +
Sbjct: 439 GRPATTESV 447
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + ++F+ M N +++ L+ Y + GL+ +A + K + D
Sbjct: 334 GKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKK-AGLKAD 392
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM----- 117
V YS LI + K + +LL +M+ +GIRPN VTYN++IDA+GR +
Sbjct: 393 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAG 452
Query: 118 ---ELTLVKMLSEDCEPDVWTM------NCTLRAFG-----------NSGQIDTM--EKC 155
EL + + S E ++ N ++ FG NSG + M
Sbjct: 453 QTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGV 512
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ K I+P++ TF+ +L++ + FE+ S ++E ++ +
Sbjct: 513 FHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLF 554
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 153/409 (37%), Gaps = 96/409 (23%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ A E Q +++ G D LL+ R D LL + N DC+ +
Sbjct: 4 RHTSVAQEALQNVIEYGKDERALE-NVLLNFESRLSGSDDYVFLLRELGNRGDCKKAICC 62
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM- 124
+ +K K K+ + +I GR EM T+ K
Sbjct: 63 FEFAVKRERKKNEQGKLAS------------------AMISTLGRLGK-VEMAKTVFKAA 103
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-H 183
L+E V+ + + A+G SG + K + + G++P++ T+N ++D+ GK G
Sbjct: 104 LTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVE 163
Query: 184 FEKMSAVMEYMQKYHYS------------------WT-----------------IVTYNI 208
F+++ + + M + W I TYN
Sbjct: 164 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNT 223
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE------------- 255
++DA + G L + M ++ I P+ VT +++ Y AG+ +
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG 283
Query: 256 ----------------KLG------SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
KLG V R ++NS I D V +N L+ YG+ + ++
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA----KEFQDLVEKMD 338
V E M+ R P+ +TY T++ YS G+ A +EF+ K D
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKAD 392
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 70/379 (18%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNT---PD----------- 58
LF M+ +GC+A ++T ++ Y R D A LLE MK + PD
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 59 --------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
++ TY+ LIK A + L +M +G PN+
Sbjct: 64 VNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNS 123
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
TYN LI YGR +F E +M C DV T N + +G G ++ ME+ ++
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ G+ P T+N LLD Y K +F K ++ M + Y I TYNI++ + +
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCS----------------------------------- 243
+ + LF ++S+ + P+ VT +
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ +YGH G ++ + + + S I+ DT + L+DAYG+ E + + M + G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Query: 304 CKPDKVTYRTMVRAYSTNG 322
PD +TY +VRA++ G
Sbjct: 364 FVPDGITYGILVRAFANAG 382
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LFQ M D+G N+ ++ AL+ YGR GLF +A L + M C DV+TY+I I
Sbjct: 109 KLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGV-GCAKDVHTYNIAIAM 167
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + ++ LL +M T+G+ P+ VTYNTL+D Y + F + L +M P+
Sbjct: 168 YGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPN 227
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI------------------- 173
+WT N L + + + +E +S G+ P+I T++
Sbjct: 228 IWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWD 287
Query: 174 ----------------LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
L++SYG G +++ A + M+K Y ++DA+G+AG
Sbjct: 288 EMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ E L+ M E P +T LVRA+ +AG+
Sbjct: 348 RCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK E L M +G + ++ LL Y + F KA +L M +
Sbjct: 167 MYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEA-GYR 225
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+I++ S K + + L ++ ++G+ PN VTY+ ++ YGR ++ E
Sbjct: 226 PNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKL 285
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C P + + + ++G+ G C++ + +GI P + L+D+YGK
Sbjct: 286 WDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGK 345
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
AG + + M K + +TY I++ AF AG L
Sbjct: 346 AGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 4/312 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ +S KA + MK
Sbjct: 143 VMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGM 202
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL+++ +A ++ AL +++ + P+ T+N ++DAYG+ M E
Sbjct: 203 ERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKE 262
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME L +M S C+PD+ T N + ++G + D ME+ ++ + +P++ TFN ++
Sbjct: 263 MESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMIT 322
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V + M Y+ +TY +I +G + + +F M + + +
Sbjct: 323 NYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEM 382
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P + +L + + + L AY + ++ +L
Sbjct: 383 KVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTKADQKELLEKLL 442
Query: 297 EVMQQRGCKPDK 308
++M G P+K
Sbjct: 443 KLMDSDGILPNK 454
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS LI K L S+M G RP+T YN LI A+ ++ + L
Sbjct: 133 DNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSR---DKSKAL 189
Query: 122 VKMLS--------EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+K L E C+P++ T N LRAF + ++ +++ + + P I TFN
Sbjct: 190 IKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNG 249
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++D+YGK G ++M +V+ M+ I+T+N++ID++GR + +ME +F+ + +
Sbjct: 250 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSK 309
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
KP+ T S++ YG A EK +V + + + + + + L+ YG C + +
Sbjct: 310 EKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAR 369
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + M + T M+ Y NG+ A
Sbjct: 370 EIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEA 403
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A EL + G + + TAL+SA G +G +A +L + +P
Sbjct: 244 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPR 303
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K +K + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 304 TRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLK 363
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + ++G+QP + +N+++D++GK
Sbjct: 364 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYN 423
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
V M+ +VT+N +IDA + G LF+ MR P T
Sbjct: 424 CLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYN 483
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G + + +++ + ++ + + + LVD YGR + E +E M+
Sbjct: 484 IMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 543
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP Y +V AY+ G+ +HA
Sbjct: 544 GLKPSPTMYHALVNAYAQRGLADHA 568
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 151/309 (48%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A + M + G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 321 KNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 379
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G++P+ YN +ID +G+ +M E
Sbjct: 380 ILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEG 439
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +++ + + P T+NI+++ G+ + +
Sbjct: 440 IEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVE 499
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+M M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 500 TMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 559
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +V++ + + TV N L++A+G + E VL+ M++ +PD
Sbjct: 560 AQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDV 619
Query: 309 VTYRTMVRA 317
+TY T+++A
Sbjct: 620 ITYTTLMKA 628
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 157/310 (50%), Gaps = 4/310 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L + M +G ++ F+ +L+ + G + KAF++L M + QPD + Y++
Sbjct: 356 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDRHFYNV 414
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLSE 127
+I + K + + M +GI P+ VT+NTLIDA+ + + MEL +M
Sbjct: 415 MIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMEL-FKEMRES 473
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C P T N + G + +E + + G+ P+I T+ L+D YG++G +++
Sbjct: 474 NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 533
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+E M+ + Y+ +++A+ + G + + MR++ ++ S V L SL+ A
Sbjct: 534 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINA 593
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+G + + SVL+F+ +D D + + L+ A R++ F ++ + E M GC PD
Sbjct: 594 FGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 653
Query: 308 KVTYRTMVRA 317
+ R M+R+
Sbjct: 654 RKA-RAMLRS 662
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 7/281 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDK---VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AE 116
PD+ +YS L+ S L ++ LL D+ + P+ ++ LI A+ RA + A
Sbjct: 193 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAA 252
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILL 175
+EL L + P + + A G +G++ E + +F AG I+P +N LL
Sbjct: 253 LEL-LASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALL 311
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y K G + V++ M + + TY++++DA+ RAG + L + M ++ +K
Sbjct: 312 KGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 371
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
PS ++ + G +K +VLR + S + D F+N ++D +G+ C V
Sbjct: 372 PSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDV 431
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
M+ G +PD VT+ T++ A+ G + A E F+++ E
Sbjct: 432 FNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRE 472
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ + M ++G N ++T L+ YGRSG + +A +E MK +
Sbjct: 488 LLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD-GLK 546
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+LI+A+G + E
Sbjct: 547 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSV 606
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M D PDV T ++A Q D + YE+ ++G P
Sbjct: 607 LQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 652
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q EKA+ LF M+D+G N ++T ++ ++ + D+A + + M + +PD TY
Sbjct: 176 QVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR-GVKPDNGTY 234
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI L + +V +L +MST G+ P+ +TY L+D + E L M
Sbjct: 235 NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR 294
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +PDV L + G + M + G+ P+ FNI+ +Y K E+
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M++ S +V++ +IDA + G + F M +E + P+ SLV
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GK EK + + + I +D VFFN L+ E + ++++M + G +P
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ ++Y T+V + G + A + D++
Sbjct: 475 NVISYNTLVAGHCLTGRIDEAAKLLDVM 502
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ G N S+ L++ + +G D+A LL+ M + +P+ TY+IL
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN-GLKPNEFTYTIL 517
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++ KA D +L +M +G+ P TYNT++ + F+E + M++
Sbjct: 518 LRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT 577
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ D++T N L + +D K + + S Q TFNI++ + K G E
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + Y +VTY ++ + G L + + LF M P+ L +LVR
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
H G + G L +D + L+ + L+ Y R
Sbjct: 698 HRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 129/322 (40%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E F ++ G N + LL + D+A +L + C PDV Y+
Sbjct: 107 EHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNT 166
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + +K L +M QGI PN VTY T+ID +A++ + +M+
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T NC + + ++G+ + + E+ + G++P T+ +LLD K G +
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + + Y I++ + G L +M LM + P+ + AY
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
E+ + + + D V F L+DA +L + M G P+
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
+ ++V T G A+E
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEEL 428
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 4/331 (1%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M++EG N F++L+ G ++KA L + + C V +++ C
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ + Q L+ M G+RPN ++YNTL+ + E L M+S +P+ +
Sbjct: 454 EGRVME-AQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEF 512
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T LR + + ++D + + G+ P + T+N +L + G F + + + M
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
I TYNI+++ + + + +FR + S+ + VT ++ A G+
Sbjct: 573 INSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRK 632
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E + I ++ D V + + + E G+ M++ G P+ +
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
VR G + A + + K+DE +++
Sbjct: 693 VRRLLHRGDISRAGVY---LYKLDEKNFSLE 720
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 137/335 (40%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C++ A F +M +G + + LL Y G + S L+ M P+
Sbjct: 280 GRCRE---ARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN-GVSPN 335
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++I+ + K ++ + + M QG+ P+ V++ LIDA + + L
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E P+++ + + G+ + E+ + + GI FN L+ + G
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ M + +++YN ++ G + + L +M S +KP+ T
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYT 515
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+R Y A + + S+ R + + +N ++ + F+E + M
Sbjct: 516 ILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINS 575
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
K D TY ++ N + A K F+ L K
Sbjct: 576 RTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 41/332 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG---LFDKAFSLLEHMKN--TPDCQPDV 63
++A +LF ++ A+ ++F LL+ R+G ++ SL M + P+
Sbjct: 31 DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLV 122
TYSILI + + A + G R N + + L+ AK E ++ L+
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PDV N + F GQ++ + + GI P+
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPN--------------- 195
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+VTY VID +A + + + +F+ M +KP T
Sbjct: 196 --------------------VVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYN 235
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y GK +++ +L + + D + + L+D + E + + M ++
Sbjct: 236 CLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRK 295
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
G KPD Y ++ Y+T G + F DL+
Sbjct: 296 GIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 96/250 (38%), Gaps = 48/250 (19%)
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG---HFEKMSAVMEYMQK- 196
RA S +D K +++ S+ FN LL +AG E++ ++ M +
Sbjct: 22 RARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARE 81
Query: 197 --YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR-----------SERIK-------- 235
+ TY+I+I F R G L+ F L+ S+ +K
Sbjct: 82 CSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRV 141
Query: 236 -----------------PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
P V +++ + G+ EK ++ + + I + V +
Sbjct: 142 DEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTT 201
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
++D + + KGV + M RG KPD TY ++ Y + G +++++V+ ++
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG------KWKEVVQMLE 255
Query: 339 ETCLAMKRPD 348
E PD
Sbjct: 256 EMSTHGLEPD 265
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 155/343 (45%), Gaps = 38/343 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------------ 55
LF M + +++ L++ +G+ GLFD A S L+ M+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 56 ----------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
PD+ Y+ +I KA F + ++L+S+M T G+ PNT
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+Y+TL+ Y K F E +M C D+ T N + +G +K +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGM 181
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI+PS+ +FN LL YG A F + + MQ+ + T+VTYN +I +G+ +
Sbjct: 182 RKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEH 241
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ AY R A K +L ++ +PD + T + + G
Sbjct: 302 IVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 340
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI P+ V++NTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSNVIAVVLNAY 406
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + + SF LL YG + LF +A L M+ + +
Sbjct: 166 GQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQT 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 385 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 5/330 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ + M++ G N +F +L+ + + G D A LL M +P+V TYS LI
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV-AKGMRPNVVTYSALI 169
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ F + + +L +M G+ P+ TY+ LI +A E E L +M C
Sbjct: 170 DGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 229
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV + + AF SG++ +K ++ + P + T+N ++D K G + +
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 289
Query: 191 MEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ MQ+ +VTY+ VI+ ++ L + + L M P VT +++
Sbjct: 290 LDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ E+ +L+ + + + V + L+ + + E + V+E M+ GC P+ V
Sbjct: 350 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 409
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY TMV +G KE Q LV++M +
Sbjct: 410 TYNTMVNGLCVSG---RIKEAQQLVQRMKD 436
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GCD N ++TAL++A+ R+ ++A LLE M+ C P++ TY++L+ + K
Sbjct: 52 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGA 110
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
Q ++ M G PN +T+N+L+D + + + L M+++ P+V T + +
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
S + ++ E+ +++G+ P T++ L+ KA E+ ++ M +
Sbjct: 171 GLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+V Y+ +I AF ++G L + + + MR +R P VT +++ GK + +L
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290
Query: 262 -RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ ++ D++ D V ++ +++ + E + +L+ M + GC PD VTY T++
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A +L MV +G N +++AL+ +S F +A +LE MK +
Sbjct: 136 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS-GVT 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI KA ++ + +L M+ G P+ V Y+++I A+ ++ E + T
Sbjct: 195 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 254
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYG 179
L +M + PDV T N + G+I + ++ Q +G + P + T++ +++
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ + +++ M K + +VTY +ID + G L++ EYL + M+ P+ V
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVL 296
T +L+ A K ++ V+ + N+ + V +N +V+ GR+K E + ++
Sbjct: 375 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIK---EAQQLV 431
Query: 297 EVMQ--QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ M+ + C PD TYRT+V A ++ + +E + L+E+M
Sbjct: 432 QRMKDGRAECSPDAATYRTIVNALMSSDL---VQEAEQLLEQM 471
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 7/301 (2%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+G A LLE MK+ PD T++ +I + A D + + + G PN V
Sbjct: 3 AGDLHAALELLEEMKSA-GFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVV 58
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TY LI A+ RAK E L +M C P++ T N + A + + +K
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
G P++ TFN L+D + K G+ + ++ M +VTY+ +ID ++
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + + M++ + P T +L+ A K E+ +LR + S D V ++ +
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ A+ + E + L+ M+++ PD VTY T++ G E Q ++++M E
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG---KIAEAQVILDQMQE 295
Query: 340 T 340
+
Sbjct: 296 S 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
N+G + + E+ +SAG P T ++ + AG + M++++ +V
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVV 58
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I AF RA L++ L MR P+ VT LV A V++ +
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + FN LVD + + + + +L +M +G +P+ VTY ++
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 169
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + E+A L Q M GC N ++T L+S ++ D+A ++E M+N C P
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA-GCPP 406
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
++ TY+ ++ + + Q L+ M P+ TY T+++A + + E E
Sbjct: 407 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQ 466
Query: 120 TLVKM 124
L +M
Sbjct: 467 LLEQM 471
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+ P+ A EL + G + + TAL+SA G +G +A +L + +P
Sbjct: 239 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ L+K ++ + + +L +MS G+ P+ TY+ L+DAY RA + + L
Sbjct: 299 TRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ +P + + L F + G + Q++G++P + +N+++D++GK
Sbjct: 359 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYN 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
M++ +VT+N +IDA + G + LF MR P T
Sbjct: 419 CLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYN 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G E + ++L + ++ + + + LVD YGR + E +E M+
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
G KP Y +V AY+ G++ + L++ +
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKAL 573
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 18/309 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ++ M G + +++ L+ AY R+G ++ A LL+ M+ +P +S
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD-GVKPSSYVFSR 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + K A+L +M G+RP+ YN +ID +G+ KM E
Sbjct: 375 ILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPDV T N + A G+ D + +E+ + + P T+NI+++ G+ H+E +
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVE 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M++ I+TY ++D +GR+G K+ M+++ +KPS +LV AY
Sbjct: 495 AMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + D + + L+ A R++ F ++ + E M GC PD+
Sbjct: 555 AQRG----------------LRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 598
Query: 309 VTYRTMVRA 317
R M+R+
Sbjct: 599 KA-RAMLRS 606
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDK---VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
D PD+ +YS L+ S L ++ LL D+ + P+ ++ LI A+ RA +
Sbjct: 185 DFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALP 244
Query: 115 -AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFN 172
A +EL L + P + + A G +G++ E + +F AG I+P +N
Sbjct: 245 DAALEL-LASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYN 303
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y + + V++ M + + TY++++DA+ RAG + L + M ++
Sbjct: 304 ALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 363
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+KPS ++ + G +K +VLR + S + D F+N ++D +G+ C
Sbjct: 364 GVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHA 423
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M++ G +PD VT+ T++ A+ G + A E L E+M E+
Sbjct: 424 MDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE---LFEEMRES 468
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E + M ++G N ++T L+ YGRSG + +A +E MK +
Sbjct: 483 LLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD-GLK 541
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y AL++ + +G+RP+ +TY TL+ A R + F ++ +
Sbjct: 542 PSPTMY----------------HALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVI 585
Query: 121 LVKMLSEDCEPD 132
+M++ C PD
Sbjct: 586 YEEMITSGCAPD 597
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 168/337 (49%), Gaps = 3/337 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ +Q E A L MV++ + +F+ L+S YGR+ + A L+ M+ +PD+
Sbjct: 37 RARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEME-AGGIKPDL 95
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+S LI+ K + K +L S + GI P+ V YN++I+ YG+AK + E + L +
Sbjct: 96 VIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAE 155
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD + + A+ S + ++ + + ++ GIQ + T N+++D YGK
Sbjct: 156 MKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEM 215
Query: 184 FEKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTL 241
+ M K +VTYN +I + A L + +F M+++ ++P+ +T
Sbjct: 216 VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G + EK ++R + I + V ++ L+ YG+ + + + +++
Sbjct: 276 NTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLRE 335
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+G + D++ Y++M+ Y G+ HAK + +++ D
Sbjct: 336 KGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPD 372
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 44/386 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K ++A L M + G +T S+T L++AY S + +A + MK T Q
Sbjct: 139 LYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMK-TKGIQ 197
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMS-TQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
DV T +++I K + L MS T GI+ N VTYNT+I Y A++ +E
Sbjct: 198 LDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFN 257
Query: 120 TLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M ++ EP+V T N L G + Q + + K Q GI+P+ T++ L+ Y
Sbjct: 258 VFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIY 317
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG----------DLKQMEYLFR- 227
GK G +++ + + + +++ + + Y +I + RAG +LKQ + + R
Sbjct: 318 GKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRD 377
Query: 228 -----LMRSERIKPSC---------------VTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
L ++E+++ + VT S+++ + + + V + S
Sbjct: 378 TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRES 437
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D+ L+ AYG+L+ + + + M++RGC +K + M++ Y G
Sbjct: 438 GFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLY---GDARKI 494
Query: 328 KEFQDLVEKM-------DETCLAMKR 346
+E +D+ + DE L M R
Sbjct: 495 REAEDMFAALKLEGLDGDELYLTMIR 520
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ ++ +L + M P + Y++++K+ L+A ++ + L+ +M + + P+ T++
Sbjct: 5 WQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFS 64
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TLI YGRA + L +M + +PD+ + + G + K +++
Sbjct: 65 TLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS 124
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-----SWTIV------------- 204
GI P +N +++ YGKA +++ ++ M++ S+TI+
Sbjct: 125 GIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEA 184
Query: 205 -----------------TYNIVIDAFGRAGDLKQMEYLFRLM-RSERIKPSCVTLCSLVR 246
T N++ID +G+ ++ E LF M ++ I+ + VT ++++
Sbjct: 185 KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIK 244
Query: 247 AYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y A + +V ++ N + + + +N ++ +G + ++ MQQRG +
Sbjct: 245 VYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIE 304
Query: 306 PDKVTYRTMVRAYSTNGMKNHAK-EFQDLVEK---MDETC 341
P+ VTY T++ Y G + A F+ L EK MDE
Sbjct: 305 PNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEIL 344
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 161/314 (51%), Gaps = 2/314 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ ++ E+F+ M D+G + F L+ ++ GL ++A + M+ + +
Sbjct: 323 RSAKEVWEIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK-GIRSNTIV 381
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ L+ + K+ ++V+ L +++ +G++P TYN L+DAY R +E L +M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREME 441
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
EP+V + C + A+G + ++ M + + + G++PS +++ L+ +Y +G
Sbjct: 442 DLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
EK A E M ++ TY ++DAF R+GD +++ +++LM E+IK + +T +L
Sbjct: 502 EKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTL 561
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G + V+ + + +N L++AY R A++ +L+ M
Sbjct: 562 LDGFAKQGLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Query: 305 KPDKVTYRTMVRAY 318
KPD +TY TM+ A+
Sbjct: 622 KPDSITYSTMIYAF 635
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 3/322 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M +G +NT + L+ AY +S ++ L +K +P TY+I
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIK-AKGLKPTAATYNI 419
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSE 127
L+ + + D V+ LL +M G+ PN ++ LI AYGR K ++M ++M
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P + + A+ SG + +E+ GI+PS+ T+ LLD++ ++G EK+
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKL 539
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M + T +TYN ++D F + G + + ++PS +T L+ A
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKMGLQPSVMTYNMLMNA 599
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y G+ KL +L+ + ++ D++ ++ ++ A+ R++ F ++M + G PD
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 308 KVTYRTMVRAYSTNGMKNHAKE 329
+Y + RA N +K ++
Sbjct: 660 PRSYEKL-RAILENKVKTKNRK 680
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 163/359 (45%), Gaps = 38/359 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + + L + D+ + + + A +S S +D A+ + E M N +
Sbjct: 247 LLGRERMADYILLLLSNLPDKEEFKDVRLYNAAISGLSASQRYDDAWEVYEAM-NKINVF 305
Query: 61 PDVNTYSILIKSCLKAF--------AFDKV--------------------------QALL 86
PD T +I+I + KA F+K+ +AL+
Sbjct: 306 PDNVTCAIMITTMRKAGRSAKEVWEIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++M +GIR NT+ YNTL+DAY ++ E+E ++ ++ +P T N + A+
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYA 425
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA-VMEYMQKYHYSWTI 203
Q D +E + + G++P++ +F L+ +YG+ M+A M+K +
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+Y +I A+ +G ++ F M E IKPS T SL+ A+ +G EKL + +
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKL 545
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ I + +N L+D + + + E + V+ + G +P +TY ++ AY+ G
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGG 604
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QP+ L + M D G + N +SFT L+SAYGR+ + D A MK +P ++
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRMKKV-GLKPSSHS 487
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K A +M +GI+P+ TY +L+DA+ R+ ++ ML
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLML 547
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E + T N L F G +F G+QPS+ T+N+L+++Y + G
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K+ +++ M + +TY+ +I AF R D K+ + ++M
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +KSCL + + +Q + S R +V + L GR +M + L L +
Sbjct: 215 SGFVKSCLYFYEWMSLQ----EPSLASPRACSVLFTLL----GRERMADYILLLLSNLPD 266
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH--- 183
++ DV N + S + D + YE + P T I++ + KAG
Sbjct: 267 KEEFKDVRLYNAAISGLSASQRYDDAWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAK 326
Query: 184 -----FEKMS----------------------------AVMEYMQKYHYSWTIVTYNIVI 210
FEKMS + M+K + YN ++
Sbjct: 327 EVWEIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
DA+ ++ ++++E LF ++++ +KP+ T L+ AY +P+ + ++LR +++ +
Sbjct: 387 DAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKG-VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ F CL+ AYGR K ++M M++ G KP +Y ++ AYS +G A
Sbjct: 447 PNVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKA 504
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 153/309 (49%), Gaps = 2/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F+ M +G + AL+ ++ GL +A +L ++ + Y+ L+
Sbjct: 323 AWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKK-GVSSNAIVYNTLM 381
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ ++ + L +M T+GI+ T+N L+ AY R +E + +M +
Sbjct: 382 DAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLK 441
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + C + A+G + M + K + GI+P+ +++ L+ +Y +G EK A
Sbjct: 442 PNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYA 501
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E MQ+ +I TY ++DAF RAGD + + +++LMR +++ + VT +LV +
Sbjct: 502 AFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFA 561
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++ V+ N + + +N L++AY R +++ +LE M KPD V
Sbjct: 562 KHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSV 621
Query: 310 TYRTMVRAY 318
TY TM+ A+
Sbjct: 622 TYSTMIYAF 630
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ + +G +N + L+ AY +S ++A L MK T + T++IL+ +
Sbjct: 361 ILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMK-TKGIKHTEATFNILMYAY 419
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSEDCEPD 132
+ + V+ L+++M G++PN +Y LI AYG+ K ++M +KM + +P
Sbjct: 420 SRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPT 479
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + A+ SG + +E Q GI+PSI T+ LLD++ +AG + + + +
Sbjct: 480 SHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWK 539
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M++Y T VT+N ++D F + G K+ + + + P+ +T L+ AY G
Sbjct: 540 LMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGG 599
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ KL +L + ++ D+V ++ ++ A+ R++ F++
Sbjct: 600 QHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQ 638
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNTPDCQPDVNT 65
QPE +L M D G N +S+T L+SAYG+ + D A MK +P ++
Sbjct: 424 QPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKD-GIKPTSHS 482
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K A +M +GI+P+ TY L+DA+ RA + M
Sbjct: 483 YTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMR 542
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E T N + F G KF + G+ P++ T+N+L+++Y + G
Sbjct: 543 RYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHS 602
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
K+ ++E M ++ VTY+ +I AF R D Q
Sbjct: 603 KLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQ 638
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M +G + S+TAL+ AY SG +KA++ E+M+ +P + TY+ L+
Sbjct: 464 AADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQRE-GIKPSIETYTALL 522
Query: 71 KSCLKAF---AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+ +A K+ L+ +G R VT+NTL+D + + + E + K +
Sbjct: 523 DAFRRAGDTQTLMKIWKLMRRYKVEGTR---VTFNTLVDGFAKHGHYKEARDVISKFANV 579
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P V T N + A+ GQ + + E+ + ++P T++ ++ ++ +
Sbjct: 580 GLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLR------- 632
Query: 188 SAVMEYMQKYHYSWTIVTYNIVID 211
V ++ Q + Y +V VID
Sbjct: 633 --VRDFSQAFFYHQEMVKSGQVID 654
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 96 PNTVTY---NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
P+ VT L G+A+M ++ L + S DV N + +SG+ +
Sbjct: 228 PSLVTPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRCEDA 287
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGH--------FEKMSA--------------- 189
K YE ++ + P T +I++ K GH FEKM+
Sbjct: 288 WKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIK 347
Query: 190 -------------VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ ++K S + YN ++DA+ ++ +++ E LF M+++ IK
Sbjct: 348 SFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKH 407
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG-V 295
+ T L+ AY +PE + ++ + ++ + + + CL+ AYG+ K ++M
Sbjct: 408 TEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADA 467
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M++ G KP +Y ++ AYS +G A
Sbjct: 468 FLKMKKDGIKPTSHSYTALIHAYSVSGWHEKA 499
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 4/328 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ A+ +S KA E MK
Sbjct: 117 VMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKTI 176
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP++ TY+IL+++ +A ++ L D+ + P+ TYN ++DAYG+ M E
Sbjct: 177 DRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGMITE 236
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 237 MESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPTFNSMIT 296
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V++ M + + VT +I + + + +F + S +
Sbjct: 297 NYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQIFDELVSSQNNV 356
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
++ +++ AY G P + +L + + + L AY + ++ +L
Sbjct: 357 HLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLIQKLL 416
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ M +G P+K + + A+ K
Sbjct: 417 KRMNSQGIVPNKKFFLDALEAFGNTDKK 444
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL----KAFAFD 80
A+ ++ L+S GR G A L M+N+ C+PD + Y+ LI + L K+ A
Sbjct: 106 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS-GCRPDTSVYNSLIGAHLHSRDKSKALA 164
Query: 81 KVQALLSDMST-QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
K M T +PN VTYN L+ A+ +A ++++ + PD++T N
Sbjct: 165 KALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGV 224
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ A+G +G I ME + +S +P + TFNIL+DSYG+ F+KM V + + +
Sbjct: 225 MDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKE 284
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T T+N +I +G+A ++ E + M KP+ VT L+ Y + +
Sbjct: 285 KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQ 344
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + +S + N ++DAY E +L+ + ++G P TY+ + +AY+
Sbjct: 345 IFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYT 404
Query: 320 TNGMKNHAKEFQDLVEKMD 338
N K Q L+++M+
Sbjct: 405 K---ANDKKLIQKLLKRMN 420
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 45/172 (26%)
Query: 190 VMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRS--------------- 231
V +MQK W + Y+ +I GR G ++ +LF MR+
Sbjct: 94 VFRWMQKQR--WYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIG 151
Query: 232 -------------------------ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+R +P+ VT L+RA+ AG ++L + + +D
Sbjct: 152 AHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDE 211
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
S + D +N ++DAYG+ EM+ VL M+ C+PD +T+ ++ +Y
Sbjct: 212 SPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSY 263
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 168/337 (49%), Gaps = 3/337 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ +Q E A L MV++ + +F+ L+S YGR+ + A L+ M+ +PD+
Sbjct: 37 RARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEME-AGGIKPDL 95
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+S LI+ K + K +L S + GI P+ V YN++I+ YG+AK + E + L +
Sbjct: 96 VIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAE 155
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD + + A+ S + ++ + + ++ GIQ + T N+++D YGK
Sbjct: 156 MKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEM 215
Query: 184 FEKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTL 241
+ M K +VTYN +I + A L + +F M+++ ++P+ +T
Sbjct: 216 VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G + EK ++R + I + V ++ L+ YG+ + + + +++
Sbjct: 276 NTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLRE 335
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+G + D++ Y++M+ Y G+ HAK + +++ D
Sbjct: 336 KGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPD 372
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 44/386 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K ++A L M + G +T S+T L++AY S + +A + MK T Q
Sbjct: 139 LYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMK-TKGIQ 197
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMS-TQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
DV T +++I K + L MS T GI+ N VTYNT+I Y A++ +E
Sbjct: 198 LDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFN 257
Query: 120 TLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M ++ EP+V T N L G + Q + + K Q GI+P+ T++ L+ Y
Sbjct: 258 VFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIY 317
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG----------DLKQMEYLFR- 227
GK G +++ + + + +++ + + Y +I + RAG +LKQ + + R
Sbjct: 318 GKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRD 377
Query: 228 -----LMRSERIKPSC---------------VTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
L ++E+++ + VT S+++ + + + V + S
Sbjct: 378 TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRES 437
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D+ L+ AYG+L+ + + + M++RGC +K + M++ Y G
Sbjct: 438 GFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLY---GDARKI 494
Query: 328 KEFQDLVEKM-------DETCLAMKR 346
+E +D+ + DE L M R
Sbjct: 495 REAEDMFAALKLEGLDGDELYLTMIR 520
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 151/340 (44%), Gaps = 41/340 (12%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ ++ +L + M P + Y++++K+ L+A ++ + L+ +M + + P+ T++
Sbjct: 5 WQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFS 64
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TLI YGRA + L +M + +PD+ + + G + K +++
Sbjct: 65 TLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS 124
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYM----------------------QKY--- 197
GI P +N +++ YGKA +++ ++ M QKY
Sbjct: 125 GIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEA 184
Query: 198 ----------HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM-RSERIKPSCVTLCSLVR 246
+ T N++ID +G+ ++ E LF M ++ I+ + VT ++++
Sbjct: 185 KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIK 244
Query: 247 AYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y A + +V ++ N + + + +N ++ +G + ++ MQQRG +
Sbjct: 245 VYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIE 304
Query: 306 PDKVTYRTMVRAYSTNGMKNHAK-EFQDLVEK---MDETC 341
P+ VTY T++ Y G + A F+ L EK MDE
Sbjct: 305 PNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEIL 344
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 6/339 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G CK+ A ++++ M+ EG + ++++AL+ A GR LLE M+ T +P+
Sbjct: 206 GFCKE---ALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME-TLGLRPN 261
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+I I+ +A D +L M +G P+ VTY LIDA A + +
Sbjct: 262 IYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYT 321
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM + +PD+ T + FGN G ++T+++ + + ++ G P + T+ IL+++ K+G
Sbjct: 322 KMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSG 381
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ M+ + TYN +I L + LF M S + P+ +
Sbjct: 382 KVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYV 441
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ YG G PEK + IM N + + + E K + +
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
G PD VTY M++ YS G + A + L E + E C
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKL--LTEMLSEGC 538
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 146/326 (44%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + +L + M G N ++T + GR+G D A+ +L+ M++ C P
Sbjct: 237 LGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDE-GCGP 295
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY++LI + A DK + L + M +P+ VTY TL+ +G ++
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M ++ PDV T + A SG++D + + GI P+++T+N L+
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + M+ + T +Y + ID +G+ GD ++ F M+ I PS
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + + G+ + + I N + D+V +N ++ Y + + +L M
Sbjct: 476 NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
GC+PD + +++ G + A
Sbjct: 536 EGCEPDIIVVNSLIDTLYKAGRVDEA 561
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 15/335 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E + M +G + ++T L+ A +SG D+AF +L+ M+ P+++TY+
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMR-VRGIVPNLHTYNT 407
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI L D+ L ++M + G+ P +Y ID YG+ + T KM
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + N +L + G+I + + + G+ P T+N+++ Y KAG +K +
Sbjct: 468 IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKAT 527
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M I+ N +ID +AG + + +F ++ ++ P+ VT L+
Sbjct: 528 KLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL 587
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEMKGVLEVMQQ 301
G GK K + + S +TV FN L+D + LK F M +M
Sbjct: 588 GKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMT----IMN- 642
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
C PD +TY T++ G +A F ++K
Sbjct: 643 --CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK 675
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 147/355 (41%), Gaps = 34/355 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK---NTP 57
+LG+ + + A+ + + M DEGC + ++T L+ A +G DKA L M+ + P
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
D PDV TY+IL+++ K+ D+ +L
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +GI PN TYNTLI + E M S P ++ + +G
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + +EK + GI PSI N L S + G + + + S VTY
Sbjct: 451 GDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N+++ + +AG + + L M SE +P + + SL+ AG+ ++ + + +
Sbjct: 511 NMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ V +N L+ G+ + + M++ GC P+ VT+ ++ N
Sbjct: 571 LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN 625
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ ++ EL+ M+ GC N + ++SA +S +KA L + + D P
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEII-SGDFSPT 892
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI LKA ++ + +M +PN YN LI+ +G+A
Sbjct: 893 PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD+ + + +G++D +E+ + G+ P ++N++++ GK+
Sbjct: 953 RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ ++ M+ S + TYN +I FG AG + Q +F ++ ++P+ T
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072
Query: 243 SLVRAYGHAGKPEKLGSVLR 262
+L+R + +G ++ SV +
Sbjct: 1073 ALIRGHSKSGNKDRAFSVFK 1092
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A ++F+ M D C N + L++ +G++G + A L + M +P
Sbjct: 903 LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE-GIRP 961
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ +Y+IL++ D ++ G+ P+TV+YN +I+ G+++ E
Sbjct: 962 DLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLF 1021
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+++T N + FGN+G +D K +E+ Q G++P++ T+N L+ + K+
Sbjct: 1022 SEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKS 1081
Query: 182 GHFEKMSAVMEYM 194
G+ ++ +V + M
Sbjct: 1082 GNKDRAFSVFKKM 1094
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 4/326 (1%)
Query: 5 CKQPEK--AHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
CKQ + A +LF G +S+ L+ + + A L MKN C P
Sbjct: 763 CKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA-GCCP 821
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY++L+ + K+ D++ L ++M +G +PN +T+N +I A ++ +
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++S D P T + +G+ + K +E+ +P+ +NIL++ +GKA
Sbjct: 882 YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ + + M K + +Y I+++ G + + F ++ + P V+
Sbjct: 942 GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ G + + E+ S+ + N I + +N L+ +G + + E +Q
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQF 1061
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G +P+ TY ++R +S +G K+ A
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRA 1087
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 139/348 (39%), Gaps = 36/348 (10%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + Q + L+ ++A S E + CQ D ++ C + A D
Sbjct: 712 GLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDA 771
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ + G P +YN L+D + V+M + C P+++T N L
Sbjct: 772 KKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLD 831
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD------------------------- 176
A G S +ID + + Y + G +P+I T NI++
Sbjct: 832 AHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSP 891
Query: 177 ---SYG-------KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+YG KAG E+ + E M Y YNI+I+ FG+AG++ LF
Sbjct: 892 TPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLF 951
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
+ M E I+P + LV G+ + + + + DTV +N +++ G+
Sbjct: 952 KRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKS 1011
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+ E + M+ RG P+ TY ++ + GM + A K F++L
Sbjct: 1012 RRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK A +LF+ M+ EG + +S+T L+ +G D A E +K T P
Sbjct: 938 FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT-GLDP 996
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +Y+++I K+ ++ +L S+M +GI P TYN LI +G A M +
Sbjct: 997 DTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMF 1056
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
++ EP+V+T N +R SG D ++K G P+ TF
Sbjct: 1057 EELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 160/418 (38%), Gaps = 78/418 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + KA +LF +M + GC NT +F ALL ++ D A + M +C P
Sbjct: 587 LGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM-TIMNCSP 645
Query: 62 DVNTYSILIKSCLK------AFAF-----------------------------DKVQALL 86
DV TY+ +I +K AF F D ++ ++
Sbjct: 646 DVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVM 705
Query: 87 SDMSTQGIRPNTVTYNTLIDA------YGRAKMFAE------------MELTLVKML--- 125
+ G++ + + L++ A FAE + L L+++L
Sbjct: 706 EFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQ 765
Query: 126 ---------------SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
S P + NC + + K + + ++AG P+I T
Sbjct: 766 KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFT 825
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N+LLD++GK+ +++ + M I+T+NI+I A ++ + + L+ +
Sbjct: 826 YNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEII 885
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
S P+ T L+ AG+ E+ + + + + +N L++ +G+
Sbjct: 886 SGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVN 945
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ + M + G +PD +Y +V G D V +E L PD
Sbjct: 946 IACDLFKRMIKEGIRPDLKSYTILVECLFMTG------RVDDAVHYFEELKLTGLDPD 997
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L G+++ M ++ Q I + NT+ + + G + + M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ + +YN +I + G K+ +++ M SE +KPS T +L+ A G
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ +L ++ + + + + GR + G+L+ M+ GC PD VTY +
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVL 303
Query: 315 VRAYSTNGMKNHAKEF 330
+ A G + AKE
Sbjct: 304 IDALCAAGKLDKAKEL 319
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 93/260 (35%), Gaps = 42/260 (16%)
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
AF FD +Q Q I N TY T+ A + L KM + ++
Sbjct: 142 AFVFDLMQK-------QVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYS 194
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
N + G K Y++ S G++PS+ T++ L+ + G+ + ++E M+
Sbjct: 195 YNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME 254
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
I TY I I GRAG + + + M E P VT L+ A AGK +
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
K K + M+ KPD VTY T++
Sbjct: 315 K-----------------------------------AKELYTKMRASSHKPDLVTYITLM 339
Query: 316 RAYSTNGMKNHAKEFQDLVE 335
+ G K F +E
Sbjct: 340 SKFGNYGDLETVKRFWSEME 359
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 154/338 (45%), Gaps = 7/338 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA+ LF M+D G N + +++ + DKA ++L+ M + P+ TY+ L
Sbjct: 139 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-HIMPNCTTYNSL 197
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I L + + + +L +MS G RPN VTYN LID ++ AE M+
Sbjct: 198 IHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGP 257
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD T L + G + M + G++ + +TF+I + +Y K G ++ S
Sbjct: 258 KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
MQ+ + IVTY VID + G L F M + + P+ +T +L+ +
Sbjct: 318 TFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFS 377
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK EK + + + I D F ++D + E + + ++M + G KP+ V
Sbjct: 378 MYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVV 437
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+Y TM+ Y G E ++++ +D+ L +P
Sbjct: 438 SYNTMIHGYFIAG------EVGEVMKLLDDMLLIGLKP 469
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 141/334 (42%), Gaps = 1/334 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + Q M+DE N ++ +L+ Y SG + +A +L+ M +P
Sbjct: 166 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ-RP 224
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY++LI K+ + + + + M G +P+ TY +L+ Y EM
Sbjct: 225 NVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVK 284
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + T + + A+ G++D + K Q G P I T+ ++D K
Sbjct: 285 DLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKI 344
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M S I+T+ +I F G ++ E LF M I P
Sbjct: 345 GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIF 404
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ GK + + + + + V +N ++ Y E+ +L+ M
Sbjct: 405 TAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
G KP VT+ T++ + G+K + L++
Sbjct: 465 IGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLID 498
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 1/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQPDVNTYSILIKS 72
+ + M + GC + S++ LL ++A L+ M D C PDV +YS +I
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K K L M GI PN VT N++ID + + + E L +M+ E P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ + ++ G +P++ T+N+L+D K+G + +
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + TY ++ + G+L +M + LM ++ + T + AY G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++ + M D V + ++D ++ + M G P+ +T+
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370
Query: 313 TMVRAYSTNGMKNHAKEF 330
T++ +S G A+E
Sbjct: 371 TLIHGFSMYGKWEKAEEL 388
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 3/277 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
PD+ T+ ILI C A + A L + G+R + V + L+ K ++ M +
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDS 177
L +M C PDV++ + L+ + + + G P + +++ ++
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G K + M + +VT N VID + + + E + + M E I P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
C T SL+ Y +G+ + +L+ + + V +N L+D + AE + +
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
M Q G KPD TY +++ Y+T G +DL+
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLM 287
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 157/311 (50%), Gaps = 1/311 (0%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAF 79
D + +++ L++ +G+ GLFD A S L+ M+ + D+ YS LI+ K +
Sbjct: 2 DRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDR-VRGDLVLYSNLIELSRKLCDY 60
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
K ++ S + GI P+ V YN++I+ +G+AK+F E + +M + PD +
Sbjct: 61 SKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTAL 120
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGI 180
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK +
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+++ + + I + + ++ ++ +G++ + E ++ G + D+V Y+TM+ AY
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300
Query: 320 TNGMKNHAKEF 330
G+ +HAK
Sbjct: 301 RAGLVSHAKRL 311
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 9/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S+TALL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + E ++ V Y +I A+ RAG + + L +++ P +
Sbjct: 267 VGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKT----PDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++D + + K ++ + V + M+
Sbjct: 323 RDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYSNIVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETCL 342
D ++ AY G + ++ D+ +M DE C+
Sbjct: 383 GLEYFSDSYVIALVLNAY---GKLHEFEKANDVYTEMQDEGCV 422
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + FG G D +K + ++ + ++ L++ K + K ++
Sbjct: 7 PDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+++ +V YN +I+ FG+A ++ L MR+ + P V+ +L+ Y
Sbjct: 67 FSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVE 126
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K + SV + +LD N ++D YG+L E + M++ G +P+ V+
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVS 186
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y T++R Y + A L+++ D
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKD 214
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 1/333 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++A + + M GC + ++ +L+S+Y + GL +A L E M+ QPD
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEME-VKGIQPD 353
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI +A D +M G +PN TYN LI +G F EM
Sbjct: 354 VITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFD 413
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ S PDV T N L FG +G + +++ + +G P +T+ L+ SY + G
Sbjct: 414 DLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 473
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + + M + I TYN V+ A R G +Q E LF M + +P ++
Sbjct: 474 LFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYS 533
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL+ AY +A K +K+ ++ I I LV ++ +E + + +R
Sbjct: 534 SLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRR 593
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
C D MV Y N M +E L++
Sbjct: 594 RCSLDINVLNAMVSVYGKNRMVKKVEEILSLMK 626
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 2/326 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F M G + + +F +LL YG++ + D+A +L+ M+ C P V TY+
Sbjct: 266 KEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEME-LGGCPPSVVTYNS 324
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S +K + L +M +GI+P+ +TY TLI RA T +ML
Sbjct: 325 LISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNG 384
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P++ T N ++ G G+ M ++ +SAG P + T+N LL +G+ G ++S
Sbjct: 385 CKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVS 444
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + M+K Y TY +I ++ R G Q +++ M I P T +++ A
Sbjct: 445 GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSAL 504
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+ + ++N D D + ++ L+ AY K +MK + E + +
Sbjct: 505 ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564
Query: 309 VTYRTMVRAYS-TNGMKNHAKEFQDL 333
+T+V S N + K F +L
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLEL 590
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G ++ +L+S+Y R GLFD++ + + M PD++TY+ ++ +
Sbjct: 446 VFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEA-GIYPDISTYNAVLSAL 504
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +++ + L ++M RP+ ++Y++L+ AY AK +M+ + +E E
Sbjct: 505 ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + EK + + IN N ++ YGK +K+ ++
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSL 624
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ + + TYN ++ + R GD ++ E + ++S +P + +++ AYG G+
Sbjct: 625 MKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQ 684
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + +S ++ D V +N V +Y F E ++ M RGCKP++ TY +
Sbjct: 685 MKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNS 744
Query: 314 MVRAYSTNGMKNHAKEF 330
+++ Y +G AK F
Sbjct: 745 ILQEYCRHGKIADAKSF 761
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 10/340 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQP-DVNTYSI 68
A +F+ MV G ++ +L Y + + + +L++ MKN D P D TY+
Sbjct: 197 AVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKN--DGIPLDRYTYNT 254
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI C + + + + +M G P+ VT+N+L+D YG+A+M E L +M
Sbjct: 255 LISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGG 314
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P V T N + ++ G + + E+ + GIQP + T+ L+ +AG +
Sbjct: 315 CPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAI 374
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + + TYN +I G G +M +F +RS P VT +L+ +
Sbjct: 375 GTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVF 434
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G G ++ V + + S + + + L+ +Y R F + + + M + G PD
Sbjct: 435 GQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDI 494
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TY ++ A + G A++ +E +D C RPD
Sbjct: 495 STYNAVLSALARGGRWEQAEKLFAEMENLD--C----RPD 528
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 3/314 (0%)
Query: 24 DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK-AFAFDKV 82
+ + ++TAL+SA+ R+ F A ++ M QP + TY++++ K A + V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVAN-GIQPAIVTYNVVLHVYSKIAVPWKDV 233
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
AL+ M GI + TYNTLI R ++ E +M + EPD T N L
Sbjct: 234 VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDV 293
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+G + D ++ + G PS+ T+N L+ SY K G ++ + + E M+
Sbjct: 294 YGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPD 353
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TY +I RAG + + M KP+ T +L++ +G GK ++ +V
Sbjct: 354 VITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFD 413
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ ++ + D V +N L+ +G+ +E+ GV + M++ G P++ TY +++ +YS G
Sbjct: 414 DLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 473
Query: 323 MKNHAKE-FQDLVE 335
+ + + E ++ ++E
Sbjct: 474 LFDQSMEIYKRMIE 487
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 151/307 (49%), Gaps = 1/307 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L +M ++G + ++ L+S R L+ +A + + M+ +PD T++ L+
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAA-GFEPDKVTFNSLLDVY 294
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
KA D+ +L +M G P+ VTYN+LI +Y + + E +M + +PDV
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + +G+ID Y++ G +P++ T+N L+ +G G F +M AV +
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ + +VT+N ++ FG+ G ++ +F+ M+ P T SL+ +Y G
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ + + + + I D +N ++ A R + + + + M+ C+PD+++Y +
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534
Query: 314 MVRAYST 320
++ AY+
Sbjct: 535 LLHAYAN 541
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C + A++S YG++ + K +L MK + TY+ L+ + +K
Sbjct: 595 CSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGS-SINLSTATYNSLMHMYSRLGDCEKC 653
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ +L+++ + G RP+ +YNT+I AYGR E +M S PD+ T N +++
Sbjct: 654 ENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKS 713
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ + + + G +P+ T+N +L Y + G + + + + H
Sbjct: 714 YVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLH 769
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E FQ M +G + + AL+ ++ GL ++A + M+ + Y+ L+
Sbjct: 297 AWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKK-GISSNAIVYNTLM 355
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ ++ + L +M +G+ P + TYN L+DAY R +E L++M E
Sbjct: 356 DAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLE 415
Query: 131 PDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V + C + A+G ++ D + + + GI+P+ +++ L+ +Y G EK
Sbjct: 416 PNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYT 475
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E M++ +I TY ++DAF RAGD + + +++LM S++I+ + VT L+ +
Sbjct: 476 AFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFA 535
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + V+ + +N L++AY R + + +L+ M KPD +
Sbjct: 536 KQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSI 595
Query: 310 TYRTMVRAY 318
TY TM+ AY
Sbjct: 596 TYSTMIYAY 604
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 159/349 (45%), Gaps = 9/349 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQ 60
L C + + A +++ M + + + +++ + G K A+ + M N +
Sbjct: 252 LSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRM-NRKGVK 310
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ LIKS ++ + S+M +GI N + YNTL+DAY ++ E E
Sbjct: 311 WSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGL 370
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M ++ P T N + A+ Q + +E + Q G++P++ ++ L+ +YG+
Sbjct: 371 FGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGR 430
Query: 181 AGHFEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
M+A M+K T +Y +I A+ G ++ F M+ E IKPS
Sbjct: 431 QKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIE 490
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ A+ AG + L + + + + I V FN L+D + + + E + V+
Sbjct: 491 TYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEF 550
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G +P +TY ++ AY+ G H++ Q L E T L +K PD
Sbjct: 551 GKIGFQPTVMTYNMLMNAYARGG--QHSRLPQLLKEM---TSLNLK-PD 593
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QPE L M D G + N +S+T L+SAYGR + D A MK +P ++
Sbjct: 398 QPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKV-GIKPTSHS 456
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + +K +M +GI+P+ TY L+DA+ RA + ML
Sbjct: 457 YTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLML 516
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
S+ E T N L F G +F G QP++ T+N+L+++Y + G
Sbjct: 517 SDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHS 576
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
++ +++ M + +TY+ +I A+ R D K+ + + M
Sbjct: 577 RLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQM 620
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR+G+ D LL ++ T + DV Y+ I +D + +M T
Sbjct: 213 LFPMLGRAGMGDDLMVLLRNLPKTRQFR-DVRIYNSAISGLSSCGRYDDAWKVYDEMETN 271
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
IRP+ VT + +I +R G+S + D
Sbjct: 272 NIRPDHVTCSIMI--------------------------------TVMRKDGHSAK-DAW 298
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E +++ G++ S+ L+ S+ G + + M+K S + YN ++DA
Sbjct: 299 E-FFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDA 357
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ ++ +++ E LF M+++ + P+ T L+ AY +PE + ++L + + + +
Sbjct: 358 YSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPN 417
Query: 273 TVFFNCLVDAYGRLKCFAEMKG-VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ CL+ AYGR K ++M M++ G KP +Y ++ AYS G A
Sbjct: 418 VKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKA 473
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 134/307 (43%), Gaps = 6/307 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK-AFAFDKVQALLSD 88
+ + +S G +D A+ + + M+ T + +PD T SI+I K +
Sbjct: 245 YNSAISGLSSCGRYDDAWKVYDEME-TNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQR 303
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M+ +G++ + LI ++ + E + +M + + N + A+ S +
Sbjct: 304 MNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNR 363
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ E + + ++ G+ P+ T+NIL+D+Y + E + ++ MQ + +Y
Sbjct: 364 VEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTC 423
Query: 209 VIDAFGRAGDLKQMEY-LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I A+GR + M F M+ IKP+ + +L+ AY G EK + +
Sbjct: 424 LISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKRE 483
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + L+DA+ R + + ++M + +VT+ ++ ++ G H
Sbjct: 484 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQG---HY 540
Query: 328 KEFQDLV 334
E +D++
Sbjct: 541 MEARDVI 547
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG------------LFDK----------- 45
EKA+ F+ M EG + +++TALL A+ R+G L DK
Sbjct: 471 EKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNIL 530
Query: 46 --AFSLLEHMKNTPDC---------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
F+ H D QP V TY++L+ + + ++ LL +M++ +
Sbjct: 531 LDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNL 590
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+P+++TY+T+I AY R + F +M+ PD
Sbjct: 591 KPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPD 628
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E FQ M +G + + AL+ ++ GL ++A + M+ + Y+ L+
Sbjct: 297 AWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKK-GISSNAIVYNTLM 355
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ ++ + L +M +G+ P + TYN L+DAY R +E L++M E
Sbjct: 356 DAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLE 415
Query: 131 PDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V + C + A+G ++ D + + + GI+P+ +++ L+ +Y G EK
Sbjct: 416 PNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYT 475
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E M++ +I TY ++DAF RAGD + + +++LM S++I+ + VT L+ +
Sbjct: 476 AFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFA 535
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + V+ + +N L++AY R + + +L+ M KPD +
Sbjct: 536 KQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSI 595
Query: 310 TYRTMVRAY 318
TY TM+ AY
Sbjct: 596 TYSTMIYAY 604
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 159/349 (45%), Gaps = 9/349 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQ 60
L C + + A +++ M + + + +++ + G K A+ + M N +
Sbjct: 252 LSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRM-NRKGVK 310
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ LIKS ++ + S+M +GI N + YNTL+DAY ++ E E
Sbjct: 311 WSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGL 370
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M ++ P T N + A+ Q + +E + Q G++P++ ++ L+ +YG+
Sbjct: 371 FGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGR 430
Query: 181 AGHFEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
M+A M+K T +Y +I A+ G ++ F M+ E IKPS
Sbjct: 431 QKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIE 490
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ A+ AG + L + + + + I V FN L+D + + + E + V+
Sbjct: 491 TYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEF 550
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G +P +TY ++ AY+ G H++ Q L E T L +K PD
Sbjct: 551 GKIGFQPTVMTYNMLMNAYARGG--QHSRLPQLLKEM---TSLNLK-PD 593
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QPE L M D G + N +S+T L+SAYGR + D A MK +P ++
Sbjct: 398 QPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKV-GIKPTSHS 456
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + +K +M +GI+P+ TY L+DA+ RA + ML
Sbjct: 457 YTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLML 516
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
S+ E T N L F G +F G QP++ T+N+L+++Y + G
Sbjct: 517 SDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHS 576
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
++ +++ M + +TY+ +I A+ R D K+ + + M
Sbjct: 577 RLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQM 620
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L GR+G+ D LL ++ T + DV Y+ I +D + +M T
Sbjct: 213 LFPMLGRAGMGDDLMVLLRNLPKTRQFR-DVRIYNSAISGLSSCGRYDDAWKVYDEMETN 271
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
IRP+ VT + +I +R G+S + D
Sbjct: 272 NIRPDHVTCSIMI--------------------------------TVMRKDGHSAK-DAW 298
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E +++ G++ S+ L+ S+ G + + M+K S + YN ++DA
Sbjct: 299 E-FFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDA 357
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ ++ +++ E LF M+++ + P+ T L+ AY +PE + ++L + + + +
Sbjct: 358 YSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPN 417
Query: 273 TVFFNCLVDAYGRLKCFAEMKG-VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ CL+ AYGR K ++M M++ G KP +Y ++ AYS G A
Sbjct: 418 VKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKA 473
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 134/307 (43%), Gaps = 6/307 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK-AFAFDKVQALLSD 88
+ + +S G +D A+ + + M+ T + +PD T SI+I K +
Sbjct: 245 YNSAISGLSSCGRYDDAWKVYDEME-TNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQR 303
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M+ +G++ + LI ++ + E + +M + + N + A+ S +
Sbjct: 304 MNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNR 363
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ E + + ++ G+ P+ T+NIL+D+Y + E + ++ MQ + +Y
Sbjct: 364 VEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTC 423
Query: 209 VIDAFGRAGDLKQMEY-LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I A+GR + M F M+ IKP+ + +L+ AY G EK + +
Sbjct: 424 LISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKRE 483
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + L+DA+ R + + ++M + +VT+ ++ ++ G H
Sbjct: 484 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQG---HY 540
Query: 328 KEFQDLV 334
E +D++
Sbjct: 541 MEARDVI 547
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG------------LFDK----------- 45
EKA+ F+ M EG + +++TALL A+ R+G L DK
Sbjct: 471 EKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNIL 530
Query: 46 --AFSLLEHMKNTPDC---------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
F+ H D QP V TY++L+ + + ++ LL +M++ +
Sbjct: 531 LDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNL 590
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+P+++TY+T+I AY R + F +M+ PD
Sbjct: 591 KPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPD 628
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 157/315 (49%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++A + + M D G + + +L+A+ + KA S E +K T +PD
Sbjct: 231 GSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGT-HIRPD 289
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG--IRPNTVTYNTLIDAYGRAKMFAEMELT 120
T++I+I +K +DK + + M + P+ VT+ ++I Y E
Sbjct: 290 TTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAA 349
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E +P++ + N L A+ G + + + + + G +P + ++ LL++YG+
Sbjct: 350 FNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGR 409
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ +K + + +++ + IV+YN +IDA+G G L+ + R M ++I P+ V+
Sbjct: 410 SRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVS 469
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ K+ +VL + I L+TV +N + +Y + + + + M+
Sbjct: 470 ICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMR 529
Query: 301 QRGCKPDKVTYRTMV 315
++ K D VTY ++
Sbjct: 530 KKKIKSDSVTYTVLI 544
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 168/367 (45%), Gaps = 38/367 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ ++A LF M C + +++ AL++A+GR+G + A ++++ M P +TY
Sbjct: 165 RTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA-IPPSRSTY 223
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR----AKMFAEMELT-- 120
+ LI +C + + + + M+ G+ P+ VT+N ++ A+ +K + EL
Sbjct: 224 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKG 283
Query: 121 ----------------LVKMLSED---------------CEPDVWTMNCTLRAFGNSGQI 149
LVK+ D C PDV T + + G I
Sbjct: 284 THIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHI 343
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ E + + G++P+I ++N LL +Y G + V +++ + +V+Y +
Sbjct: 344 ENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSL 403
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++A+GR+ ++ +F++++ +KP+ V+ +L+ AYG G E +LR ++ I
Sbjct: 404 LNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKI 463
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ V L+ A GR ++ VL + RG K + V Y + + +Y G + A +
Sbjct: 464 HPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAID 523
Query: 330 FQDLVEK 336
+ + K
Sbjct: 524 LYNSMRK 530
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 142/340 (41%), Gaps = 37/340 (10%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + MKN + + Y+++I+ + D+ + L
Sbjct: 115 KNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFF 174
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ TYN LI+A+GRA + + ML P T N + A G+SG
Sbjct: 175 EMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 234
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+K G+ P + T NI+L ++ + K + E ++ H T+N
Sbjct: 235 NWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHN 294
Query: 208 IVI-------------DAFGR------------------------AGDLKQMEYLFRLMR 230
I+I D F G ++ E F +M
Sbjct: 295 IIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMML 354
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+E +KP+ V+ +L+ AY G + V I + D V + L++AYGR +
Sbjct: 355 AEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 414
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + + +++++ KP+ V+Y ++ AY +NG+ A E
Sbjct: 415 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 454
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 8/335 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F + G + S+T+LL+AYGRS KA + + +K + +P++ +Y+ L
Sbjct: 380 EALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRN-NLKPNIVSYNAL 438
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + +L +M I PN V+ TL+ A GR +++ L
Sbjct: 439 IDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGI 498
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ + N + ++ N G+ D Y + I+ T+ +L+ K F + +
Sbjct: 499 KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALS 558
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRA----GDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
ME M + Y+ +I A+ + G + + E F LM+S P VT +++
Sbjct: 559 FMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAML 618
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
AY A K EKL ++ ++ +D+ LDT+ L+ A+ + + + + M+++
Sbjct: 619 DAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIP 678
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ MV A G+ + K D+++ M+ +
Sbjct: 679 LSDTIFFEMVSAC---GLLHDWKTAVDMIKYMEPS 710
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 153/369 (41%), Gaps = 42/369 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++P+KA E+F+ + N S+ AL+ AYG +GL + A +L M+ P+
Sbjct: 408 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQD-KIHPN 466
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V + L+ +C + K+ +LS +GI+ NTV YN+ I +Y + +
Sbjct: 467 VVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYN 526
Query: 123 KMLSEDCEPDVWTMN------CTLRAFGNS------------------------------ 146
M + + D T C + FG +
Sbjct: 527 SMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQA 586
Query: 147 ---GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
GQI E + +S G P + T+ +LD+Y A +EK+ A+ E M++
Sbjct: 587 SALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDT 646
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+ ++ AF + G ++ L + MR + I S +V A G + ++++
Sbjct: 647 IACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKY 706
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ S ++ + N +++ G+ M + M G + + TY +++ ++G
Sbjct: 707 MEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSG- 765
Query: 324 KNHAKEFQD 332
N K +D
Sbjct: 766 -NWRKYLED 773
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 159/331 (48%), Gaps = 3/331 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M ++GC +F AL+ +G G +++ LLE M + +PD TY+I
Sbjct: 155 KEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNI 214
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ +K ++ M G++P+ VTYNT+ AY R K + + +M +
Sbjct: 215 LVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNK 274
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+V T + + G + K K Q G+ P++ FN LL + + +
Sbjct: 275 VAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVD 334
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ MQ++ +VTY+ +++A+ AG +++ E +F+ M I+P L + Y
Sbjct: 335 ETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGY 394
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+P+K ++L + + V F ++ + + V + M + +P+
Sbjct: 395 VRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNL 454
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ T++ Y G N + ++L++ M+E
Sbjct: 455 NTFETLIWGY---GEANEPWKAEELLQIMEE 482
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 38/314 (12%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
CQ V + + L+K+ ++ +V ++ ++ +G RP VTY T++ A K F +
Sbjct: 65 CQ-TVRSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIP 123
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L L K+ PD N + AF SG + K + K + G +P+ +TFN L+ +
Sbjct: 124 LLLKKVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGF 183
Query: 179 GKAGHFEKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G G E+ S ++E M + + TYNI++ A+ ++++ + M +KP
Sbjct: 184 GIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPD 243
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR------------ 285
VT ++ RAY + + ++ + N+ + + +VD Y +
Sbjct: 244 VVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIY 303
Query: 286 -----------------LKCFAEM---KGV---LEVMQQRGCKPDKVTYRTMVRAYSTNG 322
LK F ++ KGV L +MQ+ G KPD VTY T++ A+S+ G
Sbjct: 304 KMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAG 363
Query: 323 MKNHAKE-FQDLVE 335
+ +E FQD+++
Sbjct: 364 LMEKCEEMFQDMIK 377
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 147/337 (43%), Gaps = 8/337 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + + G ++ F +++A+ SG +A + M+ C+P +T++ LIK
Sbjct: 125 LLKKVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREK-GCKPTASTFNALIKGF 183
Query: 74 LKAFAFDKVQALLSDMS-TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
++ LL MS + I+P+ TYN L+ A+ + + +M+ +PD
Sbjct: 184 GIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPD 243
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T N RA+ + + + Q+ + P++ T I++D Y K G+ +
Sbjct: 244 VVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIY 303
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
MQ + + +N ++ F D K ++ LM+ +KP VT +++ A+ AG
Sbjct: 304 KMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAG 363
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
EK + + + S I D F+ L Y R + + +LE M G P+ V +
Sbjct: 364 LMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFT 423
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
T++ + + A + +D + D C +P+
Sbjct: 424 TIISGWCS------AAKMEDALRVYDRMCRMDVQPNL 454
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 12/322 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA + MV G + ++ + AY R +A L+ M+N P+V T I
Sbjct: 226 EKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNN-KVAPNVRTCGI 284
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K + M G+ PN +N+L+ + ++ TL M
Sbjct: 285 VVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFG 344
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---SAGIQPSINTFNILLDSYGKAGHFE 185
+PDV T + + A+ ++G MEKC E FQ +GI+P + F+IL Y +AG +
Sbjct: 345 VKPDVVTYSTIMNAWSSAG---LMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPK 401
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K A++E M + +V + +I + A ++ ++ M ++P+ T +L+
Sbjct: 402 KAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETLI 461
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
YG A +P K +L+ ++ ++ + DA+ + E K +L Q
Sbjct: 462 WGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILNDDQSSVLI 521
Query: 306 P---DKVTYRTMVRAYS--TNG 322
P +K + R Y TNG
Sbjct: 522 PRTDEKPVEEDLQRVYQEKTNG 543
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ +P+KA L +AM G N FT ++S + + + A + + M D QP++
Sbjct: 396 RAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRM-DVQPNL 454
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
NT+ LI +A K + LL M G+ P T + DA+
Sbjct: 455 NTFETLIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVADAW 499
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G +++ + + + E +P+ VT +++ A + + + +L+ ++ + + D++FF
Sbjct: 82 GKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFF 141
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N +++A+ E + M+++GCKP T+ +++ + G+ +E L+E
Sbjct: 142 NPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGF---GIIGKPEESSKLLEI 198
Query: 337 M 337
M
Sbjct: 199 M 199
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 38/343 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-----------------NT 56
LF M + +++ L++ +G+ GLFD A S L+ M+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 57 PDCQ-----------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
C PD+ Y+ +I KA F + ++L+S+M T G+ PNT
Sbjct: 62 KXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+Y+TL+ Y K F E +M C D+ T N + +G G +K +
Sbjct: 122 SYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ +
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEH 241
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ AY R A K +L ++ +PD + T + + G
Sbjct: 302 IVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 340
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMREIK-CX 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 XGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSNVIAVVLNAY 406
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + + +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVIEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 385 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|449525698|ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 494
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 165/348 (47%), Gaps = 8/348 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ ++ K S E MK
Sbjct: 136 IMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGM 195
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL ++ +A D+V L D+ + + TYN ++DAYG+ E
Sbjct: 196 ERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKE 255
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
MEL L +M S +PD+ + N + ++G D ME+ ++ + +P++ TFN ++
Sbjct: 256 MELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMIT 315
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V M+ Y + VT +I +G + + +F M + +
Sbjct: 316 NYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEV 375
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P + + N + D+ + L AY + ++ +L
Sbjct: 376 RVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLL 435
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
+ M + G P+K R + A T G + Q+L E++ ET + +
Sbjct: 436 KNMDKAGIIPNK---RFFLDALGTIGSSQENQNLQEL-EQVQETQIVV 479
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 15/272 (5%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS LI K L S+M G RP+T YN LI A+ +K A+ L
Sbjct: 126 DNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK---AL 182
Query: 122 VKMLS--------EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
VK+LS E C+P++ T N RAF + ++D + ++ + + I T+N
Sbjct: 183 VKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNG 242
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++D+YGK G+ ++M ++ M+ I+++N++ID++G+ +ME +F+ + +
Sbjct: 243 VMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 302
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC--LVDAYGRLKCFAE 291
+P+ T S++ YG A EK V R + D+ D + C L+ YG C ++
Sbjct: 303 ERPTLPTFNSMITNYGKARLREKAEEVFRKM--KDMGYDPSYVTCESLIMMYGHCDCVSK 360
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + M G + T M+ Y NG+
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 392
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 32/317 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK KQP A ++F M GC AN ++TAL++A+ R GL +KA + E M+ +PD
Sbjct: 303 GKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGH-EPD 361
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ L+++ +A + S M G P+ +YN L+DAYGRA + E E T
Sbjct: 362 VYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFE 421
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + P + + L A SG + E+ + +G++P N +L +Y +AG
Sbjct: 422 SLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAG 481
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ M ++ M S + ++N+ ++A+ RAG L +ME F +R + K
Sbjct: 482 RLDDMERLLAAMD-LAGSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGK------- 533
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
I D V + + Y R K + + + E M
Sbjct: 534 -----------------------KGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDA 570
Query: 303 GCKPDKVTYRTMVRAYS 319
GC PD T + ++ A S
Sbjct: 571 GCYPDAGTAKVLMAACS 587
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +Q KA ++ A+++ C ++ LL AY + +A ++ M+ P
Sbjct: 198 GRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEH-GIPPS 256
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ + LKA K + M + R NT TY +I+ YG++K
Sbjct: 257 ATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFN 316
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S C+ ++ T + AF G + E+ +E+ Q AG +P + +N L+++Y +AG
Sbjct: 317 EMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAG 376
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S + MQ +YNI++DA+GRAG ++ E F ++ + + P+ +
Sbjct: 377 FPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHM 436
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ A+ +G + V+ + S + DT N ++ AY R +M+ +L M
Sbjct: 437 LLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLA 496
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G D ++ V AY+ G
Sbjct: 497 G-SADVGSHNVAVNAYARAG 515
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ + YN LIDAYGR + + E +L C P T LRA+ N+ + E
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEG 243
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q GI PS +N LD KA K V + M+K TY ++I+ +G
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYG 303
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++ +F M+S K + T +LV A+ G EK V + + D
Sbjct: 304 KSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVY 363
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+N L++AY R + +MQ GC+PD+ +Y +V AY G+ A+ F+ L
Sbjct: 364 AYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESL 423
Query: 334 VEK 336
++
Sbjct: 424 KQQ 426
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 35/208 (16%)
Query: 165 QPSINTFNILLDSYGK-----------------------------------AGHFEKMSA 189
+P I +N+L+D+YG+ A +
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEG 243
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V+ MQ++ + YN +D +A + +++ M+ ER + + T ++ YG
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYG 303
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ +P + + + + + LV+A+ R + + V E MQQ G +PD
Sbjct: 304 KSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVY 363
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
Y ++ AYS G A E L++ M
Sbjct: 364 AYNALMEAYSRAGFPQGASEIFSLMQHM 391
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+C+Q + + G +T + A+L AY R+G D LL M
Sbjct: 448 VGRCEQ------VMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAGSA-- 499
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-----GIRPNTVTYNTLIDAYGRAKMFAE 116
DV ++++ + + +A +++A + + GI + V++ + + Y R K + +
Sbjct: 500 DVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGK 559
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
+M+ C PD T + A + Q++ +
Sbjct: 560 CLEIFEEMVDAGCYPDAGTAKVLMAACSDERQVEQV 595
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 147/330 (44%), Gaps = 4/330 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ E A +L + MV GC + S+ AL+ R +A L + +P+V T
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPT 295
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ILI LK ++ L S + G+ P+ +TY ID +A + L L M
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ C PDV + N + ++D E ++ G P+ +FN L+ +AG ++
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA---GDLKQMEYLFRLMRSERIKPSCVTLC 242
K + M K T+VTYNI++D +A G +K+ LF M + P VT
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 475
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ G AGK + +L ++ + + +N L+ L E + M ++
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK 535
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
GC PD +TY T++ A M + A D
Sbjct: 536 GCVPDTITYGTIISALCKQEMVDKALALFD 565
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 14/339 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A + Q MV E + ++ +L++ ++G D+A L+ +P+ V
Sbjct: 167 KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPN----V 222
Query: 64 NTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS LI C + + + LL M G +P+ V+YN LI R + +E
Sbjct: 223 ITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFG 282
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+L + EP+V T N + +++ + + G++P T+ + +D KAG
Sbjct: 283 SVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E +++ M + +V++N VI+ + + + E L M ++ P+ ++
Sbjct: 343 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 402
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY------GRLKCFAEMKGVL 296
+L+ AGK +K + + + + V +N LVD GR+K E +
Sbjct: 403 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK---EAITLF 459
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ M ++G PD VTY ++ G + A+ +E
Sbjct: 460 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 498
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 144/337 (42%), Gaps = 5/337 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A ++F V G + ++ AL++ + ++ D+A +L+ M + PDV
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV-SESLVPDV 190
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLV 122
TY+ L+ K D+ + L+ D +G PN +TY+TLI R + L
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLE 247
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM+ C+PD+ + N + + K + G +P + T+NIL+D K
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + K+ +TY + ID +AG ++ + + M + P V+
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + ++ +L ++ + + FN L+ R + + + M +R
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G KP VTY +V + KE L + M E
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 11/307 (3%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
LL + +SG +KA +E + C D++T++I I +A Q + M
Sbjct: 22 LLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISGLCRASRIGDAQTVFDGMRKH 79
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G PN +TYN L+ ++ + +M+ PDV T N L F G++D
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K ++ G P + T+N L++ + KA ++ +++ M +VTYN +++
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDI 269
+ G + + L+ + P+ +T +L+ G + +L S + ++ +
Sbjct: 200 LCKNGRVDEARM---LIVDKGFSPNVITYSTLIS--GLCRELRRLESARQLLEKMVLNGC 254
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V +N L+ R + +E + + ++G +P+ TY ++ N A E
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314
Query: 330 -FQDLVE 335
F LV+
Sbjct: 315 LFSGLVK 321
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T+ LR+ SG+I+ + E+ G+ I+TFNI + +A V
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+K+ + +TYN ++ G + + L+ M P VT +L+ +
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 251 AGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G KL L+ D + + D V +N L++ + + E + +L+ M PD
Sbjct: 133 VG---KLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189
Query: 308 KVTYRTMVRAYSTNGMKNHAK 328
VTY ++V NG + A+
Sbjct: 190 VVTYNSLVNGLCKNGRVDEAR 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A L M +GC N SF L+ R+G + KA + + M +
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR-GVK 430
Query: 61 PDVNTYSILIKSCLKAFAFDKVQ---ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P V TY+IL+ KA +++ L M +G P+ VTY+ LID G+A +
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 490
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M ++ C P+V+T N + ++D + + G P T+ ++ +
Sbjct: 491 RRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISA 550
Query: 178 YGKAGHFEKMSAVME 192
K +K A+ +
Sbjct: 551 LCKQEMVDKALALFD 565
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A + + M ++GC + S A+++ + D+A LL M+ C
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME-AKGCS 395
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-- 118
P+ +++ LI +A + K +M +G++P VTYN L+D +A+ ++
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 119 LTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+TL M+ + PDV T + + G +G++D + ++ G P++ T+N L+
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ + M + +TY +I A
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS---GLFDKAFSLLEHMKNTP 57
G+C+ + +KA F+ M+ G ++ L+ ++ G +A +L + M
Sbjct: 407 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 466
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAE 116
PDV TYS LI KA D + LL M +G PN TYN+LI G K+
Sbjct: 467 RV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEA 525
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+EL V M+ + C PD T + A +D ++ AG+ P+ + L+D
Sbjct: 526 LEL-FVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584
Query: 177 S 177
Sbjct: 585 G 585
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A L AM +GC N ++ +L+S D+A L M C P
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK-GCVP 539
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
D TY +I + K DK AL G+ P + Y +LID
Sbjct: 540 DTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDG 585
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 38/345 (11%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---------------- 55
H LF M + +++ L++ +G+ GLFD A S L+ M+
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIEL 60
Query: 56 ------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN 97
PD+ Y+ +I KA F + ++L+S+M T G+ PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 98 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
T +Y+TL+ Y K F E +M C D+ T N + +G G +K +
Sbjct: 121 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 240
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ ++ L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F
Sbjct: 241 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQ 300
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ AY R A K +L ++ +PD + T + + G
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 341
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 95 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 153
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 154 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 213
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 214 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 274 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + + F ++ + K +A + V + M+
Sbjct: 330 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMR 389
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 390 GLGYFPDSNVIAVVLNAY 407
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 167 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 225
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 226 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 285
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 286 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 341
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G ++ E + L+ + + V +
Sbjct: 342 RIEEATYV---------------FRQAIDA-GEVKNIAVFERMIHLLSKYKKYANVVEVF 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 386 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 426
Query: 303 GC 304
GC
Sbjct: 427 GC 428
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 121/247 (48%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK +Q +KA E++ M + +F AL+SA G++ +A + M P
Sbjct: 503 FGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTP 562
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D ++Y+ LI +C K+ F K + +M T+GIRP TVT+N LI R+ A +
Sbjct: 563 DRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIV 622
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML E PD +TMN + A + T + EKF+ G+ P TFN +D+ GK
Sbjct: 623 DLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKL 682
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
EKM ++ M+ S + VT N ++ GR G + ME F + +R++P VT
Sbjct: 683 DSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTF 742
Query: 242 CSLVRAY 248
L+ Y
Sbjct: 743 SLLIENY 749
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 168/393 (42%), Gaps = 82/393 (20%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ ++ +A M +E N +++AL+ G+ GL +A S M + P
Sbjct: 322 LGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAP 381
Query: 62 DVNTYSILIKSCLKAFAFD-----KVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----- 111
+ TY+ +IK + D + +LL +M+T+G P+ VTY TLIDA+ +
Sbjct: 382 NTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPER 441
Query: 112 --KMFAEMELTLVK----------------------------MLSEDCEPDVWTMNCTLR 141
K+F EM+ VK M E PDV+ N +
Sbjct: 442 ALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALID 501
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYS 200
FG Q+D + Y++ + IQP TFN L+ + GKA + + A+ + + Y +
Sbjct: 502 GFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLT 561
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+YN +IDA G++GD + +F MR++ I+P VT +L+ YG A + L +
Sbjct: 562 PDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALI--YG-ASRSHDLAAS 618
Query: 261 LRFID-------NSD-------------------------------IMLDTVFFNCLVDA 282
+ +D N D + D V FN +DA
Sbjct: 619 FKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA 678
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
G+L +M +L M+ RG P KVT T+V
Sbjct: 679 VGKLDSSEKMFELLSEMESRGISPSKVTLNTIV 711
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 10/326 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+PE+A +LFQ M + N +++L+SA+ R+G ++A ++ E M + PDV +
Sbjct: 438 EPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHE-RIVPDVFAF 496
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-----MFAEMELTL 121
+ LI K DK + M I+P+ +T+N LI A G+AK + A ++T
Sbjct: 497 NALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTE 556
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ L+ PD + N + A G SG + +E+ ++ GI+P TFN L+ ++
Sbjct: 557 IYGLT----PDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRS 612
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+++ M + + T N +I A R DL + + + P VT
Sbjct: 613 HDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTF 672
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + A G EK+ +L +++ I V N +V GR M+ + +
Sbjct: 673 NTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHE 732
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +PD VT+ ++ Y ++ + + A
Sbjct: 733 KRLEPDSVTFSLLIENYVSHHLLDKA 758
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 47/264 (17%)
Query: 98 TVTYNTLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
T +N +DA G+A+ +M L+ M S + + DV + + + A G + E+
Sbjct: 277 TRNWNYTMDALLKGGKARECLDMFLS---MPSNEVKRDVASWSIYITALGRLERYSEAER 333
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAG-------HFEKMS-------------AVMEYM 194
+ IQP+I T++ L+++ GK G F +MS AV++ +
Sbjct: 334 SLIWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIV 393
Query: 195 QKYHYS---------------------WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+ + +VTY +IDAF + + ++ LF+ M+
Sbjct: 394 SRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEAN 453
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+KP+ SL+ A+ AG E+ ++ + + I+ D FN L+D +G+L+ +
Sbjct: 454 VKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAF 513
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRA 317
+ + M++ +PD++T+ ++ A
Sbjct: 514 EIYDRMRKLQIQPDRITFNALISA 537
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 38/176 (21%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+ EG + + + L+SA R AF +LE K PD T++ I + K
Sbjct: 625 MLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQL-GVHPDNVTFNTFIDAVGKLD 683
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ +K+ LLS+M ++GI P+ VT NT++ GR
Sbjct: 684 SSEKMFELLSEMESRGISPSKVTLNTIVGCCGR--------------------------- 716
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
G+ID ME+ + F ++P TF++L+++Y H AV+ Y
Sbjct: 717 --------RGKIDLMERGFHMFHEKRLEPDSVTFSLLIENY--VSHHLLDKAVIAY 762
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N +D+ K G + + M + +++I I A GR + E MR
Sbjct: 280 WNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWMR 339
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD-IMLDTVFFNCLVDAYGRLK-- 287
E I+P+ T +L+ G G + S R + D I +TV +N ++ R K
Sbjct: 340 EEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRN 399
Query: 288 ---CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+L M +GC PD VTY T++ A+S A K FQ++ E
Sbjct: 400 DCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKE 451
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 1/326 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVN 64
+ E L M D GC N S+ ++ + +A +++ M K C PDV
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 265
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+++ +I K K L+++M +G+ P+ VTYN+++DA +A+ + EL L +M
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ + EPD T + + SG K + K S G+ P I TFN + S K G
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + +YM + +V+Y+I++ + G M LF M + I +C L
Sbjct: 386 KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL 445
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ A+ G ++ V + + D V ++ L+ A+ R+ A+ M G
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
+P+ V Y +++ + +G AKE
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKEL 531
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 2/307 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+ LF +M D+G AN F L+SA+ + G+ D+A + M+ +PDV TYS LI
Sbjct: 424 NNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ-GVRPDVVTYSTLIS 482
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-E 130
+ + S M + G+ PNTV Y++LI + + + + +M+S+
Sbjct: 483 AFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPR 542
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ + + + N G++ + G +P+I TFN L+D Y G EK V
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M +VTYN ++ + ++G + LFR M +++KP+ VT ++ H
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ + + +S +D + L+ R E + + CK D
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722
Query: 311 YRTMVRA 317
T++ A
Sbjct: 723 LNTVINA 729
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 2/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + + MVD+G + + ++TA++ Y SG + ++ + M + P
Sbjct: 309 LCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKM-TSKGLIP 367
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T++ + S K + + M+T+G P+ V+Y+ L+ Y FA+M
Sbjct: 368 GIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLF 427
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + + N + A G +D + + Q G++P + T++ L+ ++ +
Sbjct: 428 HSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRM 487
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCVT 240
G M V Y+ +I F GDL + + L M S+ I +P+ V
Sbjct: 488 GRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVF 547
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ + + G+ V + + V FN L+D Y + + GVL+ M
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 607
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
G +PD VTY T+V Y +G
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSG 629
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 2/338 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A E+FQ M +G + S++ LL Y G F +L M +
Sbjct: 379 LCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK-GIVA 437
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + ++ILI + K D+ + ++M QG+RP+ VTY+TLI A+ R A+
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSYGK 180
+M+S EP+ + + F G + ++ + S GI +P+I F+ ++ S
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCN 557
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G V + TIVT+N +ID + G +++ + M S I+P VT
Sbjct: 558 EGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 617
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV Y +GK + + R + + + TV ++ ++D + K + M
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
G D TY+ +++ N + + A + MD
Sbjct: 678 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 20/331 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRS----------GLFDKAFSLLEHMKNTPD 58
+ AH LF ++ +G + + L+A R+ L F+ + + P
Sbjct: 91 DDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 150
Query: 59 CQP-DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE- 116
P V+TY IL+ C +A D A + + G+R T+ NT + AK E
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAG-IQPSINTFNIL 174
+++ L +M C P+ + N +++ G+S + ++ + G P + +FN +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ + K G K ++ M + +VTYN ++DA +A + + E + R M + +
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAE 291
+P +T +++ Y +G ++ + R + + ++ V FN + + +GR K +
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK---D 387
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + M +G PD V+Y ++ Y+T G
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILLHGYATEG 418
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E F M+ G + NT + +L+ + G KA L+ M + +P++ +S +I
Sbjct: 493 AMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSII 552
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S + + + G RP VT+N+LID Y + L M+S E
Sbjct: 553 HSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 612
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T N + + SG+ID + + ++P+ T++I+LD AG +
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + I TY I++ R + LF + + K L +++ A
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ E+ + I S ++ + + ++ + E + M++ GC P
Sbjct: 733 VRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRL 792
Query: 311 YRTMVR 316
++R
Sbjct: 793 LNDIIR 798
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
AH++F ++ G +F +L+ Y G +KAF +L+ M + +PDV TY+ L+
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTYNTLV 622
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ D L +M + ++P TVTY+ ++D A + + +M+
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T L+ + D + K + + I N ++++ K E+ + +
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + TY ++I + G +++ + +F M PS L ++R
Sbjct: 743 FAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 802
Query: 251 AGKPEKLGSVLRFIDNSDIMLD 272
G K G + +D + I L+
Sbjct: 803 KGDIVKAGYYMSKVDGTIISLE 824
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F M+D G + ++ LL R+ L D+A +L H DC+ D+ + +I
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF-HKLGAMDCKFDITILNTVI 727
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K ++ L + +ST G+ PN TY +I + E + M C
Sbjct: 728 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCA 787
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKM 187
P +N +R G I K I +T ++L+ + G H E++
Sbjct: 788 PSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQI 845
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 38/345 (11%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---------------- 55
H LF M + +++ L++ +G+ GLFD A S L+ M+
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIEL 60
Query: 56 ------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN 97
PD+ Y+ +I KA F + ++L+S+M T G+ PN
Sbjct: 61 SRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 98 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
T +Y+TL+ Y K F E +M C D+ T N + +G G +K +
Sbjct: 121 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 240
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ ++ L + M+S ++P+ +T +++ +G GK ++ + + + +S + +D + F
Sbjct: 241 EHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQ 300
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ AY R A K +L ++ +PD + T + + G
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 341
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 95 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 153
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 154 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 213
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS G++P+ T++ ++ +GK
Sbjct: 214 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 274 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 330 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMR 389
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 390 GLGYFPDSDVIAIVLNAY 407
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 41/313 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 167 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 225
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++G+ PN++TY+T+I +G+ +
Sbjct: 226 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQ 285
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 286 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 341
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + + +
Sbjct: 342 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVIEVF 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 386 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 426
Query: 303 GCK-PDKVTYRTM 314
GC D+V ++ +
Sbjct: 427 GCVFSDQVHFQML 439
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 1/314 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+AH L M +G + S++ +++ Y R G DK + L+E MK +P+ TY +
Sbjct: 687 EAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYTYGSI 745
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + + S+M QGI P+T+ Y TL+D + + +M S D
Sbjct: 746 IGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDI 805
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV T + F G + K + + G++P I TF L++ Y KAGH +
Sbjct: 806 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFR 865
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V +M + S +VTY +ID + GDL L M ++P+ T S+V
Sbjct: 866 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 925
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G E+ ++ + + + DTV + L+DAY + + + +L M +G +P V
Sbjct: 926 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985
Query: 310 TYRTMVRAYSTNGM 323
T+ ++ + +GM
Sbjct: 986 TFNVLMNGFCLHGM 999
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 3/330 (0%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
CK E A E F M+ +G +T +T L+ + + G A M ++ D PDV
Sbjct: 753 CKLAE-AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVL 810
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ +I + + L +M +G+ P+ +T+ L++ Y +A + M
Sbjct: 811 TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHM 870
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C P+V T + G +D+ + + G+QP+I T+N +++ K+G+
Sbjct: 871 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 930
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ ++ + + VTY ++DA+ ++G++ + + + M + ++P+ VT L
Sbjct: 931 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVL 990
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G E +L ++ I + FNCLV Y + + M RG
Sbjct: 991 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV 1050
Query: 305 KPDKVTYRTMVRAY-STNGMKNHAKEFQDL 333
+PD TY +V+ + + MK FQ++
Sbjct: 1051 EPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M+ G + + +FT L++ Y ++G AF + HM C P+V TY+ L
Sbjct: 827 EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA-GCSPNVVTYTTL 885
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D LL +M G++PN TYN++++ ++ E + + +
Sbjct: 886 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T + A+ SG++D ++ + G+QP+I TFN+L++ + G E
Sbjct: 946 NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ +M + T+N ++ + +LK +++ M S ++P T +LV+ +
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+A ++ + + + + ++ L+ + + K F E + + + M++ G DK
Sbjct: 1066 NARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADK 1124
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWTIV 204
G + K +EK + G+ S+++ N+ L K + + +A++ + + + W +
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCN-KTATAIIVFREFPEVGVCWNVA 670
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+YNIVI + G + + +L LM + P ++ +++ Y G+ +K+ ++ +
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ + ++ R+ AE + M +G PD + Y T+V + G
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 325 NHAKEF 330
A +F
Sbjct: 791 RAASKF 796
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 3/175 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E KA E+ M+ +G +F L++ + G+ + LL M P+
Sbjct: 960 CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPN 1018
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ L+K A+ DM ++G+ P+ TY L+ + A+ E
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M + V T + ++ F + + +++ + G+ F+ D+
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDT 1133
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 155/316 (49%), Gaps = 10/316 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M + GC +F L+ YG+ G +++ LLE M QP+ T +I
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNI 465
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LTLVKMLSE 127
L+++ ++ ++ M + G++P+ VT+NTL AY R E + + +ML
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHN 525
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P+V T + + G+++ + + + + G+ P++ FN L+ + + +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+++ +VT++ +++A+ GD+K+ E ++R M I P L +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKG 645
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQR---- 302
Y AG+PEK +L + + + V + ++ + C A EMK ++V +
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW----CSAGEMKKAMQVYNKMRGSV 701
Query: 303 GCKPDKVTYRTMVRAY 318
G P+ TY T++ +
Sbjct: 702 GLSPNLTTYETLIWGF 717
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 152/334 (45%), Gaps = 7/334 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++AH +F +++EG + ++T L++A R F SL+ ++ +PD +
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKN-GLRPDTILF 392
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + ++ D+ + M G +P T+NTLI YG+ E L ML
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLR 452
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-- 183
++ +P+ T N ++A+ N +I+ K QS G++P TFN L +Y + G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTC 512
Query: 184 -FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E M ++ M + T +++ + G +++ F M+ + P+
Sbjct: 513 TAEDM--IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL++ + + + +G V+ ++ + D V F+ L++A+ + + + M +
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEG 630
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD + + + Y+ G A++ + + K
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + + L+ ++ + ++ + + +G +P+ +TY TL+ A R K F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K+ PD N + A SG +D K +EK + +G +P+ +TFN L+ YGK
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 182 GHFEKMSAVMEYM-----------------------QKYHYSWTI-------------VT 205
G E+ S ++E M +K +W I VT
Sbjct: 438 GKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVT 497
Query: 206 YNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF- 263
+N + A+ R G E + M ++KP+ T ++V Y GK E+ LRF
Sbjct: 498 FNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE---ALRFF 554
Query: 264 --IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + FN L+ + + + V+++M++ G KPD VT+ T++ A+S+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 322 G-MKNHAKEFQDLVE 335
G MK + ++D++E
Sbjct: 615 GDMKRCEEIYRDMLE 629
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ M+ N ++ +++ Y G ++A MK P++ ++ LIK
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL-GVHPNLFVFNSLIKGF 576
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L D V ++ M G++P+ VT++TL++A+ E ML +PD+
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDI 636
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + +G+ + E+ + + G++P++ + ++ + AG +K V
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNK 696
Query: 194 MQ-KYHYSWTIVTYNIVIDAFGRA 216
M+ S + TY +I FG A
Sbjct: 697 MRGSVGLSPNLTTYETLIWGFGEA 720
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ E+++ M++ G D + +F+ L Y R+G +KA +L M+ +P+V Y+
Sbjct: 618 KRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF-GVRPNVVIYTQ 676
Query: 69 LIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAK 112
+I A K + + M + G+ PN TY TLI +G AK
Sbjct: 677 IISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEAK 721
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 155/326 (47%), Gaps = 21/326 (6%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A E+F + Q + A++ Y RSG F KA LL+ M+ C
Sbjct: 200 VLGRWNQESLAVEIF-TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQR-GCV 257
Query: 61 PDVNTYSILIKSCLKAFAF--DKVQALLSDMSTQGIRPNTVTYNTLIDA-------YGRA 111
PD+ +++ LI + LK+ + V LL + G+RP+ +TYNTL+ A G
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAV 317
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
K+F +ME + C+PD+WT N + +G G E+ + + + G P T+
Sbjct: 318 KVFEDME-------AHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTY 370
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR- 230
N LL ++ + + EK+ V + MQK + +TYN +I +G+ G L L++ M+
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 231 -SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
S R P +T L+ + G A + + +++ + + I ++ L+ Y +
Sbjct: 431 LSGR-NPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMV 315
E + M + G KPD + Y M+
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 163/374 (43%), Gaps = 48/374 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+C E+A +F M+ +G +S LL A G ++ + ++E ++ D
Sbjct: 798 AECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQ---DMGFK 854
Query: 63 VNTYSILIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
++ SIL+ L AFA +V + S M G P Y +I+ + K + E
Sbjct: 855 ISKSSILL--MLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + +M + + ++ N L+ + + Y++ + +G++P T+N L+ Y
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMY 972
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF------------ 226
+ E+ ++M+ M+ + TY +I AFG+ L+Q E LF
Sbjct: 973 CRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 227 -----------------------RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
++M++ I+P+ T+ L+ +Y +G P++ VL
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN 1092
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ N+++ L T+ ++ ++DAY R K + L M++ G +PD + VRA S +
Sbjct: 1093 LKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKE 1152
Query: 324 KNHA----KEFQDL 333
K+ K QD+
Sbjct: 1153 KSEVMLLLKALQDI 1166
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 158/326 (48%), Gaps = 6/326 (1%)
Query: 8 PEKAHELFQAMVDEGCD-ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
PE A+++ +G A + +T ++ AYG+ L+ KA S++ +++ + PD+ T+
Sbjct: 732 PETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRT-PDLKTW 790
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ + + +++ +A+ + M G P + N L+ A E+ + + ++
Sbjct: 791 NSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQD 850
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ ++ L AF +G I + K Y ++AG P+I + ++++ K
Sbjct: 851 MGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M++ ++ + +N ++ + D K+ +++ ++ ++P T +L+
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLII 970
Query: 247 AYGHAGKPEKLGSVLRFIDNS--DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
Y +PE+ S+++ + N D LDT + L+ A+G+ KC + + + E + +G
Sbjct: 971 MYCRDRRPEEGYSLMQQMRNLGLDPKLDT--YKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
K D+ Y TM++ +G + A++
Sbjct: 1029 KLDRSFYHTMMKISRDSGSDSKAEKL 1054
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 150/331 (45%), Gaps = 7/331 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---DCQPDVNTY 66
+A ++F + GC+ + +++ Y + G + A+ ++ + C P Y
Sbjct: 699 EASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSP---MY 755
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I++ K + K ++++ ++ G P+ T+N+L+ AY + M+
Sbjct: 756 TDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMR 815
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P V ++N L A G+++ + E+ Q G + S ++ ++LD++ +AG+ +
Sbjct: 816 DGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ + M+ Y TI Y ++I+ + ++ E + M K S+++
Sbjct: 876 VNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y +K V + I S + D +N L+ Y R + E +++ M+ G P
Sbjct: 936 MYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDP 995
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY++++ A+ A++ F++L+ K
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 151/344 (43%), Gaps = 19/344 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++F+ M C + ++ A++S YGR GL +A L ++ PD TY+
Sbjct: 314 EGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELE-LKGFSPDAVTYNS 372
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + + +KV+ + M G + +TYNT+I YG+ + +L L L +D
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK-----QGQLDLALQLYKD 427
Query: 129 CE------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ PD T + + G + + + GI+P++ T++ L+ Y KAG
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ M + + Y++++D R + ++ L+R M S+ PS
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYE 547
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ + + + +R ++ M + LV +CF L+V
Sbjct: 548 LMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLVKG----ECFDLAARQLKVAITN 603
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
G + + T +++ +YS++G H++ F+ L+E + E KR
Sbjct: 604 GYELENDTLLSILGSYSSSG--RHSEAFE-LLEFLKEHASGSKR 644
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 3/248 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ A + M + + ++L Y + K + + +K + +
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKES-GLE 959
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI + ++ +L+ M G+ P TY +LI A+G+ K + E
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++LS+ + D + ++ +SG EK + ++AGI+P++ T ++L+ SY
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCV 239
+G+ ++ V+ ++ T + Y+ VIDA+ R+ D K +E L M+ E ++P
Sbjct: 1080 SGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLE-MKKEGLEPDHR 1138
Query: 240 TLCSLVRA 247
VRA
Sbjct: 1139 IWTCFVRA 1146
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/380 (15%), Positives = 137/380 (36%), Gaps = 72/380 (18%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD------------ 58
A + + G + + ++L +Y SG +AF LLE +K
Sbjct: 593 AARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIV 652
Query: 59 ------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
C Y L+ C+ + + + S++ G
Sbjct: 653 LHCKVNNIGAALDEYLADPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGC 712
Query: 95 RPNTVTYNTLIDAY------------------------------------GRAKMFAEME 118
P+ +++ Y G+ K++ + E
Sbjct: 713 EPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAE 772
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + PD+ T N + A+ G + + G P++ + N LL +
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHAL 832
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G E++ V+E +Q + + + +++DAF RAG++ ++ ++ M++ P+
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTI 892
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ + ++ ++ ++ ++ +N ++ Y ++ + + V +
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQR 952
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
+++ G +PD+ TY T++ Y
Sbjct: 953 IKESGLEPDETTYNTLIIMY 972
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
Query: 168 INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ--MEYL 225
+ +N ++ Y ++G F K +++ M++ ++++N +I+A ++G L + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVEL 284
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++R+ ++P +T +L+ A E V ++ D +N ++ YGR
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
AE + + ++ +G PD VTY +++ A++ KE ++KM
Sbjct: 345 CGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 132 bits (331), Expect = 3e-28, Method: Composition-based stats.
Identities = 91/327 (27%), Positives = 150/327 (45%), Gaps = 20/327 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDA------NTQSFTALLSAYGRSGLFDKAFSLLEHMKN 55
LGK P + +LF + G + + +FT+++S +A +L E M++
Sbjct: 260 LGKGGLPHRGAQLFDLLRRLGPGSPLAPLLDEFTFTSMISNCVAQQDLGRAMALAEEMRD 319
Query: 56 TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
+ +V+T+S L+ C+K + + DM G N VTYNTLID YG++ +
Sbjct: 320 R-GIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWE 378
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
E L +M E +P T N + A S Q + YE+ ++ P+ T+N L+
Sbjct: 379 EALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALI 438
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
++ K G K+ AV + M + +++TY+ +I A +AG+ K LF MR E
Sbjct: 439 SAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCV 498
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKC 288
P+ ++ SL+ A + EK V + D V + L+ AY R L
Sbjct: 499 PNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRRALAA 558
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMV 315
F EM ++ R C PD + Y T++
Sbjct: 559 FEEM------IRARPCAPDSIVYNTII 579
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 46/328 (14%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-----DVNTYSILIKSCLKAFAFD 80
+++ ++ G+ GL + L + ++ P D T++ +I +C+
Sbjct: 249 DSRGLAMVIKDLGKGGLPHRGAQLFDLLRRLGPGSPLAPLLDEFTFTSMISNCVAQQDLG 308
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ AL +M +GI N T++ L++ + + M + C +V T N +
Sbjct: 309 RAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLI 368
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+G SGQ + E+ + IQP TFN L+ + + +++ V E M +
Sbjct: 369 DVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHP 428
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
TYN +I A + GDL ++ +F+ M + + S +T SL+ A AG+ KL
Sbjct: 429 PNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGE-WKLA-- 485
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
L+ F EM+G GC P+ ++Y +++ A +
Sbjct: 486 -------------------------LQLFEEMRG-------EGCVPNVISYNSLITACAQ 513
Query: 321 NGMKNHAKEFQDLVEKMDETCLAMKRPD 348
A E + +++ + C RPD
Sbjct: 514 GAQWEKAAEVFEQMQR--QGC----RPD 535
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF+ M EGC N S+ +L++A + ++KA + E M+ C+PDV +Y+ LI
Sbjct: 485 ALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQ-GCRPDVVSYTALI 543
Query: 71 KSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLID 106
++ + + + A +M + P+++ YNT+ID
Sbjct: 544 QAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTIID 580
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 1/310 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M +GC + ++ L++ + G D+A L +M + C+P+V T++I+
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCKPNVITHNII 319
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LLSDM +G P+ VT+N LI+ R ++ L KM C
Sbjct: 320 LRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 379
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + E S G P I T+N LL + K G +
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVE 439
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G + L MR + +KP +T +L+R G
Sbjct: 440 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLG 499
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ + ++ I V +N ++ + + + L M ++GCKP +
Sbjct: 500 REGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEA 559
Query: 310 TYRTMVRAYS 319
TY ++ +
Sbjct: 560 TYTILIEGIA 569
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 36/366 (9%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-- 58
G C+ + +KA + + + + G + ++ L+ Y +SG DKA +LE M PD
Sbjct: 150 GFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVV 209
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
C PDV TY+ILI++ + LL +M
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G +P+ VTYN LI+ + E L M S C+P+V T N LR+ ++G+
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRW 329
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
E+ G PS+ TFNIL++ + + V+E M K+ ++YN +
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389
Query: 210 IDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ F + + + +EYL +M S P VT +L+ A GK + +L + +
Sbjct: 390 LHGFCQEKKMDRAIEYL-EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA- 327
+ +N ++D ++ +LE M+++G KPD +TY T++R G + A
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 328 KEFQDL 333
K F D+
Sbjct: 509 KIFHDM 514
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 130/325 (40%), Gaps = 35/325 (10%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G ++ LE M D PDV + LI+ ++ K ++ + G P+
Sbjct: 118 RNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176
Query: 99 VTYNTLIDAYGRA---------------------------------KMFAEMELTLVKML 125
+TYN LI Y ++ K+ ME+ L + L
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEV-LDRQL 235
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+C PDV T + A N + K ++ + G +P + T+N+L++ K G +
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + M Y ++T+NI++ + G E L M + PS VT L+
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ VL + + +++ +N L+ + + K LE+M RGC
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
PD VTY T++ A +G + A E
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEI 440
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ N LR +G+++ K E+ G P + L+ + ++G +K + +ME
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ ++TYN++I + ++G++ K +E L R+ + P VT +++R+ +G
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM----SVAPDVVTYNTILRSLCDSG 222
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ VL + D + + L++A + +L+ M+++GCKPD VTY
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282
Query: 313 TMVRAYSTNGMKNHAKEF 330
++ G + A +F
Sbjct: 283 VLINGICKEGRLDEAIKF 300
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E A EL + M +G + +++ LL GR G D+A + M+ +P
Sbjct: 463 LTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL-SIKP 521
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
TY+ ++ KA + L+ M +G +P TY LI+
Sbjct: 522 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 4/328 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++G+ Q A LF M + GC +T + +L+ + +S KA E MK
Sbjct: 117 VMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHSRDKSKALAKALGYFEKMKTI 176
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
CQP++ TY+IL+++ +A ++ L D+ + P+ TYN ++DAYG+ M E
Sbjct: 177 DRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGMITE 236
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME LV+M S C PDV T N + ++G D ME+ ++ + +P+ TFN ++
Sbjct: 237 MESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPTFNSMIT 296
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V++ M + + VT +I + + + +F + S +
Sbjct: 297 NYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQIFDELVSSQNNV 356
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
++ +++ AY G P + +L + + + L AY + ++ +L
Sbjct: 357 HLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLIQKLL 416
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ M +G P+K + + A+ K
Sbjct: 417 KRMNSQGIVPNKKFFLDALEAFGNTDKK 444
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL----KAFAFD 80
A+ ++ L+S GR G A L M+N+ C+PD + Y+ LI + L K+ A
Sbjct: 106 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS-GCRPDTSVYNSLIGTHLHSRDKSKALA 164
Query: 81 KVQALLSDMST-QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
K M T +PN VTYN L+ A+ +A ++++ + PD++T N
Sbjct: 165 KALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGV 224
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ A+G +G I ME + +S +P + TFNIL+DSYG+ F+KM V + + +
Sbjct: 225 MDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKE 284
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T T+N +I +G+A ++ E + M KP+ VT L+ Y + +
Sbjct: 285 KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQ 344
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + +S + N ++DAY E +L+ + ++G P TY+ + +AY+
Sbjct: 345 IFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYT 404
Query: 320 TNGMKNHAKEFQDLVEKMD 338
N K Q L+++M+
Sbjct: 405 K---ANDKKLIQKLLKRMN 420
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 45/172 (26%)
Query: 190 VMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRS--------------- 231
V +MQK W + Y+ +I GR G ++ +LF MR+
Sbjct: 94 VFRWMQKQR--WYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIG 151
Query: 232 -------------------------ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+R +P+ VT L+RA+ AG ++L + + +D
Sbjct: 152 THLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDE 211
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
S + D +N ++DAYG+ EM+ VL M+ C+PD +T+ ++ +Y
Sbjct: 212 SPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSY 263
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G + ++A ++FQ MV +G + ++ L+ A+G++G ++AF + ++ +
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTN--- 236
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY+ L+ S + + L M +G+ N +TY LI+ G A ++
Sbjct: 237 EV-TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++M+ D + D+ T+N L +G+++ + ++ + G+ T+NIL++ G+A
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + A++ M++ + I+TYN +I ++G+ +L LF M+ + P+ V+
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ +G AG+ + S+ R + + V +N L+D R F L M+
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475
Query: 302 RGCKPDKVTYRTMVR 316
GC+ KVT +VR
Sbjct: 476 AGCQMGKVTKSLLVR 490
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 153/326 (46%), Gaps = 4/326 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q E+A +F M + ++T L+ + G G D L E M CQP
Sbjct: 110 LAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESM-TAQGCQP 168
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY ++ + A D+ + M +G++P+ VTYN LIDA+G+ ++E
Sbjct: 169 NLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKT---GQLERAF 225
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ + T N L + G G I + + + + ++ G+ + T+ IL++ G A
Sbjct: 226 DFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWA 285
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E + + M + IVT N V+D +AG ++ LF+ M+ + + VT
Sbjct: 286 GRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTY 345
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G AGK + G++L ++ + + + +N L+ +YG+ + + M++
Sbjct: 346 NILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKE 405
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
RG P+ V+Y +++ + G + A
Sbjct: 406 RGVAPNVVSYSSLIEGFGKAGRTDAA 431
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 160/386 (41%), Gaps = 68/386 (17%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG ++ + L ++M + +TQ F L+ YG + + +KA L +
Sbjct: 4 LLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTK-EGGR 62
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P TYS +I+ +K + M P+ T+N LID+ +A E
Sbjct: 63 PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + PDV+T +R+ G G+ID + K +E + G QP++ T++ ++ ++G
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF--------------------------- 213
AG ++ + + M + VTYNI+IDAF
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS 242
Query: 214 -----GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV-LRFIDNS 267
GR GD++ + LF M+++ + + +T L+ G AG+ E + + L +DN
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND 302
Query: 268 ---DIML-------------------------------DTVFFNCLVDAYGRLKCFAEMK 293
DI+ DTV +N L++ GR
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYS 319
+L M++ GC P+ +TY T++ +Y
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYG 388
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 3/244 (1%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+D VQ L+ M + +T +NTLI YG A M + TL E P +T +
Sbjct: 11 YDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSS 70
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
++ F G + Y++ A P TFNIL+DS KA E+ V M K +
Sbjct: 71 MIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLN 130
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
S + TY I+I + G G + + LF M ++ +P+ T S++ A+G AG+ ++
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + + + D V +N L+DA+G+ +++ + + + ++VTY +++ +
Sbjct: 191 DIFQQMVQKGLQPDAVTYNILIDAFGKT---GQLERAFDFVGKSRSFTNEVTYNSLLSSL 247
Query: 319 STNG 322
G
Sbjct: 248 GRKG 251
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 155/302 (51%), Gaps = 1/302 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+++ L++ +G+ GLFD A S L+ M++ + D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEHDR-VRGDLXLYSNLIELSRKLCDYSKAISIFSR 69
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ GI P+ V YN++I+ +G+AK+F E + +M + PD + L + + +
Sbjct: 70 LKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKK 129
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 130 FIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNT 189
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++ + A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + +
Sbjct: 190 LLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRG 249
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I + + ++ ++ +G++ + E ++ G + D+V Y+TM+ AY G+ +HAK
Sbjct: 250 IEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAK 309
Query: 329 EF 330
Sbjct: 310 RL 311
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 155/342 (45%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S+T LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M G+ PN V+YNTL+ Y A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + E ++ V Y +I A+ RAG + + L +++ P +
Sbjct: 267 VGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKT----PDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ ++ +G+ E+ V R ++ + D F ++D + + + ++ + V + M+
Sbjct: 323 RDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G PD ++ AY + + K +E DE C+
Sbjct: 383 GLGYFPDSNVIALVLNAYGK--LHDFEKANDVYLEMQDEGCV 422
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 35/271 (12%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMF-------AEME-----------LTLVKMLSEDCE--- 130
+ + P+ TY+TLI +G+ +F +ME L+++ + C+
Sbjct: 3 RALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSK 62
Query: 131 --------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD+ N + FG + + ++ G+ P ++ LL
Sbjct: 63 AISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLT 122
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR ++P
Sbjct: 123 MYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEP 182
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V+ +L+R Y A + + R + DI + V +N ++ YG+ + ++
Sbjct: 183 NVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ MQ RG +P+ +TY T++ + G + A
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRA 273
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + FG G D +K + ++ + ++ L++ K + K ++
Sbjct: 7 PDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISI 66
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+++ + +V YN +I+ FG+A ++ L MR+ + P V+ +L+ Y
Sbjct: 67 FSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVE 126
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K + SV + +LD N ++D YG+L E + M++ G +P+ V+
Sbjct: 127 NKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVS 186
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y T++R YS + A L+++ D
Sbjct: 187 YNTLLRVYSDAELFGEAXHLFRLMQRKD 214
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 160/359 (44%), Gaps = 37/359 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
++G+ EK E+F+ M + N +FTAL++AYGR+G ++ + LL MK +
Sbjct: 91 IMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKE-RVE 149
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNT---------------- 103
P++ TY+ ++ +C K ++ + L + M +GI+P+ +TYNT
Sbjct: 150 PNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAM 209
Query: 104 -------------------LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+D + + +E L +M E PD+ N + A+
Sbjct: 210 VFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYA 269
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
++G + +++ Q G P + T++ LL YG G FE++ ++ M++ T+
Sbjct: 270 DAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVA 329
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +I FG G ++ LF M +KP T +L+ G G + + + +
Sbjct: 330 TYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHM 389
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ L+ +YG++ + + +++ G P Y +++ Y+ G+
Sbjct: 390 LTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGL 448
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
Q F+ + + + +A L ++M+ C+P + Y+I+I + +K +
Sbjct: 47 QDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFE 106
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
DM ++ N + LI+AYGR + L +M E EP++ T N L A G
Sbjct: 107 DMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGG 166
Query: 148 -QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ + + + + GIQP + T+N LL + G E+ + V + M + VTY
Sbjct: 167 LDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTY 226
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++D F + L ++E L R M E P SL+ AY AG V + +
Sbjct: 227 KSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQR 286
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
D ++ L+ YG CF +++ + M++ P TY ++++ + G +
Sbjct: 287 GGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQE 346
Query: 326 HAKEFQDLVE 335
F D+V+
Sbjct: 347 SINLFHDMVD 356
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 37/352 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF M EG + ++ LLSA GL ++A + + M N D TY L+ +
Sbjct: 175 LFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTM-NESGVVADAVTYKSLVDTF 233
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +V+ LL +M +G P+ YN+LI+AY A +M C PDV
Sbjct: 234 AGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDV 293
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + LR +GN G + + + + P++ T+N L+ +G+ G+F++ +
Sbjct: 294 ETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHD 353
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG---- 249
M TY+ ++ GR G ++ + + M + PS L+ +YG
Sbjct: 354 MVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAM 413
Query: 250 ------------HAG-KPE------------------KLGSVLRFIDNSDIMLDTVFFNC 278
AG P+ + GS L ++ + N
Sbjct: 414 YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNS 473
Query: 279 LVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+++AY ++ E ++ E+ Q+ G + D+ T+ T++ Y G+ AKE
Sbjct: 474 VMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKE 525
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 160/319 (50%), Gaps = 2/319 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M + ++A E F+ M +G + + AL+ ++ GL ++A + M
Sbjct: 307 MRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMAKK-GAF 365
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y+ L+ + K+ ++V+ + ++M +G++P + T+N L+DAY R +E
Sbjct: 366 SNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEEL 425
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M +PD + C + A+G ++ D + + + GI+P+ +++ L+ +Y
Sbjct: 426 LLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYS 485
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G EK + E MQ +I TY ++DAF R+GD + + ++++M SE+++ + V
Sbjct: 486 VSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRV 545
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + G + V+ + + +N L++AY R +++ +L+ M
Sbjct: 546 TFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 605
Query: 300 QQRGCKPDKVTYRTMVRAY 318
KPD +TY TM+ AY
Sbjct: 606 ATLNLKPDSITYLTMIYAY 624
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 158/333 (47%), Gaps = 5/333 (1%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQPDV 63
C++ + A ++++AM + + + + +++ ++G K A+ E M N +
Sbjct: 275 CQRYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEFFEKM-NRKGVKWSP 333
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
L+KS ++ + +M+ +G N + YNTL+DAY ++ E+E +
Sbjct: 334 EILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAE 393
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ +P T N + A+ Q + +E+ + Q AG+QP ++ L+ +YG+
Sbjct: 394 MKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAYGRQNK 453
Query: 184 FEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
M+A M+K T +Y +I A+ +G ++ F M++E IKPS T
Sbjct: 454 MTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYT 513
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ A+ +G + L + + + + + V FN L+D + + + E + V+ +
Sbjct: 514 ALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGKL 573
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
G P +TY ++ AY+ G H+K Q L E
Sbjct: 574 GLHPTVMTYNMLMNAYARGG--QHSKLPQLLKE 604
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QPE EL M D G + +S+T L+SAYGR + D A + MK +P ++
Sbjct: 418 QPEIVEELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKV-GIKPTSHS 476
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K + +M T+GI+P+ TY L+DA+ R+ + M+
Sbjct: 477 YTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMM 536
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
SE E T N L F G +F G+ P++ T+N+L+++Y + G
Sbjct: 537 SEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHS 596
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K+ +++ M + +TY +I A+ R D ++ + + M
Sbjct: 597 KLPQLLKEMATLNLKPDSITYLTMIYAYIRVRDFRRAFFYHKTM 640
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+F+ M D G + +SFT L+ + R G ++A + + M++ +PD+ ++S
Sbjct: 182 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR-GIKPDLVSFSC 240
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + D A L +M G+ P+ V Y +I + RA + ++ +M+
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T N L ++ E + + G+ P + TF L+ Y G +K
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M IVTYN +ID R GDL + L+ M S I P+ VT L+ ++
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E L + N I+ + + +N ++ Y R ++ + L+ M PD
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 480
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+TY T++ Y + A + +++EK
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLNMMEK 508
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 36/359 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD------- 58
E+A ++++ M G + SF+ L+ + R G D A + L M+ PD
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 59 ------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
C PDV TY+ L+ K + LL++M +G+
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336
Query: 95 RPNTVTYNTLIDAYG-RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
P+ T+ TLI Y K+ ++L ML++ PD+ T N + G +D
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQL-FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ S I P+ T++IL+DS+ + G E ++ M I+TYN +I +
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G++ + + + M ++ P +T +L+ Y K +L ++ + D
Sbjct: 456 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 515
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V +N L++ + E + E M +G +PD+ TY +M+ + T G A + D
Sbjct: 516 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 574
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 38/361 (10%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ-PDVNTY 66
P A + ++ + + NT + ++ Y ++ FDK +++ M+ C PDV T+
Sbjct: 76 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR--CVFPDVVTH 133
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ + +A + AL+ M ++G++P VTYN+++ R+ M+ + +M
Sbjct: 134 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 193
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PDV + + F G+I+ K Y++ + GI+P + +F+ L+ + + G +
Sbjct: 194 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDH 253
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG----------------------------- 217
A + M+ + V Y +VI F RAG
Sbjct: 254 AMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 313
Query: 218 ------DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
L E L MR + P T +L+ Y GK +K + + N +
Sbjct: 314 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
D V +N L+D R + + + M R P+ VTY ++ ++ G A F
Sbjct: 374 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 433
Query: 332 D 332
D
Sbjct: 434 D 434
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+F+ M D G + +SFT L+ + R G ++A + + M++ +PD+ ++S
Sbjct: 243 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR-GIKPDLVSFSC 301
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + D A L +M G+ P+ V Y +I + RA + ++ +M+
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T N L ++ E + + G+ P + TF L+ Y G +K
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M IVTYN +ID R GDL + L+ M S I P+ VT L+ ++
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E L + N I+ + + +N ++ Y R ++ + L+ M PD
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+TY T++ Y + A + +++EK
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLNMMEK 569
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 36/359 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD------- 58
E+A ++++ M G + SF+ L+ + R G D A + L M+ PD
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 59 ------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
C PDV TY+ L+ K + LL++M +G+
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 95 RPNTVTYNTLIDAYG-RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
P+ T+ TLI Y K+ ++L ML++ PD+ T N + G +D
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQL-FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ S I P+ T++IL+DS+ + G E ++ M I+TYN +I +
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G++ + + + M ++ P +T +L+ Y K +L ++ + D
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 576
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V +N L++ + E + E M +G +PD+ TY +M+ + T G A + D
Sbjct: 577 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 635
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 38/361 (10%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ-PDVNTY 66
P A + ++ + + NT + ++ Y ++ FDK +++ M+ C PDV T+
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR--CVFPDVVTH 194
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ + +A + AL+ M ++G++P VTYN+++ R+ M+ + +M
Sbjct: 195 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 254
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PDV + + F G+I+ K Y++ + GI+P + +F+ L+ + + G +
Sbjct: 255 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDH 314
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG----------------------------- 217
A + M+ + V Y +VI F RAG
Sbjct: 315 AMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 374
Query: 218 ------DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
L E L MR + P T +L+ Y GK +K + + N +
Sbjct: 375 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
D V +N L+D R + + + M R P+ VTY ++ ++ G A F
Sbjct: 435 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 494
Query: 332 D 332
D
Sbjct: 495 D 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E A M+++G N ++ +++ Y RSG K L+ M PD+ TY
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITY 544
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +K LL+ M + ++P+ VTYN LI+ + E KM +
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+ EPD +T + +G + +++ G P
Sbjct: 605 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
K + Q M+ + ++ L+ Y + AF LL M+ QPDV TY++L
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNML 582
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + M +GI P+ TY ++I+ + A E +ML
Sbjct: 583 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 642
Query: 130 EPD 132
PD
Sbjct: 643 APD 645
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 1/310 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M +GC + ++ L++ + G D+A L +M CQP+V T++I+
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP-LYGCQPNVITHNII 320
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LL+DM +G P+ VT+N LI+ R ++ L KM C
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 380
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + E S G P I T+N LL + K G +
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G + L MR + +KP +T +L+R G
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ + ++ I V +N ++ + + + L M ++GCKP K
Sbjct: 501 CEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560
Query: 310 TYRTMVRAYS 319
TY ++ +
Sbjct: 561 TYTILIEGIA 570
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 157/357 (43%), Gaps = 34/357 (9%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD----------- 58
KA + + + + G + ++ L+ Y +SG DKA +LE M PD
Sbjct: 160 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSL 219
Query: 59 --------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
C PDV TY+ILI++ + LL +M +G +P+
Sbjct: 220 CDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDV 279
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
VTYN LI+ + E L M C+P+V T N LR+ ++G+ E+
Sbjct: 280 VTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLAD 339
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
G PS+ TFNIL++ + + V+E M K+ ++YN ++ F +
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 219 L-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ + +EYL +M S P VT +L+ A GK + +L + + + +N
Sbjct: 400 MDRAIEYL-EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
++D ++ +LE M+++G KPD +TY T++R G + A K F D+
Sbjct: 459 TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 39/327 (11%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G ++ LE M D PDV + LI+ ++ K ++ + G P+
Sbjct: 119 RNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDV 177
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTME---- 153
+TYN LI Y ++ E++ L + PDV T N LR+ +SG++ + ME
Sbjct: 178 ITYNVLIGGYCKS---GEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234
Query: 154 ----KCY--------------------------EKFQSAGIQPSINTFNILLDSYGKAGH 183
+CY ++ + G +P + T+N+L++ K G
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 294
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M Y ++T+NI++ + G E L M + PS VT
Sbjct: 295 LDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNI 354
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ + VL + M +++ +N L+ + + K LE+M RG
Sbjct: 355 LINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
C PD VTY T++ A +G + A E
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEI 441
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ N LR +G+++ K E+ G P + L+ + ++G K + +ME
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ ++TYN++I + ++G++ K ++ L R+ + P VT +++R+ +G
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM----SVAPDVVTYNTILRSLCDSG 223
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ VL + D + + L++A + +L+ M+++GCKPD VTY
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283
Query: 313 TMVRAYSTNGMKNHAKEF 330
++ G + A +F
Sbjct: 284 VLINGICKEGRLDEAIKF 301
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A E+ + +GC ++ ++ + G + A LLE M+ +PD+ TY
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK-GLKPDIITY 492
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S L++ D+ + DM I+P+ VTYN ++ +A+ + L M+
Sbjct: 493 STLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 552
Query: 127 EDCEPDVWT 135
+ C+P T
Sbjct: 553 KGCKPTKAT 561
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 6/327 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+AH + ++MVD+G + +++ L+ A+ ++ D+A LL M + C P
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-GCTP 463
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V T++ +I K+ + + DM+ + G+ P+ +TY TLID R + E
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M +PD + NC + G + + Y + + P TFNIL+ K
Sbjct: 524 LDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACK 579
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+FE+ SA+ E M + ++T+ +ID +AG ++ + LM + + P+ VT
Sbjct: 580 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV +G+ E+ L + +S + D++ + LV A R + ++ ++
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
G PD VTY +V +G A
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQA 726
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 160/341 (46%), Gaps = 9/341 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +A +++ M++ + +F L++ ++G F++A +L E M + QP
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKNLQP 600
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+ LI KA + + +L M G+ PN VTYN L+ ++ E L
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+S C PD T + A + + D + + +S G P T+NIL+D K+
Sbjct: 661 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 720
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK---PSC 238
G E+ V+E M + +VTYN +ID+ +AGDL++ L M S + P+
Sbjct: 721 GQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV 780
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFI--DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
VT L+ G+ ++ +++ + + D++ + + +N +D + AE ++
Sbjct: 781 VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840
Query: 297 EVMQQRGCK--PDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
++ + PD VT+ T++ G + A F D++
Sbjct: 841 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI 881
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 159/344 (46%), Gaps = 11/344 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A + + MV GC ++ ++ +L+ A R+ D A L+ +K+
Sbjct: 646 GLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF-GWD 704
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE---M 117
PD TY+IL+ K+ ++ +L +M +G P+ VTYNTLID+ +A E +
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF--QSAGIQPSINTFNILL 175
+ +S C P+V T + + G+ID + ++ +S + P+I T+N L
Sbjct: 765 HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824
Query: 176 DSYGKAGHFEKMSAVMEYMQ--KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
D K + +M ++ S VT++ +ID + G + +F M +
Sbjct: 825 DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ VT L+ K E+ +++ + + + D + ++ LVDA+ + E
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+L M RGC P+ VT+ +++ + A + F D+ K
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 151/387 (39%), Gaps = 72/387 (18%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDA--NTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TP 57
G CK + ++A EL Q M + CD N ++ + L + + +A L+ +++ +
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 354
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD T+S LI K D+ ++ DM G PN +TYN L++ +A
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M+ + PDV T + + AF + ++D + S G P++ TFN ++D
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474
Query: 178 Y---------------------------------------GKAGHFEKMSAVMEYMQKYH 198
G+AG E + M Y
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYA 534
Query: 199 YSWTI----------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMR 230
++ I VT+NI+I +AG+ +Q LF M
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
++ ++P +T +L+ AG+ E +L + N + + V +N LV +
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRA 317
E LE M GC PD +TY ++V A
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYA 681
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 152/345 (44%), Gaps = 9/345 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + + A +L + G D +T ++ L+ +SG ++A ++LE M P
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGH-HP 740
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR---PNTVTYNTLIDAYGRAKMFAEME 118
DV TY+ LI S KA ++ + L DMS++ R PN VTY+ LI+ + E
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAR 800
Query: 119 LTLVKMLSEDCE--PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ--SAGIQPSINTFNIL 174
+ +M+ + C+ P++ T N L + + + S + P TF+ L
Sbjct: 801 ELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTL 860
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D K G ++ V + M Y +VTYN++++ + +++ + M + +
Sbjct: 861 IDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGV 920
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P +T LV A+ A ++ +L + + + V FN ++D + E
Sbjct: 921 TPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQ 980
Query: 295 VLEVMQ-QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ + M + G PDK+TY T++ G A+ D + D
Sbjct: 981 MFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPD 1025
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 151/351 (43%), Gaps = 24/351 (6%)
Query: 3 GKCKQP--EKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
G CKQ +A EL +++ D +T +F+ L+ + G D+A S+ + M
Sbjct: 332 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI-AGG 390
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P+V TY+ L+ KA ++ A++ M +G+ P+ +TY+ L+DA+ +A E
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA----GIQPSINTFNIL 174
L M S C P+V T N + S D + ++ F G+ P T+ L
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKS---DRSGEAFQMFDDMALKHGLVPDKITYCTL 507
Query: 175 LDSY---GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+D G+AG E + M Y +N I+ + GD+ + ++ M
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPDPDTY-------AFNCCINGLSKLGDVSRALQVYNRMLE 560
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ P VT L+ AG E+ ++ + ++ D + F L+D +
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 620
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ +L++M G P+ VTY +V +G A +F L E + C+
Sbjct: 621 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF--LEEMVSSGCV 669
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 116/232 (50%), Gaps = 14/232 (6%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + E+AH + ++MVD+G + +++ L+ A+ ++ D+A LL M +
Sbjct: 896 MNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR-G 954
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEM 117
C P+V T++ +I K+ + + DM+ + G+ P+ +TY TLID R +
Sbjct: 955 CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E+ L M +PD + NC + G + + + + P TFNIL+
Sbjct: 1015 EVLLDAMP----DPDTYAFNCCINGLSKLGDV---SRALHRMLELELVPDKVTFNILIAG 1067
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
KAG+FE+ SA+ E M + ++T+ +ID +AG Q+E + +M
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG---QVEATWDIM 1116
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 152/375 (40%), Gaps = 39/375 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSA------------------------ 36
+L K P KA +LF++ + C N +++ LL A
Sbjct: 120 LLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS 179
Query: 37 ----------YGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
R+G +A + P + TY+ +I K+ L
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
++ +G P+ VTYNTLID+ +A E M S C P+V T + +
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 147 GQIDTMEKCYEKF--QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWT 202
G+ID + ++ +S + P+I T+N LD K + +M ++ S
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VT++ +ID + G + + +F M + P+ +T +LV A K E+ +++
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + D + ++ LVDA+ + E +L M RGC P+ VT+ +++ +
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 479
Query: 323 MKNHA-KEFQDLVEK 336
A + F D+ K
Sbjct: 480 RSGEAFQMFDDMALK 494
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 135/329 (41%), Gaps = 19/329 (5%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDA--NTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TP 57
G CK + ++A EL Q M+ + CD N ++ + L + + +A L+ +++ +
Sbjct: 789 GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSL 848
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD T+S LI K D+ + DM G PN VTYN L++ +
Sbjct: 849 RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERA 908
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M+ + PDV T + + AF + +D + S G P++ TFN ++D
Sbjct: 909 HAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDG 968
Query: 178 YGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K+ + + + M K+ + +TY +ID R G Q E L M P
Sbjct: 969 LCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----P 1024
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ KLG V R + +++ D V FN L+ + F +
Sbjct: 1025 DTYAFNCCINGL------SKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQAS 1078
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ E M + +PD +T+ ++ G
Sbjct: 1079 ALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC Q ++A +F M+ G N ++ L++ ++ ++A +++E M + P
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK-GVTP 922
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS+L+ + KA D+ LL M+++G PN VT+N++ID ++ E
Sbjct: 923 DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982
Query: 122 VKM-LSEDCEPDVWTMNCTLR----AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M L PD T CTL G +GQ E A P FN ++
Sbjct: 983 DDMTLKHGLAPDKITY-CTLIDGLFRTGWAGQ-------AEVLLDAMPDPDTYAFNCCIN 1034
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K G +S + M + VT+NI+I +AG+ +Q LF M ++ ++P
Sbjct: 1035 GLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 1091
Query: 237 SCVTLCSLVRAYGHAGKPE 255
+T +L+ AG+ E
Sbjct: 1092 DVMTFGALIDGLCKAGQVE 1110
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 39/316 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G KQ E ELF+++ + ++ +++ Y R G+ ++AF + + M+ PD
Sbjct: 409 GDVKQAE---ELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPD 465
Query: 63 VNTYSILIK-----------------------------------SCLKAFAFDKVQALLS 87
TY +++ +C + ++V +
Sbjct: 466 SYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQ 525
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M G PNT+T+N +ID YG++ M + K+ + D T + + ++G
Sbjct: 526 EMIDVGCIPNTITFNVMIDLYGKSGML-DRARDASKLAQQLGVADKITFSTLINSYGKKQ 584
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
ME + Q+AG S+ +N +LD+YGKAGH +K+ V+ M+K + +YN
Sbjct: 585 DFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYN 644
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+I+ +GR + +ME LF M+ E P T +++R YG+A P+K + + +S
Sbjct: 645 ILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKAVDTFKMMQDS 704
Query: 268 DIMLDTVFFNCLVDAY 283
IM D V + LV A+
Sbjct: 705 GIMPDRVTYVMLVAAF 720
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 154/341 (45%), Gaps = 5/341 (1%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M+G C + K A + FQAM G + +F L+S YG++ +L MKN
Sbjct: 226 MIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNF- 284
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C PD T ++++ +A KV +LS + G +T +Y TL+ Y + + E
Sbjct: 285 GCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEA 344
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
M P + + A ++G + + QSAG+ PS+ T +++
Sbjct: 345 LSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINV 404
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKP 236
+G G ++ + ++ I+ YN++I+ + R G ++ +++LM E + P
Sbjct: 405 HGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLP 464
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
T S++R + + + NSD+ LD V NC+++ R E+ +
Sbjct: 465 DSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIF 524
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ M GC P+ +T+ M+ Y +GM + A++ L +++
Sbjct: 525 QEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQL 565
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ H++FQ M+D GC NT +F ++ YG+SG+ D+A + + D T+S
Sbjct: 518 EEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLG--VADKITFST 575
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K F ++A L +M G + YN ++DAYG+A ++E + +M
Sbjct: 576 LINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSG 635
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ D+ + N + +G +I ME + K Q G P T+N ++ +YG A + +K
Sbjct: 636 LQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKAV 695
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ MQ VTY +++ AF +AG+L
Sbjct: 696 DTFKMMQDSGIMPDRVTYVMLVAAFEKAGNL 726
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PD T++ LI S KA D M +G++P +TY+ ++ Y + + E
Sbjct: 42 CVPDDYTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAE 101
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ ML + V + + + G + EK E + I P + + +++Y
Sbjct: 102 VAFSHMLQSGIQV-VAAYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTY 160
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G+ G E+ +M+ M++ +V YN +I A+G+AG ++ LF M+ ++P
Sbjct: 161 GQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDE 220
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT ++ A G AGK + + IM + FN L+ YG+ + + VL
Sbjct: 221 VTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLAD 280
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M+ GC PD T +VRAY G
Sbjct: 281 MKNFGCTPDSQTLDAVVRAYERAG 304
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 2/318 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG +Q EL M+ +GC + +F L+ + ++ D A + M Q
Sbjct: 20 ILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQMMLE-KGVQ 78
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P TYS+++ K + + S M GI+ Y+ +I Y R F + E
Sbjct: 79 PTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAMIAIYTRCGFFEKAEKI 137
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M + PD + +G G+I+ E + + G+ + +N ++ +YGK
Sbjct: 138 MEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGK 197
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG +EK + E M++ VTY+ +I A GRAG L+ F+ M+ I P+
Sbjct: 198 AGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSN 257
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ YG A + VL + N D+ + +V AY R ++ VL +++
Sbjct: 258 FNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLR 317
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ G D +Y T++ Y
Sbjct: 318 EAGWVEDTESYGTLLHVY 335
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 3/331 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + A FQ M+++G +++ ++ Y ++G + A HM + V
Sbjct: 58 KADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSG--IQVV 115
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS +I + F+K + ++ DM I P+ + ++ YG+ E E +
Sbjct: 116 AAYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDT 175
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M V N + A+G +G + + +EK + AG++P T++ ++ + G+AG
Sbjct: 176 MERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGK 235
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ M++ +N +I +G+A ++ + + M++ P TL +
Sbjct: 236 LRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDA 295
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+VRAY AG+ +K+ VL + + + DT + L+ Y + E V M++ G
Sbjct: 296 VVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAG 355
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
P + R+++ A GM A F+D+
Sbjct: 356 MAPKEYMCRSLICACKDAGMFEDATNVFRDM 386
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
R N +YN + G + + ++ L +ML + C PD +T N + + + D +
Sbjct: 8 RGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATR 67
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
++ G+QP+ T+++++ Y K G E +M + + Y+ +I +
Sbjct: 68 AFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQ-VVAAYSAMIAIYT 126
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
R G ++ E + M + +I P + YG GK E+ ++ ++ + L V
Sbjct: 127 RCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVV 186
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+N ++ AYG+ + + + E M++ G +PD+VTY M+ A
Sbjct: 187 GYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGA 229
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C + E +F MV EG N S+ ALL AY G+ A + + +K +PDV
Sbjct: 345 CGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQN-GLRPDVV 403
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + ++ +K + +M RPN V+YN LIDAYG A MF E L +M
Sbjct: 404 SYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEM 463
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV +++ L A G QI ++ E +S GI+ +I +N + SY G +
Sbjct: 464 EKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDY 523
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
K + M + + VTYNI+I + G + F M RI + SL
Sbjct: 524 GKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSL 583
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +Y GK + S + S + D + + +++AY + + + M+
Sbjct: 584 ICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTV 643
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+PD + +++ A N H + Q L+E M E C+ + + +
Sbjct: 644 QPDAIICSSLMEA--LNRGSQHERVLQ-LMELMKEKCIPLNQKAY 685
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 172/372 (46%), Gaps = 47/372 (12%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
Q KA F+ M +T + ++ + G + +A LL M+ C PDV T
Sbjct: 275 QYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVT 334
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ S + +A+ M +G++PN V+YN L+ AY M A+ L + K+L
Sbjct: 335 YTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHAD-ALGIFKLL 393
Query: 126 SED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ PDV + L A+G SGQ + + +++ + +P+I ++N L+D+YG AG F
Sbjct: 394 KQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMF 453
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ +++ M+K +V+ + ++ A GR + +++ + +S IK + V S
Sbjct: 454 KEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSG 513
Query: 245 VRAY---GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV--------------------- 280
+ +Y G GK +L +V+ S++ D V +N L+
Sbjct: 514 IGSYLNFGDYGKALELYAVMM---ASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVD 570
Query: 281 -------DAYGRLKC-------FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ Y L C E + M++ GC PD +TY M+ AY+ +G +
Sbjct: 571 LRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRN 630
Query: 327 AKEFQDLVEKMD 338
A DL ++M+
Sbjct: 631 A---WDLFKEME 639
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 165/361 (45%), Gaps = 38/361 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q ++A LF M + C + + +L+ A+ R+G + A ++++ M P TY
Sbjct: 170 QIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAA-IPPSRTTY 228
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMFAEM--- 117
+ +I +C A + K L M+ G+ P+ VT+N ++ A Y +A + EM
Sbjct: 229 NNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKG 288
Query: 118 -------------------------ELTLVKMLSE---DCEPDVWTMNCTLRAFGNSGQI 149
+ L+ + E C PDV T + ++ G++
Sbjct: 289 ANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKV 348
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + ++ + G++P+I ++N LL +Y G + + +++ +V+Y +
Sbjct: 349 EDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTL 408
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++A+GR+G ++ F+ MR +P+ V+ +L+ AYG AG ++ S+L ++ I
Sbjct: 409 LNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGI 468
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V + L+ A GR + ++ +LE + RG K + V Y + + +Y G A E
Sbjct: 469 PPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALE 528
Query: 330 F 330
Sbjct: 529 L 529
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 152/331 (45%), Gaps = 4/331 (1%)
Query: 9 EKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A +F+ M + E A + ++ + R D+A L M+ C+PD + Y+
Sbjct: 136 QHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEW-RCKPDADIYN 194
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI + +A + ++ DM I P+ TYN +I+A G A + + KM
Sbjct: 195 SLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRN 254
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD+ T N L AF N Q +E + A I P T NI++ K G + +
Sbjct: 255 GVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEA 314
Query: 188 SAVMEYMQKYHYSWT--IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ M++ +VTY ++ ++ G ++ + +F +M +E +KP+ V+ +L+
Sbjct: 315 IELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALL 374
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
AY G + + + + + D V + L++AYGR + + + M++ C+
Sbjct: 375 GAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCR 434
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ V+Y ++ AY + GM A +EK
Sbjct: 435 PNIVSYNALIDAYGSAGMFKEAISLLHEMEK 465
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ +G A + MKN + + Y ++I+ + D+ + L
Sbjct: 120 RNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFF 179
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ YN+LI A+ RA + + ML P T N + A G +G
Sbjct: 180 EMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAG 239
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ +K G+ P + T NI+L ++ + K A E M+ + + T N
Sbjct: 240 NWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLN 299
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + G + L MR +R + P VT S++ +Y GK E +V +
Sbjct: 300 IVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMV 359
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + V +N L+ AY A+ G+ ++++Q G +PD V+Y T++ AY +G
Sbjct: 360 AEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPE 419
Query: 326 HAKE 329
A+E
Sbjct: 420 KARE 423
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E F+ M C N S+ AL+ AYG +G+F +A SLL M+ PD
Sbjct: 413 GRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD-GIPPD 471
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTL 121
V + S L+ +C + K+ +L ++GI+ N V YN+ I +Y + + +EL
Sbjct: 472 VVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYA 531
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V M++ + PD T N + G+ K +E I + ++ L+ SY K
Sbjct: 532 V-MMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQ 590
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M++ ++TY +I+A+ G + LF+ M ++P +
Sbjct: 591 GKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIIC 650
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
SL+ A + E++ ++ + I L+
Sbjct: 651 SSLMEALNRGSQHERVLQLMELMKEKCIPLN 681
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 152/327 (46%), Gaps = 4/327 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ + G + S+T LL+AYGRSG +KA + M+ C+P++ +Y+ LI +
Sbjct: 389 IFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKN-SCRPNIVSYNALIDAY 447
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A F + +LL +M GI P+ V+ +TL+ A GR + +++ L S + ++
Sbjct: 448 GSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNI 507
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
N + ++ N G + Y ++ + P T+NIL+ K G + + E
Sbjct: 508 VCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFED 567
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M T Y+ +I ++ + G L + E F M+ P +T +++ AY G
Sbjct: 568 MVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGS 627
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ + ++ + + D + + L++A R + ++E+M+++ ++ Y
Sbjct: 628 WRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFE 687
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMDET 340
++ + S M K +++E +D +
Sbjct: 688 IIASCS---MLRDWKTASEIIEHLDSS 711
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 9/317 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C+Q K + +A G N + + + +Y G + KA L M + + PD
Sbjct: 483 GRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMAS-NVNPD 541
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K + + DM I Y++LI +Y + E E T
Sbjct: 542 AVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFS 601
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PDV T + A+ + G +++ + +QP + L+++ +
Sbjct: 602 SMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGS 661
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E++ +ME M++ Y +I + D K + + S S TL
Sbjct: 662 QHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLN 721
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNS----DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ G GK E + + + +S + TV L+ A G+ + + E VL+
Sbjct: 722 HLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLL-AVGKWRKYIE---VLQW 777
Query: 299 MQQRGCKPDKVTYRTMV 315
M+ G P Y+ ++
Sbjct: 778 MEDAGVSPTLYMYQNVL 794
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 40/251 (15%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A L F+ MVD + +++L+ +Y + G +A S MK + C
Sbjct: 551 GLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKES-GCL 609
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ +I++ ++ L +M ++P+ + ++L++A R E L
Sbjct: 610 PDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQH-ERVLQ 668
Query: 121 LVKMLSEDCEP------------------------------------DVWTMNCTLRAFG 144
L++++ E C P V T+N L G
Sbjct: 669 LMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLG 728
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G+ + M K + K S+ ++T+ +LL + G + K V+++M+ S T+
Sbjct: 729 KCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLY 788
Query: 205 TYNIVIDAFGR 215
Y V+ R
Sbjct: 789 MYQNVLPYIWR 799
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 70/173 (40%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ + +++ + + ++ + MQ++ YN +I A RAG + +
Sbjct: 156 DIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDD 215
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M I PS T +++ A G AG +K + + + + + D V N ++ A+
Sbjct: 216 MLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQ 275
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+++ E+M+ PD T ++ +G A E + + + C
Sbjct: 276 YSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQC 328
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M + C +++++ AL++A+GR+G + A +++E M P +TY+
Sbjct: 160 DQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREA-IPPSRSTYNN 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +C + + + + M+ G+ P+ VT+N ++ AY +++ M +
Sbjct: 219 LINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTN 278
Query: 129 CEPDVWTMNCTLRAFGNSGQ----IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T N + GQ ID EK A +P I TF ++ Y +G
Sbjct: 279 IRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREK--RAECRPDIVTFTSIIHLYSLSGQV 336
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E AV M + TIV+YN +I A+ G ++ +F+ +++ + P V+ SL
Sbjct: 337 ENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSL 396
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +YG + +P+K + + + + + V FN L+DAYG A+ VL M+Q G
Sbjct: 397 LSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGI 456
Query: 305 KPDKVTYRTMVRAYSTNGMK 324
P+ VT T++ A G K
Sbjct: 457 HPNIVTICTLLAACGRCGQK 476
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +A ++ + M + G + + +LSAY + KA S E MK T + +PD
Sbjct: 224 GSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGT-NIRPD 282
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K +K + + M + RP+ VT+ ++I Y + +
Sbjct: 283 TTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAV 342
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E P + + N + A+ G + ++K +++G+ P + ++ LL SYG+
Sbjct: 343 FSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGR 402
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ +K + M+K +V++N +IDA+G G L + R M + I P+ VT
Sbjct: 403 SKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVT 462
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ + +VL I L+TV N + +Y + + + + M+
Sbjct: 463 ICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMR 522
Query: 301 QRGCKPDKVTYRTMV 315
+ P+ VTY ++
Sbjct: 523 KMKVAPNSVTYTVLI 537
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 153/348 (43%), Gaps = 36/348 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F M+ EG S+ AL+ AY G+ ++A S+ + +K + PDV +Y
Sbjct: 335 QVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKAS-GLLPDVVSY 393
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ S ++ K + + + M ++PN V++N LIDAYG + A+ L +M
Sbjct: 394 TSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQ 453
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P++ T+ L A G GQ ++ + GI+ + N + SY G +EK
Sbjct: 454 DGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEK 513
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVID----------------------------------- 211
A+ M+K + VTY ++I
Sbjct: 514 AVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVIC 573
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A+ + G + + E +F +M+ P +T +++ AY K +++ +++ DI L
Sbjct: 574 AYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQL 633
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
DT+ + L+ A+ + +++ + E M+++ + MV A S
Sbjct: 634 DTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACS 681
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + + MK + + Y+++I+ + D+ + L
Sbjct: 108 KNFPRLIKEITQRGALEHSNLVFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFF 167
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P++ TYN LI+A+GRA + + ML E P T N + A G+SG
Sbjct: 168 EMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSG 227
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
K ++ G+ P + T NI+L +Y + K + E M+ + T N
Sbjct: 228 NWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRN 287
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERI--KPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + G ++ +F MR +R +P VT S++ Y +G+ E +V +
Sbjct: 288 IVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTML 347
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ V +N L+ AY E V + ++ G PD V+Y +++ +Y +
Sbjct: 348 AEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPK 407
Query: 326 HAKEFQDLVEK 336
A+E ++++K
Sbjct: 408 KAREMFNMMKK 418
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 160/369 (43%), Gaps = 39/369 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
Q KA F+ M +T + ++ + G +KA + M+ +C+PD+ T
Sbjct: 263 QYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVT 322
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ +I + + +A+ S M +G+ P V+YN LI AY M E K+
Sbjct: 323 FTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIK 382
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PDV + L ++G S Q + + + A ++P++ +FN L+D+YG G
Sbjct: 383 ASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLA 442
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
V+ M++ IVT ++ A GR G ++ + + IK + V S +
Sbjct: 443 DAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAI 502
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA------YGR-LKCFAEM------ 292
+Y + G+ EK ++ + + ++V + L+ YG+ ++ FA+M
Sbjct: 503 GSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIA 562
Query: 293 ----------------------KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + +M+ GC PD +T+ M+ AY+ H +
Sbjct: 563 LTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAG---EHWGKA 619
Query: 331 QDLVEKMDE 339
DL+++M++
Sbjct: 620 CDLIQEMED 628
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 161/385 (41%), Gaps = 63/385 (16%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PD- 58
G+ KQP+KA E+F M N SF AL+ AYG +GL A +L M+ P+
Sbjct: 401 GRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNI 460
Query: 59 ------------CQPDVNTYSIL------------------IKSCLKAFAFDKVQALLSD 88
C VN ++L I S + ++K AL +
Sbjct: 461 VTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNS 520
Query: 89 MSTQGIRPNTVTYNTLIDA------YGRA-KMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
M + PN+VTY LI YG+A + FA+M + + E C + +
Sbjct: 521 MRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVC-------SSVIC 573
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A+ GQI E + + AG P I TF +L +Y H+ K +++ M+ Y
Sbjct: 574 AYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQL 633
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS------CVTLCSLVRAYGHAGKPE 255
+ + ++ AF + G+ Q+ L M+ + I S V+ CSL+R +
Sbjct: 634 DTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDW------R 687
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ ++++ ++ S ++ N L+ GR M + + G + + TY M+
Sbjct: 688 TILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIML 747
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDET 340
+ G + +++ +++E M++
Sbjct: 748 KNLLAVG---NWRKYIEVLEWMEDA 769
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 88/226 (38%), Gaps = 46/226 (20%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A +F M GC + +FTA+L AY + KA L++ M++ D Q D
Sbjct: 580 QITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDY-DIQLDTIAC 638
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S L+++ K +V L M + I + + ++ A + + + L L+K++
Sbjct: 639 SALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTI-LNLMKLM- 696
Query: 127 EDCEPD-----VWTMNCTLRAFGNSGQIDTMEKCY------------------------- 156
EP + +N L G SG+I++M K +
Sbjct: 697 ---EPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNLLAV 753
Query: 157 ----------EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
E + AGIQPSI + + K G E + + E
Sbjct: 754 GNWRKYIEVLEWMEDAGIQPSIGMYYDISSYVQKGGGAEYAAIIQE 799
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
E+A ELF + EG + +L YGR G + + ++LE M+ +PD T S
Sbjct: 204 ERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMR-AAGVEPDGFTAS 262
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +C + D+ A D+ ++G P VTYN L+ +G+A + E L +M
Sbjct: 263 TVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEES 322
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C+PD T N ++ +G + KC + S GI P+ T+N ++ +YG AG ++
Sbjct: 323 GCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEA 382
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A+ ++M+K + + TYN+++ G+ M + M P+ VT +++
Sbjct: 383 LALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAV 442
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G G + VL + + + L FN L+ AYGR A + + M G P
Sbjct: 443 CGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC 502
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY ++ S G A Q ++ KM
Sbjct: 503 LTTYNALLSVLSRQGDWTAA---QSIINKM 529
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 38 GRSGLFDKAFSLLEHMKNTPDCQP--DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
R G D LL+ M P P DV Y+ ++ + +++ L +++ +G+
Sbjct: 160 AREGQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVA 219
Query: 96 PNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
P V YN ++D YGR + + ++ L +M + EPD +T + + A G G +D
Sbjct: 220 PTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVA 279
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+E +S G P + T+N LL +GKAG++ + V++ M++ VTYN + ++
Sbjct: 280 FFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYA 339
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
RAG ++ M S+ I P+ T +++ AYG+AGK ++ ++ ++ + +
Sbjct: 340 RAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVN 399
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+N ++ G+ F M +L M + GC P++VT+ TM+ GM+ + ++
Sbjct: 400 TYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTR---VL 456
Query: 335 EKMDETCLAMKRPDF 349
E+M + + R F
Sbjct: 457 ERMKSCGVELCRDTF 471
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 151/336 (44%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M + GC + ++ L +Y R+G +++A L+ M +
Sbjct: 302 VFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMV-SKGIL 360
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ ++ + A D+ AL M G P TYN ++ G+ F M
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G G + + E+ +S G++ +TFN L+ +YG+
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGR 480
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M ++ + TYN ++ R GD + + M++E KP+ ++
Sbjct: 481 CGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L++ + G + ++ + + + V LV + + + ++ + +
Sbjct: 541 YSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVM 600
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
RG KPD V + +M+ Y+ NGM A E D +++
Sbjct: 601 ARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQ 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + +F L+SAYGR G AF + + M P + TY+ L+ + +
Sbjct: 463 GVELCRDTFNTLISAYGRCGSRANAFKMYDEM-TAAGFTPCLTTYNALLSVLSRQGDWTA 521
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
Q++++ M +G +PN ++Y+ L+ + + A +E + E E V+ LR
Sbjct: 522 AQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIE----AIEKEVYEGTVFPSWVILR 577
Query: 142 AFGNSG----QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
S +++ +E+ +++ + G +P + FN +L Y K G + K + + +++
Sbjct: 578 TLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQG 637
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
S ++TYN ++D + ++ + + E + + +++ ++KP V+ +++ + G ++
Sbjct: 638 GLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEA 697
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+L + + V ++ LV Y + F+E + V+ M QR P ++TYR +V +
Sbjct: 698 QRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDS 757
Query: 318 YSTNGMKNHAKEF 330
Y + A+ F
Sbjct: 758 YCKAKRFDEARGF 770
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 160/391 (40%), Gaps = 71/391 (18%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + MV +G N ++ +++AYG +G D+A +L + MK P VNTY++
Sbjct: 345 EEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKN-GFIPYVNTYNL 403
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K F+ + +L +MS G PN VT+NT++ G+ M + L +M S
Sbjct: 404 ILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCG 463
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF----------------- 171
E T N + A+G G K Y++ +AG P + T+
Sbjct: 464 VELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQ 523
Query: 172 ------------------NILLDSYGKAGHFEKMSAVME--YMQKYHYSWTI-------- 203
++LL + K G+ + A+ + Y SW I
Sbjct: 524 SIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISN 583
Query: 204 -------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
V +N ++ + + G ++ +F ++ + P
Sbjct: 584 FKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDL 643
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T S++ Y + + + +L+ + S + D V +N +++ + + E + +L
Sbjct: 644 ITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSE 703
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M G +P VTY T+V Y++ M + A+E
Sbjct: 704 MIADGVRPCVVTYHTLVGGYASREMFSEARE 734
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C A +++ M G ++ ALLS R G + A S++ MKN +P+
Sbjct: 479 GRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNE-GFKPN 537
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+YS+L++ K ++A+ ++ + P+ V TL+ + + + +E
Sbjct: 538 DMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQ 597
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++++ +PD+ N L + +G + ++ + G+ P + T+N ++D Y K+
Sbjct: 598 EVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSN 657
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ ++ +V+YN V++ F + G +K+ + + M ++ ++P VT
Sbjct: 658 ESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYH 717
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+LV Y + V+ ++ ++ + + +VD+Y + K F E +G L
Sbjct: 718 TLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFL 771
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 159/359 (44%), Gaps = 37/359 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
++G+ EK E+F+ M + N +FTAL++AYGR+G ++ + LL MK +
Sbjct: 91 IMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKE-QVE 149
Query: 61 PDVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNT---------------- 103
P++ TY+ ++ +C K ++ + L + M +GI+P+ +TYNT
Sbjct: 150 PNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAM 209
Query: 104 -------------------LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+D + + +E L +M E PD+ N + A+
Sbjct: 210 VFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYA 269
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
++G + +++ Q G P + T++ LL YG G FE++ ++ M+ T+
Sbjct: 270 DAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVA 329
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +I FG G ++ LF M +KP T +L+ G G + + + +
Sbjct: 330 TYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHM 389
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ L+ +YG++ + + +++ G P Y +++ Y+ G+
Sbjct: 390 LTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGL 448
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 2/310 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
Q F+ + + + +A L ++M+ C+P + Y+I+I + +K +
Sbjct: 47 QDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFE 106
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
DM ++ N + LI+AYGR + L +M E EP++ T N L A G
Sbjct: 107 DMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGG 166
Query: 148 -QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ + + + + GIQP + T+N LL + G E+ + V + M + VTY
Sbjct: 167 LDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTY 226
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++D F + L ++E L R M E P SL+ AY AG V + +
Sbjct: 227 KSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQR 286
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
D ++ L+ YG CF +++ + M+ P TY ++++ + G +
Sbjct: 287 GGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQE 346
Query: 326 HAKEFQDLVE 335
F D+V+
Sbjct: 347 SINLFHDMVD 356
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 37/352 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF M EG + ++ LLSA GL ++A + + M N D TY L+ +
Sbjct: 175 LFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTM-NESGVVADAVTYKSLVDTF 233
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ +V+ LL +M +G P+ YN+LI+AY A +M C PDV
Sbjct: 234 AGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDV 293
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + LR +GN G + + + + P++ T+N L+ +G+ G+F++ +
Sbjct: 294 ETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHD 353
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG---- 249
M TY+ ++ GR G ++ + + M + PS L+ +YG
Sbjct: 354 MVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAM 413
Query: 250 ------------HAG-KPE------------------KLGSVLRFIDNSDIMLDTVFFNC 278
AG P+ + GS L ++ + N
Sbjct: 414 YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNS 473
Query: 279 LVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+++AY ++ E ++ E+ Q+ G + D+ T+ T++ Y G+ AKE
Sbjct: 474 VMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKE 525
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 158/334 (47%), Gaps = 3/334 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A L M + GC T S+ L+ YG G ++A LL+ M + +P+
Sbjct: 74 GKMKE---AEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPN 130
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T+++LIK+ +K + ++S M G+ P+ V+YNTL + + + E +
Sbjct: 131 DRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVIT 190
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + P+ T + + +GQID + E+ + GI P+I FN L+ Y ++
Sbjct: 191 EMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESM 250
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K+ V + M+ + + T+ ++++A+ G + + + + M+ ++P +
Sbjct: 251 KPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYS 310
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
LV+ Y G+PE+ + L + + ++ + + + ++ Y L + V + M+ R
Sbjct: 311 ILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSR 370
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ T+RT++ + A+E + + K
Sbjct: 371 SVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRK 404
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 127/311 (40%), Gaps = 36/311 (11%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P TY++L+ S + + LL M + P+ + +NTL++ Y A E E
Sbjct: 22 RPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEA 81
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK--------------------- 158
+++M C + N ++ +G GQ + K ++
Sbjct: 82 LVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAW 141
Query: 159 ---------------FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
++AG+ P + ++N L + K G V+ MQ +
Sbjct: 142 AHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNE 201
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
TY IVI+ + AG + + L M+ + I P+ LV+ Y + KP K+ V +
Sbjct: 202 RTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKL 261
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++N + D F +++A+ E K VL M++ +PD + Y +V+ YS G
Sbjct: 262 MENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGR 321
Query: 324 KNHAKEFQDLV 334
+ F +++
Sbjct: 322 PEEGEAFLNIM 332
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 1/291 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K PEKA + M G + S+ L + + G A +++ M+N +P+ T
Sbjct: 145 KNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNV-YLRPNERT 203
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y I+I + A D+ L+ M GI P +N L+ Y + +++ M
Sbjct: 204 YGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLME 263
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +PDV T + A+ ++G ID + + + +QP + ++IL+ Y + G E
Sbjct: 264 NFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPE 323
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ A + M + ++TY VI + + +F+ MRS + P+ T +L+
Sbjct: 324 EGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLI 383
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ A P + +L +I + D + D + + E VL
Sbjct: 384 WGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADCWRSIGADGEADRVL 434
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+V++ L ++ G RP TY L+ + E L L +M ++ PD N L
Sbjct: 8 QVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLL 67
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK-YHY 199
+ +G++ E + + G +++N L+ YG G E+ +++ M K +
Sbjct: 68 NGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNS 127
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T+N++I A+ + ++ + +MR+ + P V+ +L + + GKP +
Sbjct: 128 KPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAEN 187
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
V+ + N + + + +++ Y E ++E M+ G P + +V+ YS
Sbjct: 188 VITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYS 247
Query: 320 TNGMKNH 326
+ MK H
Sbjct: 248 ES-MKPH 253
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
GD +Q+ + +R + +P+ T L+ + G+ + +L+ ++ +++ D +FF
Sbjct: 4 GDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFF 63
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
N L++ Y E + ++ M++RGC +Y T+++ Y +G A K Q++ +
Sbjct: 64 NTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAK 123
Query: 336 KMD 338
++
Sbjct: 124 DVN 126
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G C +A + + M D G + + +LSAY + KA S E MK T + +PD
Sbjct: 16 GSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGT-NIRPD 74
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ--GIRPNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K + + + S M + RP+ VT+ ++I Y + +
Sbjct: 75 TTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAV 134
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E +P++ + N + A+ + G +++ + +G P + ++ L+ ++G+
Sbjct: 135 FSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGR 194
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + V + M++ +V+YN ++DA+G G L Q + R M + I P+ V+
Sbjct: 195 SQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVS 254
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ + SVL + I L+T+ N + +Y + + + + M+
Sbjct: 255 ICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSME 314
Query: 301 QRGCKPDKVTYRTMV 315
+ KPD VT+ ++
Sbjct: 315 NKTTKPDSVTFTILI 329
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 4/343 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F M+ EG N S+ AL+SAY G+ +AFS+ + MK + C PDV +Y
Sbjct: 127 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFC-PDVVSY 185
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + ++ + + + M +PN V+YN L+DAYG + L +M
Sbjct: 186 TSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQ 245
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+V ++ L A G GQ ++ + GI + N + SY G +EK
Sbjct: 246 DGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEK 305
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M+ VT+ I+I R ++ F+ M RI S S++
Sbjct: 306 AINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 365
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AY G+ K S+ + S D V + +++AY + + ++ + + M+ +
Sbjct: 366 AYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQL 425
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
D + +++A++ N A L E M E + +F
Sbjct: 426 DSIACSALMKAFNKG---NQASNVLILAEIMKEKGIPFNDANF 465
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I P+ T+N LI+A G + E KM PD+ T N L A+ + Q
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT--IVTYNIVID 211
+E + I+P T NI++ K + + + M++ +VT+ +I
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ G ++ + +F M +E IKP+ V+ +L+ AY G ++ SV + S
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
D V + L+ +GR + A + V ++M++ CKP+ V+Y ++ AY +NG + +
Sbjct: 181 DVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNG---YLPQAV 237
Query: 332 DLVEKMDE 339
D++ +M++
Sbjct: 238 DILREMEQ 245
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 6/268 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +T++ LI +C + + + M+ G+ P+ VT+N ++ AY +++
Sbjct: 3 PSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSY 62
Query: 121 LVKMLSEDCEPDVWTMN----CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M + PD T+N C ++ I+ EK + +P + TF ++
Sbjct: 63 FELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREK--RSECRPDVVTFTSIIH 120
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y G E AV M IV+YN +I A+ G K+ +F M+ P
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
V+ SL+ +G + +P + V + + + V +N L+DAYG + +L
Sbjct: 181 DVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDIL 240
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
M+Q G P+ V+ T++ A G K
Sbjct: 241 REMEQDGIHPNVVSICTLLAACGRFGQK 268
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A F+ M+D +++ +++++ AY + G KA SL +K + C PD+ TY+
Sbjct: 339 EEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGS-GCCPDLVTYTA 397
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + ++KV AL +M I+ +++ + L+ A+ + + + L L +++ E
Sbjct: 398 MINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNV-LILAEIMKEK 456
Query: 129 CEP------------------------------------DVWTMNCTLRAFGNSGQIDTM 152
P + T+N L+ G SG+ + M
Sbjct: 457 GIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIM 516
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + +F + G +INT++ILL + AG + K V+++M + YN ++
Sbjct: 517 IKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFF 576
Query: 213 FGRAGD 218
GD
Sbjct: 577 AQHCGD 582
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 9/317 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q + A G NT + + + +Y G ++KA +L M+N +PD
Sbjct: 263 GRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTT-KPD 321
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ILI C + +++ +M I ++ Y+++I AY + + E
Sbjct: 322 SVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFN 381
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ C PD+ T + A+ S + + Y++ ++ IQ + L+ ++ K
Sbjct: 382 SLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGN 441
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + E M++ + + ++ A D ++ L LM S T+
Sbjct: 442 QASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTIN 501
Query: 243 SLVRAYGHAGKPEKLGSVL-RFID-NSDIMLDT--VFFNCLVDAYGRLKCFAEMKGVLEV 298
L++ G +GK E + + RF+ S + ++T + L+ A G+ + + E VL+
Sbjct: 502 HLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSA-GKWRKYIE---VLQW 557
Query: 299 MQQRGCKPDKVTYRTMV 315
M G +P Y ++
Sbjct: 558 MNDAGIQPSHAMYNNIL 574
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 165/340 (48%), Gaps = 10/340 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++ + M ++ + +T L+S +G+SG + L + MK P
Sbjct: 332 LCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK-KIVP 390
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ +I +A + + L S+M ++G++P+ VTY LID Y +A E
Sbjct: 391 DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLH 450
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + P+V T + G++D + + G+QP++ T+N L++ K
Sbjct: 451 NQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKV 510
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ E+ +ME M + +TY ++DA+ + G++ + L R+M + ++P+ VT
Sbjct: 511 GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEV-- 298
L+ + +G E +++++ + IM + FN L+ Y C M+ +E+
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY----CIRNNMRATIEIYK 626
Query: 299 -MQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
M +G PD TY +++ + MK +++VEK
Sbjct: 627 GMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 9/285 (3%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E +A L MV++G N ++TAL+ + G D A LL M + Q
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM-SEKGLQ 494
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI K ++ L+ +M G P+T+TY T++DAY + A+
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ML + +P + T N + F SG ++ E+ + GI P+ TFN L+ Y
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ M A +E + H + TYNI+I +A ++K+ +L + M + +
Sbjct: 615 RNN---MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLT 671
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+ SL++ + K E+ + + + + ++ VD
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 4/336 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M+ +G + ++TAL+ Y ++G +AFSL M P+V TY+ L
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK-GLTPNVVTYTAL 468
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ K D LL +MS +G++PN TYN LI+ + + + +M
Sbjct: 469 VDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD T + A+ G++ + G+QP+I TFN+L++ + +G E
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++++M T+N ++ + +++ +++ M ++ + P T L++ +
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
A ++ + + + L +N L+ + + K F E + + E M+ G +K
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKE 708
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
Y V G + E L ++ E CL K
Sbjct: 709 IYDIFVDVNYEEGNWENTLE---LCDEAIEKCLVKK 741
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + + A+EL M ++G N ++ AL++ + G ++A L+E M + P
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM-DLAGFFP 530
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ ++ + K K LL M +G++P VT+N L++ + + M + E +
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + P+ T N ++ + + + Y+ + G+ P NT+NIL+ + KA
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+ ++ + + M + +S T +YN +I F + ++ LF MR+
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 148/342 (43%), Gaps = 12/342 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFD---KAFSLLEHMKNTPDCQPDVNTY 66
+A +LF +++ G + S L+ S FD AF + C V +Y
Sbjct: 199 EAGKLFDKLLNYGVLVSVDSCNLFLARLSNS--FDGIRTAFRVFREYSEVGVCWNTV-SY 255
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++ + + +LL M +G P+ V+Y+ ++D Y + + ++ + ++
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +P+ +T N + +G++ E+ ++ I P + L+ +GK+G+
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M++ VTY +I +AG + + LF M S+ +KP VT +L+
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AG+ ++ S+ + + + V + LVD + +L M ++G +P
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ TY ++ G + V+ M+E LA PD
Sbjct: 496 NVCTYNALINGLCKVG------NIEQAVKLMEEMDLAGFFPD 531
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 158/320 (49%), Gaps = 3/320 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILI 70
H LF M + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLI 58
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + K ++ S + G P+ V YN +I+ +G+AK+F E + +M +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVM 118
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ + + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 119 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+K +V+YN ++ +G A + +LFRLM+ + I + VT S++ YG
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 238
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ EK ++++ + N I +++ ++ ++ +G++ + + ++ G + D+V
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 298
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y+TM AY G+ HAK
Sbjct: 299 YQTMXVAYERAGLVAHAKRL 318
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 95 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 153
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 154 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 213
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 214 FRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y + A+ RAG + + L ++S P +
Sbjct: 274 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLHELKS----PDNIP 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 330 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMR 389
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 390 GLGYFPDSNVIALVLNAY 407
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 40/298 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 167 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQ-N 225
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 226 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 285
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D A+ +G + ++ + +S P +IL AG
Sbjct: 286 KLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 341
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + + +
Sbjct: 342 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANVIEVF 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+R G+ F D++ I L +++AYG+L F + GV MQ
Sbjct: 386 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQ 424
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G C +A + + M D G + + +LSAY + KA S E MK T + +PD
Sbjct: 111 GSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGT-NIRPD 169
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG--IRPNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K + + + S M + RP+ VT+ ++I Y + +
Sbjct: 170 TTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAV 229
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
ML+E +P++ + N + A+ + G +++ + +G P + ++ L+ ++G+
Sbjct: 230 FSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGR 289
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + V + M++ +V+YN ++DA+G G L Q + R M + I P+ V+
Sbjct: 290 SQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVS 349
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G G+ + SVL + I L+T+ N + +Y + + + + M+
Sbjct: 350 ICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSME 409
Query: 301 QRGCKPDKVTYRTMV 315
+ KPD VT+ ++
Sbjct: 410 NKTTKPDSVTFTILI 424
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 4/343 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F M+ EG N S+ AL+SAY G+ +AFS+ + MK + C PDV +Y
Sbjct: 222 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFC-PDVVSY 280
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI + ++ + + + M +PN V+YN L+DAYG + L +M
Sbjct: 281 TSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQ 340
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+V ++ L A G GQ ++ + GI + N + SY G +EK
Sbjct: 341 DGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEK 400
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M+ VT+ I+I R ++ F+ M RI S S++
Sbjct: 401 AINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 460
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AY G+ K S+ + S D V + +++AY + + ++ + + M+ +
Sbjct: 461 AYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQL 520
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
D + +++A++ N A L E M E + +F
Sbjct: 521 DSIACSALMKAFNKG---NQASNVLILAEIMKEKGIPFNDANF 560
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A +++E M P +T++
Sbjct: 47 DQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRAA-IPPSRSTFNN 105
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +C + + + M+ G+ P+ VT+N ++ AY +++ M +
Sbjct: 106 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTN 165
Query: 129 CEPDVWTMN----CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T+N C ++ I+ EK + +P + TF ++ Y G
Sbjct: 166 IRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREK--RSECRPDVVTFTSIIHLYSVRGQI 223
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E AV M IV+YN +I A+ G K+ +F M+ P V+ SL
Sbjct: 224 EDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 283
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +G + +P + V + + + V +N L+DAYG + +L M+Q G
Sbjct: 284 ISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGI 343
Query: 305 KPDKVTYRTMVRAYSTNGMK 324
P+ V+ T++ A G K
Sbjct: 344 HPNVVSICTLLAACGRFGQK 363
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 40/336 (11%)
Query: 41 GLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT 100
G + + + MKN + + Y+++I+ + D+ + L +M +P+ T
Sbjct: 8 GSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVET 67
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
YN LI+A+GRA + + ML P T N + A G+ G + +K
Sbjct: 68 YNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMT 127
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA------FG 214
G+ P + T NI+L +Y + K + E M+ + T NIVI +G
Sbjct: 128 DNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYG 187
Query: 215 RA-------------------------------GDLKQMEYLFRLMRSERIKPSCVTLCS 243
+A G ++ + +F M +E IKP+ V+ +
Sbjct: 188 QAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNA 247
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ AY G ++ SV + S D V + L+ +GR + A + V ++M++
Sbjct: 248 LISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNK 307
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
CKP+ V+Y ++ AY +NG + + D++ +M++
Sbjct: 308 CKPNLVSYNALMDAYGSNG---YLPQAVDILREMEQ 340
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 44/276 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A F+ M+D +++ +++++ AY + G KA SL +K + C PD+ TY+
Sbjct: 434 EEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGS-GCCPDLVTYTA 492
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + ++KV AL +M I+ +++ + L+ A+ + + + L L +++ E
Sbjct: 493 MINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNV-LILAEIMKEK 551
Query: 129 CEP------------------------------------DVWTMNCTLRAFGNSGQIDTM 152
P + T+N L+ G SG+ + M
Sbjct: 552 GIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIM 611
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + +F + G +INT++ILL + AG + K V+++M + YN ++
Sbjct: 612 IKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFF 671
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPS-CVTLCSLVRA 247
GD + + + ER+ C++L S+V A
Sbjct: 672 AQHCGDAE-----YAAVIKERVGMRLCISLISVVLA 702
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 9/317 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q + A G NT + + + +Y G ++KA +L M+N +PD
Sbjct: 358 GRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTT-KPD 416
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ILI C + +++ +M I ++ Y+++I AY + + E
Sbjct: 417 SVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFN 476
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ C PD+ T + A+ S + + Y++ ++ IQ + L+ ++ K
Sbjct: 477 SLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGN 536
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + E M++ + + ++ A D ++ L LM S T+
Sbjct: 537 QASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTIN 596
Query: 243 SLVRAYGHAGKPEKLGSVL-RFID-NSDIMLDT--VFFNCLVDAYGRLKCFAEMKGVLEV 298
L++ G +GK E + + RF+ S + ++T + L+ A G+ + + E VL+
Sbjct: 597 HLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSA-GKWRKYIE---VLQW 652
Query: 299 MQQRGCKPDKVTYRTMV 315
M G +P Y ++
Sbjct: 653 MNDAGIQPSHAMYNNIL 669
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 151/336 (44%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K+ ++A ELF+ + GC N ++TA++ ++G + E M + C P
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS-SCVP 176
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+++I KA + M +G P+T+TY TLID + +A E L
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML++ EP T + F I+ ++ + + G +P + F LL Y
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ V+ M + ++ Y +ID G + + ++F M + P +T
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++++ + G E G +L + S + D +N L+D Y +L+ + GV + M
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G KP+ VT+ ++ +G + A F++++EK
Sbjct: 417 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 452
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+ M + GC+ FT+LLS Y G ++A+ +L M C PDV Y+ L
Sbjct: 266 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM-TARGCAPDVILYTSL 324
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + + M +G P+ +TY T+I + + L M
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 384
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MS 188
PD + N + + ++D Y++ ++GI+P+ TFN+L+ K G ++ S
Sbjct: 385 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E ++K T+V+Y I+ID G+AG + + F+ M I P C T SL+ +
Sbjct: 445 LFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSL 504
Query: 249 GHAGK-PEK---LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
AG+ PE + +++ N D+ + L+D+ V + M +RGC
Sbjct: 505 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS----SMVDTAWDVFQEMMKRGC 560
Query: 305 KPDKVTYRTMVRAYSTNG 322
P++VTY+ + R + G
Sbjct: 561 APNEVTYKVLRRGFRAAG 578
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 143/365 (39%), Gaps = 30/365 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------ 55
L + ++A++ F +M+D GC+ + +FT L+ + ++G LL
Sbjct: 17 LASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDV 76
Query: 56 ------------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMST 91
TP DV +Y+ +IK + D+ L ++ T
Sbjct: 77 FLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKT 136
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
G PN V Y +ID +A + +M C P T + + +
Sbjct: 137 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPD 196
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
K +E+ G P T+ L+D + KA ++ +++ M T VTY ++
Sbjct: 197 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 256
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
F + + + + + MR +P SL+ Y G+ E+ VL +
Sbjct: 257 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 316
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
D + + L+D E + V + M ++GC PD +TY T+++ +S G A E
Sbjct: 317 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 376
Query: 332 DLVEK 336
+L+ K
Sbjct: 377 ELMAK 381
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 153/340 (45%), Gaps = 11/340 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A ++F+ MV +GC +T ++T L+ + ++ D+A LL+ M T +P
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML-TKGPEP 246
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
TY ++ K ++ + +++ M +G P + +L+ Y GRA+ E
Sbjct: 247 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE---EAY 303
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M + C PDV + ++G++ ++ G P T+ ++ ++
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G+ E ++E M K YN ++D + + + Q ++ M + IKP+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT L+ GK ++ S+ + ++ ++ V + L+D G+ +E +
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQ 483
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M RG P+ TY +++ + + G AK+ LVE M
Sbjct: 484 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK---LVEDM 520
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ ++A ++ MV G N +F L+ + G D+AFSL + M + P +
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTL 459
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+Y+ILI KA + +M +GI P TY +LI + +A E + +
Sbjct: 460 VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV + + +S +DT +++ G P+ T+ +L + AG
Sbjct: 520 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579
Query: 184 FEKMSAVMEYMQKYHYSWTI 203
+ AV K H+S +
Sbjct: 580 ALDLEAV-----KQHFSQGV 594
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K E A E+ + M G + ++ +L+ Y + D+AF + + M + +P+
Sbjct: 365 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS-GIKPNA 423
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T+++L+ K D+ +L +M + + P V+Y LID G+A +E L
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQ 483
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P+ T + + +G+I +K E G+ P + ++ L+ +
Sbjct: 484 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS 543
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF---GRAGDLKQMEYLF 226
+ V + M K + VTY ++ F GRA DL+ ++ F
Sbjct: 544 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 590
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 8/244 (3%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P V+YNT+I E M+ CEPDV + F +GQ
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK--MSAVMEYMQKYHYSWTIVTYNIVI 210
K + +P + + ++ Y KAG + AV S +++Y VI
Sbjct: 62 HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTP-----KASLDVISYTTVI 115
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ + + LF +++ P+ V +++ AG+ E + S +
Sbjct: 116 KGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ ++D + + + V E M Q+GC PD +TY T++ +S + A++
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 331 QDLV 334
D++
Sbjct: 236 LDVM 239
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +A FQ M+D G ++T+L+ + ++G +A L+E M P
Sbjct: 469 LGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL-GVNP 527
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL---IDAYGRA 111
DV YS LI + + D + +M +G PN VTY L A GRA
Sbjct: 528 DVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580
>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 713
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 54/355 (15%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLF---DKAFSLLEHMKNTPDCQPDVNTYSIL 69
E + ++D G ++ +F +++A R G D+ ++L+ + PD+ T SIL
Sbjct: 116 EAHRILMDMGLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGR----IVPDLTTCSIL 171
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + +A + KV +L++M T GI+ + + YN+LI YG+A +F E+EL + + +E
Sbjct: 172 INAFGRARDWHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIA 231
Query: 130 EP----------DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
D+ T N L +G +G++D + + + + +G+QP + TF+ L+++YG
Sbjct: 232 RREDLGNSSLAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYG 291
Query: 180 KAGHFEKMSAVMEYMQKYHY----------------------SWTIV------------- 204
KA H++ V+E +KY+Y +W I+
Sbjct: 292 KASHYD--GEVLELFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSE 349
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +I AFGR ++ E M++ +KP + L+ AY +G+ K ++ +
Sbjct: 350 TYNSLILAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKM 409
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+++ N L+ Y R + E Q RG KP++ ++ M+ A +
Sbjct: 410 KEENLIYGIAGHNSLLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALT 464
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 59/382 (15%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F+ V G + + L+S Y + G + +L+ M+ P V+ Y++++
Sbjct: 42 AEAVFEEFVKSGMSPSHDDYVILMSGYTKCGSLQRGIGILQKMREA-GIHPQVSAYNVIL 100
Query: 71 KSCLKAFAFD-----KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ C ++ D + +L DM G++ ++VT+N +++A R +++ M
Sbjct: 101 EGCTRSTRGDINGMMEAHRILMDM---GLQQDSVTFNIIMNALNRVGRIRDVDRYWALMR 157
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
PD+ T + + AFG + ++ + ++ GI+ + +N L+ YGKAG F
Sbjct: 158 MGRIVPDLTTCSILINAFGRARDWHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFY 217
Query: 186 KMSAVM----------EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
++ V+ E + ++ +VTYN ++D +G+AG L + Y F M+ ++
Sbjct: 218 EVELVVKSLRAEIARREDLGNSSLAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQ 277
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN------------------ 277
P +T SLV AYG A + G VL + D VF+N
Sbjct: 278 PDVLTFDSLVNAYGKASHYD--GEVLELFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKI 335
Query: 278 -----------------CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
L+ A+GR + E + LE M+ G KP ++ ++ AYS
Sbjct: 336 LEDMKAAGFMPTSETYNSLILAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSL 395
Query: 321 NGMKNHAKEFQDLVEKMDETCL 342
+G + + L+ KM E L
Sbjct: 396 SG---QIPKGEKLIVKMKEENL 414
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 12/283 (4%)
Query: 49 LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+ + M+ PD +PD Y +I + A + +A+ + G+ P+ Y L+ Y
Sbjct: 9 VFQWMQALPDLKPDELVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVILMSGY 68
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS--GQIDTMEKCYEKFQSAGIQP 166
+ L KM P V N L S G I+ M + + G+Q
Sbjct: 69 TKCGSLQRGIGILQKMREAGIHPQVSAYNVILEGCTRSTRGDINGMMEAHRILMDMGLQQ 128
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
TFNI++++ + G + M+ + T +I+I+AFGRA D +++ +
Sbjct: 129 DSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARDWHKVDLVL 188
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAG---KPEKLGSVLRF-------IDNSDIMLDTVFF 276
M + IK + SL+ YG AG + E + LR + NS + D V +
Sbjct: 189 AEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSSLAFDLVTY 248
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
N L+D YG+ ++ M++ G +PD +T+ ++V AY
Sbjct: 249 NTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYG 291
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ LL YG++G D MK + QPDV T+ L+ + KA +D +L
Sbjct: 247 TYNTLLDVYGKAGRLDDVIYWFGEMKKS-GVQPDVLTFDSLVNAYGKASHYDG--EVLEL 303
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ + V YNTL+ +G+ +A+ L M + P T N + AFG Q
Sbjct: 304 FRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGRGSQ 363
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
E E+ ++ G++P +F+ LL++Y +G K ++ M++ + + I +N
Sbjct: 364 WQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLIYGIAGHNS 423
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-PEKLGSVLRFIDNS 267
++ + RAGD+ + + ++ KP+ + ++ A E+ + + ++N+
Sbjct: 424 LLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDERFWGIAQDLENA 483
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ L+ A GR + +L ++++ GC PD
Sbjct: 484 PFDVHFAIHGALLSALGRCGQSPDADRLLGILKRLGCSPD 523
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ LL +G+ G + A+ +LE MK P TY+ LI + + + + + L M
Sbjct: 316 YNTLLFMFGKGGHYADAWKILEDMK-AAGFMPTSETYNSLILAFGRGSQWQEAENTLERM 374
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G++P +++ L++AY + + E +VKM E+ + N LR + +G I
Sbjct: 375 KANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLIYGIAGHNSLLRFYMRAGDI 434
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTIVTYNI 208
++ + YE Q+ G +P+ ++F ++++ K E+ + + ++ + +
Sbjct: 435 GSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDERFWGIAQDLENAPFDVHFAIHGA 494
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP--------EKLGSV 260
++ A GR G + L +++ P +C+L G A + ++L ++
Sbjct: 495 LLSALGRCGQSPDADRLLGILKRLGCSPD---ICNLFEE-GEAAQSKLSGEEAWKRLATL 550
Query: 261 LRFIDNSDIMLDTV--FFNCLVDAYGRL 286
++ + ++ F N L+DA R
Sbjct: 551 FNSLEQEGVNMEAERNFHNALIDALWRF 578
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 4/169 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ Q ++A + M G QSF+ LL AY SG K L+ MK +
Sbjct: 358 FGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKE-ENLIY 416
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ L++ ++A + T+G +PN ++ +I+A + E +
Sbjct: 417 GIAGHNSLLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDERFWGI 476
Query: 122 VKMLSEDCEPDVW--TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ L E+ DV L A G GQ ++ + G P I
Sbjct: 477 AQDL-ENAPFDVHFAIHGALLSALGRCGQSPDADRLLGILKRLGCSPDI 524
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
++G C K + A ++F+ M +GC N ++T L+ D+A L MK+ D
Sbjct: 260 IMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDD-D 318
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEM 117
C P V TY++LIK+ + + L+ +M +GI+PN TY LID+ + K+
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAR 378
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
EL L +ML + P+V T N + + G I+ E +S ++P+ T+N L+
Sbjct: 379 EL-LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y K + K V+ M + +VTYN +ID R+G+ L LM + P
Sbjct: 438 YCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T S++ + + + E+ + ++ D++ + V + L+D Y + E +LE
Sbjct: 497 PWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLE 556
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M + C P+ +T+ ++ T+G A ++ + K+D
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA EL M+++G N ++ AL++ Y + G+ + A ++E M++ + +P+ TY+
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR-NLRPNTRTYNE 433
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LIK K K +L+ M + + P+ VTYN+LID R+ F L M
Sbjct: 434 LIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD WT + + S +++ ++ + + P++ + L+D Y KAG +
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M + +T+N +I G LK+ L M ++P+ T L+
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + +S D + + Y R + + ++ M++ G PD
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672
Query: 309 VTYRTMVRAYSTNGMKNHA 327
TY ++++ Y G N A
Sbjct: 673 FTYSSLIKGYGDLGRTNSA 691
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 2/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ +++ M+++ N ++ +++ Y + G ++A + M PD TY+
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS-MIVEAGLDPDFFTYTS 258
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + D + +M +G R N V Y LI + E VKM +D
Sbjct: 259 LIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD 318
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P V T ++A S + ++ + GI+P+I+T+ +L+DS EK
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAR 378
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + ++TYN +I+ + + G ++ + LM S ++P+ T L++ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ +G + + ++ ++ D V +N L+D R F +L +M RG PD
Sbjct: 439 CKRNVHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDP 497
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +M+ + + A + D +E+ D
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 165/388 (42%), Gaps = 61/388 (15%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ ++A +LF M D+ C +++T L+ A S +A +L++ M+ +P+++T
Sbjct: 302 RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEK-GIKPNIHT 360
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE----MEL-- 119
Y++LI S +K + LL M +G+ PN +TYN LI+ Y + M + +EL
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 120 ----------------------------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
L KML PDV T N + SG D+
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ G+ P T+ ++DS K+ E+ + + +++ +V Y +ID
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK---LGSVLRFID-NS 267
+ +AG + + + M S+ P+ +T +L+ GK ++ L + ID
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600
Query: 268 DIMLDTVFFNCLVD------AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ DT+ + L+ AY R + M G KPD TY T ++ Y
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRF----------QQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 322 GMKNHAKEFQDLVEKMDETCLAMKRPDF 349
G ++ +D+V KM E ++ PD
Sbjct: 651 G---RLQDAEDMVAKMKENGVS---PDL 672
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 149/371 (40%), Gaps = 57/371 (15%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +AH + + M+ + C N+ +F AL+ G +A +LLE D Q
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA-TLLEEKMVKIDLQ 599
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V+T +ILI LK FD M + G +P+ TY T I Y R + E
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF-----NILL 175
+ KM PD++T + ++ +G+ G+ ++ ++ G +PS +TF ++L
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719
Query: 176 DSYGKAGHFEK----MSAVMEY---------MQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
YGK E MS +ME+ M ++ + +Y ++ G+L+
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779
Query: 223 EYLF-RLMRSERIKPSCVTLCSLVRA-------------------YGH------------ 250
E +F + + E I PS + +L+ GH
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839
Query: 251 ----AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ E+ SV + + D + + ++D G+ + VM++ GC
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTF 899
Query: 307 DKVTYRTMVRA 317
TY ++
Sbjct: 900 SSQTYSLLIEG 910
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 115/274 (41%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ Y+ L+ S + D+++ + +M + PN TYN +++ Y + E +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ +PD +T + + +D+ K +++ G + + + L+
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + M+ T+ TY ++I A + + L + M + IKP+ T
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + K EK +L + +M + + +N L++ Y + + V+E+M+ R
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+P+ TY +++ Y + ++E+
Sbjct: 423 NLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLER 456
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
Y I YN ++++ R G + +M+ ++ M +++ P+ T +V Y G E+
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEAN 238
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ I + + D + L+ Y + K V + M +GC+ ++V Y ++
Sbjct: 239 QYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGL 298
Query: 319 STNGMKNHAKEFQDLVEKM-DETCLAMKR 346
++ E DL KM D+ C R
Sbjct: 299 C---VERRIDEAMDLFVKMKDDDCYPTVR 324
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 1/327 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+F+AM G + +SF L+ + R+G ++A + M+ PDV ++S
Sbjct: 246 DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR-RVTPDVVSFSC 304
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + D L +M G+ P+ V Y +I + RA + E +M++
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T N L ++ E+ + + G+ P + TF L+ Y + G+ EK
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + IVTYN +ID R GDL + L+ M S I P+ VT L+ ++
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + L + N I+ + + +N ++ Y R ++ + L M+ PD
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+TY T++ Y G + A ++E
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIME 571
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 6/336 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E + M + G + +T ++ + R+GL +A + + M C PDV TY+
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF-GCLPDVVTYNT 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K + LL++M +G+ P+ T+ TLI Y R E L +S+
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI-EKALQFFDTISDQ 433
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD+ T N + G + + ++ S I P+ T++IL+DS+ + G +
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A ++ M I+TYN +I + R+G++ + + MR +++ P +T +L+
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y GK + ++L+ ++N ++ D V +N ++ + E V + M RG +PD
Sbjct: 554 YVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPD 613
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ TY +M+ + G N K FQ L ++M + LA
Sbjct: 614 RYTYMSMINGHVVAG--NSKKSFQ-LHDEMLQKGLA 646
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 160/339 (47%), Gaps = 17/339 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG---LFDKAFSLLEHMKNTPDCQ 60
+ ++P +A E F+ ++D + ALL+A R+G L A+ L+
Sbjct: 101 QSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLVL------SSN 154
Query: 61 PDVNTYS--ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+VNTY+ I++ S K F +V ++S+M + + P+ VT+N ++DA RA
Sbjct: 155 SEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAM 214
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ M+S+ +P + T N L+ +G+ D + + + G+ P + +FN+L+ +
Sbjct: 215 ALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGF 274
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG E+ + M+ + +V+++ +I F R G++ R MR + P
Sbjct: 275 CRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
V ++ + AG + LR D + D V +N L++ + + ++ + +
Sbjct: 335 VIYTMVIGGFCRAG---LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL 391
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L M++RG PD T+ T++ Y +G A +F D +
Sbjct: 392 LNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 3/256 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A EL M + G + +FT L+ Y R G +KA + + + +
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ-RLR 436
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI + K L DM ++ I PN VTY+ LID++
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+++ P++ T N ++ + SG + ++ K + + P + T+N L+ Y K
Sbjct: 497 LDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVK 556
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + +++ M+ + VTYN++I F G++++ +++++ M + I+P T
Sbjct: 557 EGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYT 616
Query: 241 LCSLVRAYGHAGKPEK 256
S++ + AG +K
Sbjct: 617 YMSMINGHVVAGNSKK 632
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 1/304 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ ++ A R+G + A +L++ M + +P + TY+ ++K L+ +DK + +
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMV-SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA 254
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ P+ ++N LI + RA E +M PDV + +C + F G+
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + + + G+ P + +++ + +AG + V + M + +VTYN
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++ + L E L M+ + P T +L+ Y G EK I +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D V +N L+D R + + + M R P+ VTY ++ ++ G ++A
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494
Query: 329 EFQD 332
F D
Sbjct: 495 AFLD 498
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 7/245 (2%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
NT T N ++ +Y + F E++ + +M PDV T N + A +G ++
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ S GI+P + T+N +L + G ++K V M + + ++N++I F RA
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G+L++ ++ MR R+ P V+ L+ + G+ + LR + +M D V +
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM--KNHAKEFQDLV 334
++ + R E V + M GC PD VTY T++ NG+ + + ++L+
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL-----NGLCKERRLSDAEELL 392
Query: 335 EKMDE 339
+M E
Sbjct: 393 NEMKE 397
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q + A MV++G N ++ +++ Y RSG K L M++ PD+ TY
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD-KVMPDLITY 547
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +K + LL M + ++P+ VTYN +I + E + KM +
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
EPD +T + +G + +++ G+ P
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 151/336 (44%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K+ ++A ELF+ + GC N ++TA++ ++G + E M + C P
Sbjct: 373 LADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS-SCVP 431
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+++I KA + M +G P+T+TY TLID + +A E L
Sbjct: 432 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML++ EP T + F I+ ++ + + G +P + F LL Y
Sbjct: 492 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 551
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ V+ M + ++ Y +ID G + + ++F M + P +T
Sbjct: 552 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 611
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++++ + G E G +L + S + D +N L+D Y +L+ + GV + M
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 671
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G KP+ VT+ ++ +G + A F++++EK
Sbjct: 672 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+ M + GC+ FT+LLS Y G ++A+ +L M C PDV Y+ L
Sbjct: 521 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM-TARGCAPDVILYTSL 579
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + + M +G P+ +TY T+I + + L M
Sbjct: 580 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 639
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MS 188
PD + N + + ++D Y++ ++GI+P+ TFN+L+ K G ++ S
Sbjct: 640 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 699
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E ++K T+V+Y I+ID G+AG + + F+ M I P C T SL+ +
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSL 759
Query: 249 GHAGK-PEK---LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
AG+ PE + +++ N D+ + L+D+ V + M +RGC
Sbjct: 760 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS----SMVDTAWDVFQEMMKRGC 815
Query: 305 KPDKVTYRTMVRAYSTNG 322
P++VTY+ + R + G
Sbjct: 816 APNEVTYKVLRRGFRAAG 833
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 7/328 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ELF+ + GC N ++T ++ GL+D +E K D DV +Y+
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQ-----GLYDA--QRMEEAKAFFDEALDVISYTT 368
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+IK + D+ L + T G PN V Y +ID +A + M
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P T + + + K +E+ G P T+ L+D + KA ++
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M T VTY ++ F + + + + + MR +P SL+ Y
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+ VL + D + + L+D E + V + M ++GC PD
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+TY T+++ +S G A E +L+ K
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAK 636
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 153/340 (45%), Gaps = 11/340 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A ++F+ MV +GC +T ++T L+ + ++ D+A LL+ M T +P
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML-TKGPEP 501
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
TY ++ K ++ + +++ M +G P + +L+ Y GRA+ E
Sbjct: 502 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE---EAY 558
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M + C PDV + ++G++ ++ G P T+ ++ ++
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G+ E ++E M K YN ++D + + + Q ++ M + IKP+
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT L+ GK ++ S+ + ++ ++ V + L+D G+ +E +
Sbjct: 679 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQ 738
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M RG P+ TY +++ + + G AK+ LVE M
Sbjct: 739 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK---LVEDM 775
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 2/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +KA ELF M GC+ S+ ++S D+A+ M + C+P
Sbjct: 30 LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN-GCEP 88
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV ++ LI KA +V +L + + + RP+ Y ++I Y +A L
Sbjct: 89 DVIAFTTLIHGFCKA-GQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKIL 147
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ML+ C PD + G++D + +E+ + +G TF L+++
Sbjct: 148 EEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNH 207
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M + Y + + +I A +AG + + +++ + ++++ S V
Sbjct: 208 GKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAY 267
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ Y G+ + +L + D D +N LV + R + + +++
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS 327
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
GCKP+ TY T+++ AK F D
Sbjct: 328 YGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 148/363 (40%), Gaps = 34/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A EL++ M++ G + + +L+ A ++G D+A + + + V S+
Sbjct: 211 DEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSL 270
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE- 127
+ C D ++ LL + P+ TYN L+ + RA + L L K+LS
Sbjct: 271 MDGYCKLGRVDDGLKLLLQMVECDNF-PDIQTYNILVAGFSRANRLDD-ALELFKLLSSY 328
Query: 128 DCEP-----------------------------DVWTMNCTLRAFGNSGQIDTMEKCYEK 158
C+P DV + ++ +S +ID + +EK
Sbjct: 329 GCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEK 388
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
++AG P++ + ++D KAG E E M T TY +VID +A
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L +F M + P +T +L+ + A K ++ +L + V +
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+V + +L E K V+ M++RGC+P + +++ Y + G A +Q L E
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA--YQVLTEMTA 566
Query: 339 ETC 341
C
Sbjct: 567 RGC 569
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 127/327 (38%), Gaps = 39/327 (11%)
Query: 44 DKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT 103
++A L+ M +T PDV +I++ KA DK L +M + G P V+YNT
Sbjct: 2 EEALDCLKEM-HTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ--------------- 148
+I E M+ CEPDV + F +GQ
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 149 -------------------IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+DT K E+ +AG P + +L+D K G ++
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M+K VT+ +I+A G L + L+R M +P SL+ A
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK--PD 307
AGK ++ + + + + V +N L+D Y +L + G+ ++Q C PD
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDD--GLKLLLQMVECDNFPD 298
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLV 334
TY +V +S + A E L+
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLL 325
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ ++A ++ MV G N +F L+ + G D+AFSL + M + P +
Sbjct: 655 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTL 714
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+Y+ILI KA + + +M +GI P TY +LI + +A E + +
Sbjct: 715 VSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 774
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV + + +S +DT +++ G P+ T+ +L + AG
Sbjct: 775 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834
Query: 184 FEKMSAVMEYMQKYHYSWTI 203
+ AV K H+S +
Sbjct: 835 ALDLEAV-----KQHFSQGV 849
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K E A E+ + M G + ++ +L+ Y + D+AF + + M + +P+
Sbjct: 620 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS-GIKPNA 678
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T+++L+ K D+ +L +M + + P V+Y LID G+A +E
Sbjct: 679 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQ 738
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P+ T + + +G+I +K E G+ P + ++ L+ +
Sbjct: 739 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS 798
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF---GRAGDLKQMEYLF 226
+ V + M K + VTY ++ F GRA DL+ ++ F
Sbjct: 799 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 845
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +A FQ M+D G ++T+L+ + ++G +A L+E M P
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL-GVNP 782
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL---IDAYGRA 111
DV YS LI + + D + +M +G PN VTY L A GRA
Sbjct: 783 DVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 835
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 5/190 (2%)
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
C ++ + G+ P + NI+L+ KA +K + M TIV+YN VI
Sbjct: 7 CLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLA 66
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ + F M +P + +L+ + AG+P+ +G +L D
Sbjct: 67 SIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQ-VGHMLLNQALKRFRPDVF 125
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ ++ Y + +LE M GC PD Y ++ G + A E L
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE---LF 182
Query: 335 EKMDET-CLA 343
E+M ++ CL
Sbjct: 183 ERMRKSGCLG 192
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 4/329 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA E+ MVD G +T +F +++ ++G F++A SLL M +C+P
Sbjct: 20 LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRP 78
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+ LI K D+ + L+ + + G P+ VTY+ L D + E +
Sbjct: 79 SCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 138
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C P++ T N + + + + + E S+G P + T+ I++D K
Sbjct: 139 KEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKE 198
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K ++E M K + +++TY +++ R G + + ++F+ M S+ +
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 258
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SLV Y + + ++ V+ I + + +N L+D Y + E+ V E M
Sbjct: 259 VSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVFEDMAC 315
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
RGC P+ TY ++ +G + A F
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPF 344
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 6/318 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK+ ++ +F+ M GC N +++ ++ + G D+AF LE M ++
Sbjct: 294 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAG 352
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PDV +Y+I+I KA + + +L M GI P+ VTYNTL+ + + + F +
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M+ +PD T N + + ++ D E +E ++ + + T+N ++D
Sbjct: 413 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 472
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G ++ +M++M + VTYNI ID + G L + L M + R + S
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS 532
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T+ + + KL + + I T FN L+DA+ + K E +LE
Sbjct: 533 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT--FNLLIDAFTKTKRLDEALTLLE 590
Query: 298 VMQQRGCKPDKVTYRTMV 315
+M QRGC P +TY ++
Sbjct: 591 LMVQRGCSPSVITYNMVI 608
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ILI KA DK +L +M +G+ P+TVT+N+++D +A F
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M +C P T N + +D + ++F S+G P + T++IL D K
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ +++ M + +VTYN +ID +A ++ L + S P VT
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+V G+ +K ++ + + + L++ R E + + M
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ C D + Y ++V Y + A++ D
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 145/362 (40%), Gaps = 70/362 (19%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A EL + M GC N ++ L+ ++ +KA+ LLE + ++
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS-GFV 182
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+I++ K DK ++ M +G P+ +TY L++ R E
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242
Query: 121 LVKMLSEDCEPD--------------------------------VWTMNCTLRAFGNSGQ 148
+M+S+DC D + N + + G+
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 302
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + +E G P+I T+NI++D K G ++ +E M +V+YNI
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID LF+ A KP++ VL + +
Sbjct: 363 IIDG------------LFK-----------------------ASKPKEARQVLDQMIQAG 387
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I D V +N L+ + + + F + G+L+ M + G PD VTY T++ S A
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447
Query: 329 EF 330
E
Sbjct: 448 EL 449
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 7/252 (2%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M+ + + P+ TYN LID +A + L +M+ PD T N + +G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ +PS T+N L+ K + ++ +++ + +VTY+I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ D + G + + L + M P+ VT +L+ A K EK +L + +S
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 269 IMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ D V + +VD GRL +M +E M +RGC P +TY ++ G +
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKM---VEGMLKRGCTPSVITYTALMEGLCRTGRVD 237
Query: 326 HAKE-FQDLVEK 336
A F+++V K
Sbjct: 238 EAHHIFKEMVSK 249
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 6/271 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + A + + M+ G D + ++ L+S ++ A+ L+ M
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I K + L+ M+ G+ NTVTYN ID + E L
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKA 181
+M D D + + + Q+D K E G+ + +TFN+L+D++ K
Sbjct: 523 EM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 579
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++E M + S +++TYN+VI + + + LF M I S V+
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
L+ G+ ++ VL + +SD +D
Sbjct: 640 TVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 16/259 (6%)
Query: 11 AHELFQAMVDEGCDANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A+EL M+ GC + ++ ++ + G +A L++HM + + TY+I
Sbjct: 446 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG-HGVEANTVTYNIF 504
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI------DAYGRAKMFAEMELTLVK 123
I K D+ +LLS+M T +R + V+Y T+I + RA A E+ VK
Sbjct: 505 IDRLCKEGRLDEASSLLSEMDT--LR-DEVSYTTVIIGLCKAEQLDRASKLAR-EMVAVK 560
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
L T N + AF + ++D E G PS+ T+N+++ K
Sbjct: 561 GLC----ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+K + + M + V+Y ++I G K+ + M S + +
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676
Query: 244 LVRAYGHAGKPEKLGSVLR 262
L A G+ E+ +LR
Sbjct: 677 LYLALRGQGRGEEAAELLR 695
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 151/326 (46%), Gaps = 1/326 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +K + LF M+D G + ++T ++ ++ LFD+A + + M + +P+ TY
Sbjct: 214 QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN-GFKPNNYTY 272
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI L + +V +L +MS +G++P+ TY +L++ + E M+
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +P V T + + G + M + G+ P + FNI +Y K G +K
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M+++ S +V Y +IDA + G + E F M +E + P+ V SLV
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
K E+ ++ + + I + VFFN L+ + E + ++++M+ G +P
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQD 332
D +Y ++ Y G + A++ D
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFD 538
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 11/342 (3%)
Query: 9 EKAHELFQAMVDEGCD---ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
E A F MV E D N +++ L+ + R G + F+ + T +
Sbjct: 69 ELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAI 128
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+L C + + LL M G P+TV+Y L+ K AE L L+ M+
Sbjct: 129 NQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKR-AEEALELLHMM 187
Query: 126 SED----CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++D C P+V + + + F GQ+D + + GI P + T+ ++D KA
Sbjct: 188 ADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKA 247
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F++ V + M + TYN +I + G K++ + M + +KP C T
Sbjct: 248 QLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTY 307
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ G+ + + I + L+ Y +EM L++M +
Sbjct: 308 GSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVE 367
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
G PD + AY+ GM + A D+ KM + L+
Sbjct: 368 NGLSPDHHIFNIFFSAYAKCGMIDKA---MDIFNKMRQHGLS 406
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 137/335 (40%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C++ A F +M+ +G ++ L+ Y G + S L+ M PD
Sbjct: 318 GRCRE---ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN-GLSPD 373
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I + K DK + + M G+ PN V Y LIDA + + E+
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E P++ N + + + E+ + GI P+ FN L+ + G
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ M+ +Y +I + G + E +F M S + P+ VT
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y A + + + R + + V +N ++ + K F+E K + M
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613
Query: 303 GCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
G K D TY ++ +N + K FQ L K
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 648
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 134/364 (36%), Gaps = 36/364 (9%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TP 57
G CK ++A +FQ M+D G N ++ L+ Y G + + +LE M P
Sbjct: 243 GLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKP 302
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
DC +P V+TY ILI A ++ + L
Sbjct: 303 DCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL 362
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G+ P+ +N AY + M + KM P+V + A
Sbjct: 363 DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKL 422
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++D E + + + G+ P+I FN L+ +E+ ++ M V +
Sbjct: 423 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 482
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I G + + L LM ++P + L+ Y G+ ++ V + +
Sbjct: 483 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS 542
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ V +N L+ Y + + M ++G P VTY T++ +
Sbjct: 543 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 602
Query: 327 AKEF 330
AKE
Sbjct: 603 AKEL 606
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 42/303 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTAL---LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
E+A EL M+D+G N F L L GR + L+EH+ +PD +
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV----GVRPDAFS 516
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------------- 111
Y+ LI D+ + + M + G+ P VTYNTL+ Y A
Sbjct: 517 YTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 576
Query: 112 ---------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
K F+E + + M++ + D++T N L S +D
Sbjct: 577 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 636
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
K ++ S G+Q +I TF I++ + K G E + + +VTY +V
Sbjct: 637 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 696
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ G L++ + LF M P+ L +LVR H G + G+ L +D +
Sbjct: 697 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 756
Query: 271 LDT 273
++
Sbjct: 757 VEA 759
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K+ +A EL+ M++ G + ++ +L+ +S D+AF + + + + Q
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL-CSKGLQL 652
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++I+I + LK + L + + G+ PN VTY + + E +
Sbjct: 653 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 712
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M P+ +N +R + G I K +T ++L+ +
Sbjct: 713 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSD 772
Query: 182 GHFEKMSAVMEYMQKYHY 199
+ ++ E KYH+
Sbjct: 773 EYQHHAKSLPE---KYHF 787
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 159/369 (43%), Gaps = 45/369 (12%)
Query: 7 QPEKAHELFQAMVD---EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ E+A EL M D C N S+ +++ + G DKA++L M + P+V
Sbjct: 181 RAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQ-GIPPNV 239
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+I+I KA D+ + + M +G+RPN VTY LI Y + E+ L +
Sbjct: 240 VTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKE 299
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + EPD +T L G+ K ++ GI+P ++ + I+L Y G
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359
Query: 184 FEKMSAVMEYM-----QKYHYSWTI------------------------------VTYNI 208
+M + ++ M HY + I V Y
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+IDA + G + E F M +E + P+ V SLV K EK G + + N
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479
Query: 269 IMLDTVFFN---CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I + VFFN C + GR+ + + ++++M++ G +PD ++Y ++R + G +
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRV---MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTD 536
Query: 326 HAKEFQDLV 334
A + D++
Sbjct: 537 EASKLLDIM 545
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 4/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A F M++EG N FT+L+ ++KA L M N P
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ-GIHP 482
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V ++ ++ + K Q L+ M G RP+ ++YN LI + E L
Sbjct: 483 NVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLL 542
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
MLS +P+ T N L + G+ID +++ S GI P + T+N +L K
Sbjct: 543 DIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKT 602
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + + M W+I TYNI+++ + + + +F+ + S+ ++ +T
Sbjct: 603 RRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITF 662
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ A G+ E ++ I + ++ D + + + E G+ M++
Sbjct: 663 NIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEK 722
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
GC P+ + +VR G + A + + K+DE
Sbjct: 723 SGCAPNSLMLNFLVRRLLLRGDISRAGAY---LSKIDE 757
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 12/337 (3%)
Query: 15 FQAMVDEGCD---ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
F M+ + C + +++ L+ + R G + F+ + T DV + L+K
Sbjct: 79 FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138
Query: 72 S-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE--- 127
C + + LL MS G PN V+YNTL+ + AE L L+ M+++
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENR-AEEALELLHMMADGQV 197
Query: 128 -DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P++ + N + F GQ+D + GI P++ T+ I++D KA ++
Sbjct: 198 RSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDR 257
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
V + M IVTY +I + G K++ + + M + ++P C T L+
Sbjct: 258 AEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GK + + + I D + ++ Y +EM L++M G P
Sbjct: 318 YLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISP 377
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ + + A++ M A D+ KM + L+
Sbjct: 378 NHYIFNIVFCAFAKKAMIGEA---MDIFNKMRQQGLS 411
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +A EL+ M+ G + ++ +L+ ++ D+A + + + + D Q
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL-CSKDLQV 657
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ T++I+I + LK + L + +S G+ P+ TY + + E +
Sbjct: 658 DIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMF 717
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C P+ +N +R G I K +T ++L+ + +
Sbjct: 718 SEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777
Query: 182 GHFEKMSAVMEYMQKYHY 199
H K +KYH+
Sbjct: 778 EHQAK-----SLPEKYHF 790
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 10/330 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ + +LF M+ G + + +LL+ R G F++ L+E M D QP
Sbjct: 280 LCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM-DIQP 338
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMS--------TQGIRPNTVTYNTLIDAYGRAKM 113
+V T+ ILI K D +L MS + + P+ V YNTLID +
Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR 398
Query: 114 FAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
E + +M S+ C PD T NC + F +G+I+ ++ +++ G+ P++ T N
Sbjct: 399 QQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVN 458
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+ + G Q+ VTY +I+AF + ++ LF M
Sbjct: 459 TLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS 518
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P + +L+ + AG+ VL + I DTV +N L+ + R F +
Sbjct: 519 GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRV 578
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L+ M++ G KPD +TY T++ S NG
Sbjct: 579 FEMLKEMEEAGLKPDTITYNTLIAYASKNG 608
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 146/357 (40%), Gaps = 44/357 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ + G + L+E M++ C PD TY+ LI KA +K + L +M
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445
Query: 90 STQGIRPNTVTYNTLIDAYGR-------AKMFAE-------------------------- 116
+ +G+ PN VT NTL+ R F E
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNF 505
Query: 117 ---MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
MEL +ML C PD + F +G++ + + GI+P +N
Sbjct: 506 EKAMEL-FNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+ + + F ++ +++ M++ +TYN +I + GDLK + + R M
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEM 292
+ P+ T +++ AY G + + + + S + +TV +N L+++ +
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
++E M+ G P+ TY + + G+++ K+ + + E MD PD+
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFK-----GLRDE-KDLEKVFEFMDRMIEHACNPDY 735
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + EK ELF M EG N + L+ R+G A + + +
Sbjct: 428 GFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRR-GMK 486
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D TY+ LI + F+K L ++M G P+ + Y TLI + +A A+
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ PD N + F + + + + ++ + AG++P T+N L+ K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS-ERIKPSCV 239
G + VM M K T+ TY VI+A+ G+ + +F+ M++ ++ P+ V
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTV 666
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ + K + S++ + + +T +N + K ++ ++ M
Sbjct: 667 IYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ C PD +T + S G K+F
Sbjct: 727 IEHACNPDYITMEILTEWLSAVGEIERLKKF 757
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 154/314 (49%), Gaps = 1/314 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ E+A +L + ++++G +T+++ ++ A + G + +A LL M T D DV
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQML-TNDIPADV 287
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YS +I +C + + + LL M TQG+ PN ++YN+ IDA + + E L +
Sbjct: 288 ISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLRE 347
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + P V + N A +G+ + ++ + GI P+ ++N LD+ K G
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQ 407
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+EK ++ M I+++N IDA GR + L R M + + P+ +T S
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ A G + + ++ + R + + + V +N ++DA + + + +L M RG
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527
Query: 304 CKPDKVTYRTMVRA 317
PD ++Y + + A
Sbjct: 528 VAPDVISYNSAIEA 541
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL + M +G NT S+ + L A + G ++KA LL M +T PD+ +++
Sbjct: 375 EALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGM-STVGSDPDIISFNSA 433
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +C + ++ LL +M T G+ PN +TYN+ I+A GR+ + E +M +
Sbjct: 434 IDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGL 493
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T N + A Q + + + G+ P + ++N +++ GK +E
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ M I++YN + A ++G ++ L + M + + P+ V+ + + A G
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACG 613
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ + +L+ + + + ++ +DA + + E +L ++++G PD
Sbjct: 614 KGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQ 673
Query: 310 TYRTMVRAY 318
TY T++ A+
Sbjct: 674 TYLTVISAF 682
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 147/313 (46%), Gaps = 7/313 (2%)
Query: 9 EKAHELFQAMV--DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVN 64
++A +L MV EG + ++ + ++A G + +A LLE M + P P++
Sbjct: 162 KEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVP---PNLI 218
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ I +C K +++ LL ++ QG P+T TYN +IDA + + E L +M
Sbjct: 219 TYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQM 278
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
L+ D DV + + + A G + E+ ++ G+ P++ ++N +D+ K +
Sbjct: 279 LTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRW 338
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ ++ M T+++YN A G + L + M ++ I P+ ++ S
Sbjct: 339 KEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSA 398
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ A G+ EK +LR + D + FN +DA GR + + +L M G
Sbjct: 399 LDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGL 458
Query: 305 KPDKVTYRTMVRA 317
P+ +TY + + A
Sbjct: 459 TPNVITYNSAIEA 471
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 151/326 (46%), Gaps = 4/326 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L + M G S+ + +A +G + +A LL+ M P+ +Y+
Sbjct: 339 KEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMP-AQGIAPNTISYNS 397
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ +C K ++K LL MST G P+ +++N+ IDA GR + + L +M +
Sbjct: 398 ALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAG 457
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+V T N + A G S + + + + G+ P++ T+N ++D+ K +E
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAV 517
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + +++YN I+A G+ + L + M + KP ++ S V A
Sbjct: 518 QLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTAC 577
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+G+ + +L+ + + +TV + + A G+ + + +L+ MQ G P+
Sbjct: 578 AKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNL 637
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLV 334
+TY + A + G KE DL+
Sbjct: 638 ITYSAAIDACAKQG---RWKEAVDLL 660
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 1/282 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q EKA +L + M G D + SF + + A GR ++ A LL M T P+V
Sbjct: 404 KGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMP-TAGLTPNV 462
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ I++C ++ + + L +M T+G+ PN VTYN++IDA + + + L
Sbjct: 463 ITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG 522
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + PDV + N + A G Q + + + + G +P I ++N + + K+G
Sbjct: 523 MPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGR 582
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + +++ M + V+Y I A G+ + + M++ P+ +T +
Sbjct: 583 WREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSA 642
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ A G+ ++ +L + + D + ++ A+ R
Sbjct: 643 AIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 7/317 (2%)
Query: 17 AMVDE----GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
A +DE G +T S+ ++A + A LL M T PDV TY+ I +
Sbjct: 96 AALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMP-TEGVTPDVVTYNSAIAA 154
Query: 73 CLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
C K + + LL+ M T+GI P+ VTYN+ I A + E L +M+++
Sbjct: 155 CSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVP 214
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + A + + E+ G PS T+N ++D+ K G + + +
Sbjct: 215 PNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDL 274
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M +++Y+ VI A GR K+ L MR++ + P+ ++ S + A
Sbjct: 275 LGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK 334
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ ++ +LR + ++ + +N A + E +L+ M +G P+ ++
Sbjct: 335 GDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTIS 394
Query: 311 YRTMVRAYSTNGMKNHA 327
Y + + A + G A
Sbjct: 395 YNSALDACAKGGQWEKA 411
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + ++A LF+ M G N ++ +++ A + ++ A LL M PD
Sbjct: 473 GRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPAR-GVAPD 531
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +Y+ I++C K ++ LL M T+G +P+ ++YN+ + A ++ + E L
Sbjct: 532 VISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLK 591
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + P+ + + A G Q D + ++ Q+ G P++ T++ +D+ K G
Sbjct: 592 DMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQG 651
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+++ ++ +++ + TY VI AF R D
Sbjct: 652 RWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRCSD 687
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 11/279 (3%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V SIL+++ K + A L + G +T +YN I A + +A L
Sbjct: 77 VKLKSILLEA--KGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLR 134
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQ----IDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M +E PDV T N + A G+ +D + + + GI P + T+N + +
Sbjct: 135 EMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTE--GITPDVVTYNSAIAAC 192
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G +++ ++E M ++TYN I A + ++ L + + PS
Sbjct: 193 SNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPST 252
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T ++ A G+ + +L + +DI D + ++ ++ A GR + + E +LE
Sbjct: 253 RTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQ 312
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M+ +G P+ ++Y + + A + + KE DL+ +M
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKG---DRWKEALDLLREM 348
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQXMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M + PD + + L + +
Sbjct: 69 RLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQ 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ ++ + M+K +++YN
Sbjct: 129 KFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNX 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + + ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K ++A L M G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIK-CS 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN ++YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ + GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F+ ++D + + K +A + V + M+
Sbjct: 323 RDTAXHILAGAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPERYTYSTLITHFGKEGLFDD-ALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD N + FG + + ++AG+ P +++ LL
Sbjct: 62 KAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ S + T NI+ID +G+ K+ + LF MR I+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ ++ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ M G +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKL 280
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 5/247 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF +M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M GI PN +TY+T+I +G+
Sbjct: 219 VVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAXHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I ++ +ID F + + +F MR P +
Sbjct: 335 RIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIA 394
Query: 243 SLVRAYG 249
++ AYG
Sbjct: 395 LVLNAYG 401
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ M + + N ++ ++ YG++ +KA +L++ M N +P+ TYS +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNX-GIEPNAITYSTI 260
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D+ L + + G+ + V Y T+I AY RA + A + ++L E
Sbjct: 261 ISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK----RLLHELK 316
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD + +G+I+ + + AG I F+ ++D + K + +
Sbjct: 317 RPDNIPRDTAXHILAGAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVE 376
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
V + M+ Y +V++A+G+ + + ++ M+ E
Sbjct: 377 VFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXVYMNMQDE 419
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M + G + N +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 230 GKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSS-GVEID 288
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y +I + +A + LL ++ RP+ + +T A E
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAXHILAGAGRIEEATWVFR 344
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + D+ + + F + + + ++K + G P N ++L++YGK
Sbjct: 345 QAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH 404
Query: 183 HFEKMSAVMEYMQ 195
F+K V MQ
Sbjct: 405 EFDKAHXVYMNMQ 417
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + ++A LFQ + G + + + ++ AY R+GL A LL +K PD
Sbjct: 263 IWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-PDNI 321
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P IL A ++ + G + ++ +ID + + K +A +
Sbjct: 322 PRDTAXHILAG----AGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEV 377
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
KM PD + L A+G + D Y Q G
Sbjct: 378 FDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXVYMNMQDEG 420
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
R + P T +L+ +G G + S L+ ++ + D V ++ L++ +L +
Sbjct: 1 RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ + +++ G PD V Y +M+ + G KE + L+ +M
Sbjct: 61 SKAISIFSRLKRSGITPDXVAYNSMINVF---GKAKLFKEARSLISEM 105
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 156/305 (51%), Gaps = 2/305 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F+ M +G +++ AL+ ++ GL +A L M+ +V Y+ ++ +
Sbjct: 317 FEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALILQLEMEKK-GVASNVIMYNTIMDAFS 375
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K+ ++ + + ++M ++G++P + ++N L++AY R +E LV+M EP+V
Sbjct: 376 KSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVK 435
Query: 135 TMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ C + A+G ++ M + + + GI+P+ +++ L+ +Y +G EK + E
Sbjct: 436 SYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFEN 495
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + +I TY ++DAF RAGD + +++LM E++ + VT +L+ + G
Sbjct: 496 MLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGH 555
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ V+ D + + +N L++AY R ++ +L+ M R KPD VTY T
Sbjct: 556 YVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARDLKPDSVTYST 615
Query: 314 MVRAY 318
M+ A+
Sbjct: 616 MIYAF 620
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 142/298 (47%), Gaps = 2/298 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M +G +N + ++ A+ +S ++A + MK + +P +++IL+ + +
Sbjct: 355 MEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMK-SKGVKPTSASFNILMNAYSRRM 413
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSEDCEPDVWTM 136
+ V+ LL +M G+ PN +Y LI AYGR K ++M ++M P +
Sbjct: 414 QPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSY 473
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ A+ SG + +E G++PSI T+ LLD++ +AG + + + M +
Sbjct: 474 TALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIR 533
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
T VT+N ++D F + G + + ++P+ +T L+ AY G+ K
Sbjct: 534 EKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLK 593
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
L +L+ + D+ D+V ++ ++ A+ R++ F + M + G PD +Y+ +
Sbjct: 594 LPQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL 651
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 161/337 (47%), Gaps = 13/337 (3%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQPDV 63
CK+ + A ++++AM + + + + +++ + G K ++ E M Q V
Sbjct: 271 CKRYDDACKVYEAMETNNVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMN-----QKGV 325
Query: 64 NTYSILIKSCLKAFAFD--KVQALLS--DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
S ++ + +K+F + K QAL+ +M +G+ N + YNT++DA+ ++ E E
Sbjct: 326 KWSSEVLGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEG 385
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M S+ +P + N + A+ Q + +EK + + G++P++ ++ L+ +YG
Sbjct: 386 VFAEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYG 445
Query: 180 KAGHFEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ M+A M+K T +Y +I A+ +G ++ F M E +KPS
Sbjct: 446 RQKKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSI 505
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +L+ A+ AG L + + + ++ V FN L+D + + + E + V+
Sbjct: 506 ETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGHYVEARDVISE 565
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ G +P +TY ++ AY+ G H K Q L E
Sbjct: 566 FDKIGLQPTVMTYNMLMNAYARGG--QHLKLPQLLQE 600
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QPE +L M D G + N +S+T L+SAYGR + D A MK +P ++
Sbjct: 414 QPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKN-GIRPTSHS 472
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + + +K + +M +G++P+ TY TL+DA+ RA + M+
Sbjct: 473 YTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMI 532
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E T N L F G +F G+QP++ T+N+L+++Y + G
Sbjct: 533 REKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHL 592
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K+ +++ M VTY+ +I AF R D K+ + + M
Sbjct: 593 KLPQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFKRAFFYHKKM 636
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 155/344 (45%), Gaps = 6/344 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ EK LF+ + + + + + +S +D A + E M+ T +
Sbjct: 232 LLGRAGMGEKIMVLFKNLPLKKEFQDVHVYNSAISGLMVCKRYDDACKVYEAME-TNNVN 290
Query: 61 PDVNTYSILIKSCLKAFAFDK-VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD T SI+I K K M+ +G++ ++ LI ++ + ++ +
Sbjct: 291 PDHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALI 350
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++M + +V N + AF S QI+ E + + +S G++P+ +FNIL+++Y
Sbjct: 351 LQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYS 410
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-LFRLMRSERIKPSC 238
+ E + ++ M+ + +Y +I A+GR + M F M+ I+P+
Sbjct: 411 RRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTS 470
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ +L+ AY +G EK S + + + L+DA+ R + + ++
Sbjct: 471 HSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKL 530
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
M + +VT+ T++ ++ +G H E +D++ + D+ L
Sbjct: 531 MIREKVLGTRVTFNTLLDGFAKHG---HYVEARDVISEFDKIGL 571
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 36/160 (22%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG--------------------------L 42
EKA+ F+ M+ EG + +++T LL A+ R+G L
Sbjct: 487 EKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTL 546
Query: 43 FDKAFSLLEHMKNTPDC---------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
D F+ H D QP V TY++L+ + + K+ LL +M+ +
Sbjct: 547 LD-GFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARD 605
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
++P++VTY+T+I A+ R + F KM+ PDV
Sbjct: 606 LKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDV 645
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F L Y +GL +K+ L+ M+ C + Y+ LI + +KA K A+ M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEG-HRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+RP+T T+N L++A+ +AK + +M +++C P+V T + + A G +
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ K + +S G +P+I T+ ++D GK+GH +K + E M T V YN +
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I GR+G LFR M S+ ++P VT SLV G AG+ + + + +
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
LD +N L+D + K E + +++ G PD T+ ++ +G + A
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 152/334 (45%), Gaps = 2/334 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K +KA +++ M G +T +F L++A+ ++ D + L E M+N +C P+V
Sbjct: 101 KAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN-QNCSPNV 159
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYSILI + K +K + DM ++G RPN TY ++ID G++ + +
Sbjct: 160 ITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEE 219
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M SE N + G SG+ D K + + S G+QP TF L+ G AG
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + + + + + YN++ID ++ L + +F + + + P T +
Sbjct: 280 ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNA 339
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ +G+ +L + + D +N L+D + E +L MQ G
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Query: 304 CKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
+PD VTY T++ G +++ + F+++ K
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK 433
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 6/258 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + + A +LF+ M+ +G + +FT+L+ G +G +A + + ++ C
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV-GCAL 297
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DVN Y++LI + K+ D+ + ++ G+ P+ T+N L+D ++ + + L
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M C PDV N + SG+++ + + QS G +P + T+N L+D K
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----IKPS 237
G E + E + ++ T VTYN +++ AG + + LF M+ E I P
Sbjct: 418 GRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPD 476
Query: 238 CVTLCSLVRAYGHAGKPE 255
VT +L+ AG E
Sbjct: 477 FVTYTTLLNGARQAGLSE 494
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 152/341 (44%), Gaps = 26/341 (7%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC EKA ++F M GC N ++T+++ G+SG DKAF L E M + V
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ LI ++ D L +M ++G++P+ VT+ +L+ G A +E +
Sbjct: 231 -VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
C DV N + S ++D + + + + G+ P + TFN L+D K+G
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ M++ + + YN +ID ++G +++ L M+S +P VT +
Sbjct: 350 IHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNT 409
Query: 244 LVRAYGHAGKPEKLGSVLRFID--NSDIMLDTVFFNCLVDAY---GRL----KCFAEMK- 293
L+ G+ E LR + ++ +TV +N +++ GR+ K F MK
Sbjct: 410 LIDESCKGGRIE---DALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466
Query: 294 ----GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GV++ PD VTY T++ G+ A
Sbjct: 467 ETVDGVID--------PDFVTYTTLLNGARQAGLSELANSL 499
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
L Y A + + L +M C N + AF +G Y +G
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
++P TFN+L++++ KA + + + E MQ + S ++TY+I+IDA + G +++
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+F M+S +P+ T S++ G +G +K + + + ++ V +N L+
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQD 332
GR + M +G +PD VT+ ++V G + A+ FQ+
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + PD + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 171/375 (45%), Gaps = 35/375 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M D GC T +F L+ YG +G+ ++ LL+ M + +P+ T++
Sbjct: 158 KEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNS 217
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG------RAK-MFAEMELT- 120
LI++ + ++ M+ G++P+ VTYNTL AY RA+ M EM+
Sbjct: 218 LIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNR 277
Query: 121 ---------------------------LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
L +M + P++ N ++ F + D ++
Sbjct: 278 VMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVD 337
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + G++P + TF+ +++++ G +K + + M K I ++I+ +
Sbjct: 338 EALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGY 397
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
RAG+ ++ E L M ++P+ V +++ + AGK E V + I +
Sbjct: 398 VRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNL 457
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
F L+ YG K + + +L++M+Q+G P K T + + A+ G+ N AK ++
Sbjct: 458 KTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKND 517
Query: 334 VEKMDETCLAMKRPD 348
VE+ + ++ K D
Sbjct: 518 VEEAPKVMISTKEDD 532
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 138/281 (49%), Gaps = 8/281 (2%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TY+ L+ + + F + +L+S + G++P++V +N +I+A+ + E
Sbjct: 103 RPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMK 162
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSY 178
KM C+P T N ++ +GN+G + K + Q ++P+ TFN L+ ++
Sbjct: 163 IFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAW 222
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ V+ M +VTYN + A+ + G+ + E + M++ R+ P+
Sbjct: 223 CNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNE 282
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
T ++ Y G K+ LRF+ N + + V FN L+ + + +
Sbjct: 283 RTCGIIINGYCKEG---KMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEA 339
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
L +M++ G KPD VT+ T++ A+S+ G+ + +E F D+V+
Sbjct: 340 LTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVK 380
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + + G +P++ T+ LL + + F+ + +++ ++K V +
Sbjct: 85 GKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFF 144
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I+AF +G++K+ +FR M+ KP+ T +L++ YG+AG PE+ +L +
Sbjct: 145 NAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQ 204
Query: 267 SD-IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + + FN L+ A+ K E V+ M G +PD VTY T+ RAY+ NG +
Sbjct: 205 EENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETS 264
Query: 326 HAK 328
A+
Sbjct: 265 RAE 267
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI+I+ G ++ + +F + E +P+ +T +L+ A + + + S++ ++
Sbjct: 79 NILIEK----GKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEK 134
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + D+VFFN +++A+ E + M+ RGCKP T+ T+++ Y GM
Sbjct: 135 NGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEE 194
Query: 327 AKEFQDLVEK 336
+ DL+ +
Sbjct: 195 CLKLLDLMSQ 204
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 166/336 (49%), Gaps = 13/336 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKS 72
LF M ++ + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+
Sbjct: 2 LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIEL 59
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + K ++ S + G P+ V YN +I+ +G+AK+F + + +M + P+
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPN 119
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 120 ASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 179
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG
Sbjct: 180 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 239
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ EK ++++ + N I +++ ++ ++ +G++ + + ++ G + D++ ++
Sbjct: 240 EHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQ 299
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TM+ AY G+ HAK +KRPD
Sbjct: 300 TMIXAYERAGLVAHAKRL----------LHELKRPD 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K A L M G N S++ALL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVENKKFLEALSVFAEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 IGKLDRAAMLFQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMY 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSNVIALVLNAY 406
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ + E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANVVEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ G+ F D++ I L +++AYG+L F + V MQ
Sbjct: 385 DKMYGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANEVYMEMQDV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 2/311 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E F+ M +G + + AL+ ++ GL +A + M+ + Y+
Sbjct: 28 KEAWEFFERMTRKGVKWSPEVLGALIKSFCDEGLKKEALIIQTEMERR-GISSNAIIYNT 86
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S K+ ++ + L S+M +G++P + T+N L+DAY R +E L++M
Sbjct: 87 LMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQDAG 146
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P+ + C + A+G ++ M + + + AGI+P+ ++ L+ +Y +G EK
Sbjct: 147 LAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGWHEKA 206
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
E MQ+ +I TY ++DAF RAGD K + +++LM E+++ + VT L+
Sbjct: 207 YITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILLDG 266
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ G + V+ + + +N L++AY R +++ +L+ M +PD
Sbjct: 267 FAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLEPD 326
Query: 308 KVTYRTMVRAY 318
+TY TM+ AY
Sbjct: 327 SITYTTMIYAY 337
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G +N + L+ +Y +S ++A L M+ +P T++IL+ + +
Sbjct: 72 MERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQ-AKGLKPTSATFNILMDAYSRRM 130
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL-TLVKMLSEDCEPDVWTM 136
D ++ LL +M G+ PN +Y LI AYGR K ++M ++M +P ++
Sbjct: 131 QPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSY 190
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ A+ SG + +E Q GI+PSI T+ LLD++ +AG + + + + M +
Sbjct: 191 TALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMR 250
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
T VT+NI++D F + G + + + + P+ +T L+ AY G+ K
Sbjct: 251 EKVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSK 310
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
L +L+ + + D++ + ++ AY R++ F ++M + G PD +Y+ +
Sbjct: 311 LPQLLKEMATLKLEPDSITYTTMIYAYVRVRDFRRAFFYHKMMVKSGKVPDAKSYQKL 368
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 3/245 (1%)
Query: 81 KVQALL--SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
K +AL+ ++M +GI N + YNTL+D+Y ++ E E +M ++ +P T N
Sbjct: 62 KKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNI 121
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA-VMEYMQKY 197
+ A+ Q D +EK + Q AG+ P+ ++ L+ +YG+ M+A M+K
Sbjct: 122 LMDAYSRRMQPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKA 181
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T +Y +I A+ +G ++ F M+ E IKPS T +L+ A+ AG + L
Sbjct: 182 GIKPTSYSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTL 241
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + + + V FN L+D + + + E + V+ ++ G P +TY ++ A
Sbjct: 242 MDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNA 301
Query: 318 YSTNG 322
Y+ G
Sbjct: 302 YARGG 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E+A L+ M +G + +F L+ AY R D LL M++ P+
Sbjct: 93 KSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQDA-GLAPNA 151
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQ--------GIRPNTVTYNTLIDAYGRAKMFA 115
+Y+ LI + + Q +SDM+ GI+P + +Y LI AY +
Sbjct: 152 KSYTCLISAYGR-------QKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGWHE 204
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ +T M E +P + T L AF +G T+ ++ ++ + TFNILL
Sbjct: 205 KAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILL 264
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D + K GH+ + V+ +K+ T++TYN++++A+ R G ++ L + M + +++
Sbjct: 265 DGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLE 324
Query: 236 PSCVTLCSLVRAY 248
P +T +++ AY
Sbjct: 325 PDSITYTTMIYAY 337
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ Y+ S VT I+I + G K+ F M + +K S L +L++++ G
Sbjct: 1 MEAYNVSPDHVTCCIMITVMRKKGCTAKEAWEFFERMTRKGVKWSPEVLGALIKSFCDEG 60
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ + ++ I + + +N L+D+Y + E +G+ MQ +G KP T+
Sbjct: 61 LKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFN 120
Query: 313 TMVRAYS 319
++ AYS
Sbjct: 121 ILMDAYS 127
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + PD + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 12/331 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M + G + S++ LL+A R+G D A + L M++ PD+ +S LI
Sbjct: 161 ASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLILFSNLI 219
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSEDC 129
L+ K AL S + GIRP+ YN + AY ++ + + + L+ M ++
Sbjct: 220 HLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGV 279
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T + L A G+ + ++ A ++P I+ FNI+L++YG+ +
Sbjct: 280 APDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREAD 339
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS---------ERIKPSCV 239
+ M++ ++VTYN ++ +G AG + +LF LMRS +KP+ V
Sbjct: 340 RLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVV 399
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ YG + + EK G +++ + + D + ++ ++ + + + E +
Sbjct: 400 TYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKL 459
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G + D V Y+TMV AY G+ + AK
Sbjct: 460 REAGTEIDPVLYQTMVVAYERAGLVSQAKRL 490
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 148/314 (47%), Gaps = 13/314 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + ++++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 270 LLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAY 329
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSE---- 127
+ + L M G+ P+ VTYNT++ YG A +F E L++ S+
Sbjct: 330 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGG 389
Query: 128 ---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P+V T N + +G S + + + ++ Q+ G+QP T++ +L + KAG
Sbjct: 390 AGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKL 449
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + E +++ V Y ++ A+ RAG + Q + L R ++ P + +
Sbjct: 450 DRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKD----PEGIPKETA 505
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++ AG+ E+ + R N+ + D+ ++D Y + + + V + M++ G
Sbjct: 506 IKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ 565
Query: 305 KPDKVTYRTMVRAY 318
PD T + AY
Sbjct: 566 LPDSEIIATAMNAY 579
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 20/349 (5%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF + G + +++ A ++AY +S L A +L H PD TYS +
Sbjct: 230 KALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPI 289
Query: 70 IKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ + + +L S M + ++P+ +N +++AYG+ + E + M
Sbjct: 290 LAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAG 349
Query: 129 CEPDVWTMNCTLRAFGNSG-------QIDTMEKCYEKFQSAG--IQPSINTFNILLDSYG 179
P V T N LR +G++G D M + AG ++P++ T+N ++ YG
Sbjct: 350 VPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYG 409
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ EK +++ MQ +TY+ ++ + +AG L + LF +R + V
Sbjct: 410 KSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPV 469
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
++V AY AG + +LR + + + + L A GRL+ E +
Sbjct: 470 LYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASA-GRLE---EAAWLFRRA 525
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G D +R M+ Y+ N + ++++E DE + PD
Sbjct: 526 VNTGEIKDSSVHRAMMDLYAKN------RRHRNVIEVFDEMRKLGQLPD 568
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 55/325 (16%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L++S +A LL +M +G+ P+ +Y+TL+ A RA + LT + ++
Sbjct: 145 YNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHL-DHALTFLPLM 203
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY------ 178
+D PD+ + + G + + ++AGI+P + +N + +Y
Sbjct: 204 EDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLL 263
Query: 179 --------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------YN 207
G A E S ++ + + V+ +N
Sbjct: 264 RDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFN 323
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID-- 265
I+++A+G+ ++ + LF MR + PS VT +++R YG AG G + D
Sbjct: 324 IILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAG---LFGEAVHLFDLM 380
Query: 266 ----------NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
S + + V +N ++ YG+ + +++ MQ G +PD +TY T++
Sbjct: 381 RSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTIL 440
Query: 316 RAYSTNG-MKNHAKEFQDLVEKMDE 339
+ G + A+ F+ L E E
Sbjct: 441 SIWVKAGKLDRAARLFEKLREAGTE 465
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 128/303 (42%), Gaps = 33/303 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +A LF +M G + ++ +L YG +GLF +A L + M++T D
Sbjct: 330 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGG 389
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++PN VTYNT+I YG++ + +
Sbjct: 390 AGS---------------------------SVKPNVVTYNTMITIYGKSLEDEKAGRLVQ 422
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + +PD T + L + +G++D + +EK + AG + + ++ +Y +AG
Sbjct: 423 EMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAG 482
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTL 241
+ ++ ++ + I AG L++ +LF R + + IK S V
Sbjct: 483 LVSQAKRLLRDLKDPEG----IPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVH- 537
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ Y + + V + + D+ ++AYG+LK F + + + M++
Sbjct: 538 RAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAMRE 597
Query: 302 RGC 304
GC
Sbjct: 598 AGC 600
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++ YN+++ + RAG+L+ L MR + P + +L+ A AG + + L
Sbjct: 142 LIPYNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLP 201
Query: 263 FIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+++ + D + F+ L+ DA L F+ ++ G +PD Y V
Sbjct: 202 LMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAA-------GIRPDLKAYNAAV 254
Query: 316 RAYSTNGMKNHAKEF 330
AY + + AK
Sbjct: 255 AAYCKSDLLRDAKRM 269
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 38/343 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------------ 55
LF M + +++ L++ +G+ GLFD A S L+ M+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 56 ----------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
PD+ Y+ +I KA F + ++L+S+M T G+ PNT
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+Y+TL+ Y K F E +M C D+ T N + +G G +K +
Sbjct: 122 SYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ +
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ AY R A K +L ++ +PD + T + + G
Sbjct: 302 IVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 340
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSNVIAVVLNAY 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 5/247 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + +I + + +F MR P +
Sbjct: 341 RIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIA 400
Query: 243 SLVRAYG 249
++ AYG
Sbjct: 401 VVLNAYG 407
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 236 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GVEID 294
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 295 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 350
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + D+ + + + + ++K + G P N ++L++YGK
Sbjct: 351 QAVDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 408
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 158/328 (48%), Gaps = 10/328 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M + GC +F L+ YG+ G +++ LL+ M QP+ T +I
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LTLVKMLSE 127
L+++ ++ ++ M + G++P+ VT+NTL AY R E + + +ML
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P+V T + + G+++ + + + + G+ P++ FN L+ + + +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+++ +VT++ +++A+ GD+K+ E ++ M I P L +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQR---- 302
Y AG+PEK +L + + + V + ++ + C A EMK ++V ++
Sbjct: 646 YARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGW----CSAGEMKKAMQVYKKMCGIV 701
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ TY T++ + A+E
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 153/334 (45%), Gaps = 7/334 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++AH +F +++EG + ++T L++A R F SL+ ++ +PD +
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTILF 392
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + ++ D+ + M G +P T+NTLI YG+ E L ML
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-- 183
++ +P+ T N ++A+ N +I+ K QS G++P + TFN L +Y + G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 184 -FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E M ++ M + T +++ + G +++ F M+ + P+
Sbjct: 513 TAEDM--IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL++ + + + +G V+ ++ + D V F+ L++A+ + + + M +
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD + + + Y+ G AK+ + + K
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAKQILNQMRK 664
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + + L+ ++ + ++ + + +G +P+ +TY TL+ A R K F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K+ +PD N + A SG +D K +EK + +G +P+ +TFN L+ YGK
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 182 GHFEKMSAVMEYM-----------------------QKYHYSWTI-------------VT 205
G E+ S +++ M +K +W I VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 206 YNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF- 263
+N + A+ R G E + M ++KP+ T ++V Y GK E+ LRF
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE---ALRFF 554
Query: 264 --IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + FN L+ + + + V+++M++ G KPD VT+ T++ A+S+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 322 G-MKNHAKEFQDLVE 335
G MK + + D++E
Sbjct: 615 GDMKRCEEIYTDMLE 629
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ M+ N ++ +++ Y G ++A MK P++ ++ LIK
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL-GVHPNLFVFNSLIKGF 576
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L D V ++ M G++P+ VT++TL++A+ E ML +PD+
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + +G+ + ++ + + G++P++ + ++ + AG +K V +
Sbjct: 637 HAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Query: 194 M-QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M S + TY +I FG A + E L + M + + P+ T+ + + G
Sbjct: 697 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ E++ M++ G D + +F+ L Y R+G +KA +L M+ +P+V Y+
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKF-GVRPNVVIYTQ 676
Query: 69 LIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A K + M G+ PN TY TLI +G AK + E L M +
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 128 DCEPDVWTMNCTLRAFGNSG 147
+ P TM + + G
Sbjct: 737 NVVPTRKTMQLIADGWKSIG 756
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 10/338 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK EKA ++ M C N ++++LL ++G D+A L M + C
Sbjct: 198 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM-TSKGCV 256
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI A D + L+ +M+ +TV+YN L+D Y R E +
Sbjct: 257 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQL 316
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA-GIQPSINTFNILLDSYG 179
+M ++ C PD T C +R F N+ +++ E ++A GI P + T++I++ Y
Sbjct: 317 FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 376
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSC 238
+A F + + ++ M + + VTY+ +ID +AG + ME L + KP
Sbjct: 377 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV-----DKPDV 431
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT ++ + E+ ++L + N + FN ++ A RL E +L
Sbjct: 432 VTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 491
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
M G +P VTY T++ +S G A E +++ +
Sbjct: 492 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRR 529
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 10/324 (3%)
Query: 2 LGKCKQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
L K + KA+E+ + M D + + +++ +++ + + G D+A +L M
Sbjct: 19 LCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMA 78
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ ++ + D+ ++ +M +G+ P+ T++ LI + A+ E
Sbjct: 79 PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 138
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS------AGIQPSINTFNIL 174
++L+ C D + + + +I + YE FQ +P + T+ L
Sbjct: 139 YKEILTSSCRLDAVSSSALITGLCRERRIG---EAYELFQEMEMREDGAWKPDVVTYTAL 195
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D + K+G+ EK ++ M+ +VTY+ ++ +AGDL Q LFR M S+
Sbjct: 196 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P+ VT +L+ A K + ++ + + DTV +N L+D Y RL E K
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAY 318
+ + M + C PD++TY +VR +
Sbjct: 316 LFKEMAAKSCLPDRITYTCLVRGF 339
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + ++A E+ + M +G + + +F+AL++ + + D+A L + + T C+
Sbjct: 90 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL-TSSCR 148
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEM 117
D + S LI + + L +M + +P+ VTY LID + ++ +
Sbjct: 149 LDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKA 208
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M C P+V T + L +G +D + + S G P++ T+ L+
Sbjct: 209 MKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 268
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
A + +M+ M V+YN ++D + R G +++ + LF+ M ++ P
Sbjct: 269 LCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPD 328
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+T LVR + +A + E+ +L + + I D V ++ +V Y R K F E +
Sbjct: 329 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 388
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ M R P+ VTY +++ G NHA E V+K D
Sbjct: 389 QEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPD 430
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E+A +LF+ M + C + ++T L+ + + ++A LLE+MK
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN----------------------- 97
PDV TYSI++ +A F + + +M + + PN
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422
Query: 98 --------TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
VTY +I+ E L +M+++ EP V T N + A G +
Sbjct: 423 LKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM----QKYHYSWTIV- 204
D K + G++P + T+ LL+ + + G E + E M +K + +V
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP 542
Query: 205 --TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++ +I +A ++ + + +RS +P+ ++V AG+ E+ G ++
Sbjct: 543 EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 602
Query: 263 FI 264
I
Sbjct: 603 SI 604
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQID-T 151
+ PN TYN +++ +A++ ++ L +M + PD+ T + + F G++D
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
E E G+ P + T+ ++D + G ++ ++ M+ T++ +I
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY---GHAGKPEKLGSVLRFIDNSD 268
+ A + + L++ + + + V+ +L+ G+ +L + ++
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
D V + L+D + + + +L VM+ R C P+ VTY +++ G + A
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 161/323 (49%), Gaps = 13/323 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTYSILIK 71
L+Q MV G + F + A+ +G +A + M+ N P +V Y+ILI
Sbjct: 161 LYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPF---NVVIYNILID 217
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK---MFAEMELTLVKMLSED 128
+ + ++ + L+++M +GI+PN TYN LI Y AK F E + +M +
Sbjct: 218 AYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASG 277
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T L A+G+ G + E+ + + ++ G+QP+ ++ L+++Y + EK +
Sbjct: 278 LYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAA 337
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E ++K + T+ TY ++DA+ RAGDL+ ++ +++ M+ E + VT +++ A+
Sbjct: 338 RAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAF 397
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ ++ ++ N D + +N L+++Y R + +L M+ G PD
Sbjct: 398 QKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDS 457
Query: 309 VTYRTMVRAY-----STNGMKNH 326
TY T++ + T +K H
Sbjct: 458 FTYCTLIYGFLRVRDQTKALKYH 480
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 39/354 (11%)
Query: 19 VDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLE--------HMKNT-----PDCQ-- 60
+ E C + +SFT L + GR + D+A F +L H+ NT +C
Sbjct: 62 LHEPCLCDPRSFTILFTFLGRMAMPDQALVFFGMLPKDKQFHSVHVYNTLITCLTNCNRY 121
Query: 61 --------------PDVNTYSILIKSCLKAF-AFDKVQALLSDMSTQGIRPNTVTYNTLI 105
PD T+S+L+ S +K + +V AL DM +GI P+ + T I
Sbjct: 122 DLELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFI 181
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
A+ A E L +M + +V N + A+G GQ++ E + + GIQ
Sbjct: 182 KAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQ 241
Query: 166 PSINTFNILLDSYGKAG---HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
P++ T+N L+ Y +A F ++E M+ +VT+ +++ A+G G +Q
Sbjct: 242 PNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQA 301
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
E +F M++ ++P+ + +L+ AY PEK I + + L+DA
Sbjct: 302 EQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDA 361
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y R ++ V + M+ GC +VTY T++ A+ G KE +DL+E+
Sbjct: 362 YRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQG---RYKEARDLIEE 412
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L + M G + +FT LL AYG GL ++A + MK QP+ +Y+ LI
Sbjct: 266 AEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMK-ARGVQPNSYSYTALI 324
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + +K + QG+ P TY L+DAY RA ++ M E C
Sbjct: 325 NAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCV 384
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
T L AF G+ E+F++ G +P + +N+LL+SY + G K S +
Sbjct: 385 ATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDI 444
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ M+ + TY +I F R D
Sbjct: 445 LLEMKTAGFLPDSFTYCTLIYGFLRVRD 472
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 204 VTYNIVID-AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VT++++++ A G LK++ L++ M I PS + ++A+ AG+ ++ +
Sbjct: 139 VTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITT 198
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ ++ + V +N L+DAYGR+ E +G++ M++RG +P+ TY ++ Y
Sbjct: 199 EMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAK 258
Query: 323 MKNHAKEFQDLVEKMDETCL 342
K + L+E+M+ + L
Sbjct: 259 PKRQFVVAEGLIEEMEASGL 278
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
PEKA F+ + +G + +++TALL AY R+G + ++ + MK C TY
Sbjct: 333 PEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMK-VEGCVATRVTYM 391
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++ + K + + + L+ + QG +P+ + YN L+++Y R + L++M +
Sbjct: 392 TILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTA 451
Query: 128 DCEPDVWTMNCTL 140
PD +T CTL
Sbjct: 452 GFLPDSFTY-CTL 463
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 166/346 (47%), Gaps = 18/346 (5%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + E A F+ + G ++ ++ L+ A+ + G+ D+A + + + + C
Sbjct: 173 MFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRS-FCL 231
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KM 113
D + +I+ KA D+ +L M G++PN + Y ++++A+ RA K+
Sbjct: 232 DDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKL 291
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM+ +C T L + +G E+ K + G + ++ ++
Sbjct: 292 FEEMQ-------ESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYST 344
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+D YGK G ++ + + M++ ++ YN ++D +G+AG + E L ++ +
Sbjct: 345 LIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSK 404
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ P VT +L+ AY G+ E+ V + LD + +++ YG+ + ++++
Sbjct: 405 LVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLA 464
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+LEVM + G +PD +T+V Y GM +A E L+ K++E
Sbjct: 465 ELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAE---LLRKINE 507
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 42/381 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + F + DEG ++ ++ A+LSA + G DK L+ M+ +PD
Sbjct: 105 GKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREA-GIKPD 163
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM--------- 113
YSILI KA + A ++ G P++V YNTLI A+ + M
Sbjct: 164 QVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFK 223
Query: 114 -------------------------FAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSG 147
A+ L ++K++ E +P+ L AF +
Sbjct: 224 EAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRAN 283
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q K +E+ Q + + +T+ +L+ Y KAG ++ M++ + +V Y+
Sbjct: 284 QPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYS 343
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ID +G+ G L++ LF M+ + K + + +++ YG AG+ ++ + +S
Sbjct: 344 TLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDS 403
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ DTV + L++AY RL F E V E + G K D++ M+ Y A
Sbjct: 404 KLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGK------A 457
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
+++ L E ++ + +PD
Sbjct: 458 RQYSKLAELLEVMPKSGIQPD 478
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+C PD+ Y+++IK + F Q S M G P+ V YN LI YG+ F++
Sbjct: 54 NCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQA 113
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++ E PD T L A G ID + ++ + AGI+P ++IL+D
Sbjct: 114 MKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDM 173
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+GKAG E +A +Q Y V YN +I AF + G + Q +F+ +
Sbjct: 174 FGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDD 233
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V ++++ Y A ++ VL+ + + + + + +++A+ R + E
Sbjct: 234 PVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFE 293
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
MQ+ C+ + TY TM+ YS G + A+E
Sbjct: 294 EMQESNCRFGESTYITMLNVYSKAGFHSAAEEL 326
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G P+ Y R + + +E+ + +M+ ++C PD+ ++ N+G+
Sbjct: 16 SQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRF 75
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV---TY 206
T + + K + G P I +NIL+ YGK G+F S M+Y + + TY
Sbjct: 76 QTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNF---SQAMKYFSQLKDEGLLPDSGTY 132
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
V+ A + G++ + + MR IKP V L+ +G AG+ E + R +
Sbjct: 133 CAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQM 192
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S + D+V +N L+ A+ ++ + V + Q+ C D V + TM++ Y+ M +
Sbjct: 193 SGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQ 252
Query: 327 AKEFQDLVEKM 337
A L++++
Sbjct: 253 ALHVLKLMKEI 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + ++A LF M +GC N + +L YG++G + A L+ +K++
Sbjct: 348 MYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDS-KLV 406
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI + + F++ + G++ + + +I+ YG+A+ ++++
Sbjct: 407 PDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAEL 466
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
L M +PD + + + + G + + K G
Sbjct: 467 LEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 3/330 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + KA + +M + G N ++ ++ Y G + A +L+ MKN +PD
Sbjct: 247 CKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR-GVEPD 305
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ +L M G+ P VTYNTLID Y +
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P V T N + A G++D + + +GI P T+NIL++ Y + G
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCG 425
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K + + M T+VTY +I + +K + LF + E P +
Sbjct: 426 NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ + G ++ ++L+ +D +I+ D V +N L+ R E + +L+ M++R
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR 545
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G +PD ++Y T++ YS G N A +D
Sbjct: 546 GIRPDHISYNTLISGYSKRGDINDAFTIRD 575
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 157/382 (41%), Gaps = 50/382 (13%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + A E F M ++G ++F A+LS + + + + L M + V T
Sbjct: 180 KRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRL-KIKSTVYT 238
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++I+I K K + + M G++PN VTYNT+I Y + L M
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ EPD +T + G+++ EK + G+ P+ T+N L+D Y G
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358
Query: 186 KMSAVMEYMQKYHYSWTI-----------------------------------VTYNIVI 210
K + M + T+ +TYNI+I
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ + R G+ K+ L M S+ I+P+ VT SL+ + + + I
Sbjct: 419 NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478
Query: 271 LDTVFFNCLVDAY---GRL-KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
D + FN L+D + G L + FA +L+ M +R PD+VTY T+++ G
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFA----LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 327 AKEFQDLVEKMDETCLAMKRPD 348
A+E L+++M + RPD
Sbjct: 535 ARE---LLKEMKRRGI---RPD 550
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + + A +LF+ ++ EG + F AL+ + +G D+AF+LL+ M + +
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM-DKRNIV 513
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ L++ + ++ + LL +M +GIRP+ ++YNTLI Y + +
Sbjct: 514 PDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+MLS P + T N ++ + Q D E+ ++ S GI P +T+ L++ GK
Sbjct: 574 RDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633
Query: 181 A 181
Sbjct: 634 V 634
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 131/309 (42%), Gaps = 40/309 (12%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ +LI++C + D M +G+ P T+N ++ + + + + +M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL--------- 175
+ V+T N + G++ + ++ G++P++ T+N ++
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 176 -----------------DSYG---------KAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
DSY K G E+ S ++E M++ T VTYN +
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 210 IDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
ID + GDL K Y ++R I P+ T L+ A GK ++ +++ + +S
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVR-RAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I+ D++ +N L++ Y R + + + M +G +P VTY +++ S +N K
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK---RNRMK 463
Query: 329 EFQDLVEKM 337
DL EK+
Sbjct: 464 AADDLFEKI 472
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 3/291 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C + + KA MV ++ L+ A G D+A +++ M ++
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIV 408
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ILI + K L +M ++GI+P VTY +LI + +
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K++ E PD+ N + +G +D ++ I P T+N L+ +
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M++ ++YN +I + + GD+ + M S P+ +T
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+L++ + + +L+ + + I D + L++ G++ +E
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +A +L + M + G + + +LSAY + KA S E MK T + +PD
Sbjct: 216 GSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGT-NIRPD 274
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I K ++K + M + P+ VT+ ++I Y
Sbjct: 275 TTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAV 334
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E +P++ + N + A+ + G + +++G++P + ++ LL+SYG+
Sbjct: 335 FSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGR 394
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ +K V E M++ IV+YN +IDA+G G L + + R M + I P+ V+
Sbjct: 395 SQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVS 454
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G + + VL+ + I L+T+ +N + +Y + F + + M+
Sbjct: 455 ICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMR 514
Query: 301 QRGCKPDKVTYRTMV 315
+ PD VT+ ++
Sbjct: 515 KSKVIPDAVTFTVLI 529
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 13/316 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNTY 66
++A LF M C + ++ AL++A+GRSG + A +++E M K P P +TY
Sbjct: 152 DQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIP---PSRSTY 208
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +C + + + L M+ G+ P+ VT+N ++ AY +A+ M
Sbjct: 209 NNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKG 268
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-----AGIQPSINTFNILLDSYGKA 181
+ PD T+N + GQ EK F+S A P + TF ++ Y
Sbjct: 269 TNIRPDTTTLNIIIYCLTKLGQ---YEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVN 325
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E AV M IV+YN ++ A+ G K+ +F +++ ++P V+
Sbjct: 326 GQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSY 385
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ +YG + +P+K V + + + V +N ++DAYG AE VL M+Q
Sbjct: 386 TSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQ 445
Query: 302 RGCKPDKVTYRTMVRA 317
G P+ V+ T++ A
Sbjct: 446 DGIYPNAVSICTLLAA 461
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 158/362 (43%), Gaps = 33/362 (9%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
Q KA F+ M +T + ++ + G ++KA + + M+ +C PDV T
Sbjct: 255 QYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVT 314
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ +I + +A+ S M +G++PN V+YNTL+ AY M E +
Sbjct: 315 FTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIK 374
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PDV + L ++G S Q + +E + ++P+I ++N ++D+YG G
Sbjct: 375 NSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLA 434
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ V+ M++ V+ ++ A GR ++ + + IK + + S +
Sbjct: 435 EAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAI 494
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV------------------------- 280
+Y + G+ EK S+ R + S ++ D V F L+
Sbjct: 495 GSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIP 554
Query: 281 ---DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+AY K E + + M+ GC PD VTY M+ AY+ H K+ L+++M
Sbjct: 555 MTKEAYSSGK-ITEAESMFNKMKMAGCSPDVVTYTMMLHAYNA---AEHWKKACALLQEM 610
Query: 338 DE 339
+E
Sbjct: 611 EE 612
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 37/339 (10%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + + MKN + + Y+++I+ + D+ + L
Sbjct: 100 KNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFF 159
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ T N LI+A+GR+ + + ML + P T N + A G+SG
Sbjct: 160 EMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSG 219
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
K +K G+ P + T NI+L +Y + K + E M+ + T N
Sbjct: 220 NWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLN 279
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSER---------------------------------- 233
I+I + G ++ +F+ MR +R
Sbjct: 280 IIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMV 339
Query: 234 ---IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+KP+ V+ +L+ AY G ++ SV I NS + D V + L+++YGR +
Sbjct: 340 AEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPK 399
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ + V E+M++ KP+ V+Y M+ AY +NG+ A E
Sbjct: 400 KAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVE 438
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +QP+KA E+F+ M + N S+ A++ AYG +GL +A +L M+ P+
Sbjct: 393 GRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQD-GIYPN 451
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ L+ +C + + +L + I+ NT+ YN+ I +Y F +
Sbjct: 452 AVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYR 511
Query: 123 KMLSEDCEPDVWTMN------CTLRAFG---------------------NSGQIDTMEKC 155
M PD T C + + +SG+I E
Sbjct: 512 SMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESM 571
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ K + AG P + T+ ++L +Y A H++K A+++ M++Y+ + + ++ AF +
Sbjct: 572 FNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNK 631
Query: 216 AGDLKQMEYLFRLMRSERIKPS------CVTLCSLVRAY 248
GD ++ L MR + I S V+ CSL+R +
Sbjct: 632 GGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDW 670
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 145/357 (40%), Gaps = 65/357 (18%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F MV EG N S+ L+ AY G+ +A S+ +KN+ +PDV +Y
Sbjct: 327 QIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNS-GLRPDVVSY 385
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ S ++ K + + M ++PN V+YN +IDAYG + AE L +M
Sbjct: 386 TSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQ 445
Query: 127 EDCEPDVWTMNCTLRA------------------------------------FGNSGQID 150
+ P+ ++ CTL A + N G+ +
Sbjct: 446 DGIYPNAVSI-CTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFE 504
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF----EKMSAVMEY---MQKYHYSWT- 202
Y + + + P TF +L+ K + E +S +M+ M K YS
Sbjct: 505 KATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGK 564
Query: 203 -------------------IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+VTY +++ A+ A K+ L + M I+P + +
Sbjct: 565 ITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSA 624
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+RA+ G P K+ + F+ +I L F +V A L+ + ++++M+
Sbjct: 625 LMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLME 681
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +F M GC + ++T +L AY + + KA +LL+ M+ + QPD S L
Sbjct: 567 EAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEY-NIQPDTIACSAL 625
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML-SED 128
+++ K KV L M + I + + ++ A + + + L+K++ S
Sbjct: 626 MRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDW-RTTIELIKLMESSF 684
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ +N L G SG+I++M K + K +G + + NT++ILL + G++ K
Sbjct: 685 SVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRKYI 744
Query: 189 AVMEYMQK 196
V+E+M++
Sbjct: 745 EVLEWMEE 752
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 158/328 (48%), Gaps = 10/328 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M + GC +F L+ YG+ G +++ LL+ M QP+ T +I
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LTLVKMLSE 127
L+++ ++ ++ M + G++P+ VT+NTL AY R E + + +ML
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P+V T + + G+++ + + + + G+ P++ FN L+ + + +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+++ +VT++ +++A+ GD+K+ E ++ M I P L +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQR---- 302
Y AG+PEK +L + + + V + ++ + C A EMK ++V ++
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW----CSAGEMKKAMQVYKKMCGIV 701
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ TY T++ + A+E
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 153/334 (45%), Gaps = 7/334 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++AH +F +++EG + ++T L++A R F SL+ ++ +PD +
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTILF 392
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + ++ D+ + M G +P T+NTLI YG+ E L ML
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-- 183
++ +P+ T N ++A+ N +I+ K QS G++P + TFN L +Y + G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 184 -FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E M ++ M + T +++ + G +++ F M+ + P+
Sbjct: 513 TAEDM--IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL++ + + + +G V+ ++ + D V F+ L++A+ + + + M +
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD + + + Y+ G A++ + + K
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + + L+ ++ + ++ + + +G +P+ +TY TL+ A R K F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K+ +PD N + A SG +D K +EK + +G +P+ +TFN L+ YGK
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 182 GHFEKMSAVMEYM-----------------------QKYHYSWTI-------------VT 205
G E+ S +++ M +K +W I VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 206 YNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF- 263
+N + A+ R G E + M ++KP+ T ++V Y GK E+ LRF
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE---ALRFF 554
Query: 264 --IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + FN L+ + + + V+++M++ G KPD VT+ T++ A+S+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 322 G-MKNHAKEFQDLVE 335
G MK + + D++E
Sbjct: 615 GDMKRCEEIYTDMLE 629
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ M+ N ++ +++ Y G ++A MK P++ ++ LIK
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL-GVHPNLFVFNSLIKGF 576
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L D V ++ M G++P+ VT++TL++A+ E ML +PD+
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + +G+ + E+ + + G++P++ + ++ + AG +K V +
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Query: 194 M-QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M S + TY +I FG A + E L + M + + P+ T+ + + G
Sbjct: 697 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ E++ M++ G D + +F+ L Y R+G +KA +L M+ +P+V Y+
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF-GVRPNVVIYTQ 676
Query: 69 LIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A K + M G+ PN TY TLI +G AK + E L M +
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 128 DCEPDVWTMNCTLRAFGNSG 147
+ P TM + + G
Sbjct: 737 NVVPTRKTMQLIADGWKSIG 756
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 158/328 (48%), Gaps = 10/328 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ M + GC +F L+ YG+ G +++ LL+ M QP+ T +I
Sbjct: 429 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 488
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LTLVKMLSE 127
L+++ ++ ++ M + G++P+ VT+NTL AY R E + + +ML
Sbjct: 489 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 548
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P+V T + + G+++ + + + + G+ P++ FN L+ + + +
Sbjct: 549 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 608
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V++ M+++ +VT++ +++A+ GD+K+ E ++ M I P L +
Sbjct: 609 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 668
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQR---- 302
Y AG+PEK +L + + + V + ++ + C A EMK ++V ++
Sbjct: 669 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW----CSAGEMKKAMQVYKKMCGIV 724
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ TY T++ + A+E
Sbjct: 725 GLSPNLTTYETLIWGFGEAKQPWKAEEL 752
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 153/334 (45%), Gaps = 7/334 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++AH +F +++EG + ++T L++A R F SL+ ++ +PD +
Sbjct: 357 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTILF 415
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + ++ D+ + M G +P T+NTLI YG+ E L ML
Sbjct: 416 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 475
Query: 127 ED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-- 183
++ +P+ T N ++A+ N +I+ K QS G++P + TFN L +Y + G
Sbjct: 476 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 535
Query: 184 -FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E M ++ M + T +++ + G +++ F M+ + P+
Sbjct: 536 TAEDM--IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 593
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SL++ + + + +G V+ ++ + D V F+ L++A+ + + + M +
Sbjct: 594 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 653
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G PD + + + Y+ G A++ + + K
Sbjct: 654 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 687
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + + L+ ++ + ++ + + +G +P+ +TY TL+ A R K F + +
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K+ +PD N + A SG +D K +EK + +G +P+ +TFN L+ YGK
Sbjct: 401 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 460
Query: 182 GHFEKMSAVMEYM-----------------------QKYHYSWTI-------------VT 205
G E+ S +++ M +K +W I VT
Sbjct: 461 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 520
Query: 206 YNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF- 263
+N + A+ R G E + M ++KP+ T ++V Y GK E+ LRF
Sbjct: 521 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE---ALRFF 577
Query: 264 --IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + FN L+ + + + V+++M++ G KPD VT+ T++ A+S+
Sbjct: 578 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 637
Query: 322 G-MKNHAKEFQDLVE 335
G MK + + D++E
Sbjct: 638 GDMKRCEEIYTDMLE 652
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ M+ N ++ +++ Y G ++A MK P++ ++ LIK
Sbjct: 541 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL-GVHPNLFVFNSLIKGF 599
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L D V ++ M G++P+ VT++TL++A+ E ML +PD+
Sbjct: 600 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 659
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + +G+ + E+ + + G++P++ + ++ + AG +K V +
Sbjct: 660 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 719
Query: 194 M-QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M S + TY +I FG A + E L + M + + P+ T+ + + G
Sbjct: 720 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 779
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ E++ M++ G D + +F+ L Y R+G +KA +L M+ +P+V Y+
Sbjct: 641 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF-GVRPNVVIYTQ 699
Query: 69 LIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A K + M G+ PN TY TLI +G AK + E L M +
Sbjct: 700 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 759
Query: 128 DCEPDVWTMNCTLRAFGNSG 147
+ P TM + + G
Sbjct: 760 NVVPTRKTMQLIADGWKSIG 779
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 162/330 (49%), Gaps = 13/330 (3%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFA 78
D + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCD 59
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ + +
Sbjct: 60 YSKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYST 119
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++++ + N I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 299
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G+ HAK +KRPD
Sbjct: 300 ERAGLVAHAKRL----------LHELKRPD 319
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CF 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 134/309 (43%), Gaps = 54/309 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G++ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL------MRSERIKP 236
++ +++ + +I I AG +++ ++FR ++ +
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 237 SCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ L S + YG+ + +K+ + F D++ I L +++AYG+L F + V
Sbjct: 360 RMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL-------VLNAYGKLHEFDKANDV 412
Query: 296 LEVMQQRGC 304
MQ+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 12/331 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M + G + S++ LL+A R+G D A + L M++ PD+ +S LI
Sbjct: 139 ASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLILFSNLI 197
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LTLVKMLSEDC 129
L+ K AL S + GIRP+ YN + AY ++ + + + L L M ++
Sbjct: 198 HLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRLLLHDMPADGV 257
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T + L A G+ + ++ A ++P ++ FNI+L++YG+ +
Sbjct: 258 APDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAYGQLDLAREAD 317
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS---------ERIKPSCV 239
+ M++ ++VTYN ++ +G AG + +LF LMRS +KP+ V
Sbjct: 318 RLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVV 377
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ YG + + EK G +++ + + D + ++ ++ + + + E +
Sbjct: 378 TYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKL 437
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G + D V Y+TMV AY G+ + AK
Sbjct: 438 REAGTEIDPVLYQTMVVAYERAGLVSQAKRL 468
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 13/314 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + ++++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 248 LLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAY 307
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSE---- 127
+ + L M G+ P+ VTYNT++ YG A +F E L++ S+
Sbjct: 308 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGG 367
Query: 128 ---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P+V T N + +G S + + K + Q+ G+QP T++ +L + KAG
Sbjct: 368 AGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKL 427
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + E +++ V Y ++ A+ RAG + Q + L R ++ P + +
Sbjct: 428 DRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKD----PEGIPKETA 483
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++ AG+ E+ + R N+ + D+ ++D Y + + + V + M++ G
Sbjct: 484 IKILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ 543
Query: 305 KPDKVTYRTMVRAY 318
PD T T + AY
Sbjct: 544 LPDSETIATAMNAY 557
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 20/349 (5%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF + G + +++ A ++AY +S L A LL H PD TYS +
Sbjct: 208 KALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRLLLHDMPADGVAPDAETYSPI 267
Query: 70 IKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ + + +L S M + ++P+ +N +++AYG+ + E + M
Sbjct: 268 LAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAYGQLDLAREADRLFWSMRRAG 327
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA---------GIQPSINTFNILLDSYG 179
P V T N LR +G++G ++ +SA ++P++ T+N ++ YG
Sbjct: 328 VPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNTMIAIYG 387
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ EK +++ MQ +TY+ ++ + +AG L + LF +R + V
Sbjct: 388 KSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPV 447
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
++V AY AG + +LR + + + + L A GRL+ E +
Sbjct: 448 LYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASA-GRLE---EAAWLFRRA 503
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G D +R M+ Y+ N + ++++E DE + PD
Sbjct: 504 ANTGEIKDSSVHRAMMDLYAKN------RRHRNVIEVFDEMRKLGQLPD 546
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 55/325 (16%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L++S +A LL +M +G+ P+ +Y+TL+ A RA + LT + ++
Sbjct: 123 YNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHL-DHALTFLPLM 181
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY------ 178
+D PD+ + + G + + ++AGI+P + +N + +Y
Sbjct: 182 EDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLI 241
Query: 179 --------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------YN 207
G A E S ++ + + V+ +N
Sbjct: 242 RDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFN 301
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID-- 265
I+++A+G+ ++ + LF MR + PS VT +++R YG AG G + D
Sbjct: 302 IILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAG---LFGEAVHLFDLM 358
Query: 266 ----------NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
S + + V +N ++ YG+ + +++ MQ G +PD +TY T++
Sbjct: 359 RSASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTIL 418
Query: 316 RAYSTNG-MKNHAKEFQDLVEKMDE 339
+ G + AK F+ L E E
Sbjct: 419 SIWVKAGKLDRAAKLFEKLREAGTE 443
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD---- 58
G+ +A LF +M G + ++ +L YG +GLF +A L + M++ D
Sbjct: 308 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGG 367
Query: 59 ----CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
+P+V TY+ +I K+ +K L+ DM G++P+ +TY+T++
Sbjct: 368 AGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTIL--------- 418
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+W +G++D K +EK + AG + + +
Sbjct: 419 -----------------SIWV---------KAGKLDRAAKLFEKLREAGTEIDPVLYQTM 452
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSER 233
+ +Y +AG + ++ ++ + I AG L++ +LF R +
Sbjct: 453 VVAYERAGLVSQAKRLLRDLKDPEG----IPKETAIKILASAGRLEEAAWLFRRAANTGE 508
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
IK S V +++ Y + + V + + D+ ++AYG+LK F +
Sbjct: 509 IKDSSVH-RAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSETIATAMNAYGKLKDFDKAA 567
Query: 294 GVLEVMQQRGC 304
+ + M++ GC
Sbjct: 568 ALYQAMREEGC 578
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 6/241 (2%)
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+ YN L+ + RA L++M PD ++ + L A +G +D
Sbjct: 121 IPYNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPL 180
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ + P + F+ L+ + G K A+ ++ + YN + A+ ++
Sbjct: 181 MEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDL 240
Query: 219 LKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGK---PEKLGSVLRFIDNSDIMLDTV 274
++ + L M ++ + P T ++ A G+ L S +R + + + D
Sbjct: 241 IRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAV--ARVKPDLS 298
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
FN +++AYG+L E + M++ G P VTY TM+R Y G+ A DL+
Sbjct: 299 VFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLM 358
Query: 335 E 335
Sbjct: 359 R 359
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 157/324 (48%), Gaps = 12/324 (3%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M + G + S++ LL+A R+G D A + L M++ PD+ +S LI L+
Sbjct: 1 MRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLILFSNLIHLALRGG 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSEDCEPDVWTM 136
K AL S + GIRP+ YN + AY ++ + + + L+ M ++ PD T
Sbjct: 60 DAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETY 119
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
+ L A G+ + ++ A ++P I+ FNI+L++YG+ + + M+
Sbjct: 120 SPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMR 179
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS---------ERIKPSCVTLCSLVR 246
+ ++VTYN ++ +G AG + +LF LMRS +KP+ VT +++
Sbjct: 180 RAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMIT 239
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG + + EK G +++ + + D + ++ ++ + + + E +++ G +
Sbjct: 240 IYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEI 299
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
D V Y+TMV AY G+ + AK
Sbjct: 300 DPVLYQTMVVAYERAGLASQAKRL 323
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 147/314 (46%), Gaps = 13/314 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + ++++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 103 LLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAY 162
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSE---- 127
+ + L M G+ P+ VTYNT++ YG A +F E L++ S+
Sbjct: 163 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGG 222
Query: 128 ---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P+V T N + +G S + + + ++ Q+ G+QP T++ +L + KAG
Sbjct: 223 AGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKL 282
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + E +++ V Y ++ A+ RAG Q + L R ++ P + +
Sbjct: 283 DRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKD----PEGIPKETA 338
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++ AG+ E+ + R N+ + D+ ++D Y + + + V + M++ G
Sbjct: 339 IKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ 398
Query: 305 KPDKVTYRTMVRAY 318
PD T + AY
Sbjct: 399 LPDSEIIATAMNAY 412
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 20/349 (5%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF + G + +++ A ++AY +S L A +L H PD TYS +
Sbjct: 63 KALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPI 122
Query: 70 IKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ + + +L S M + ++P+ +N +++AYG+ + E + M
Sbjct: 123 LAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAG 182
Query: 129 CEPDVWTMNCTLRAFGNSG-------QIDTMEKCYEKFQSAG--IQPSINTFNILLDSYG 179
P V T N LR +G++G D M + AG ++P++ T+N ++ YG
Sbjct: 183 VPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYG 242
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ EK +++ MQ +TY+ ++ + +AG L + LF +R + V
Sbjct: 243 KSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPV 302
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
++V AY AG + +LR + + + + L A GRL+ E +
Sbjct: 303 LYQTMVVAYERAGLASQAKRLLRDLKDPEGIPKETAIKILASA-GRLE---EAAWLFRRA 358
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G D +R M+ Y+ N + ++++E DE + PD
Sbjct: 359 VNTGEIKDSSVHRAMMDLYAKN------RRHRNVIEVFDEMRKLGQLPD 401
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 128/303 (42%), Gaps = 33/303 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +A LF +M G + ++ +L YG +GLF +A L + M++T D
Sbjct: 163 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGG 222
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++PN VTYNT+I YG++ + +
Sbjct: 223 AGS---------------------------SVKPNVVTYNTMITIYGKSLEDEKAGRLVQ 255
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + +PD T + L + +G++D + +EK + AG + + ++ +Y +AG
Sbjct: 256 EMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAG 315
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTL 241
+ ++ ++ + I AG L++ +LF R + + IK S V
Sbjct: 316 LASQAKRLLRDLKDPEG----IPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVH- 370
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ Y + + V + + D+ ++AYG+LK F + + + M++
Sbjct: 371 RAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAMRE 430
Query: 302 RGC 304
GC
Sbjct: 431 AGC 433
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 39/249 (15%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFGNSG 147
M +G+ P+ +Y+TL+ A RA + LT + ++ +D PD+ + + G
Sbjct: 1 MRERGVTPDAFSYSTLLAALTRAGHL-DHALTFLPLMEDDAVAPDLILFSNLIHLALRGG 59
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY-MQKYHYSWTIVTY 206
+ + ++AGI+P + +N + +Y K+ ++ + M + TY
Sbjct: 60 DAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETY 119
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRS-ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ ++ A R G LF MR+ R+KP
Sbjct: 120 SPILAALARRGRHLAAVSLFSHMRAVARVKP----------------------------- 150
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
D FN +++AYG+L E + M++ G P VTY TM+R Y G+
Sbjct: 151 ------DISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFG 204
Query: 326 HAKEFQDLV 334
A DL+
Sbjct: 205 EAVHLFDLM 213
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 38/343 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------------ 55
LF M + +++ L++ +G+ GLFD A S L+ M+
Sbjct: 2 LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 56 ----------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
PD+ Y+ +I KA F + ++L+S+M T G+ PNT
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+Y+TL+ Y K F E +M C D+ T N + +G G +K +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ +
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ AY R A K +L ++ +PD + T + + G
Sbjct: 302 IVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 340
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K + + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSDVIAIVLNAY 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKXSNVVEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 385 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ + F L+ Y R+G +A LLE MK T PD+ TY+ L+ K + L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMK-TEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ ++S + PN +TY TLIDAY +++ + +M + PDV T C +
Sbjct: 75 MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+++ + + + + G+ P+ ++ L+DS K G+ + + M + +V
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++D +AG E +F+++ E + P+CVT +L+ + G K +L+ ++
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I + + ++ +VD Y + E V+ M QR P+ Y T++ Y
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 147/325 (45%), Gaps = 16/325 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A ++FQ +++E N +++AL+ + + G +K LL+ M+ P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK-HIFP 260
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V YS ++ K ++ ++ M + I PN Y TLID Y +A + L L
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG-IALDL 319
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K M S E + + ++ + SG+++ ++ ++ S G+ P + ++D + K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M + + +V YN++I+ + G + E MR + P T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSAT 438
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+++ AY G LG+ L+ ++ + + +++ N LV RL E++ ++
Sbjct: 439 FNTMINAYCKEG---NLGNALKLLNEMKSYGLKPNSITCNILVQ---RLCAAGEIEKTMD 492
Query: 298 VMQQ---RGCKPDKVTYRTMVRAYS 319
++ G P T++ ++ A S
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASS 517
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 37/349 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M + + ++T +++ +SG ++A S+ M+ P+ +Y+
Sbjct: 104 EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV-GVVPNRFSYAT 162
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K + L M +GI + V Y L+D +A M E +L E
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + G ++ E ++ + I P++ ++ ++D Y K G +
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282
Query: 189 AVMEYMQKYHYSWTIVTY-------------------------------NIVIDAF---- 213
VM M + + + Y N VID+F
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G +++ + LF+ M S + P V S++ + AGK ++ + + D
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V +N L++ +L + E + M+Q G PD T+ TM+ AY G
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 71/329 (21%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G ++ +F +++AY + G A LL MK+ +P+ T +IL++ A +K
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY-GLKPNSITCNILVQRLCAAGEIEK 489
Query: 82 VQALLSDMSTQGIRPNTVT-----------------------------------YNTLID 106
LL+DM G P T YNTLI
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+ R M L M+ + D+ T N + + S + + + + G+ P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
++ T+NILL A ++ + ++ M++ TY+I++ G+ G++K+ L+
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M ++ P T +N L+ + +
Sbjct: 670 CEMITKGFVPKTRT-----------------------------------YNVLISCFAKG 694
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
K ++ K +++ MQ RG P+ TY ++
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 146/362 (40%), Gaps = 33/362 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--- 58
L + + E+A ELF+ M+ G + ++T+++ + ++G AF++ + M
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401
Query: 59 ------------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
PD T++ +I + K LL++
Sbjct: 402 VVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + G++PN++T N L+ A + L ML P T L A S +
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
D + +++ G++ ++T+N L+ ++ + G + + V + M I+TYN
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I + + LK+ + M +E + P+ T L+ A ++ ++ +
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
++ + ++ LV +G++ E + M +G P TY ++ ++ + AK
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAK 701
Query: 329 EF 330
E
Sbjct: 702 EL 703
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
IR + +N LID Y R + L M +E PD+ T N + F G + T +
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + ++P++ T+ L+D+Y K+ E + + M +VTY +++
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSL---------------------VRAYG--- 249
++G +++ + +FR M + P+ + +L VR G
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 250 -----------HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
AG + + + ++ + V ++ L+D + +L + + +L+
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M+++ P+ + Y ++V Y+ G+ N A D++ KM
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEA---MDVMRKM 288
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
M + +Q I+ S+ FN+L+D Y + G + ++E M+ + IVTYN +++
Sbjct: 1 MTRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN 60
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SD 268
F + GDL + L + ++P+ +T +L+ AY K + L L D
Sbjct: 61 GFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAY---CKSQCLEDALYMYDEMTVKS 117
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
++ D V + C+++ + E K V M++ G P++ +Y T++ + G N A+
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG--NVAE 175
Query: 329 EF 330
F
Sbjct: 176 AF 177
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 153/338 (45%), Gaps = 7/338 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA+ LF M+D G N + +++ + DKA ++L+ M + P+ TY+ L
Sbjct: 270 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-HIMPNCTTYNSL 328
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I L + + + +L +MS G RPN VTY+ LID ++ + AE M+
Sbjct: 329 IHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQ 388
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P+ T L + G + M + G++P + FNI + +Y K G ++ S
Sbjct: 389 KPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASL 448
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
MQ+ + IV Y VID + G L F M + + P +T +L+ +
Sbjct: 449 TFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFA 508
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK EK + + + I + FN ++D + E + + ++M + G KP+ V
Sbjct: 509 LHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVV 568
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+Y TM+ Y G E ++++ +D+ L +P
Sbjct: 569 SYNTMIHGYFIAG------EVGEVMKLLDDMLLIGLKP 600
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 1/334 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + Q M+DE N ++ +L+ Y SG + +A +L+ M +P
Sbjct: 297 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ-RP 355
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS+LI K+ + + + + M G +PN TY +L+ Y +M
Sbjct: 356 NVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVK 415
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ P N + A+ G++D + K Q G P I + ++D K
Sbjct: 416 DLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKI 475
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M S I+T+N +I F G ++ E LF M I P+ T
Sbjct: 476 GRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTF 535
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ GK + + + + + V +N ++ Y E+ +L+ M
Sbjct: 536 NSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 595
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
G KP VT+ T++ + G+K + L++
Sbjct: 596 IGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLID 629
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 1/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQPDVNTYSILIKS 72
+ + M + GC + S+T LL ++A L+ M D C P+V +Y+ +I
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K K L M GI PN VT N++ID + + + E L +M+ E P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ + ++ G +P++ T+++L+D K+G + +
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + TY ++ + G+L M + LM ++P + AY G
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++ + M D V + ++D ++ + M G PD +T+
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501
Query: 313 TMVRAYSTNGMKNHAKEF 330
T++ ++ +G A+E
Sbjct: 502 TLIHGFALHGKWEKAEEL 519
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 17/350 (4%)
Query: 2 LGKCKQ-----PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-------AFSL 49
+G+C + PE A +LF ++ + + LL+ R+ + A S+
Sbjct: 69 IGECYRSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSM 128
Query: 50 LEHMK--NTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
M PD+ T+ ILI C A + A L + G+R VT+ L+
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT 188
Query: 108 YGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--I 164
K ++ M + L +M C PDV++ L+ + + + G
Sbjct: 189 LCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNC 248
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P++ ++ ++ + K G K + M + +VT N VID + + + E
Sbjct: 249 PPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEA 308
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ + M E I P+C T SL+ Y +G+ + +L+ + + V ++ L+D
Sbjct: 309 VLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC 368
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ AE + + M Q G KP+ TY +++ Y+T G +DL+
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 17/245 (6%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
MV G F + AY + G D+A M+ PD+ Y+ +I K
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQ-GFMPDIVAYTTVIDGLCKIG 476
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
D + M G+ P+ +T+NTLI + + + E +M+ P+V T N
Sbjct: 477 RLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFN 536
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ G++ K ++ AG +P++ ++N ++ Y AG ++ +++ M
Sbjct: 537 SMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 596
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T VT+N ++D M S +KP VT +L+ + G+ E +
Sbjct: 597 GLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDI 640
Query: 258 GSVLR 262
++ R
Sbjct: 641 LTLFR 645
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 153/338 (45%), Gaps = 7/338 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D+G N +++ LL+AY R+G + ++ +L MK + D YS L+
Sbjct: 140 ADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR-GIRLDTAGYSTLV 198
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + K L+ +M G+ + YN LID +G+ A+ KM +E +
Sbjct: 199 RLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVK 258
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R G + + Q G+ P F ++ G+ G ++++ +
Sbjct: 259 PDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKL 318
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ + Y +++D +G+ G + +++E ++ S C L AY
Sbjct: 319 FHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQ 378
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +VL+ ++ I + V N L++A+G E VL+ ++ G PD VT
Sbjct: 379 QGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVT 438
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Y T+++A+ AK+F+ + E E A PD
Sbjct: 439 YTTLMKAFM------RAKKFEKVSEVYKEMEGAGCTPD 470
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 133/344 (38%), Gaps = 36/344 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M G + ++ L+ A R+G +A +LL M+ +PD Y+ L++
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRL-GLRPDAAHYNALLEGL 131
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L LL M+ G+ N TY L++AY RA + L +M D
Sbjct: 132 LSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ +R + ++G + Q G++ + +N L+D++GK G V +
Sbjct: 192 AGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDK 251
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M I T+N +I R G+ K+ F M+ E + P +++ G GK
Sbjct: 252 MCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGK 311
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-------KCFAEMKG------------ 294
+++ + + N + + LVD YG+ C A +K
Sbjct: 312 WDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCV 371
Query: 295 ----------------VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
VL++M+ G +P+ V ++ A+ T G
Sbjct: 372 LANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 10/302 (3%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
+ LL M+ +P Y+ LI++ +A + +ALL +M G+RP+ YN L+
Sbjct: 70 SLRLLADMQ-AAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALL 128
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+ + L++M + + T L A+ +G+++ + + GI+
Sbjct: 129 EGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIR 188
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
++ L+ Y G ++K + ++ MQ+ + YN +ID FG+ G L +
Sbjct: 189 LDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKV 248
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF---IDNSDIMLDTVFFNCLVDA 282
F M +E +KP T SL+R + G ++ LRF + + D F ++
Sbjct: 249 FDKMCAEGVKPDITTWNSLIRWHCRVGNTKR---ALRFFAAMQEEGMYPDPKIFVTIISR 305
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G + E+K + M+ RG K Y +V Y G H ++ D V + L
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYG---HFRDAHDCVAALKAENL 362
Query: 343 AM 344
+
Sbjct: 363 QL 364
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A F AM +EG + + F ++S G G +D+ L M+N +
Sbjct: 273 RVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNR-GLKESG 331
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y++L+ + F ++ + + ++ + + L +AY + + + L
Sbjct: 332 AVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQL 391
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M +E EP++ +N + AFG +G+ + + +G+ P + T+ L+ ++ +A
Sbjct: 392 MEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKK 451
Query: 184 FEKMSAVMEYMQ 195
FEK+S V + M+
Sbjct: 452 FEKVSEVYKEME 463
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ +LF M + G + + L+ YG+ G F A + +K + Q
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALK-AENLQL 364
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +L + + ++ +L M +GI PN V N LI+A+G A E L
Sbjct: 365 SPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVL 424
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS------INTFNILL 175
+ PDV T ++AF + + + + + Y++ + AG P +N +I+L
Sbjct: 425 QHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREMLNDASIVL 484
Query: 176 DSYG 179
+ G
Sbjct: 485 EQRG 488
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN++I+ +G+AK+F E + +M + PD + L +
Sbjct: 69 RLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 152/341 (44%), Gaps = 7/341 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S+T LL+ + + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F L+ + + K + + V + M+
Sbjct: 323 RDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYXNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+R PD ++ AY + K +E DE C
Sbjct: 383 ERRYFPDSNVIALVLNAYGK--LHEFEKANSVYMEMQDEGC 421
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P ++ LL
Sbjct: 62 KAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 8/333 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK +P++A ELF+ M C + ++ LL R+G ++A +L + M + + D
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182
Query: 59 ----CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
C P+V TYS+LI KA + LL M +G P+ +TY L+D +
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
A L +ML C P++ T N L + ++ G P++ T+ L
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D K G + A++ M + ++ YN++I+ +A + + L R S I
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP VT S++ + + ++ +L ++ + D + ++ L+D + E
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ EVM GC D VTY T++ G + A
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 143/322 (44%), Gaps = 9/322 (2%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C + ++ ALL + R G D+A + M+ + + P+V SILI KA
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMR-SKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
M GI +TV Y L+ + K + L +M CEP+V T N +
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM--QKYH-- 198
+ + D ++ +E +S PS+ T+N LLD + G E+ A+ + M ++ H
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183
Query: 199 ---YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
S ++TY+++ID +A + Q L M++ P +T LV K
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
VLR + ++ + + V +N L+ R + ++ ++ M RGC P+ VTY T++
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303
Query: 316 RAYSTNG-MKNHAKEFQDLVEK 336
G +K+ D+++K
Sbjct: 304 DGLCKVGRVKDACAMLADMIDK 325
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 1/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A EL ++M GC + ++T L+ + A+ +L M + C P
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA-GCVP 259
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ +A AL+ DM+ +G PN VTY TLID + + L
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + PD+ N + + Q+D + S GI+P + T++ ++ ++
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ Y++ ++ Y+ +ID +AG + + L+ +M + VT
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ AG+ ++ +L + T+ +N L+ L E ++E M++
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499
Query: 302 RGCKPDKVTYRTMVRA 317
C P VTY ++
Sbjct: 500 SNCAPSAVTYNILIHG 515
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 8/321 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ A F+AM G A+T +TALLS + D+A ++L M++ C+P
Sbjct: 54 LCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH-GCEP 112
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMF 114
+V TY+ LI K D+ Q L M + P+ VTYNTL+D R +F
Sbjct: 113 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 172
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
EM + + C P+V T + + + ++ + E ++ G P + T+ IL
Sbjct: 173 QEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL 232
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D K V+ M +VTYN ++ RA + L R M
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P+ VT +L+ G+ + ++L + + D + +N L++ + E
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352
Query: 295 VLEVMQQRGCKPDKVTYRTMV 315
+L G KPD VTY +++
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVI 373
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 8/333 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ ++A + M D GC+ N ++ +L+ ++ D+A L EHMK+ +C P
Sbjct: 89 LWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV-ECSP 147
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-------IRPNTVTYNTLIDAYGRAKMF 114
+ TY+ L+ + ++ AL +M + PN +TY+ LID +A
Sbjct: 148 SMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRV 207
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
++ L M + C PDV T + ++ + + AG P++ T+N L
Sbjct: 208 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 267
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L +A A+M M + +VTY +ID + G +K + M +
Sbjct: 268 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 327
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P + L+ A + ++ ++LR + I D V ++ ++ R E
Sbjct: 328 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 387
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+L ++ RGC PD + Y T++ G + A
Sbjct: 388 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 149/341 (43%), Gaps = 9/341 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A E+ + M+D GC N ++ +LL R+ A +L+ M C
Sbjct: 235 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCT 293
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY LI K A+L+DM +G P+ + YN LI+ +A E
Sbjct: 294 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 353
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + +S +PDV T + + S ++D + +S G P + ++ L+D K
Sbjct: 354 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + E M +VTY+ +ID +AG + + L M PS +T
Sbjct: 414 AGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMT 473
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL++ ++ ++ ++ S+ V +N L+ R++ +LE +
Sbjct: 474 YNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAK 533
Query: 301 QR-----GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
R G D + Y +++ G A + FQ++++
Sbjct: 534 ARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMID 574
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 6/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ A L + M GC N ++ L+ + G A ++L M + P
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG-TP 329
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y++LI KA D+ ALL + GI+P+ VTY+++I R+ E L
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ + S C PDV + + +G++D YE G + T++ L+D KA
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ ++ M + + +TYN +I L + L M PS VT
Sbjct: 450 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 509
Query: 242 CSLVRAYGHAGKPEKLGSVL-----RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L+ + + +L R + LDT+ ++ L+D + AE
Sbjct: 510 NILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYF 569
Query: 297 EVMQQRGCKPDKVTYRTMVRA 317
+ M G PD +TY ++
Sbjct: 570 QEMIDNGVIPDHITYSILLEG 590
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSXKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLH----------ELKRPD 319
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHIL----AGAG 334
Query: 183 HFEKMSAV 190
E+ + V
Sbjct: 335 RIEEATWV 342
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ M + + N ++ +++ YG++ +KA +L++ M+N +P+ TYS +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR-GIEPNSITYSTI 260
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D+ L + + G+ + V Y T+I AY RA + A + ++L E
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK----RLLHELK 316
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
PD + + +G+I+ + + AG
Sbjct: 317 RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAG 350
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 35/369 (9%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-- 58
G CK + KA + + + D G + ++ L+S Y ++G A LL+ M +PD
Sbjct: 154 GLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVV 213
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
C PDV TY+ILI++ K + LL +M
Sbjct: 214 TYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM 273
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G +P+ VTYN LI+ + E L M S C+P+V T N LR+ ++G+
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRW 333
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
EK + G PS+ TFNIL++ + G + V+E M ++ + ++YN +
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393
Query: 210 IDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ A + +++ +EYL +M S P VT +L+ A GK + +L + +
Sbjct: 394 LHALCKDKKMERAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ +N ++D ++ + +L+ M+ +G KPD +TY T+V S G + A
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 329 EFQDLVEKM 337
F +E+M
Sbjct: 513 AFFHDLEEM 521
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 149/363 (41%), Gaps = 39/363 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A E+ + C + ++T L+ A + +A LL+ M++ C+PD
Sbjct: 226 GKLKE---AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPD 281
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY++LI K D+ L+ M + G +PN +T+N ++ + + + E L
Sbjct: 282 VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLA 341
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSG----QIDTMEK--------------------CYEK 158
+M+ + C P V T N + G ID +EK C +K
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401
Query: 159 -----------FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
S G P I T+N LL + K G + ++ + S ++TYN
Sbjct: 402 KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYN 461
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
VID + G L M+ + +KP +T +LV GK ++ + ++
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + +N ++ + + L M RGCKP + +Y ++ + G+ A
Sbjct: 522 GVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEA 581
Query: 328 KEF 330
E
Sbjct: 582 LEL 584
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 4/296 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G ++ F LE M D PD+ + LI+ K K ++ + G P+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDI-PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+TYN LI Y + L +M PDV T N LR +SG++ + ++
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
P + T+ IL+++ K + +++ M+ +VTYN++I+ + G
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L + M S +P+ +T ++R+ G+ L + V FN
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L++ R VLE M Q GC P+ ++Y ++ A + A E+ D++
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ +R +G+ + E + +G P + T+N+L+ Y K G ++ +
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTG---EIGSA 199
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + + S +VTYN ++ +G LK+ ME L R M+ E P +T L+ A
Sbjct: 200 LQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE-CYPDVITYTILIEA-- 256
Query: 250 HAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
K +G ++ +D + D V +N L++ + E L M GC+P
Sbjct: 257 -TCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ +T+ ++R+ + G A++F L E + + C
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKF--LAEMIRKGC 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N LR +G+++ K E G P I L+ K G K + VME ++
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
++TYN++I + + G++ +L+ + P VT +++R +GK ++
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLKE 230
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
VL + D + + L++A + + +L+ M+ +GCKPD VTY ++
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290
Query: 317 AYSTNGMKNHAKEF 330
G + A F
Sbjct: 291 GICKEGRLDEAIRF 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 37/237 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ E+A E MV GC + ++ LL+A + G D A +L + + C P
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL-GSKGCSP 455
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ +I K D LL +M +G++P+ +TY+TL+ R
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR----------- 504
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
G++D + + G++P+ T+N ++ KA
Sbjct: 505 ------------------------EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPS 237
+ + YM T +Y I+I+ G K+ +E L L +K S
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 597
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 2/312 (0%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P+ + ++F++++ N +F L+ + G A S L M+ PDV TY+
Sbjct: 191 PQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGF-GLSPDVVTYN 249
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+K+ + + + LL+ M +GI P TYNTL+ AY R + + M +
Sbjct: 250 TLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAF 309
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSYGKAGHFEK 186
EPD+WT N +G++D K ++ + I P + T+N L+D+ K
Sbjct: 310 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSD 369
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++E M+ ++VT+NIV+ R G L++ ++M E + P +T +L+
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AY A K ++ + S + +DT N L+ + K + E + +L QRG P
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVP 489
Query: 307 DKVTYRTMVRAY 318
D+V+Y T++ AY
Sbjct: 490 DEVSYGTVMAAY 501
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 163/416 (39%), Gaps = 90/416 (21%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG KQ A + +AM G + + ++ L + ++G D+AF L + M++ P
Sbjct: 293 LGWIKQ---ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR-------------------------- 95
DV TY+ L+ +C K LL +M +G++
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409
Query: 96 ---------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
P+ +TYNTLIDAY +A+ A+ + + +M+ + D +T+N L
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469
Query: 147 GQIDTMEK-----------------------------------CYEKFQSAGIQPSINTF 171
+ + E+ +++ + PSI T+
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N L+ G + + + K TYNI+I A+ + GDL++ M
Sbjct: 530 NTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLE 589
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR------ 285
KP VT +L+ GK EK + +D + +N L+ A +
Sbjct: 590 NYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDT 649
Query: 286 -LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
L FA+ M+ RG +PD TY ++ A S G ++E Q+++ K+DE+
Sbjct: 650 ALHFFAD-------MEARGLQPDAFTYNVVLSALSEAG---RSEEAQNMLHKLDES 695
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 75/209 (35%), Gaps = 37/209 (17%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEK--CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + N L A S + + + P+ TFN+L+ ++ G
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + MQ + S +VTYN ++ A R G L + L M+ E I P+ T
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRAT-------- 282
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+N LV AY RL + V+E M G +PD
Sbjct: 283 ---------------------------YNTLVSAYARLGWIKQATNVVEAMTAFGFEPDL 315
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY + G + A + +D +E +
Sbjct: 316 WTYNVLAAGLCQAGKVDEAFKLKDEMEHL 344
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 36/365 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML Q EK HEL+ M +EG C +T +++AL+SA+ + G D A LL MK+
Sbjct: 199 MLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQ 258
Query: 57 PD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
P C+PDV TY+ LI+ KA FD+
Sbjct: 259 PTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNF 318
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA-FG 144
+M +G RP+TV N +I+ G+A + +M + C P V T N ++A F
Sbjct: 319 FHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFE 378
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ +I + +E+ + +GI PS T++IL+D + K EK ++E M + +
Sbjct: 379 SKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPA 438
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y +IDA G+A LF+ ++ S +++ G AG+ + ++ +
Sbjct: 439 AYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEM 498
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ + +N L+ R E + MQ+ GC PD +Y ++ + G
Sbjct: 499 NKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGP 558
Query: 325 NHAKE 329
+ A E
Sbjct: 559 HRAME 563
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 15/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K KA +F + C Q++ +++ G ++K L M N C
Sbjct: 164 MLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCF 223
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P Y LI + +G +
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGL 283
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM + C PDV+T +R G +G+ D + + + G +P N
Sbjct: 284 FEEMR-------HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINN 336
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + E M ++VTYN +I A F + ++ F M+
Sbjct: 337 MINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGS 396
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I PS T L+ + + EK +L +D + L+DA G+ K +
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + +++ Y M++ G + A D + K+
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKL 501
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L E M T C P
Sbjct: 306 LGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM-GTLQCIP 364
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY+ +IK+ ++ + ++ + M GI P+ TY+ LID + + E +
Sbjct: 365 SVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNR-TEKAMM 423
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + D + +++ + S + +++ G
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLG 483
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + + M K + + YN ++ RAG L + R M+ P
Sbjct: 484 KAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDIN 543
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P + +L + S I D V +N ++ A F E +++ M
Sbjct: 544 SYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEM 603
Query: 300 QQRGCKPDKVTYRTMVRA 317
G + D +TY +++ A
Sbjct: 604 NVLGFEYDLITYSSILEA 621
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ A G++ +D A L + +K +C
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE--NCGSSS 471
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK KA D L +M+ G PN YN L+ RA M E T+
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PD+ + N L +G + + + I+P ++N +L + AG
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
FE+ + +M+ M + + ++TY+ +++A G+
Sbjct: 592 LFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKV 625
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 6/279 (2%)
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNT-VTYNTLIDAYGRAKMFAEMEL 119
D +TY LI+ CL+ + ++ ++ +M + T + + +I G AKM ++
Sbjct: 118 DTSTYMALIR-CLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVA 176
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSY 178
++ C+P N + + GQ + + + Y + + G P T++ L+ ++
Sbjct: 177 IFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAF 236
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + ++ M+ T Y ++I F + ++ LF MR + +P
Sbjct: 237 CKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDV 296
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+R G AG+ ++ + + DTV N +++ G+ + + E
Sbjct: 297 FTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEE 356
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M C P VTY T+++A + K+ E E+M
Sbjct: 357 MGTLQCIPSVVTYNTIIKALFES--KSRISEISSWFERM 393
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK QP A F M + G + N FT+LL A+ R+G F +A S+ + M T +
Sbjct: 118 GKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTE 177
Query: 63 VNTYSILIKSCLKAFAFDKVQALLS--DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY + I + KA F+ + + D S + +P+ YN ++ YG+A F+E +
Sbjct: 178 V-TYQVYINALCKAERFNDAERIFKCLDESAEA-KPDARLYNLMLHTYGKAGKFSEQQAL 235
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M V T N +L AF + + E C Q+A I+P + T+ L+++Y K
Sbjct: 236 FRQMKGAGVPMTVVTFN-SLMAFQKT--VADAEACLRHMQAAKIKPDVITYTGLINAYSK 292
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A E+ V M + + YN ++DA+ + +++ E LF+ M +R +P +
Sbjct: 293 ARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRS 352
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AY + G +K +L+ + + + + V + L+ Y + M E +Q
Sbjct: 353 YTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQ 412
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ G KP+ + +VR +
Sbjct: 413 KAGIKPNSTIFTLLVRTF 430
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + LF+ M G +F +L+ A+ ++ A + L HM+ +PD
Sbjct: 224 GKAGKFSEQQALFRQMKGAGVPMTVVTFNSLM-AFQKT--VADAEACLRHMQ-AAKIKPD 279
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI + KA ++ + +M G+RP+ + YNTL+DAY + K E
Sbjct: 280 VITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFK 339
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C PD+ + L A+ N+G + E+ ++ + AG++P++ T+ L+ Y
Sbjct: 340 SMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVH 399
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
M E +QK + +++ FG+ D + F+ M
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM 446
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY---- 156
+N +I AYG+ EL+ +M EP+V L A +G E Y
Sbjct: 110 FNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEML 169
Query: 157 ---------------------EKF-----------QSAGIQPSINTFNILLDSYGKAGHF 184
E+F +SA +P +N++L +YGKAG F
Sbjct: 170 KTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKF 229
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ A+ M+ T+VT+N ++ AF + + E R M++ +IKP +T L
Sbjct: 230 SEQQALFRQMKGAGVPMTVVTFNSLM-AFQKT--VADAEACLRHMQAAKIKPDVITYTGL 286
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AY A + E+ V R + S + + +N L+DAY + K + + + M Q C
Sbjct: 287 INAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRC 346
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+PD +Y T++ AY+ G + K+ + L+++M + L
Sbjct: 347 RPDIRSYTTLLAAYANTG---NMKKAERLLKRMKQAGL 381
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 183 HFEKMSAVMEYM----QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K + V+E + Q+ +++ I +N++I A+G+ G E F MR ++P+
Sbjct: 83 QLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNV 142
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
SL+ A+ G + S+ + + + V + ++A + + F + + + +
Sbjct: 143 ACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFKC 202
Query: 299 MQQRG-CKPDKVTYRTMVRAYSTNG 322
+ + KPD Y M+ Y G
Sbjct: 203 LDESAEAKPDARLYNLMLHTYGKAG 227
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 158/314 (50%), Gaps = 3/314 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKA 76
M + + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K
Sbjct: 3 MRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKL 60
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
+ K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ +
Sbjct: 61 CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 120
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 121 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
++++ + N I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300
Query: 317 AYSTNGMKNHAKEF 330
AY G+ HAK
Sbjct: 301 AYERAGLVAHAKRL 314
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 91 VFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIK-CL 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 150 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 210 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++S P +
Sbjct: 270 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 326 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMR 385
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 386 GLGYFPDSNVIALVLNAY 403
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED------------------- 128
+M + + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 129 CE-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
C+ PD+ N + FG + + ++AG+ P+ ++
Sbjct: 61 CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 120
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 121 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I+P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ +
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 283
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 163 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 221
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 222 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 281
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 282 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 337
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 338 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANVVEVF 381
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L + V MQ+
Sbjct: 382 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHELDKANDVYMEMQEV 422
Query: 303 GC 304
GC
Sbjct: 423 GC 424
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 9/341 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ ++L MV +GC NT ++ L+ +YGR+ ++A ++ M+ C+P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKP 432
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + K Y Q+AG +P T++I+++ G
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ E+ AV MQ+ ++ Y +++D +G+AG++++ ++ M ++P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 242 CSLVRAYGHAGKP----EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ + K E L ++L + T+ +C D +L +M +
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL----DMGFCGQ 668
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+M G + ++NHA F DL+ D
Sbjct: 669 LMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSED 709
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F + LL +M G +PNTVTYN
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M C+PD T + +G +D Y++ Q+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VTYNI++D +A + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ +V + + + D + LVD
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M G +P+ T +++ +
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P+ T N + ++G + ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q AG +P T+ L+D + KAG + + + MQ S TY+++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A + + R + N+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V ++ +++ G E + V MQQ+ PD+ Y +V + G
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ + F L+ Y R+G +A LLE MK T PD+ TY+ L+ K + L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMK-TEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ ++S + PN +TY TLIDAY +++ + +M + PDV T C +
Sbjct: 75 MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+++ + + + + G+ P+ ++ L+DS K G+ + + M + +V
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++D +AG E +F+++ E + P+CVT +L+ + G K +L+ ++
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I + + ++ +VD Y + E V+ M QR P+ Y T++ Y
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 147/325 (45%), Gaps = 16/325 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A ++FQ +++E N +++AL+ + + G +K LL+ M+ P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK-HIFP 260
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V YS ++ K ++ ++ M + I PN Y TLID Y +A + L L
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG-IALDL 319
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K M S E + + ++ + SG+++ ++ ++ S G+ P + ++D + K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M + + +V YN++I+ + G + E MR + P T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSAT 438
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+++ AY G LG+ L+ ++ + + +++ N LV RL E++ ++
Sbjct: 439 FNTMINAYCKEG---NLGNALKLLNEMKSYGLKPNSITCNILVQ---RLCAAGEIEKTMD 492
Query: 298 VMQQ---RGCKPDKVTYRTMVRAYS 319
++ G P T++ ++ A S
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASS 517
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 37/349 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M + + ++T +++ +SG ++A S+ M+ P+ +Y+
Sbjct: 104 EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV-GVVPNRFSYAT 162
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K + L M +GI + V Y L+D +A M E +L E
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + G ++ E ++ + I P++ ++ ++D Y K G +
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282
Query: 189 AVMEYMQKYHYSWTIVTY-------------------------------NIVIDAF---- 213
VM M + + + Y N VID+F
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G +++ + LF+ M S + P V S++ + AGK ++ + + D
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V +N L++ +L + E + M+Q G PD T+ TM+ AY G
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 71/329 (21%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G ++ +F +++AY + G A LL MK+ +P+ T +IL++ A +K
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY-GLKPNSITCNILVQRLCAAGEIEK 489
Query: 82 VQALLSDMSTQGIRPNTVT-----------------------------------YNTLID 106
LL+DM G P T YNTLI
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+ R M L M+ + D+ T N + + S + + + + G+ P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
++ T+NILL A ++ + ++ M++ TY+I++ G+ G++K+ L+
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M ++ P T +N L+ + +
Sbjct: 670 CEMITKGFVPKTRT-----------------------------------YNVLISCFAKG 694
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
K ++ K +++ MQ RG P+ TY ++
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
IR + +N LID Y R + L M +E PD+ T N + F G + T +
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + ++P++ T+ L+D+Y K+ E + + M +VTY +++
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSL---------------------VRAYG--- 249
++G +++ + +FR M + P+ + +L VR G
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 250 -----------HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
AG + + + ++ + V ++ L+D + +L + + +L+
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M+++ P+ + Y ++V Y+ G+ N A D++ KM
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEA---MDVMRKM 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
M + +Q I+ S+ FN+L+D Y + G + ++E M+ + IVTYN +++
Sbjct: 1 MTRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN 60
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SD 268
F + GDL + L + ++P+ +T +L+ AY K + L L D
Sbjct: 61 GFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAY---CKSQCLEDALYMYDEMTVKS 117
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
++ D V + C+++ + E K V M++ G P++ +Y T++ + G N A+
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG--NVAE 175
Query: 329 EF 330
F
Sbjct: 176 AF 177
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 141/324 (43%), Gaps = 36/324 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSA------------------------- 36
LGKC +A E+F M+ G N +F+AL A
Sbjct: 407 LGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRASYPNEL 466
Query: 37 -----------YGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
GR+G D A LL M+ + QPD+ TY ++ C K A+
Sbjct: 467 NVVVYNAVLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAV 526
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L M +G+RPN Y +LIDA RA + + E ++ +E E D++ N L AF
Sbjct: 527 LDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFAR 586
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ ++ + +E+ +SAG++ TFN L+ + +A F+K E M+K + S T
Sbjct: 587 AKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISADATT 646
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +IDA ++G + LF MR ++P+ T +L+ A + VL +
Sbjct: 647 YNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMH 706
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCF 289
+ DT N L+ A R + F
Sbjct: 707 GFGVYPDTFTLNILLTACARNEDF 730
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 137/305 (44%), Gaps = 4/305 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+T+ +LSA +SG A SL ++ + DV +YSILI K A + +
Sbjct: 360 STRQLNKILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEM 419
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML--SEDCEPDVWTMNCTLRAF 143
M G+ PN T++ L A F + + L +M+ S E +V N L+
Sbjct: 420 FHKMIRNGVAPNAFTFSALFGALTDGAFF-DQAMRLFQMIRASYPNELNVVVYNAVLKYV 478
Query: 144 GNSGQIDT-MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G +G+ID ++ + Q+ +QP I T+ +LD K AV++ M+K
Sbjct: 479 GRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPN 538
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
Y +IDA RAG Q E LFR +R+E ++ +L+ A+ A E+
Sbjct: 539 NFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFE 598
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ ++ + D + FN L+ A R + F + E M++ D TY ++ A S +G
Sbjct: 599 EMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSG 658
Query: 323 MKNHA 327
M A
Sbjct: 659 MTELA 663
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K E+A + F+ M G + +F L++A R+ FDKA+ E MK + +
Sbjct: 584 FARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKS-NISA 642
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ LI +C K+ + AL ++M ++P T+N LI A + + L
Sbjct: 643 DATTYNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVL 702
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ M PD +T+N L A + D +F++ + + LD G +
Sbjct: 703 MLMHGFGVYPDTFTLNILLTACARNEDFDYAISLVREFET--------NYRVRLDRLGSS 754
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M PD + + L + +
Sbjct: 69 RLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENH 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + + ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K ++A L M G +T S++ +L+ Y + F +A S+ M+ +C
Sbjct: 88 VFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREI-NCL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++D + + + + + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYRKYTNVGEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G PD ++ AY + A E +E DE C+
Sbjct: 383 GLGYFPDSNVIALVLNAYGKLHEFDKANEV--YMEMQDEGCV 422
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE--- 130
+ + P+ TY+TLI +G+ +F +ME L+++ + C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 131 --------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD+ N + FG + + + AG+ P +++ +L
Sbjct: 63 AISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILT 122
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y + F + +V M++ + + T NI+ID +G+ K+ + LF MR I+P
Sbjct: 123 MYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEP 182
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 243 QEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 280
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ + F L+ Y R+G +A LLE MK T PD+ TY+ L+ K + L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMK-TEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ ++S + PN +TY TLIDAY +++ + +M + PDV T C +
Sbjct: 75 MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+++ + + + + G+ P+ ++ L+DS K G+ + + M + +V
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++D +AG E +F+++ E + P+CVT +L+ + G K +L+ ++
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I + + ++ +VD Y + E V+ M QR P+ Y T++ Y
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 147/325 (45%), Gaps = 16/325 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A ++FQ +++E N +++AL+ + + G +K LL+ M+ P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE-KHIFP 260
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V YS ++ K ++ ++ M + I PN Y TLID Y +A + L L
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG-IALDL 319
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K M S E + + ++ + SG+++ ++ ++ S G+ P + ++D + K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M + + +V YN++I+ + G + E MR + P T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSAT 438
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+++ AY G LG+ L+ ++ + + +++ N LV RL E++ ++
Sbjct: 439 FNTMINAYCKEG---NLGNALKLLNEMKSYGLKPNSITCNILVQ---RLCAAGEIEKTMD 492
Query: 298 VMQQ---RGCKPDKVTYRTMVRAYS 319
++ G P T++ ++ A S
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASS 517
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 37/349 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M + + ++T +++ +SG ++A S+ M+ P+ +Y+
Sbjct: 104 EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV-GVVPNRFSYAT 162
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K + L M +GI + V Y L+D +A M E +L E
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + G ++ E ++ + I P++ ++ ++D Y K G +
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282
Query: 189 AVMEYMQKYHYSWTIVTY-------------------------------NIVIDAF---- 213
VM M + + + Y N VID+F
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G +++ + LF+ M S + P V S++ + AGK ++ + + D
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V +N L++ +L + E + M+Q G PD T+ TM+ AY G
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 71/329 (21%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G ++ +F +++AY + G A LL MK + +P+ T +IL++ A +K
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMK-SYGLKPNSITCNILVQRLCAAGEIEK 489
Query: 82 VQALLSDMSTQGIRPNTVT-----------------------------------YNTLID 106
LL+DM G P T YNTLI
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+ R M L M+ + D+ T N + + S + + + + G+ P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
++ T+NILL A ++ + ++ M++ TY+I++ G+ G++K+ L+
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M ++ P T +N L+ + +
Sbjct: 670 CEMITKGFVPKTRT-----------------------------------YNVLISCFAKG 694
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
K ++ K +++ MQ RG P+ TY ++
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
IR + +N LID Y R + L M +E PD+ T N + F G + T +
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + ++P++ T+ L+D+Y K+ E + + M +VTY +++
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSL---------------------VRAYG--- 249
++G +++ + +FR M + P+ + +L VR G
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 250 -----------HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
AG + + + ++ + V ++ L+D + +L + + +L+
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M+++ P+ + Y ++V Y+ G+ N A D++ KM
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEA---MDVMRKM 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
M + +Q I+ S+ FN+L+D Y + G + ++E M+ + IVTYN +++
Sbjct: 1 MTRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN 60
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SD 268
F + GDL + L + ++P+ +T +L+ AY K + L L D
Sbjct: 61 GFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAY---CKSQCLEDALYMYDEMTVKS 117
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
++ D V + C+++ + E K V M++ G P++ +Y T++ + G N A+
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG--NVAE 175
Query: 329 EF 330
F
Sbjct: 176 AF 177
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKN--------------------------------- 55
+++ L++ +G+ GLFD A S L+ M+
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 56 -TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
+ PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+TL+ Y K F
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E +M C D+ T N + +G G +K + + GI+P++ ++N L
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L YG A F + + MQ+ + +VTYN +I +G+ + ++ L + M+S I
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 240
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ +T +++ +G GK ++ + + + +S + +D + F ++ AY R A K
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 300
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L ++ +PD + T + + G
Sbjct: 301 LLHELK----RPDNIPRDTAIHILAGAG 324
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 78 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 136
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 137 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 196
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 197 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 256
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 257 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 312
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 313 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 372
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 373 GLGYFPDSNVIAVVLNAY 390
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 150 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 208
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 209 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 268
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 269 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 324
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 325 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 368
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 369 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 409
Query: 303 GC 304
GC
Sbjct: 410 GC 411
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 9/341 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ ++L MV +GC NT ++ L+ +YGR+ ++A ++ M+ C+P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKP 432
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + K Y Q+AG +P T++I+++ G
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ E+ AV MQ+ ++ Y +++D +G+AG++++ ++ M ++P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 242 CSLVRAYGHAGKP----EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ + K E L ++L + T+ +C D +L +M +
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL----DMGFCGQ 668
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+M G + ++NHA F DL+ D
Sbjct: 669 LMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSED 709
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F + LL +M G +PNTVTYN
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M C+PD T + +G +D Y++ Q+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VTYNI++D +A + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ +V + + + D + LVD
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M G +P+ T +++ +
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P+ T N + ++G + ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q AG +P T+ L+D + KAG + + + MQ S TY+++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A + + R + N+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V ++ +++ G E + V MQQ+ PD+ Y +V + G
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L++ M+ +GC+ N ++ L+ +G ++A + + M+ + C P+V TYSIL
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS-GCLPNVTTYSIL 390
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K+ + M + G RPN VTY ++D + MF + + KM E C
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N ++ +G+++ K E+ Q G P+I T+N LLD+ + +E+
Sbjct: 451 TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + ++ + +VTYN V+ F RAG + + LF P +T +++ AY
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC 570
Query: 250 HAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + ++ + + + D + + L+ E L+ +G P+
Sbjct: 571 KQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNF 630
Query: 309 VTYRTMVRAY 318
T+ +VR +
Sbjct: 631 ATWNALVRCF 640
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 133/331 (40%), Gaps = 36/331 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M GCDAN +FT L+ G +A L + M C+P+V Y+
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNT 354
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ + M G PN TY+ LID + ++ T +M+S
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T C + + D EK G P+ TFN + G E
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E MQ + I TYN ++DA R ++ LF+ + + ++P+ VT +++ +
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG +G L+ +F LV RG PD
Sbjct: 535 SRAGM---MGEALQ-----------LFGKALV---------------------RGTAPDS 559
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+TY TM+ AY G A + + V M E
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 43/365 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AH+LF M ++GC + ++T ++S+ ++G D A L K P
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK------P 242
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA-------------- 107
V Y+ LI K + LL +M G+ PN V+Y+ +I++
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 108 ----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ R K++ ++L + M+ + CEP+V N + +
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQDGCEPNVVAYNTLIHGLCS 361
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G ++ + ++ Q +G P++ T++IL+D + K+G S M + +VT
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++D + Q L M E P+ +T + ++ G+ E +L +
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + +N L+DA R+ + E G+ + ++ R +P+ VTY T++ +S GM
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 326 HAKEF 330
A +
Sbjct: 542 EALQL 546
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 6/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + + + Q M +G + F +++ Y R G ++A + + C+P
Sbjct: 84 LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF-GCKP 142
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y+ L+ + L F + L ++M G+ PN TYN L+ A +
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V+M ++ C PD T + + +G+ID + +F +PS+ +N L+D K
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKE 257
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E ++ M +V+Y+ +I++ +G+++ LF M + T
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L++ GK + + + + + V +N L+ E V + MQ+
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
GC P+ TY ++ ++ +G
Sbjct: 378 SGCLPNVTTYSILIDGFAKSG 398
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + G ++D ++ ++ + GI + F +++ Y + G E+ + +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ T+ YN ++DA + + L+ M+ + + P+ T
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------- 182
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+I+L + N VDA +L F EM +GC PD VTY TM
Sbjct: 183 -------------NILLKALCKNDRVDAAHKL--FVEM-------SNKGCPPDAVTYTTM 220
Query: 315 VRAYSTNGMKNHAKEF 330
V + G + A+E
Sbjct: 221 VSSLCKAGKIDDAREL 236
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 4/278 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T++ILI+ + +K L + M + G P+ VTYNTLI +A
Sbjct: 196 PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDL 255
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ++ S DC PDV T + F G+++ +E+ +GI+P++ TFN+L+D +G
Sbjct: 256 LKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFG 315
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G+ A+ E M Y +VT+ +ID + R GD++ ++ +M++ + P+
Sbjct: 316 KIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIY 375
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++ A + + +LR + SD+ +N ++D + + E ++ M
Sbjct: 376 TYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEM 435
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++ C+PDKVT+ ++ + MK E D+ +KM
Sbjct: 436 EEKRCRPDKVTFTILIIGHC---MKGRMVEALDIFKKM 470
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 37/327 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + EK ELF AM GC + ++ L+S ++ D+A LL+ +++ DC
Sbjct: 207 GLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCS 266
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ +I K + L +M GI P VT+N LID +G+ E
Sbjct: 267 PDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAM 326
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
KM S C PDV T + + +G I K ++ ++ + P+I T+++++++ K
Sbjct: 327 HEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCK 386
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ ++ ++ YN VID F +AG++ + + M +R +P VT
Sbjct: 387 DNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVT 446
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GH K GR+ E + + M
Sbjct: 447 FTILI--IGHCMK------------------------------GRM---VEALDIFKKML 471
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
GC PD +T ++V G + A
Sbjct: 472 AIGCAPDNITISSLVACLLKAGKPSEA 498
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 5/311 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++ L+ + + GL D ++ +M++ D L+ S +A FD + L+
Sbjct: 94 STYELLIRSLCQMGLHDLVEMVIGYMRSDGHLI-DSRVLGFLVTSFAQAGKFDLAKKLII 152
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
++ + R ++ YN L++ + E + L+ P+ WT N +R G
Sbjct: 153 EVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVG 212
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTY 206
+++ + + QS G P + T+N L+ KA ++ +++ +Q + S ++TY
Sbjct: 213 EVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTY 272
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I F + G L+ LF M I+P+ VT L+ +G G ++ + +
Sbjct: 273 TSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMAS 332
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ D V F L+D Y R V +VM+ R P+ TY ++ A + N
Sbjct: 333 YSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKD---NR 389
Query: 327 AKEFQDLVEKM 337
E +DL+ ++
Sbjct: 390 IHEARDLLRQL 400
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 36/361 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A F + G T ++ ++L +G++G++ +A ++L+ M++ +C+PD TY+
Sbjct: 325 DEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDN-NCEPDAITYNE 383
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEM-ELT 120
L+ + ++A D+ A++ M+++G+ PN +TY T+I+AYG+A ++F +M EL
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELG 443
Query: 121 LV---------------KMLSED------------CEPDVWTMNCTLRAFGNSGQIDTME 153
V + SED C PD T N L G G+ +
Sbjct: 444 CVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVS 503
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + ++ G +P TFN L+ +YG+ G ++ + M ++ I TYN +++A
Sbjct: 504 QVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNAL 563
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G+ K E + MR + KP+ + L+ Y AG L V I + +
Sbjct: 564 ARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSW 623
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ LV + + M+ +Q G K D V +M+ + N A E D+
Sbjct: 624 MLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDV 683
Query: 334 V 334
+
Sbjct: 684 I 684
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNTYS 67
++A E+F+ M + G D ++ +L YG+ G + LL+ M+ + + D T +
Sbjct: 254 KRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMR-SKGLEFDEFTCT 312
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +C + D+ + D+ G +P T TYN+++ +G+A ++ E L +M
Sbjct: 313 TVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDN 372
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+CEPD T N + A+ +G D + S G+ P+ T+ ++++YGKAG +K
Sbjct: 373 NCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKA 432
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V M++ + TYN V+ G+ + M + M+ P +T +++
Sbjct: 433 LEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAV 492
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G GK + + VLR + N D FN L+ AYGR ++ + M G P
Sbjct: 493 CGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPC 552
Query: 308 KVTYRTMVRAYSTNG 322
TY ++ A + G
Sbjct: 553 ITTYNALLNALARRG 567
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 20/326 (6%)
Query: 9 EKAHELFQAMV----DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
E+A LF+ + E + QS ++ GR + A L D P V
Sbjct: 180 ERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLF-------DIIP-VE 231
Query: 65 TYSILIKSC---LKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
YS+ +K+C L A+A + + + M G+ P VTYN ++D YG+ M
Sbjct: 232 EYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSM 291
Query: 118 ELTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L L+ +M S+ E D +T + A G G +D + ++ + G +P T+N +L
Sbjct: 292 ILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQ 351
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+GKAG + + +++ M+ + +TYN ++ A+ RAG + + M S+ + P
Sbjct: 352 VFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMP 411
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ +T +++ AYG AG +K V + + + +N ++ G+ +M +L
Sbjct: 412 NAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG 322
M+ GC PD++T+ TM+ G
Sbjct: 472 CDMKLNGCPPDRITWNTMLAVCGEKG 497
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 155/342 (45%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
ML C + K ++ + M + G + + ++F L+SAYGR G + M
Sbjct: 489 MLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMV-AA 547
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P + TY+ L+ + + + ++++ DM +G +PN +Y+ L+ Y +A +
Sbjct: 548 GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGL 607
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +++ P + + Q+ ME+ + + Q+ G + + N +L
Sbjct: 608 EKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSM 667
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ + EK +++ + +VTYN +ID + R GD + E + + +++ I P
Sbjct: 668 FVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPD 727
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V+ ++++ + G ++ +L + + + + FN + Y FAE V+
Sbjct: 728 VVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIR 787
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M + GC P+++TY+ ++ Y K H KE D V K+ E
Sbjct: 788 YMIEHGCMPNELTYKIVIDGYIK--AKKH-KEAMDFVSKIKE 826
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 1/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + E ++ M GC + ++ +L+ G G +L MKN +
Sbjct: 457 LLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNC-GFE 515
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ LI + + + V + +M G P TYN L++A R + E
Sbjct: 516 PDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESV 575
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M + +P+ + + L + +G + +EK + + PS L+ + K
Sbjct: 576 VLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYK 635
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ M +Q Y +V N ++ F R L++ + ++ ++P+ VT
Sbjct: 636 CRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVT 695
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ Y G K +L+ I NS I D V +N ++ + + E +L M
Sbjct: 696 YNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMT 755
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
G +P +T+ T + Y+ NG+ A E
Sbjct: 756 ANGVQPCPITFNTFMSCYAGNGLFAEADE 784
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 40/339 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +K + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVF------------------------ 275
+ AG+ E+ V R ID ++ TVF
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 276 ----------FNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+++AYG+L F + V MQ+ GC
Sbjct: 383 GLGYFPESNVIALVLNAYGKLHEFDKANDVYMEMQEVGC 421
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKL 280
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L++ M+ +GC+ N ++ L+ +G ++A + + M+ + C P+V TYSIL
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS-GCLPNVTTYSIL 390
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K+ + M + G RPN VTY ++D + MF + + KM E C
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N ++ +G+++ K E+ Q G P+I T+N LLD+ + +E+
Sbjct: 451 TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + ++ + +VTYN V+ F RAG + + LF P +T +++ AY
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC 570
Query: 250 HAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + ++ + + + D + + L+ E L+ +G P+
Sbjct: 571 KQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNF 630
Query: 309 VTYRTMVRAY 318
T+ +VR +
Sbjct: 631 ATWNALVRCF 640
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 43/365 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AH+LF M ++GC + ++T ++S+ ++G D A L K P
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK------P 242
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA-------------- 107
V Y+ LI K + LL +M G+ PN V+Y+ +I++
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 108 ----------------------YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+ R K++ ++L + M+ + CEP+V N + +
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL-MIQDGCEPNVVAYNTLIHGLCS 361
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G ++ + ++ Q +G P++ T++IL+D + K+G S M + +VT
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++D + Q L M E P+ +T + ++ G+ E +L +
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + +N L+DA R+ + E G+ + ++ R +P+ VTY T++ +S GM
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 326 HAKEF 330
A +
Sbjct: 542 EALQL 546
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 133/331 (40%), Gaps = 36/331 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M GCDAN +FT L+ G +A L + M C+P+V Y+
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNT 354
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ + M G PN TY+ LID + ++ T +M+S
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T C + + D EK G P+ TFN + G E
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E MQ + I TYN ++DA R ++ LF+ + + ++P+ VT +++ +
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG +G L+ +F LV RG PD
Sbjct: 535 SRAGM---MGEALQ-----------LFGKALV---------------------RGTAPDS 559
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+TY TM+ AY G A + + V M E
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 6/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + + + Q M +G + F +++ Y R G ++A + + C+P
Sbjct: 84 LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF-GCKP 142
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y+ L+ + L F + L ++M G+ PN TYN L+ A +
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V+M ++ C PD T + + +G+ID + +F +PS+ +N L+D K
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKE 257
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E ++ M +V+Y+ +I++ +G+++ LF M + T
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L++ GK + + + + + V +N L+ E V + MQ+
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
GC P+ TY ++ ++ +G
Sbjct: 378 SGCLPNVTTYSILIDGFAKSG 398
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + G ++D ++ ++ + GI + F +++ Y + G E+ + +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ T+ YN ++DA + + L+ M+ + + P+ T
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------- 182
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+I+L + N VDA +L F EM +GC PD VTY TM
Sbjct: 183 -------------NILLKALCKNDRVDAAHKL--FVEM-------SNKGCPPDAVTYTTM 220
Query: 315 VRAYSTNGMKNHAKEF 330
V + G + A+E
Sbjct: 221 VSSLCKAGKIDDAREL 236
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLH----------ELKRPD 319
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
++ +++ + +I I AG +++ ++FR
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR 344
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ M + + N ++ +++ YG++ +KA +L++ M+N +P+ TYS +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR-GIEPNSITYSTI 260
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D+ L + + G+ + V Y T+I AY RA + A + ++L E
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK----RLLHELK 316
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
PD + + +G+I+ + + AG
Sbjct: 317 RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAG 350
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D+G N +++ LL AY R+G + ++ +L MK + D YS L+
Sbjct: 141 ADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRW-GIRLDTAGYSTLV 199
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + + K L+ +M G+ + YN LID +G+ A+ KM + +
Sbjct: 200 RLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIK 259
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R G + + Q G+ P F +++ G+ G ++++ +
Sbjct: 260 PDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKEL 319
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ + + Y +++D +G+ G + + +++E ++ S C L AY
Sbjct: 320 FDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQ 379
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ SVL+ ++ I + V N L++A+ E + V + ++ G PD VT
Sbjct: 380 QGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVT 439
Query: 311 YRTMVRAY 318
Y T+++A+
Sbjct: 440 YTTLMKAF 447
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A AM +EG + + F +++ G G +D+ L + M+N + Y++
Sbjct: 279 KRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNR-GFKESGAIYAV 337
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + F Q ++ + + ++ + + L +AY + + + L M +E
Sbjct: 338 LVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEG 397
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP++ +N + AF +G+ + ++ + +G+ P + T+ L+ ++ + +EK+S
Sbjct: 398 IEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVS 457
Query: 189 AVMEYMQK 196
V M++
Sbjct: 458 EVYSEMER 465
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ ELF M + G + + L+ YG+ G F A + +K + Q
Sbjct: 307 LGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALK-AENLQL 365
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +L + + ++ ++L M +GI PN V N LI+A+ A E +
Sbjct: 366 SPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVF 425
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ PDV T ++AF + + + + Y + + AG P +L D+
Sbjct: 426 QHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDRKAREMLHDA 481
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+++ MV EG + ++++AL+ A G+ + LL+ M++ +P+V T++I
Sbjct: 210 EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL-GLRPNVYTFTIC 268
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I+ +A D+ + M +G P+ VTY LIDA A + VKM +
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD L F + G +DT ++ + + ++ G P + TF IL+D KA F++ A
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M+K + TYN +I RAG ++ L M S ++P+ T + + +G
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFG 448
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G+ K + I+ + V N + + + E K + +++ G PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508
Query: 310 TYRTMVRAYSTNGMKNHA 327
TY M++ YS G + A
Sbjct: 509 TYNMMMKCYSKVGQVDEA 526
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 155/339 (45%), Gaps = 7/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E L + M D G N +FT + GR+G D+A+ + M + C P
Sbjct: 237 LGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD-EGCGP 295
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
D+ TY++LI + A + + L M G +P+ V Y TL+D + G F E
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEF- 354
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M ++ PDV T + + D ++ + GI P+++T+N L+
Sbjct: 355 --WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG E +++ M+ T TY ID FG++G+ + F M+++ I P+
Sbjct: 413 LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
V + + + G+ + ++ + + + D+V +N ++ Y ++ E +L
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M + GC+PD + +++ + G + A + D ++ M
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++A+E+F+ M DEGC + ++T L+ A +G + A L MK +
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-K 329
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y L+ D + S M G P+ VT+ L+D +A+ F E T
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + P++ T N + +G+I+ K + +S G+QP+ T+ +D +GK
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G K E M+ IV N + + G L++ + +F +R + P VT
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G+ ++ ++L + + D + N L+D+ + E + + M+
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
P VTY T++ G A E F+ ++ K
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 36/319 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +LF+ M + GC + +F LL+ +G+SG + F L + M + C+PD TY+I
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAITYNI 863
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I S K+ DK D+ + RP TY LID G AK+
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID--GLAKV--------------- 906
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
G+++ + +E+ G +P+ FNIL++ YGK G E
Sbjct: 907 ------------------GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + +Y I++D AG + + Y F ++S + P + ++
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + E+ ++ + N I+ D +N L+ G + K + E +Q G +PD
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068
Query: 309 VTYRTMVRAYSTNGMKNHA 327
TY ++R YS + HA
Sbjct: 1069 FTYNALIRGYSLSENPEHA 1087
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A+ + + P + +Y+ LI L+ +K L DM G P+ T+N L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+G++ E+ +M+S C+PD T N + + S +D + S+ +
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ T+ L+D K G E+ + E M Y +NI+I+ +G+ GD + L
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
F+ M +E I+P + LV AG+ ++ + ++ + D + +N +++ G+
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
+ E + M+ RG PD TY +++ GM AK +E LA
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY------EELQLAGL 1064
Query: 346 RPD 348
PD
Sbjct: 1065 EPD 1067
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A LF+ M D GC N F L++ YG+ G + A L + M N +P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN-EGIRP 961
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ +Y+IL+ A D+ +++ + G+ P+ + YN +I+ G+++ E
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PD++T N + G +G ++ ++ YE+ Q AG++P + T+N L+ Y +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081
Query: 182 GHFEKMSAVMEYM 194
+ E V + M
Sbjct: 1082 ENPEHAYTVYKNM 1094
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D++TY + K+ ++ +L+ M G N +YN LI ++ E
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+SE +P + T + + A G + + ++ + G++P++ TF I + G+A
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M +VTY ++IDA AG L+ + LF M++ KP V
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + G + ++ M D V F LVD + + F E +VM++
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRK 395
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+G P+ TY T++ G A + D +E +
Sbjct: 396 QGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + E A +L M G ++ + +G+SG KA E MK P
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMK-AKGIVP 470
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ + + S + + + + + + G+ P++VTYN ++ Y + E L
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ CEPDV +N + + +G++D + +++ + + P++ T+N LL GK
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + E M S +++N ++D F + +++ +F M KP +T
Sbjct: 591 GRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650
Query: 242 CSLVRAYG 249
+++ YG
Sbjct: 651 NTVI--YG 656
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 152/359 (42%), Gaps = 41/359 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +KA ELF++M+ + C NT SF LL + ++ + A + M DC+P
Sbjct: 587 LGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM-TVMDCKP 645
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----------DAYGRA 111
DV TY+ +I +K + + + + P+ VT TL+ DA A
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIA 704
Query: 112 KMF-----------------------AEMELTLV----KMLSEDCEPDVWTMNCTLRAFG 144
+ F AEM+ ++ +L+ C D + + +R
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPL-VRVLC 763
Query: 145 NSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ + ++KF + GI P++ ++N L+ + + EK + + M+ +
Sbjct: 764 KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T+N+++ G++G + ++ L++ M S R KP +T ++ + + +K
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ +SD + L+D ++ E + E M GCKP+ + ++ Y G
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA + F +V +++ L+ + G ++A L E M + C+P
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY-GCKP 926
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ILI K + L M +GIRP+ +Y L+D A E
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ S +PD N + G S +++ Y + ++ GI P + T+N L+ + G A
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ + E +Q + TYN +I + + + + +++ M + P+ T
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Query: 242 CSL 244
L
Sbjct: 1107 AQL 1109
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%)
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+++ M +E Q I+ ++T+ + + G +M+ V+ M+K + +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I ++G + ++R M SE +KPS T +L+ A G E + +L+ +++
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + F + GR E + M GC PD VTY ++ A G +A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 328 KEF 330
KE
Sbjct: 317 KEL 319
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 9/342 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ ++L MV +GC NT ++ L+ +YGR+ ++A ++ M+ C+P
Sbjct: 491 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKP 549
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 550 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 609
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + K Y Q+AG +P T++I+++ G
Sbjct: 610 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 669
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ E+ AV MQ+ ++ Y +++D +G+AG++++ ++ M ++P+ T
Sbjct: 670 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 729
Query: 242 CSLVRAYGHAGKP----EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ + K E L ++L + T+ +C D +L +M +
Sbjct: 730 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL----DMGFCGQ 785
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+M G + ++NHA F DL+ D
Sbjct: 786 LMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDR 827
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F + LL +M G +PNTVTYN
Sbjct: 461 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 520
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M C+PD T + +G +D Y++ Q+
Sbjct: 521 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 580
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VTYNI++D +A + +
Sbjct: 581 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 640
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ +V + + + D + LVD
Sbjct: 641 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 700
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M G +P+ T +++ +
Sbjct: 701 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 736
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P+ T N + ++G + ++
Sbjct: 476 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 535
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q AG +P T+ L+D + KAG + + + MQ S TY+++I+
Sbjct: 536 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 595
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A + + R + N+ D
Sbjct: 596 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 655
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V ++ +++ G E + V MQQ+ PD+ Y +V + G
Sbjct: 656 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 705
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG ++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRXEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 17/332 (5%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+Q E A EL MV C + +F ++++ + GL D+A ++E M C PD+ T
Sbjct: 386 EQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN-GCNPDIVT 444
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I D LLS++ + G +P+ VT+NTL+ + + E +V M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
DC PD T N + + G + + + G P+ +T+NI++D+ KAG +
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ ++ M + + ++TYN VI +AG +++ L R+M S + P +T SL
Sbjct: 565 EALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEMKGVLEV 298
++ +L + + + D F+N ++ + + + CFA M
Sbjct: 623 YGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMV----- 677
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC PD+ TY ++ A + + + AK+
Sbjct: 678 --SSGCMPDESTYIILLEALAYECLLDEAKQL 707
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 3/331 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F M+ GC + +++ LL A ++ + +A LL+ M+ C+PD+ TY++LI
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMR-AKGCEPDIVTYNVLI 239
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ D+ +LSD+ + G +P+ VTY ++ + ++ + E+E +M S C
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + + G +D K + G P I T++ +LD G + +
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ ++ Y + Y V+ + E L M P VT +++ +
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ V+ + + D V +N ++D +C + +L +Q GCKPD VT
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ T+++ + A++ +V M C
Sbjct: 480 FNTLLKGLCSVDRWEDAEQL--MVNMMHSDC 508
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ ELF M C + +F ++++ + GL D+A +++HM C PD+ TYS
Sbjct: 284 KEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH-GCIPDIVTYSS 342
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ D LLS + + G +P+T+ Y T++ + + E + +M+ D
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD T N + + G +D K E+ G P I T+N ++D +
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ +Q Y IVT+N ++ + E L M P T +++ +
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + L+ + + + + +N +VDA + E +L M PD
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDL 580
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
+TY T++ + G A +
Sbjct: 581 ITYNTVISNITKAGKMEEALDL 602
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 41/345 (11%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFD 80
G A ++ +++ Y R+G + A L+ M PD T++ LI++ C++ D
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPF----PPDTFTFNPLIRALCVRGRVPD 180
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ A+ DM +G P+ VTY+ L+DA +A + + + L +M ++ CEPD+ T N +
Sbjct: 181 AL-AVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239
Query: 141 RAFGNSGQID-----------------------------------TMEKCYEKFQSAGIQ 165
A N G +D +E+ + + S
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P TFN ++ S + G ++ V+++M ++ IVTY+ ++D G + L
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++S KP + ++++ + E ++ + SD D V FN ++ + +
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V+E M + GC PD VTY +++ + A E
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 151/353 (42%), Gaps = 36/353 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M +GC+ + ++ L++A G D+A ++L + + C+PD TY+ +
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH-GCKPDAVTYTPV 273
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+KS + + +V+ L ++M++ P+ VT+NT++ + + + + M C
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP-------------SIN------- 169
PD+ T + L + G++D + + +S G +P SI
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 170 ---------------TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
TFN ++ S + G ++ V+E M + + IVTYN +ID
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC 453
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ L ++S KP VT +L++ + E ++ + +SD D
Sbjct: 454 NERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDAT 513
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
FN ++ + + + L++M + GC P++ TY +V A G A
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+T G VTYNT+++ Y RA + + M PD +T N +RA G++
Sbjct: 122 ATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRV 178
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
++ G PS+ T++ILLD+ KA + + +++ M+ IVTYN++
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I+A GD+ + + + S KP VT ++++ + + +++ + + ++
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V FN +V + + V++ M + GC PD VTY +++ G + A E
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358
Query: 330 F 330
Sbjct: 359 L 359
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 126 SEDCEP-DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S C P V N ++ + G++ E+ F + G ++ T+N +++ Y +AG
Sbjct: 90 SGKCLPLPVVPCNILIKRLCSGGRVADAERV---FATLGASATVVTYNTMVNGYCRAGRI 146
Query: 185 EKMS--------------------------------AVMEYMQKYHYSWTIVTYNIVIDA 212
E AV + M S ++VTY+I++DA
Sbjct: 147 EDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDA 206
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+A +Q L MR++ +P VT L+ A + G ++ ++L + + D
Sbjct: 207 TCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V + ++ + + + E++ + M C PD+VT+ T+V + G+ + A + D
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 4/322 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K+ AH L M +G + S++ +++ Y R G DK + L+E MK +P
Sbjct: 259 LGRIKE---AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKP 314
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y +I + + + S+M QGI P+TV Y TLID + +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S D PDV T + F G + K + + G++P TF L++ Y KA
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
GH + V +M + S +VTY +ID + GDL L M ++P+ T
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+V +G E+ ++ + + + DTV + L+DAY + + + +L+ M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 302 RGCKPDKVTYRTMVRAYSTNGM 323
+G +P VT+ ++ + +GM
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGM 576
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M +G + ++ +FT L++ Y ++G AF + HM C P+V TY+ L
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTL 462
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D LL +M G++PN TYN++++ ++ E + + +
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T + A+ SG++D ++ ++ G+QP+I TFN+L++ + G E
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ +M + T+N ++ + +LK +++ M S + P T +LV+ +
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
A ++ + + + + ++ L+ + + K F E + V + M++ G DK
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A + F M + ++TA++S + + G +A L M +
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLE 418
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ LI KA + + M G PN VTY TLID +
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+++T N + SG I+ K +F++AG+ T+ L+D+Y K
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G +K +++ M TIVT+N++++ F G L+ E L M ++ I P+ T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SLV+ Y + ++ + + + + D + LV + + + E + + M+
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 301 QRGCKPDKVTYRTMVRAY 318
+G TY +++ +
Sbjct: 659 GKGFSVSVSTYSVLIKGF 676
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V +Y+I+I + + LL M +G P+ ++Y+T+++ Y R ++ +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + +P+ + + ++ E+ + + GI P + L+D + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G S M + ++TY +I F + GD+ + LF M + ++P VT
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ Y AG + V + + + V + L+D + +L M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G +P+ TY ++V +G
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSG 505
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+ N +YN +I + E L+ M + PDV + + + + G++D +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K E + G++P+ + ++ + + M + V Y +ID
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F + GD++ F M S I P +T +++ + G + G + + + D
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+V F L++ Y + + V M Q GC P+ VTY T++ G + A E
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWTIV 204
G + + +EK + G+ S+++ N+ L K ++ +A++ + + + W +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVA 247
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+YNIVI + G +K+ +L LM + P ++ ++V Y G+ +K+ ++ +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ + ++ R+ AE + M ++G PD V Y T++ + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 325 NHAKEF 330
A +F
Sbjct: 368 RAASKF 373
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E KA E+ + M+ +G +F L++ + G+ + LL M P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPN 595
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ L+K A+ DM ++G+ P+ TY L+ + +A+ E
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M + V T + ++ F + + +++ + G+ F+ D+
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 156/332 (46%), Gaps = 3/332 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++++ M+ EG + ++++AL+ A GR G K +LLE MK+ +P++ TY+I
Sbjct: 218 EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI-GLRPNIYTYTIC 276
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I++ +A D + +M +G P+ +TY LIDA A + + VKM +
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD T + FG G ++T+++ + + + G P + T+ IL+++ K+G ++
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ M + TYN +I +A L + L M S +KP+ + + YG
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G P K + IM N + +E + + + + G PD V
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
TY +++ YS G + A + L E + + C
Sbjct: 517 TYNMLMKCYSKAGQIDKATQL--LSEMISKGC 546
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK E + M +G + ++T L+ A +SG D+AF +L+ M T P
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVM-TTKGIFP 408
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+++TY+ +I LKA D+ LL +M + G++P +Y ID YG++ A+ T
Sbjct: 409 NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M P + N +L +G+I E + G+ P T+N+L+ Y KA
Sbjct: 469 ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + ++ M ++ N +I+ +AG + +F +++ ++ P+ VT
Sbjct: 529 GQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTY 588
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G GK K + + S +T+ FN L+D + + M
Sbjct: 589 NILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTM 648
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
C PD +TY T++ G ++A F
Sbjct: 649 MNCNPDVLTYNTIIYGLIREGRIDYAFWF 677
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + +Y+ L+ L + +K L DM + G PN TYN L+DA+G++K ++
Sbjct: 793 HPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYD 852
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M S CEP+ T N + A S ++ Y + S P+ T+ L+D
Sbjct: 853 LYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLL 912
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG E+ + E M Y V YNI+I+ FG++G++ LF+ M E I+P
Sbjct: 913 KAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLK 972
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ LV G+ ++ + + + DTV +N +++ G+ + E + M
Sbjct: 973 SYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032
Query: 300 QQRGCKPDKVTYRTMV 315
+ RG PD TY ++
Sbjct: 1033 KNRGISPDLYTYNALI 1048
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K L + M G N ++T + A GR+ D A+ + + M + C P
Sbjct: 245 LGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDD-EGCGP 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY++LI + A DK + L M P+ VTY TL+D +G+ ++
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PDV T + A SG +D + + GI P+++T+N ++ KA
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++E M+ T +Y + ID +G++GD + F M+ I PS
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + G+ + + + + D+V +N L+ Y + + +L M
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+GC+PD + +++ G + A
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAA 569
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 1/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA ELF+ M G N ++ LL A+G+S +K + L M+ + C+P+ T++I
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR-SRGCEPNAITHNI 871
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + +K+ +K L ++ + P TY LID +A + +ML
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ N + FG SG+ID + ++K GI+P + ++ IL++ G ++
Sbjct: 932 CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E ++ V+YN +I+ G++ L + LF M++ I P T +L+
Sbjct: 992 QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AGK + + + + +N L+ + + V + M GC P+
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNT 1111
Query: 309 VTYRTMVRAYSTNGM 323
T+ + Y G+
Sbjct: 1112 ETFAQLPNKYPRAGL 1126
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + + A ELF+ MV EG + +S+T L+ +G D+A E +K T P
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT-GLDP 1004
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMF 114
D +Y+ +I K+ D+ +L S+M +GI P+ TYN LI G A KM+
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMY 1064
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E++L EP V+T N +R SG D ++K G P+ TF L
Sbjct: 1065 EELQLV-------GLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Query: 175 LDSYGKAG 182
+ Y +AG
Sbjct: 1118 PNKYPRAG 1125
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 45/385 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + KA ELF +M + GC NT +F +LL ++ D A + M +C P
Sbjct: 595 LGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRM-TMMNCNP 653
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEME 118
DV TY+ +I ++ D M + + P+ VT TLI +GR + ++
Sbjct: 654 DVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712
Query: 119 LTLVKMLSEDCEPDVW--TMNCTLRAFGNSGQIDTME----------------------- 153
+ V W M C L I E
Sbjct: 713 MEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCK 772
Query: 154 --------KCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
++KF ++ GI P++ ++N L+D + EK + E M+
Sbjct: 773 RKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNF 832
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN+++DA G++ + ++ L+ MRS +P+ +T ++ A + K + +
Sbjct: 833 TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ D + L+D + + + E M GC P+ V Y ++ + +G
Sbjct: 893 MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEI 952
Query: 325 NHAKEFQDLVEKMDETCLAMKRPDF 349
+ A E L +KM + + RPD
Sbjct: 953 DFACE---LFKKMVKEGI---RPDL 971
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 111/282 (39%), Gaps = 40/282 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + +A ++F + G ++ ++ L+ Y ++G DKA LL M + C+P
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI-SKGCEP 548
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELT 120
DV + LI + KA D + + + P VTYN L+ G+ K+ +EL
Sbjct: 549 DVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALEL- 607
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M C P+ T N L + +D K + + P +
Sbjct: 608 FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDV------------ 655
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+TYN +I R G + + F M+ + + P VT
Sbjct: 656 -----------------------LTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVT 691
Query: 241 LCSLVRAYGHAGKPE-KLGSVLRFIDNSDIMLDTVFFNCLVD 281
LC+L+ G+ E + V+ F+ + + ++ F+ L++
Sbjct: 692 LCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S + D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 335 RIEEATWV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYGNVVVVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + V MQ+
Sbjct: 379 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANDVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 3/294 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT 100
++KA + E +K P+ ++N TY++++K + + L+ +M+ +GI+P+ T
Sbjct: 122 WEKALAFFEWLKARPELY-EINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYT 180
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
++TLI+ R + E +M SE PD T N + +G G+++ + YEK +
Sbjct: 181 FSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK 240
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
S + T+ + + Y +AG ++ + +++ M+ S V N ++ +AG +
Sbjct: 241 SVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVN 300
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
Q + +F MR+ + P+ VTL LV Y G ++ V + D +N L+
Sbjct: 301 QAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLM 360
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
A + + +L+ M++ GC PD +TYRT + Y+T GM + A+ D V
Sbjct: 361 KACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKV 414
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 130/306 (42%), Gaps = 37/306 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C+QPE+A + F+ M EG + ++ +++ YGR G ++A L E +K+ + + D
Sbjct: 190 RCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV-NWKLDT 248
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY + +A + + L+ +M G PN V NTL+ +A
Sbjct: 249 VTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKA------------ 296
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
G+++ +K + + +++G+ P+ T +IL++ Y + G
Sbjct: 297 -----------------------GKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGA 333
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ V E ++ + + YN ++ A G ++Q E + + M+ P +T +
Sbjct: 334 YDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRT 393
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ Y G + + + + DT F ++ A + + + M + G
Sbjct: 394 AMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453
Query: 304 -CKPDK 308
C PD+
Sbjct: 454 CCSPDE 459
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 4/260 (1%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
V+A L N VT I+ + +A F E +K E E + +T N L+
Sbjct: 96 VEAALESWDKSLSAKNIVTVLNNINRWEKALAFFE----WLKARPELYEINRYTYNVMLK 151
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
N Q++ EK E+ GIQP TF+ L++ + E+ E M+
Sbjct: 152 ILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVP 211
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
VTYN VID +GR G + + L+ ++S K VT ++ Y AG + + ++
Sbjct: 212 DEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLV 271
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + +S + V N L+ + + K V M+ G P VT +V Y+
Sbjct: 272 QEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRV 331
Query: 322 GMKNHAKEFQDLVEKMDETC 341
G + A E + ++ C
Sbjct: 332 GAYDQAFEVYETLKTEGWKC 351
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F M G + + L+ Y R G +D+AF + E +K T +
Sbjct: 293 LSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLK-TEGWKC 351
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV Y+ L+K+C++ ++ + +L +M G P+ +TY T ++ Y M
Sbjct: 352 DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMF 411
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYGK 180
K+++ + +PD +RA +G+I+ K +++ +G P +LL
Sbjct: 412 DKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAM 471
Query: 181 AGHFEKMSAVMEYMQKYH 198
A ++ A+++ + K++
Sbjct: 472 AKSDDERLAILDCLDKFN 489
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ + +A EL++ + +T ++ A+ + Y R+G + L++ M+++
Sbjct: 222 MYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDS-GSS 280
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ + L+ + KA ++ + + ++M T G+ P VT + L++ Y R + +
Sbjct: 281 PNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEV 340
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +E + DV N ++A G+++ E ++ + AG P T+ +++Y
Sbjct: 341 YETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYAT 400
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
G + + + + + + ++I A AG+++Q +F M
Sbjct: 401 KGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 153/309 (49%), Gaps = 2/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F+ M +G ++F AL+ ++ GL +A + M+ + Y+ L+
Sbjct: 303 AWQFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKK-GISSNAIVYNTLM 361
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ ++ + L +M +GI+P VT+N L+ AY R +E L +M +
Sbjct: 362 DAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLK 421
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + C + A+G ++ M + K + GI+P+ +++ ++ +Y +G EK A
Sbjct: 422 PNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYA 481
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V E M + +I TY ++DAF R GD + + +++LM SE++K + VT LV +
Sbjct: 482 VFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFA 541
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + V+ + + +N L++AY R + + +L+ M+ +PD +
Sbjct: 542 KQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSI 601
Query: 310 TYRTMVRAY 318
TY T++ A+
Sbjct: 602 TYSTVIYAF 610
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 174/385 (45%), Gaps = 44/385 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + +K LF+ + N + + A +S G + A+ + E M+ T
Sbjct: 222 LLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKDAWKVYESME-TDGVL 280
Query: 61 PDVNTYSILI--------------------------------KSCLKAFAFDKV--QALL 86
PD T SI+I + +K+F + + +AL+
Sbjct: 281 PDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALI 340
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
S+M +GI N + YNTL+DAY ++ E E V+M ++ +P T N + A+
Sbjct: 341 IQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYS 400
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA-VMEYMQKYHYSWTI 203
Q +E + + G++P+ N++ L+ +YG+ M+A M+K T
Sbjct: 401 RRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 460
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+Y +I A+ +G ++ +F M E IKPS T +L+ A+ G E L + +
Sbjct: 461 HSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKL 520
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + V FN LVD + + F E + V+ + G +P +TY ++ AY+ G+
Sbjct: 521 MMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGL 580
Query: 324 KNHAKEFQDLVEKMDETCLAMKRPD 348
++ + L+++M+ L RPD
Sbjct: 581 DSNIPQ---LLKEMEALRL---RPD 599
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QP+ L M D G N S+T L+SAYGR + D A MK +P ++
Sbjct: 404 QPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKV-GIKPTSHS 462
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I + + +K A+ +M +GI+P+ TY TL+DA+ R + M+
Sbjct: 463 YTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMM 522
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
SE + T N + F G +F G+QP++ T+N+L+++Y + G
Sbjct: 523 SEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDS 582
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ +++ M+ +TY+ VI AF R D K+
Sbjct: 583 NIPQLLKEMEALRLRPDSITYSTVIYAFVRVRDFKR 618
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 96 PNTVT---YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
P+ VT Y TL GRA+M ++ + + S +V N + G+
Sbjct: 208 PSLVTPKVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKDA 267
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGH--------FEKMSA--------------- 189
K YE ++ G+ P T +I++ K GH FEKM+
Sbjct: 268 WKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIK 327
Query: 190 -------------VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ M+K S + YN ++DA+ ++ +++ E LF M+++ IKP
Sbjct: 328 SFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKP 387
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG-V 295
+ VT L+ AY +P+ + S+L + + + + + CL+ AYGR K ++M
Sbjct: 388 TAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADA 447
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M++ G KP +Y M+ AYS +G A
Sbjct: 448 FLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKA 479
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S + D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 335 RIEEATWV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYGNVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ +R G+ F D++ I L +++AYG+L F + V MQ+
Sbjct: 379 NKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANDVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E AHEL + + G T S+ AL+ L D A L MK C PD
Sbjct: 45 CKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPD 103
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY +++ + K+ + + + +M +G + VTYNT+I ++KM E
Sbjct: 104 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 163
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+++SE P T L G I+ E +++ G +P+ +NILL+ Y AG
Sbjct: 164 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 223
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK+ + E M + + I +Y +VID G L F+ + ++P +T
Sbjct: 224 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 283
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ G +G+ E+ S+ ++ I + +N L+ G+ AE + E + +
Sbjct: 284 LLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK 343
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++R YS +G +A
Sbjct: 344 GWKPNVFTYNALIRGYSVSGSPENA 368
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ELF++MV++G + + +S+T ++ G + S + + + +PD+ TY++
Sbjct: 226 EKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNL 284
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L +DM +GI PN TYN+LI G+A AE ++L++
Sbjct: 285 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 344
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+P+V+T N +R + SG + Y + G +P+ +T+
Sbjct: 345 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 387
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M++ GC+ N + LL+ Y +G +K L E M PD+ +Y++
Sbjct: 191 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPDIKSYTV 249
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + + ++ G+ P+ +TYN LI G++ E M +
Sbjct: 250 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+++T N + G +G+ K YE+ + G +P++ T+N L+ Y +G E
Sbjct: 310 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 369
Query: 189 AV 190
A
Sbjct: 370 AA 371
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 6/258 (2%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L+ G+ T +YN LI + E +M C+PD +T + L
Sbjct: 53 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 112
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A G S +I+ M K E+ + G + + T+N ++ K+ ++ + + +S
Sbjct: 113 AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 172
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T TY ++D + G+++ E LF M +P+C L+ Y AG EK+ +
Sbjct: 173 TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 232
Query: 262 RFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + D + ++D A GRL + + + G +PD +TY ++
Sbjct: 233 ESMVEQGMNPDIKSYTVVIDTLCADGRLN---DGLSYFKQLTDMGLEPDLITYNLLIHGL 289
Query: 319 STNGMKNHAKEFQDLVEK 336
+G A + +EK
Sbjct: 290 GKSGRLEEALSLYNDMEK 307
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A L+ M +G N ++ +L+ G++G +A + E + +P
Sbjct: 289 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL-AKGWKP 347
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+V TY+ LI+ + + + A M G RPN+ TY L
Sbjct: 348 NVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 3/294 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT 100
++KA + E +K P+ ++N TY++++K + + L+ +M+ +GI+P+ T
Sbjct: 122 WEKALAFFEWLKARPELY-EINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYT 180
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
++TLI+ R + E +M SE PD T N + +G G+++ + YEK +
Sbjct: 181 FSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK 240
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
S + T+ + + Y +AG ++ + +++ M+ S V N ++ +AG +
Sbjct: 241 SVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVN 300
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
Q + +F MR+ + P+ VTL LV Y G ++ V + D +N L+
Sbjct: 301 QAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLM 360
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
A + + +L+ M++ GC PD +TYRT + Y+T GM + A+ D V
Sbjct: 361 KACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKV 414
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 130/306 (42%), Gaps = 37/306 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C+QPE+A + F+ M EG + ++ +++ YGR G ++A L E +K+ + + D
Sbjct: 190 RCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV-NWKLDT 248
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY + +A + + L+ +M G PN V NTL+ +A
Sbjct: 249 VTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKA------------ 296
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
G+++ +K + + +++G+ P+ T +IL++ Y + G
Sbjct: 297 -----------------------GKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGA 333
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ V E ++ + + YN ++ A G ++Q E + + M+ P +T +
Sbjct: 334 YDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRT 393
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ Y G + + + + DT F ++ A + + + M + G
Sbjct: 394 AMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453
Query: 304 -CKPDK 308
C PD+
Sbjct: 454 CCSPDE 459
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 4/260 (1%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
V+A L N VT I+ + +A F E +K E E + +T N L+
Sbjct: 96 VEAALESWDKSLSAKNIVTVLNNINRWEKALAFFEW----LKARPELYEINRYTYNVMLK 151
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
N Q++ EK E+ GIQP TF+ L++ + E+ E M+
Sbjct: 152 ILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVP 211
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
VTYN VID +GR G + + L+ ++S K VT ++ Y AG + + ++
Sbjct: 212 DEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLV 271
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + +S + V N L+ + + K V M+ G P VT +V Y+
Sbjct: 272 QEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRV 331
Query: 322 GMKNHAKEFQDLVEKMDETC 341
G + A E + ++ C
Sbjct: 332 GAYDQAFEVYETLKTEGWKC 351
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F M G + + L+ Y R G +D+AF + E +K T +
Sbjct: 293 LSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLK-TEGWKC 351
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV Y+ L+K+C++ ++ + +L +M G P+ +TY T ++ Y M
Sbjct: 352 DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMF 411
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYGK 180
K+++ + +PD +RA +G+I+ K +++ +G P +LL
Sbjct: 412 DKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAM 471
Query: 181 AGHFEKMSAVMEYMQKYH 198
A + ++ A+++ + K++
Sbjct: 472 AKNDDERLAILDCLDKFN 489
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ + +A EL++ + +T ++ A+ + Y R+G + L++ M+++
Sbjct: 222 MYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDS-GSS 280
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ + L+ + KA ++ + + ++M T G+ P VT + L++ Y R + +
Sbjct: 281 PNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEV 340
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +E + DV N ++A G+++ E ++ + AG P T+ +++Y
Sbjct: 341 YETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYAT 400
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
G + + + + + + ++I A AG+++Q +F M
Sbjct: 401 KGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 4/322 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K+ AH L M +G + S++ +++ Y R G DK + L+E MK +P
Sbjct: 702 LGRIKE---AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKP 757
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y +I + + + S+M QGI P+TV Y TLID + +
Sbjct: 758 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 817
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S D PDV T + F G + K + + G++P TF L++ Y KA
Sbjct: 818 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 877
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
GH + V +M + S +VTY +ID + GDL L M ++P+ T
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+V +G E+ ++ + + + DTV + L+DAY + + + +L+ M
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 302 RGCKPDKVTYRTMVRAYSTNGM 323
+G +P VT+ ++ + +GM
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGM 1019
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M +G + ++ +FT L++ Y ++G AF + HM C P+V TY+ L
Sbjct: 847 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTL 905
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D LL +M G++PN TYN++++ ++ E + + +
Sbjct: 906 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T + A+ SG++D ++ ++ G+QP+I TFN+L++ + G E
Sbjct: 966 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ +M + T+N ++ + +LK +++ M S + P T +LV+ +
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 1085
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
A ++ + + + + ++ L+ + + K F E + V + M++ G DK
Sbjct: 1086 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 1144
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A + F M + ++TA++S + + G +A L M +
Sbjct: 803 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLE 861
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ LI KA + + M G PN VTY TLID +
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+++T N + SG I+ K +F++AG+ T+ L+D+Y K
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G +K +++ M TIVT+N++++ F G L+ E L M ++ I P+ T
Sbjct: 982 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SLV+ Y + ++ + + + + D + LV + + + E + + M+
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101
Query: 301 QRGCKPDKVTYRTMVRAY 318
+G TY +++ +
Sbjct: 1102 GKGFSVSVSTYSVLIKGF 1119
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V +Y+I+I + + LL M +G P+ ++Y+T+++ Y R ++ +
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + +P+ + + ++ E+ + + GI P + L+D + K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G S M + ++TY +I F + GD+ + LF M + ++P VT
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ Y AG + V + + + V + L+D + +L M +
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G +P+ TY ++V +G
Sbjct: 928 IGLQPNIFTYNSIVNGLCKSG 948
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+ N +YN +I + E L+ M + PDV + + + + G++D +
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K E + G++P+ + ++ + + M + V Y +ID
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F + GD++ F M S I P +T +++ + G + G + + + D
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+V F L++ Y + + V M Q GC P+ VTY T++ G + A E
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWTIV 204
G + + +EK + G+ S+++ N+ L K ++ +A++ + + + W +
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVA 690
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+YNIVI + G +K+ +L LM + P ++ ++V Y G+ +K+ ++ +
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ + ++ R+ AE + M ++G PD V Y T++ + G
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 325 NHAKEF 330
A +F
Sbjct: 811 RAASKF 816
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E KA E+ + M+ +G +F L++ + G+ + LL M P+
Sbjct: 980 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPN 1038
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ L+K A+ DM ++G+ P+ TY L+ + +A+ E
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M + V T + ++ F + + +++ + G+ F+ D+
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 1153
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 164/336 (48%), Gaps = 13/336 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKS 72
LF M + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIEL 59
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + K A+ S + G P+ V YN +I+ +G+AK+F E + +M + P+
Sbjct: 60 SRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPN 119
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 120 TSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 179
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG
Sbjct: 180 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 239
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ EK ++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++
Sbjct: 240 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQ 299
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TM+ AY G+ HAK +KRPD
Sbjct: 300 TMIVAYERAGLVAHAKRL----------LHELKRPD 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K + + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSNVIAVVLNAY 406
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + +I + + +F MR P +
Sbjct: 341 RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIA 400
Query: 243 SLVRAYGHAGKPEKLGSV 260
++ AYG + +K V
Sbjct: 401 VVLNAYGKLQEFDKANDV 418
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 37/365 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--- 58
+GK K KA + + + G + ++ L+S Y +SG D A +L+ M PD
Sbjct: 105 IGKTK---KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVT 161
Query: 59 ----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
C PDV TY+ILI++ K + LL +M
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 221
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+G +P+ VTYN LI+ + E L M S C+P+V T N LR+ ++G+
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
EK G PS+ TFNIL++ + G + ++E M + + ++YN ++
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341
Query: 211 DAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
F + + + +EYL +M S P VT +L+ A GK + +L + +
Sbjct: 342 HGFCKEKKMDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-K 328
+ +N ++D ++ +L+ M+++G KPD +TY ++V S G + A K
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 329 EFQDL 333
F DL
Sbjct: 461 FFHDL 465
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M ++G + ++ L++ + G D+A L +M + CQP+V T++I+
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNII 270
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LLSDM +G P+ VT+N LI+ R + L KM C
Sbjct: 271 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + + S G P I T+N LL + K G +
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 390
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G ++ L MR + +KP +T SLV
Sbjct: 391 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 450
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ ++ I + + +N ++ + + L M + CKP +
Sbjct: 451 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 510
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY ++ + G+ AKE DL+ ++
Sbjct: 511 TYTILIEGIAYEGL---AKEALDLLNEL 535
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G + F LE M D PD+ + LI+ + K ++ + G P+
Sbjct: 69 RNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+TYN LI Y ++ E++ L + + PDV T N LR +SG++ + ++
Sbjct: 128 ITYNVLISGYCKS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
P + T+ IL+++ K + +++ M+ +VTYN++I+ + G
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L + M S +P+ +T ++R+ G+ +L + V FN
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L++ R +LE M GC P+ ++Y ++ + + A E+ D++
Sbjct: 305 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ +R F G+ E + +G P + T+N+L+ Y K+G + V
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M + + +VTYN ++ +G LKQ ME L R ++ E P +T L+ A
Sbjct: 150 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE-CYPDVITYTILIEA-- 203
Query: 250 HAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
K +G ++ +D N D V +N L++ + E L M GC+P
Sbjct: 204 -TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 262
Query: 307 DKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+ +T+ ++R+ + G A K D++ K
Sbjct: 263 NVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
LR +G+++ K E G P I L+ + + G +K + VME +++
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
++TYN++I + ++G++ +++ + P VT +++R +GK ++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
VL + D + + L++A + + +L+ M+ +G KPD VTY ++
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 320 TNGMKNHAKEF 330
G + A +F
Sbjct: 241 KEGRLDEAIKF 251
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A +L M +G + ++++L+S R G D+A ++ +P
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL-GIRP 472
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
+ TY+ ++ K+ D+ L+ M ++ +P TY LI+
Sbjct: 473 NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 9/341 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ ++L MV +GC NT ++ L+ +YGR+ ++A ++ M+ C+P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKP 432
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + + K Y Q+AG +P T++I+++ G
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ E+ AV MQ+ ++ Y +++D +G+AG++++ ++ M + P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTC 612
Query: 242 CSLVRAYGHAGKP----EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ + K E L ++L + T+ +C D +L +M +
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL----DMGYCGQ 668
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+M G + + ++NHA F DL+ D
Sbjct: 669 LMASTGHPAHMFLLKMPAAGPNGENVRNHANNFLDLMHSED 709
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F + LL +M G +PNTVTYN
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M C+PD T + +G +D Y++ Q+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VTYNI++D +A + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSA 523
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ +V + + + D + LVD
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M G P+ T +++ +
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTF 619
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P+ T N + ++G + ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q AG +P T+ L+D + KAG + + + MQ S TY+++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A + + R + N+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPD 538
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V ++ +++ G E + V MQQ+ PD+ Y +V + G
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 4/332 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQ---SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M D+G ++T ++T ++ ++ + D+A + +HM + +P+
Sbjct: 178 KRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID-KGVRPN 236
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+TY+ LI L + +V +L +MST G++P+ Y L+D + E
Sbjct: 237 NHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFD 296
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + +P+V L + G + M + G+ P + FNI+ +Y K
Sbjct: 297 SVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKA 356
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + M++ S IVTY +IDA + G + F M E + P
Sbjct: 357 MIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFS 416
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SLV K EK + + + I LDTVFFN L+ R E + ++++M +
Sbjct: 417 SLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
G +PD ++Y T+V + G + A + D++
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVI 508
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 1/276 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ G + S+ L+ + +G D+A LL+ + + +PD TY+ L
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI-GLKPDKVTYNTL 523
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA D +L +M +G+ P+ VTYNT++ + F+E + + M++
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ +++T N + + +D K + S +Q I T NI++ + K G E
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + Y + TY ++ + + G L++++ LF M P+ L +LVR
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
H G + G+ L +D + L+ + L+ Y R
Sbjct: 704 HRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A +F +++ +G N + LL Y G + S L+ M PD
Sbjct: 286 GRCTE---ARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN-GVSPD 341
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I+ + K D+ + M Q + PN VTY LIDA + + L
Sbjct: 342 HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD++ + + + + E+ + + GI+ FN L+ + + G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ M + +++YN ++D G + + L ++ S +KP VT
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y A + + S+ R + + D V +N ++ + F+E K + M
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+ + TY ++ N + A K F L K
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 137/331 (41%), Gaps = 4/331 (1%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M+DEG + F++L+ ++KA L + + + D ++ L+ +
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ-GIRLDTVFFNTLMCNLC 458
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ + Q L+ M G+RP+ ++YNTL+D + E L ++S +PD
Sbjct: 459 REGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKV 518
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L + + +ID + + G+ P + T+N +L + G F + + M
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 578
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
I TYNI+I+ + + + +F + S+ ++ T ++ A G+
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E + I ++ D + + + + E+ + M++ G P+ +
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
VR G N A + + K+DE +++
Sbjct: 699 VRWLLHRGDINRAGAY---LSKLDEKNFSLE 726
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI+P+ V YN++I+ +G+AK+F E + +M PD + + L + +
Sbjct: 69 RLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQ 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + + ++ ++ +G++ + + ++ G + D V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M + G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N + +G + + + ++ + GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++D + + K + + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G D ++ AY
Sbjct: 383 GLGYFSDSNVISLVLNAY 400
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED----------------------- 128
+ + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLFDD-ALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 129 -------------CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+PD+ N + FG + + + AG+ P +++ LL
Sbjct: 62 KAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ K+ + LF MR I+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + DI + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ M RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF +M G + N S+ LL YG + LF +A L M+ D + +
Sbjct: 160 GQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KDIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN +TY+T+I +G+ +
Sbjct: 219 VVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + P+ V +
Sbjct: 335 RIEEATWV---------------FRQAIDA-GEVKDITVFERMIDLFSKYKKYPNVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + + MQ
Sbjct: 379 EKMRGLGY------------FSDSNVISL-------VLNAYGKLHEFDKANDMYMGMQDE 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + FG G D +K + + + ++ L++ K + K ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+++ +V YN +I+ FG+A ++ L MR + P V+ +L+ Y
Sbjct: 67 FSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVE 126
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K + SV + +LD N ++D YG+L E + M++ G +P+ V+
Sbjct: 127 NQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y T++R Y + A L+++ D
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKD 214
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
R + P T +L+ +G G + S L+ ++ + D V ++ L++ +L +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
++ + +++ G KPD V Y +M+ + G +E + L+ +M E + PD
Sbjct: 61 SKAISIFSRLKRAGIKPDLVAYNSMINVF---GKAKLFREARSLISEMREAGVV---PD 113
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENR 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 133/309 (43%), Gaps = 54/309 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL------MRSERIKP 236
++ +++ + +I I AG +++ ++FR ++ +
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIXVFE 359
Query: 237 SCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ L S + YG+ + +K+ + F D++ I L +++AYG+L F + V
Sbjct: 360 RMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL-------ILNAYGKLHEFDKANDV 412
Query: 296 LEVMQQRGC 304
MQ+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 163/359 (45%), Gaps = 39/359 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---------- 53
+ KQ + AH LF M+ +G + +++ L++ + + GLFD +F L+ M
Sbjct: 172 RAKQWQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLV 231
Query: 54 -------------------------KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
K + + PD+ +++I KA F + + LL +
Sbjct: 232 LYSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQE 291
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ P+T +Y+TL+ Y + F E +M +C D+ T N + +G
Sbjct: 292 MRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQM 351
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I + + + GI+P++ ++N +L YG+AG F + + MQ +VTYN
Sbjct: 352 IKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNT 411
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I +G++ + + L + M+S I+P+ +T +++ + AGK ++ + + S
Sbjct: 412 MISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSG 471
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +D + + ++ AY + A K +L ++Q PD V+ T + + G + A
Sbjct: 472 VKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQ----PDNVSRETAITILARAGKVDEA 526
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 5/316 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K +A L Q M D G + +T S++ LL+ Y + F +A SL M N +C D
Sbjct: 277 GKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEM-NEVECPID 335
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T +I+I + + M GI PN V+YNT++ YG A +F E
Sbjct: 336 LTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFS 395
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + +V T N + +G S + D ++ QS GIQP+ T++ ++ + KAG
Sbjct: 396 LMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAG 455
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + ++ + Y +I A+ +AG + + L +E +P V+
Sbjct: 456 KLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLL----NELKQPDNVSRE 511
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ + AGK ++ V R ++ + D F C++D + R + +A + V E M++
Sbjct: 512 TAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVEVFEKMREV 571
Query: 303 GCKPDKVTYRTMVRAY 318
G PD ++ A+
Sbjct: 572 GHFPDSNVIALVLNAF 587
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 147/335 (43%), Gaps = 36/335 (10%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S ++S R + ++ ++L+ M P +N Y+++I++ L+A + L +
Sbjct: 126 SIRFMISILSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFDE 185
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE 130
M +G+ P+ TY+TLI + + +F +ME L+++ + C+
Sbjct: 186 MLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCD 245
Query: 131 ------------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
PD+ N + +G + ++ + G+ PS +++
Sbjct: 246 YSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYS 305
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y F + ++ M + + T NI+ID +G+ +K+ + F MR
Sbjct: 306 TLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKM 365
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I+P+ V+ +++R YG AG + + + + + V +N ++ YG+ +
Sbjct: 366 GIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKA 425
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+++ MQ RG +P+ +TY T++ + G + A
Sbjct: 426 TNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRA 460
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 53/341 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDC 59
G+ + ++A F M G + N S+ +L YG +GLF +A FSL++ MK P
Sbjct: 347 GQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQ-MKGVPQ- 404
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+V TY+ +I K+ DK L+ +M ++GI+PN +TY+T+I + +A +
Sbjct: 405 --NVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAM 462
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
K+ + + D + A+ +G + ++ + + QP + +
Sbjct: 463 LFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELK----QPDNVSRETAITILA 518
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG ++ V I + +ID F R
Sbjct: 519 RAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRE----------------------- 555
Query: 240 TLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
R Y H + EK+ V F D++ I L +++A+G+L+ F + +
Sbjct: 556 ------RKYAHVVEVFEKMREVGHFPDSNVIAL-------VLNAFGKLRKFERADALYKQ 602
Query: 299 MQQRGCK-PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M + GC PD+V ++ M+ Y G + + L EK+D
Sbjct: 603 MYEEGCVFPDEVHFQ-MLGLY---GARMDFNMVESLFEKLD 639
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ R G + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSXVIALVLNAY 400
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y + G
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ +AHEL + G T S+ AL+ L D A L MK C P
Sbjct: 751 LCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL-GCDP 809
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY++++ + K+ + + + +M +G VTYNT+I ++KM E
Sbjct: 810 DEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLY 869
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K++SE P T L G+I+ E +++ G +P+ +NILL+ Y A
Sbjct: 870 YKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLA 929
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ EK+ + + M + I +Y ++I A AG L FR + ++P +T
Sbjct: 930 GNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITY 989
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G +G+ E+ S+ ++ S I + +N L+ G+ AE + E + +
Sbjct: 990 NLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLK 1049
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++ YS +G ++A
Sbjct: 1050 NGWKPNVFTYNALIGGYSVSGSTDNA 1075
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+++ M +G + ++++ L+ A+G+ + + LL M++ +P+V +Y+I
Sbjct: 200 EAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDV-ETVVWLLREMEDH-GVKPNVYSYTIC 257
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I+ +A F++ +L M +G +P+ VT LI A ++ + KM + D
Sbjct: 258 IRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQ 317
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD T L G++G ++ + + ++ G ++ + ++D+ + G ++ S
Sbjct: 318 KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASD 377
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V + M++ +YN +I F +A L LF M P+ T + YG
Sbjct: 378 VFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYG 437
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G+ K + + I+ D V N ++ + + K V ++ G PD +
Sbjct: 438 KSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI 497
Query: 310 TYRTMVRAYSTNGMKNHA-KEFQDLVE 335
TY M++ S + A K F +++E
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIE 524
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 143/338 (42%), Gaps = 4/338 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E+A+++ Q M DEGC + + T L+ +G A + MK + D +
Sbjct: 260 VLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKAS-DQK 318
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY L+ C V + + M G N V Y ++DA + E
Sbjct: 319 PDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDV 378
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + EP ++ N + F + +++ + + G P+ T+ + ++ YGK
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGK 438
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G K E M+ +V N V+ + ++G L + +F ++S + P +T
Sbjct: 439 SGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNIT 498
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A ++ V + + + D + N L+D + E + ++
Sbjct: 499 YTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELK 558
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ P TY T++ G + KE L+E+M+
Sbjct: 559 EMNLDPTDCTYNTLLAGL---GREGKVKEVMHLLEEMN 593
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ELFQ MVD+G + + +S+T L+ A +G + + S + +PD+ TY++
Sbjct: 933 EKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL-GLEPDLITYNL 991
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI ++ ++ +L +DM GI PN TYN+LI G+ AE ++L
Sbjct: 992 LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+P+V+T N + + SG D Y + G P+ +T+
Sbjct: 1052 WKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 132/324 (40%), Gaps = 37/324 (11%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + A ELF M G N ++ ++ YG+SG KA E MK + PDV
Sbjct: 403 KADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMK-SKGIVPDV 461
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ ++ S K+ + + ++ + G+ P+ +TY +I +A E +
Sbjct: 462 VAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSE 521
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ C PDV +N + +G+ + K + + + + P+ T+N LL G+ G
Sbjct: 522 MIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGK 581
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ ++E M Y ++TYN V+D + G ++ Y ++ + +K L S
Sbjct: 582 VKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG---EVNYALGMLYNMTMKGCMPDLSS 638
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
A K ++L R F +MK VL
Sbjct: 639 YNTALHGLVKEDRLTEAFRI-------------------------FCQMKKVL------- 666
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
PD T T++ ++ NG+ N A
Sbjct: 667 -APDYTTLCTILPSFVKNGLMNEA 689
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 130/318 (40%), Gaps = 37/318 (11%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
++F M + AN +F + + G G A L MK + TY+ LI
Sbjct: 133 QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEA-GIVLNSYTYNGLIYF 191
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+K+ + + M+T GI P+ TY+ L+ A+G+ D E
Sbjct: 192 LVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK----------------RDVETV 235
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
VW + + + G++P++ ++ I + G+AG FE+ +++
Sbjct: 236 VWLL--------------------REMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQ 275
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+ +VT ++I AG + + +F M++ KP VT +L+ G G
Sbjct: 276 KMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNG 335
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + + + V + +VDA ++ E V + M+Q+G +P + +Y
Sbjct: 336 DSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYN 395
Query: 313 TMVRAYSTNGMKNHAKEF 330
+++ + NHA E
Sbjct: 396 SLISGFLKADRLNHALEL 413
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 11/333 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E H L + ++ G A+ SF +L+ + +K+ E++ + D S
Sbjct: 688 EALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDF-FLSP 746
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ K+ + L+ + G+ T +YN LI + E +M
Sbjct: 747 LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLG 806
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKM 187
C+PD +T N L A G S +I+ M K ++ G + + T+N ++ K+ +E M
Sbjct: 807 CDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAM 866
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + +S T TY ++D + G ++ E LF M KP+ L+
Sbjct: 867 DLYYKLMSE-GFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925
Query: 248 YGHAGKPEKLGSVLR-FID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
Y AG EK+ + + +D N DI TV L A GRL + + + G
Sbjct: 926 YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTA-GRLN---DSLSYFRQLTELG 981
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+PD +TY ++ +G A + +EK
Sbjct: 982 LEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEK 1014
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 1/308 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ +L ++ ++GL ++A L+ P + D +++ L++ LK +K +
Sbjct: 672 TLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAEN 731
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
++ I + + LI ++K E + K S + N + +
Sbjct: 732 IALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENL 791
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
ID E + + + G P T+N++LD+ GK+ E M V + M Y T VTYN
Sbjct: 792 IDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNT 851
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I ++ L + L+ + SE P+ T L+ GK E + + +
Sbjct: 852 IISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYG 911
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA- 327
+ +N L++ Y ++ + + M +G PD +Y ++ A T G N +
Sbjct: 912 CKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSL 971
Query: 328 KEFQDLVE 335
F+ L E
Sbjct: 972 SYFRQLTE 979
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ M + ++ Q ++ ++ TF + S G G + M++ TY
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I ++G ++ ++++M ++ I PS T L+ A+G E + +LR +++
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMED 244
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + + + G+ F E +L+ M+ GCKPD VT +++ G +
Sbjct: 245 HGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSD 304
Query: 327 AKE 329
AK+
Sbjct: 305 AKD 307
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 124/317 (39%), Gaps = 38/317 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F + + D ++ LL+ GR G + LLE M N+ P
Sbjct: 541 LYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEM-NSNSYPP 599
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ ++ K + +L +M+ +G P+ +YNT + + E
Sbjct: 600 NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF 659
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + PD T+ L +F +G + + + E G + ++F+ L++ K
Sbjct: 660 CQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILK 718
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
EK ++ I I++D F +L L+R +
Sbjct: 719 RAGMEK---------SIEFAENIALSRILLDDF----------FLSPLIRHLCKSKKALE 759
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV+ + E LG + L T +N L+ +G+ M+
Sbjct: 760 AHELVKKF------ESLG----------VSLKTGSYNALICGLVDENLIDVAEGLFSEMK 803
Query: 301 QRGCKPDKVTYRTMVRA 317
+ GC PD+ TY ++ A
Sbjct: 804 RLGCDPDEFTYNLILDA 820
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
LG+ + E+A LF M G N ++ +L+ G+ G +A + E + KN +
Sbjct: 996 LGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKN--GWK 1053
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
P+V TY+ LI + + D A M G PN+ TY L
Sbjct: 1054 PNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYXKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYX 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ AHEL + + G T S+ AL+ L D A L MK C P
Sbjct: 741 LCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDP 799
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY +++ + K+ + + + +M +G + VTYNT+I ++KM E
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLY 859
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++SE P T L G I+ E +++ G +P+ +NILL+ Y A
Sbjct: 860 YQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIA 919
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G EK+ + E M + + I +Y +VID G L F+ + ++P +T
Sbjct: 920 GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITY 979
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G +G+ E+ S+ ++ I + +N L+ G+ AE + E +
Sbjct: 980 NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G KP+ TY ++R YS +G +A
Sbjct: 1040 KGWKPNVFTYNALIRGYSVSGSPENA 1065
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 144/317 (45%), Gaps = 9/317 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G E++ A+ +G + N S+TA + A + G D+A + + MK P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQ 380
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEME 118
+Y+ LI LKA F++ L + M+ G PN T+ I+ +G++ K E
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M S+ PDV N L +G++ ++ + + ++ GI P T+ +++
Sbjct: 441 L----MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KA + ++ + M + + ++ N +ID +AG + +F ++ ++P+
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +L+ G GK +++ +L ++++ + + +N ++D + +L
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616
Query: 299 MQQRGCKPDKVTYRTMV 315
M GC PD +Y T++
Sbjct: 617 MTMNGCMPDLSSYNTVM 633
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 147/357 (41%), Gaps = 37/357 (10%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M + G N ++ L+ +SG +A + + M P V TYS+L+ +
Sbjct: 159 LPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA-ADGVVPTVRTYSVLMLAFG 217
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + V LL +M +G+RPN +Y I G+A E L KM E C+PDV
Sbjct: 218 KRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVV 277
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T ++ ++G++ + + K +++ +P T+ LLD G +G +S + +
Sbjct: 278 TNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNAL 337
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY------ 248
+ Y+ +V+Y +DA + G + + +F M+ + I P + SL+ +
Sbjct: 338 KADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRF 397
Query: 249 ---------------------------GHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCL 279
H E L ++ R+ + + I+ D V N +
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ + K V ++ G PD +TY M++ S + A K F +++E
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 141/362 (38%), Gaps = 36/362 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E+A+ + + M +EGC + + T L+ +G A + MK + D +
Sbjct: 250 VLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS-DQK 308
Query: 61 PDVNTYSILIKSC---------------LKAFAF--------------------DKVQAL 85
PD TY L+ C LKA + D+ +
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M +GI P +YN+LI + +A F M P+ +T + G
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+ K YE +S GI P + N +L K G V ++ S +T
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++I +A + + +F M R P + + SL+ AG+ + + +
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ +N L+ GR E+ +LE M P+ +TY T++ NG N
Sbjct: 549 EMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVN 608
Query: 326 HA 327
+A
Sbjct: 609 YA 610
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ELF++MV++G + + +S+T ++ G + S + + + +PD+ TY++
Sbjct: 923 EKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNL 981
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L +DM +GI PN TYN+LI G+A AE ++L++
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+P+V+T N +R + SG + Y + G +P+ +T+
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 2/335 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E L M G N S+T + G++G ++A+ +L M+ C+P
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEE-GCKP 274
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T ++LI+ A + + M +P+ VTY TL+D G + +
Sbjct: 275 DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIW 334
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ ++ +V + + A G++D +++ + GI P ++N L+ + KA
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKA 394
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + + +M + + T+ + I+ G++G+ + + LM+S+ I P V
Sbjct: 395 DRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAG 454
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ V + I D + + ++ + E + M +
Sbjct: 455 NAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
C PD + +++ G N A K F +L E
Sbjct: 515 NRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKE 549
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M++ GC+ N + LL+ Y +G +K L E M PD+ +Y++
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPDIKSYTV 946
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + + ++ G+ P+ +TYN LI G++ E M +
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+++T N + G +G+ K YE+ + G +P++ T+N L+ Y +G E
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 189 A 189
A
Sbjct: 1067 A 1067
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 13/316 (4%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS----- 67
++F M + AN +F + A G G A L MK +N Y+
Sbjct: 122 QVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIV---LNAYTYNGLI 178
Query: 68 -ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+KS A D +A+ +D G+ P TY+ L+ A+G+ + + L +M +
Sbjct: 179 YFLVKSGFDREAMDVYKAMAAD----GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEA 234
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P+V++ +R G +G+++ + K + G +P + T +L+ AG
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
V M+ VTY ++D G +GD + + ++ ++++ + V+ + V
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A G+ ++ V + I+ +N L+ + + F + M G P
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTP 414
Query: 307 DKVTYRTMVRAYSTNG 322
+ T+ + + +G
Sbjct: 415 NGYTHVLFINYHGKSG 430
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 41/342 (11%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK----------- 81
+L ++ RSGL +A + PD + D ++ L++ LK +K
Sbjct: 666 ILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASS 725
Query: 82 ------------------------VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
L+ G+ T +YN LI +
Sbjct: 726 GLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIA 785
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M C+PD +T + L A G S +I+ M K E+ + G + + T+N ++
Sbjct: 786 EELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K+ ++ + + +S T TY ++D + G+++ E LF M +P+
Sbjct: 846 LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
C L+ Y AG EK+ + + + D + ++D A GRL +
Sbjct: 906 CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN---DGLS 962
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ + G +PD +TY ++ +G A + +EK
Sbjct: 963 YFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 135/354 (38%), Gaps = 42/354 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +F + G + ++T ++ ++ D+A + M C P
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN-RCAP 519
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI KA ++ + ++ + P TYNTL+ GR E+ L
Sbjct: 520 DVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLL 579
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M S P++ T N L +G+++ G P ++++N ++ K
Sbjct: 580 EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKE 639
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR---LMRSERIKPSC 238
++ + M+K + T ++ +F R+G +K+ + R L ++ S
Sbjct: 640 DRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSS 698
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV------------------ 280
V SL+ EK I +S ++LD +F + ++
Sbjct: 699 VH--SLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKK 756
Query: 281 ----------DAYGRLKCFAEMKGVLEV-------MQQRGCKPDKVTYRTMVRA 317
+Y L C + ++++ M++ GC PD+ TY ++ A
Sbjct: 757 FENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
Query: 110 RAKMFAEMELTLVKMLSEDCEPDVW----TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
R+ A+ E L LS +P V + N L G++ + + ++ Q I+
Sbjct: 74 RSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIK 133
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
++ TF + + G G + M++ TYN +I ++G ++ +
Sbjct: 134 ANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++ M ++ + P+ T L+ A+G E + +L ++ + + + + G+
Sbjct: 194 YKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQ 253
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
E +L M++ GCKPD VT +++ G AK+
Sbjct: 254 AGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKD 297
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 141/359 (39%), Gaps = 65/359 (18%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + +A ++F + + + ++ LL+ GR G + LLE M N+
Sbjct: 530 MLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-NSNSFP 588
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------- 112
P++ TY+ ++ K + +L M+ G P+ +YNT++ YG K
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM--YGLVKEDRLDEAF 646
Query: 113 -MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI--- 168
MF +M+ L PD T+ L +F SG M++ + +QP
Sbjct: 647 WMFCQMKKVLA--------PDYATVCTILPSFVRSG---LMKEALHTVREYILQPDSKVD 695
Query: 169 -NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
++ + L++ K EK ++ I + +++D DL +L
Sbjct: 696 RSSVHSLMEGILKRDGTEK---------SIEFAENIASSGLLLD------DL----FLSP 736
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS----VLRFIDNSDIML------------ 271
++R + LV+ + + G K GS + +D I +
Sbjct: 737 IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796
Query: 272 ---DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
D ++ ++DA G+ +M + E M +G K VTY T++ + M + A
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A L+ M +G N ++ +L+ G++G +A + E + +P
Sbjct: 986 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL-AKGWKP 1044
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+V TY+ LI+ + + + A M G RPN+ TY L
Sbjct: 1045 NVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 461
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D+G N +++ LL AY R+G + ++ +L MK + D YS L+
Sbjct: 141 ADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRW-GIRLDTAGYSTLV 199
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + + K L+ +M G+ + YN LID +G+ A+ KM + +
Sbjct: 200 RLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIK 259
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R G + + Q G+ P F +++ G+ G ++++ +
Sbjct: 260 PDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWDELKEL 319
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ + + Y +++D +G+ G + + +++E ++ S C L AY
Sbjct: 320 FDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQ 379
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ SVL+ ++ I + V N L++A+ E + V + ++ G PD VT
Sbjct: 380 QGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVT 439
Query: 311 YRTMVRAY 318
Y T+++A+
Sbjct: 440 YTTLMKAF 447
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q A ++F+ M +G + +++ AL+ + R G +A L M+ PD
Sbjct: 238 GKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEE-GMYPD 296
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +D+++ L M +G + + Y L+D YG+ F + + +
Sbjct: 297 PKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVA 356
Query: 123 KMLSEDCE--PDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +E+ + P ++ C L A+ G + + ++ GI+P++ N+L++++
Sbjct: 357 ALKAENLQLSPSIF---CVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFS 413
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
AG + AV ++++ S +VTY ++ AF R +++ L+
Sbjct: 414 TAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVRLLY 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ ELF M + G + + L+ YG+ G F A + +K + Q
Sbjct: 307 LGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALK-AENLQL 365
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +L + + ++ ++L M +GI PN V N LI+A+ A E +
Sbjct: 366 SPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVF 425
Query: 122 VKMLSEDCEPDVWTMNCTLRAF 143
+ PDV T ++AF
Sbjct: 426 QHIKDSGMSPDVVTYTTLMKAF 447
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 47/366 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + A LF+ EG + SF+A++SA+GR+G F A L M ++ P
Sbjct: 223 LGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSM-SSWGVVP 281
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +I + K +FD V +M G+ P+ +TYN+L+ M+ EM
Sbjct: 282 NVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMW-EMAQK 340
Query: 121 LVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L+ + C PDV+T N L +GQID + +E+ S + P++ T++ ++D Y
Sbjct: 341 LLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400
Query: 180 KA-----------------------------GHFEKMSAVMEY------MQKYHYSWTIV 204
KA G +EK+ + E M++ + +V
Sbjct: 401 KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN ++ +G+ G ++ LF M++ I P+ +T +++ Y ++ V R
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA------- 317
+ + +D VF++ ++D + +L M ++G KP+ VT+ +++ A
Sbjct: 521 KMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTL 580
Query: 318 -YSTNG 322
Y NG
Sbjct: 581 EYGVNG 586
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 48/309 (15%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPDVNTYSILIK 71
+ + M+ G + ++ +LLS G+++ A LL M + C PDV TY+ +
Sbjct: 305 KFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHR--CIVPDVFTYNTYLD 362
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTY------------------------------ 101
+ KA D + + +MS++ + PN VTY
Sbjct: 363 TLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCL 422
Query: 102 -----NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
NTL+ Y + E +M DV T N L +G G D + + +
Sbjct: 423 DRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLF 482
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
E+ ++ I P+ T++ ++D Y K F++ V + +V Y+ +ID +
Sbjct: 483 EEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKN 542
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRA--------YGHAGKPEKLGSVLRFIDNSD 268
G ++ L M + IKP+ VT S++ A YG G + + + +S
Sbjct: 543 GLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIE--QSSP 600
Query: 269 IMLDTVFFN 277
I++D F N
Sbjct: 601 IVIDGAFQN 609
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 130/342 (38%), Gaps = 91/342 (26%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-- 59
L K Q + A +F+ M + N +++A++ Y ++ L + A +L E MK C
Sbjct: 364 LCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLD 423
Query: 60 --------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
DV TY+ L+ K +D+V+ L
Sbjct: 424 RVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFE 483
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M + I PNT+TY+T+ID Y + +MF E + E DV + + +G
Sbjct: 484 EMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNG 543
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDS--------YGKAGHFEKMSAVMEYMQKYHY 199
+++ GI+P++ TFN ++D+ YG G + + +E
Sbjct: 544 LMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQ------ 597
Query: 200 SWTIVTYNIVID-------------------AFGRAGDLKQ----------MEYLFRLMR 230
+ IVID A +AG LK+ + +LF+ M
Sbjct: 598 -----SSPIVIDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMH 652
Query: 231 SERIKPSCVTL------CSLVRAYGHAGKPEKLGSVLRFIDN 266
IKP+ VT CSL +Y A L LR DN
Sbjct: 653 ELNIKPNVVTFSAILNACSLCNSYEDA---SLLLDTLRLFDN 691
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G G+I+ +E+ + G ++++F+ ++ ++G+ G F + M +
Sbjct: 223 LGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPN 282
Query: 203 IVTYNIVIDAFGRAGDLK--QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
++TYN +IDA G G++ + + M + + P +T SL+ G E +
Sbjct: 283 VITYNSIIDA-GAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKL 341
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS- 319
L +D+ I+ D +N +D + + V E M + P+ VTY M+ Y+
Sbjct: 342 LSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAK 401
Query: 320 TNGMKNHAKEFQDLVEKMDETCL 342
N +++ ++++ K+ CL
Sbjct: 402 ANLLEDALNLYEEM--KLRSVCL 422
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 7/327 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + ++A ++ ++ G S ALL+A GR+ F + +LL MK D QP
Sbjct: 280 LCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEM-DIQP 338
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMS---TQG--IRPNTVTYNTLIDAYGRAKMFAE 116
+V T+ ILI K D+ + M+ + G + P+ +TYNTLID + E
Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398
Query: 117 MELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ +M S+ C P+ T NC + + + I+ + +++ G+ P++ T N L+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D K G MQ VTY +I AF ++++ LF M
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P + +L+ AGK ++ VL + + D V FN L++ + R E +
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG 322
L+ M+ G KPD VTY T++ +S G
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTG 605
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 155/338 (45%), Gaps = 6/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK----NTP 57
LG+ ++ ++ + L M + N +F L++ + D+A + E M N
Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAE 116
+PDV TY+ LI K ++ L+ M +Q PNTVTYN LID Y +A M
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEA 434
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+M + P+V T+N + G+I+ + + + Q G++ + T+ L+
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ + EK + + M + S + Y +I +AG L + ++ M+ P
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSP 554
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
V+ L+ + K ++ +L+ ++N+ I D V +N L+ + + F+ ++
Sbjct: 555 DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLM 614
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+ M + G P VTY ++ AY NG + A K F+D+
Sbjct: 615 KKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 4/331 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A ELF M +G N + L+ + G + A M+ +
Sbjct: 425 GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK-GLK 483
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ TY+ LI++ +K L +M G P+ + Y TLI +A
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM PD+ + N + F ++D + ++ ++AGI+P T+N L+ + K
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS-ERIKPSCV 239
G F +M+ M K T+VTY +I A+ G+L + +FR M S ++ P+ V
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ + + + S++ + + +T FN + ++ +++ M
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ C PD +T + S G K F
Sbjct: 724 TEHACNPDYITMEILTEWLSAVGETAKLKSF 754
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 2/255 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA ELF M++ GC + + L+S ++G D+A +L MK PD+ ++++
Sbjct: 503 EKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA-GFSPDIVSFNV 561
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + D+ +L +M GI+P+ VTYNTLI + + F+ + KM+ E
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYGKAGHFEKM 187
P V T + A+ +G +D K + S + P+ +NIL++S + +
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++M+ M+ T+N + L + L M P +T+ L
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEW 741
Query: 248 YGHAGKPEKLGSVLR 262
G+ KL S ++
Sbjct: 742 LSAVGETAKLKSFVQ 756
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 138/343 (40%), Gaps = 48/343 (13%)
Query: 33 LLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLK------AFAFDKVQAL 85
L+ R G D A LL+ M + + P+ NT I+ + K A +++ L
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257
Query: 86 LSDMSTQGIRPNTV-----------------------------------TYNTLIDAYGR 110
+S + + PN++ + N L+ A GR
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317
Query: 111 AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAG--IQ 165
A+ F M L +M D +P+V T + ++D + +EK +S G ++
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGRAGDLKQMEY 224
P + T+N L+D K G E+ ++E M+ VTYN +ID + +A ++
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
LF M + + P+ VTL +LV G+ + + + V + L+ A+
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + + M + GC PD + Y T++ S G + A
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRA 540
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 117/317 (36%), Gaps = 51/317 (16%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
VN ++LI+ +A D+ + +++ R T N LID R + L
Sbjct: 159 VNAATLLIRCFGRAQMVDESFLVYNELCPS--RRLTHIRNILIDVLFRKGRVDDALHLLD 216
Query: 123 KMLSEDCE--PDVWTMNCTLRAFGNSGQI------DTMEKCYEKFQSAGIQPSINTFNIL 174
+ML E P+ T + A ++ + + KF + P+ L
Sbjct: 217 EMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQL 276
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ ++G ++ V+ + K + N ++ A GRA + K+M L M+ I
Sbjct: 277 ISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDI 336
Query: 235 KPSCVT-------LCSLVR---------------AYGHAGKP------------------ 254
+P+ VT LC R + G +P
Sbjct: 337 QPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 255 -EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
E LG V R M +TV +NCL+D Y + + + + M + G P+ VT T
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 314 MVRAYSTNGMKNHAKEF 330
+V +G N A EF
Sbjct: 457 LVDGMCKHGRINGAVEF 473
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K F K ++ S
Sbjct: 11 TYSTLITYFGKEGLFDDALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDFSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M PD + + L + +
Sbjct: 69 RLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQ 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + ++ T N+++D YG+ ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I D + ++ ++ +G++ + + ++ G + D++ Y+TM+ AY G+ HA
Sbjct: 249 GIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
F KA S+ +K + PD+ Y+ +I KA F + ++L+S+M GI P+TV+Y+
Sbjct: 60 FSKAISIFSRLKRS-GITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYS 118
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y + F E +M C ++ T N + +G +K + +
Sbjct: 119 TLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKX 178
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M + I+P +T +++ +G GK ++ + + + +S + +D + + ++ A
Sbjct: 239 NNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVA 298
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 299 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 334
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 151/341 (44%), Gaps = 7/341 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ T +++I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ + GI+P T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F +++ + + K ++ + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMINLFSKYKKYSNVVEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
G PD ++ AY ++ K E DE C
Sbjct: 383 GLGYFPDSNVIALVLNAYGK--LREFEKANDAYTEMQDEGC 421
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE--- 130
+ + P+ TY+TLI +G+ +F +ME L+++ + C+
Sbjct: 3 RALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSK 62
Query: 131 --------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD+ N + FG + + + AGI P +++ LL
Sbjct: 63 AISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLT 122
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y + F + +V M++ ++T N++ID +G+ K+ + LF MR I+P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEP 182
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ M RG +PD +TY T++ + G + A FQ L
Sbjct: 243 QEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKL 280
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + + M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 11/328 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY-----GRSGLFDKAFSLLEHMKNT 56
+GK KQ A F+ + G +T + AL++A+ R G F KA L E MK
Sbjct: 50 MGKAKQLRMAVWFFKEVKRNGHRPDTSLYNALITAHLQAEDKRIG-FAKALQLFEEMKTK 108
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
+C+PD+ TY+IL++ + +V+ +M + I PN ++YN +I AYG+A +
Sbjct: 109 ANCKPDLVTYNILLRGSAQVRDILQVERFFEEMEVEKIHPNLISYNGVIGAYGKAGDLVQ 168
Query: 117 MELTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG----IQPSINTF 171
ME TL M + + +PD T N + ++G ME+ ++ +A +P T+
Sbjct: 169 MEKTLFTMRILKHIKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTY 228
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
NIL+ SY + G KM M+ ++ + +Y I++ +G G + M F M
Sbjct: 229 NILMASYARLGEVGKMEWSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQ 288
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
++P TL +++RAY E+ +L T + L+ AY + + ++
Sbjct: 289 AGMQPQKSTLNAMLRAYCKHNCFEEAEELLNDALGWQTRPRTSSYLILLRAYAKERRSSD 348
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
++ + E M + G P T+ + ++S
Sbjct: 349 VEMLTERMAKVGIAPCAATFLEALESFS 376
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 23/316 (7%)
Query: 32 ALLSAYGRSGLFDKAFSL-LEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
ALL+A G+ + + M+ + D +S LI + KA ++
Sbjct: 8 ALLAALGKQSKWTLILEVTFRWMQEQKWYRLDNGFHSKLIVTMGKAKQLRMAVWFFKEVK 67
Query: 91 TQGIRPNTVTYNTLIDAYGRA-----------KMFAEMELTLVKMLSEDCEPDVWTMNCT 139
G RP+T YN LI A+ +A ++F EM+ +C+PD+ T N
Sbjct: 68 RNGHRPDTSLYNALITAHLQAEDKRIGFAKALQLFEEMKT------KANCKPDLVTYNIL 121
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY-H 198
LR I +E+ +E+ + I P++ ++N ++ +YGKAG +M + M+ H
Sbjct: 122 LRGSAQVRDILQVERFFEEMEVEKIHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILKH 181
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK----PSCVTLCSLVRAYGHAGKP 254
VT N +I+++G D +ME +F+ M + + K P T L+ +Y G+
Sbjct: 182 IKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTYNILMASYARLGEV 241
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
K+ ++ ++ L+ + L+ YG + A M M Q G +P K T M
Sbjct: 242 GKMEWSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQKSTLNAM 301
Query: 315 VRAYSTNGMKNHAKEF 330
+RAY + A+E
Sbjct: 302 LRAYCKHNCFEEAEEL 317
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +S+ L++ YG G M QP +T + ++++ K F++ + L
Sbjct: 259 NLRSYEILMTGYGEVGAIASMSECFYQMLQA-GMQPQKSTLNAMLRAYCKHNCFEEAEEL 317
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L+D RP T +Y L+ AY + + +++E+ +M P T L +F
Sbjct: 318 LNDALGWQTRPRTSSYLILLRAYAKERRSSDVEMLTERMAKVGIAPCAATFLEALESFSL 377
Query: 146 S 146
S
Sbjct: 378 S 378
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E AHEL + + G T S+ AL+ L D A L MK C PD
Sbjct: 742 CKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPD 800
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY +++ + K+ + + + +M +G + VTYNT+I ++KM E
Sbjct: 801 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 860
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+++SE P T L G I+ E +++ G +P+ +NILL+ Y AG
Sbjct: 861 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK+ + E M + + I +Y +VID G L F+ + ++P +T
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 980
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ G +G+ E+ S+ ++ I + +N L+ G+ AE + E + +
Sbjct: 981 LLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK 1040
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++R YS +G +A
Sbjct: 1041 GWKPNVFTYNALIRGYSVSGSPENA 1065
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 147/329 (44%), Gaps = 9/329 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G E++ A+ +G + N S+TA + A + G D+A + + MK P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQ 380
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEME 118
+Y+ LI LKA F++ L + M+ G PN T+ I+ +G++ K E
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M S+ PDV N L +G++ ++ + + ++ GI P T+ +++
Sbjct: 441 L----MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KA + ++ + M + + ++ N +ID +AG + +F ++ ++P+
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +L+ G GK +++ +L ++++ + + +N ++D + +L
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M GC PD +Y T++ G + A
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 147/357 (41%), Gaps = 37/357 (10%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M + G N ++ L+ +SG +A + + M P V TYS+L+ +
Sbjct: 159 LPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA-ADGVVPTVRTYSVLMLAFG 217
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + V LL +M +G+RPN +Y I G+A E L KM E C+PDV
Sbjct: 218 KRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVV 277
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T ++ ++G++ + + K +++ +P T+ LLD G +G +S + +
Sbjct: 278 TNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNAL 337
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY------ 248
+ Y+ +V+Y +DA + G + + +F M+ + I P + SL+ +
Sbjct: 338 KADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRF 397
Query: 249 ---------------------------GHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCL 279
H E L ++ R+ + + I+ D V N +
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ + K V ++ G PD +TY M++ S + A K F +++E
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 141/362 (38%), Gaps = 36/362 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + E+A+ + + M +EGC + + T L+ +G A + MK + D +
Sbjct: 250 VLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS-DQK 308
Query: 61 PDVNTYSILIKSC---------------LKAFAF--------------------DKVQAL 85
PD TY L+ C LKA + D+ +
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M +GI P +YN+LI + +A F M P+ +T + G
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+ K YE +S GI P + N +L K G V ++ S +T
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++I +A + + +F M R P + + SL+ AG+ + + +
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ +N L+ GR E+ +LE M P+ +TY T++ NG N
Sbjct: 549 EMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVN 608
Query: 326 HA 327
+A
Sbjct: 609 YA 610
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ELF++MV++G + + +S+T ++ G + S + + + +PD+ TY++
Sbjct: 923 EKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNL 981
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L +DM +GI PN TYN+LI G+A AE ++L++
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+P+V+T N +R + SG + Y + G +P+ +T+
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 2/335 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E L M G N S+T + G++G ++A+ +L M+ C+P
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEE-GCKP 274
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T ++LI+ A + + M +P+ VTY TL+D G + +
Sbjct: 275 DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIW 334
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ ++ +V + + A G++D +++ + GI P ++N L+ + KA
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKA 394
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + + +M + + T+ + I+ G++G+ + + LM+S+ I P V
Sbjct: 395 DRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAG 454
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ V + I D + + ++ + E + M +
Sbjct: 455 NAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
C PD + +++ G N A K F +L E
Sbjct: 515 NRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKE 549
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M++ GC+ N + LL+ Y +G +K L E M PD+ +Y++
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ-GMNPDIKSYTV 946
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + + ++ G+ P+ +TYN LI G++ E M +
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+++T N + G +G+ K YE+ + G +P++ T+N L+ Y +G E
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 189 A 189
A
Sbjct: 1067 A 1067
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 13/316 (4%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS----- 67
++F M + AN +F + A G G A L MK +N Y+
Sbjct: 122 QVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIV---LNAYTYNGLI 178
Query: 68 -ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+KS A D +A+ +D G+ P TY+ L+ A+G+ + + L +M +
Sbjct: 179 YFLVKSGFDREAMDVYKAMAAD----GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEA 234
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P+V++ +R G +G+++ + K + G +P + T +L+ AG
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
V M+ VTY ++D G +GD + + ++ ++++ + V+ + V
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A G+ ++ V + I+ +N L+ + + F + M G P
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTP 414
Query: 307 DKVTYRTMVRAYSTNG 322
+ T+ + + +G
Sbjct: 415 NGYTHVLFINYHGKSG 430
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 41/342 (11%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK----------- 81
+L ++ RSGL +A + PD + D ++ L++ LK +K
Sbjct: 666 ILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASS 725
Query: 82 ------------------------VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
L+ G+ T +YN LI +
Sbjct: 726 GLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIA 785
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M C+PD +T + L A G S +I+ M K E+ + G + + T+N ++
Sbjct: 786 EELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K+ ++ + + +S T TY ++D + G+++ E LF M +P+
Sbjct: 846 LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
C L+ Y AG EK+ + + + D + ++D A GRL +
Sbjct: 906 CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN---DGLS 962
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ + G +PD +TY ++ +G A + +EK
Sbjct: 963 YFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 136/354 (38%), Gaps = 42/354 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +F + G + ++T ++ ++ D+A + M C P
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN-RCAP 519
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI KA ++ + ++ + P TYNTL+ GR E+ L
Sbjct: 520 DVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLL 579
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M S P++ T N L +G+++ G P ++++N ++ K
Sbjct: 580 EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKE 639
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR---LMRSERIKPSC 238
G ++ + M+K + T ++ +F R+G +K+ + R L ++ S
Sbjct: 640 GRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSS 698
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV------------------ 280
V SL+ EK I +S ++LD +F + ++
Sbjct: 699 VH--SLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKK 756
Query: 281 ----------DAYGRLKCFAEMKGVLEV-------MQQRGCKPDKVTYRTMVRA 317
+Y L C + ++++ M++ GC PD+ TY ++ A
Sbjct: 757 FENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
Query: 110 RAKMFAEMELTLVKMLSEDCEPDVW----TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
R+ A+ E L LS +P V + N L G++ + + ++ Q I+
Sbjct: 74 RSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIK 133
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
++ TF + + G G + M++ TYN +I ++G ++ +
Sbjct: 134 ANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++ M ++ + P+ T L+ A+G E + +L ++ + + + + G+
Sbjct: 194 YKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQ 253
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
E +L M++ GCKPD VT +++ G AK+
Sbjct: 254 AGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKD 297
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 141/359 (39%), Gaps = 65/359 (18%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + +A ++F + + + ++ LL+ GR G + LLE M N+
Sbjct: 530 MLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-NSNSFP 588
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------- 112
P++ TY+ ++ K + +L M+ G P+ +YNT++ YG K
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM--YGLVKEGRLDEAF 646
Query: 113 -MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI--- 168
MF +M+ L PD T+ L +F SG M++ + +QP
Sbjct: 647 WMFCQMKKVLA--------PDYATVCTILPSFVRSG---LMKEALHTVREYILQPDSKVD 695
Query: 169 -NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
++ + L++ K EK ++ I + +++D DL +L
Sbjct: 696 RSSVHSLMEGILKRDGTEK---------SIEFAENIASSGLLLD------DL----FLSP 736
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS----VLRFIDNSDIML------------ 271
++R + LV+ + + G K GS + +D I +
Sbjct: 737 IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796
Query: 272 ---DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
D ++ ++DA G+ +M + E M +G K VTY T++ + M + A
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A L+ M +G N ++ +L+ G++G +A + E + +P
Sbjct: 986 LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL-AKGWKP 1044
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+V TY+ LI+ + + + A M G RPN+ TY L
Sbjct: 1045 NVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 5/333 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + +A +F M G N +FTAL+ Y G +K +L E M+ +
Sbjct: 47 GYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMR-IGGIE 105
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+IL+ + F++ + L +M +GI N V+YNTLI R + +
Sbjct: 106 PNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQL 165
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M E P V T N + +G +G++ + + AG QPS T+N L+ + +
Sbjct: 166 LELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCR 225
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + M++ + T VTY I+IDAF R D+ + +F M ++ T
Sbjct: 226 ARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRT 285
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KCFAEMKGVLEVM 299
LV A G + + + I + + V ++ L+ YGR + MK ++E M
Sbjct: 286 YGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIME-M 344
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+++G P+ +Y +R +G + A+ D
Sbjct: 345 RKKGFVPNSASYGLTIRILCNDGKCSEAEALID 377
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+G A +LL D DV + L+ ++ + Q + M G+ PN V
Sbjct: 15 AGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEV 74
Query: 100 TYNTLIDAY----GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
T+ LI Y R K A E KM EP+++T N + + +G+ +
Sbjct: 75 TFTALIHGYFIHGRREKGLALFE----KMRIGGIEPNLYTYNILVGEWCRTGEFERARLL 130
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+E+ + GI ++ ++N L+ + + + ++E M++ ++VT+N+++D +G+
Sbjct: 131 FEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGK 190
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AG + + MR +PS VT +L+ + A + + + V
Sbjct: 191 AGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVT 250
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ L+DA+ R + + M++ G + D TY +V A G MK+ K FQ +
Sbjct: 251 YTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIG 310
Query: 335 EK 336
EK
Sbjct: 311 EK 312
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 17/259 (6%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ + A +L + M EG + +F L+ YG++G A M+ QP
Sbjct: 155 RYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMR-MAGYQPSA 213
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAE 116
TY+ LI +A + SDM +G+ P VTY LIDA+ R +MFA
Sbjct: 214 VTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAG 273
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ME E DV T + A G + K ++ G+Q +++L+
Sbjct: 274 ME-------KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIY 326
Query: 177 SYGKAG-HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
YG+ G ++ M +ME M+K + +Y + I G + E L M ++
Sbjct: 327 GYGREGSSYKAMKLIME-MRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQ 385
Query: 236 PSCVTLCSLVRAYGHAGKP 254
S L+ A G P
Sbjct: 386 TSESVRQVLLNAKARQGSP 404
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 6/340 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + +A +L + + +G N S+T L+ AY + G +D+A + L M +
Sbjct: 353 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH-K 411
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY L+ + A D + M +G+ P+ YN L+ + +L
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML + PD + + F +G +D K +E G+ P I +N ++ Y K
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + A + M+K H + TY+ VID + + DL + +FR M + KP+ VT
Sbjct: 532 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT 591
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ + G + + R + ++ + V ++ L+ ++ + + E M
Sbjct: 592 YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML 651
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMK---NHAKEFQDLVEKM 337
C P+ VT+ +V +S NG + EFQ+ + M
Sbjct: 652 MNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSM 691
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 3/327 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+ +L + +GC N + L+ Y + G + A L +K
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK-LKGFL 271
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY +I K F + LL +M+++G+ N YNT+IDA + + T
Sbjct: 272 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 331
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M+ C+PD+ T N + G++ ++ E+ G+ P+ ++ L+ +Y K
Sbjct: 332 IEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCK 391
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +++ S + M + + +VTY ++ AG++ + M + P
Sbjct: 392 QGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGI 451
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ K +L + + ++ D + LVD + R E + + E+
Sbjct: 452 YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTI 511
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++G P V Y M++ Y GM A
Sbjct: 512 EKGMNPGIVGYNAMIKGYCKFGMMKDA 538
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 130/321 (40%), Gaps = 14/321 (4%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
S +L GR + K + + + D D + I++K K ++ + L+
Sbjct: 169 NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIE 228
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT---LVKMLSEDCEPDVWTMNCTLRAFG 144
D QG PN + YNTLID Y + +ME+ +++ + P V T + F
Sbjct: 229 DRWGQGCIPNIIFYNTLIDGYCKK---GDMEMANGLFIELKLKGFLPTVETYGAIINGFC 285
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G +++ + S G+ ++ +N ++D+ K GH K +E M + IV
Sbjct: 286 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 345
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +I R G + + + L + + P+ + L+ AY G ++ + L +
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL---EVMQQRGCKPDKVTYRTMVRAYSTN 321
D V + LV L E+ L E M +RG PD Y ++
Sbjct: 406 TERGHKPDLVTYGALVHG---LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK 462
Query: 322 GMKNHAKEFQDLVEKMDETCL 342
AK L E +D++ L
Sbjct: 463 FKLPAAKLL--LAEMLDQSVL 481
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVK 123
YS L+K ++ F +++ +L +M + + P + +I AY + + + +EL
Sbjct: 96 AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK---FQSAGIQPSIN-TFNILLDSYG 179
+ + PDV N L G+I+ K Y++ AG + N + I++
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC 215
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G E+ ++E I+ YN +ID + + GD++ LF ++ + P+
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVE 275
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ + G + + +L +++ + ++ +N ++DA + + +E M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ GCKPD VTY T++ +G + A +
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQL 366
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 7/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E L + M D G N +FT + GR+G D+A+ + M + C P
Sbjct: 237 LGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD-EGCGP 295
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
D+ TY++LI + A + + L M G +P+ V Y TL+D + G F E
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEF- 354
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M ++ PDV T + + D ++ + GI P+++T+N L+
Sbjct: 355 --WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG E ++ M+ T TYNI ID FG++G+ + F M+++ I P+
Sbjct: 413 LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
V + + + G+ + ++ + + + D+V +N ++ Y ++ E +L
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M + GC+PD + +++ + G + A + D ++ M
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++A+E+F+ M DEGC + ++T L+ A +G + A L MK +
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-K 329
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y L+ D + S M G P+ VT+ L+D +A+ F E T
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + P++ T N + +G+I+ K +S G+QP+ T+NI +D +GK
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G K E M+ IV N + + G L++ + +F +R + P VT
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G+ ++ ++L + + D + N L+D+ + E + + M+
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
P VTY T++ G A E F+ ++EK
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 1/318 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+++ MV EG + ++++AL+ A G+ + LL+ M++ +P+V T++I
Sbjct: 210 EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL-GLRPNVYTFTIC 268
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I+ +A D+ + M +G P+ VTY LIDA A + VKM +
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD L F + G +DT ++ + + ++ G P + TF IL+D KA F++ A
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M+K + TYN +I RAG ++ L M S ++P+ T + +G
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG 448
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G+ K + I+ + V N + + + E K + +++ G PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508
Query: 310 TYRTMVRAYSTNGMKNHA 327
TY M++ YS G + A
Sbjct: 509 TYNMMMKCYSKVGQVDEA 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 36/319 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +LF+ M + GC + +F LL+ +G+SG + F L + M + C+PD TY+I
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAITYNI 863
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I S K+ DK D+ + RP TY LID G AK+
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID--GLAKV--------------- 906
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
G+++ + +E+ G +P+ FNIL++ YGK G E
Sbjct: 907 ------------------GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + +Y I++D AG + + Y F ++S + P + ++
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + E+ ++ + N I+ D +N L+ G + K + E +Q G +PD
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068
Query: 309 VTYRTMVRAYSTNGMKNHA 327
TY ++R YS + HA
Sbjct: 1069 FTYNALIRGYSLSENPEHA 1087
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A+ + + P + +Y+ LI L+ +K L DM G P+ T+N L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+G++ E+ +M+S C+PD T N + + S +D + S+ +
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P+ T+ L+D K G E+ + E M Y +NI+I+ +G+ GD + L
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
F+ M +E I+P + LV AG+ ++ + ++ + D + +N +++ G+
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
+ E + M+ RG PD TY +++ GM AK +E LA
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY------EELQLAGL 1064
Query: 346 RPD 348
PD
Sbjct: 1065 EPD 1067
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A LF+ M D GC N F L++ YG+ G + A L + M N +P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN-EGIRP 961
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ +Y+IL+ A D+ +++ + G+ P+ + YN +I+ G+++ E
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PD++T N + G +G ++ ++ YE+ Q AG++P + T+N L+ Y +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081
Query: 182 GHFEKMSAVMEYM 194
+ E V + M
Sbjct: 1082 ENPEHAYTVYKNM 1094
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D++TY + K+ ++ +L+ M G N +YN LI ++ E
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+SE +P + T + + A G + + ++ + G++P++ TF I + G+A
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M +VTY ++IDA AG L+ + LF M++ KP V
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + G + ++ M D V F LVD + + F E +VM++
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRK 395
Query: 302 RGCKPDKVTYRTMV 315
+G P+ TY T++
Sbjct: 396 QGILPNLHTYNTLI 409
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + E A +L M G ++ + +G+SG KA E MK P
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMK-AKGIVP 470
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ + + S + + + + + + G+ P++VTYN ++ Y + E L
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ CEPDV +N + + +G++D + +++ + + P++ T+N LL GK
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + E M + S +++N ++D F + +++ +F M KP +T
Sbjct: 591 GRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650
Query: 242 CSLVRAYG 249
+++ YG
Sbjct: 651 NTVI--YG 656
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 153/359 (42%), Gaps = 41/359 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +KA ELF++M+++ C NT SF LL + ++ + A + M DC+P
Sbjct: 587 LGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM-TVMDCKP 645
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----------DAYGRA 111
DV TY+ +I +K + + + + P+ VT TL+ DA A
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIA 704
Query: 112 KMF-----------------------AEMELTLV----KMLSEDCEPDVWTMNCTLRAFG 144
+ F AEM+ ++ +L+ C D + + +R
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPL-VRVLC 763
Query: 145 NSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ + ++KF + GI P++ ++N L+ + + EK + + M+ +
Sbjct: 764 KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T+N+++ G++G + ++ L++ M S R KP +T ++ + + +K
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ +SD + L+D ++ E + E M GCKP+ + ++ Y G
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +KA + F +V +++ L+ + G ++A L E M + C+P
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY-GCKP 926
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ILI K + L M +GIRP+ +Y L+D A E
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ S +PD N + G S +++ Y + ++ GI P + T+N L+ + G A
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ + E +Q + TYN +I + + + + +++ M + P+ T
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Query: 242 CSL 244
L
Sbjct: 1107 AQL 1109
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%)
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+++ M +E Q I+ ++T+ + + G +M+ V+ M+K + +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I ++G + ++R M SE +KPS T +L+ A G E + +L+ +++
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + F + GR E + M GC PD VTY ++ A G +A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 328 KEF 330
KE
Sbjct: 317 KEL 319
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D+ T +A G + M K + AG + ++N L+ ++G + V
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M ++ TY+ ++ A G+ D + + L + M ++P+ T +R G A
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
GK ++ + R +D+ D V + L+DA K + M+ G KPD+V Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVE 335
T++ ++ G + KEF +E
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQME 359
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 159/334 (47%), Gaps = 10/334 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDC 59
GKC A +F+ M G + + ++ +L + F +A + E + K +P
Sbjct: 188 GKCNN---AEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-L 243
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD Y ++I KA +DK + + S M +G+ +TVTYN+L+ + E+
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSF---ETNYKEVSK 300
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M +PDV + ++A+G + + + +E+ AG++P+ +NILLD++
Sbjct: 301 IYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G E+ V + M++ + +Y ++ A+ A D++ E F+ ++ + +P+ V
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++++ Y A EK+ V + S I + ++DA GR K F G + M
Sbjct: 421 TYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEM 480
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ G PD+ ++ YST + AKE L
Sbjct: 481 ESCGVPPDQKAKNVLLSLYSTQDELDEAKELTGL 514
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+LI + K F+ + +LS +S G PN ++Y L+++YGR E +M S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L+ F + E+ +E + + ++P +++++ Y KAG++
Sbjct: 204 GPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+K V M + VTYN ++ + K++ ++ M+ I+P V+ L
Sbjct: 264 DKARKVFSSMVGKGVPQSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGIQPDVVSYALL 320
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ SV + ++ + +N L+DA+ + K V + M++
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD +Y TM+ AY A++F
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKF 406
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ A+G G + E+ G P++ ++ L++SYG+ G A+ MQ
Sbjct: 146 ITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP 205
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER---IKPSCVTLCSLVRAYGHAGKPEK 256
+ VTY I++ F K+ E +F + E+ +KP ++ Y AG +K
Sbjct: 206 EPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDK 265
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
V + + TV +N L+ K E+ + + MQ+ G +PD V+Y +++
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMSFETNYK---EVSKIYDQMQRSGIQPDVVSYALLIK 322
Query: 317 AYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
AY A+ ++ + +E A RP
Sbjct: 323 AY------GRARREEEALSVFEEMLDAGVRP 347
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G+F V+ + K S +++Y +++++GR G E +FR M+
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLK 287
S +PS VT +++ + K ++ V + S + D ++ ++ Y +
Sbjct: 202 SSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+ + + V M +G VTY +++ ++ TN KE + ++M + + +P
Sbjct: 262 NYDKARKVFSSMVGKGVPQSTVTYNSLM-SFETN-----YKEVSKIYDQMQRSGI---QP 312
Query: 348 D 348
D
Sbjct: 313 D 313
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 187 MSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+S ++E++ +Y W + + ++I A+G+ G+ E + ++ P+ ++ +L
Sbjct: 122 VSEILEWL-RYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTAL 180
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQ 301
+ +YG GK ++ R + +S V + ++ + F E + V E + ++
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
KPD+ Y M+ Y G + A++ F +V K
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGK 276
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 37/365 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--- 58
+GK K KA + + + G + ++ L+S Y +SG D A +L+ M PD
Sbjct: 162 IGKTK---KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVT 218
Query: 59 ----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
C PDV TY+ILI++ K + LL +M
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 278
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+G +P+ VTYN LI+ + E L M S C+P+V T N LR+ ++G+
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
EK G PS+ TFNIL++ + G + ++E M + + ++YN ++
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398
Query: 211 DAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
F + + + +EYL +M S P VT +L+ A GK + +L + +
Sbjct: 399 HGFCKEKKMDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-K 328
+ +N ++D ++ +L+ M+++G KPD +TY ++V S G + A K
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 329 EFQDL 333
F DL
Sbjct: 518 FFHDL 522
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M ++G + ++ L++ + G D+A L +M + CQP+V T++I+
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNII 327
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LLSDM +G P+ VT+N LI+ R + L KM C
Sbjct: 328 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + + S G P I T+N LL + K G +
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 447
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G ++ L MR + +KP +T SLV
Sbjct: 448 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 507
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ ++ I + + +N ++ + + L M + CKP +
Sbjct: 508 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 567
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY ++ + G+ AKE DL+ ++
Sbjct: 568 TYTILIEGIAYEGL---AKEALDLLNEL 592
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G + F LE M D PD+ + LI+ + K ++ + G P+
Sbjct: 126 RNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+TYN LI Y ++ E++ L + + PDV T N LR +SG++ + ++
Sbjct: 185 ITYNVLISGYCKS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
P + T+ IL+++ K + +++ M+ +VTYN++I+ + G
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L + M S +P+ +T ++R+ G+ +L + V FN
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L++ R +LE M GC P+ ++Y ++ + + A E+ D++
Sbjct: 362 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
LR +G+++ K E G P I L+ + + G +K + VME +++
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
++TYN++I + ++G +++ +++ + P VT +++R +GK ++
Sbjct: 181 VPDVITYNVLISGYCKSG---EIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
VL + D + + L++A + + +L+ M+ +G KPD VTY ++
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 320 TNGMKNHAKEF 330
G + A +F
Sbjct: 298 KEGRLDEAIKF 308
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A +L M +G + ++++L+S R G D+A ++ +P
Sbjct: 471 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL-GIRP 529
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
+ TY+ ++ K+ D+ L+ M ++ +P TY LI+
Sbjct: 530 NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 162/322 (50%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M +G S TAL+ AYGR+ + KA ++ M+ T +P
Sbjct: 152 GKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQ-TSGPEPS 210
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG---IRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++KS ++ + + +A+ D+ ++ +P+ ++ +I Y ++ +A+
Sbjct: 211 PITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARK 270
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M T N + G+ ++ ++ Y++ Q AG++P + ++++L+ +YG
Sbjct: 271 LFAQMSERGIPQSTVTFNSLMSFEGDYKEVSSI---YDQMQRAGLKPDVVSYSLLIKAYG 327
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ SAV E M T +YNI++DAF +G +++ + +F+ MR R++P
Sbjct: 328 KARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLC 387
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +++ AY +A + R I + + V + L+ Y +L ++ V E M
Sbjct: 388 SYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERM 447
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ +G +P++ + T++ + N
Sbjct: 448 RMQGVEPNQTIFTTIMDVHGRN 469
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M + G +T +F +L+S G + + S+ + M+ +PDV +YS+L
Sbjct: 267 QARKLFAQMSERGIPQSTVTFNSLMSF---EGDYKEVSSIYDQMQRA-GLKPDVVSYSLL 322
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK+ KA ++ A+ +M GIRP +YN L+DA+ + + E + M
Sbjct: 323 IKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRV 382
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EPD+ + L A+ N+ +D EK + + + G++P++ + L+ Y K + EK+
Sbjct: 383 EPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMR 442
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
V E M+ + ++D GR D F M + P
Sbjct: 443 VYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPP 489
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + K F + + +L M+ +G RP ++ L++AYGRAK + + E +M +
Sbjct: 146 MLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQTS 205
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG---IQPSINTFNILLDSYGKAGHF 184
EP T L++ + E +E S +P F++++ Y K+G +
Sbjct: 206 GPEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDY 265
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + M + + VT+N ++ GD K++ ++ M+ +KP V+ L
Sbjct: 266 AQARKLFAQMSERGIPQSTVTFNSLMSF---EGDYKEVSSIYDQMQRAGLKPDVVSYSLL 322
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ +V + ++ I +N L+DA+ E + V + M++
Sbjct: 323 IKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRV 382
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
+PD +Y TM+ AY + A++F
Sbjct: 383 EPDLCSYTTMLLAYVNASDMDGAEKF 408
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 187 MSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+S ++E+++ H+ ++ + + +++ A+G+ GD + E + + M + +P+ ++ +L+
Sbjct: 124 VSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALM 183
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQR 302
AYG A + K +V + S + + ++ + + E + + E + ++
Sbjct: 184 EAYGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRT 243
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
KPD+ + M+ Y +G
Sbjct: 244 FFKPDQKMFHMMIYMYKKSG 263
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 39/362 (10%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+ +L+ + + G DKA+S M + PDV
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR-GILPDV 236
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I + KA A DK +L+ M G+ P+ +TYN+++ Y + E TL K
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M S+ EP+V T + + +G+ K ++ G++P I T+ LL Y G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 184 FEKMSAVMEYM-----QKYHYSWTI------------------------------VTYNI 208
+M A+++ M Q H+ + I V Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VID ++G + F M E + P+ + SL+ K +K ++ + +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I L+T+FFN ++D++ + E + + ++M + G KPD +TY T++ G + A
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 329 EF 330
+
Sbjct: 537 KL 538
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
QP++A + M +G + N ++++L++ ++G +A + + M +PD+ TY
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATY 344
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L++ A ++ ALL M GI+P+ +N LI AY + + + L KM
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P+V + SG +D +E+ G+ P+I + L+ ++K
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDK 464
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M + +N +ID+ + G + + E LF LM +KP +T +L+
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 524
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AGK ++ +L + + + D V + L++ Y R+ + + + M G P
Sbjct: 525 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 584
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
+ +TY +++ AKE
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKEL 608
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 2/333 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F +M G + + ++ LL Y G + +LL+ M QP
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GIQP 374
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + ++ILI + K D+ + S M G+ PN V Y T+ID ++ + L
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E P++ + + D E+ + GI + FN ++DS+ K
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + I+TYN +ID AG + + L M S +KP VT
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y + + ++ + + +S + + + +N ++ + A K + + +
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
P V+TY+ILI C +A D A L ++ +G R + +T+ L+ K ++ M++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLD 176
L +M C PDV++ N L+ + + + + G P + ++N +L+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ K G +K + M +VTY+ +I A +A + + + M + P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
C+T S++ Y +G+P++ L+ + + + + V ++ L++ + E + +
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ M +RG +PD TYRT+++ Y+T G DL+ +
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 34/314 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + A F+ M+DEG N +T+L+ +DKA L+ M + C
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TY+ LI C A D+ LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTY TLI+ Y R + +M+S P++ T N L+ ++
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI+I A + G + + + LF + + P T + G E+L + ++
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 267 SDIMLDTVFFNCLV 280
+ D+ N +V
Sbjct: 720 NGCSADSRMLNSIV 733
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 6/333 (1%)
Query: 1 MLGKCKQPEKAHELFQAM---VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++G C + + F A+ V +G + +FT LL A ++
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157
Query: 58 DCQPDVNTYSILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
C PDV +Y+ L+K C + + + ++ L ++D G P+ V+YNT+++ + +
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ T +ML PDV T + + A + +D + G+ P T+N +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L Y +G ++ ++ M+ +VTY+ +++ + G + +F M +
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P T +L++ Y G ++ ++L + + I D FN L+ AY + + +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V M+Q G P+ V Y T++ +G + A
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 3/270 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + ++ L+ +G D+A LL M + +PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV-GVKPD 550
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY LI + D AL +M + G+ PN +TYN ++ + A + V
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 611 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 670
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + TY+++ + G L++++ LF M L
Sbjct: 671 RMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
S+VR G + G+ L ID L+
Sbjct: 731 SIVRKLLQRGDITRAGTYLFMIDEKHFSLE 760
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D+G N +++ LL+AY R+G + ++ +L MK + D YS L+
Sbjct: 140 ADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR-GIRLDTAGYSTLV 198
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + K L+ +M G+ + YN LID +G+ A+ KM +E +
Sbjct: 199 RLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVK 258
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R G + + Q G+ P F ++ G+ G ++++ +
Sbjct: 259 PDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKL 318
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ + Y +++D +G+ G + +++E ++ S C L AY
Sbjct: 319 FHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQ 378
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +VL+ ++ I + V N L++A+G E VL+ ++ G PD VT
Sbjct: 379 QGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVT 438
Query: 311 YRTMVRAY 318
Y T+++A+
Sbjct: 439 YTTLMKAF 446
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + +A L M G + + ALL + A LL M + +
Sbjct: 96 LARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVAR- 154
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY +L+ + +A + +L +M +GIR +T Y+TL+ Y M+ + +
Sbjct: 155 NRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLI 214
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++M E DV N + FG GQ+ K ++K + G++P I T+N L+ + +
Sbjct: 215 MEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRV 274
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ MQ+ + +I G G +++ LF MR+ +K S
Sbjct: 275 GNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVY 334
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
LV YG G + + ++ L F L +AY + + VL++M+
Sbjct: 335 AVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEA 394
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G +P+ V ++ A+ T G
Sbjct: 395 EGIEPNLVMLNLLINAFGTAG 415
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 3/290 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P Y+ LI++ +A + +ALL +M G+RP+ YN L++ +
Sbjct: 83 RPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADR 142
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M + + T L A+ +G+++ + + GI+ ++ L+ Y
Sbjct: 143 LLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYR 202
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++K + ++ MQ+ + YN +ID FG+ G L +F M +E +KP
Sbjct: 203 DNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDIT 262
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+R + G ++ + + D F ++ G + E+K + M
Sbjct: 263 TWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGM 322
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ RG K Y +V Y G H ++ D V + L + F
Sbjct: 323 RNRGLKESGAVYAVLVDIYGQYG---HFRDAHDCVAALKAENLQLSPSIF 369
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q A ++F M EG + ++ +L+ + R G +A M+ PD
Sbjct: 237 GKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQE-EGMYPD 295
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +D+++ L M +G++ + Y L+D YG+ F + +
Sbjct: 296 PKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVA 355
Query: 123 KMLSEDCE--PDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +E+ + P ++ C L A+ G + + ++ GI+P++ N+L++++G
Sbjct: 356 ALKAENLQLSPSIF---CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFG 412
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
AG + AV+++++ S +VTY ++ AF RA ++ LF
Sbjct: 413 TAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKACPLF 459
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ +LF M + G + + L+ YG+ G F A + +K + Q
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALK-AENLQL 364
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +L + + ++ +L M +GI PN V N LI+A+G A E L
Sbjct: 365 SPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVL 424
Query: 122 VKMLSEDCEPDVWTMNCTLRAF 143
+ PDV T ++AF
Sbjct: 425 QHIKDSGMSPDVVTYTTLMKAF 446
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +KN+ PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 60 YSKAISIFSRLKNS-GYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYS 118
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 119 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 238
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 239 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 298
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 299 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 334
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DQVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + +
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K +A + V + M+
Sbjct: 323 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIAIVLNAY 400
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 335 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYANVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L F + V MQ+
Sbjct: 379 DKMRGLGY------------FPDSNVIAI-------VLNAYGKLHEFDKANDVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 161/330 (48%), Gaps = 13/330 (3%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFA 78
+ G +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K +
Sbjct: 2 ERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLYD 59
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ K ++ S + GI P+ V YN++I+ +G+AK+F E + +M PD + +
Sbjct: 60 YSKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYST 119
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L + + + + + + + T NI++D YG+ ++ + M+K
Sbjct: 120 LLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMG 179
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+V+YN ++ +G A + +LFRLM+ + I+ + VT +++ YG + EK
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++++ + + I + + ++ ++ +G++ + + ++ G + D V Y+TM+ AY
Sbjct: 240 NLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G+ HAK +KRPD
Sbjct: 300 ERAGLVAHAKRL----------LHELKRPD 319
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 152/342 (44%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ S GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F +VD + + K + + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G PD ++ AY + K +E DE C+
Sbjct: 383 GLGYFPDSNVIALVLNAYGK--LHEFDKANDVYLEMQDEGCV 422
>gi|449451631|ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 149/312 (47%), Gaps = 4/312 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
++GK Q A LF M + GC +T + AL++A+ ++ K S E MK
Sbjct: 136 IMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGM 195
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C+P++ TY+IL ++ +A D+V L D+ + + TYN ++DAYG+ E
Sbjct: 196 ERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKE 255
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
MEL L +M S +PD+ + N + ++G D ME+ ++ + +P++ TFN ++
Sbjct: 256 MELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMIT 315
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+YGKA EK V M+ Y + VT +I +G + + +F M + +
Sbjct: 316 NYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEV 375
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
TL +++ Y G P + + N + D+ + L AY + ++ +L
Sbjct: 376 RVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLL 435
Query: 297 EVMQQRGCKPDK 308
+ M + G P+K
Sbjct: 436 KNMDKAGIIPNK 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 15/272 (5%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS LI K L S+M G RP+T YN LI A+ +K A+ L
Sbjct: 126 DNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK---AL 182
Query: 122 VKMLS--------EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
VK+LS E C+P++ T N RAF + ++D + ++ + + I T+N
Sbjct: 183 VKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNG 242
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++D+YGK G+ ++M ++ M+ I+++N++ID++G+ +ME +F+ + +
Sbjct: 243 VMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 302
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC--LVDAYGRLKCFAE 291
+P+ T S++ YG A EK V R + D+ D + C L+ YG C ++
Sbjct: 303 ERPTLPTFNSMITNYGKARLREKAEEVFRKM--KDMGYDPSYVTCESLIMMYGHCDCVSK 360
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + M G + T M+ Y NG+
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 392
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 163/359 (45%), Gaps = 39/359 (10%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+T +++ + + G DKA+S M + PDV
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-GILPDV 231
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ +I + KA A DK +L+ M G+ P+ +TYN+++ Y + E L K
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M S+ EPDV T + + +G+ K ++ G++P I T+ LL Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT--- 240
+M +++ M + ++I+I A+ + G + Q +F MR + + P+ VT
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 241 ----LC----------------------------SLVRAYGHAGKPEKLGSVLRFIDNSD 268
LC SL+ K E+ ++ + +
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I L+T+FFN ++D++ + E + + E+M + G KP+ +TY T++ Y G + A
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 5/332 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--TPDCQPDVNTYSILIK 71
+ + M + GC N S+ LL +A LL M + PDV +Y+ +I
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K DK + +M +GI P+ VTYN++I A +A+ + L M+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N L + +SGQ +K +S G++P + T+++L+D K G + +
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M K I TY ++ + G L +M L LM I P L+ AY
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
GK ++ V + + + V + ++ + + E M G P + Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ T A+E ++E +D CL
Sbjct: 445 NSLIHGLCTCNKWERAEEL--ILEMLDRGICL 474
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 144/324 (44%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
QP++A + M +G + + +++ L+ ++G +A + + M +P++ TY
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTY 339
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L++ A ++ LL M GI P+ ++ LI AY + + L KM
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+ T + SG+++ +E+ G+ P +N L+ +E+
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M + +N +ID+ + G + + E LF LM +KP+ +T +L+
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLIN 519
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK ++ +L + + + +TV ++ L++ Y ++ + + + M+ G P
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
D +TY +++ AKE
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKEL 603
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M PD
Sbjct: 315 GRCME---ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPD 370
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + K D+ + S M QG+ PN VTY +I ++ + L
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + E+ + GI + FN ++DS+ K G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + E M + ++TYN +I+ + AG + + L M S +KP+ VT
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + + +++S + D + +N ++ + + A K + + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + PD+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI C +A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAG 182
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K + M +VTYN +I A +A + + + M + P C+T
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S++ Y +G+P++ L+ + + + D V ++ L+D + E + + + M +R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 331 GLKPEITTYGTLLQGYATKG 350
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 21/342 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F M +G + N ++ A++ +SG + A E M + P Y+
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID-EGLSPGNIVYNS 446
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +++ + L+ +M +GI NT+ +N++ID++ + E E M+
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V T N + + +G++D K S G++P+ T++ L++ Y K E
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL-CSLVRA 247
+ + M+ S I+TYNI++ + + L+ RI S + S
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY-----VRITESGTQIELSTYNI 621
Query: 248 YGHAGKPEKL-GSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
H KL L+ N D+ L+ FN ++DA ++ E K + G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
P+ TYR M G L+E++D+ L+M+
Sbjct: 682 LVPNYWTYRLMAENIIGQG----------LLEELDQLFLSME 713
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF+ MV G N ++ L++ Y +G D+A LL M + +P+
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPN 545
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + ++ T N L + D + ++ ++ TFNI++D+ K G
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + TY ++ + G L++++ LF M L
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR G+ + G+ L ID L+ + +D
Sbjct: 726 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 14/345 (4%)
Query: 1 MLGKCKQPEKAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M C + + E L QAM+++GC+ +++ ALL AY ++ +++A + ++
Sbjct: 319 MQWACARARNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEK- 377
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD T+S L+ +C A +K A++ M PN V++ L+ AY + + +
Sbjct: 378 GFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKT 437
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E ML+ C P+ N L A+ Q + EK + G++ + ++ + +
Sbjct: 438 EEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISA 497
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
KAG ++ + M++ IVTY+ +I A+G G + E +F+ M E I+P
Sbjct: 498 LAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPD 557
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNS----DIMLDTVFFNCLVDAYGRLKCFAEMK 293
C+L+RAY K +L V+ F D+ I D + + A +
Sbjct: 558 SKACCALLRAY---AKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAA 614
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+E M+ GC PD + Y T++ Y +G + A E +++KMD
Sbjct: 615 DYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAME---ILKKMD 656
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 156/328 (47%), Gaps = 1/328 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG ++ +A +LF+ M +G + +F AL+ A GR G D A L E MK
Sbjct: 217 VLGYGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKEL-GLA 275
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+ L+ + A + Q+ ++ M G + + A RA+ E
Sbjct: 276 PDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGL 335
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M+ + CEP + N L A+ + + + Q G P T++ LL +
Sbjct: 336 LQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACAN 395
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG EK AVME M++ +++ +V++ ++ A+ + G+ ++ E +F M + P+ V
Sbjct: 396 AGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVA 455
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ AY + +++ + + + LD V ++ + A + + + + M+
Sbjct: 456 WNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMK 515
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
Q GC+P+ VTY ++++AY G+ N A+
Sbjct: 516 QSGCQPNIVTYSSLIKAYGDVGLWNKAE 543
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 116/292 (39%), Gaps = 35/292 (11%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + ++++ + +D + + + PN TLI G + E
Sbjct: 172 DVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLF 231
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + E ++T N + A G G DT + +E+ + G+ P TF L+ + A
Sbjct: 232 RWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAA 291
Query: 182 GHFEKMSAVMEYMQKYHYSWTI-----------------------------------VTY 206
G ++ + + MQ +S+ I Y
Sbjct: 292 GKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPRLENY 351
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N ++ A+ + + ++ ++ + P +T SL+ A +AG+ EK +V+ +
Sbjct: 352 NALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKE 411
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++ + V + L+ AY + + + + + M GC P++V + +++ AY
Sbjct: 412 NNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAY 463
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-PEKLGSVL 261
+ + N+V+ G+ + +FR RS ++P+ +L+ G+ + PE L +
Sbjct: 173 VRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEAL-KLF 231
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
R+++ I FN L+ A GR + E M++ G PD +T+R +V A +
Sbjct: 232 RWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAA 291
Query: 322 GMKNHAKEFQDLVE 335
G A+ F +L++
Sbjct: 292 GKWKAAQSFINLMQ 305
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+R + + N ++ G+ + + S EP+ + G ++
Sbjct: 168 GLRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEA 227
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + + GI+ I TFN L+ + G+ G + + E M++ + +T+ ++ A
Sbjct: 228 LKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSA 287
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA-GKPEKLGSVLRFIDNS-DIM 270
AG K + LM++ + + A A E LG + I+ +
Sbjct: 288 TTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPR 347
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L+ +N L+ AY + + E + +Q++G PD +T+ +++ A + G A++
Sbjct: 348 LEN--YNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAG---QAEKA 402
Query: 331 QDLVEKMDE 339
++EKM E
Sbjct: 403 VAVMEKMKE 411
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 7/313 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M + C NT ++ +L+ A+ R+G + A ++++ M+ P TY+
Sbjct: 170 DQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAA-IPPSRTTYNN 228
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +C A + K L M+ G+ P+ +T+N ++ A+ +++ M S
Sbjct: 229 VINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSK 288
Query: 129 CEPDVWTMNCTLRAFGNSG----QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD TMN + G I+ E+ + P + T+ ++ SY G
Sbjct: 289 VAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTC--HPDVVTYTSIMYSYSVCGQA 346
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E AV + M IV+YN ++ A+ G + F+L++ ++P V+ SL
Sbjct: 347 ENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSL 406
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AYG + +PEK V + + + V +N L+DAYG E +L M+Q G
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGI 466
Query: 305 KPDKVTYRTMVRA 317
+PD ++ T++ A
Sbjct: 467 QPDVISISTLLTA 479
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E+F M C N S+ AL+ AYG +G+ +A SLL M+ QPD
Sbjct: 411 GRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD-GIQPD 469
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V + S L+ +C + K+ +L+ ++GI+ NTV YN+ I +Y + + +
Sbjct: 470 VISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYT 529
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + + +PD T N + G+ K +E I + ++ ++ SY K G
Sbjct: 530 SMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQG 589
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ M++ ++TY +I A+ G ++ LF+ M + +P +
Sbjct: 590 KLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCS 649
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
SL+ A G+PE++ ++ F+ I L+
Sbjct: 650 SLMEALNKGGQPERVLQLIEFMKQKKIQLN 679
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 1/318 (0%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E +F MV EG N S+ ALL AY G+ +A + +K +PD+
Sbjct: 343 CGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQN-GLRPDIV 401
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + ++ +K + + ++M +PN V+YN LIDAYG A M E L +M
Sbjct: 402 SYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ +PDV +++ L A G Q+ ++ +S GIQ + +N + SY G +
Sbjct: 462 EQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDY 521
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+K + M+ + VTYNI+I + G + F M I + S+
Sbjct: 522 KKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSV 581
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +Y GK + S + + D + + L+ AY + + + M+ G
Sbjct: 582 ICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGT 641
Query: 305 KPDKVTYRTMVRAYSTNG 322
+PD + +++ A + G
Sbjct: 642 QPDAIVCSSLMEALNKGG 659
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+P+ +TY+ LI + +A +
Sbjct: 151 ARNDIYGMMIRLHARHNKVDQARGLFFEMQEW-RCKPNTDTYNSLIHAHARAGQWCWAIN 209
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ DM I P+ TYN +I+A G A + + KM PD+ T N L AF
Sbjct: 210 IMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFK 269
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW--T 202
N Q +E +S+ + P T NI++ K G + + + M++ +
Sbjct: 270 NGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPD 329
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTY ++ ++ G + + +F +M +E ++P+ V+ +L+ AY G + +
Sbjct: 330 VVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFK 389
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + D V + L++AYGR + + V M++ CKP+KV+Y ++ AY + G
Sbjct: 390 LLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAG 449
Query: 323 MKNHAKEFQDLVEKMDE 339
M KE L+ +M++
Sbjct: 450 M---LKEAISLLHEMEQ 463
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 157/368 (42%), Gaps = 39/368 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDCQPDVNT 65
Q KA F+ M +T + ++ + GL+ +A L M+ C PDV T
Sbjct: 273 QYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVT 332
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ S + +A+ M +G+RPN V+YN L+ AY M E T +
Sbjct: 333 YTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLK 392
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
PD+ + L A+G S Q + + + + + +P+ ++N L+D+YG AG +
Sbjct: 393 QNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLK 452
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA----------------------------- 216
+ +++ M++ +++ + ++ A GR
Sbjct: 453 EAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGI 512
Query: 217 ------GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
GD K+ L+ MR+ +KP VT L+ G+ + + + +I
Sbjct: 513 GSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIH 572
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L ++ ++ +Y + E M++ GC PD +TY T+++AYS +G A
Sbjct: 573 LTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRA--- 629
Query: 331 QDLVEKMD 338
DL ++M+
Sbjct: 630 WDLFKEME 637
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ SG A + MKN + + Y ++I+ + D+ + L
Sbjct: 118 RNFPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFF 177
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +PNT TYN+LI A+ RA + + M P T N + A G +G
Sbjct: 178 EMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ +K G+ P + T NI+L ++ + K A E M+ + T N
Sbjct: 238 NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMN 297
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERI--KPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + G + LF MR R P VT S++ +Y G+ E +V +
Sbjct: 298 IVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMV 357
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + V +N L+ AY E ++++Q G +PD V+Y +++ AY +
Sbjct: 358 AEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPE 417
Query: 326 HAKE 329
A+E
Sbjct: 418 KARE 421
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A F +M + GC + ++T L+ AY G + +A+ L + M+N QPD S L
Sbjct: 593 EAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENN-GTQPDAIVCSSL 651
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+++ K ++V L+ M + I+ N Y +I + + + + + S
Sbjct: 652 MEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLS 711
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
T+N L G G+ ++M K + K ++ ++T+ ILL + G + K
Sbjct: 712 SISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVE 771
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGR 215
V+++M+ T+ Y V+ R
Sbjct: 772 VLQWMEDAGVCPTLYMYQSVLPYIWR 797
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 72/173 (41%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ + +++ + + ++ + MQ++ TYN +I A RAG +
Sbjct: 154 DIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDD 213
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M+ I PS T +++ A G AG +K + + + + + D + N ++ A+
Sbjct: 214 MQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQ 273
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+++ E+M+ PD T ++ G+ A E + + + TC
Sbjct: 274 YSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTC 326
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M PD + + L + +
Sbjct: 69 RLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQ 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + + ++ ++ +G++ + + ++ G + D V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M + G +T S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 VDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D E +V T N + +G + + + ++ + GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++D + + K + + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVISLVLNAY 400
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 36/278 (12%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE--- 130
+ + P+ TY+TLI +G+ +F +ME L+++ + C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 131 --------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD+ N + FG + + + AG+ P +++ LL
Sbjct: 63 AISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLT 122
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y + F + +V M++ + T NI+ID +G+ K+ + LF MR I+P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEP 182
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V+ +L+R YG A + + R + DI + V +N ++ YG+ + ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ M RG +P+ +TY T++ + G + A FQ L
Sbjct: 243 QEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF +M G + N S+ LL YG + LF +A L M+ D + +
Sbjct: 160 GQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KDIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN +TY+T+I +G+ +
Sbjct: 219 VVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + P+ V +
Sbjct: 335 RIEEATWV---------------FRQAIDA-GEVKDITVFERMIDLFSKYKKYPNVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + MQ
Sbjct: 379 EKMRGLGY------------FPDSNVISL-------VLNAYGKLHEFDXANDMYMDMQDE 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + FG G D +K + + + ++ L++ K + K ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+++ + +V YN +I+ FG+A ++ L MR + P V+ +L+ Y
Sbjct: 67 FSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVE 126
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K + SV + ++D N ++D YG+L E + M++ G +P+ V+
Sbjct: 127 NQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y T++R Y + A L+++ D
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKD 214
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 161/359 (44%), Gaps = 39/359 (10%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+T +++ + + G DKA+S M + PDV
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-GILPDV 231
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ +I + KA A DK +L+ M G+ P+ +TYN+++ Y + E L K
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M S+ EPDV T + + +G+ K ++ G++P I T+ LL Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 184 FEKMSAVMEYMQKY-----HYSWTI------------------------------VTYNI 208
+M +++ M + HY ++I VTY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VI ++G ++ F M E + P + SL+ K E+ ++ + +
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I L+T+FFN ++D++ + E + + E+M + G KP+ +TY T++ Y G + A
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 5/332 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--TPDCQPDVNTYSILIK 71
+ + M + GC N S+ LL +A LL M + PDV +Y+ +I
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K DK + +M +GI P+ VTYN++I A +A+ + L M+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N L + +SGQ +K +S G++P + T+++L+D K G + +
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M K I TY ++ + G L +M L LM I P L+ AY +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
GK ++ V + + + V + ++ + + E M G P + Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+++ T A+E ++E +D CL
Sbjct: 445 NSLIHGLCTCNKWERAEEL--ILEMLDRGICL 474
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 143/324 (44%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
QP++A + M +G + + +++ L+ ++G +A + + M +P++ TY
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTY 339
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L++ A ++ LL M GI P+ ++ LI AY + L KM
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+ T + SG+++ +E+ G+ P +N L+ +E+
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M + +N +ID+ + G + + E LF LM +KP+ +T +L+
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLIN 519
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK ++ +L + + + +TV ++ L++ Y ++ + + + M+ G P
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
D +TY +++ AKE
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKEL 603
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M PD
Sbjct: 315 GRCME---ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPD 370
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SILI + D+ + S M QG+ PN VTY +I ++ + L
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + E+ + GI + FN ++DS+ K G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + E M + ++TYN +I+ + AG + + L M S +KP+ VT
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + E + + +++S + D + +N ++ + + A K + + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + PD+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI C +A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAG 182
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K + M +VTYN +I A +A + + + M + P C+T
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S++ Y +G+P++ L+ + + + D V ++ L+D + E + + + M +R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KP+ TY T+++ Y+T G
Sbjct: 331 GLKPEITTYGTLLQGYATKG 350
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 21/342 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F M +G + N ++ A++ +SG + A E M + P Y+
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID-EGLSPGNIVYNS 446
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +++ + L+ +M +GI NT+ +N++ID++ + E E M+
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V T N + + +G++D K S G++P+ T++ L++ Y K E
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL-CSLVRA 247
+ + M+ S I+TYNI++ + + L+ RI S + S
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY-----VRITESGTQIELSTYNI 621
Query: 248 YGHAGKPEKL-GSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
H KL L+ N D+ L+ FN ++DA ++ E K + G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
P+ TYR M G L+E++D+ L+M+
Sbjct: 682 LVPNYWTYRLMAENIIGQG----------LLEELDQLFLSME 713
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF+ MV G N ++ L++ Y +G D+A LL M + +P+
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPN 545
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS LI K + L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + ++ T N L + D + ++ ++ TFNI++D+ K G
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + TY ++ + G L++++ LF M L
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR G+ + G+ L ID L+ + +D
Sbjct: 726 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 38/328 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKN--------------------------------- 55
+++ L++ +G+ GLFD A S L+ M+
Sbjct: 14 TYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIFSRL 73
Query: 56 -TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+TL+ Y K F
Sbjct: 74 KRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 133
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E +M C D+ T N + +G G +K + + GI+PS+ ++N L
Sbjct: 134 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTL 193
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L YG A F + + MQ+ + +VTYN ++ +G+ + ++ L + M+S I
Sbjct: 194 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 253
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ +T +++ +G GK ++ + + + +S + +D + F ++ AY R A K
Sbjct: 254 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 313
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L ++ +PD + T + + G
Sbjct: 314 LLHELK----RPDNIPRDTAIHILAGAG 337
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 91 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI P+ V+YNTL+ YG A++F E
Sbjct: 150 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 210 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 270 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + +
Sbjct: 326 RDTAIHILAGAGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXR 385
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 386 GLGYFPDSDVIAIVLNAY 403
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDC 129
+M + + P+ TY+TLI +G+ +F +ME L+++ + C
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLC 61
Query: 130 E-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ PD+ N + FG + + ++AG+ P+ +++
Sbjct: 62 DYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 121
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I+PS V+ +L+R YG A + + R + +I + V +N ++ YG+ +
Sbjct: 182 GIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 241
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 283
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + + S+ LL YG + LF +A L M+ + + +
Sbjct: 163 GQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 221
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 222 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 281
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 282 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 337
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 338 RIEEATYV---------------FRQAIDA-GXVKDITVFERMIHLLSKYKKYSNVVEVF 381
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 382 DKXRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 422
Query: 303 GC 304
GC
Sbjct: 423 GC 424
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 39/362 (10%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+ +L+ + + G DKA+S M + PDV
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR-GILPDV 236
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I + KA A DK +L+ M G+ P+ +TYN+++ Y + E TL K
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M S+ EP+V T + + +G+ K ++ G++P I T+ LL Y G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 184 FEKMSAVMEYM-----QKYHYSWTI------------------------------VTYNI 208
+M A+++ M Q H+ + I V Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VID ++G + F M E + P+ + SL+ K +K ++ + +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
I L+T+FFN ++D++ + E + + ++M + G KPD +TY T++ G + A
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 329 EF 330
+
Sbjct: 537 KL 538
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
QP++A + M +G + N ++++L++ ++G +A + + M +PD+ TY
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATY 344
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L++ A ++ ALL M GI+P+ +N LI AY + + + L KM
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
P+V + SG +D +E+ G+ P+I + L+ ++K
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDK 464
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M + +N +ID+ + G + + E LF LM +KP +T +L+
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 524
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AGK ++ +L + + + D V + L++ Y R+ + + + M G P
Sbjct: 525 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 584
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
+ +TY +++ AKE
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKEL 608
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 2/333 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F +M G + + ++ LL Y G + +LL+ M QP
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GIQP 374
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + ++ILI + K D+ + S M G+ PN V Y T+ID ++ + L
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E P++ + + D E+ + GI + FN ++DS+ K
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + I+TYN +ID AG + + L M S +KP VT
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y + + ++ + + +S + + + +N ++ + A K + + +
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
P V+TY+ILI C +A D A L ++ +G R + +T+ L+ K ++ M++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLD 176
L +M C PDV++ N L+ + + + + G P + ++N +L+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ K G +K + M +VTY+ +I A +A + + + M + P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
C+T S++ Y +G+P++ L+ + + + + V ++ L++ + E + +
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ M +RG +PD TYRT+++ Y+T G DL+ +
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 34/314 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC- 59
+L K + A F+ M+DEG N +T+L+ +DKA L+ M + C
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479
Query: 60 ---------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+PD+ TY+ LI C A D+ LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ M + G++P+ VTY TLI+ Y R + +M+S P++ T N L+ ++
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ Y +G Q ++T+NI+L K ++ + + + T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI+I A + G + + + LF + + P T + G E+L + ++
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 267 SDIMLDTVFFNCLV 280
+ D+ N +V
Sbjct: 720 NGCSADSRMLNSIV 733
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 6/333 (1%)
Query: 1 MLGKCKQPEKAHELFQAM---VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++G C + + F A+ V +G + +FT LL A ++
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157
Query: 58 DCQPDVNTYSILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
C PDV +Y+ L+K C + + + ++ L ++D G P+ V+YNT+++ + +
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ T +ML PDV T + + A + +D + G+ P T+N +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L Y +G ++ ++ M+ +VTY+ +++ + G + +F M +
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P T +L++ Y G ++ ++L + + I D FN L+ AY + + +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V M+Q G P+ V Y T++ +G + A
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 3/270 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + ++ L+ +G D+A LL M + +PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV-GVKPD 550
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY LI + D AL +M + G+ PN +TYN ++ + A + V
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 611 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 670
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + TY+++ + G L++++ LF M L
Sbjct: 671 RMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
S+VR G + G+ L ID L+
Sbjct: 731 SIVRKLLQRGDITRAGTYLFMIDEKHFSLE 760
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 1/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A LFQ ++ G +T ++T+L+ + FD A L M N C P
Sbjct: 20 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPP 78
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+++I + K ++ L+ M G P+ VTYNT++D ++ E L
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 138
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C P+ + N + +ID + + + ++ I P ++ IL+D KA
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + + VTYN+VI A L + LF+ MRS+ +PS T
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ A+ GK ++ +L+ + + + D V ++ L+ + + + +LE M +
Sbjct: 259 NILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
R CKP VT T++ G A+E D
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 141/337 (41%), Gaps = 4/337 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK E+A LF M GC N +S ++ + D+A + M+ D
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME-AKD 180
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD +Y ILI KA ++ L M GI P+ VTYN +I A E
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M S+ C P +T N + A G++D + ++ G P + T++ L+
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++E M K T+VT N +I +AG +K+ + M S P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +LV + AG+ E+ +L + + + V + LV + E GV
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
M+ GC P+ TY ++ + + G + K F ++V
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ELF++M +GC + +F L+ A+ + G D+AF LL+ M + PDV TYS
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV-PDVVTYST 295
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI D + LL DM + +P VT NTLI +A E L M+S
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T N + +GQ + + + G+ P++ T+ L+ KA +
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M+ + + TY +I F AG + LF M I P V +L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 249 GHAGKPEKLGSVLR 262
+G+ + +LR
Sbjct: 476 CKSGRSARALEILR 489
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 124/310 (40%), Gaps = 36/310 (11%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M + ++ S+ L+ ++G + A +L + + ++ P Y+ LI A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS-GVTPSTVAYTSLIHGLCMAN 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+FD + L +DM+ +G P+ VTYN +IDA + M E + KM+ + PDV T N
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ S +++ + + + G P+ + N ++ + ++ V M+
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+Y I+ID +AG L + LF+ M I PS VT
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT----------------- 222
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+N ++ E + + M+ +GC+P + T+ ++ A
Sbjct: 223 ------------------YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 318 YSTNGMKNHA 327
+ G + A
Sbjct: 265 HCKRGKLDEA 274
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 41/140 (29%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
SW+ Y I+ID +AG L LF+ + + PS V SL+
Sbjct: 10 SWS---YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL----------- 55
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
C+ ++ F + + + M +RGC P VTY M+ A
Sbjct: 56 ------------------CMANS------FDDARELFADMNRRGCPPSPVTYNVMIDASC 91
Query: 320 TNGMKNHAKEFQDLVEKMDE 339
GM +E DL++KM E
Sbjct: 92 KRGM---LEEACDLIKKMIE 108
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 150/330 (45%), Gaps = 1/330 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F MV EG N ++ +LL AY G+ +A ++ +K +PD+ +Y
Sbjct: 203 QVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN-GLRPDIVSY 261
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ + ++ +K + + + M +PN V+YN LIDAYG A M E L +M
Sbjct: 262 TSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK 321
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +PDV +++ L A G QI +E E +S GI + +N + SY G +EK
Sbjct: 322 DGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEK 381
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M++ + VTYNI+I + G + F M ++ + SL+
Sbjct: 382 ALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIY 441
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+Y GK + S + S D + + L+ AY + + + M+ G P
Sbjct: 442 SYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPP 501
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
D + +++ A++ G + + ++K
Sbjct: 502 DAIICSSLMEAFNKGGEPERVLQLMEFMKK 531
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E+F M C N S+ AL+ AYG +G+ +A LL M+ QPD
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKD-GIQPD 327
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL- 121
V + S L+ +C + +++ +L ++GI NTV YN+ I +Y F + E L
Sbjct: 328 VVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY---LSFGDYEKALE 384
Query: 122 --VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M + +PD T N + G+ + +E + + + ++ L+ SY
Sbjct: 385 LYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYI 444
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K ++TY +I A+ G K+ LF+ M I P +
Sbjct: 445 KQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAI 504
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
SL+ A+ G+PE++ ++ F+ I L+
Sbjct: 505 ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLN 537
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 165/367 (44%), Gaps = 38/367 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ + Q ++A LF M + C + + +L+ A+ R+G + A +++E M
Sbjct: 20 LYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAA-IP 78
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMF 114
P TY+ +I +C A + K L M+ G+ P+ VT+N ++ A Y +A +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 115 AEM----------------------------ELTLVKMLSE---DCEPDVWTMNCTLRAF 143
E+ + L + E C PDV T + ++
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
GQ++ + ++ + G++P+I +N LL +Y G + A+ ++K I
Sbjct: 199 CIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V+Y +++A+GR+ ++ +F M+ KP+ V+ +L+ AYG AG ++ +L
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ I D V + L+ A GR + ++ +LE + RG + V Y + +++Y + G
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378
Query: 324 KNHAKEF 330
A E
Sbjct: 379 YEKALEL 385
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ Y R D+A L M+ C+PD + Y+ LI + +A +
Sbjct: 9 ARNDIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAIN 67
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ DM I P TYN +I+A G A + + KM PD+ T N L A
Sbjct: 68 IMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALK 127
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
N Q +E + A + T NI++ K G + + M++
Sbjct: 128 NGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPD 187
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTY ++ ++ G ++ + +F LM +E +KP+ V SL+ AY G + ++
Sbjct: 188 VVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFN 247
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + + D V + L++AYGR + + V M++ CKP+KV+Y ++ AY + G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPD 348
M KE L+ +M++ + +PD
Sbjct: 308 M---LKEAVGLLHEMEKDGI---QPD 327
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 161/369 (43%), Gaps = 41/369 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
Q KA F+ M ++T + ++ + G +A L M+ C PDV T
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ S + +A+ M +G++PN V YN+L+ AY M E L + ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHRE-ALAIFNLI 249
Query: 126 SED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ PD+ + L A+G S Q + + + K + +P+ ++N L+D+YG AG
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ ++ M+K +V+ + ++ A GR + ++E + RS I + V S
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSG 369
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF--------------- 289
+++Y G EK + + S++ D V +N L+ +L +
Sbjct: 370 IKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKV 429
Query: 290 --------------------AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+E + M++ GC PD +TY T+++AY+ G K
Sbjct: 430 SSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGG---GWKR 486
Query: 330 FQDLVEKMD 338
DL ++M+
Sbjct: 487 AWDLFKEME 495
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
MKN + + Y ++I+ + D+ + L +M +P+ YN+LI A+ RA
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG 60
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ + ML P T N + A G +G + +K G+ P + T N
Sbjct: 61 QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHN 120
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+L + + K + E M+ + + T NI+I + G + LF MR
Sbjct: 121 IVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRER 180
Query: 233 RIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
R K P VT S++ +Y G+ E ++ + + + V +N L+ AY
Sbjct: 181 RTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHR 240
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
E + ++++ G +PD V+Y +++ AY + A+E + ++K
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 12/327 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C+Q + + +A G D NT ++ + + +Y G ++KA L M+ + + +PD
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES-NVKPD 397
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K + + DM + Y++LI +Y + +E E T
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFS 457
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PDV T ++A+ G +++ + GI P + L++++ K G
Sbjct: 458 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGG 517
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E++ +ME+M+K +Y +I + D K + + S S TL
Sbjct: 518 EPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLN 577
Query: 243 SLVRAYGHAGKPEKLGSVL-RFIDN-SDIMLDT---VFFNCLVDAYGRLKCFAEMKGVLE 297
++ G GK E + + + + + S + L T V N LV G+ + + E VL+
Sbjct: 578 HVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLV--VGKWRKYIE---VLQ 632
Query: 298 VMQQRGCKPDKVTYRTMV-RAYSTNGM 323
M+ G P ++ ++ + NGM
Sbjct: 633 WMEDSGVHPTLYMFQNVLPYIWRENGM 659
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 164/336 (48%), Gaps = 13/336 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKS 72
LF M + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIEL 59
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPN 119
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 120 TASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 179
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG
Sbjct: 180 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 239
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ EK ++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++
Sbjct: 240 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQ 299
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TM+ AY G+ HAK +KRPD
Sbjct: 300 TMIVAYERAGLVAHAKRL----------LHELKRPD 325
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSDVIAIVLNAY 406
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 385 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 159/329 (48%), Gaps = 6/329 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G C++ A E+++ MV EG + ++F+AL+ A G+ + SLLE M++ +P+
Sbjct: 208 GLCRE---ALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL-GLKPN 263
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTL 121
+ TY+I I+ +A D+ ++ M G P+ VTY LIDA A K+ MEL
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL-F 322
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
VKM + +PD T L F + G + +++ + + ++ G P + TF IL+++ KA
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ +++ M+K + TYN +I R L LF M + + P+ T
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ YG +G+ +K + I + V N + + + E K + ++
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD VTY M++ YS G + A E
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M + GC + ++ LL A+G+SG ++ F L E M C+P+ T++I
Sbjct: 807 EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI-CSSCKPNTITHNI 865
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + +K+ + DK L D+ + P TY L+D ++ E + +M+
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ N + FG +G ++T + +++ GI+P + ++ L+ +AG +
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E +++ + YN++ID GR+ +++ L+ M+S I P T SL+
Sbjct: 986 HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNL 1045
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AG E+ G + + + + +N L+ Y V + M GC P+
Sbjct: 1046 GVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNT 1105
Query: 309 VTY 311
T+
Sbjct: 1106 GTF 1108
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + +Y+ LI+ L + L ++M G P+ TYN L+DA+G++ E+
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ C+P+ T N + S +D + S P+ T+ LLD
Sbjct: 847 LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLL 906
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G E+ + E M Y YNI+I+ FG+ GD+ LF+ M E I+P
Sbjct: 907 KSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLK 966
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ SLV AG+ + + + + LD++ +N ++D GR E + + M
Sbjct: 967 SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
Q RG PD TY +++ GM A K +++L
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 146/313 (46%), Gaps = 1/313 (0%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C + E + M +G + +FT L++A ++G D+AF LL+ M+ P+++
Sbjct: 347 CGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ-GVLPNLH 405
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ LI L+ D L ++M T G+ P TY ID YG++ + T KM
Sbjct: 406 TYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM 465
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P++ N +L + G++ + + + +S G+ P T+N+++ Y KAG
Sbjct: 466 KIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQV 525
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ ++ M + I+ N +I+ +AG + + +F ++ ++ P+ VT +L
Sbjct: 526 DEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTL 585
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ G G+ ++ + + + +T+ FN ++D + +L M C
Sbjct: 586 IAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNC 645
Query: 305 KPDKVTYRTMVRA 317
PD +T+ T++
Sbjct: 646 MPDVLTFNTIIHG 658
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 15/332 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E L + M G N ++T + GR+G D+A +++ M++ C PD
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDD-GCGPD 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY------GRAKMF-A 115
V TY++LI + A D L M +P+ VTY T++D + GR K F +
Sbjct: 299 VVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWS 358
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
EME ++ PDV T + A +G ID + + G+ P+++T+N L+
Sbjct: 359 EME-------ADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ + + M+ T TY + ID +G++G + F M+ I
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V + + + G+ + + + ++ + D+V +N ++ Y + E +
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
L M + C+PD + +++ G + A
Sbjct: 532 LSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 34/349 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---- 56
+LG+ + ++A + + M D+GC + ++T L+ A +G D A L MK +
Sbjct: 273 VLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP 332
Query: 57 ------------PDC------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
DC PDV T++IL+ + KA D+ LL
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M QG+ PN TYNTLI R + M + P +T + +G S
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKS 452
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ D + +EK + GI P+I N L S + G + + ++ + VTY
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N+++ + +AG + + L M + +P + + SL+ AG+ ++ + + +
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKD 572
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ V +N L+ G+ + M GC P+ +T+ T++
Sbjct: 573 MKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTIL 621
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 4/283 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
+L + R G F+L+++ + D+NTY I+ K + M
Sbjct: 133 ILRIHRRVGDMVVVFNLMQNQI----IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREA 188
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G N +YN LI ++ + E +M+ E +P + T + + A G +T+
Sbjct: 189 GFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETV 248
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ E+ +S G++P+I T+ I + G+AG ++ +M+ M+ +VTY ++IDA
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDA 308
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
AG L LF M++ KP VT +++ + G ++ ++ D
Sbjct: 309 LCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPD 368
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ F LV+A + E +L+VM+++G P+ TY T++
Sbjct: 369 VITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 121/265 (45%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ LI L++ + + M +G++P+ T++ L+ A G+ + ++ L +M
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S +P+++T +R G +G+ID + ++ + G P + T+ +L+D+ AG
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + M+ + VTY ++D F GDL +++ + M ++ P +T L
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V A AG ++ +L + ++ + +N L+ R+ + + M+ G
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKE 329
P TY + Y +G + A E
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALE 460
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 2/243 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + +KA E F+ M G N + A L + G +A + +K+ PD
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN-GLAPD 508
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++++K KA D+ LLSDMS P+ + N+LI+ +A E
Sbjct: 509 SVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFC 568
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ P V T N + G GQ+ + + G P+ TFN +LD K
Sbjct: 569 RLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKND 628
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ M + ++T+N +I + +LF M+ + + P CVTLC
Sbjct: 629 EVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLC 687
Query: 243 SLV 245
+L+
Sbjct: 688 TLL 690
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 109/277 (39%), Gaps = 36/277 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + EL++ M+ C NT + +++ +S DKA L + + D P
Sbjct: 836 GKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV-SGDFSPT 894
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY L+ LK+ ++ + L +M G RPN YN LI+ +G+
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954
Query: 123 KMLSEDCEPDVWTM-----------------------------------NCTLRAFGNSG 147
+M+ E PD+ + N + G S
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+I+ Y++ QS GI P + T+N L+ + G AG E+ + E +Q + TYN
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+I + +G+ +++ M P+ T L
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 158/372 (42%), Gaps = 38/372 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK Q ++A ELF +M GC NT +F +L ++ D A +L M T +C P
Sbjct: 589 LGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM-TTMNCMP 647
Query: 62 DVNTYSILIKSCL-------KAFAFDKVQALLSD--MSTQGIRPNTVTYNTLIDAYGRAK 112
DV T++ +I + + F +++ +L+ ++ + P V + DA+ A+
Sbjct: 648 DVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRA--FGN-----------------------S 146
F + + + + ED + T T + FG+
Sbjct: 708 DFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKH 767
Query: 147 GQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Q + + +F + G++P++ ++N L++ + + E + M+ + + T
Sbjct: 768 KQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN+++DA G++G + ++ L+ M KP+ +T ++ + +K + +
Sbjct: 828 YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV 887
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ D + L+D + E K + E M GC+P+ Y ++ + G N
Sbjct: 888 SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVN 947
Query: 326 HAKE-FQDLVEK 336
A E F+ +V +
Sbjct: 948 TACELFKRMVRE 959
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%)
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ M + Q+ I+ +NT+ I+ G + M++ + +YN
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I ++G ++ ++R M E +KPS T +L+ A G E + S+L +++
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + + GR E +++ M+ GC PD VTY ++ A T G + A
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318
Query: 328 KEF 330
E
Sbjct: 319 MEL 321
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + + ++ S
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEE--DRVPGDLVLYSNLIELSRKLCDYSRAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M + PD + L + +
Sbjct: 69 RLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQ 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + +
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + + ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLQ----------ELKRPD 319
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 40/339 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G +T S+ LL+ Y + F +A SL M+ C
Sbjct: 88 VFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMREI-QCS 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 FDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L + ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVF------------------------ 275
+ + AG+ E+ V R ++ ++ TVF
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPNVVEVFDKMR 382
Query: 276 ----------FNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+++AYG+L F + V MQ GC
Sbjct: 383 GLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDEGC 421
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + ED C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLFDD-ALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P ++ LL
Sbjct: 62 RAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ S+ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 280
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 172/375 (45%), Gaps = 36/375 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + F M + G T +F L+ YG +G +++ LLZ M + +P++ TY++
Sbjct: 159 QEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNV 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ K ++ M G++P+ VTYNT+ AY + ++ E +++M + +
Sbjct: 219 LVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G+I + + + G+QP++ FN L+ + A + ++
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVN 338
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M+++ ++T++ +++A+ AG + + +F M RI+P L + Y
Sbjct: 339 EVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGY 398
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GR----LKCFAEM--------- 292
AG+PEK +L + S + V F +++ + GR +K F +M
Sbjct: 399 VRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNL 458
Query: 293 -------------------KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ VL++M++ +P+K T + A+ G+K A
Sbjct: 459 KTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSA 518
Query: 334 VEKMDETCLAMKRPD 348
V K +ET R D
Sbjct: 519 V-KNEETTHETDRED 532
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TY+ L+ + FD + +++S + G+ P+++ +N +I+A+ + E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSY 178
KM +P T N ++ +G +G+ + +K Z Q ++P++ T+N+L+ ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAW 223
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ K V+ M VTYN + A+ + G+ Q E + M++ ++P+
Sbjct: 224 CNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNE 283
Query: 239 VTLCSLVRAYGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T C ++ Y GK E L V R D + + V FN L+ + + VL
Sbjct: 284 RTCCIIIGGYCKEGKIKEALQFVYRMKD-LGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+M++ G KPD +T+ T++ A+S G + +E F D+V+
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ ++ + G +PS+ T+ LL + HF+ + +++ +++ + +
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID- 265
N VI+AF +G++++ F M+ KP+ T +L++ YG AG+PE+ +L +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQ 205
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + +N LV A+ + V+ M G +PD VTY T+ AY+ NG +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 326 HAK----EFQDL-VEKMDETC 341
A+ E Q+ V+ + TC
Sbjct: 266 QAEGIILEMQNSNVQPNERTC 286
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 154/335 (45%), Gaps = 7/335 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M D+G N +++T LL AY R+G + ++ +L M+ + D YS+L++
Sbjct: 67 LLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRR-GIRLDTAGYSMLVRLY 125
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ K L+ +M G+ + Y+ LID +G+ A+ KM +E +PD+
Sbjct: 126 RDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDI 185
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N ++ G + + + Q G+ P F +++ G+ G ++++ + +
Sbjct: 186 STWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDG 245
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ + + Y +++D +G+ G + +R+E ++ S C L AY G
Sbjct: 246 MKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGL 305
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
E+ +VL+ ++ + V N L++A+G E V + ++ G PD VTY T
Sbjct: 306 CEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTT 365
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+++ + AK+F+ + E E A PD
Sbjct: 366 LMKTFM------RAKKFEKVSEVYREMERAGCTPD 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P Y+ LI++ +A + +ALL +M G RP+ YN L++ A +
Sbjct: 7 RPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAHLRLADR 66
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M + + T L A+ +G+++ + + GI+ +++L+ Y
Sbjct: 67 LLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRLYR 126
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++K ++ MQ+ + Y+ +ID FG+ G L +F MR+E IKP
Sbjct: 127 DNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDIS 186
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ + G ++ + + D F ++ G + E+K + + M
Sbjct: 187 TWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGM 246
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ RG K Y +V Y G A+E
Sbjct: 247 KNRGFKESGAVYAVLVDIYGQYGHFRDARE 276
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A F +M +EG + + F ++S G G +D+ L + MKN + Y++
Sbjct: 202 KRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNR-GFKESGAVYAV 260
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + F + ++ + + ++ + + L +AY + + + L M E
Sbjct: 261 LVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQTVNVLQLMEEEG 320
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP++ +N + AFG +G+ ++ + +G+ P + T+ L+ ++ +A FEK+S
Sbjct: 321 FEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVS 380
Query: 189 AVMEYMQK 196
V M++
Sbjct: 381 EVYREMER 388
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ +LF M + G + + L+ YG+ G F A + ++ + Q
Sbjct: 230 LGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALR-AENMQL 288
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ +L + + ++ +L M +G PN V N LI+A+G A E
Sbjct: 289 SPRVFCVLANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVF 348
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ PDV T ++ F + + + + + Y + + AG P +L D+
Sbjct: 349 QHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCTPDRKAREMLHDA 404
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 163/336 (48%), Gaps = 13/336 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKS 72
LF M + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIEL 60
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+
Sbjct: 61 SRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPN 120
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 121 TXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S+ YG
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTL 240
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ EK ++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++
Sbjct: 241 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQ 300
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TM+ AY G+ HAK +KRPD
Sbjct: 301 TMIVAYERAGLVAHAKRL----------LHELKRPD 326
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 95 VFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 153
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 154 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 213
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 214 FRLMQRKNIEQNVVTYNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 274 VGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 330 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 389
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 390 GLGYFPDSDVIAIVLNAY 407
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 167 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 225
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ + K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 226 VVTYNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 285
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 286 KLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 341
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 342 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 386 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 426
Query: 303 G 303
G
Sbjct: 427 G 427
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++A + + M + G + + +LSA+ + KA S E MK T +PD
Sbjct: 232 GSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGT-HIRPD 290
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K +DK + + M + P+ VT+ ++I Y E
Sbjct: 291 TTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAA 350
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E +P++ + N + A+ G + + + + G +P I ++ LL++YG+
Sbjct: 351 FNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGR 410
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ K + + M++ +V+YN +IDA+G G L + R M E I+P+ V+
Sbjct: 411 SQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVS 470
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A G + K+ +VL + I L+TV +N + + + + + G+ + M+
Sbjct: 471 ICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMR 530
Query: 301 QRGCKPDKVTYRTMV 315
++ K D VTY ++
Sbjct: 531 KKKIKTDSVTYTVLI 545
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ ++A LF M + C + +++ A+++A+GR+G + A ++++ M P +TY
Sbjct: 166 RTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAA-IPPSRSTY 224
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +C + + + + M+ G+ P+ VT+N ++ A+ +++ M
Sbjct: 225 NNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKG 284
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-----AGIQPSINTFNILLDSYGKA 181
PD T+N + Q D K E F S + P + TF ++ Y
Sbjct: 285 THIRPDTTTLNIVIHCLVKLRQYD---KAIEIFNSMREKKSECTPDVVTFTSIIHLYSVC 341
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E A M IV+YN +I A+ G + F ++ +P V+
Sbjct: 342 GQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSY 401
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ AYG + KP K + + + + + V +N L+DAYG A+ +L M+Q
Sbjct: 402 TSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQ 461
Query: 302 RGCKPDKVTYRTMVRA 317
G +P+ V+ T++ A
Sbjct: 462 EGIQPNVVSICTLLAA 477
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 164/350 (46%), Gaps = 16/350 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K +Q +KA E+F +M ++ C + +FT+++ Y G + + +M
Sbjct: 301 LVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAF-NMMIAEGL 359
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ LI + ++ +++ G RP+ V+Y +L++AYGR++ +
Sbjct: 360 KPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQ 419
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M +P++ + N + A+G++G + K + + GIQP++ + LL + G
Sbjct: 420 IFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACG 479
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ K+ V+ + V YN I + G+ + L++ MR ++IK V
Sbjct: 480 RCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSV 539
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM-----LDTVFFNCLVDAYGRLKCFAEMKG 294
T L+ K K G L F++ +IM L ++ + AY + E +
Sbjct: 540 TYTVLISG---CCKMSKYGEALSFME--EIMHLKLPLSKEVYSSAICAYSKQGQIVEAES 594
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
+M+ GC PD VTY M+ AY N +N K + L E+M+ + + +
Sbjct: 595 TFNLMKSSGCYPDVVTYTAMLDAY--NAAENWEKAYA-LFEEMEASSIKL 641
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 13/324 (4%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E F M+ EG N S+ AL+ AY G+ ++A +K +PD+
Sbjct: 341 CGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQN-GFRPDIV 399
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + ++ K + + M ++PN V+YN LIDAYG + A+ L +M
Sbjct: 400 SYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREM 459
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
E +P+V ++ L A G + ++ + GI+ + +N + S G +
Sbjct: 460 EQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEY 519
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDA------FGRAGDLKQMEYLFRLMRSERIKPSC 238
+K + + M+K VTY ++I +G A L ME + L ++ S
Sbjct: 520 DKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEA--LSFMEEIMHL----KLPLSK 573
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
S + AY G+ + S + +S D V + ++DAY + + + + E
Sbjct: 574 EVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEE 633
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M+ K D + ++R+++ G
Sbjct: 634 MEASSIKLDTIACAALMRSFNKGG 657
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ + G + + +KN + + + Y+++I+ + D+ + L
Sbjct: 116 KNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFF 175
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ TYN +I+A+GRA + + ML P T N + A G+SG
Sbjct: 176 EMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 235
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+K G+ P + T NI+L ++ + K + E M+ H T N
Sbjct: 236 NWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLN 295
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + + +F MR ++ + P VT S++ Y G+ E + +
Sbjct: 296 IVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMI 355
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + V +N L+ AY E ++Q G +PD V+Y +++ AY + +
Sbjct: 356 AEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPH 415
Query: 326 HAKEFQDLVEK 336
A++ D +++
Sbjct: 416 KARQIFDRMKR 426
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+AH F + G + S+T+LL+AYGRS KA + + MK +P++ +Y+ L
Sbjct: 381 EAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNK-LKPNLVSYNAL 439
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + +L +M +GI+PN V+ TL+ A GR +++ L
Sbjct: 440 IDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGI 499
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ + N + + N G+ D Y+ + I+ T+ +L+ K + + +
Sbjct: 500 KLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALS 559
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
ME + + Y+ I A+ + G + + E F LM+S P VT +++ AY
Sbjct: 560 FMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYN 619
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
A EK ++ ++ S I LDT+ L+ ++ + + + E M+++
Sbjct: 620 AAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDT 679
Query: 310 TYRTMVRAYS 319
+ MV A S
Sbjct: 680 IFFEMVSACS 689
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A F M GC + ++TA+L AY + ++KA++L E M+ + D
Sbjct: 588 QIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEME-ASSIKLDTIAC 646
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIR-PNTVTY------NTLIDAYGRAKMFAEMEL 119
+ L++S K +V +L M + I +T+ + + L D M +E
Sbjct: 647 AALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEP 706
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+L ++S C +N L + G SG+I+TM K + K ++G ++NT++ILL +
Sbjct: 707 SL-PVISSGC------LNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLL 759
Query: 180 KAGHFEKMSAVMEYMQ 195
+G++ K V+++M+
Sbjct: 760 SSGNWRKYLEVLQWME 775
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++F + GC + ++ LL AYG+SG D+ F L + M +T +C+ + T++I
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNI 860
Query: 69 LIKSCLKAFAFDKVQALLSD-MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +KA D L D MS + P TY LID ++ E + ML
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P+ N + FG +G+ D +++ G++P + T+++L+D G ++
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVR 246
+ +++ + +V YN++I+ G++ L++ LF M++ R I P T SL+
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G AG E+ G + I + + + FN L+ Y V + M G P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 307 DKVTYRTM 314
+ TY +
Sbjct: 1101 NTGTYEQL 1108
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + +A+E+ + M DEGC + ++T L+ A + D A + E MK T +
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK-TGRHK 325
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY L+ D V+ S+M G P+ VT+ L+DA +A F E T
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + P++ T N + ++D + + +S G++P+ T+ + +D YGK
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E M+ + IV N + + +AG ++ + +F ++ + P VT
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G+ ++ +L + + D + N L++ + E + M+
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+ KP VTY T++ NG A E F+ +V+K
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 144/314 (45%), Gaps = 1/314 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + L + M G N +FT + GR+G ++A+ +L+ M + C P
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGP 291
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY++LI + A D + + M T +P+ VTY TL+D + + ++
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PDV T + A +G + + GI P+++T+N L+ +
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + M+ T TY + ID +G++GD F M+++ I P+ V
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + + AG+ + + + + ++ D+V +N ++ Y ++ E +L M +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 302 RGCKPDKVTYRTMV 315
GC+PD + +++
Sbjct: 532 NGCEPDVIVVNSLI 545
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 1/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ + + M +G + +FT L+ A ++G F +AF L+ M++ P+++TY+
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNT 403
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI L+ D L +M + G++P TY ID YG++ T KM ++
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P++ N +L + +G+ ++ + + G+ P T+N+++ Y K G ++
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + ++ N +I+ +A + + +F M+ ++KP+ VT +L+
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK ++ + + +T+ FN L D + +L M GC PD
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY T++ NG A F ++K+
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 14/299 (4%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A +L E QP + TY++LI L+A + Q + + + G P+ TYN L+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGI 164
DAYG++ E+ +M + +CE + T N + +G + D ++ Y+
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P+ T+ L+D K+G + + E M Y YNI+I+ FG+AG+
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
LF+ M E ++P T LV G+ ++ + + S + D V +N +++ G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 285 R-------LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ L F EMK RG PD TY +++ GM A + + +++
Sbjct: 1008 KSHRLEEALVLFNEMK------TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++ EL++ M C+ANT + ++S ++G D A L + + D P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K+ + + L M G RPN YN LI+ +G+A
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD+ T + + G++D +++ + +G+ P + +N++++ GK+
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 183 HFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E+ + M+ + + TYN +I G AG +++ ++ ++ ++P+ T
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 242 CSLVRAYGHAGKPE 255
+L+R Y +GKPE
Sbjct: 1071 NALIRGYSLSGKPE 1084
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A +LF+ M+D GC N + L++ +G++G D A +L + M +P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK-EGVRP 959
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ TYS+L+ D+ ++ G+ P+ V YN +I+ G++ E +
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 122 VKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M S PD++T N + G +G ++ K Y + Q AG++P++ TFN L+ Y
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTY 206
+G E AV + M +S TY
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 146/374 (39%), Gaps = 41/374 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G KQ A + M + G N S+ L+ +S +A + M +P
Sbjct: 167 GGLKQAPYA---LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI-LEGFRPS 222
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TYS L+ K D V LL +M T G++PN T+ I GRA E L
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 123 KMLSEDCEPDVWTMN------CTLRA-----------------------------FGNSG 147
+M E C PDV T CT R F ++
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D++++ + + + G P + TF IL+D+ KAG+F + ++ M+ + TYN
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I R L LF M S +KP+ T + YG +G +
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + V N + + + E K + ++ G PD VTY M++ YS G + A
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 328 KEFQDLVEKMDETC 341
+ L E M+ C
Sbjct: 523 IKL--LSEMMENGC 534
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D NTY + KS + L M G N +YN LI +++ E
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E P + T + + G ID++ ++ ++ G++P++ TF I + G+A
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + +++ M +VTY ++IDA A L + +F M++ R KP VT
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + ++ + D V F LVDA + F E L+VM+
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 302 RGCKPDKVTYRTMV 315
+G P+ TY T++
Sbjct: 392 QGILPNLHTYNTLI 405
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F + D G ++ ++ ++ Y + G D+A LL M C+P
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEP 536
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI + KA D+ + M ++P VTYNTL+ G+ E
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + C P+ T N + ++ K K G P + T+N ++ K
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 182 GHFEKMSAVMEYMQKYHY 199
G ++ M+K Y
Sbjct: 657 GQVKEAMCFFHQMKKLVY 674
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 35/237 (14%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L A G+++ M ++ Q I+ NT+ + S G ++ + M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 195 QKYHYSWTIVTYN---------------------IVIDAF--------------GRAGDL 219
+++ + +YN ++++ F G+ D+
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ L + M + +KP+ T +R G AGK + +L+ +D+ D V + L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+DA + K V E M+ KPD+VTY T++ +S N + K+F +EK
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 148/310 (47%), Gaps = 1/310 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF M +G A+ ++++L+ G +D +L M + PDV T+S
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSA 320
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K + + L ++M T+GI P+T+TYN+LID + + E M+S+
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CEPD+ T + + ++ + ++D + + + S G+ P+ T+N L+ + ++G
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M ++VTY I++D G+L + +F M+ R+ ++
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+A K + S+ + + + D V +N ++ + +E + M++ GC PD
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 309 VTYRTMVRAY 318
TY ++RA+
Sbjct: 561 FTYNILIRAH 570
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 1/317 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF+ M + A+ ++ ++ + + G FD A SL M+ + DV TYS LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME-MKGIKADVVTYSSLI 287
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+D +L +M + I P+ VT++ LID + + E + +M++
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + F + + ++ S G +P I T++IL++SY KA + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ +TYN ++ F ++G L + LF+ M S + PS VT L+
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ K + + S + L +N ++ + + + +G KPD VT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 311 YRTMVRAYSTNGMKNHA 327
Y M+ G + A
Sbjct: 528 YNVMIGGLCKKGSLSEA 544
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 3/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ + KQ + + M G + + + T +++ Y R AFS+L +P
Sbjct: 80 VARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEP 138
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T+S L+ CL+ + V AL+ M RP+ VT +TLI+ +E +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M+ +PD T L SG + K + I+ S+ ++I++DS K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F+ ++ M+ +VTY+ +I G + R M I P VT
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + GK + + + I DT+ +N L+D + + C E + ++M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 301 QRGCKPDKVTYRTMVRAY 318
+GC+PD VTY ++ +Y
Sbjct: 378 SKGCEPDIVTYSILINSY 395
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 9/328 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF++M+ F L SA R+ +D + M+ + D+ T +I+I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMI 112
Query: 71 KS-CLKA---FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
C K FAF ++L G P+T+T++TL++ + +E + +M+
Sbjct: 113 NCYCRKKKLLFAF----SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD+ T++ + G++ ++ G QP T+ +L+ K+G+
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M++ + ++V Y+IVID+ + G LF M + IK VT SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ GK + +LR + +I+ D V F+ L+D + + E K + M RG P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
D +TY +++ + + A + DL+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLM 376
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 26/342 (7%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L MV+ + + + L++ G +A L++ M QPD TY +
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPV 216
Query: 70 I----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
+ KS A A D L M + I+ + V Y+ +ID+ + +F EME
Sbjct: 217 LNRLCKSGNSALALD----LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ +K DV T + + N G+ D K + I P + TF+ L+D +
Sbjct: 273 MKGIK-------ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + + M + +TYN +ID F + L + +F LM S+ +P
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ +Y A + + + R I + ++ +T+ +N LV + + K + +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M RG P VTY ++ NG N A E + EKM ++
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALE---IFEKMQKS 484
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A ELFQ MV G + ++ LL +G +KA + E M+ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR- 485
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+ Y+I+I A D +L +S +G++P+ VTYN +I + +E +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ KM + C PD +T N +RA G SG I ++E E+ + G +T +++D
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIKMVID 603
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 159/339 (46%), Gaps = 4/339 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+L CK E +A +L + M G + +T ++S + + G A L + M+
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRK-K 377
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TY+ +I K+ + + + ++M +G+ P+ VTY LID Y +A E
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M+ + P+V T +G+ID + + G+QP++ T+N +++
Sbjct: 438 SVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G+ E+ +ME M + +TY ++DA+ + G++ + L R+M ++R++P+
Sbjct: 498 CKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTL 557
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ + +G E ++ ++ IM + FN L+ Y + +
Sbjct: 558 VTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKA 617
Query: 299 MQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
M RG PD TY +++ + MK +++VEK
Sbjct: 618 MHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 656
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 21/345 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK ++ AH L M D G + S+ ++S Y R G DK L++ +K +P
Sbjct: 255 LGKVRE---AHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGK-GLKP 310
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-------GRAKMF 114
D Y+ +I K + + LL M G+ P+ V Y T+I + K+F
Sbjct: 311 DEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLF 370
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
EM + PD+ T + SG++ + + + G++P T+ L
Sbjct: 371 DEMR-------RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D Y KAG ++ +V M + + +VTY + D + G++ L M + +
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ T ++V G E+ ++ +D + DT+ + L+DAY ++ A+
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+L +M + +P VT+ ++ + +GM ++ + L+E M E
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGM---LEDGERLIEWMLE 585
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 38/265 (14%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E +A + MV +G N ++TAL ++G D A LL M Q
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQ 484
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ ++ K ++ L+ +M G P+T+TY TL+DAY + A+
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK-------------------------- 154
L ML++ +P + T N + F SG ++ E+
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604
Query: 155 ---------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Y+ G+ P NT+NIL+ + KA + ++ + + M + YS T T
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMR 230
Y+ +I F + + LF MR
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMR 689
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+ NTV+ N ++ + E LV+M PDV + + + G++D +
Sbjct: 237 GVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKV 296
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K ++ + G++P +N ++ K G + ++ M+K+ V Y VI
Sbjct: 297 LKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISG 356
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F + G++ LF MR ++I P VT S++ +GK + + + + D
Sbjct: 357 FCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPD 416
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V + L+D Y + E V M Q+G P+ VTY + NG + A E
Sbjct: 417 EVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL 474
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ + G NT S +L + G +A +LL M + + PDV +Y +++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNF-PDVVSYGVVV 284
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ DKV L+ ++ +G++P+ YN +I L L K
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNII-------------LLLCK------- 324
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+G++ E+ + G+ P + ++ + K G+ +
Sbjct: 325 ---------------NGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M++ IVTY VI ++G + + +F M + ++P VT +L+ Y
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ ++ SV + + + V + L D + +L M ++G +P+ T
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Y T+V G + V+ M+E LA PD
Sbjct: 490 YNTIVNGLCKIG------NIEQTVKLMEEMDLAGFYPD 521
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M +G + S T L+ AYGR + KA ++ M+ T QP
Sbjct: 151 GKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQ-TSGPQPS 209
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++KS ++ + + +A+ D+ + +P+ ++ +I Y +A +A+
Sbjct: 210 PVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARK 269
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M T N +L +F + + Y++ Q AG++P + ++++L+ +YG
Sbjct: 270 LFAQMSERGIPLSTVTFN-SLMSF--ETEYKEVSNIYDQMQRAGLKPDVVSYSLLIKAYG 326
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T +YNI++DAF +G +++ +FR MR R++P
Sbjct: 327 KARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLC 386
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++V AY +A + R I + + V + L+ Y +L ++ V E M
Sbjct: 387 SYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERM 446
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ +G +P++ Y T++ A N
Sbjct: 447 RIQGVEPNQTIYTTIMDAQGRN 468
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M + G +T +F +L+S + + ++ + M+ +PDV +YS+L
Sbjct: 266 QARKLFAQMSERGIPLSTVTFNSLMSFETE---YKEVSNIYDQMQRA-GLKPDVVSYSLL 321
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK+ KA ++ A+ +M G+RP +YN L+DA+ + + E M
Sbjct: 322 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRV 381
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EPD+ + + A+ N+ +++ EK + + + G++P++ + L+ Y K + EK+
Sbjct: 382 EPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMR 441
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
V E M+ Y ++DA GR D F+ M + P
Sbjct: 442 VYERMRIQGVEPNQTIYTTIMDAQGRNSDFGNAVIWFKEMEARGYPP 488
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 156/355 (43%), Gaps = 30/355 (8%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-D 62
K Q +K E+F+ DE N + + G A +L+ +N + P D
Sbjct: 52 KFMQRKKKEEVFKDGADETEQMNWRRMMREIEQEG------SAVPILKTQRNRKEPLPRD 105
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRP-NTVTYNTLIDAYGRAKMFAEMELTL 121
V +++ LK + V +L + TQ + + + L+ AYG+ F+ E L
Sbjct: 106 VILGTLIRFKQLKKWNI--VSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVL 163
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + +P V + + A+G Q E + + Q++G QPS T+ I+L S +
Sbjct: 164 KYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPQPSPVTYQIILKSLVEG 223
Query: 182 GHFEKMSAVMEYM---QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+++ A+ E + ++ + ++++I + +AGD Q LF M I S
Sbjct: 224 DKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLST 283
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT SL+ + +++ ++ + + + D V ++ L+ AYG+ + E V E
Sbjct: 284 VTFNSLM---SFETEYKEVSNIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEE 340
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR----PDF 349
M G +P + +Y ++ A++ +G LVE+ + AM+R PD
Sbjct: 341 MLDAGVRPTRKSYNILLDAFAISG----------LVEEANTVFRAMRRHRVEPDL 385
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 148/310 (47%), Gaps = 1/310 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF M +G A+ ++++L+ G +D +L M + PDV T+S
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSA 349
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K + + L ++M T+GI P+T+TYN+LID + + E M+S+
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CEPD+ T + + ++ + ++D + + + S G+ P+ T+N L+ + ++G
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M ++VTY I++D G+L + +F M+ R+ ++
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+A K + S+ + + + D V +N ++ + +E + M++ GC PD
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589
Query: 309 VTYRTMVRAY 318
TY ++RA+
Sbjct: 590 FTYNILIRAH 599
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 1/317 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF+ M + A+ ++ ++ + + G FD A SL M+ + DV TYS LI
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME-MKGIKADVVTYSSLI 316
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+D +L +M + I P+ VT++ LID + + E + +M++
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + F + + ++ S G +P I T++IL++SY KA + +
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ +TYN ++ F ++G L + LF+ M S + PS VT L+
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ K + + S + L +N ++ + + + +G KPD VT
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 556
Query: 311 YRTMVRAYSTNGMKNHA 327
Y M+ G + A
Sbjct: 557 YNVMIGGLCKKGSLSEA 573
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 3/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ + KQ + + M G + + + T +++ Y R AFS+L +P
Sbjct: 109 VARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEP 167
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T+S L+ CL+ + V AL+ M RP+ VT +TLI+ +E +
Sbjct: 168 DTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M+ +PD T L SG + K + I+ S+ ++I++DS K
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F+ ++ M+ +VTY+ +I G + R M I P VT
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + GK + + + I DT+ +N L+D + + C E + ++M
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406
Query: 301 QRGCKPDKVTYRTMVRAY 318
+GC+PD VTY ++ +Y
Sbjct: 407 SKGCEPDIVTYSILINSY 424
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 9/328 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF++M+ F L SA R+ +D + M+ + D+ T +I+I
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMI 141
Query: 71 KS-CLKA---FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
C K FAF ++L G P+T+T++TL++ + +E + +M+
Sbjct: 142 NCYCRKKKLLFAF----SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD+ T++ + G++ ++ G QP T+ +L+ K+G+
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M++ + ++V Y+IVID+ + G LF M + IK VT SL+
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ GK + +LR + +I+ D V F+ L+D + + E K + M RG P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
D +TY +++ + + A + DL+
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLM 405
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 26/342 (7%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L MV+ + + + L++ G +A L++ M QPD TY +
Sbjct: 187 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPV 245
Query: 70 I----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
+ KS A A D L M + I+ + V Y+ +ID+ + +F EME
Sbjct: 246 LNRLCKSGNSALALD----LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 301
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ +K DV T + + N G+ D K + I P + TF+ L+D +
Sbjct: 302 MKGIK-------ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 354
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + + M + +TYN +ID F + L + +F LM S+ +P
Sbjct: 355 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 414
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ +Y A + + + R I + ++ +T+ +N LV + + K + +
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M RG P VTY ++ NG N A E + EKM ++
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALE---IFEKMQKS 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A ELFQ MV G + ++ LL +G +KA + E M+ +
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR- 514
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+ Y+I+I A D +L +S +G++P+ VTYN +I + +E +
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ KM + C PD +T N +RA G SG I ++E E+ + G +T +++D
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIKMVID 632
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 142/320 (44%), Gaps = 3/320 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + KA E M G N S+ ++ Y G + A +L+ M+ +PD
Sbjct: 238 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR-VKGIEPD 296
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ L M G+ PN VTYNTLID Y
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + P V T N + A G++ + ++ + GI P T+NIL++ Y + G
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 416
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K + M T VTY +I R +K+ + LF + + + P +
Sbjct: 417 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 476
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++V + G E+ +L+ +D + D V FN L+ R E + +L+ M++R
Sbjct: 477 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 536
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KPD ++Y T++ Y G
Sbjct: 537 GIKPDHISYNTLISGYGRRG 556
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 136/326 (41%), Gaps = 38/326 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A LF MV+ G N ++ L+ Y G ++AFS + M
Sbjct: 306 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIM 364
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA--------- 111
P V+TY++L+ + + ++ +M +GI P+ +TYN LI+ Y R
Sbjct: 365 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDL 424
Query: 112 --KMFAE-MELTLV-----------------------KMLSEDCEPDVWTMNCTLRAFGN 145
+M ++ +E T V K+L + PDV N +
Sbjct: 425 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCA 484
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G ++ ++ + P TFN L+ + G E+ +++ M++ ++
Sbjct: 485 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 544
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I +GR GD+K + M S P+ +T +L++ + + +L+ +
Sbjct: 545 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 604
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAE 291
N I D + L++ G + E
Sbjct: 605 NKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
+L + + ++A +LF+ ++D+G + F A++ + +G ++AF LL+ M K+ P
Sbjct: 446 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP- 504
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD T++ L++ + ++ + LL +M +GI+P+ ++YNTLI YGR +
Sbjct: 505 --PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 562
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+MLS P + T N ++ + + D E+ ++ + GI P +T+ L++
Sbjct: 563 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Query: 179 GKA 181
G
Sbjct: 623 GNV 625
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 3/273 (1%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ +L++ C + D+ M +GI P T N ++ + + + +M
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
V+T N + G++ + + G +P++ ++N ++ Y G+
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E +++ M+ TY +I + G L++ LF M + P+ VT +L
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y + G E+ S + IM +N LV A E +++ M+++G
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
PD +TY ++ YS G +AK+ DL +M
Sbjct: 399 IPDAITYNILINGYSRCG---NAKKAFDLHNEM 428
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 9/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ KQ ++L MV +GC N ++ L+ +YGR+ + A + M+ C+
Sbjct: 389 ILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRV-GCE 447
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D + M G+ P+T TY+ +I+ G+A A
Sbjct: 448 PDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKL 507
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + + K Y QSAG QP T++I+++ G
Sbjct: 508 FCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGH 567
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ AV M++ ++ Y +++D +G+AG++++ ++ M + ++P+ T
Sbjct: 568 CGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPT 627
Query: 241 LCSLVRAYGHAGKPEK----LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
SL+ A+ K L S+L N + T+ +C +A + +M
Sbjct: 628 CNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEA----RSPYDMGIYC 683
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
E+M G +++HA +F DL+ D
Sbjct: 684 ELMAVTGHPAHMFLLSLPSAGPDGQNVRDHASKFLDLMHSEDR 726
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A + +K P D +TY+ ++ +A F + LL M G +PN VTYN LI
Sbjct: 363 ALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLI 422
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+YGRA + +M CEPD T + +G +D + Y++ Q+AG+
Sbjct: 423 HSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLS 482
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GKAGH + M + +VTYNI+I +A + + L
Sbjct: 483 PDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKL 542
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+R M+S +P VT ++ GH G ++ +V + + + D + LVD +G+
Sbjct: 543 YRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGK 602
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + M G +P+ T +++ A+
Sbjct: 603 AGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAF 635
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TY T++ GRAK F + L +M+ + C+P+V T N + ++G + ++ + +
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEM 441
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
Q G +P T+ L+D + KAG + + + MQ S TY+++I+ G+AG L
Sbjct: 442 QRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHL 501
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF M + P+ VT ++ A + + R + ++ D V ++ +
Sbjct: 502 AAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIV 561
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
++ G E + V M+++ PD+ Y +V + G N K +Q
Sbjct: 562 MEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAG--NVEKAWQ 611
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 154/303 (50%), Gaps = 3/303 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEF 330
K
Sbjct: 309 KRL 311
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++S P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 323 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I+ + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQ-N 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 279 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + + +
Sbjct: 335 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANLIEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + GV MQ+
Sbjct: 379 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 154/303 (50%), Gaps = 3/303 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 13 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 70
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 71 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK 130
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 131 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 190
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I + VT S++ YG + EK ++++ + N
Sbjct: 191 TLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 250
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 251 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 310
Query: 328 KEF 330
K
Sbjct: 311 KRL 313
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 90 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 148
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 149 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 208
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 209 FRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 268
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++S P +
Sbjct: 269 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 324
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 325 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMR 384
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 385 GLGYFPDSNVIALVLNAY 402
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED------------------- 128
+M + + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 59
Query: 129 CE-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
C+ PD+ N + FG + + ++AG+ P+ ++
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 119
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 120 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 179
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I+P+ V+ +L+R YG A + + R + +I+ + V +N ++ YG+ +
Sbjct: 180 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 239
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 240 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 282
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 162 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQ-N 220
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 221 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 280
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 281 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 336
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 337 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLFSKYKKYANVVEVF 380
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + GV MQ+
Sbjct: 381 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQEV 421
Query: 303 GC 304
GC
Sbjct: 422 GC 423
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 6/318 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK+ ++ +F+ M GC N +++ ++ + G D+AF LE M ++
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAG 603
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PDV +Y+I+I KA + + +L M GI P+ VTYNTL+ + + + F +
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M+ +PD T N + + ++ D E +E ++ + + T+N ++D
Sbjct: 664 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 723
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G ++ +M++M + VTYNI ID + G L + L M + R + S
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS 783
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T+ + + KL + + I T FN L+DA+ + K E +L
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT--FNLLIDAFTKTKRLDEALTLLG 841
Query: 298 VMQQRGCKPDKVTYRTMV 315
+M QRGC P +TY ++
Sbjct: 842 LMVQRGCSPSVITYNMVI 859
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 1/304 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ A++ + R D A L+ M N PDV TY+ILI KA DK +L +
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEM-NERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +G+ P+TVT+N+++D +A F L M +C P T N +
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + ++F S+G P + T++IL D K G ++ +++ M + +VTYN
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID +A ++ L + S P VT +V G+ +K ++ +
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + L++ R E + + M + C D + Y ++V Y + A+
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 329 EFQD 332
+ D
Sbjct: 527 KVVD 530
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 148/365 (40%), Gaps = 36/365 (9%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A EL + M +GC N ++ L+ ++ +KA+ LLE + ++
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS-GFV 433
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+I++ K DK ++ M +G P+ +TY L++ R E
Sbjct: 434 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 493
Query: 121 LVKMLSEDCEPD--------------------------------VWTMNCTLRAFGNSGQ 148
+M+S+DC D + N + + G+
Sbjct: 494 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 553
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + +E G P+I T+NI++D K G ++ +E M +V+YNI
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID +A K+ + M I P VT +L+ + + + +L+ + +
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK-VTYRTMVRAYSTNGMKNHA 327
+ D V +N L+ + + ++ M + GC TY T++ G A
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 733
Query: 328 KEFQD 332
D
Sbjct: 734 LLLMD 738
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 140/334 (41%), Gaps = 12/334 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +KA + G +T L A+ ++G A LE +N P PD Y
Sbjct: 175 QIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA---LEIFRNIP--SPDAIAY 229
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + D L +M+ + + P+ TYN LID +A + L +M+
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD T N + +G+ + +PS T+N L+ K + ++
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ + +VTY+I+ D + G + + L + M + P+ VT +L+
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRG 303
A K EK +L + +S + D V + +VD GRL +M +E M +RG
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM---VEGMLKRG 466
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
C P +TY ++ G + A F+++V K
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 5/315 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + K P+ A F D G +T + L +G D+ ++ E M +
Sbjct: 99 VLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GYA 157
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY ++IKS + DK +L +G +P Y L A+ + +
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA--- 214
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+++ PD N + D + ++ + P + T+NIL+D K
Sbjct: 215 -LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCK 273
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A +K S ++ M + VT+N ++D +AG ++ L +M +PSC T
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ ++ ++ +S + D V ++ L D + E +++ M
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 301 QRGCKPDKVTYRTMV 315
+GC P+ VTY T++
Sbjct: 394 GKGCTPNLVTYNTLI 408
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 4/241 (1%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
+G + +T T N + + +ML PD +T + +++ QID
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+K + G +P ++ + IL ++ K G + + + S + YN +I
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIH 234
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
R D + M ++ P T L+ A K +K +L + + +
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
DTV FN ++D + F +L VM +R C+P TY T++ + AK+
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 332 D 332
D
Sbjct: 355 D 355
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + A + + M+ G D + ++ L+S ++ A+ L+ M
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 713
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ +I K + L+ M+ G+ NTVTYN ID + E L
Sbjct: 714 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 773
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK-CYEKFQSAGIQPSINTFNILLDSYGKA 181
+M D D + + + Q+D K E G+ + +TFN+L+D++ K
Sbjct: 774 EM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 830
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ M + S +++TYN+VI + + + LF M I S V+
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
L+ G+ ++ VL + +SD +D
Sbjct: 891 TVLIYGLCGQGRGKEALQVLEEMASSDCEID 921
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 20 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYS 78
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 79 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 138
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 139 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 198
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 199 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 258
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 259 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 294
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 48 VFGKAKLFREARSLISEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 106
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 107 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 166
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 167 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 226
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 227 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 282
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 283 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 342
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 343 GLGYFPDSNVITVVLNAY 360
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 279
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 178
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 179 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 238
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 239 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 294
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 295 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 338
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I TV N AYG+L+ F + V MQ+
Sbjct: 339 DKMRGLGY------------FPDSNVI---TVVLN----AYGKLQEFDKANDVYMEMQEV 379
Query: 303 GC 304
GC
Sbjct: 380 GC 381
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 1/331 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +LFQ ++ G +T ++T+L+ + FD A L M N C P
Sbjct: 20 LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPP 78
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+++I + K ++ L+ M G P+ VTYNT++D ++ E L
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLF 138
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C P+ + N + +ID + + + ++ I P ++ IL+D KA
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M + + VTYN+VI A L + LF+ MRS+ +PS T
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ A+ GK ++ +L+ + + + D V ++ L+ + + + +LE M +
Sbjct: 259 NILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
R CKP VT T++ G A+E D
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 4/337 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + E+A LF M GC N +S ++ + D+A + M+ D
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME-ARD 180
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD +Y ILI KA ++ L M GI P+ VTYN +I A E
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M S+ C P +T N + A G++D + ++ G P + T++ L+
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++E M K T+VT N +I +AG +K+ + M S P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +LV + AG+ E+ +L + + + V + LV + E GV
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
M+ GC P+ TY ++ + + G + K F ++V
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ELF++M +GC + +F L+ A+ + G D+AF LL+ M + PDV TYS
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV-PDVVTYST 295
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI D + LL DM + +P VT NTLI +A E L M+S
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T N + +GQ + + + G+ P++ T+ L+ KA +
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M+ + + TY +I F AG + LF M I P V +L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 249 GHAGKPEKLGSVLR 262
+G+ + +LR
Sbjct: 476 CKSGRSARALEILR 489
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 128/329 (38%), Gaps = 49/329 (14%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M + ++ S+ L+ ++G + A L + + ++ P Y+ LI A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHS-GVTPSTVAYTSLIHGLCMAN 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+FD + L +DM+ +G P+ VTYN +IDA + M E + KM+ + PDV T N
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ SG+++ + + + G P+ + N ++ + ++ V M+
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+Y I+ID +AG L + LFR M I PS
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS-------------------- 219
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V +N ++ E + + M+ +GC+P + T+ ++ A
Sbjct: 220 ---------------AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 318 YSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
+ G KMDE +KR
Sbjct: 265 HCKRG-------------KMDEAFRLLKR 280
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 142/320 (44%), Gaps = 3/320 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + KA E M G N S+ ++ Y G + A +L+ M+ +PD
Sbjct: 260 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR-VKGIEPD 318
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ L M G+ PN VTYNTLID Y
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + P V T N + A G++ + ++ + GI P T+NIL++ Y + G
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 438
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K + M T VTY +I R +K+ + LF + + + P +
Sbjct: 439 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 498
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++V + G E+ +L+ +D + D V FN L+ R E + +L+ M++R
Sbjct: 499 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 558
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KPD ++Y T++ Y G
Sbjct: 559 GIKPDHISYNTLISGYGRRG 578
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 136/326 (41%), Gaps = 38/326 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A LF MV+ G N ++ L+ Y G ++AFS + M
Sbjct: 328 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIM 386
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA--------- 111
P V+TY++L+ + + ++ +M +GI P+ +TYN LI+ Y R
Sbjct: 387 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDL 446
Query: 112 --KMFAE-MELTLV-----------------------KMLSEDCEPDVWTMNCTLRAFGN 145
+M ++ +E T V K+L + PDV N +
Sbjct: 447 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCA 506
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G ++ ++ + P TFN L+ + G E+ +++ M++ ++
Sbjct: 507 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 566
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I +GR GD+K + M S P+ +T +L++ + + +L+ +
Sbjct: 567 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 626
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAE 291
N I D + L++ G + E
Sbjct: 627 NKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
+L + + ++A +LF+ ++D+G + F A++ + +G ++AF LL+ M K+ P
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP- 526
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD T++ L++ + ++ + LL +M +GI+P+ ++YNTLI YGR +
Sbjct: 527 --PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 584
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+MLS P + T N ++ + + D E+ ++ + GI P +T+ L++
Sbjct: 585 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Query: 179 GKA 181
G
Sbjct: 645 GNV 647
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 3/273 (1%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ +L++ C + D+ M +GI P T N ++ + + + +M
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
V+T N + G++ + + G +P++ ++N ++ Y G+
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E +++ M+ TY +I + G L++ LF M + P+ VT +L
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y + G E+ S + IM +N LV A E +++ M+++G
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
PD +TY ++ YS G +AK+ DL +M
Sbjct: 421 IPDAITYNILINGYSRCG---NAKKAFDLHNEM 450
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 20 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 78
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 79 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 138
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 139 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 198
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 199 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 258
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 259 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 294
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 279
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 48 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 106
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 107 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 166
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 167 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 226
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 227 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 282
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V M+
Sbjct: 283 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKXKKYSNVVEVFNKMR 342
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 343 GLGYFPDSDVIAXVLNAY 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 178
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 179 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 238
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 239 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 294
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 295 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKXKKYSNVVEVF 338
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ +R G+ + + VL +AYG+L+ F + V MQ+
Sbjct: 339 NKMRGLGYFPDSDVIAXVL-------------------NAYGKLQEFDKANDVYMEMQEV 379
Query: 303 GC 304
GC
Sbjct: 380 GC 381
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ + L MV +GC NT ++ L+ +YGR+ ++A ++ + M+ C+P
Sbjct: 359 LGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEA-GCEP 417
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 418 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 477
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + +T K Y Q+AG QP T++I+++ G
Sbjct: 478 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 537
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT- 240
G E+ V MQ+ ++ Y +++D +G+AG++++ ++ M ++P+ T
Sbjct: 538 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTC 597
Query: 241 ---LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + +R + + L S+L + + T+ +C DA
Sbjct: 598 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F + LL +M G +PNTVTYN
Sbjct: 329 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYN 388
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M CEPD T + +G +D Y++ Q+A
Sbjct: 389 RLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAA 448
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VT+NI+I +A + +
Sbjct: 449 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 508
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ V + + + D + LVD
Sbjct: 509 LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 568
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M G +P+ T +++ +
Sbjct: 569 WGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTF 604
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P+ T N + ++G + ++
Sbjct: 344 GFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEA 403
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+++ Q AG +P T+ L+D + KAG + + + MQ S TY+++I+
Sbjct: 404 MNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINC 463
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A E + R + N+ D
Sbjct: 464 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 523
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
V ++ +++ G E +GV MQ++ PD+ Y +V + G N K +Q
Sbjct: 524 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG--NVEKAWQ 580
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 135/305 (44%), Gaps = 5/305 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +++Q M G +T +++ +++ G++G A L M C P++ T++I+I
Sbjct: 438 AMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMI 496
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ L DM G +P+ VTY+ +++ G E E +M ++
Sbjct: 497 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 556
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + +G +G ++ + Y++ AG++P++ T N LL ++ + + +
Sbjct: 557 PDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 616
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M ++ TY +++ A M + +LM + P+ + L + A G
Sbjct: 617 LQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLM-AVSGHPAHMFLLKMPPA-GP 674
Query: 251 AGKP--EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + + L F+ + D + +VD + E V EV + PD
Sbjct: 675 DGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAVKNVYPDA 734
Query: 309 VTYRT 313
+ ++
Sbjct: 735 LREKS 739
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 185 EKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGRAGDLKQME-------YLFRLMRSERIKP 236
E +S ++ + H + + + +DA+ LKQM+ + + L R K
Sbjct: 288 ENVSGILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKH 347
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
T ++V G+ G+ ++ G++ R +D +TV +N L+ +YGR E
Sbjct: 348 DGHTYTTMV---GNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAM 404
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
V + MQ+ GC+PD+VTY T++ ++ G + A D+ ++M L+
Sbjct: 405 NVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA---MDMYQRMQAAGLS 451
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D C ++ ++ L + Y R+G D+ ++++ M +
Sbjct: 330 VFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTM-TSKGVM 388
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ +I + KA D L S M G PN TYN+++ G+ ++
Sbjct: 389 PNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV 448
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G+ + + K + ++ G +P +TFN L+ +Y +
Sbjct: 449 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYAR 508
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M K ++ + TYN +++A R GD K E + + MR++ KP+ +
Sbjct: 509 CGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENS 568
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y AG + + V + I + + + LV + + M+ + +Q
Sbjct: 569 YSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ 628
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ G KPD V +M+ ++ N M + A+E + +
Sbjct: 629 KYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHE 664
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 19/334 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + A LF M D GC N ++ ++L+ G+ + +L MK C P+
Sbjct: 402 GKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMK-LNGCAPN 460
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFA 115
T++ ++ C + + V +L +M G P+ T+NTLI AY R AKM+
Sbjct: 461 RATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYG 520
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
E M+ P V T N L A G E + ++ G +P+ N++++LL
Sbjct: 521 E-------MVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLL 573
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHY--SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
Y KAG+ + + V + + H SW ++ ++ + R L+ ME F ++
Sbjct: 574 HCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCR--HLRGMERAFDQLQKYG 631
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
KP V + S++ + K +L FI + + +NCL+D Y R + +
Sbjct: 632 YKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAE 691
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
VL+ +Q G +PD V+Y T+++ + G+ A
Sbjct: 692 EVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEA 725
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 2/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
++A +LF M + G D ++ +L YG+ G +D+ LL+ M+ + + D T S
Sbjct: 232 KRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMR-SKGLELDEFTCS 290
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +C + D+ + L+++ G +P TVTYN+++ +G+A ++ E L +M
Sbjct: 291 TVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDN 350
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C PD T N + +G +D + S G+ P+ T+ ++D+YGKAG +
Sbjct: 351 NCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDA 410
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ + + TYN V+ G+ + + + M+ P+ T +++
Sbjct: 411 LRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAV 470
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GK + VLR + N D FN L+ AY R + + M + G P
Sbjct: 471 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 308 KVTYRTMVRAYSTNG 322
TY ++ A + G
Sbjct: 531 VTTYNALLNALARRG 545
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 3/345 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +LF + E + +++T +L +Y R+G + +A L MK
Sbjct: 189 ILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEI-GLD 247
Query: 61 PDVNTYSILIKSCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + TY++++ K ++D++ LL +M ++G+ + T +T+I A GR M E
Sbjct: 248 PTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARK 307
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L ++ +P T N L+ FG +G ++ + P T+N L +Y
Sbjct: 308 FLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYV 367
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG ++ AV++ M +TY VIDA+G+AG LF LM+ P+
Sbjct: 368 RAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVY 427
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T S++ G + E + VL + + + +N ++ + VL M
Sbjct: 428 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM 487
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMK-NHAKEFQDLVEKMDETCLA 343
+ G +PDK T+ T++ AY+ G + + AK + ++V+ C+
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVT 532
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 1/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK + E ++ M GC N ++ +L+ G + +L MKN +
Sbjct: 435 MLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNC-GFE 493
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +T++ LI + + + + +M G P TYN L++A R + E
Sbjct: 494 PDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESV 553
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M ++ +P+ + + L + +G + +EK ++ + PS L+ + K
Sbjct: 554 IQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHK 613
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
H M + +QKY Y +V N ++ F R + + + ++P+ T
Sbjct: 614 CRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFT 673
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y G+ K VL+ I NS D V +N ++ + R E GVL M
Sbjct: 674 YNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMT 733
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+G +P VTY T + Y+ + + A E
Sbjct: 734 TKGIQPTIVTYNTFLSGYAGMELFDEANE 762
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S Q +R + ++ GR + + E DV L ++ +G+
Sbjct: 172 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKY 231
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYSWTIVTYNI 208
+ K + G+ P++ T+N++LD YGK G ++++ +++ M+ T +
Sbjct: 232 KRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCST 291
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VI A GR G L + ++ KP VT S+++ +G AG + S+L+ +++++
Sbjct: 292 VISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNN 351
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D+V +N L Y R E V++ M +G P+ +TY T++ AY G ++ A
Sbjct: 352 CPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 411
Query: 329 EFQDLVEKM 337
L++ +
Sbjct: 412 RLFSLMKDL 420
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 36/305 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+C + +++ MV G ++ ALL+A R G + A S+++ M+ T +P+
Sbjct: 507 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMR-TKGFKPN 565
Query: 63 VNTYSILIKSCLKAF---AFDKVQALLSD------------------------------- 88
N+YS+L+ KA +KV+ + D
Sbjct: 566 ENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFD 625
Query: 89 -MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G +P+ V N+++ + R KMF++ L + +P+++T NC + + G
Sbjct: 626 QLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREG 685
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ E+ + Q++G +P + ++N ++ + + G ++ V+ M TIVTYN
Sbjct: 686 ECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYN 745
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ + + + R M +PS +T LV Y AGK E+ + I
Sbjct: 746 TFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKEL 805
Query: 268 DIMLD 272
DI D
Sbjct: 806 DISFD 810
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT ++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + ++ M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 1/336 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK +A + + M D C ++ ++ L + Y R+G D+ ++++ M +
Sbjct: 331 VFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTM-TSKGVM 389
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ +I + KA D L S M G PN TYN+++ G+ ++
Sbjct: 390 PNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV 449
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N L G+ + + K + ++ G +P +TFN L+ SY +
Sbjct: 450 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYAR 509
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M K ++ + TYN +++A GD K E + + M+++ KP+ +
Sbjct: 510 CGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETS 569
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y AG + V + I + + + LV + + + M+ + +Q
Sbjct: 570 YSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQ 629
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ G KPD V +M+ +S N M + A+E + +
Sbjct: 630 KYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHE 665
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 37/350 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYS 67
++A +LF M G D ++ +L YG+ G + + LL+ M+ + + D T S
Sbjct: 233 KRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMR-SKGLEFDEFTCS 291
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +C + D+ + L+++ G +P TV YN+++ +G+A ++ E L +M
Sbjct: 292 TVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDN 351
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C PD T N + +G +D + S G+ P+ T+ ++D+YGKAG +
Sbjct: 352 NCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDA 411
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M+ + + TYN V+ G+ + + + M+ P+ T +++
Sbjct: 412 LRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAV 471
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEM-------- 292
GK + VLR + N D FN L+ +Y R K + EM
Sbjct: 472 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPC 531
Query: 293 --------------------KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ V++ MQ +G KP++ +Y ++ YS G
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAG 581
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 161/413 (38%), Gaps = 85/413 (20%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + A LF M D GC N ++ ++L+ G+ + +L MK C P+
Sbjct: 403 GKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMK-LNGCAPN 461
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFA 115
T++ ++ C + + V +L +M G P+ T+NTLI +Y R AKM+
Sbjct: 462 RATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYG 521
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
EM + P V T N L A + G E + Q+ G +P+ ++++LL
Sbjct: 522 EM-------VKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574
Query: 176 DSYGKAG-----------------------------------HFEKMSAVMEYMQKYHYS 200
Y KAG H M + +QKY Y
Sbjct: 575 HCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYK 634
Query: 201 WTIV-----------------------------------TYNIVIDAFGRAGDLKQMEYL 225
+V TYN ++D + R + + E +
Sbjct: 635 PDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEV 694
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ +++ +P V+ ++++ + G ++ VL + I V +N + Y
Sbjct: 695 LKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAG 754
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
++ F E V+ M + C+P ++TY+ +V Y G A +F ++++D
Sbjct: 755 MELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEID 807
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 37/330 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ Q A +LF + E + +++T +L AY RSG + +A L
Sbjct: 190 ILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDL----------- 238
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMEL 119
FDK++ + G+ P VTYN ++D YG+ + + +
Sbjct: 239 ------------------FDKMEGI-------GLDPTLVTYNVMLDVYGKMGRSWGRILE 273
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M S+ E D +T + + A G G +D K + + G +P +N +L +G
Sbjct: 274 LLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFG 333
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + ++++ M+ + +TYN + + RAG L + + M S+ + P+ +
Sbjct: 334 KAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAI 393
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ AYG AG+ + + + + + +N ++ G+ ++ VL M
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ GC P++ T+ TM+ S G N+ +
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNK 483
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S Q +R + ++ GR + + E DV L A+ SG+
Sbjct: 173 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKY 232
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKMSAVMEYMQKYHYSWTIVTYNI 208
++K + G+ P++ T+N++LD YGK G + ++ +++ M+ + T +
Sbjct: 233 KRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCST 292
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VI A GR G L + ++ KP V S+++ +G AG + S+L+ +++++
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
D++ +N L Y R E V++ M +G P+ +TY T++ AY G ++ A
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDA 411
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 125/305 (40%), Gaps = 36/305 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+C + +++ MV G ++ ALL+A G + A S+++ M+ T +P+
Sbjct: 508 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQ-TKGFKPN 566
Query: 63 VNTYSILIKSCLKA---FAFDKVQALLSD------------------------------- 88
+YS+L+ KA +KV+ + D
Sbjct: 567 ETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFD 626
Query: 89 -MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G +P+ V N+++ + R KMF++ L + +P+++T NC + +
Sbjct: 627 QLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVRED 686
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ E+ + Q++ +P + ++N ++ + + G ++ V+ M TIVTYN
Sbjct: 687 ECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYN 746
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ + + + R M +PS +T LV Y AGK E+ + I
Sbjct: 747 TFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEI 806
Query: 268 DIMLD 272
DI D
Sbjct: 807 DISFD 811
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 163/336 (48%), Gaps = 13/336 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKS 72
LF M + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIEL 59
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K + K ++ S + G P+ V YN +I+ +G+AK+F E + +M P+
Sbjct: 60 SRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPN 119
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + L + + + + + + + T NI++D YG+ G ++ +
Sbjct: 120 TASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 179
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG
Sbjct: 180 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 239
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ EK ++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++
Sbjct: 240 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQ 299
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TM+ AY G+ HAK +KRPD
Sbjct: 300 TMIVAYERAGLVAHAKRL----------LHELKRPD 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 94 VFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 152
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 153 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 212
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 213 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 272
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 273 VGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 328
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 329 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 388
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 389 GLGYFPDSDVIAXVLNAY 406
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 166 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 224
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 225 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 284
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 285 KLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 341 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 384
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 385 DKMRGLG-------------YFPDSDVI------AXVLNAYGKLQEFDKANDVYMEMQEV 425
Query: 303 GC 304
GC
Sbjct: 426 GC 427
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K + + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSNVIAVVLNAY 361
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 240 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYXNVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 380
Query: 303 GC 304
GC
Sbjct: 381 GC 382
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ + ++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLH----------ELKRPD 319
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ + K
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ +AG + + L ++ P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRDIA 326
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ LV AG+ E+ V R ++ + D F ++ + + K + + V + M
Sbjct: 327 IHILV----GAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMC 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ +S G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKL 280
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII----------------- 261
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+W+ G++D ++K +S+G+ + ++ +Y KAG
Sbjct: 262 ---------SIWS---------KVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILVGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKA 76
M + + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K
Sbjct: 3 MRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKL 60
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
+ K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ +
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 121 TTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+V+YN ++ +G A + +LFRLM+ + I + VT S++ YG + EK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 240
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
++++ + N I +++ ++ ++ +G+ + + ++ G + D+V Y+TM+
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300
Query: 317 AYSTNGMKNHAKEF 330
AY G+ HAK
Sbjct: 301 AYEKAGLVAHAKRL 314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S+T LL+ Y + F +A S+ M+ C
Sbjct: 91 VFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIK-CL 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 150 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 210 FRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ +AG + + L ++S P +
Sbjct: 270 AGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKS----PDNIP 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 326 RDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMR 385
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 386 GLGYFPDSNVIALVLNAY 403
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED------------------- 128
+M + + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 129 CE-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
C+ PD+ N + FG + + ++AG+ P+ ++
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 121 TTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I+P+ V+ +L+R YG A + + R + +I+ + V +N ++ YG+ +
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 240
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKL 283
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 163 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQ-N 221
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+A +
Sbjct: 222 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQ 281
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 282 KLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 337
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 338 RIEEATYV---------------FRQAIDA-GEVRDITVFERMIHLFSKYKKYANVVEVF 381
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + GV MQ+
Sbjct: 382 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQEV 422
Query: 303 GC 304
GC
Sbjct: 423 GC 424
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 32 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 90
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 91 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 150
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 151 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 210
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 211 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 270
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 271 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 306
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 15 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 74
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 75 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 134
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 135 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 194
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 195 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 254
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 255 SGVEIDQILFQTMIVAYERAGLVAHAKRL----------LHELKRPD 291
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 60 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 118
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 119 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 178
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 179 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 238
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 239 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 294
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ D F ++ + K ++ + V + M+
Sbjct: 295 RDTAIHILAGAGRIEEATYVFRQAIDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMR 354
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 355 GLGYFPDSNVIAVVLNAY 372
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L M + + V Y+ LI+ + +++ ++ PD+ N + FG
Sbjct: 4 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 63
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + ++AG+ P+ +++ LL Y + F + +V M++ + T
Sbjct: 64 AKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTT 123
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
NI+ID +G+ G K+ + LF MR I+P+ V+ +L+R YG A + + R +
Sbjct: 124 CNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 183
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MK 324
+I + V +N ++ YG+ + +++ MQ RG +P+ +TY T++ + G +
Sbjct: 184 RKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLD 243
Query: 325 NHAKEFQDL 333
A FQ L
Sbjct: 244 RAAMLFQKL 252
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 132 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 190
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 191 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 250
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 251 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 306
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G A D+ E + L+ + + V +
Sbjct: 307 RIEEATYV---------------FRQAIDA-GEAKDITVFERMIHLLSKYKKYSNVVEVF 350
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 351 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 391
Query: 303 GC 304
GC
Sbjct: 392 GC 393
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 141/301 (46%), Gaps = 3/301 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
CD T +T ++S G KA L+ M+ +V+TYS L+ C+KA +
Sbjct: 71 CDVYT--YTTIISQCGSHQQLRKALELVAEMRGH-GVVCNVHTYSALMNVCIKANELELA 127
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ + +G PN VTYN LID +G+ + E L + + +P+V T N L A
Sbjct: 128 LDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSA 187
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
SGQ + + YE+ + G QP+ T+ L+ +YGK G E+ + + M +
Sbjct: 188 CNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERN 247
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TY+ +I A +AG + L M + KP+ VT +L+ A G+ + V
Sbjct: 248 VITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFE 307
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + D V + L+ A+ R + L+ MQ +G +PD Y ++ A + +G
Sbjct: 308 QMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSG 367
Query: 323 M 323
+
Sbjct: 368 V 368
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 49/320 (15%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-----DVNTYSILIKSCLKAFAFD 80
++++ ALL + GL ++A L + +++ PD DV TY+ +I C
Sbjct: 31 DSRALAALLKELHKVGLSNRASELFDWLRSLPDNHELAHLCDVYTYTTIISQCGSHQQLR 90
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L+++M G+ N TY+ L++ +A E+EL L DV
Sbjct: 91 KALELVAEMRGHGVVCNVHTYSALMNVCIKAN---ELELAL----------DV------- 130
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
Y + G P++ T+NIL+D +GK G++++ V++ ++
Sbjct: 131 ---------------YGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTK 175
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ TYN ++ A R+G + ++ M ++ +P+ T +L+ AYG GK E+ +
Sbjct: 176 PEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRI 235
Query: 261 LRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + + + ++ L+ A GR + E+ L+ M + CKP+ VT+ ++ A
Sbjct: 236 FQDMVRRGCERNVITYSSLISACEKAGRWQLALEL---LDEMHRDNCKPNTVTFNALLSA 292
Query: 318 YSTNGMKNHAKEFQDLVEKM 337
+ G K QD+ E+M
Sbjct: 293 CAQGG---QWKAAQDVFEQM 309
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++A ++ A+ D+G +++ +LSA RSG + A + E M QP
Sbjct: 154 GKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERML-ADGAQPT 212
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMEL 119
TY+ LI + K ++ + DM +G N +TY++LI A GR ++ E+
Sbjct: 213 ATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALEL-- 270
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M ++C+P+ T N L A GQ + +E+ S G +P ++ IL+ ++
Sbjct: 271 -LDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFD 329
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ + + ++ MQ + + YN+VI+A R+G L
Sbjct: 330 RGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVL 369
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E+A +FQ MV GC+ N ++++L+SA ++G + A LL+ M +C+P+
Sbjct: 224 GKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRD-NCKPN 282
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T++ L+ +C + + Q + M + G +P+ V+Y LI A+ R + L
Sbjct: 283 TVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALD 342
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+M + PDV N + A SG + K + FQ+A Q
Sbjct: 343 EMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQAATRQ 385
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY +G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERSGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLH----------ELKRPD 319
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ R+G + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERSGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMC 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y ++G
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERSG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+PD TY LI + +A +
Sbjct: 141 ARNDIYNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+ DM I P+ TYN LI+A G + + E KM PD+ T N L A+
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
+ Q +E + A ++P TFNI++ K G + + M++
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VT+ ++ + G+++ +F M +E +KP+ V+ +L+ AY G SVL
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + I+ D V + CL+++YGR + + K V +M++ KP+ VTY ++ AY +NG
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 323 MKNHAKEF 330
A E
Sbjct: 440 FLAEAVEI 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 161/379 (42%), Gaps = 73/379 (19%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A +L++ M P +TY+
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNN 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE------------ 116
LI +C + + + + M+ G+ P+ VT+N ++ AY + +++
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 117 ----------------------MELTLVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDT 151
L L + E +C PDV T + + G+I+
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 152 MEKCYEKFQSAGIQPSINTFNI-----------------------------------LLD 176
+E + G++P+I ++N LL+
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
SYG++ K V M+K +VTYN +IDA+G G L + +FR M + IKP
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V++C+L+ A + K + +VL + I L+T +N + +Y + +
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 297 EVMQQRGCKPDKVTYRTMV 315
+ M+++ K D VT+ ++
Sbjct: 519 QSMRKKKVKADSVTFTILI 537
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 157/322 (48%), Gaps = 3/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K Q +A +LF +M ++ C + +FT+++ Y G + ++ E M
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV-AEGL 351
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ L+ + ++L D+ GI P+ V+Y L+++YGR++ + +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E +P+V T N + A+G++G + + + + + GI+P++ + LL +
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++ + V+ Q + YN I ++ A +L++ L++ MR +++K V
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K + S L+ +++ I L ++ ++ AY + E + + M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ GC+PD + Y +M+ AY+ +
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNAS 613
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 1/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +F+AMV EG N S+ AL+ AY G+ A S+L +K PDV +Y+
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN-GIIPDVVSYTC 395
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S ++ K + + M + +PN VTYN LIDAYG AE +M +
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V ++ L A S + ++ QS GI + +N + SY A EK
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ + M+K VT+ I+I R + + M I + S++ AY
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + S+ + + D + + ++ AY + + + +L M+ G +PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDS 635
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ ++RA++ G ++ DL+ +
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMRE 663
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 148/351 (42%), Gaps = 18/351 (5%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C + +K + A G + NT ++ + + +Y + +KA +L + M+
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK- 524
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ D T++ILI + + + + L +M I Y++++ AY + E
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M CEPDV L A+ S + + + ++ GI+P + L+ +
Sbjct: 585 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMRA 644
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + +M+ M++ +T + + A + K+ L ++M S
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
++ +G +GK E + + I S + ++ + L++ A G + + E
Sbjct: 705 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE--- 761
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK----MDETC 341
VLE M G +P YR ++ + G ++ EF+ L+ + M E C
Sbjct: 762 VLEWMSGAGIQPSNQMYRDII----SFGERSAGIEFEPLIRQKLGEMREEC 808
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 152 MEKCYEKFQSAGIQPSI----NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E C F+ IQ + + +N+++ + + ++ + MQK+ TY+
Sbjct: 123 IELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYD 182
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I+A GRAG + L M I PS T +L+ A G +G + V + + ++
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V N ++ AY + +++ E+M+ +PD T+ ++ S G + A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 328 KE-FQDLVEKMDETCLAMKRPD 348
+ F + EK E RPD
Sbjct: 303 LDLFNSMREKRAEC-----RPD 319
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +KA EL + M + G + + +LSA+ + KA + E MK++ PD
Sbjct: 234 GAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSS-KVAPD 292
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K + + L + M + P+ VTY +++ +Y +
Sbjct: 293 TCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAV 352
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E P++ + N L A+ + G + ++ + G +P I ++ LL++YG+
Sbjct: 353 FDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGR 412
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ EK V M+K V+YN +IDA+G AG LK+ L M + I+P ++
Sbjct: 413 SALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVIS 472
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ +L+ A G +P K+G +L + I L+TV +N + +Y L + + + M+
Sbjct: 473 ISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMR 532
Query: 301 QRGCKPDKVTYRTMV 315
KPD VTY ++
Sbjct: 533 TGNVKPDAVTYNILI 547
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 7/334 (2%)
Query: 9 EKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A +F+ M + E A + ++ + R D+A L M+ C+PD +TY+
Sbjct: 134 KHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEW-RCKPDTDTYN 192
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI + +A + ++ DM I P+ TYN +I+A G A + + KM
Sbjct: 193 SLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTEN 252
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD+ T N L AF N Q +E +S+ + P T NI++ K + +
Sbjct: 253 GVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEA 312
Query: 188 SAVMEYMQKYHY--SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ M++ +VTY ++ ++ G + + +F +M +E ++P+ V+ +L+
Sbjct: 313 IELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALL 372
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
AY G + + + + D V + L++AYGR + + V M++ CK
Sbjct: 373 GAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACK 432
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
P+KV+Y ++ AY + GM KE L+ +M++
Sbjct: 433 PNKVSYNALIDAYGSAGM---LKEAISLLHEMEQ 463
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q ++A LF M + C +T ++ +L+ A+ R+G + A ++++ M+ P TY
Sbjct: 168 QVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAA-IPPSRTTY 226
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR----AKMFAEMELTLV 122
+ +I +C A + K L M+ G+ P+ +T+N ++ A+ +K A E+
Sbjct: 227 NNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 123 KMLSED---------------------------------CEPDVWTMNCTLRAFGNSGQI 149
++ D C PDV T + ++ GQ
Sbjct: 287 SKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQA 346
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + ++ + G++P+I ++N LL +Y G + + +++ + IV+Y +
Sbjct: 347 ENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSL 406
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++A+GR+ ++ +F MR KP+ V+ +L+ AYG AG ++ S+L ++ I
Sbjct: 407 LNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGI 466
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
D + + L+ A GR + ++ +L + RG + + V Y + + +Y + G
Sbjct: 467 QPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLG 519
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ SG A + MK + + Y ++I+ + D+ + L
Sbjct: 118 RNFPLLIREITISGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFF 177
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+T TYN+LI A+ RA + + M P T N + A G +G
Sbjct: 178 EMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ +K G+ P + T NI+L ++ + K A E M+ + T N
Sbjct: 238 NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMN 297
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERI--KPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + + LF MR R P VT S++ +Y G+ E +V +
Sbjct: 298 IVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMV 357
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + V +N L+ AY E ++++Q G KPD V+Y +++ AY + +
Sbjct: 358 AEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPE 417
Query: 326 HAKE 329
A+E
Sbjct: 418 KARE 421
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E +F MV EG N S+ ALL AY G+ +A + +K +PD+
Sbjct: 343 CGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQN-GFKPDIV 401
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + ++ +K + + ++M +PN V+YN LIDAYG A M E L +M
Sbjct: 402 SYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ +PDV +++ L A G Q + +S GIQ + +N + SY G +
Sbjct: 462 EQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDY 521
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+K + M+ + VTYNI+I + G ++
Sbjct: 522 KKALELYTSMRTGNVKPDAVTYNILISGSCKLGSFRK 558
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+PD TY LI + +A +
Sbjct: 9 ARNDIYNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMN 67
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+ DM I P+ TYN LI+A G + + E KM PD+ T N L A+
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
+ Q +E + A ++P TFNI++ K G + + M++
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VT+ ++ + G+++ +F M +E +KP+ V+ +L+ AY G SVL
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + I+ D V + CL+++YGR + + K V +M++ KP+ VTY ++ AY +NG
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 323 MKNHAKEF 330
A E
Sbjct: 308 FLAEAVEI 315
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 161/379 (42%), Gaps = 73/379 (19%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A +L++ M P +TY+
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNN 86
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE------------ 116
LI +C + + + + M+ G+ P+ VT+N ++ AY + +++
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 117 ----------------------MELTLVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDT 151
L L + E +C PDV T + + G+I+
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 152 MEKCYEKFQSAGIQPSINTFNI-----------------------------------LLD 176
+E + G++P+I ++N LL+
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
SYG++ K V M+K +VTYN +IDA+G G L + +FR M + IKP
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V++C+L+ A + K + +VL + I L+T +N + +Y + +
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 297 EVMQQRGCKPDKVTYRTMV 315
+ M+++ K D VT+ ++
Sbjct: 387 QSMRKKKVKADSVTFTILI 405
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 157/322 (48%), Gaps = 3/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDE--GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K Q +A +LF +M ++ C + +FT+++ Y G + ++ E M
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV-AEGL 219
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ L+ + ++L D+ GI P+ V+Y L+++YGR++ + +
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E +P+V T N + A+G++G + + + + + GI+P++ + LL +
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 339
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++ + V+ Q + YN I ++ A +L++ L++ MR +++K V
Sbjct: 340 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K + S L+ +++ I L ++ ++ AY + E + + M
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ GC+PD + Y +M+ AY+ +
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNAS 481
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 1/328 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +F+AMV EG N S+ AL+ AY G+ A S+L +K PDV +Y+
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN-GIIPDVVSYTC 263
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S ++ K + + M + +PN VTYN LIDAYG AE +M +
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V ++ L A S + ++ QS GI + +N + SY A EK
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ + M+K VT+ I+I R + + M I + S++ AY
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + S+ + + D + + ++ AY + + + + M+ G +PD
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ ++RA++ G ++ DL+ +
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMRE 531
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 149/351 (42%), Gaps = 18/351 (5%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C + +K + A G + NT ++ + + +Y + +KA +L + M+
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK- 392
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ D T++ILI + + + + L +M I Y++++ AY + E
Sbjct: 393 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M CEPDV L A+ S + + + + ++ GI+P + L+ +
Sbjct: 453 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + +M+ M++ +T + + A + K+ L ++M S
Sbjct: 513 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 572
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
++ +G +GK E + + I S + ++ + L++ A G + + E
Sbjct: 573 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE--- 629
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK----MDETC 341
VLE M G +P YR ++ + G ++ EF+ L+ + M E C
Sbjct: 630 VLEWMSGAGIQPSNQMYRDII----SFGERSAGIEFEPLIRQKLGEMREEC 676
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ +N+++ + + ++ + MQK+ TY+ +I+A GRAG + L
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M I PS T +L+ A G +G + V + + ++ + D V N ++ AY +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETCLAMKRP 347
+++ E+M+ +PD T+ ++ S G + A + F + EK E RP
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-----RP 186
Query: 348 D 348
D
Sbjct: 187 D 187
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+PD TY LI + +A +
Sbjct: 141 ARNDIYNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+ DM I P+ TYN LI+A G + + E KM PD+ T N L A+
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
+ Q +E + A ++P TFNI++ K G + + M++
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VT+ ++ + G+++ +F M +E +KP+ V+ +L+ AY G SVL
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + I+ D V + CL+++YGR + + K V +M++ KP+ VTY ++ AY +NG
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 323 MKNHAKEF 330
A E
Sbjct: 440 FLAEAVEI 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 161/379 (42%), Gaps = 73/379 (19%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A +L++ M P +TY+
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNN 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE------------ 116
LI +C + + + + M+ G+ P+ VT+N ++ AY + +++
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 117 ----------------------MELTLVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDT 151
L L + E +C PDV T + + G+I+
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 152 MEKCYEKFQSAGIQPSINTFNI-----------------------------------LLD 176
+E + G++P+I ++N LL+
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
SYG++ K V M+K +VTYN +IDA+G G L + +FR M + IKP
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V++C+L+ A + K + +VL + I L+T +N + +Y + +
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 297 EVMQQRGCKPDKVTYRTMV 315
+ M+++ K D VT+ ++
Sbjct: 519 QSMRKKKVKADSVTFTILI 537
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 157/322 (48%), Gaps = 3/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K Q +A +LF +M ++ C + +FT+++ Y G + ++ E M
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV-AEGL 351
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ L+ + ++L D+ GI P+ V+Y L+++YGR++ + +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E +P+V T N + A+G++G + + + + + GI+P++ + LL +
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++ + V+ Q + YN I ++ A +L++ L++ MR +++K V
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K + S L+ +++ I L ++ ++ AY + E + + M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ GC+PD + Y +M+ AY+ +
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNAS 613
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +F+AMV EG N S+ AL+ AY G+ A S+L +K PDV +Y+
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN-GIIPDVVSYTC 395
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S ++ K + + M + +PN VTYN LIDAYG AE +M +
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V ++ L A S + ++ QS GI + +N + SY A EK
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ + M+K VT+ I+I R + + M I + S++ AY
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + S+ + + D + + ++ AY + + + + M+ G +PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ ++RA++ G ++ DL+ + +
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 148/346 (42%), Gaps = 14/346 (4%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C + +K + A G + NT ++ + + +Y + +KA +L + M+
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK- 524
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ D T++ILI + + + + L +M I Y++++ AY + E
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M CEPDV L A+ S + + + + ++ GI+P + L+ +
Sbjct: 585 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + +M+ M++ +T + + A + K+ L ++M S
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
++ +G +GK E + + I S + ++ + L++ A G + + E
Sbjct: 705 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE--- 761
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
VLE M G +P YR ++ + G ++ EF+ L+ + E+
Sbjct: 762 VLEWMSGAGIQPSNQMYRDII----SFGERSAGIEFEPLIRQKLES 803
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 152 MEKCYEKFQSAGIQPSI----NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E C F+ IQ + + +N+++ + + ++ + MQK+ TY+
Sbjct: 123 IELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYD 182
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I+A GRAG + L M I PS T +L+ A G +G + V + + ++
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V N ++ AY + +++ E+M+ +PD T+ ++ S G + A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 328 KE-FQDLVEKMDETCLAMKRPD 348
+ F + EK E RPD
Sbjct: 303 LDLFNSMREKRAEC-----RPD 319
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 3/331 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A E+ Q++V+ G + L++ Y ++G + AFS MK + +
Sbjct: 164 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIK 222
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA Q LL +M G+ P T+NTLIDAYGR + +
Sbjct: 223 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 282
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + AF +G+I + + P+ +N ++D+Y +
Sbjct: 283 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 342
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ ++E M+ S +IVTYN++I + + E + + + R+ P V+
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A + G +K + + + I ++ L+ G EM+ + + M
Sbjct: 403 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
Q P + MV AYS G + A++ +
Sbjct: 463 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 493
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ A +L M D G + ++F L+ AYGR+G +K F +L M+ +P
Sbjct: 235 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN-GLKP 293
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V +Y ++ + K + A+L DM + + PN YN +IDAY + + +
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM S P + T N ++ N QI E+ + + P ++N L+ +
Sbjct: 354 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 413
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ +K + + M KY T+ TY+ +I G AG L +MEYL++ M + PS
Sbjct: 414 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 473
Query: 242 CSLVRAYGHAGKPEK 256
+V AY G K
Sbjct: 474 NIMVEAYSKYGNEIK 488
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 9/301 (2%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N S+ +++ R+G A + + M P+ TY+ +I +K + L
Sbjct: 14 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M G++PN +TYN L+ RA E L +M S+ PD +T +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G M + K+ G+ T +ILL+ K G V++ + T V
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I+ + + G+L+ F M+S IKP +T +L+ A + +L +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 266 NSDIMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ + FN L+DAYGR KCF VL MQ+ G KP+ V+Y ++V A+ N
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFI----VLSEMQENGLKPNVVSYGSIVNAFCKN 308
Query: 322 G 322
G
Sbjct: 309 G 309
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L MV G N ++ LLS R+G + +LL+ M + PD TYSI
Sbjct: 67 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSI 125
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L K+ L F + +L + G
Sbjct: 126 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 185
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P V YNTLI+ Y + T +M S +PD T N + + +I +
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Q G+ P++ TFN L+D+YG+ G EK V+ MQ+ +V+Y +++AF
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ +++ AY G ++ ++ + ++ I
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 365
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
V +N L+ +E + ++ + PD V+Y T++ A G + A + Q
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 425
Query: 334 VEK 336
+ K
Sbjct: 426 MHK 428
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q EK + M + G N S+ ++++A+ ++G +A ++L+ M + D P+
Sbjct: 271 GRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPN 329
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ +I + ++ D+ L+ M + GI P+ VTYN LI +E E +
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + PD + N + A G ID ++ GI+ ++ T++ L+ G AG
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 449
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+M + + M + + + +NI+++A+ + G+ + E L + M +R
Sbjct: 450 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 6/225 (2%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN +YN +I RA + +M P+ T N + G ++ +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
++ G++P+ T+N+LL +AG + SA+++ M TY+I+ D R
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
GD K M LF + T L+ GK VL+ + N+ ++ V
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 276 FNCLVDAYGRLKCFAEMKGVLEV---MQQRGCKPDKVTYRTMVRA 317
+N L++ Y + E++G M+ R KPD +TY ++
Sbjct: 193 YNTLINGYCQT---GELEGAFSTFGQMKSRHIKPDHITYNALING 234
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ ++ N + +G+ + +++ + P+ T+N ++D + K G E +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + +TYN+++ RAG + + L M S+++ P T L
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 251 AGKPEKLGSVL-RFIDNSDIMLD---TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G + + S+ +++ N + D ++ N L G++ E VL+ + G P
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKD-GKVSIAEE---VLQSLVNAGLVP 188
Query: 307 DKVTYRTMVRAYSTNG 322
+V Y T++ Y G
Sbjct: 189 TRVIYNTLINGYCQTG 204
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 150/328 (45%), Gaps = 38/328 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKN--------------------------------- 55
+++ L++ +G+ GLFD A S L+ M+
Sbjct: 13 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 72
Query: 56 -TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ Y+ +I KA F + ++L+S+M G+ PNT +Y+TL+ Y K F
Sbjct: 73 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKF 132
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E +M C D+ T N + +G G +K + + GI+P++ ++N L
Sbjct: 133 LEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 192
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L YG A F + + MQ+ + +VTYN +I +G+ + ++ L + M+S I
Sbjct: 193 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 252
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ +T +++ +G GK ++ + + + +S + +D + F ++ AY R A K
Sbjct: 253 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 312
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L ++ +PD + T + + G
Sbjct: 313 LLHELK----RPDNIPRDTAIHILAGAG 336
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 90 VFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREVK-CL 148
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 149 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 208
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 209 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 268
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 269 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 324
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K +A + V + M+
Sbjct: 325 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMR 384
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 385 GLGYFPDSDVIALVLNAY 402
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED------------------- 128
+M + + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 59
Query: 129 CE-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
C+ PD+ N + FG + + + +G+ P+ ++
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASY 119
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 120 STLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 179
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I+P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ +
Sbjct: 180 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 239
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 240 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 282
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 40/287 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 162 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 220
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 221 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 280
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 281 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 336
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 337 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYANVVEVF 380
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+R G+ F D+ I L +++AYG+L F
Sbjct: 381 DKMRGLGY------------FPDSDVIAL-------VLNAYGKLHEF 408
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 232 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GVEID 290
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 291 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 346
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + D+ + + + + ++K + G P + ++L++YGK
Sbjct: 347 QAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSDVIALVLNAYGKLH 406
Query: 183 HFEKMSAV 190
F+K + V
Sbjct: 407 EFDKANDV 414
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A+ ++TA +S + ++A L M+ Q +V+T+S L+ C+K
Sbjct: 134 ADVYTYTAAISICVSAQQLERALELSADMQRR-GVQRNVHTHSALMNVCIKCGQLKLALD 192
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+ DM GI PN VTYNTLID YG+ + + L +M + EP T N + A
Sbjct: 193 VWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACN 252
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
SGQ T + YE+ ++AG + ++N L+ ++ KAG ++ M + +++
Sbjct: 253 TSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVI 312
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY+ +I A ++G+ + F + +P+ +T SL+ A + EK + +
Sbjct: 313 TYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELM 372
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
D V + L+ AY R + + MQ +GCKPD + Y ++
Sbjct: 373 QQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAII 423
Score = 120 bits (301), Expect = 1e-24, Method: Composition-based stats.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 17/308 (5%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ-----PDVNTYSILIKSCLKAFAFD 80
++++ ALL R+GL +A +H+ D DV TY+ I C+ A +
Sbjct: 94 DSRACAALLKELARTGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAISICVSAQQLE 153
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL---VKMLSEDCEPDVWTMN 137
+ L +DM +G++ N T++ L++ + +++L L M + P+V T N
Sbjct: 154 RALELSADMQRRGVQRNVHTHSALMNVCIKC---GQLKLALDVWEDMQRDGIVPNVVTYN 210
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ +G GQ + + + + GI+P T+N L+ + +G ++ + E M+
Sbjct: 211 TLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAA 270
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
++ +YN +I A +AGDL Q+ +R M + + S +T SL+ A +G+ +
Sbjct: 271 GHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQL- 329
Query: 258 GSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
LRF D + + + FN L+ A + + + + + E+MQQ+GC PD VTY +
Sbjct: 330 --ALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTAL 387
Query: 315 VRAYSTNG 322
+ AY G
Sbjct: 388 ISAYERGG 395
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 3/260 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC Q + A ++++ M +G N ++ L+ YG+ G +++A +L MK +P
Sbjct: 183 KCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMK-FQGIEPVT 241
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ L+ +C + + L +M G NT +YN LI A+ +A ++ T +
Sbjct: 242 RTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQ 301
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + CE V T + + A SG+ + +++ +P++ TFN L+ + +
Sbjct: 302 MVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQ 361
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+EK + E MQ+ + +VTY +I A+ R G + F+ M+++ KP + +
Sbjct: 362 WEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNA 421
Query: 244 LVRAYGHAG--KPEKLGSVL 261
++ G P++ +VL
Sbjct: 422 IIDTLWDTGCAWPQRQAAVL 441
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q E+A ++ + M +G + T+++ L+ A SG + A L E M+ +
Sbjct: 217 GKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHAL-N 275
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+Y+ LI + KA +V M QG + +TY++LI A ++ E +L L
Sbjct: 276 TTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKS---GEWQLALR 332
Query: 123 ---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ L ++C P+V T N + A Q + + +E Q G P + T+ L+ +Y
Sbjct: 333 FFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYE 392
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF---GRAGDLKQMEYLFR-------LM 229
+ G ++ + MQ + YN +ID G A +Q L R L
Sbjct: 393 RGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDTLWDTGCAWPQRQAAVLHRRASAGGLLR 452
Query: 230 RSERIKPSCVTLC 242
R+ P + LC
Sbjct: 453 RAAHAAPGYLELC 465
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 15/342 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D G + S++ LL+A R+G D A + L M++ PD+ +S LI
Sbjct: 147 ASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLVLFSNLI 205
Query: 71 KSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEM-ELTLVKMLSED 128
L+ K AL S + GI+P+ YN I AY ++ + + L L M S+
Sbjct: 206 HLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDG 265
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKM 187
PD + + L A G+ + ++ A ++P ++ FNI+L++YG+ +
Sbjct: 266 VAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREA 325
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----------IKPS 237
+ M++ + ++VTYN ++ +G AG + +LF LMRS IKP+
Sbjct: 326 DRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPN 385
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +++ YG + + EK GS+++ + + I + + ++ ++ + + + E
Sbjct: 386 VVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFE 445
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
+++ G + D V Y+TMV AY G+ + +K DL + D
Sbjct: 446 KLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 145/315 (46%), Gaps = 14/315 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + +S++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 257 LLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAY 316
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSED--- 128
+ + L M G+ P+ VTYNT++ YG A +F E L++ + D
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 129 -----CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+P+V T N + +G S + + + Q+ GIQP+ T++ +L + KAG
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGK 436
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + E +++ V Y ++ A+ RAG + Q + L ++ P
Sbjct: 437 LDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA--- 493
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ +AG+ E+ + R ++ + DT + ++D + + + + V + M++ G
Sbjct: 494 -IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
Query: 304 CKPDKVTYRTMVRAY 318
PD T + A+
Sbjct: 553 SLPDSETIAITMNAH 567
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 51/324 (15%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L++S +A LL +M +G+ P+ +Y+TL+ A RA + LT + ++
Sbjct: 131 YNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHL-DHALTFLPLM 189
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFNILLDSY----- 178
+D PD+ + + G + + + +AGI+P + +N + +Y
Sbjct: 190 EDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDL 249
Query: 179 ---------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------Y 206
G A E S ++ + + V+ +
Sbjct: 250 LRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVF 309
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA---GKPEKLGSVLRF 263
NIV++A+G+ ++ + LF MR + PS VT +++R YG A G+ L ++R
Sbjct: 310 NIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRS 369
Query: 264 I--DNSD-----IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
D SD I + V +N ++ YG+ + +++ MQ G +P+ +TY T++
Sbjct: 370 AASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILS 429
Query: 317 AYSTNGMKNHA-KEFQDLVEKMDE 339
+ G + A K F+ L E E
Sbjct: 430 IWVKAGKLDRAGKLFEKLREAGTE 453
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 48/311 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD---- 58
G+ +A LF +M G + ++ +L YG +GLF +A L M++
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 59 -----CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+P+V TY+ +I K+ +K +L+ DM GI+PN +TY+T++
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTIL-------- 428
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+W +G++D K +EK + AG + +
Sbjct: 429 ------------------SIWV---------KAGKLDRAGKLFEKLREAGTEIDPVLYQT 461
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++ +Y +AG + ++ ++ V I AG +++ +LFR
Sbjct: 462 MVVAYERAGLVSQSKRLLHDLKDSED----VPKETAIKILANAGRVEEAAWLFRRAADAG 517
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
++ + + + + V + + + D+ ++A+G+LK F +
Sbjct: 518 DVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETIAITMNAHGKLKEFDKAA 577
Query: 294 GVLEVMQQRGC 304
+ M++ GC
Sbjct: 578 ALYRAMREEGC 588
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 7/230 (3%)
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+ YN L+ + RA M L++M PD ++ + L A +G +D
Sbjct: 129 IPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAG 217
+ + P + F+ L+ + G K A+ ++ + YN I A+ ++
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 218 DLKQM-EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDT 273
L+ L M S+ + P + ++ A G+ L +V F + + D
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGR--HLAAVSLFTHMRAVARVKPDL 306
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
FN +++AYG+L E + M++ G P VTY TM+R Y G+
Sbjct: 307 SVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGL 356
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
S ++ YN+++ + RAG L+ L MR + P + +L+ A AG + +
Sbjct: 125 SALLIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALT 184
Query: 260 VLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
L +++ + D V F+ L+ DA L F+ ++G G KPD Y
Sbjct: 185 FLPLMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAA------GIKPDLKAYN 238
Query: 313 TMVRAY 318
+ AY
Sbjct: 239 AAIAAY 244
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 20 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYS 78
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 79 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 138
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 139 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 198
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 199 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 258
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 259 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 294
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 63 SEMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 279
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 178
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 179 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 238
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 239 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 294
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 295 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 338
Query: 243 SLVRAYGHAGKPEKLGSVL 261
+R G+ + VL
Sbjct: 339 DKMRGLGYFPDSNVIAVVL 357
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 15/342 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D G + S++ LL+A R+G D A + L M++ PD+ +S LI
Sbjct: 147 ASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLVLFSNLI 205
Query: 71 KSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEM-ELTLVKMLSED 128
L+ K AL S + GI+P+ YN I AY ++ + + L L M S+
Sbjct: 206 HLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDG 265
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKM 187
PD + + L A G+ + ++ A ++P ++ FNI+L++YG+ +
Sbjct: 266 VAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREA 325
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----------IKPS 237
+ M++ + ++VTYN ++ +G AG + +LF LMRS IKP+
Sbjct: 326 DRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPN 385
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +++ YG + + EK GS+++ + + I + + ++ ++ + + + E
Sbjct: 386 VVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFE 445
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
+++ G + D V Y+TMV AY G+ + +K DL + D
Sbjct: 446 KLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 145/315 (46%), Gaps = 14/315 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + +S++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 257 LLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAY 316
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSED--- 128
+ + L M G+ P+ VTYNT++ YG A +F E L++ + D
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 129 -----CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+P+V T N + +G S + + + Q+ GIQP+ T++ +L + KAG
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGK 436
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + E +++ V Y ++ A+ RAG + Q + L ++ P
Sbjct: 437 LDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA--- 493
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ +AG+ E+ + R ++ + DT + ++D + + + + V + M++ G
Sbjct: 494 -IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
Query: 304 CKPDKVTYRTMVRAY 318
PD T + A+
Sbjct: 553 SLPDSETIAITMNAH 567
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 51/324 (15%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L++S +A LL +M +G+ P+ +Y+TL+ A RA + LT + ++
Sbjct: 131 YNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHL-DHALTFLPLM 189
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFNILLDSY----- 178
+D PD+ + + G + + + +AGI+P + +N + +Y
Sbjct: 190 EDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDL 249
Query: 179 ---------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------Y 206
G A E S ++ + + V+ +
Sbjct: 250 LRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVF 309
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA---GKPEKLGSVLRF 263
NIV++A+G+ ++ + LF MR + PS VT +++R YG A G+ L ++R
Sbjct: 310 NIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRS 369
Query: 264 I--DNSD-----IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
D SD I + V +N ++ YG+ + +++ MQ G +P+ +TY T++
Sbjct: 370 AASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILS 429
Query: 317 AYSTNGMKNHA-KEFQDLVEKMDE 339
+ G + A K F+ L E E
Sbjct: 430 IWVKAGKLDRAGKLFEKLREAGTE 453
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 123/304 (40%), Gaps = 15/304 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD---- 58
G+ +A LF +M G + ++ +L YG +GLF +A L M++
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 59 -----CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+P+V TY+ +I K+ +K +L+ DM GI+PN +TY+T++ + +A
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGK 436
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
K+ E D + A+ +G + ++ + + P I
Sbjct: 437 LDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKI 496
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L AG E+ + + Y ++ID F ++ + + +F MR
Sbjct: 497 L----ANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD-IMLDTVFFNCLVDAYGRLKCFAEM 292
P T+ + A+G + +K ++ R + + D V F +V G K F +
Sbjct: 553 SLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQ-MVSLLGAQKDFDAL 611
Query: 293 KGVL 296
+ +L
Sbjct: 612 EALL 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 7/230 (3%)
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+ YN L+ + RA M L++M PD ++ + L A +G +D
Sbjct: 129 IPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAG 217
+ + P + F+ L+ + G K A+ ++ + YN I A+ ++
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 218 DLKQM-EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDT 273
L+ L M S+ + P + ++ A G+ L +V F + + D
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGR--HLAAVSLFTHMRTVARVKPDL 306
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
FN +++AYG+L E + M++ G P VTY TM+R Y G+
Sbjct: 307 SVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGL 356
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
S ++ YN+++ + RAG L+ L MR + P + +L+ A AG + +
Sbjct: 125 SALLIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALT 184
Query: 260 VLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
L +++ + D V F+ L+ DA L F+ ++G G KPD Y
Sbjct: 185 FLPLMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAA------GIKPDLKAYN 238
Query: 313 TMVRAY 318
+ AY
Sbjct: 239 AAIAAY 244
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 15/342 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D G + S++ LL+A R+G D A + L M++ PD+ +S LI
Sbjct: 147 ASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDA-VAPDLVLFSNLI 205
Query: 71 KSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEM-ELTLVKMLSED 128
L+ K AL S + GI+P+ YN I AY ++ + + L L M S+
Sbjct: 206 HLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDG 265
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKM 187
PD + + L A G+ + ++ A ++P ++ FNI+L++YG+ +
Sbjct: 266 VAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREA 325
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----------IKPS 237
+ M++ + ++VTYN ++ +G AG + +LF LMRS IKP+
Sbjct: 326 DRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPN 385
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +++ YG + + EK GS+++ + + I + + ++ ++ + + + E
Sbjct: 386 VVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFE 445
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
+++ G + D V Y+TMV AY G+ + +K DL + D
Sbjct: 446 KLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 145/315 (46%), Gaps = 14/315 (4%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L M +G + +S++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 257 LLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAY 316
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME--LTLVKMLSED--- 128
+ + L M G+ P+ VTYNT++ YG A +F E L++ + D
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 129 -----CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+P+V T N + +G S + + + Q+ GIQP+ T++ +L + KAG
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGK 436
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + E +++ V Y ++ A+ RAG + Q + L ++ P
Sbjct: 437 LDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA--- 493
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ +AG+ E+ + R ++ + DT + ++D + + + + V + M++ G
Sbjct: 494 -IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
Query: 304 CKPDKVTYRTMVRAY 318
PD T + A+
Sbjct: 553 SLPDSETIAITMNAH 567
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 51/324 (15%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L++S + LL +M +G+ P+ +Y+TL+ A RA + LT + ++
Sbjct: 131 YNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHL-DHALTFLPLM 189
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFNILLDSY----- 178
+D PD+ + + G + + + +AGI+P + +N + +Y
Sbjct: 190 EDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDL 249
Query: 179 ---------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------Y 206
G A E S ++ + + V+ +
Sbjct: 250 LRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVF 309
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA---GKPEKLGSVLRF 263
NIV++A+G+ ++ + LF MR + PS VT +++R YG A G+ L ++R
Sbjct: 310 NIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRS 369
Query: 264 I--DNSD-----IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
D SD I + V +N ++ YG+ + +++ MQ G +P+ +TY T++
Sbjct: 370 AASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILS 429
Query: 317 AYSTNGMKNHA-KEFQDLVEKMDE 339
+ G + A K F+ L E E
Sbjct: 430 IWVKAGKLDRAGKLFEKLREAGTE 453
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 48/311 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD---- 58
G+ +A LF +M G + ++ +L YG +GLF +A L M++
Sbjct: 317 GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSD 376
Query: 59 -----CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+P+V TY+ +I K+ +K +L+ DM GI+PN +TY+T++
Sbjct: 377 RGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTIL-------- 428
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+W +G++D K +EK + AG + +
Sbjct: 429 ------------------SIWV---------KAGKLDRAGKLFEKLREAGTEIDPVLYQT 461
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++ +Y +AG + ++ ++ V I AG +++ +LFR
Sbjct: 462 MVVAYERAGLVSQSKRLLHDLKDSED----VPKETAIKILANAGRVEEAAWLFRRAADAG 517
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
++ + + + + V + + + D+ ++A+G+LK F +
Sbjct: 518 DVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETIAITMNAHGKLKEFDKAA 577
Query: 294 GVLEVMQQRGC 304
+ M++ GC
Sbjct: 578 ALYRAMREEGC 588
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 7/230 (3%)
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+ YN L+ + R M L++M PD ++ + L A +G +D
Sbjct: 129 IPYNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAG 217
+ + P + F+ L+ + G K A+ ++ + YN I A+ ++
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 218 DLKQM-EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDT 273
L+ L M S+ + P + ++ A G+ L +V F + + D
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGR--HLAAVSLFTHMRAVARVKPDL 306
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
FN +++AYG+L E + M++ G P VTY TM+R Y G+
Sbjct: 307 SVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGL 356
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 5/334 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K E+++ M +G + ++ LL+A ++G+ D+A+ + E MK C PD
Sbjct: 195 RSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQN-YCDPDA 253
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ KA K +LL +M ++G N + YNT+I+A G+ KM E L K
Sbjct: 254 YTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSK 313
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ DC P+ +T + L GQ+ + + + +P ++ L+ + K+GH
Sbjct: 314 MIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRP---VYSYLIKALCKSGH 370
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ +V M H + +++A A + L +M + I
Sbjct: 371 ASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNM 430
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ A G + + S+ + + ++ D +N ++ ++GR+ + + E M+
Sbjct: 431 IFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGS 490
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
CKPD VTY +M+ NG + A F+D+ EK
Sbjct: 491 CKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEK 524
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + K L + MV EGC N ++ ++ A G++ + D+A +L M + DC+
Sbjct: 262 MSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIES-DCR 320
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYSI LIK+ K+ + ++
Sbjct: 321 PNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCR 380
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + + ++++A A+ E L M + DV N A G Q
Sbjct: 381 MWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQ 440
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ M Y+ ++ G+ P + T+NI++ S+G+ G +K S + E M+ +VTYN
Sbjct: 441 VSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNS 500
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T L+ +G + K + S+ +
Sbjct: 501 MINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQG 560
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + V +N L+D R E E ++Q+G PD +TY + R S
Sbjct: 561 CIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLES 611
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 149/367 (40%), Gaps = 33/367 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++A+++F+ M CD + ++T L+ G++G K SLLE M + C
Sbjct: 228 LAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMV-SEGCVL 286
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID--------------- 106
++ Y+ +I++ K D+ +LS M RPN TY+ ++D
Sbjct: 287 NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEIL 346
Query: 107 -----------------AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
A ++ +E +M + + D + L A N+ +
Sbjct: 347 DICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKT 406
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
GI + +N++ + GK MS++ + M+ + TYNI+
Sbjct: 407 TEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIM 466
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I +FGR G + + LF M KP VT S++ G G ++ + + +
Sbjct: 467 ISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGY 526
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D ++ L++ +G+ + + M +GC P+ VTY ++ G A +
Sbjct: 527 DPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHK 586
Query: 330 FQDLVEK 336
F + +++
Sbjct: 587 FYETLKQ 593
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 74 LKAFAFDKVQAL----LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+KA A D AL + S G R + +YN ++ + + L+ + D
Sbjct: 90 MKALAPDTSLALSFFRFAATSLPGFRHDAFSYNRILVLLFSNRADPAEAMRLIAEMERDG 149
Query: 130 EP-DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P ++ T+N + G + +C + G++ + T+ L+ ++ ++ K
Sbjct: 150 VPGNISTVNLLV------GMGVEVGRCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGF 203
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V E M++ Y I YN++++A +AG + Q +F M+ P T L+R
Sbjct: 204 EVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMS 263
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AGK K S+L + + +L+ + +N +++A G+ K E +L M + C+P++
Sbjct: 264 GKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQ 323
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDL 333
TY M+ ST G + E D+
Sbjct: 324 FTYSIMLDVLSTGGQLHRLNEILDI 348
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 128/316 (40%), Gaps = 38/316 (12%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY L+++ L++ K + M +G + + YN L++A +A M + M
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDM 244
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
C+PD +T +R G +G+ E+ S G ++ +N ++++ GK
Sbjct: 245 KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMV 304
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF--------RLMRSERIKP 236
++ ++ M + TY+I++D G L ++ + R + S IK
Sbjct: 305 DEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKA 364
Query: 237 SCVT------------------------LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
C + S++ A +A K + +L + I D
Sbjct: 365 LCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTD 424
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N + A G+LK + M + + M+ G PD TY M+ ++ G+ + A E +
Sbjct: 425 VGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFE 484
Query: 333 LVEKMDETCLAMKRPD 348
+E D +C +PD
Sbjct: 485 EME--DGSC----KPD 494
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ Q A L M G A+ S++ LL+A R+G D A + L M+ PD+
Sbjct: 130 RAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPLMEADA-VSPDL 188
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+S LI L+ + AL S + GIRP+ YN I AY ++ + + + L+
Sbjct: 189 VLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLH 248
Query: 124 MLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKA 181
+ D PD + + L A G+ + ++ A ++P ++ FNI+L++YG+
Sbjct: 249 DIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQL 308
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM-------RSERI 234
+ + M++ ++VTYN ++ +G AG + +LF LM +
Sbjct: 309 DLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNGSSV 368
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP+ VT +++ +G + + EK GS++R + + I + V ++ ++ + +
Sbjct: 369 KPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRAAK 428
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK----EFQDLVEKMD-ETCLAM 344
+ E + + G + D V Y+TMV AY G+ + AK E +D E + ET +++
Sbjct: 429 LFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISI 483
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 10/312 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + +G + +S++ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 246 LLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAY 305
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS------- 126
+ + L M G+ P+ VTYNT++ YG A +F E M S
Sbjct: 306 GQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNG 365
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+P+V T N + G S + + Q+ GIQP+ T++ +L + KAG ++
Sbjct: 366 SSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDR 425
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + E + + V Y ++ A+ RAG + Q + L R ++ T S++
Sbjct: 426 AAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISIL- 484
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+AG+ E+ + R N+ + D ++D + + + + V + M++ G P
Sbjct: 485 --ANAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGHLP 542
Query: 307 DKVTYRTMVRAY 318
D T T + AY
Sbjct: 543 DSETIATAMNAY 554
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 53/323 (16%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L+++ +A LL +M +G+ + +Y+TL+ A RA + LT + ++
Sbjct: 121 YNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHL-DHALTFLPLM 179
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY------ 178
D PD+ + + G + + ++AGI+P + +N + +Y
Sbjct: 180 EADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLL 239
Query: 179 --------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------YN 207
G A E S ++ + + V+ +N
Sbjct: 240 RDAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFN 299
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI--- 264
IV++A+G+ ++ + LF MR + PS VT +++R YG AG G +
Sbjct: 300 IVLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAG---LFGEAVHLFGLM 356
Query: 265 -------DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ S + + V +N ++ +G+ + ++ MQ G +P+ VTY T++
Sbjct: 357 CSSASDGNGSSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSI 416
Query: 318 YSTNG-MKNHAKEFQDLVEKMDE 339
+ G + AK F+ L+E E
Sbjct: 417 WVKAGKLDRAAKLFEKLLESGTE 439
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM------KNT 56
G+ +A LF +M G + ++ +L YG +GLF +A L M N
Sbjct: 306 GQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNG 365
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
+P+V TY+ +I K+ +K +L+ DM GI+PN VTY+T++ + +A
Sbjct: 366 SSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDR 425
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ--SAGIQPSINTFNIL 174
K+L E D + A+ +G + ++ + + + GI P+ +IL
Sbjct: 426 AAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGI-PTETAISIL 484
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
AG E+ + + + ++D F + + + +F MR
Sbjct: 485 ----ANAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGH 540
Query: 235 KPSCVTLCSLVRAYG 249
P T+ + + AYG
Sbjct: 541 LPDSETIATAMNAYG 555
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 41/231 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA L + M G N +++ +LS + ++G D+A L E + +
Sbjct: 383 GKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRAAKLFEKLLES------ 436
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
G + V Y T++ AY RA + ++ +
Sbjct: 437 ------------------------------GTEIDPVLYQTMVVAYERAGLVSQAK---- 462
Query: 123 KMLSEDCEP-DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++L E +P + + N+G+++ + + + G + ++D + K
Sbjct: 463 RLLRELKDPAEGIPTETAISILANAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKN 522
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+ V + M+K + T ++A+G+ + + L+R R E
Sbjct: 523 RRHRSVVEVFDEMRKLGHLPDSETIATAMNAYGKLKEFDKAAMLYRASREE 573
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
S +V YN+++ A RAG L+ L MR + + +L+ A AG + +
Sbjct: 115 SALLVPYNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALT 174
Query: 260 VLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
L ++ + D V F+ L+ DA L F+ ++ G +PD Y
Sbjct: 175 FLPLMEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAA-------GIRPDLKAYN 227
Query: 313 TMVRAYSTNGMKNHAKEF 330
+ AY + + AK
Sbjct: 228 AAIAAYCKSDLLRDAKRL 245
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A +LF+ +++ G + + + ++ AY R+GL +A LL +K+ + P
Sbjct: 419 KAGKLDRAAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTE 478
Query: 64 NTYSILIKSCL---KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
SIL + A+ F + ++T +R +V + ++D + + + +
Sbjct: 479 TAISILANAGRVEEAAWLFRRA------VNTGEVRDPSV-HRAMMDLFAKNRRHRSVVEV 531
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M PD T+ + A+G + D Y + G S +L G
Sbjct: 532 FDEMRKLGHLPDSETIATAMNAYGKLKEFDKAAMLYRASREEGCVFSDRVHFQMLSLLGA 591
Query: 181 AGHFEKMSAVMEYMQ 195
FE + +++ +
Sbjct: 592 QKDFEALESLVSELS 606
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 7/338 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M D+G N +++ LL AY R+G + ++ +L MK Q D YS L+
Sbjct: 142 ADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRR-GIQLDTAGYSTLV 200
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + K L+ +M G+ + YN LID +G+ A+ KM +E +
Sbjct: 201 RLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIK 260
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R G + + + Q G+ P F ++ G+ G ++++ +
Sbjct: 261 PDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKL 320
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ + Y +++D +G+ G + +++E + S C L AY
Sbjct: 321 FDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQ 380
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +VL+ ++ I + V N L++A+ E V + ++ G PD VT
Sbjct: 381 QGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVT 440
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Y T+++ + K+F+ + E +E A PD
Sbjct: 441 YTTLMKGFM------RVKKFEKVSEVYNEMERAGCTPD 472
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 148/357 (41%), Gaps = 42/357 (11%)
Query: 7 QPEKAHELFQA------MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
QP + +L + M G + ++ L+ A R+G +A +LL M++ +
Sbjct: 62 QPHASSDLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHL-GLR 120
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-------M 113
PD Y+ L++ L LL M+ G+ N TY L+DAY RA +
Sbjct: 121 PDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWV 180
Query: 114 FAEMEL-----------TLVKMLSED-----------------CEPDVWTMNCTLRAFGN 145
EM+ TLV++ ++ E DV N + FG
Sbjct: 181 LGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGK 240
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
GQ+ + +EK ++ GI+P I T+N L+ + + G+ ++ MQ+
Sbjct: 241 YGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKI 300
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ +I G G +++ LF MR+ +K S LV YG G+ + +
Sbjct: 301 FMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALK 360
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ L F L +AY + + VL++M+ G +P+ V ++ A+ST G
Sbjct: 361 AEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAG 417
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P Y+ LI++ +A + +ALL +M G+RP+ YN L++ +
Sbjct: 85 RPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADR 144
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M + + T L A+ +G+++ + + GIQ ++ L+ Y
Sbjct: 145 LLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYR 204
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++K + ++ MQ+ + YN +ID FG+ G L LF MR+E IKP
Sbjct: 205 DNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIA 264
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+R + G ++ + + D F ++ G + E+K + + M
Sbjct: 265 TWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKM 324
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ RG K Y +V Y G A E
Sbjct: 325 RNRGLKESGAVYAVLVDIYGQYGRFRDAHE 354
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 7/237 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q A LF+ M EG + ++ AL+ + R G +A M+ PD
Sbjct: 239 GKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQE-EGMYPD 297
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +D+++ L M +G++ + Y L+D YG+ F + +
Sbjct: 298 PKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVA 357
Query: 123 KMLSEDCE--PDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +E+ P ++ C L A+ G + + ++ GI+P++ N+L++++
Sbjct: 358 ALKAEELHLSPSIF---CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFS 414
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
AG + AV ++++ S +VTY ++ F R +++ ++ M P
Sbjct: 415 TAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTP 471
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ +LF M + G + + L+ YG+ G F A + +K +
Sbjct: 308 LGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALK-AEELHL 366
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +L + + ++ +L M +GI PN V N LI+A+ A E
Sbjct: 367 SPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVF 426
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ PDV T ++ F + + + + Y + + AG P +L D+
Sbjct: 427 QHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKAREMLHDA 482
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 152/313 (48%), Gaps = 2/313 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G +NT + L+ AY +S ++A L MK Q TY+IL+ + +
Sbjct: 373 MEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEK-SLQATTTTYNILMDAYSRRL 431
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTM 136
+ V++LL +M GIRP+ +YN LI AYGR KM + E ++M + +P +
Sbjct: 432 QTEVVESLLLEMQDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSY 491
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L A+ +G + Y + G++P++ T+ LLD+ +AG EK+ + M
Sbjct: 492 NALLFAYAANGLHEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETWKTMVD 551
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+ T V +++VID + G Q+ + +KP+ +T L+ AYG G+ K
Sbjct: 552 EKFGGTRVIFHMVIDCLAKHGLYLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYK 611
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
L +L+ + ++ D++ + ++ AY R++ F+ + M + G PD +Y+ ++
Sbjct: 612 LPQLLKEMTALELKPDSITYCTMIYAYARVRDFSRAFYYHKQMVRNGQIPDPRSYKKLLN 671
Query: 317 AYSTNGMKNHAKE 329
+ + K+
Sbjct: 672 TLDVKAARKNIKD 684
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 50/387 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+C + E+ + E + A +SA +D A+ + E M+ + QP
Sbjct: 251 LGRCDMADVVLEIVARLPLERDFREVVLYNAAISAVAYCRRYDGAWEIFELMEKN-NVQP 309
Query: 62 DVNTYSILI----KSCLKA----------------FAFDKVQALL--------------- 86
D T +I++ KS + A ++FD AL+
Sbjct: 310 DHGTSAIMLNIMKKSKVSAKDAWEFFKRMNRKGVNWSFDVGAALINIFCSDGLKKEALII 369
Query: 87 -SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
S+M +GI NT Y TL+ AY ++ E E V+M + + T N + A+
Sbjct: 370 QSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSR 429
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME----YMQKYHYSW 201
Q + +E + Q GI+PS ++N L+ +YG+ +KMS E M++
Sbjct: 430 RLQTEVVESLLLEMQDLGIRPSARSYNCLISAYGRQ---KKMSGKAENAFLRMKRDGIKP 486
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+YN ++ A+ G ++ ++ M+ E +KP+ T +L+ AG EKL
Sbjct: 487 LSSSYNALLFAYAANGLHEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETW 546
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + V F+ ++D + + +++ V+ + G KP +TY ++ AY
Sbjct: 547 KTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRG 606
Query: 322 GMKNHAKEFQDLVEKMDETCLAMKRPD 348
G H K Q L E T L +K PD
Sbjct: 607 G--QHYKLPQLLKEM---TALELK-PD 627
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + EK E ++ MVDE F ++ + GL+ + ++ +P
Sbjct: 533 LRRAGDTEKLMETWKTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDVIYEFGKM-GLKP 591
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+IL+ + + K+ LL +M+ ++P+++TY T+I AY R + F+
Sbjct: 592 TVMTYNILMNAYGRGGQHYKLPQLLKEMTALELKPDSITYCTMIYAYARVRDFSRAFYYH 651
Query: 122 VKMLSEDCEPD 132
+M+ PD
Sbjct: 652 KQMVRNGQIPD 662
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 141/284 (49%), Gaps = 2/284 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++AHEL + M ++ S+ +++A+ + + A LL MK P PD
Sbjct: 307 GRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPD 366
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ + C KA +++ LL++ QG++P+ V+YNT++ A GRA + + L L
Sbjct: 367 LISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQA-LDLF 425
Query: 123 KMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ E PD + N + A + + + + ++ I P++ ++ I +D+ G+A
Sbjct: 426 GMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRA 485
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +E+ +ME M+ + TY +DA R G + ++ L M + ++P+ V+
Sbjct: 486 GEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSY 545
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ A GK ++ +VL + + LD+V + + GR
Sbjct: 546 TIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGR 589
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 5/322 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK Q + A ELF + D G N S+ + A GR+G+ D+A LL M+ +P
Sbjct: 271 LGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL-SVRP 329
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D +Y+ ++ + K + LL++M G+ P+ ++YNT + +A +
Sbjct: 330 DSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATEL 389
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + L + +PDV + N + A G +G+ + + G+ P +FN + + +
Sbjct: 390 LTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNR 449
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A ++ ++ M+ + + +Y I +DA GRAG+ ++ L M + + T
Sbjct: 450 ALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHT 509
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + A G +++ +L +D + + V + +DA R+ + VLE M
Sbjct: 510 YTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMV 569
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
QRG + D V+YRT A ST G
Sbjct: 570 QRGLRLDSVSYRT---ALSTAG 588
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ +A ++L+ P + DV +++ IK+C +A + + +L +M +G+RP+ V++N
Sbjct: 210 WTRALTVLD----APLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFN 265
Query: 103 TLIDAYGRA-------KMFAEME----------------------------LTLVKMLSE 127
T +DA G+A ++F E+E L +M
Sbjct: 266 TAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL 325
Query: 128 DCEPDVWTMNCTLRAFGNSGQID-TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD + N + AF Q +E E ++ G+ P + ++N + KAG +E+
Sbjct: 326 SVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWER 385
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ ++ +V+YN V+ A GRAG+ Q LF +M + P V+ + +
Sbjct: 386 ATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMH 445
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A A K + +LR ++ I + + VDA GR + ++E M+ RG
Sbjct: 446 ACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPA 505
Query: 307 DKVTY 311
+ TY
Sbjct: 506 NVHTY 510
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 6/280 (2%)
Query: 41 GLFDKAFSLLEHMKNTPDC--QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
G KA LL + D D + ++ +C++ + + L+ + I +
Sbjct: 170 GRLGKAVDLLVSLSEEEDGLHAIDRALVNFVLYNCMRRRDWTRA---LTVLDAPLIEVDV 226
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
V + I A G+A+ + E L +M + PD+ + N + A G +GQ D + + +
Sbjct: 227 VGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTE 286
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ G P++ ++N + + G+AG ++ ++ MQ V+YN V+ AF +
Sbjct: 287 IEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQ 346
Query: 219 LK-QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
K +E L + + + P ++ + + AG+ E+ +L + D V +N
Sbjct: 347 WKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYN 406
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
++ A GR + + + +M++ G PD+V++ T + A
Sbjct: 407 TVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHA 446
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
E DV ++A G + + + Q+ G++P + +FN +D+ GKAG ++
Sbjct: 223 EVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALE 282
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ ++ + ++ +V+YN I A GRAG + + L R M+ ++P V+ +++ A+
Sbjct: 283 LFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFA 342
Query: 250 HAGKPEKLGSVLRFI----DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
K + + L + + + D + +N + + + +L +G +
Sbjct: 343 ---KKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQ 399
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
PD V+Y T++ A G A DL M+E +A R F
Sbjct: 400 PDVVSYNTVMHACGRAGEYLQA---LDLFGMMEEVGVAPDRVSF 440
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L +D I +D V F + A G+ + + E GVL MQ RG +PD V++ T + A
Sbjct: 213 ALTVLDAPLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALG 272
Query: 320 TNGMKNHAKEF 330
G + A E
Sbjct: 273 KAGQYDLALEL 283
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 3/314 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+PD + Y+ LI + +A +
Sbjct: 151 ARNDIYGMMIQLHARHNQVDQARGLFFEMQEW-RCKPDADIYNSLINAHARAGLWRWAIN 209
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ DM I P+ TYN +++A G A + + KM+ PD+ T N L AF
Sbjct: 210 IMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFK 269
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM--QKYHYSWT 202
N Q +E + A I P T NI++ K G ++ M ++ S
Sbjct: 270 NGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPD 329
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTY +I ++ G ++ + +F +M +E +KP+ V+ +L+ AY G + + +
Sbjct: 330 VVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFK 389
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + D V + L++AYGR + + V M++ CKP+KV+Y ++ AY + G
Sbjct: 390 LLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAG 449
Query: 323 MKNHAKEFQDLVEK 336
M A +EK
Sbjct: 450 MFKEAISLLHEMEK 463
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 36/318 (11%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C Q E +F MV EG N S+ ALL AY G+ +AF + + +K +PDV
Sbjct: 343 CGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQN-GLRPDVV 401
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ L+ + ++ +K + + ++M +PN V+YN LIDAYG A MF E L +M
Sbjct: 402 SYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEM 461
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV +++ L A G Q ++ E + GI+ +I +N + SY G +
Sbjct: 462 EKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDY 521
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
EK + M + + VTYNI+I + G + F M RI
Sbjct: 522 EKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIP--------- 572
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
L ++ L+ +Y + AE + M+ GC
Sbjct: 573 --------------------------LTKEVYSSLICSYVKQDKLAEAESTFINMKASGC 606
Query: 305 KPDKVTYRTMVRAYSTNG 322
PD +TY M++AY+ +G
Sbjct: 607 FPDVLTYTAMIQAYTDHG 624
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 165/353 (46%), Gaps = 38/353 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q ++A LF M + C + + +L++A+ R+GL+ A ++++ M P TY
Sbjct: 168 QVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAA-IPPSRATY 226
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMFAEM--- 117
+ ++ +C A + K L M G+ P+ VT+N ++ A Y +A + EM
Sbjct: 227 NNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKG 286
Query: 118 -------------------------ELTLVKMLSE---DCEPDVWTMNCTLRAFGNSGQI 149
+ L+ + E C PDV T + ++ GQ+
Sbjct: 287 ANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQV 346
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + ++ + G++P+I ++N LL +Y G + + + +++ +V+Y +
Sbjct: 347 ENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTL 406
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++A+GR+ ++ +F MR KP+ V+ +L+ AYG AG ++ S+L ++ I
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGI 466
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
D V + L+ A GR + ++ VLE + RG + + V Y + + +Y + G
Sbjct: 467 PPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFG 519
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ SG + A + MKN + + Y ++I+ + D+ + L
Sbjct: 118 RNFPLLIREMAFSGSLEHAVYVFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFF 177
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ YN+LI+A+ RA ++ + ML P T N + A G +G
Sbjct: 178 EMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAG 237
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ +K G+ P + T NI+L ++ + K + E M+ + + T N
Sbjct: 238 NWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLN 297
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
IVI + G L MR +R++ P VT S++ +Y G+ E +V +
Sbjct: 298 IVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMV 357
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + V +N L+ AY E G+ ++++Q G +PD V+Y T++ AY +
Sbjct: 358 AEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPE 417
Query: 326 HAKE 329
A+E
Sbjct: 418 KARE 421
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E+F M C N S+ AL+ AYG +G+F +A SLL M+ PD
Sbjct: 411 GRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKD-GIPPD 469
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL- 121
V + S L+ +C + K+ +L +GI N V YN+ I +Y F + E L
Sbjct: 470 VVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSY---LSFGDYEKALK 526
Query: 122 --VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M++ + PD T N + G+ K +E I + ++ L+ SY
Sbjct: 527 LYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYV 586
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K + + M+ ++TY +I A+ G + LF+ M I P +
Sbjct: 587 KQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAI 646
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
SL+ A + ++ +++F+ + I L+
Sbjct: 647 ICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLN 679
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 7/316 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C+Q K + +A G + N ++ + + +Y G ++KA L M + + PD
Sbjct: 481 GRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMAS-NVNPD 539
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K + + DM I Y++LI +Y + AE E T +
Sbjct: 540 AVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFI 599
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C PDV T ++A+ + G ++ +++ + I P + L+++ K
Sbjct: 600 NMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGN 659
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ +M++M Y +I + D K + + S S L
Sbjct: 660 QYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSISVGKLN 719
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVM 299
L+ G GK E + + + +S + + L+ A G+ + + E VL+ M
Sbjct: 720 YLLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWRKYVE---VLQWM 776
Query: 300 QQRGCKPDKVTYRTMV 315
+ G +P Y+ ++
Sbjct: 777 EDAGVRPTLYMYQNVL 792
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 3/171 (1%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ + +++ + + ++ + MQ++ YN +I+A RAG + +
Sbjct: 154 DIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDD 213
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M I PS T ++V A G AG +K + + + + + D V N ++ A+
Sbjct: 214 MLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQ 273
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ + G E+M+ PD T ++ G A DL+ M E
Sbjct: 274 YTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDA---VDLLNSMRE 321
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 156/331 (47%), Gaps = 4/331 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +LF+ M + GC T +F L+ YG +G ++A LLE +++ +P+ TY+I
Sbjct: 100 KEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDG-GVKPNQRTYNI 158
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ ++ ++ M G++P+ VTYNTL AY E +++ML+
Sbjct: 159 LVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR 218
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + + G + + + + G+ P++ FN L+ + E +
Sbjct: 219 VTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVD 278
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M++ +VT++ +++A+ AG + + + +F M I+P L + Y
Sbjct: 279 EVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGY 338
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+PEK S+L + + + V ++ + V E M + G P+
Sbjct: 339 VRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNL 398
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY T++ Y G + ++L++ M+E
Sbjct: 399 KTYETLIWGY---GEAKQPLKAEELLQVMEE 426
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 35/361 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
++GK K P +AH +F +++DEG ++T L++A R LF L+ ++ P
Sbjct: 23 LIGKGK-PREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKP 81
Query: 58 D-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQALL 86
D C+P +T++ LIK A ++ LL
Sbjct: 82 DSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLL 141
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ G++PN TYN L+ A+ + E + KM++ +PD T N RA+
Sbjct: 142 EFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEK 201
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ E+ + + + P+ T +I+++ Y K G+ S + M++ + +
Sbjct: 202 GETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVF 261
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I F D + ++ + LM ++P VT +++ A+ AG+ +K + +
Sbjct: 262 NSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVK 321
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
++I D F+ L Y R + + +L M++ G P+ V T++ + + G H
Sbjct: 322 AEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEH 381
Query: 327 A 327
A
Sbjct: 382 A 382
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ G +P++ T+ L+ + + F+ + ++ +++ + +N +I+AF
Sbjct: 36 FNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSE 95
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
+G++K+ LFR M+ KP+ T +L++ YG+AGK E+ +L F+ + + +
Sbjct: 96 SGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRT 155
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+N LV A+ + E ++ M G +PD VTY T+ RAY+ G A+E
Sbjct: 156 YNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEM 210
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ ++ + + +G +P +TY TL+ A R K+F ++++++S
Sbjct: 31 EAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFK----SILRLIS-------------- 72
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
K + G++P FN +++++ ++G+ ++ + M++
Sbjct: 73 -----------------KVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCK 115
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
T T+N +I +G AG ++ L ++ +KP+ T LVRA+ + E+ ++
Sbjct: 116 PTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNM 175
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYG-RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + S + D V +N L AY + + + +LE++ +R P++ T +V Y
Sbjct: 176 VYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR-VTPNERTCSIIVNGYC 234
Query: 320 TNGMKNHAKEF 330
G A F
Sbjct: 235 KEGNMVDASRF 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDT 273
G ++ +F + E KP+ +T +LV A + + S+LR I + + + D+
Sbjct: 27 GKPREAHSIFNSLMDEGHKPTLITYTTLVAALT---RQKLFKSILRLISKVEENGMKPDS 83
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN +++A+ E + M++ GCKP T+ T+++ Y G A + +
Sbjct: 84 ILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEF 143
Query: 334 VE 335
++
Sbjct: 144 LQ 145
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 3/331 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A E+ Q++V+ G + L++ Y ++G + AFS MK + +
Sbjct: 212 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIK 270
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA Q LL +M G+ P T+NTLIDAYGR + +
Sbjct: 271 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 330
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + AF +G+I + + P+ +N ++D+Y +
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 390
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ ++E M+ S +IVTYN++I + + E + + + R+ P V+
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A + G +K + + + I ++ L+ G EM+ + + M
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
Q P + MV AYS G + A++ +
Sbjct: 511 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 541
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 9/301 (2%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N S+ +++ R+G A + + M P+ TY+ +I +K + L
Sbjct: 62 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M G++PN +TYN L+ RA E L +M S+ PD +T +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G M + K+ G+ T +ILL+ K G V++ + T V
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I+ + + G+L+ F M+S IKP +T +L+ A + +L +
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 266 NSDIMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ + FN L+DAYGR KCF VL MQ+ G KP+ V+Y ++V A+ N
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFI----VLSEMQENGLKPNVVSYGSIVNAFCKN 356
Query: 322 G 322
G
Sbjct: 357 G 357
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L MV G N ++ LLS R+G + +LL+ M + PD TYSI
Sbjct: 115 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSI 173
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L K+ L F + +L + G
Sbjct: 174 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 233
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P V YNTLI+ Y + T +M S +PD T N + + +I +
Sbjct: 234 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 293
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Q G+ P++ TFN L+D+YG+ G EK V+ MQ+ +V+Y +++AF
Sbjct: 294 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 353
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ +++ AY G ++ ++ + ++ I
Sbjct: 354 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 413
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
V +N L+ +E + ++ + PD V+Y T++ A G + A + Q
Sbjct: 414 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 473
Query: 334 VEK 336
+ K
Sbjct: 474 MHK 476
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q EK + M + G N S+ ++++A+ ++G +A ++L+ M + D P+
Sbjct: 319 GRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPN 377
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ +I + ++ D+ L+ M + GI P+ VTYN LI +E E +
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + PD + N + A G ID ++ GI+ ++ T++ L+ G AG
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 497
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+M + + M + + + +NI+++A+ + G+ + E L + M +R
Sbjct: 498 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP-DVWTMNCTLRAFGNSG 147
+++ G RP+T +N + A A E L +M + P + ++ N + +G
Sbjct: 18 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + +++ + P+ T+N ++D + K G E + + M + +TYN
Sbjct: 78 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RFIDN 266
+++ RAG + + L M S+++ P T L G + + S+ +++ N
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 197
Query: 267 SDIMLD---TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ D ++ N L G++ E VL+ + G P +V Y T++ Y G
Sbjct: 198 GVTIGDYTCSILLNGLCKD-GKVSIAEE---VLQSLVNAGLVPTRVIYNTLINGYCQTG 252
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 3/331 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A E+ Q++V+ G + L++ Y ++G + AFS MK+ +
Sbjct: 349 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR-HIK 407
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA Q LL +M G+ P T+NTLIDAYGR + +
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + AF +G+I + + P+ +N ++D+Y +
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ ++E M+ S +IVTYN++I + + E + + + R+ P V+
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A + G +K + + + I ++ L+ G EM+ + + M
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
Q P + MV AYS G + A++ +
Sbjct: 648 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 678
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ A +L M D G + ++F L+ AYGR+G +K F +L M+ +P
Sbjct: 420 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN-GLKP 478
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V +Y ++ + K + A+L DM + + PN YN +IDAY + + +
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM S P + T N ++ N QI E+ + + P ++N L+ +
Sbjct: 539 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 598
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ +K + + M KY T+ TY+ +I G AG L +MEYL++ M + PS
Sbjct: 599 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 658
Query: 242 CSLVRAYGHAGK 253
+V AY G
Sbjct: 659 NIMVEAYSKYGN 670
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 134/307 (43%), Gaps = 9/307 (2%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAF 79
D N S+ +++ R+G A + + M P+ TY+ +I +K
Sbjct: 193 DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDL 251
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ L M G++PN +TYN L+ RA E L +M S+ PD +T +
Sbjct: 252 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 311
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+G M + K+ G+ T +ILL+ K G V++ +
Sbjct: 312 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 371
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T V YN +I+ + + G+L+ F M+S IKP +T +L+ A +
Sbjct: 372 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 431
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+L + ++ + FN L+DAYGR KCF VL MQ+ G KP+ V+Y ++V
Sbjct: 432 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI----VLSEMQENGLKPNVVSYGSIV 487
Query: 316 RAYSTNG 322
A+ NG
Sbjct: 488 NAFCKNG 494
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L MV G N ++ LLS R+G + +LL+ M + PD TYSI
Sbjct: 252 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSI 310
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L K+ L F + +L + G
Sbjct: 311 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 370
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P V YNTLI+ Y + T +M S +PD T N + + +I +
Sbjct: 371 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 430
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Q G+ P++ TFN L+D+YG+ G EK V+ MQ+ +V+Y +++AF
Sbjct: 431 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 490
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ +++ AY G ++ ++ + ++ I
Sbjct: 491 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 550
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
V +N L+ +E + ++ + PD V+Y T++ A G + A + Q
Sbjct: 551 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 610
Query: 334 VEK 336
+ K
Sbjct: 611 MHK 613
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q EK + M + G N S+ ++++A+ ++G +A ++L+ M + D P+
Sbjct: 456 GRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPN 514
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ +I + ++ D+ L+ M + GI P+ VTYN LI +E E +
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 574
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + PD + N + A G ID ++ GI+ ++ T++ L+ G AG
Sbjct: 575 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 634
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+M + + M + + + +NI+++A+ + G+ + E L + M +R
Sbjct: 635 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP-DVWTMNCTLRAFGNSG 147
+++ G RP+T +N + A A E L +M + P + ++ N + +G
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + +++ + P+ T+N ++D + K G E + + M + +TYN
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RFIDN 266
+++ RAG + + L M S+++ P T L G + + S+ +++ N
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334
Query: 267 SDIMLD---TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ D ++ N L G++ E VL+ + G P +V Y T++ Y G
Sbjct: 335 GVTIGDYTCSILLNGLCKD-GKVSIAEE---VLQSLVNAGLVPTRVIYNTLINGYCQTG 389
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 13/345 (3%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K E LF M++ GC ANT ++ AL++ + ++A+ LLE M + PD T
Sbjct: 128 KVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA-SKGYVPDNIT 186
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA-YGRAKMFAEMELTLVKM 124
Y+ ++ + + + M ++G P+ V YN L+DA Y K M+L +
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL-FKDV 245
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+++ PD T N L +D E+ ++K ++G P+ T++I+L + +A
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ V+E M K +VTYNI++D + + + LF M P V+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ K + + ++ D V FN L+D + E K +L+ M GC
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
PD V Y T++ NG++ + Q D AMK F
Sbjct: 426 APDYVAYNTLM-----NGLRKQGRHIQ-----ADRLTQAMKEKGF 460
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 3/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A+ L++ MV G + + ++ +LL+A+ + +A L + M +PDV TYS
Sbjct: 60 DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK-GFEPDVVTYST 118
Query: 69 LIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I C + ++ L M +G NTV YN LI+ + + L +M S+
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L G++ ++ ++ S G P + +N LLD+ K G ++
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + + Y VTYN ++ R ++ + E +F+ M + P+ T ++
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ A K + VL + + D V +N L+D + + + M GC PD
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 308 KVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
V+Y ++ TN + + F ++E+
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 4/329 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ + ++LF+ M+D G + + L+ Y + G D+A L E M + +P
Sbjct: 19 CKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV-GLEPS 77
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
+ TY+ L+ + K + L M+ +G P+ VTY+T+I + K+ +E+
Sbjct: 78 IYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLF 137
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM+ C + N + I+ K E+ S G P T+N +L +
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M YS +V YN ++DA + G + LF+ + ++ P VT
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ ++ + + + S + ++ ++ + R K + VLE M +
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD VTY ++ + + A E
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHEL 346
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C P+ +T L++F G++ K +E+ GI P +NIL+D Y K G ++
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + E M +I TYN +++AF + +K+ LF+ M + +P VT +++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 248 YGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GK E L + + +TV +N L++ + + +LE M +G P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQD 332
D +TY T++ G + AK+F D
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFD 208
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ ++A +LF+ ++ +G +T ++ ++L R D+A + + M + C P+ TY
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS-GCAPNGATY 292
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
SI++ +A D +L +MS G P+ VTYN L+D + + + M+
Sbjct: 293 SIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 352
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PD+ + + L + ++ +++ + P + TFNIL+D KAG ++
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+++ M + V YN +++ + G Q + L + M+ + C
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 123/327 (37%), Gaps = 42/327 (12%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+C P+ T+ +++KS K L M GI P+ + YN LID Y + E
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M+S EP ++T N L AF ++ + ++ G +P + T++ ++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 178 YGKAG------------------------------------HFEKMSAVMEYMQKYHYSW 201
K G + E+ ++E M Y
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+TYN ++ R G + + + F M S P V L+ A GK ++ +
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + M DTV +N ++ R E + + + M GC P+ TY ++ +
Sbjct: 243 KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC-- 300
Query: 322 GMKNHAKEFQDLVEKMDETCLAMKRPD 348
AK+ D + ++E PD
Sbjct: 301 ----RAKKVDDAHKVLEEMSKIGAVPD 323
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 152/303 (50%), Gaps = 3/303 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G+ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHA 308
Query: 328 KEF 330
K
Sbjct: 309 KRL 311
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S+T LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + + + ++ V Y +I A+ +AG + + L ++S P +
Sbjct: 267 AGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKS----PDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 323 RDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ ++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I+ + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKL 280
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQ-N 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+A +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 279 KLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 335 RIEEATYV---------------FRQAIDA-GEVRDITVFERMIHLFSKYKKYANVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + GV MQ+
Sbjct: 379 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 162/328 (49%), Gaps = 13/328 (3%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFD 80
G + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K +
Sbjct: 4 GLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYS 61
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ + + L
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLL 121
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 122 TMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY
Sbjct: 242 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYER 301
Query: 321 NGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G+ HAK +KRPD
Sbjct: 302 AGLVAHAKRL----------LHELKRPD 319
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREJK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 323 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSDVIAIVLNAY 400
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+G+ P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RGLSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 335 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 378
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 379 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 419
Query: 303 GC 304
GC
Sbjct: 420 GC 421
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 1/321 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M GC + ++ L++ + G D+A L M + QP+V T++I+
Sbjct: 34 QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGS-QPNVITHNII 92
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LL++M +G P+ VT+N LI+ R + L KM + C
Sbjct: 93 LRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGC 152
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + E S G P I T+N +L + K G +
Sbjct: 153 TPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVE 212
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G Q L MR + +KP +T SL+
Sbjct: 213 LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLS 272
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK E+ ++ + + +N ++ + + L M +GCKP +V
Sbjct: 273 REGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEV 332
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
+Y ++ + G+ A E
Sbjct: 333 SYTILIEGIANEGLAKEALEL 353
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+C PDV TY+ILI++ + LL +M ++G +P+ VTYN L++ + E
Sbjct: 11 ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M S +P+V T N LR+ ++G+ EK + G PS+ TFNIL++
Sbjct: 71 IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G + ++E M + + ++YN ++ F + + + +M S P
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +++ A GK + +L + + + +N ++D ++ + +L
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
M+ +G KPD +TY +++ S G A +F VE
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%)
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + L ++C PDV T + A + K ++ S G +P + T+N+L++
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ + M Y ++T+NI++ + G E L M + PS V
Sbjct: 63 KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ G + +L + +++ +N L+ + + K LE+M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
RGC PD VTY TM+ A +G + A E
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVEL 213
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + +
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRLLH----------ELKRPD 319
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ G K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALVLNAY 400
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKL 280
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G++ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 41/364 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AH+L M +GCD + S+T L+S+ + G +A L P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF------TP 244
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y+ LI K + F++ LL +M +GI PN ++Y T+I+A A L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304
Query: 122 VKMLSEDCEPDVWTMNCTLRAF----GNSGQIDTMEK----------------------- 154
KM + C P++ T ++ F G+ +D ++
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364
Query: 155 --------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ + + G P++ T++ L+D Y KAG + S V +M + +V Y
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++D R Q L M+ E P+ VT + ++ +G+ + V + N
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S +T +N L+D+ + + F E G+++ M+ RG + + VTY T++ Y GM
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 327 AKEF 330
A E
Sbjct: 545 ALEL 548
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 138/324 (42%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A + + M+ EG N ++ AL+ A S+ M+ C P+V TYS
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-INGCCPNVRTYSA 391
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA D + + M T G PN V Y ++D R MF + + M E+
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ T N ++ SG++D K +++ ++G P+ T+N LLDS K F +
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M+ +VTYN +I + AG L + L M KP +T+ ++ AY
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK ++ + D + + L+ E L M G P+
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
T+ +VR +N + A +F D
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLD 655
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 8/320 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L Q M EG + F +++ +Y R+G ++A M++ +P V Y+ ++ +
Sbjct: 98 LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHILDAL 156
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L F + + S+M G+ PN TYN L+ A + LV+M S+ C+PD
Sbjct: 157 LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + G++ + F PS+ +N L++ K FE+ +++
Sbjct: 217 VSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDE 271
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG-HAG 252
M +++Y +I+A AG+++ + M + P+ T SL++ + G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
E L R I ++ + V +N L+ + + V M+ GC P+ TY
Sbjct: 332 SHEALDFWDRMI-REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYS 390
Query: 313 TMVRAYSTNGMKNHAKEFQD 332
++ Y+ G + A E +
Sbjct: 391 ALIDGYAKAGDLDGASEVWN 410
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 5/268 (1%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++I+ D VQ LL M +GI + + ++I +Y RA + T +M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P V N L A + + + Y + G++P++ T+NILL + K
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++ M V+Y +I + + G +K+ L + PS +L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNAL 252
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ E+ +L + N I + + + +++A VL M RGC
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
P+ T+ ++++ + G + A +F D
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 176 DSYGKAGHFEKMSAVMEYMQKY----HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
D + H ++ +EY + + T +TY ++I+ ++ ++YL + M+
Sbjct: 45 DVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
E I S S++ +Y AG E+ + + + +N ++DA F
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ + M++ G +P+ TY +++A N + A + LVE + C
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL--LVEMSSKGC 212
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 3/331 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A E+ Q++V+ G + L++ Y ++G + AFS MK+ +
Sbjct: 345 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR-HIK 403
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA Q LL +M G+ P T+NTLIDAYGR + +
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + AF +G+I + + P+ +N ++D+Y +
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ ++E M+ S +IVTYN++I + + E + + + R+ P V+
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A + G +K + + + I ++ L+ G EM+ + + M
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
Q P + MV AYS G + A++ +
Sbjct: 644 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 674
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ A +L M D G + ++F L+ AYGR+G +K F +L M+ +P
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN-GLKP 474
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V +Y ++ + K + A+L DM + + PN YN +IDAY + + +
Sbjct: 475 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM S P + T N ++ N QI E+ + + P ++N L+ +
Sbjct: 535 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 594
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ +K + + M KY T+ TY+ +I G AG L +MEYL++ M + PS
Sbjct: 595 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIH 654
Query: 242 CSLVRAYGHAGK 253
+V AY G
Sbjct: 655 NIMVEAYSKYGN 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F M + N ++ ++ + + G + FSL + M +P+ TY++L+
Sbjct: 215 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV-CHGLKPNAITYNVLL 273
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+A + ALL +M++Q + P+ TY+ L D R M K L
Sbjct: 274 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVT 333
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+T + L G++ E+ + +AG+ P+ +N L++ Y + G E +
Sbjct: 334 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 393
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ H +TYN +I+ +A + + L M+ + P+ T +L+ AYG
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 453
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ EK VL + + + + V + +V+A+ + E +L+ M + P+
Sbjct: 454 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 513
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKM 337
Y ++ AY +G + A LVEKM
Sbjct: 514 YNAIIDAYVEHGPNDQAFI---LVEKM 537
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 134/307 (43%), Gaps = 9/307 (2%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAF 79
D N S+ +++ R+G A + + M P+ TY+ +I +K
Sbjct: 189 DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDL 247
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ +L M G++PN +TYN L+ RA E L +M S+ PD +T +
Sbjct: 248 EAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 307
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+G M + K G+ T +ILL+ K G V++ +
Sbjct: 308 FDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 367
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T V YN +I+ + + G+L+ F M+S IKP +T +L+ A +
Sbjct: 368 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 427
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+L + ++ + FN L+DAYGR KCF VL MQ+ G KP+ V+Y ++V
Sbjct: 428 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI----VLSEMQENGLKPNVVSYGSIV 483
Query: 316 RAYSTNG 322
A+ NG
Sbjct: 484 NAFCKNG 490
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 36/363 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L MV G N ++ LLS R+G + +LL+ M + PD TYSI
Sbjct: 248 EAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSI 306
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L K+ L F + +L + G
Sbjct: 307 LFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 366
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P V YNTLI+ Y + T +M S +PD T N + + +I +
Sbjct: 367 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 426
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Q G+ P++ TFN L+D+YG+ G EK V+ MQ+ +V+Y +++AF
Sbjct: 427 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 486
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ +++ AY G ++ ++ + ++ I
Sbjct: 487 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 546
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
V +N L+ +E + ++ + PD V+Y T++ A G + A + Q
Sbjct: 547 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 606
Query: 334 VEK 336
+ K
Sbjct: 607 MHK 609
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q EK + M + G N S+ ++++A+ ++G +A ++L+ M + D P+
Sbjct: 452 GRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPN 510
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ +I + ++ D+ L+ M + GI P+ VTYN LI +E E +
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 570
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + PD + N + A G ID ++ GI+ ++ T++ L+ G AG
Sbjct: 571 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 630
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+M + + M + + + +NI+++A+ + G+ + E L + M +R
Sbjct: 631 RLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP-DVWTMNCTLRAFGNSG 147
+++ G RP+T +N + A A E L +M + P + ++ N + +G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + +++ + P+ T+N ++D + K G E ++ + M + +TYN
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RFIDN 266
+++ RAG + + L M S+++ P T L G + + S+ + + N
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330
Query: 267 SDIMLD---TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ D ++ N L G++ E VL+ + G P +V Y T++ Y G
Sbjct: 331 GVTIGDYTCSILLNGLCKD-GKVSIAEE---VLQSLVNAGLVPTRVIYNTLINGYCQTG 385
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 41/372 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + EKA E+ Q M+++G + ++Q+++ L+ + R +AF LL+ MK
Sbjct: 364 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR-KLA 422
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG----------- 109
P V TYS++I + A+L +M G++PN V Y TL+ A+
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482
Query: 110 ------------------------RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+AK E L++ML P+ T + +
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+++ ++ + + S G+ P++ + L++ + K G+ + +V ++ + T
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+++I R G + + +F ++ + + P+ T SL+ G +K +L +
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I D V +N L+D + K + + ++ RG P+ VTY MV Y + KN
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS--KN 720
Query: 326 HAKEFQDLVEKM 337
FQ L+E+M
Sbjct: 721 PTAAFQ-LLEEM 731
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + A + M ++GC N ++ ++ R+ L D+A L M + PD+
Sbjct: 227 KVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK-GLVPDL 285
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY ILI + + +L +M G++P +TYN LID + R + +
Sbjct: 286 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 345
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M++ E ++ N L +G+++ + ++ G++P T+++L++ + + +
Sbjct: 346 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 405
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ +++ M+K + T++TY+++I+ R G+L+ + R M +KP+ V +
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 465
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ A+ G+ E+ +L + I+ D +N L+ + + K E + L M +R
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 304 CKPDKVTYRTMVRAYSTNG 322
+P+ TY + YS G
Sbjct: 526 LRPNAHTYGAFIDGYSKAG 544
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 7/341 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + MV G +AN + LL+ ++G +KA +++ M +PD TYS+
Sbjct: 337 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK-GVEPDSQTYSL 395
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ + + LL +M + + P +TY+ +I+ R L +M+
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ + A G+++ E+ + GI P + +N L+ + KA E+
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + TY ID + +AG+++ + F M S + P+ +L+ +
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + SV RFI + ++ D ++ L+ R E G+ +Q++G P+
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
TY +++ G + A + ++E C+ PD
Sbjct: 636 FTYNSLISGSCKQGNVDKASQL------LEEMCIKGINPDI 670
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 14/337 (4%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ +A +F+ ++ + Q+++ L+ R+G +AF + ++
Sbjct: 574 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK-GLL 632
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ LI K DK LL +M +GI P+ VTYN LID +A E+
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG-----EIE 687
Query: 121 LVKMLSEDCEPDVWTMNCTLRA-----FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
K L +D E T NC A + S + E+ G+ P +N++L
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ K FEK + + M + ++ T V++N +I+ + ++G L++ +L M ++
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT SL+ AG + + + ++M + L+ Y + +E+ +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
E M +G +PDK+TY M+ AY G A + +D
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 76/401 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C + + + + MV G N +T L++A+ + G +++ +LE M+ P
Sbjct: 435 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ-GILP 493
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT- 120
DV Y+ LI KA ++ + L +M + +RPN TY ID Y +A EME+
Sbjct: 494 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA---GEMEIAD 550
Query: 121 --------------------LVK-----------------MLSEDCEPDVWTMNCTLRAF 143
L++ +LS DV T + +
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+G++ + + Q G+ P+ T+N L+ K G+ +K S ++E M + I
Sbjct: 611 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 670
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR- 262
VTYNI+ID +AG++++ + LF + + P+CVT ++V Y + P +L
Sbjct: 671 VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730
Query: 263 ----------FIDNSDI------------------MLD-----TVFFNCLVDAYGRLKCF 289
FI N + ML+ TV FN L++ Y +
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKL 790
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
E +LE M ++ P+ VTY +++ GM AK
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 831
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 126/318 (39%), Gaps = 41/318 (12%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK + E+A LF + G N ++ A++ Y +S AF LLE M + P
Sbjct: 679 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP- 737
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR----------------------- 95
PD Y++++ C K F+K L +M +G
Sbjct: 738 --PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795
Query: 96 -----------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
PN VTY +LID +A M E + ++M + P T L +
Sbjct: 796 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
N G + + +E+ + GI+P T+ +++D+Y + G+ + + + + ++
Sbjct: 856 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVA 915
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+ +I A + + ++ L + + T + R + AG ++ VLR +
Sbjct: 916 AYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
Query: 265 DNSDIMLDTVFFNCLVDA 282
+ +T LVD
Sbjct: 976 VKFGWVSNTTSLGDLVDG 993
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 130/292 (44%), Gaps = 1/292 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N+ F L+ +Y + G +A ++ KN + +P + + + L+ LK + +
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF-EFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M + P+ TY +I A+ + + + L++M + C P++ T N +
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ +D + G+ P + T++IL++ + + ++ M +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +ID F R GD++Q + M + I+ + + +L+ AGK EK +++ +
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ D+ ++ L++ + R + A +L+ M++R P +TY ++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 434
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN+V ++ L+D+Y + E + + + P + + N L +++ K
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
++ + + P + T+ ++ ++ K G+ + V+ M + S +VTYN++I R
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A L + L R M + + P T L+ + + + +L + + + + +
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 276 FNCLVDAYGR--------------LKCFAE------------------MKGVLEVMQ--- 300
+N L+D + R + C E M+ LE+MQ
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
++G +PD TY ++ + +N A+ F+ L+++M + LA
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRG--QNMARAFE-LLDEMKKRKLA 422
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ ++ KCY +S P+ F++L+DSY K G + V + + + ++++ N
Sbjct: 129 LGSIVKCY---RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNS 185
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++ + ++ +F M + ++ P T +++ A+ G + VL +
Sbjct: 186 LLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG 245
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ V +N ++ R + E + M +G PD TY ++ + AK
Sbjct: 246 CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK 305
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 166/351 (47%), Gaps = 7/351 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++ ++ + M + G ++T L+ A+G++G + + E M+ +P+
Sbjct: 109 GRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQ-GLRPN 167
Query: 63 VNTYSILIKSCLK---AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
V Y+ +I + K A ++ A + S G+ PN TYN ++ +YG+ +M +ME
Sbjct: 168 VVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEA 227
Query: 120 TLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ +M ++ D +T + + A+ +G++D + ++ + G QPS++ + +L
Sbjct: 228 LVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHML 287
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G AG ++M ++ M++ + YN +I+AFG+A ++ M F+ MR + +
Sbjct: 288 GTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADV 347
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +L+ + GK + + + L+DAY R F ++ ++
Sbjct: 348 KTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISR 407
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
M++ G PD V + ++ Y G A++ L M E +A++ +F
Sbjct: 408 MKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKV--LCGAMKEYGIALETNNF 456
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 2/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG E+ Q +G + N ++ A++ +YG+ + DK +L+E M+ P
Sbjct: 181 LGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGL 240
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T+S ++ + +A DK ++ G +P+ + ++ G A EM TL
Sbjct: 241 DNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTL 300
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM +P N + AFG + I +M ++ + G+ + T+N L+D++ K
Sbjct: 301 DKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKT 360
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + M++ T+ T ++DA+ RA +++ L M+ E P V
Sbjct: 361 GKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVF 420
Query: 242 CSLVRAYGHAGKPEKLGSVL-RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ YG GKPE+ VL + I L+T F +++A+ R + + L M
Sbjct: 421 NLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMN 480
Query: 301 QR-GCKPDKVTYRTMV 315
KPD T T++
Sbjct: 481 TDYATKPDIKTLTTLL 496
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 131/275 (47%), Gaps = 4/275 (1%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ +L++ +A ++ + DM G+RP TY LIDA+G+A M M
Sbjct: 101 FDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMR 160
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA---GIQPSINTFNILLDSYGKAG 182
+ P+V + G G + ME+ + + Q + G++P+ T+N ++ SYG+
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQ 220
Query: 183 HFEKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+KM A++E M+ T++ V+ A+ RAG + + F + + +PS
Sbjct: 221 MMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAW 280
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G AG+ +++ L + + T +N +++A+G+ + M + M++
Sbjct: 281 TAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRR 340
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G D TY T++ ++ G A++F L+++
Sbjct: 341 DGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKR 375
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 5/294 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F LL YGR+G + + M+ +P ++TY+ILI + KA ++ DM
Sbjct: 101 FDVLLQGYGRAGDRQRLAQVQRDMREV-GVRPGMSTYTILIDAWGKAGDLRRMWQAWEDM 159
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML---SEDCEPDVWTMNCTLRAFGNS 146
QG+RPN V Y ++I G+ A ME T +M + EP+ T N + ++G
Sbjct: 160 REQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQ 219
Query: 147 GQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+D ME E+ ++ G+ T + ++ ++ +AG +K + + ++
Sbjct: 220 QMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHA 279
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ ++ G AG +M M+ +KPS +++ A+G A + + +
Sbjct: 280 WTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMR 339
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ D +N L+D + + E + +M++ G +P T +++ AY+
Sbjct: 340 RDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYT 393
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 3 GKCKQPEKAHELF-QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ +PE+A ++ AM + G T +FT+++ A+ R+G DKA L M +P
Sbjct: 428 GRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYATKP 487
Query: 62 DVNTYSILIKSCLKA 76
D+ T + L+ C+ A
Sbjct: 488 DIKTLTTLLSFCIPA 502
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 7/334 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P+KA +LF M + GC + SF +L +S +KA+ L ++ D TY
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTY 198
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ K +L +M +GI PN TYNT++ + RA ++M
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
DCE DV T + FG +G+I +++ G+ PS+ T+N ++ K + E
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ E M + Y + TYN++I AG+ + E L + M +E +P+ T ++R
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM----KGVLEVMQQR 302
Y + EK + + + D + + +N L+ K +M K +LE M +R
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLE-MVER 437
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G P K T+ ++ G + AKE L K
Sbjct: 438 GFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSK 471
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ KA E+ + MV+ G + N ++ +L + R+G A+ MK DC+ DV T
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVT 267
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ A + + + +M +G+ P+ TYN +I + + +M+
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EP+V T N +R ++G+ E+ ++ ++ G +P+ T+N+++ Y + E
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + E M + TYNI+I
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 2/294 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ SF + R L +SL+ M++ P T++I+ + A DK L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSL-RIGPSPKTFAIVAERYASAGKPDKAVKL 148
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M G + ++NT++D ++K E L + L D T N L +
Sbjct: 149 FLNMHEHGCFQDLASFNTILDVLCKSKR-VEKAYELFRALRGRFSVDTVTYNVILNGWCL 207
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + ++ GI P++ T+N +L + +AG M+K +VT
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y V+ FG AG++K+ +F M E + PS T ++++ E + +
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ +N L+ F+ + +++ M+ GC+P+ TY M+R YS
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
T+ + +S I PS TF I+ + Y AG +K + M ++ + ++N ++
Sbjct: 109 TVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL 168
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
D ++ +++ LFR +R RF
Sbjct: 169 DVLCKSKRVEKAYELFRALRG------------------------------RF------S 192
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+DTV +N +++ + +K + VL+ M +RG P+ TY TM++ + G HA EF
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 331 QDLVEKMD 338
++K D
Sbjct: 253 FLEMKKRD 260
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKN--------------------------------- 55
+++ L++ +G+ GLFD A + L+ M+
Sbjct: 11 TYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 56 -TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PD+ Y+ +I KA F + ++L+S+M T G+ PNTV+Y+TL+ Y K F
Sbjct: 71 KRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKF 130
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
E +M C D+ T N + +G G +K + + GI+P++ ++N L
Sbjct: 131 LEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 190
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L YG A F + + MQ+ + +VTYN ++ +G+ + ++ L + M+S I
Sbjct: 191 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 250
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ +T +++ + GK ++ + + + +S + +D V + ++ AY R A K
Sbjct: 251 EPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 310
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+L ++ +PD + T + + +G
Sbjct: 311 LLHELK----RPDNIPRDTAIHILAGSG 334
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A ++ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ + K
Sbjct: 207 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 IGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + +G+ E+ V R ++ + D F ++ + + K ++ + V + M+
Sbjct: 323 RDTAIHILAGSGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G PD ++ AY + K +E DE CL
Sbjct: 383 GLGYFPDSNVTALVLNAYGK--LHEFDKANNVYIEMQDEGCL 422
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 36/278 (12%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMF-------AEMEL-----------TLVKMLSEDCE--- 130
+ + P+ TY+TLI +G+ +F +ME L+++ + C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 131 --------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 63 AISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLT 122
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y + F + V M++ + T NI+ID +G+ G K+ + LF MR I+P
Sbjct: 123 MYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ MQ RG +P+ +TY T++ +S G + A FQ L
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKL 280
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 150/331 (45%), Gaps = 3/331 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++FQ M + GC T ++ L+ +G G ++ LLE M + +P+ TY+I
Sbjct: 147 DEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNI 206
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI++ ++ +L M GI+P+ VTYNT+ AY + + E ++KM
Sbjct: 207 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNK 266
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G + + + + G+ P+ FN L+ Y A +
Sbjct: 267 VKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVD 326
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M+++ +VT++ +++A+ AG + E +F M I+P L + Y
Sbjct: 327 EALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGY 386
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+P K S+L + + + V F ++ + + E M + G P+
Sbjct: 387 VRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNL 446
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY T++ Y G + ++++ M+E
Sbjct: 447 KTYETLIWGY---GEAKQPWKAEEILSTMEE 474
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 5/327 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS- 72
L + D G ++ A+++A+ SG D+A + + MK C+P +TY+ LIK
Sbjct: 117 LLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEY-GCKPTTSTYNTLIKGF 175
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ ++ ++ L + ++PN TYN LI A+ K E L KM++ +PD
Sbjct: 176 GIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 235
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T N RA+ +G+ + E+ K Q ++P+ T I++ Y K G+ + +
Sbjct: 236 VVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLY 295
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M++ V +N +I + A D ++ LM IKP VT +++ A+ AG
Sbjct: 296 RMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 355
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + + + I D ++ L Y R + + +L M + G + + V +
Sbjct: 356 LMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFT 415
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T++ + G + A F L EKM E
Sbjct: 416 TIISGWCAAGKMDRA--F-SLCEKMHE 439
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
CQ V+ + L+ + + + QA+ +++ +G +P +TY TL+ A R K F +
Sbjct: 57 CQ-TVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIP 115
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L K+ +PD +N + AF +SG++D K ++K + G +P+ +T+N L+ +
Sbjct: 116 ALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF 175
Query: 179 GKAGH-FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G G +E M + Q + TYNI+I A+ L++ + M + I+P
Sbjct: 176 GIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 235
Query: 238 CVTLCSLVRAYGHAGKPEK--------------------------------LGSVLRFI- 264
VT ++ RAY G+ EK + LRF+
Sbjct: 236 VVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLY 295
Query: 265 --DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + V FN L+ Y + L +M++ G KPD VT+ T++ A+S+ G
Sbjct: 296 RMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 355
Query: 323 MKNHAKE-FQDLVE 335
+ ++ +E F D+V+
Sbjct: 356 LMDNCEEIFNDMVK 369
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ E+A + MV G + ++ + AY ++G +KA L+ M+ +P+ T
Sbjct: 215 KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYN-KVKPNERT 273
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
I+I K + L M G+ PN V +N+LI Y A ++ L M
Sbjct: 274 CGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLME 333
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PDV T + + A+ ++G +D E+ + AGI+P I+ ++IL Y +AG
Sbjct: 334 EFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPR 393
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K +++ M KY +V + +I + AG + + L M P+ T +L+
Sbjct: 394 KAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLI 453
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
YG A +P K +L ++ ++ + + DA+ + F E +L
Sbjct: 454 WGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++A G + + +F + E KP+ +T +LV A + + + ++L + ++
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D++ N +++A+ E + + M++ GCKP TY T+++ + G+
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF---GIVGRPY 182
Query: 329 EFQDLVEKMDE 339
E L+E M +
Sbjct: 183 ESMKLLEMMGQ 193
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 237 SCVTL---CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
SC T+ L+ A GKP + +V + + + LV A R K F +
Sbjct: 56 SCQTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIP 115
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+L + G KPD + M+ A+S +G + A K FQ + E
Sbjct: 116 ALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKE 158
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 157/330 (47%), Gaps = 3/330 (0%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
++ C++ + +A +F M+ G + SF++++ + R+G +A + E MK
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV-G 394
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD Y+ILI + + ++M +G + VTYNTL++ R KM + +
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M+ PD +T+ + + G + +E ++P + T+N L+D +
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G EK + M + ++++I+I+ F G + + L+ M+ + IKP+
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT ++++ Y AG K L + + + D + +N L++++ + + F ++
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
M++RG P+ VTY ++ +S +G A+
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 142/315 (45%), Gaps = 1/315 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M ++G A+ ++ L++AY R GL +AF L++ M +P + TY+ LI K
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGK-GLKPGLFTYNALINGLCKEG 308
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
++++ + +L +M G+ PN T+N ++ R + E E +ML PD+ + +
Sbjct: 309 SYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFS 368
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ F +G++ +EK + G+ P + IL++ Y + + M +
Sbjct: 369 SIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER 428
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+VTYN +++ R L + LF+ M + P TL +L+ Y G K
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA 488
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S+ + + D V +N L+D + ++ + K + M R P +++ ++
Sbjct: 489 LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILING 548
Query: 318 YSTNGMKNHAKEFQD 332
+ + G+ + A D
Sbjct: 549 FCSLGLVSEAFRLWD 563
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + A ++ MV+ GC + ++ LL+ R + D A L + M
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER-GVF 466
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T + LI K K +L M+ + ++P+ VTYNTL+D + + + +
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+S + P + + + F + G + + +++ + GI+P++ T N ++ Y +
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ K + + M +TYN +I++F + + + +L M + P+ VT
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ + G+ ++ VL + + I D + L++ Y E V + M
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706
Query: 301 QRGCKPD 307
QRG PD
Sbjct: 707 QRGFVPD 713
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 149/337 (44%), Gaps = 43/337 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ + E FQ + G + + ALL A + G D A+ + E + + +V
Sbjct: 166 QARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIV-NV 224
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T +I++ + K D V LS+M +G+ + VTYNTL++AY R + +E
Sbjct: 225 YTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE------- 277
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
AFG +D M G++P + T+N L++ K G
Sbjct: 278 ------------------AFG---LVDCM-------AGKGLKPGLFTYNALINGLCKEGS 309
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+E+ V++ M T+N ++ R D+ + E +F M + P ++ S
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV---MQ 300
+V + G+ + + + ++ DTV + L++ Y R ++ G L++ M
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND---DVSGALKMRNEMV 426
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+RGC D VTY T++ M + A E F+++VE+
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%)
Query: 98 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
V ++ LI Y +A+ E + + N L A G +D K YE
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
F +G ++ T NI++++ K G + + + M++ +VTYN +++A+ R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ + L M + +KP T +L+ G E+ VL + + + FN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ R + E + V M QRG PD +++ ++V +S NG
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNG 378
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKRL-GFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 31 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 89
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 90 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 150 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 209
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 210 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 265
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 266 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 325
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 326 GLGYFPDSDVIAIVLNAY 343
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N + FG + + ++AG+ P+ +++ LL Y + F + +V
Sbjct: 20 PDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSV 79
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M++ + T NI+ID +G+ G K+ + LF MR I+P+ V+ +L+R YG
Sbjct: 80 FSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGD 139
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + + R + +I + V +N ++ YG+ + +++ MQ RG +P+ +T
Sbjct: 140 AELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 199
Query: 311 YRTMVRAYSTNG-MKNHAKEFQDL 333
Y T++ + G + A FQ L
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKL 223
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 173 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GVEID 231
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 232 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 287
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + D+ + + + + ++K + G P + I+L++YGK
Sbjct: 288 QAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 7/337 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q ++A E F+ M++EG T +F ++ YG +G F + SL++ MK C PD
Sbjct: 308 GKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKF--HCAPD 365
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K ++ +M G++P+ V+Y TL+ A+ M E E +
Sbjct: 366 TRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIA 425
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M D E D +T + R + + ++ +++F AG S ++ +D+YG+ G
Sbjct: 426 EMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSS-EGYSANIDAYGERG 484
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + V Q+ + T++ YN++I A+G + ++ LF M S + P T
Sbjct: 485 YLSEAERVFICCQEVNKR-TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 543
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV+ A P+K L + + + D + + ++ ++ +L + V + M +
Sbjct: 544 TLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 603
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+PD V Y ++ A++ G A + VE M E
Sbjct: 604 NIEPDVVVYGVLINAFADTGNVQQAMSY---VEAMKE 637
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 158/407 (38%), Gaps = 113/407 (27%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+++A + E K+ + +V Y+I+++ KA + VQ+L +M +GI+P TY
Sbjct: 166 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 225
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPD------------------------------ 132
TLID Y + + L KM +PD
Sbjct: 226 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCD 285
Query: 133 -----------VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+T N + +G SGQI + +++ GI P+ TFN ++ YG
Sbjct: 286 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNN 345
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F +++++M+ M K+H + TYNI+I + D+++ F+ M+ +KP V+
Sbjct: 346 GQFGEVTSLMKTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSY 404
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL---------------------- 279
+L+ A+ ++ ++ +D++D+ +D + L
Sbjct: 405 RTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHV 464
Query: 280 ------------VDAYGRLKCFAEMKGVL------------------------------- 296
+DAYG +E + V
Sbjct: 465 AGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKAC 524
Query: 297 ---EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
E M G PDK TY T+V+ ++ M + AK + +EKM ET
Sbjct: 525 ELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCY---LEKMRET 568
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PDC 59
G K EKA ELF++M+ G + ++ L+ + + DKA LE M+ T DC
Sbjct: 515 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDC 574
Query: 60 -------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+PDV Y +LI + + + +
Sbjct: 575 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 634
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML---SEDCEPDVWTMNCTLRAFGN 145
M GI N+V YN+LI Y + E E K+L +E PDV+T NC + +
Sbjct: 635 MKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQ 694
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ E +E + + + TF ++L Y K G FE+ + + + M++ ++
Sbjct: 695 RSMVRKAEAIFESMKQRR-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLS 753
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
YN V+ + G K+ F+ M S I+P T SL
Sbjct: 754 YNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 792
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 7/302 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ ++ AYG S +KA L E M + PD TY+ L++ A DK + L M
Sbjct: 507 YNVMIKAYGISKSCEKACELFESMMSY-GVTPDKCTYNTLVQILASADMPDKAKCYLEKM 565
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G + + Y +I ++ + E +M+ + EPDV + AF ++G +
Sbjct: 566 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 625
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM----QKYHYSWTIVT 205
E + AGI + +N L+ Y K G+ ++ A+ + + Y + T
Sbjct: 626 QQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYP-DVYT 684
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
N +I+ + + +++ E +F M+ R + + T ++ Y G+ E+ + + +
Sbjct: 685 SNCMINLYSQRSMVRKAEAIFESMKQRR-EANEFTFAMMLCMYKKNGRFEEATQIAKQMR 743
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I+ D + +N ++ Y F E + M G +PD T++++ GM
Sbjct: 744 EMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSK 803
Query: 326 HA 327
A
Sbjct: 804 KA 805
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 152/350 (43%), Gaps = 27/350 (7%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--- 65
EK+ F+ G + +++ ++A + AYG G +A + C +VN
Sbjct: 453 EKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVF-------ICCQEVNKRTV 504
Query: 66 --YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+++IK+ + + +K L M + G+ P+ TYNTL+ A M + + L K
Sbjct: 505 LEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEK 564
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M D + +F GQ++ E+ Y++ I+P + + +L++++ G+
Sbjct: 565 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 624
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRS--ERIKPSCVT 240
++ + +E M++ V YN +I + + G L + E ++R L+RS E P T
Sbjct: 625 VQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYT 684
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF--FNCLVDAYGRLKCFAEMKGVLEV 298
++ Y K ++ + + F C+ GR F E + +
Sbjct: 685 SNCMINLYSQRSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGR---FEEATQIAKQ 741
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
M++ D ++Y +++ Y+ +G F++ VE E + +PD
Sbjct: 742 MREMRILTDPLSYNSVLGLYALDG------RFKEAVETFKEMVSSGIQPD 785
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ-PDVNTY 66
++A +AM + G N+ + +L+ Y + G D+A ++ + ++ + Q PDV T
Sbjct: 626 QQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTS 685
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + K +A+ M Q N T+ ++ Y + F E +M
Sbjct: 686 NCMINLYSQRSMVRKAEAIFESMK-QRREANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 744
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + N L + G+ + +++ S+GIQP +TF L K G +K
Sbjct: 745 MRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKK 804
Query: 187 MSAVMEYMQK 196
+E ++K
Sbjct: 805 AVRKIEEIRK 814
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 7/317 (2%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
CD T +TA++S D+A L + M+ + + +V+TY+ L+ C+K
Sbjct: 208 CDVYT--YTAMISMCIYQQDVDRAMDLAKEMR-VRNIERNVHTYTALMNVCIKCGNCPLA 264
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ M G PN VTYNTLID YG+ ++ + L M +E EP + T N + A
Sbjct: 265 LDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIA 324
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
GQ Y++ G P+ T+N L+ +YGKAG +K+ V + M +
Sbjct: 325 CNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERS 384
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TY+ +I A +AG + LF M E P+ VT SL+ A + EK V
Sbjct: 385 VITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFE 444
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ D V F L+ +Y + + G E M+ + CKPD + + ++ G
Sbjct: 445 QMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETG 504
Query: 323 M----KNHAKEFQDLVE 335
+ + FQ VE
Sbjct: 505 VIWAQRKALALFQQAVE 521
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC A + + M +G N ++ L+ YG+ GL+++ +L MK T +P +
Sbjct: 257 KCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMK-TEGVEPVL 315
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI +C + A+ M +G PN TYN LI AYG+A ++ +
Sbjct: 316 RTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQE 375
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + CE V T + + A +GQ + + + + G P+ T+N L+ + +
Sbjct: 376 MVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQ 435
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+EK S V E MQK + +VT+ +I ++ + G ++ + MR +R KP + +
Sbjct: 436 WEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNA 495
Query: 244 LV 245
++
Sbjct: 496 II 497
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 5/307 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-----DVNTYSILIKSCLKAFAFD 80
++++ LL ++GL +A + E ++N P DV TY+ +I C+ D
Sbjct: 168 DSRATALLLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVD 227
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ L +M + I N TY L++ + T M + P+V T N +
Sbjct: 228 RAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLI 287
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+G G + K ++ G++P + T+N L+ + G + AV + M YS
Sbjct: 288 DVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYS 347
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
TYN +I A+G+AG L ++ +F+ M + + S +T SL+ A AG+ E +
Sbjct: 348 PNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALEL 407
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + +TV +N L+ A + + + V E MQ+ GC PD VT+ ++ +Y
Sbjct: 408 FNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEK 467
Query: 321 NGMKNHA 327
G A
Sbjct: 468 GGQWRRA 474
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 1/293 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L + M + N ++TAL++ + G A HM+ C P+V TY+
Sbjct: 227 DRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGAC-PNVVTYNT 285
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K +++ +L+ M T+G+ P TYNTLI A E +ML E
Sbjct: 286 LIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEG 345
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T N + A+G +GQ+D + + +++ G + S+ T++ L+ + KAG +E
Sbjct: 346 YSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELAL 405
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M VTYN +I A + ++ +F M+ P VT +L+ +Y
Sbjct: 406 ELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSY 465
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
G+ + + D + FN ++D + L + QQ
Sbjct: 466 EKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQ 518
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q +K E+FQ MV +GC+ + ++++L+SA ++G ++ A L M C P+
Sbjct: 361 GKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGE-GCIPN 419
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI +C + ++K + M G P+ VT+ LI +Y + +
Sbjct: 420 TVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYE 479
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
+M + C+PD N + +G I K FQ A
Sbjct: 480 QMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQA 519
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+ +++T+ L++ K G+ +M++ +VTYN +ID +G+ G +Q
Sbjct: 241 IERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGI 300
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ LM++E ++P T +L+ A G+P + +V + + + + +N L+ AY
Sbjct: 301 KVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAY 360
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G+ ++ V + M +GC+ +TY +++ A G A E + E E C+
Sbjct: 361 GKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFN--EMAGEGCI 417
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 41/364 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AH+L M +GCD + S+T L+S+ + G +A L P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF------TP 244
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y+ LI K + F++ LL +M +GI PN ++Y T+I+A A L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304
Query: 122 VKMLSEDCEPDVWTMNCTLRAF----GNSGQIDTMEK----------------------- 154
KM + C P++ T ++ F G+ +D ++
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364
Query: 155 --------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ + + G P++ T++ L+D Y KAG + S V +M + +V Y
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++D R Q L M+ E P+ VT + ++ +G+ + V + N
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S +T +N L+D+ + + F E G+++ M+ RG + + VTY T++ Y GM
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 327 AKEF 330
A E
Sbjct: 545 ALEL 548
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 1/326 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A + + M+ EG N ++ AL+ A S+ M+ C P+V TYS
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-INGCCPNVRTYSA 391
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA D + + M T G PN V Y ++D R MF + + M E+
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ T N ++ SG++D K +++ ++G P+ T+N LLDS K F +
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M+ +VTYN +I + AG L + L M KP +T+ ++ AY
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK ++ + D + + L+ E L M G P+
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLV 334
T+ +VR +N + A +F D V
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLDAV 657
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 8/320 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L Q M EG + F +++ +Y R+G ++A M++ +P V Y+ ++ +
Sbjct: 98 LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHILDAL 156
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
L F + + S+M G+ PN TYN L+ A + LV+M S+ C+PD
Sbjct: 157 LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ + + G++ + F PS+ +N L++ K FE+ +++
Sbjct: 217 VSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDE 271
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG-HAG 252
M +++Y +I+A AG+++ + M + P+ T SL++ + G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
E L R I ++ + V +N L+ + + V M+ GC P+ TY
Sbjct: 332 SHEALDFWDRMI-REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYS 390
Query: 313 TMVRAYSTNGMKNHAKEFQD 332
++ Y+ G + A E +
Sbjct: 391 ALIDGYAKAGDLDGASEVWN 410
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 5/268 (1%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++I+ D VQ LL M +GI + + ++I +Y RA + T +M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+P V N L A + + + Y + G++P++ T+NILL + K
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++ M V+Y +I + + G +K+ L + PS +L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNAL 252
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ E+ +L + N I + + + +++A VL M RGC
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
P+ T+ ++++ + G + A +F D
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 176 DSYGKAGHFEKMSAVMEYMQKY----HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
D + H ++ +EY + + T +TY ++I+ ++ ++YL + M+
Sbjct: 45 DVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
E I S S++ +Y AG E+ + + + +N ++DA F
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ + M++ G +P+ TY +++A N + A + LVE + C
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL--LVEMSSKGC 212
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 4 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 62
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 63 TLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 122
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 123 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 182
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 183 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 242
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 243 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 278
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LLS Y + F +A S+ M+ C
Sbjct: 32 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVENKKFLEALSVFSEMREIK-CL 90
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 91 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 150
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 151 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 210
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 211 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 266
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 267 RDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMR 326
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 327 GLGYFPDSDVIAIVLNAY 344
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N + FG + + ++AG+ P+ +++ LL Y + F + +V
Sbjct: 21 PDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVENKKFLEALSV 80
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M++ + T NI+ID +G+ G K+ + LF MR I+P+ V+ +L+R YG
Sbjct: 81 FSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGD 140
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + + R + +I + V +N ++ YG+ + +++ MQ RG +P+ +T
Sbjct: 141 AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 200
Query: 311 YRTMVRAYSTNG-MKNHAKEFQDL 333
Y T++ + G + A FQ L
Sbjct: 201 YSTIISIWGKVGKLDRAAMLFQKL 224
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 32/244 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 104 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 162
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFA 115
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ A +F
Sbjct: 163 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 222
Query: 116 EMELTLV------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
++ + V ++L E PD + + +G+I+
Sbjct: 223 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEE 282
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + AG I F ++ K + + V + M+ Y IV++
Sbjct: 283 ATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLN 342
Query: 212 AFGR 215
A+G+
Sbjct: 343 AYGK 346
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 174 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GVEID 232
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 233 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 288
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + D+ + + + + ++K + G P + I+L++YGK
Sbjct: 289 QAVDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQ 348
Query: 183 HFEKMSAVMEYMQK 196
F+K + V MQ+
Sbjct: 349 EFDKANDVYMEMQE 362
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 155/326 (47%), Gaps = 1/326 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+++ M+ N +F +++ + G F KA ++E MK P V TY+ +I
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK-AWGFSPSVITYNTII 271
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA K ALL +M + I PN +T+N LID + R + + +M + +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T N + ++G++D +K G++P++ T+N L++ + K ++ +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ + K + ++T+N +IDA+G+AG + L +M + P+ T L+ +
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ + + ++ + + D V +N LVDA + + +L+ M + G P +T
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y ++ Y G A + L+EK
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEK 537
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA L + MV + N +F L+ + R A + E M+ Q
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ-GLQ 331
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI D+ L MS G++PN VTYN LI+ + + KM E
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + P+V T N + A+G +G++D G+ P+++T+N L+ + +
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ + + M+ +VTYNI++DA + G+ ++ L M + PS +T
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ Y G +V ++ + V +N L+ + E +L M
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571
Query: 301 QRGCKPDKVTY 311
++G P++ TY
Sbjct: 572 EKGLIPNRTTY 582
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +KA ++ + M G + ++ ++ Y ++G KA +LL+ M
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV-AKRIH 296
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T++ILI + + + +M QG++PN VTYN+LI+ E
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
KM +P+V T N + F + + + G+ P++ TFN L+D+YGK
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M + TYN +I F R G++K+ L + M +K VT
Sbjct: 417 AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVT 476
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV A G+ K +L + + + +N L+D Y R V +M+
Sbjct: 477 YNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLME 536
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
++G + + VTY +++ + G +E L+ +M E L R +
Sbjct: 537 KKGRRANIVTYNVLIKGFCNKG---KLEEANRLLNEMLEKGLIPNRTTY 582
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 85/332 (25%)
Query: 48 SLLEHMKNTPDCQPD------------------VNTYSILIKSCLKAFAFDKVQALLSDM 89
SLL+H+ N+ + QPD V + L+ A ++K++ALL
Sbjct: 75 SLLQHLFNS-EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF 133
Query: 90 STQGIRPNTVTYNTL--IDAYGRAKMF------------AEMELTL----------VKML 125
+ N+ +++L + ++G A EM+L L ++
Sbjct: 134 AKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLS 193
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ C P L + G+I +E Y++ I ++ TF+++++ K G F+
Sbjct: 194 ALSCNP-------MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K V+E M+ + +S +++TYN +ID + +AG + + + L + M ++RI P+ +T
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT----- 301
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
FN L+D + R + K V E MQ++G +
Sbjct: 302 ------------------------------FNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P+ VTY +++ +NG + A QD + M
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 111/235 (47%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G R + ++ N ++ + + +E +M+ +V T + + G+
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E ++ G PS+ T+N ++D Y KAG K A+++ M +T+NI+ID
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F R ++ + +F M+ + ++P+ VT SL+ GK ++ + + + +
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V +N L++ + + K E + +L+ + +RG P+ +T+ T++ AY G + A
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+ ++I K F K ++ DM G P+ +TYNT+ID Y +A + + L
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+++ I P+ TFNIL+D + +
Sbjct: 288 KEMVAKR-----------------------------------IHPNEITFNILIDGFCRD 312
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ V E MQ+ +VTYN +I+ G L + L M +KP+ VT
Sbjct: 313 ENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTY 372
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + ++ +L I + + + FN L+DAYG+ + + +M
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLD 432
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G P+ TY ++ + G + KE + L ++M+ L
Sbjct: 433 TGVCPNVSTYNCLIVGFCREG---NVKEARKLAKEMEGNGL 470
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 13/347 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDC 59
GKC A +F+ M G + + ++ +L + F +A + E + K +P
Sbjct: 188 GKCNN---AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-L 243
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD Y ++I KA ++K + + S M +G+ +TVTYN+L+ + E+
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSK 300
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M D +PDV + ++A+G + + + +E+ AG++P+ +NILLD++
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G E+ V + M++ + +Y ++ A+ A D++ E F+ ++ + +P+ V
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ Y A EK+ V + S I + ++DA GR K F G + M
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
+ G PD+ ++ ST AKE + +ET + R
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKELTGI---RNETATIIAR 524
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+LI + K F+ + +LS +S G PN ++Y L+++YGR E +M S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L+ F + E+ +E + + ++P +++++ Y KAG++
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
EK V M + VTYN ++ +F + K++ ++ M+ I+P V+ L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ SV + ++ + +N L+DA+ + K V + M++
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD +Y TM+ AY A++F
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKF 406
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G+F V+ + K + +++Y +++++GR G E +FR M+
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLK 287
S +PS +T +++ + K ++ V + S + D ++ ++ Y +
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + V M +G VTY +++
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLM 289
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 187 MSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+S ++E++ +Y W + + ++I A+G+ G+ E + ++ P+ ++ +L
Sbjct: 122 VSEILEWL-RYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQ 301
+ +YG GK ++ R + +S + + ++ + F E + V E + ++
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
KPD+ Y M+ Y G A++ F +V K
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK 276
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 152/320 (47%), Gaps = 7/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLL-EHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
G + + LL+ + L D+A L EH++ P PDV +++ILI+ + D
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE--PYFVPDVYSFNILIRGLCRIGEID 231
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCT 139
K +M G P+ V+YNTLI+ + R ++ +L ML + PDV T
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + G + + +++ S+GI+P+ TFN+L+D +GK G+ + E M
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VT+ +ID + R G++ Q L+ M+ + P+ T L+ A + + +
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
LR + +S+++ +N ++D + + E ++ MQ++ C+PDK+T+ ++
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG-- 469
Query: 320 TNGMKNHAKEFQDLVEKMDE 339
N MK E KM E
Sbjct: 470 -NCMKGRMVEAISTFYKMIE 488
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 5/350 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K ++A LF+ ++ + SF L+ R G DKAF ++M N C
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF-GCF 246
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALL-SDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEME 118
PD+ +Y+ LI + K LL DM +G+ P+ +TY ++I Y + M A E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+S +P+ +T N + FG G + + YEK G P + TF L+D Y
Sbjct: 307 L-FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G + + E M+ + S + TY ++I+A + +++ R ++S + P
Sbjct: 366 CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKP 425
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ + AGK ++ ++ + D + F L+ E
Sbjct: 426 FIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYK 485
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEKMDETCLAMKRP 347
M + C PD++T +++ GM N A + Q ++K++ ++ P
Sbjct: 486 MIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSP 535
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++ L+ + GL D A + + M+ + PD + +L+ S + D + L+
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMR-SDGILPDSSILELLVSSYARMGKLDSAKNFLN 168
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
++ GI+ + YN L++ + + E L + L PDV++ N +R G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTY 206
+ID + ++ + G P I ++N L++ + + K ++ E M S ++TY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I + + GD+K LF M S IKP+ T L+ +G G + +
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ D V F L+D Y R + + E M+ R P+ TY ++ A
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 327 AKEF 330
A+ F
Sbjct: 409 ARNF 412
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F +V + K ++ + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMVHLLSKYKKYSNVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSDVIAIVLNAY 361
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 240 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + +DA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAVDA-GEVKDITVFERMVHLLSKYKKYSNVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 303 GC 304
GC
Sbjct: 381 GC 382
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ G FD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGRFDDALSWLQKMEE--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ GI P+ V YN++I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + +K +V+YN
Sbjct: 129 KFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT +++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +T+ ++ ++ +G++ + + ++ G + D+V Y+TM+ Y G+ HA
Sbjct: 249 GIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 153/321 (47%), Gaps = 5/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + + A Q M ++ + ++ L+ + + KA S+ +K + P
Sbjct: 19 FGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRS-GITP 77
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y+ +I KA F + ++L+ +M T G+ PNT++Y+TL+ Y K F E
Sbjct: 78 DLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVF 137
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C D+ T N + +G G +K + + I+P++ ++N LL YG A
Sbjct: 138 AEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRVYGDA 197
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + + MQ+ + +VTYN ++ +G+ + ++ L + M++ I+P+ +T
Sbjct: 198 ELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITY 257
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G GK ++ + + + +S I +D V + ++ Y R A K +L ++
Sbjct: 258 STIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAKRLLHELK- 316
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
+PD + T + + G
Sbjct: 317 ---RPDNIPRDTAIHILAGAG 334
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 153/342 (44%), Gaps = 7/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K ++A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVFAEMREI-QCS 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L I PN V+YNTL+ YG A++F E
Sbjct: 147 LDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I + RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R + + D F ++D + + K ++ + V + M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIEAGEVKDITVFEHMIDLFSKYKKYSNIIEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
G PD ++ AY ++ K + +E DE C+
Sbjct: 383 GIGYFPDSRVIALVLNAYGK--LQEFDKANEVYMEMQDEGCI 422
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ F + L+ ++ + ED C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGRFDD-ALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ S ++T NI+ID +G+ G K+ + LF R I+
Sbjct: 122 TMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKL 280
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 166/405 (40%), Gaps = 73/405 (18%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++P+ +F ++ G + S+ AL+ + + G DKA L M+ P+V
Sbjct: 130 RARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ-GIMPNV 188
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM-------FAE 116
TYS LI K DK + +L M G+RPN +TYN LI Y + M F E
Sbjct: 189 VTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKE 248
Query: 117 MELTLV----------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +L+ M+ + +PDV + L + +G
Sbjct: 249 MSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGC 308
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I M+ + G+ P + FN L+++Y + G +K + E M K + I+T++
Sbjct: 309 IAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFST 368
Query: 209 VIDAFGRAG-----------------------------------DLKQMEYLFRLMRSER 233
VI AF R G DL + + L M S+
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428
Query: 234 IKPSCVT-LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I P C+ S++ G+ + V+ I ++ + + FN LVD Y + E
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 488
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G+L+ M+ G +PD TY T+V Y +G + A F+D++ K
Sbjct: 489 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 533
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 11/339 (3%)
Query: 8 PEKAHELF-QAMVDEGCDANTQSFTALLSAYGRS-------GLFDKAFSLLEHMKNT--P 57
P+ A LF + ++ A + LLSA R+ + A L + M P
Sbjct: 53 PDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACP 112
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ P + TY+ILI +A D + + G+ P+ +YN LID + + +
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 172
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KM + P+V T + + + ++D E+ + AG++P+ T+N L+
Sbjct: 173 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 232
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y +G +++ V + M + N + A + G +K+ +F M + KP
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ +L+ Y AG + ++ + ++ D FN L++AY RL + + E
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
M ++G PD +T+ T++ A+ G + A E F +++
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 6/325 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K+ +F+ M +G + + +F+ ++SA+ R G D A HM +T PD YS
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT-GVPPDTAVYSC 403
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT-LIDAYGRAKMFAEMELTLVKMLSE 127
LI+ K + L+SDM ++GI P + + T +I+ + AE + + ++
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P++ T N + + G + + +S G++P I T+N L+D Y K G +
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + T V+YNI++ +A + +F M + S T +++
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 583
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
++ +L + + ++ D + FN ++ A ++ E K + + G P
Sbjct: 584 LCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPT 643
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQD 332
+TYR M+ TN +K + E D
Sbjct: 644 ILTYRVMI----TNLIKEESFEDAD 664
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 3/278 (1%)
Query: 5 CKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ A ++ ++ G N +F +L+ Y G +A LL+ M++ +PD
Sbjct: 445 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV-GVEPD 503
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ K D L DM + + +V+YN ++ +A+ +
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 563
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + T L + D EK S ++ I TFNI++ + K G
Sbjct: 564 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 623
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + Y TI+TY ++I + + + LF M P L
Sbjct: 624 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 683
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
++R + G+ K G+ L ID I+ + + L+
Sbjct: 684 EIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F M++ G + ++ +L R+ D+A LLE + + + + D+ T++I+I
Sbjct: 558 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM-NVKFDILTFNIVI 616
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ K + + L + +ST G+ P +TY +I + + F + + M C
Sbjct: 617 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 676
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +N +R N G++ K GI P T ++L+ + G + + +
Sbjct: 677 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 736
Query: 191 MEYMQKYHY 199
+ +KY +
Sbjct: 737 LP--EKYRF 743
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 10/331 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDC 59
GKC A +F+ M G + + ++ +L + F +A + E + K +P
Sbjct: 195 GKCNN---AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-L 250
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD Y ++I KA ++K + + S M +G+ +TVTYN+L+ + E+
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSK 307
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M D +PDV + ++A+G + + + +E+ AG++P+ +NILLD++
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G E+ V + M++ + +Y ++ A+ A D++ E F+ ++ + +P+ V
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ Y A EK+ V + S I + ++DA GR K F G + M
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ G PD+ ++ ST AKE
Sbjct: 488 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ +LI + K F+ + +LS +S G PN ++Y L+++YGR E +M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAG 182
S EP T L+ F + E+ +E + + ++P +++++ Y KAG
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++EK V M + VTYN ++ K++ ++ M+ I+P V+
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L++AYG A + E+ SV + ++ + +N L+DA+ + K V + M++
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD +Y TM+ AY A++F
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 187 MSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+S ++E++ +Y W + + ++I A+G+ G+ E + ++ P+ ++ +L
Sbjct: 129 VSEILEWL-RYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 187
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQ 301
+ +YG GK ++ R + +S + + ++ + F E + V E + ++
Sbjct: 188 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 247
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
KPD+ Y M+ Y G A++ F +V K
Sbjct: 248 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK 283
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + F M + G T +F L+ YG +G +++ LLE M + +P++ TY++
Sbjct: 159 QEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNV 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ K ++ M G++P+ VTYNT+ AY + ++ E +++M + +
Sbjct: 219 LVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G+I + + + G+QP++ FN L+ + A + ++
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVN 338
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M+++ ++T++ +++A+ AG + + +F M RI+P L + Y
Sbjct: 339 EVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGY 398
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCK 305
AG+PEK +L + S + V F +++ + GR++ + + E M + G
Sbjct: 399 VRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIK---IFEKMCECGIA 455
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
P+ T+ T++ Y ++E ++E+ +
Sbjct: 456 PNLKTFETLIWGYGEARQPWKSEEVLQIMEEFN 488
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TY+ L+ + FD + +++S + G+ P+++ +N +I+A+ + E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSY 178
KM +P T N ++ +G +G+ + +K E Q ++P++ T+N+L+ ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAW 223
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ K V+ M VTYN + A+ + G+ Q E + M++ ++P+
Sbjct: 224 CNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNE 283
Query: 239 VTLCSLVRAYGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T C ++ Y GK E L V R D + + V FN L+ + + VL
Sbjct: 284 RTCCIIIGGYCKEGKIKEALQFVYRMKD-LGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+M++ G KPD +T+ T++ A+S G + +E F D+V+
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 151/339 (44%), Gaps = 2/339 (0%)
Query: 3 GKCKQPEKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G +PE++ +L + M DE N +++ L+ A+ KA++++ M + QP
Sbjct: 188 GIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVAS-GLQP 246
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ + + + + + ++ +M ++PN T +I Y + E +
Sbjct: 247 DAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFV 306
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M +P++ N ++ F ++ D + + + G++P + TF+ +++++ A
Sbjct: 307 YRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + + M K Y+I+ + RAG+ ++ E + M P+ V
Sbjct: 367 GFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIF 426
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ + AG+ E + + I + F L+ YG + + + VL++M++
Sbjct: 427 TTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+P+K T + A+ G+K A V+ + T
Sbjct: 487 FNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMT 525
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ ++ + G +PS+ T+ LL + HF+ + +++ +++ + +
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID- 265
N VI+AF +G++++ F M+ KP+ T +L++ YG AG+PE+ +L +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + +N LV A+ K + V+ M G +PD VTY T+ AY+ NG +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 326 HAK----EFQDL-VEKMDETC 341
A+ E Q+ V+ + TC
Sbjct: 266 QAEGIILEMQNSNVQPNERTC 286
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M + N ++ ++ Y + G +A + MK+ QP++ ++ L
Sbjct: 266 QAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDL-GLQPNLVVFNSL 324
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK + A D V +L+ M G++P+ +T++T+++A+ A + M+
Sbjct: 325 IKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARI 384
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD + + + +G+ + E+ +G P++ F +++ + AG E
Sbjct: 385 QPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIK 444
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M + + + T+ +I +G A + E + ++M ++P TL + A+
Sbjct: 445 IFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWR 504
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDT 273
G ++ +L + N ++ +T
Sbjct: 505 ATGLKKEANRILSAVKNEEMTHET 528
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 10/331 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDC 59
GKC A +F+ M G + + ++ +L + F +A + E + K +P
Sbjct: 131 GKCNN---AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-L 186
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD Y ++I KA ++K + + S M +G+ +TVTYN+L+ + E+
Sbjct: 187 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSK 243
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M D +PDV + ++A+G + + + +E+ AG++P+ +NILLD++
Sbjct: 244 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 303
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G E+ V + M++ + +Y ++ A+ A D++ E F+ ++ + +P+ V
Sbjct: 304 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 363
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ Y A EK+ V + S I + ++DA GR K F G + M
Sbjct: 364 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 423
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ G PD+ ++ ST AKE
Sbjct: 424 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 454
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+LI + K F+ + +LS +S G PN ++Y L+++YGR E +M S
Sbjct: 87 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 146
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L+ F + E+ +E + + ++P +++++ Y KAG++
Sbjct: 147 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 206
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
EK V M + VTYN ++ +F + K++ ++ M+ I+P V+ L
Sbjct: 207 EKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYALL 263
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ SV + ++ + +N L+DA+ + K V + M++
Sbjct: 264 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 323
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD +Y TM+ AY A++F
Sbjct: 324 FPDLWSYTTMLSAYVNASDMEGAEKF 349
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G+F V+ + K + +++Y +++++GR G E +FR M+
Sbjct: 85 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 144
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLK 287
S +PS +T +++ + K ++ V + S + D ++ ++ Y +
Sbjct: 145 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 204
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + V M +G VTY +++
Sbjct: 205 NYEKARKVFSSMVGKGVPQSTVTYNSLM 232
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 187 MSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+S ++E++ +Y W + + ++I A+G+ G+ E + ++ P+ ++ +L
Sbjct: 65 VSEILEWL-RYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 123
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQ 301
+ +YG GK ++ R + +S + + ++ + F E + V E + ++
Sbjct: 124 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 183
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
KPD+ Y M+ Y G A++ F +V K
Sbjct: 184 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK 219
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 152/320 (47%), Gaps = 7/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLL-EHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
G + + LL+ + L D+A L EH++ P PDV +++ILI+ + D
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE--PYFVPDVYSFNILIRGLCRIGEID 231
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCT 139
K +M G P+ V+YNTLI+ + R ++ +L ML + PDV T
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + G + + +++ S+GI+P+ TFN+L+D +GK G+ + E M
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VT+ +ID + R G++ Q L+ M+ + P+ T L+ A + + +
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
LR + +S+++ +N ++D + + E ++ MQ++ C+PDK+T+ ++
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG-- 469
Query: 320 TNGMKNHAKEFQDLVEKMDE 339
N MK E KM E
Sbjct: 470 -NCMKGRMVEAISTFYKMIE 488
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 5/350 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K ++A LF+ ++ + SF L+ R G DKAF ++M N C
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF-GCF 246
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALL-SDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEME 118
PD+ +Y+ LI + K LL DM +G+ P+ +TY ++I Y + M A E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+S +P+ +T N + FG G + + YEK G P + TF L+D Y
Sbjct: 307 L-FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G + + E M+ + S + TY ++I+A + +++ R ++S + P
Sbjct: 366 CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKP 425
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ + AGK ++ ++ + D + F L+ E
Sbjct: 426 FIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYK 485
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEKMDETCLAMKRP 347
M + C PD++T +++ GM N A + Q ++K++ ++ P
Sbjct: 486 MIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSP 535
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 2/304 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++ L+ + GL D A + + M+ + PD + +L+ S + D + L+
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMR-SDGILPDSSILELLVSSYARMGKLDSAKNFLN 168
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
++ GI+ + YN L++ + + E L + L PDV++ N +R G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTY 206
+ID + ++ + G P I ++N L++ + + K ++ E M S ++TY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I + + GD+K LF M S IKP+ T L+ +G G + +
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ D V F L+D Y R + + E M+ R P+ TY ++ A
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 327 AKEF 330
A+ F
Sbjct: 409 ARNF 412
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 166/405 (40%), Gaps = 73/405 (18%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++P+ +F ++ G + S+ AL+ + + G DKA L M+ P+V
Sbjct: 201 RARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ-GIMPNV 259
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM-------FAE 116
TYS LI K DK + +L M G+RPN +TYN LI Y + M F E
Sbjct: 260 VTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKE 319
Query: 117 MELTLV----------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +L+ M+ + +PDV + L + +G
Sbjct: 320 MSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGC 379
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I M+ + G+ P + FN L+++Y + G +K + E M K + I+T++
Sbjct: 380 IAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFST 439
Query: 209 VIDAFGRAG-----------------------------------DLKQMEYLFRLMRSER 233
VI AF R G DL + + L M S+
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499
Query: 234 IKPSCVT-LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I P C+ S++ G+ + V+ I ++ + + FN LVD Y + E
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 559
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G+L+ M+ G +PD TY T+V Y +G + A F+D++ K
Sbjct: 560 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 604
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 11/339 (3%)
Query: 8 PEKAHELF-QAMVDEGCDANTQSFTALLSAYGRS-------GLFDKAFSLLEHMKNT--P 57
P+ A LF + ++ A + LLSA R+ + A L + M P
Sbjct: 124 PDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACP 183
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ P + TY+ILI +A D + + G+ P+ +YN LID + + +
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KM + P+V T + + + ++D E+ + AG++P+ T+N L+
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y +G +++ V + M + N + A + G +K+ +F M + KP
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ +L+ Y AG + ++ + ++ D FN L++AY RL + + E
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
M ++G PD +T+ T++ A+ G + A E F +++
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 6/325 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K+ +F+ M +G + + +F+ ++SA+ R G D A HM +T PD YS
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT-GVPPDTAVYSC 474
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT-LIDAYGRAKMFAEMELTLVKMLSE 127
LI+ K + L+SDM ++GI P + + T +I+ + AE + + ++
Sbjct: 475 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 534
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P++ T N + + G + + +S G++P I T+N L+D Y K G +
Sbjct: 535 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 594
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + T V+YNI++ +A + +F M + S T +++
Sbjct: 595 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 654
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
++ +L + + ++ D + FN ++ A ++ E K + + G P
Sbjct: 655 LCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPT 714
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQD 332
+TYR M+ TN +K + E D
Sbjct: 715 ILTYRVMI----TNLIKEESFEDAD 735
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 3/278 (1%)
Query: 5 CKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ A ++ ++ G N +F +L+ Y G +A LL+ M++ +PD
Sbjct: 516 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV-GVEPD 574
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ L+ K D L DM + + +V+YN ++ +A+ +
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + T L + D EK S ++ I TFNI++ + K G
Sbjct: 635 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 694
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + Y TI+TY ++I + + + LF M P L
Sbjct: 695 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 754
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
++R + G+ K G+ L ID I+ + + L+
Sbjct: 755 EIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F M++ G + ++ +L R+ D+A LLE + + + + D+ T++I+I
Sbjct: 629 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM-NVKFDILTFNIVI 687
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ K + + L + +ST G+ P +TY +I + + F + + M C
Sbjct: 688 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 747
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +N +R N G++ K GI P T ++L+ + G + + +
Sbjct: 748 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 807
Query: 191 MEYMQKYHY 199
+ +KY +
Sbjct: 808 LP--EKYRF 814
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ KQ + ++L MV +GC NT ++ L+ +YGR+ +A ++ M+ C+P
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEA-GCEP 427
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY LI KA D + M G+ P+T TY+ +I+ G+A
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + C P++ T N + + +T K Y Q+AG QP T++I+++ G
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT- 240
G E+ V MQ+ ++ Y +++D +G+AG++ + ++ M ++P+ T
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 241 ---LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + +R + + L S+L + + T+ +C DA
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ A +K P + D +TY+ ++ + +A F ++ LL +M G +PNTVTYN
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI +YGRA E +M CEPD T + +G +D Y++ Q A
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P T++++++ GKAGH + M + +VT+NI+I +A + +
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 518
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L+R M++ +P VT ++ GH G E+ V + + + D + LVD
Sbjct: 519 LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+G+ + + M Q G +P+ T +++ +
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F E+ L +M+ + C+P+ T N + ++G + +
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q AG +P T+ L+D + KAG + + + MQ+ S TY+++I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ + A E + R + N+ D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V ++ +++ G E +GV MQ++ PD+ Y +V + G + A ++
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 135/305 (44%), Gaps = 5/305 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +++Q M + G +T +++ +++ G++G A L M C P++ T++I+I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMI 506
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ L DM G +P+ VTY+ +++ G E E +M ++
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + +G +G +D + Y+ AG++P++ T N LL ++ + + +
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M ++ TY +++ A M + +LM + P+ + L + A G
Sbjct: 627 LQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLM-AVSGHPAHMFLLKMPPA-GP 684
Query: 251 AGKP--EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + + L F+ + D + +VD + E V EV + PD
Sbjct: 685 DGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDA 744
Query: 309 VTYRT 313
+ ++
Sbjct: 745 LREKS 749
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 185 EKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGRAGDLKQME-------YLFRLMRSERIKP 236
E +S+++ + H + + + +DA+ LKQM+ + + L R K
Sbjct: 298 ENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKH 357
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMK 293
T ++V G+ G+ ++ G + + +D +TV +N L+ +YGR E
Sbjct: 358 DGHTYTTMV---GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAM 414
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
V MQ+ GC+PD+VTY T++ ++ G + A D+ ++M E L+
Sbjct: 415 NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA---MDMYQRMQEAGLS 461
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 1/322 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
EL MV C N +F L+ R+GLF++ +L M C PD+ Y+ +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATII 293
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + +L+ M + G++PN V YNT++ A+ + E E L +M +DC
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + F +G +D + + E+ S G P + T+ +++ + K G ++ +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M V+Y IV+ AG E L M + P+ VT +L+
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 311 YRTMVRAYSTNGMKNHAKEFQD 332
Y ++ A S G N + D
Sbjct: 534 YSSIACALSREGRVNKVIQMFD 555
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A+E+ M G N + +L + + +A LL M DC
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCP 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M + G P+ +TY T+I+ + + + E +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C+P+ + L+ ++G+ E+ + G P+ TFN L++ K
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M S +++Y+ VID G+AG ++ L +M ++ I P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ K+ + I ++ I D V +N ++ + + M
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY +++ ++ G+ AKE Q+L+ ++
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGL---AKEAQELLSEL 627
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ +AM +GC +T + +L+A G D+A LL + C+ D+ +Y+ ++K
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGL 226
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A + V+ L+ +M PN VT+NTLI R +F + L +M C PD+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ G ++ + + S G++P++ +N +L A +++ ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + VT+NI++D F + G + ++ L M S P +T +++ + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ +L+ + + +TV + ++ + + + ++ M Q+GC P+ VT+ T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 314 MVRAYSTNGMKNHAKEF 330
++ G+ A E
Sbjct: 467 LINFLCKKGLVEQAIEL 483
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ M +GC + +L A RSG F + +LE M + C D ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVL 188
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL ++ G + V+YN ++ AK + ++E + +M+ DC
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN V+ A K+ E L M + VT LV +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + + M D + + +++ + + E +L+ M GCKP+ V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ + G A+E
Sbjct: 429 YTIVLKGLCSAGRWVDAEEL 448
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFDKVQALLS 87
++ A+++ Y R+G + + P P+ T+ +++ C + D ++ +L
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALE-VLD 135
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+MS +G P Y+ +++A R+ F L M ++ C D N L A G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D K G + I ++N +L A + + +M+ M + + IVT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I R G +++ + M P +++ G E +L + +
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + V +N ++ + + E + +L M Q+ C D VT+ +V + NG+ +
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375
Query: 328 KEFQDLVEKM 337
E L+E+M
Sbjct: 376 IE---LLEQM 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL MV++G NT ++++ A R G +K + +++K+T +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT-TIRS 564
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K + D+ + M + G PN TY LI + E +
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--- 621
Query: 122 VKMLSEDC 129
++LSE C
Sbjct: 622 -ELLSELC 628
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 1/322 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
EL MV C N +F L+ R+GLF++ +L M C PD+ Y+ +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATII 293
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + +L+ M + G++PN V YNT++ A+ + E E L +M +DC
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + F +G +D + + E+ S G P + T+ +++ + K G ++ +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M V+Y IV+ AG E L M + P+ VT +L+
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 311 YRTMVRAYSTNGMKNHAKEFQD 332
Y ++ A S G N + D
Sbjct: 534 YSSIACALSREGRVNKVIQMFD 555
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A+E+ M G N + +L + + +A LL M DC
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCP 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M + G P+ +TY T+I+ + + + E +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C+P+ + L+ ++G+ E+ + G P+ TFN L++ K
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M S +++Y+ VID G+AG ++ L +M ++ I P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ K+ + I ++ I D V +N ++ + + M
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY +++ ++ G+ AKE Q+L+ ++
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGL---AKEAQELLSEL 627
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ +AM +GC +T + +L+A G D+A LL + C+ D+ +Y+ ++K
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGL 226
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A + V+ L+ +M PN VT+NTLI R +F + L +M C PD+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ G ++ + + S G++P++ +N +L A +++ ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + VT+NI++D F + G + ++ L M S P +T +++ + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ +L+ + + +TV + ++ + + + ++ M Q+GC P+ VT+ T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 314 MVRAYSTNGMKNHAKEF 330
++ G+ A E
Sbjct: 467 LINFLCKKGLVEQAIEL 483
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ M +GC + +L A RSG F + +LE M + C D ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVL 188
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL ++ G + V+YN ++ AK + ++E + +M+ DC
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN V+ A K+ E L M + VT LV +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + + M D + + +++ + + E +L+ M GCKP+ V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ + G A+E
Sbjct: 429 YTIVLKGLCSAGRWVDAEEL 448
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFDKVQALLS 87
++ A+++ Y R+G + + P P+ T+ +++ C + D ++ +L
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALE-VLD 135
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+MS +G P Y+ +++A R+ F L M ++ C D N L A G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D K G + I ++N +L A + + +M+ M + + IVT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I R G +++ + M P +++ G E +L + +
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + V +N ++ + + E + +L M Q+ C D VT+ +V + NG+ +
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375
Query: 328 KEFQDLVEKM 337
E L+E+M
Sbjct: 376 IE---LLEQM 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL MV++G NT ++++ A R G +K + +++K+T +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT-TIRS 564
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K + D+ + M + G PN TY LI + E +
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--- 621
Query: 122 VKMLSEDC 129
++LSE C
Sbjct: 622 -ELLSELC 628
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 6/329 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA ++ + M G N + ++ Y R G F AF + E M + +PD+ Y+IL
Sbjct: 308 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV-SAGLKPDIVIYNIL 366
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + KA DK +L ++ + P TY +++D Y + + ++ +
Sbjct: 367 VHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGL 426
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V + N L + Q++ + + G+ PS + L + Y + G EK
Sbjct: 427 RPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFG 486
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR-AY 248
V + M+K + + IV Y ++ A +G + +F+ + +K + +T C+++ AY
Sbjct: 487 VFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAY 546
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQRGCK 305
AG+ E+ ++ ++ DT+ +N L++AYG +M+ +L M + K
Sbjct: 547 ARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTK 606
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
PD TY T+++ Y+ G A+E FQ L
Sbjct: 607 PDIGTYNTLIQVYAQAGFIPRAEELFQGL 635
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 28/334 (8%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M +EG N +T +L+ + +K S +K +P
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSP----------- 301
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+A K +L +M G+ PN + Y ++D Y R F M+S
Sbjct: 302 ------QAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 355
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ N + AF +G++D E ++ + P+I T+ +LD Y K G+ +K
Sbjct: 356 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 415
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + ++ +V+YN ++ +A ++ + M + + PS +L Y
Sbjct: 416 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGY 475
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC--FAEMKGVLEVMQQ---RG 303
G EK V + + ++ +D V + L+ A C M G EV QQ G
Sbjct: 476 ARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKA-----CCNSGAMHGAAEVFQQITDAG 530
Query: 304 CKPDKVTYRTMV-RAYSTNGMKNHAKEFQDLVEK 336
K +++TY TM+ AY+ G A+E +E+
Sbjct: 531 LKHNQITYCTMLDGAYARAGRVEEAEELVSAMER 564
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +Q E A + M+ G + + +TAL Y R+G +KAF + + MK +
Sbjct: 440 LAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKE-NLAI 498
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID-AYGRAKMFAEMELT 120
D+ Y L+K+C + A + ++ G++ N +TY T++D AY RA E E
Sbjct: 499 DIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEEL 558
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDS 177
+ M + +PD N + A+G SG+ + ME K S +P I T+N L+
Sbjct: 559 VSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQV 618
Query: 178 YGKAGHFEKMSAVMEYMQK 196
Y +AG + + + + +
Sbjct: 619 YAQAGFIPRAEELFQGLAR 637
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 136/307 (44%), Gaps = 20/307 (6%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+ + L+ Y R G A + E M+ + +P+V+ Y+ LI + +A + A
Sbjct: 132 REYGLLVDFYARHGDKVAARATFEAMRAS-HIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +QGI+ N + ++I Y A E K +E+ P N ++A+ +G
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYG-------------------KAGHFEKMS 188
++T+E + + G Q ++ + +L+ + +AG+ K
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKAL 310
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M K+ S + Y +++D + R GD ++ M S +KP V LV A+
Sbjct: 311 DILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAF 370
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+ +K VL I+ + ++ + ++D Y + + V + ++ G +P
Sbjct: 371 CKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGV 430
Query: 309 VTYRTMV 315
V+Y +++
Sbjct: 431 VSYNSLL 437
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 153/379 (40%), Gaps = 54/379 (14%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--------------- 55
A F+AM N +T+L+ AY + + A + E M +
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 56 -------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRP 96
+ P Y+ ++++ +A + V+ALL+ M +G +
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 97 NTVTYNTLIDAYGRAK-------MFAEMELT------------LVKMLSEDCEPDVWTMN 137
N Y T+++ + + F ++++ L +M P+
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYA 329
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ + G K +E SAG++P I +NIL+ ++ KAG +K V+E ++
Sbjct: 330 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 389
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
TI TY ++D + + G++++ +F +++ ++P V+ SL+ A + E
Sbjct: 390 RLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 449
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+L + + ++ + L + Y R + GV + M++ D V Y +++A
Sbjct: 450 RLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKA 509
Query: 318 YSTNG-MKNHAKEFQDLVE 335
+G M A+ FQ + +
Sbjct: 510 CCNSGAMHGAAEVFQQITD 528
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 63 VNTYSILIKSCLKAFAF---------DKV--QALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
VN + ++ K L+ + DKV +A M I+PN Y +LI AY A
Sbjct: 120 VNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEA 179
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+ +MLS+ + + + + ++G + E +EKF++ + P +
Sbjct: 180 RDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVY 239
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N ++ +Y +AG+ E + A++ M++ + + Y V++ F D
Sbjct: 240 NSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD------------- 286
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ C++ ++ AG K +L +D + + + + ++D Y R F
Sbjct: 287 ---EEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTA 343
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V E M G KPD V Y +V A+ G + A
Sbjct: 344 AFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 379
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + F M + G T +F L+ YG +G +++ LLE M + +P++ TY++
Sbjct: 159 QEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNV 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ K ++ M G++P+ VTYNT+ AY + ++ E +++M + +
Sbjct: 219 LVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G+I + + + G+QP++ FN L+ + A + ++
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVN 338
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M+++ ++T++ +++A+ AG + + +F M RI+P L + Y
Sbjct: 339 EVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGY 398
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCK 305
AG+PEK +L + S + V F +++ + GR++ + + E M + G
Sbjct: 399 VRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIK---IFEKMCECGIA 455
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
P+ T+ T++ Y ++E ++E+ +
Sbjct: 456 PNLKTFETLIWGYGEARQPWKSEEVLQIMEEFN 488
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TY+ L+ + FD + +++S + G+ P+++ +N +I+A+ + E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSY 178
KM +P T N ++ +G +G+ + +K E Q ++P++ T+N+L+ ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAW 223
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ K V+ M VTYN + A+ + G+ Q E + M++ ++P+
Sbjct: 224 CNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNE 283
Query: 239 VTLCSLVRAYGHAGK-PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T C ++ Y GK E L V R D + + V FN L+ + + VL
Sbjct: 284 RTCCIIIGGYCKEGKIKEALQFVYRMKD-LGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+M++ G KPD +T+ T++ A+S G + +E F D+V+
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 151/339 (44%), Gaps = 2/339 (0%)
Query: 3 GKCKQPEKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G +PE++ +L + M DE N +++ L+ A+ KA++++ M + QP
Sbjct: 188 GIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVAS-GLQP 246
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ + + + + + ++ +M ++PN T +I Y + E +
Sbjct: 247 DAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFV 306
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M +P++ N ++ F ++ D + + + G++P + TF+ +++++ A
Sbjct: 307 YRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + + M K Y+I+ + RAG+ ++ E + M P+ V
Sbjct: 367 GFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIF 426
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ + AG+ E + + I + F L+ YG + + + VL++M++
Sbjct: 427 TTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+P+K T + A+ G+K A V+ + T
Sbjct: 487 FNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMT 525
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ ++ + G +PS+ T+ LL + HF+ + +++ +++ + +
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID- 265
N VI+AF +G++++ F M+ KP+ T +L++ YG AG+PE+ +L +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + +N LV A+ K + V+ M G +PD VTY T+ AY+ NG +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 326 HAK----EFQDL-VEKMDETC 341
A+ E Q+ V+ + TC
Sbjct: 266 QAEGIILEMQNSNVQPNERTC 286
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M + N ++ ++ Y + G +A + MK+ QP++ ++ L
Sbjct: 266 QAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDL-GLQPNLVVFNSL 324
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK + A D V +L+ M G++P+ +T++T+++A+ A + M+
Sbjct: 325 IKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARI 384
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD + + + +G+ + E+ +G P++ F +++ + AG E
Sbjct: 385 QPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIK 444
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M + + + T+ +I +G A + E + ++M ++P TL + A+
Sbjct: 445 IFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWR 504
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDT 273
G ++ +L + N ++ +T
Sbjct: 505 ATGLKKEANRILSAVKNEEMTHET 528
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M +G + S TAL+ AYGR+ + KA ++ M+ T +P
Sbjct: 153 GKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQ-TSGPEPS 211
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++KS ++ + + +A+ D+ + +P+ ++ +I Y +A +A+
Sbjct: 212 AVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARK 271
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M T N + N ++ ++ Y++ Q ++P + ++++L+ +YG
Sbjct: 272 LFAQMSERGIPLSTVTFNSLMSFETNYKEVSSI---YDQMQRTALKPDVVSYSLLIKAYG 328
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T +YNI+IDAF +G +++ +F+ MR R++P
Sbjct: 329 KARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLC 388
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++V AY +A + R I + + V + L+ Y +L + V E M
Sbjct: 389 SYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERM 448
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ +G +P++ Y T++ + N
Sbjct: 449 RMQGVEPNQTIYTTIMDVHGRN 470
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC--Q 60
G+ KQ KA +F+ M G + + ++ +L ++ + +A ++ E + N +
Sbjct: 188 GRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFK 247
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK----MFAE 116
PD + ++I KA + + + L + MS +GI +TVT+N+L+ K ++ +
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETNYKEVSSIYDQ 307
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M+ T +K PDV + + ++A+G + + + +E+ AG++P+ ++NIL+D
Sbjct: 308 MQRTALK-------PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILID 360
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ +G E+ V + M+++ + +Y ++ A+ A D+ E FR ++ + +KP
Sbjct: 361 AFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKP 420
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V +L++ Y E++ V + + + + ++D +GR F
Sbjct: 421 NVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWF 480
Query: 297 EVMQQRGCKPDK 308
+ M+ RG DK
Sbjct: 481 KEMEARGYPADK 492
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K +A +LF M + G +T +F +L+S + + S+ + M+ T +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETN---YKEVSSIYDQMQRTA-LK 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +YS+LIK+ KA ++ A+ +M G+RP +YN LIDA+ + + E
Sbjct: 315 PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTV 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M EPD+ + + A+ N+ +D EK + + + G++P++ + L+ Y K
Sbjct: 375 FKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSK 434
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ E++ V E M+ Y ++D GR D F+ M +
Sbjct: 435 LNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEA 485
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + K F + + +L M+ +G +P+ ++ L++AYGRAK + + E +M +
Sbjct: 147 MLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTS 206
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L++F + E +E + A +P F++++ Y KAG +
Sbjct: 207 GPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDY 266
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + M + + VT+N ++ + K++ ++ M+ +KP V+ L
Sbjct: 267 AQARKLFAQMSERGIPLSTVTFNSLMSF---ETNYKEVSSIYDQMQRTALKPDVVSYSLL 323
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ +V + ++ + +N L+DA+ E V + M++
Sbjct: 324 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRV 383
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
+PD +Y TMV AY + A++F
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKF 409
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G F + V++YM K Y ++++ +++A+GRA ++ E +FR M+
Sbjct: 145 FLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQ 204
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLK 287
+ +PS VT +++++ K ++ ++ + N + D F+ ++ Y +
Sbjct: 205 TSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAG 264
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+A+ + + M +RG VT+ +++ ++ TN KE + ++M T L +P
Sbjct: 265 DYAQARKLFAQMSERGIPLSTVTFNSLM-SFETN-----YKEVSSIYDQMQRTAL---KP 315
Query: 348 D 348
D
Sbjct: 316 D 316
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 187 MSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+S ++E+++ H+ +++ + + +++ A+G+ GD + E + + M + KPS ++ +L+
Sbjct: 125 VSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALM 184
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE--VMQQRG 303
AYG A + K +V R + S V + ++ ++ + E + + E + ++R
Sbjct: 185 EAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRA 244
Query: 304 C-KPDKVTYRTMVRAYSTNG 322
KPD+ + M+ Y G
Sbjct: 245 SFKPDQKMFHMMIYMYKKAG 264
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 36/353 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------ 55
LG+ K+ E A LF+ + G SF+A++SA GR+ F +A SLL M N
Sbjct: 199 LGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGNFGLEPN 258
Query: 56 -----------------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
C PD TY+ L+K+C+ + + LL
Sbjct: 259 LVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLCRDLL 318
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
++M +GI + TYNT +DA + +M V+M +++ P+V T + + +
Sbjct: 319 AEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMAGYSK 378
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + + Y++ + I+ ++N L+ Y G FE+ + M+ +VT
Sbjct: 379 AERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVT 438
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I+ +GR ++ LF M++ RI P+ +T +L++ Y + V R +
Sbjct: 439 YNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELK 498
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D VF++ L+DA + +L+VM ++G +P+ VTY +++ A+
Sbjct: 499 QEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAF 551
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 139/322 (43%), Gaps = 21/322 (6%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++ L++ Y ++ F+ A ++ + MK+ + D +Y+ L+ F++
Sbjct: 365 NVVTYSTLMAGYSKAERFEDALNIYDEMKHLL-IRLDRVSYNTLVGLYANLGWFEEAVGK 423
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M GI+ + VTYN LI+ YGR + E+ +M + P+ T + ++ +
Sbjct: 424 FKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTK 483
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Y + + G++ + ++ L+D+ K G E +++ M + +VT
Sbjct: 484 GRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVT 543
Query: 206 YNIVIDAFGRAGDLKQMEYLFRL---MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
YN +IDAF L +E +IKPS L + G +++ +L
Sbjct: 544 YNSIIDAFRIGQQLPALECAVDTSFQANEHQIKPSSSRLSAGNFQDQKTGNNDEIMKMLE 603
Query: 263 FI--DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + +M D R F ++ + + MQ+ KP+ VT+ ++ A S
Sbjct: 604 QLAAEKAGLMKK--------DKRSRQDSFYLVQ-IFQKMQEMEIKPNVVTFSAILNACSC 654
Query: 321 NGMKNHAKEFQDLVEKMDETCL 342
+ FQD + +D C+
Sbjct: 655 ------CETFQDASKLLDALCM 670
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+R G +I+ +E+ ++ G ++ +F+ ++ + G+ F + +++ M +
Sbjct: 196 IRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGNFGL 255
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC----VTLCSLVRAYGHAGKPE 255
+VTYN +IDA G G+L E + + + E I C +T SL++ G+ +
Sbjct: 256 EPNLVTYNAIIDA-GAKGELP-FEIVVKFLE-EMIAAGCLPDRLTYNSLLKTCVAKGRWQ 312
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV-MQQRGCKPDKVTYRTM 314
+L ++ I D +N VDA + + ++V M + P+ VTY T+
Sbjct: 313 LCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTL 372
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDE 339
+ YS A+ F+D + DE
Sbjct: 373 MAGYS------KAERFEDALNIYDE 391
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 1/322 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
EL MV C N +F L+ R+GLF++ +L M C PD+ Y+ +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATII 293
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + +L+ M + G++PN V YNT++ A+ + E E L +M +DC
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + F +G +D + + E+ S G P + T+ +++ + K G ++ +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M V+Y IV+ AG E L M + P+ VT +L+
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 311 YRTMVRAYSTNGMKNHAKEFQD 332
Y ++ A S G N + D
Sbjct: 534 YSSIACALSREGRVNKVIQMFD 555
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A+E+ M G N + +L + + +A LL M DC
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCP 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M + G P+ +TY T+I+ + + + E +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C+P+ + L+ ++G+ E+ + G P+ TFN L++ K
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M S +++Y+ VID G+AG ++ L +M ++ I P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ K+ + I ++ I D V +N ++ + + M
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY +++ ++ G+ AKE Q+L+ ++
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGL---AKEAQELLSEL 627
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ +AM +GC +T + +L+A G D+A LL + C+ D+ +Y+ ++K
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGL 226
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A + V+ L+ +M PN VT+NTLI R +F + L +M C PD+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ G ++ + + S G++P++ +N +L A +++ ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + VT+NI++D F + G + ++ L M S P +T +++ + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ +L+ + + +TV + ++ + + + ++ M Q+GC P+ VT+ T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 314 MVRAYSTNGMKNHAKEF 330
++ G+ A E
Sbjct: 467 LINFLCKKGLVEQAIEL 483
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ M +GC + +L A RSG F + +LE M + C D ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVL 188
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL ++ G + V+YN ++ AK + ++E + +M+ DC
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN V+ A K+ E L M + VT LV +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + + M D + + +++ + + E +L+ M GCKP+ V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ + G A+E
Sbjct: 429 YTIVLKGLCSAGRWVDAEEL 448
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFDKVQALLS 87
++ A+++ Y R+G + + P P+ T+ +++ C + D ++ +L
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALE-VLD 135
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+MS +G P Y+ +++A R+ F L M ++ C D N L A G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D K G + I ++N +L A + + +M+ M + + IVT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I R G +++ + M P +++ G E +L + +
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + V +N ++ + + E + +L M Q+ C D VT+ +V + NG+ +
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375
Query: 328 KEFQDLVEKM 337
E L+E+M
Sbjct: 376 IE---LLEQM 382
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL MV++G NT ++++ A R G +K + +++K+T +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT-TIRS 564
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K + D+ + M + G PN TY LI + E +
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--- 621
Query: 122 VKMLSEDCEPDVWTMNCTLRAFG--NSGQIDTMEKCYEKFQSA 162
++LSE C + +R FG N Q + +KC E SA
Sbjct: 622 -ELLSELCSRGALRKH-LMRHFGISNCTQENGKQKCEENLTSA 662
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 157/321 (48%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 69 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I + VT S++ YG + K ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ + +V T N + +G + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 382
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 383 GLGYFPDSNVIALILNAY 400
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + FG + + ++AG+ P+ +++ LL
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 280
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 126/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + +
Sbjct: 160 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIDQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K K L+ +M +GI PN++TY+T+I +G+
Sbjct: 219 VVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 267
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 268 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGEVKDI 355
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 356 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYME 415
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 416 MQEVGC 421
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 143/300 (47%), Gaps = 1/300 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A EL M+ G + +T +L G++ + D+A L MK+ C D TY+ILI
Sbjct: 68 AMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSM-GCPADDYTYAILI 126
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+S + ++ L +M +G P+ Y +ID Y +A + L KML ++
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLA 186
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T+N + A +G+ + + +E+ + +G+ + +FN +LD GKAG
Sbjct: 187 PDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQF 246
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ M+ +T+N +I+ GRA + + + MRS + P T ++ A+
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG K + ++ + + V +N L+DA + + + + + M+++G PD +T
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 9/321 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ A+ D C + A+++AYGRS K + + + +P+ TY +I+S
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQEL-DKHGSKPNAYTYKCVIQSL 59
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+KA LL M G+ P+T+ N ++D G+A M E M S C D
Sbjct: 60 VKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADD 119
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+T +R+ G + + +++ + G PS + ++D Y KAG E V++
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + + T N +I A R G + +F M+ + + V+ +++ G AG
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG- 238
Query: 254 PEKLGSVLRFIDNSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K+G +F+D + I +++ FN L++ GR K +E VL+ M+ G PD T
Sbjct: 239 --KVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFT 296
Query: 311 YRTMVRAYSTNGMKNHAKEFQ 331
Y M+ A++ G N K F+
Sbjct: 297 YTCMIEAFAKAG--NMGKAFE 315
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+CK+ E+A LF M + GC + ++T ++ Y ++G + A +L+ M + + P
Sbjct: 129 LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDK-NLAP 187
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T + LI + + + + M G+ NTV++N ++D G+A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +P+ T N + G + K ++ +SAG+ P + T+ +++++ KA
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ K + M+K S +VTYN++IDA +AG + ++ M+ + I P +T
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITA 367
Query: 242 CSLVRAYG 249
L + G
Sbjct: 368 TVLQQLAG 375
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K +A+++ Q M G + ++T ++ A+ ++G KAF + M+ C
Sbjct: 269 LGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA-GCSA 327
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+V TY++LI + +KA + + + DM +GI P+ +T L G+ K+
Sbjct: 328 NVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKL 379
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 1/322 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
EL MV C N +F L+ R+GLF++ +L M C PD+ Y+ +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATII 293
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + +L+ M + G++PN V YNT++ A+ + E E L +M +DC
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D T N + F +G +D + + E+ S G P + T+ +++ + K G ++ +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M V+Y IV+ AG E L M + P+ VT +L+
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 311 YRTMVRAYSTNGMKNHAKEFQD 332
Y ++ A S G N + D
Sbjct: 534 YSSIACALSREGRVNKVIQMFD 555
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A+E+ M G N + +L + + +A LL M DC
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCP 353
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M + G P+ +TY T+I+ + + + E +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C+P+ + L+ ++G+ E+ + G P+ TFN L++ K
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M S +++Y+ VID G+AG ++ L +M ++ I P+ +
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ K+ + I ++ I D V +N ++ + + M
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY +++ ++ G+ AKE Q+L+ ++
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGL---AKEAQELLSEL 627
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ +AM +GC +T + +L+A G D+A LL + C+ D+ +Y+ ++K
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGL 226
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A + V+ L+ +M PN VT+NTLI R +F + L +M C PD+
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+ G ++ + + S G++P++ +N +L A +++ ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + VT+NI++D F + G + ++ L M S P +T +++ + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ +L+ + + +TV + ++ + + + ++ M Q+GC P+ VT+ T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 314 MVRAYSTNGMKNHAKEF 330
++ G+ A E
Sbjct: 467 LINFLCKKGLVEQAIEL 483
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ M +GC + +L A RSG F + +LE M + C D ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVL 188
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL ++ G + V+YN ++ AK + ++E + +M+ DC
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN V+ A K+ E L M + VT LV +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + + M D + + +++ + + E +L+ M GCKP+ V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ + G A+E
Sbjct: 429 YTIVLKGLCSAGRWVDAEEL 448
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFDKVQALLS 87
++ A+++ Y R+G + + P P+ T+ +++ C + D ++ +L
Sbjct: 81 AYNAMVAGYCRAG---QLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALE-VLD 135
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+MS +G P Y+ +++A R+ F L M ++ C D N L A G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D K G + I ++N +L A + + +M+ M + + IVT+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I R G +++ + M P +++ G E +L + +
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + V +N ++ + + E + +L M Q+ C D VT+ +V + NG+ +
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375
Query: 328 KEFQDLVEKM 337
E L+E+M
Sbjct: 376 IE---LLEQM 382
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL MV++G NT ++++ A R G +K + +++K+T +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT-TIRS 564
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K + D+ + M + G PN TY LI + E +
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--- 621
Query: 122 VKMLSEDCEPDVWTMNCTLRAFG--NSGQIDTMEKCYEKFQSA 162
++LSE C + +R FG N Q + +KC E SA
Sbjct: 622 -ELLSELCSRGALRKH-LMRHFGISNCTQENGKQKCEENLTSA 662
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 2/312 (0%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P+ + + F+++V N +F L+ + G A S L M+ PD TY+
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGF-GLSPDAVTYN 243
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+ + + + +ALL+ M G+ P TYNTL+ AY R + + M +
Sbjct: 244 TLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTAN 303
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSYGKAGHFEK 186
EPD+WT N +G++D + ++ + G + P + T+N L D+ K
Sbjct: 304 GFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSD 363
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++E M++ T+VT+NIVI + G+L+ M + + P +T +L+
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A+ AG K +++ + + LDT N ++ + K + E +G+L+ QRG P
Sbjct: 424 AHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMP 483
Query: 307 DKVTYRTMVRAY 318
D+V+Y T++ AY
Sbjct: 484 DEVSYGTVMAAY 495
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 8/327 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M +G ++ L+SAY R G +A ++E M +PD+ TY++L
Sbjct: 257 EARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTAN-GFEPDLWTYNVL 315
Query: 70 IKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+A D+ L +M G + P+ VTYNTL DA + + ++ L +M +
Sbjct: 316 AAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ + T N ++ G+++ C K G+ P + T+N L+ ++ KAG+ K
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+M+ M + T N V+ + ++ + L + P V+ +++ AY
Sbjct: 436 TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY 495
Query: 249 GHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
E LR D + +N L+ R+ E L + ++G
Sbjct: 496 FKEYNSEP---ALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQD 332
PD TY ++ AY G +A +F +
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHN 579
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 20/345 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC+ A L + M ++G A + ++ + G + A L M + PDV
Sbjct: 357 KCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD-GLAPDV 415
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI + KA K L+ +M +G++ +T T NT++ + K + E + L
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS 475
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
PD + + A+ + + +++ + PSI+T+N L+ + G
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535
Query: 184 F-EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + + E M+K TYNI+I A+ + GDL+ M KP VT
Sbjct: 536 LKEAIDKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCN 594
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGV 295
+L+ GK +K + +D + +N L+ D L FA+M
Sbjct: 595 TLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM--- 651
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ RG +PD TY ++ A S G +E Q+++ K+ E+
Sbjct: 652 ----EARGLQPDAFTYNVVLSALSEAG---RTEEAQNMLHKLAES 689
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 40/249 (16%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE--PDVWTMNCTLRAFGNSGQID 150
G P+T + + AY R ++ + L+ L P + N L A S
Sbjct: 126 GNLPSTPLADAALSAYSRLRL-PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS 184
Query: 151 TMEK--CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + + P+ TFN+L+ ++ G + + MQ + S VTYN
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNT 244
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++A R G L + L M+ + + P+ T
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPT---------------------------- 276
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+N LV AY RL + V+E M G +PD TY + G + A
Sbjct: 277 -------YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329
Query: 329 EFQDLVEKM 337
+D +E++
Sbjct: 330 RLKDEMERL 338
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 9/333 (2%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + KA E M G N ++ ++ Y G + A + + MK +PD
Sbjct: 202 CKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK-CRGVKPD 260
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMEL 119
TY I K ++ +L M G+RP VTYNTLID Y G +M +
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYR- 319
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
KM+ E P V T N + A ++D + ++ G+ P T+NIL++ Y
Sbjct: 320 --DKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G+ +K + + M T VTY +I + G +KQ + LF + + I P +
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ + G ++ ++L+ +D ++ D V FN L+ R + ++E M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ RG KPD ++Y T++ YS G A +D
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 2/247 (0%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
CK E A + + M ++G ++ ++ L++ Y R G KAF+L + M + QP
Sbjct: 345 CKMDE-ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI-SKGIQPTRV 402
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ LI K + L + +GI P+ + +N LID + L +M
Sbjct: 403 TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM 462
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T N ++ G+++ + E+ +S GI+P ++N L+ Y K G
Sbjct: 463 DQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ V + M ++ T++TYN +I + + E L + M S+ I P+ T SL
Sbjct: 523 KDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582
Query: 245 VRAYGHA 251
+ G+
Sbjct: 583 IEGIGNV 589
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + ++A +LF+ +V +G + F AL+ + +G D+AF++L+ M
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM-KVV 468
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ L++ + + + L+ +M ++GI+P+ ++YNTLI Y + +
Sbjct: 469 PDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+MLS P + T N ++ + + D E+ ++ S GI P+ NT+ L++ G
Sbjct: 529 RDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%)
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+C++ + G+ P ++ N +L + K+ EK + M + ++VT+NI+I+
Sbjct: 142 ECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVL 201
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G LK+ + LM + IKP+ VT +++ Y G+ E + + + D+
Sbjct: 202 CKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDS 261
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ + + E G+LE M++ G +P VTY T++ Y G A +++D
Sbjct: 262 YTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 40/308 (12%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y +LI++C + D M +G+ P+ N ++ + ++ + + +M
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL---------- 175
+ V T N + G++ ++ ++ GI+P++ T+N ++
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 176 ----------------DSYG---------KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
DSY K G E+ S ++E M++ T VTYN +I
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Query: 211 DAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
D + G+L +M + +R M E + P+ T L+ A K ++ +++ + +
Sbjct: 304 DGYCNKGNL-EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ D+V +N L++ Y R + + + M +G +P +VTY +++ S G K+
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG---RMKQ 419
Query: 330 FQDLVEKM 337
DL EK+
Sbjct: 420 ADDLFEKI 427
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G+C++ E A EL + M G + S+ L+S Y + G AF + + M +
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI-G 536
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
P + TY+ LI+ K D + LL +M ++GI PN TY +LI+ G +
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 7/319 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 XGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ + AG+ E+ V R ID ++ TVF ++ + K ++ + V + M
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKXITVF-ERMIHLLSKYKKYSNVVEVFDKM 342
Query: 300 QQRGCKPDKVTYRTMVRAY 318
+ G PD ++ AY
Sbjct: 343 RGLGYFPDSDVIAIVLNAY 361
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 138/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G+ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII----------------- 222
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+W G G++D ++K +S+G++ F ++ +Y +AG
Sbjct: 223 ---------SIW---------GKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAG 264
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + + I AG +++ Y+FR + I V
Sbjct: 265 LVAHAKRLLHELKRPDN----IPRDTAIHILAGAGRIEEATYVFR----QAIDAGEVKXI 316
Query: 243 SLVRAYGH-AGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K +V+ D D+ +++AYG+L+ F + V
Sbjct: 317 TVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYME 376
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 377 MQEVGC 382
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 10/337 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK ++ ++A++LF+ +GC ++ ++ + G + A +L + M +P
Sbjct: 40 LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRP 99
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAK-MFAEM 117
V TYS LI + DK LL +M+ +G PN VTYNTL++A GR+K F+ +
Sbjct: 100 TVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLL 159
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK--FQSAGIQPSINTFNILL 175
E +M + C P++ T ++ G+I+ + ++ +G+ P + TFN +L
Sbjct: 160 E----QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D K V + + +VTY+ +ID + + + L M +
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ VT ++V G+ E VLR + ++ + D V +N L+D + + + E G+
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 335
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
L M + G P VTY T+ +G + A E D
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 146/334 (43%), Gaps = 6/334 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ AH +F+ ++ GC N +++ L+ + D+A LL M C+
Sbjct: 217 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCR 275
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ TYS ++ LK + +L M G P+ VTYNTLID + + + E
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 335
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML P V T SG+ D + + + G P+ T++ ++D K
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 395
Query: 181 AGHFEKMSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQM-EYLFRLMRSERIKPSC 238
AG + E M + + ++ Y+ +ID +AG + + E+L R++R+ RI P
Sbjct: 396 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI-PDV 454
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ AG+ + + R + + D V + LVD R E + +
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
M+ G PD+ T RTM+ AK QD
Sbjct: 515 MRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 153/356 (42%), Gaps = 46/356 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-----KN 55
+LG+ + E A L + M GC +F ++ + G + AF +++ M
Sbjct: 146 LLGQGRSKE-AFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGL 204
Query: 56 TPD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQA 84
+PD C+P+V TYS LI K D+
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 264
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LL+ M G R NTVTY+T++D + + + L +M C PD T N + F
Sbjct: 265 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 324
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
++ + AG PS+ T+ L ++G F++ +++YM + +
Sbjct: 325 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 384
Query: 205 TYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK----LGS 259
TY+ ++D +AG + + + Y ++ R E + P + +L+ AGK ++ L
Sbjct: 385 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLER 444
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++R D++ ++ N L DA GR+ E+ M +RGC PD VTY T+V
Sbjct: 445 MIRAGRIPDVVTFSILINGLCDA-GRIDTGLEL---FRGMAERGCVPDMVTYATLV 496
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 4/320 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +KA LF+ MVD+ + ++ AL+ G+ +A+ L E + C P
Sbjct: 5 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR-AKGCHP 63
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY+ +I K + L DM+ G RP VTY+TLID R +
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C P+ T N + A G+ E+ + G P + TF +++ K
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 181 AGHFEKMSAVME--YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G E V++ +M + S ++T+N V+D + + +F+ +P+
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ K ++ +L + +TV ++ +VD ++ + VL
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
M+ GC PD VTY T++ +
Sbjct: 304 MRDAGCLPDAVTYNTLIDGF 323
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K+ DK L M + I P+ VTY LID G+ + E + ++
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFNILLDSYGKAGHFEKM 187
C P V T N + G+I+ Y+ G +P++ T++ L+D + +K
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++E M + VTYN +++A G K+ L M + P +T +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 248 YGHAGKPEKLGSVLR--FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G+ E V+ F+ S + D + FN ++D + + + V + +RGC+
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 306 PDKVTYRTMVRAYSTNGMKNHAK--EFQDLVEKMDE 339
P+ VTY T++ +G+ AK E L+ KM E
Sbjct: 241 PNVVTYSTLI-----DGLSKMAKMDEALQLLAKMVE 271
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 148/328 (45%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++FQ M D GC T +F L+ YG +G ++ +L M +P+ TY+I
Sbjct: 145 KEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNI 204
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ ++ +L M GI+P+ VTYN L AY + E +++M E
Sbjct: 205 LVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEK 264
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + G + + + + G+ P++ FN L+ + + +
Sbjct: 265 VAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVD 324
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M++Y ++T++ +++A+ AG + + + +F M I+P L + Y
Sbjct: 325 EALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGY 384
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+ E SVL + S + + V ++ + K V E M + G P+
Sbjct: 385 VRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNL 444
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
T+ T++ Y+ A+E L+E+
Sbjct: 445 KTFETLIWGYAEARQPGKAEELLQLMEE 472
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TY+ L+ + K F+ + L+S + G++P+++ YN +I+A+ + E
Sbjct: 90 RPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMK 149
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSY 178
KM C+P T N ++ +GN+G+ + K G ++P+ T+NIL+ ++
Sbjct: 150 IFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAW 209
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ E+ V+ M +VTYNI+ A+ + G+ + E L M+ E++ P+
Sbjct: 210 CSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNE 269
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
T +V Y G + LRF+ + + V FN L+ + + +
Sbjct: 270 RTCGIIVNGYCKEG---NMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEA 326
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
L +M++ G KPD +T+ T++ A+S+ G+ + +E F D+ +
Sbjct: 327 LTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAK 367
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 4/320 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K KA E M G N S+ ++ Y G + A +L+ M+ +PD
Sbjct: 187 GKLK---KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR-VKGIEPD 242
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ L M G+ PN VTYNTLID Y
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + P V T N + A G++ + ++ + GI P T+NIL++ Y + G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M T VTY +I R +K+ + LF + + + P +
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + G E+ +L+ +D + D V FN L+ R E + +L+ M+ R
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G KPD ++Y T++ Y G
Sbjct: 483 GIKPDHISYNTLISGYGRRG 502
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 130/326 (39%), Gaps = 38/326 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A LF MV+ G N ++ L+ Y G ++AFS + M
Sbjct: 252 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIM 310
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V+TY++L+ + + ++ +M +GI P+ +TYN LI+ Y R
Sbjct: 311 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDL 370
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+MLS+ EP T + ++ + +EK G+ P + FN ++D +
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVT----------------------------------- 205
G+ E+ +++ M + VT
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I +GR GD+K + M S P+ +T +L++ + + +L+ +
Sbjct: 491 YNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 550
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAE 291
N I D + L++ G + E
Sbjct: 551 NKGISPDDSTYLSLIEGMGNVDTLVE 576
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 2 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 60
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 61 TLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 120
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 121 GIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 180
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + ++ + +D + F ++ A
Sbjct: 181 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVA 240
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 241 YERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAG 276
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A + M+ C
Sbjct: 30 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALXVFSEMREIK-CL 88
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 89 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHL 148
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 149 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 208
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 209 VGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRLLHELK----RPDNIP 264
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K +A + V + M+
Sbjct: 265 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMR 324
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 325 GLGYFPDSNVIAVVLNAY 342
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF ++ L M+ + + +
Sbjct: 102 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQR-KNIEQN 160
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 161 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 220
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G I ++ + + P +IL AG
Sbjct: 221 KLRSTGVEIDQILFQTMIVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 276
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 277 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYANVVEVF 320
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 321 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 361
Query: 303 GC 304
GC
Sbjct: 362 GC 363
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 3/301 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
CD + + T L +G+ D+A L++ M++ + + +V+TY+ L+ C+K
Sbjct: 142 CDVYSYTATISLCIHGQD--VDRALELMQEMRSR-NIERNVHTYTALMNVCIKCGKLPLA 198
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ + M PN VTYNTL+D YG+ + L M E EP + T N + A
Sbjct: 199 LDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIA 258
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
Q Y++ S G P+ T+N L+ +YGK K V + M + + +
Sbjct: 259 CNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRS 318
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TY+ +I A +AG + +F M+ ++ P+ VT SLV A G+ EK V
Sbjct: 319 VITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFE 378
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ D V + L+ AY R + + M +GCKPD + Y ++ G
Sbjct: 379 QMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLWETG 438
Query: 323 M 323
+
Sbjct: 439 I 439
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 9/264 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC + A +++ +M C N ++ L+ YG+ G +++A +L+ MK+ +P +
Sbjct: 191 KCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHE-GVEPVL 249
Query: 64 NTYSILIKSC----LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY+ LI +C A Q LLSD G PN+ TYN LI AYG+ +
Sbjct: 250 RTYNTLIIACNMCNQPREALAVYQRLLSD----GFTPNSTTYNALISAYGKTTQLGKALE 305
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ML ++ + V T + + A +GQ +T + + + Q P+ T+N L+ +
Sbjct: 306 VYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACA 365
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G +EK + V E M + + +VTY +I A+ R G ++ F M + KP +
Sbjct: 366 QGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAI 425
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRF 263
+++ G G L+
Sbjct: 426 VYNAIIDTLWETGIIWAQGKALQL 449
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q KA E++Q M+ + D + ++++L+SA ++G ++ A + M+ C P+
Sbjct: 295 GKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQD-KCVPN 353
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ L+ +C + ++K + M+ G P+ VTY LI AY R + +
Sbjct: 354 TVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFH 413
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
KM + C+PD N + +G I K + F +A
Sbjct: 414 KMCVQGCKPDAIVYNAIIDTLWETGIIWAQGKALQLFMTA 453
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 148/324 (45%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M GC N ++ L++A+ R+G D A ++ M+ + +P++ T++
Sbjct: 27 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 86
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y + E +M
Sbjct: 87 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + A +G ++ + + G++ + TF L+D + K G +
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+K ++V YN +I+ + + G + L R M ++R+KP VT +++ Y
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + ++ D + ++ L+ K + + E M Q G +PD+
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
TY T++ + G A D
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHD 350
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+IL+++ ++ ++ DM G PN VTYNTL+ A+ RA E
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E + +P++ T N + +G+++ K +++ G+ P + ++N LL Y
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + AV M + +VT+ +I A +AG+L+Q L MR ++ + V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G + + + I V +N L++ Y +L + ++ M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ + KPD VTY T++ Y G
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVG 270
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ++F MV EG + S+ LLS Y + G ++ ++ M
Sbjct: 90 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 148
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + KA ++ AL++ M +G+R N VT+ LID + + + L
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M KC GIQPS+ +N L++ Y K
Sbjct: 209 ----------------------------VEEMRKC-------GIQPSVVCYNALINGYCK 233
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + ++ M+ +VTY+ +I + + G+L L + M + + P +T
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+R + + + + D + L+D + + + + + M
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++G PD VTY ++ S + A
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ PN TYN L+ A E + M C P+ T N + AF +G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 149 IDTMEKCYEKFQSAG-IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+D E+ + G +P++ TFN +++ KAG E V + M + + +V+YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ + + G L + +F M + P VT SL+ A AG E+ +++ +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ ++ V F L+D + + + +E M++ G +P V Y ++ Y G + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 328 KEF 330
+E
Sbjct: 241 REL 243
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G+ P++ T+NIL+ + G E+ V+ M+ + VTYN ++ AF RAG+L
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 223 EYLFRLMRSE-RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
E + LMR E KP+ VT S+V AG+ E V + + D V +N L+
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y ++ C E V M QRG PD VT+ +++ A G + ++ LV +M E
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG---NLEQAVALVAQMRERG 181
Query: 342 LAMKRPDF 349
L M F
Sbjct: 182 LRMNEVTF 189
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 23/252 (9%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A +L Q M+ +G + ++++L+ + A L E+M Q
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL-GVQ 323
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K +K +L +M +G+ P+ VTY+ LI+ ++ E
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L K+ ED PD + + D + C K + + LL +
Sbjct: 384 LFKLYHEDPVPD-------------NIKYDALMLCCSKAE-------FKSVVALLKGFCM 423
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ V + M ++ Y+I+I R G++++ + M P+ +
Sbjct: 424 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 483
Query: 241 LCSLVRAYGHAG 252
SLVR G
Sbjct: 484 TISLVRGLFEEG 495
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 143/309 (46%), Gaps = 13/309 (4%)
Query: 22 GCDA----NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
GCD N S+ +++ ++G A L + M P+ TY+ +I +K
Sbjct: 179 GCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKA-VVPNHITYNTMIDGHIKKG 237
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ L S M G++PN +TYN L+ RA E L +M S PD +T +
Sbjct: 238 DLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYS 297
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+G TM +E+ G++ T +ILL+ K G K V++ +
Sbjct: 298 ILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNS 357
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
T V YN +I+ + + GDL+ +F+ M+S I+P +T +L+ G + +
Sbjct: 358 GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEA 417
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ ++ + + FN L+DAYGR KCF +L MQ++G KP+ V+Y +
Sbjct: 418 HDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFI----ILSDMQEKGLKPNVVSYGS 473
Query: 314 MVRAYSTNG 322
+V A+ NG
Sbjct: 474 IVNAFCKNG 482
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 157/338 (46%), Gaps = 38/338 (11%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA E+ Q +V+ G T + L++ Y + G + AFS+ + MK+ +
Sbjct: 337 GLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL-IR 395
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K + L+ +M G+ P+ T+NTLIDAYGRA + +
Sbjct: 396 PDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII 455
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQ--------------------------IDTMEK 154
L M + +P+V + + AF +G+ ID +
Sbjct: 456 LSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIE 515
Query: 155 C---------YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
C EK +S+G+ PSI T+N+L+ K + +++ ++ Y + +++
Sbjct: 516 CGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVIS 575
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I A + + L + M IKPS T L + G AG+ ++ ++ + +
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML 635
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ D++ + +N +VDAY + ++++ + + M +G
Sbjct: 636 DKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 52/357 (14%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L+ M+ G N ++ LLS R+G + ++L+ M + PD TYSI
Sbjct: 240 ESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASR-KMVPDGFTYSI 298
Query: 69 L--------------------IKSCLKAFAF---------------DKVQALLSDMSTQG 93
L +K +K A+ K + +L + G
Sbjct: 299 LFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSG 358
Query: 94 IRPNTVTYNTLIDAY-------GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ TV YNTLI+ Y G +F +M+ L++ PD T N + G
Sbjct: 359 LLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIR-------PDHITYNALINGLGKV 411
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+I + + G+ PS+ TFN L+D+YG+AG EK ++ MQ+ +V+Y
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++AF + G + + + M + + P +++ AY G ++ + + +
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA--YSTN 321
S + V +N L+ + +E + +L+ ++ G PD ++Y T++ A Y +N
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSN 588
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 146/330 (44%), Gaps = 4/330 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF M ++ N ++ ++ + + G + F L M +P+V TY++L+
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH-GLKPNVITYNVLL 265
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+A + A+L +M+++ + P+ TY+ L D + R M + + + +
Sbjct: 266 SGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+T + L G+I E+ + ++G+ + +N L++ Y + G E ++
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ +TYN +I+ G+ + + L M + PS T +L+ AYG
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ EK +L + + + V + +V+A+ + E +L+ M + P
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Y ++ AY G + A F L EKM +
Sbjct: 506 YNAIIDAYIECGSTDQA--FM-LAEKMKSS 532
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 34/267 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------ 55
LGK ++ +AH+L M G + + ++F L+ AYGR+G +K F +L M+
Sbjct: 408 LGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467
Query: 56 ----------------------------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
D P Y+ +I + ++ + D+ L
Sbjct: 468 VVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAE 527
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M + G+ P+ VTYN LI + +E E L + + PDV + N + A
Sbjct: 528 KMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRS 587
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
D + ++ GI+PS T+ +L S G AG +M + + M YN
Sbjct: 588 NTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYN 647
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERI 234
I++DA+ + G+ ++E L + M + I
Sbjct: 648 IMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 39/282 (13%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKM----------------------LSEDCE-- 130
RP+T T+N + A A E L +M DC+
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208
Query: 131 ------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
P+ T N + G +++ + + + G++P++ T+N+LL
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG + +AV++ M TY+I+ D R GD + M LF + +K
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+ GK K VL+ + NS ++ TV +N L++ Y ++ + +
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M+ R +PD +TY ++ G E DLV +M++
Sbjct: 389 MKSRLIRPDHITYNALINGL---GKVERITEAHDLVIEMEKN 427
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSYGKAG 182
+++ PD +T N ++A +G +D + G P+ ++N+++ KAG
Sbjct: 143 LVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAG 202
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + M + +TYN +ID + GDL+ L+ M +KP+ +T
Sbjct: 203 TDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYN 262
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AG+ + +VL + + ++ D ++ L D + R M + E ++
Sbjct: 263 VLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK 322
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
G K T ++ +G + A+E Q LV
Sbjct: 323 GVKIGAYTCSILLNGLCKDGKISKAEEVLQTLV 355
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M +A+ F ++ + + D A +L + M+ T +
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 217
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS LI SCL ++ + LLSDM + I PN VT+N LIDA+ + F E E
Sbjct: 218 PNVVTYSSLI-SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+ +PD++T N + F ++D ++ +E S P ++T+N L+ +
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ E + + M VTY +I GD + +F+ M S+ + P +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + GK EK V ++ S+I LD + +++ + + + +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ VTY TM+ + K +E L++KM E
Sbjct: 457 SLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKE 493
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 38/321 (11%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A +L M+++ + N +F AL+ A+ + G F +A L + M K + D PD+ TY+ L
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID--PDIFTYNSL 296
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I DK + + M ++ P+ TYNTLI + ++K + +M
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T ++ + G D +K +++ S G+ P I T++ILLD G EK
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V +YMQK I Y +I+ +AG + LF + + +KP+ VT
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT--------- 467
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+N ++ + E +L+ M++ G PD
Sbjct: 468 --------------------------YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
TY T++RA+ +G K + E
Sbjct: 502 TYNTLIRAHLRDGDKAASAEL 522
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 136/308 (44%), Gaps = 2/308 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F LLSA + FD SL E M+ ++ TY+ILI + ALL M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G P+ VT ++L++ Y K ++ + +M+ PD T + +
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
++ G QP++ T+ ++++ K G + ++ M+ +V +N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
ID+ + + LF+ M ++ I+P+ VT SL+ G+ +L + I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ V FN L+DA+ + F E + + + M +R PD TY +++ + + + AK+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 330 -FQDLVEK 336
F+ +V K
Sbjct: 312 MFEFMVSK 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EK H+ M+ D + ++ +L++ + DKA + E M + DC PD
Sbjct: 269 GKFVEAEKLHD---DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV-SKDCFPD 324
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY+ LIK K+ + L +MS +G+ +TVTY TLI +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+S+ PD+ T + L N+G+++ + ++ Q + I+ I + +++ KAG
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + +VTYN +I L++ L + M+ + P T
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 243 SLVRAYGHAGKPEKLGSVLR 262
+L+RA+ G ++R
Sbjct: 505 TLIRAHLRDGDKAASAELIR 524
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 140/304 (46%), Gaps = 3/304 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+T ++ + R+GL A + + M C PDV TY+ L+ K + LL++M
Sbjct: 19 YTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 77
Query: 90 STQGIRPNTVTYNTLIDAYG-RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+G+ P+ T+ TLI Y K+ ++L ML++ PD+ T N + G
Sbjct: 78 RERGVPPDLCTFTTLIHGYCIEGKLDKALQL-FDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D ++ S I P+ T++IL+DS+ + G E ++ M I+TYN
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I + R+G++ + + + M ++ P +T +L+ Y K +L ++
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D V +N L++ + E + E M +G +PD+ TY +M+ + T G A
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316
Query: 329 EFQD 332
+ D
Sbjct: 317 QLHD 320
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A L M + G + +FT L+ Y G DKA L + M N +
Sbjct: 60 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR-LR 118
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI + DK L DM ++ I PN VTY+ LID++ +
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 178
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+++ P++ T N ++ + SG + +K +K + P + T+N L+ Y K
Sbjct: 179 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 238
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ M+K +VTYN++I+ F G++++ ++F M ++ I+P T
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298
Query: 241 LCSLVRAYGHAGKPEK 256
S++ + AG ++
Sbjct: 299 YMSMINGHVTAGNSKE 314
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%)
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
A L +M G+ P+ V Y +I + RA + ++ +M+ C PDV T N L
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
++ E + + G+ P + TF L+ Y G +K + + M I
Sbjct: 62 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTYN +ID R GDL + L+ M S I P+ VT L+ ++ G+ E L
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ N I+ + + +N ++ Y R ++ + L+ M PD +TY T++ Y
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241
Query: 324 KNHAKEFQDLVEK 336
+ A + +++EK
Sbjct: 242 MHDAFKLLNMMEK 254
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+++I +A + +M G P+ VTYNTL++ + + + E
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M PD+ T + + G++D + ++ + ++P I T+N L+D +
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +K + + + M VTY+I+ID+ G ++ M ++ I P+ +T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+++ Y +G K L+ + + + D + +N L+ Y + + +L +M+
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ +PD VTY ++ +S +G + +E + EKM C PD
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHG---NVQEAGWIFEKM---CAKGIEPD 295
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E A M+++G N ++ +++ Y RSG K L+ M PD+ TY
Sbjct: 171 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITY 229
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +K LL+ M + ++P+ VTYN LI+ + E KM +
Sbjct: 230 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS 167
+ EPD +T + +G + +++ G P
Sbjct: 290 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ L+ + G A +L E PDV +++++IK K K
Sbjct: 193 GCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQK 252
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M G P+TVT+N L++ RAK ++ L ++ + C P+V T +
Sbjct: 253 ALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVI 312
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G+++ Y + G P++ T+N+L++ YGKAG+ AV + M
Sbjct: 313 SGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL 372
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+VT++ +ID + R G L ++ M I+P+ T C ++ + K + G
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTF---CKQNRSGEA 429
Query: 261 LRFID----NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
L F+ +DI +N ++D + E +L M+++GC+PDK TY ++
Sbjct: 430 LHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILII 489
Query: 317 AYSTNGMKNHAKEFQDLVEKMDET 340
+ MK E KM ET
Sbjct: 490 GHC---MKGRIAEAVTFFHKMVET 510
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 44/329 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +KA EL + M + GC +T + L++ R+ K +L ++ C
Sbjct: 243 GVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCM 302
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ +I KA + A+ +DM G PN VTYN LI+ YG+A
Sbjct: 303 PNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAV 362
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PDV T + + + GQ+D K + + IQP+ +TF I++ ++ K
Sbjct: 363 YQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCK 422
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVT----YNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ + +++K + I YN VID + G + + + M + +P
Sbjct: 423 Q---NRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRP 479
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
T L+ GH K GR+ AE
Sbjct: 480 DKYTYTILI--IGHCMK------------------------------GRI---AEAVTFF 504
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
M + GC PD + + + +GM
Sbjct: 505 HKMVETGCSPDSIVVNSFISCLLKSGMPG 533
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C Q + A +++ M N +F ++ + + +A L+ M D P
Sbjct: 387 RCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQA 446
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ +I K D+ +L +M +G RP+ TY LI + AE K
Sbjct: 447 FIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHK 506
Query: 124 MLSEDCEPDVWTMN----CTLRAFGNSGQIDTMEK 154
M+ C PD +N C L++ G G++D + +
Sbjct: 507 MVETGCSPDSIVVNSFISCLLKS-GMPGEVDHIMR 540
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 163/342 (47%), Gaps = 7/342 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+++ M+ N +F +++ + G F KA ++E MK P V TY+ +I
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK-AWGFSPSVITYNTII 271
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA K ALL +M + I PN +T+N LID + R + + +M + +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T N + ++G++D +K G++P++ T+N L++ + K ++ +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ + K + ++T+N +IDA+G+AG + L +M + P+ T L+ +
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPD 307
G ++ + + ++ + + D V +N LVDA G + + + +M+++G + +
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
VTY +++ + G +E L+ +M E L R +
Sbjct: 512 IVTYNVLIKGFCNKG---KLEEANRLLNEMLEKGLIPNRTTY 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 85/332 (25%)
Query: 48 SLLEHMKNTPDCQPD------------------VNTYSILIKSCLKAFAFDKVQALLSDM 89
SLL+H+ N+ + QPD V + L+ A ++K++ALL
Sbjct: 75 SLLQHLFNS-EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF 133
Query: 90 STQGIRPNTVTYNTL--IDAYGRAKMF------------AEMELTL----------VKML 125
+ N+ +++L + ++G A EM+L L ++
Sbjct: 134 AKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLS 193
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ C P L + G+I +E Y++ I ++ TF+++++ K G F+
Sbjct: 194 ALSCNP-------MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K V+E M+ + +S +++TYN +ID + +AG + + + L + M ++RI P+ +T
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT----- 301
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
FN L+D + R + K V E MQ++G +
Sbjct: 302 ------------------------------FNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P+ VTY +++ +NG + A QD + M
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 111/235 (47%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G R + ++ N ++ + + +E +M+ +V T + + G+
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E ++ G PS+ T+N ++D Y KAG K A+++ M +T+NI+ID
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F R ++ + +F M+ + ++P+ VT SL+ GK ++ + + + +
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V +N L++ + + K E + +L+ + +RG P+ +T+ T++ AY G + A
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ M +G N ++ +L++ +G D+A L + M +P+V TY+ LI
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM-GLKPNVVTYNALI 376
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + + +L D+ +G+ PN +T+NTLIDAYG+A + L ML
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP------------------------ 166
P+V T NC + F G + K ++ + G++
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 167 --------------SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+I T+N+L+ + G E+ + ++ M + TY+I+ D
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 556
Query: 213 FGRAG 217
G
Sbjct: 557 MMEKG 561
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + A L M+D G N ++ L+ + R G +A L + M+ + D
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKAD 473
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMS---TQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+ TY+IL+ + K K LL +M+ +G R N VTYN LI + E
Sbjct: 474 LVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR 533
Query: 120 TLVKMLSEDCEPD 132
L +ML + P+
Sbjct: 534 LLNEMLEKGLIPN 546
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NT 56
++G C++ ++A +L + M G A+ ++ L+ A + G KA LL+ M
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID 106
+ ++ TY++LIK ++ LL++M +G+ PN TY+ L D
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ +VTYN ++ +G+ + ++
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 31 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 89
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 90 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 150 FRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 209
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 210 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 265
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 266 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 325
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 326 GLGYFPDSDVIAIVLNAY 343
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N + FG + + ++AG+ P+ +++ LL Y + F + +V
Sbjct: 20 PDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSV 79
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M++ + T NI+ID +G+ G K+ + LF MR I+P+ V+ +L+R YG
Sbjct: 80 FSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGD 139
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + + R + I + V +N ++ YG+ + +++ MQ RG +P+ +T
Sbjct: 140 AELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 199
Query: 311 YRTMVRAYSTNG-MKNHAKEFQDL 333
Y T++ + G + A FQ L
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKL 223
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + +
Sbjct: 103 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KSIEQN 161
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 162 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 221
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 222 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 277
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 278 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 321
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 322 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 362
Query: 303 GC 304
GC
Sbjct: 363 GC 364
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M +A+ F ++ + + D A +L + M+ T +
Sbjct: 158 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 216
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS LI SCL ++ + LLSDM + I PN VT+N LIDA+ + F E E
Sbjct: 217 PNVVTYSSLI-SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 275
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+ +PD++T N + F ++D ++ +E S P ++T+N L+ +
Sbjct: 276 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 335
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ E + + M VTY +I GD + +F+ M S+ + P +
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + GK EK V ++ S+I LD + +++ + + + +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ VTY TM+ + K +E L++KM E
Sbjct: 456 SLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKE 492
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 38/321 (11%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A +L M+++ + N +F AL+ A+ + G F +A L + M K + D PD+ TY+ L
Sbjct: 238 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID--PDIFTYNSL 295
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I DK + + M ++ P+ TYNTLI + ++K + +M
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T ++ + G D +K +++ S G+ P I T++ILLD G EK
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V +YMQK I Y +I+ +AG + LF + + +KP+ VT
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT--------- 466
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+N ++ + E +L+ M++ G PD
Sbjct: 467 --------------------------YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
TY T++RA+ +G K + E
Sbjct: 501 TYNTLIRAHLRDGDKAASAEL 521
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 6/305 (1%)
Query: 36 AYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKV--QALLSDMSTQ 92
++G+ D A L M K+ P P + ++ L+ + K FD V ALL M
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKL 73
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P+ VT ++L++ Y K ++ + +M+ PD T + +
Sbjct: 74 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
++ G QP++ T+ ++++ K G + ++ M+ +V +N +ID+
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ + LF+ M ++ I+P+ VT SL+ G+ +L + I +
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQ 331
V FN L+DA+ + F E + + + M +R PD TY +++ + + + AK+ F+
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313
Query: 332 DLVEK 336
+V K
Sbjct: 314 FMVSK 318
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EK H+ M+ D + ++ +L++ + DKA + E M + DC PD
Sbjct: 268 GKFVEAEKLHD---DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV-SKDCFPD 323
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY+ LIK K+ + L +MS +G+ +TVTY TLI +
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+S+ PD+ T + L N+G+++ + ++ Q + I+ I + +++ KAG
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + +VTYN +I L++ L + M+ + P T
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 503
Query: 243 SLVRAYGHAGKPEKLGSVLR 262
+L+RA+ G ++R
Sbjct: 504 TLIRAHLRDGDKAASAELIR 523
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 153/303 (50%), Gaps = 3/303 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 14 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 71
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 72 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK 131
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 132 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 191
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LF LM+ + I + VT S++ YG + EK ++++ + N
Sbjct: 192 TLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 251
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 252 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 311
Query: 328 KEF 330
K
Sbjct: 312 KRL 314
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 91 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIK-CL 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 150 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 210 FXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++S P +
Sbjct: 270 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D + F ++ + + K +A + V + M+
Sbjct: 326 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMR 385
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 386 GLGYFPDSNVIALVLNAY 403
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED------------------- 128
+M + + P+ TY+TLI +G+ +F + L+ ++ + +D
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 129 CE-----------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
C+ PD+ N + FG + + ++AG+ P+ ++
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ LL Y + F + +V M++ + T NI+ID +G+ G K+ + LF MR
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I+P+ V+ +L+R YG A + + + +I+ + V +N ++ YG+ +
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 240
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 283
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ Q +
Sbjct: 163 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQ-N 221
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 222 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 281
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 282 KLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 337
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 338 RIEEATYV---------------FRQAIDA-GEVKDIMVFERMIHLFSKYKKYANVVEVF 381
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + GV MQ+
Sbjct: 382 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANGVYMEMQEV 422
Query: 303 GC 304
GC
Sbjct: 423 GC 424
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 6/322 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + +A +L + M GC+ + Q+F ++ ++G +A L + M D
Sbjct: 245 LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML-LRDFTA 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D L+ + D+ +A+LS + PNTV YNTLI+ Y + F E + L
Sbjct: 304 DALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLL 359
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K M+ EPD +T N + G + + + ++ G +P++ T+ IL+D + K
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GHFE+ S V+ M S V YN +I A + G ++ ++ M S+ KP T
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ K E+ + R + ++ +TV +N L+ A+ RL+ + ++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
RGC D +TY +++A G
Sbjct: 540 FRGCPLDNITYNGLIKALCKTG 561
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 1/314 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L++ MV G + + +F ++ + G A L+ M +P+V TY+ILI
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGF 417
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K F++ +++ MS +G+ NTV YN LI A + + +M S+ C+PD+
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+T N + + +++ Y G+ + T+N L+ ++ + ++ ++
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ +TYN +I A + G ++ L M E I PS + L+ ++ GK
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
LR + + D V +N L++ ++ F E + +Q +G PD VTY T
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657
Query: 314 MVRAYSTNGMKNHA 327
++ Y G+ N A
Sbjct: 658 LISRYCYEGLFNDA 671
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ E+A ++ +M +G NT + L+ A + G A + M ++ C+
Sbjct: 416 GFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM-SSKGCK 474
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T++ LI K ++ L DM +G+ NTVTYNTLI A+ R ++ + +
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M C D T N ++A +G + E+ I PSIN+ NIL++S+ +
Sbjct: 535 VGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCR 594
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + M + + IVTYN +I+ + G ++ LF ++++ I P VT
Sbjct: 595 TGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVT 654
Query: 241 LCSLVRAYGHAG 252
+L+ Y + G
Sbjct: 655 YNTLISRYCYEG 666
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 160/391 (40%), Gaps = 75/391 (19%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-------- 53
LG + + +L + M DEGC F ++ YG++GL +A LL M
Sbjct: 104 LGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEP 163
Query: 54 --------------KNTPDCQPD-------------VNTYSILIKSCLKAFAFDKVQALL 86
N P P+ V T+ +++K+ D +LL
Sbjct: 164 TFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLL 223
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
DM+ G PN++ Y LI A E L +M CEPDV T N + +
Sbjct: 224 RDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKA 283
Query: 147 GQIDTMEKCYEKF------QSAGIQ-----------------------PSINT--FNILL 175
G+I K +++ A IQ P+ NT +N L+
Sbjct: 284 GRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLI 343
Query: 176 DSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSER 233
+ Y +G FE+ ++ + M + T+NI+ID + G L +E+L +++ +
Sbjct: 344 NGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK-KG 402
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFA 290
+P+ +T L+ + G E+ V+ + + L+TV +NCL+ A G+++
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+M G M +GCKPD T+ +++ N
Sbjct: 463 QMYG---EMSSKGCKPDIYTFNSLIYGLCKN 490
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L M GC + ++ L+ A ++G +K L+E M + P +N+ +I
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGE-EIFPSINSCNI 587
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S + + L DM +G+ P+ VTYN+LI+ + F E + ++
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
PD T N + + G + + K S G P+ T++IL++ + K
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKMSAVMEYMQKYHYSW 201
GN G+ ++K ++ + G + F +++ YGKAG + +++ Y +
Sbjct: 104 LGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEP 163
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T +YN+V++ K +F M S I P+ T +++A+ + + S+L
Sbjct: 164 TFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLL 223
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
R + + +++ + L+ A E +LE M GC+PD T+ ++
Sbjct: 224 RDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKA 283
Query: 322 GMKNHAKEFQDLVEKMDETCLAM 344
G + A + D + D T A+
Sbjct: 284 GRIHEAAKLHDRMLLRDFTADAL 306
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F+ M G + +S ++ YG +G +A L ++++ + D+ Y+++I
Sbjct: 380 AKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVK-RLDIFAYNVMI 438
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ + + M + P+ TY++++ + + A+ E ++ + D E
Sbjct: 439 NVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVE 498
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D NC L ++ M K +++ G P TFN+++D YGKAG E+
Sbjct: 499 LDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKA 558
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ Q++ S ++++ ++ A+ + D ME M++ S S++ AYG
Sbjct: 559 LKLAQQFG-SADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGK 617
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ EK+ VL ++NS + +D +N L++ YG+ AEM+ + MQ+ G PD+ T
Sbjct: 618 AGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWT 677
Query: 311 YRTMVRAY 318
Y T++R Y
Sbjct: 678 YNTIIRTY 685
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C PE A ++++ M ++ + ++ ++L + L +A + ++N+ D + D
Sbjct: 443 RCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNS-DVELDE 501
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ ++ +C K +++ L +M G P +T+N +ID YG+A M E +K
Sbjct: 502 VMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGM-PERAHKALK 560
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + D + + + A+ ME + Q+AG S+ +N +LD+YGKAG
Sbjct: 561 LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQ 620
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
EK+S V+ M+ + +YNI+I+ +G+ + +ME LFR M+ E + P T +
Sbjct: 621 MEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNT 680
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++R YG A P++ + + ++ I D V + LV + R
Sbjct: 681 IIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFER 722
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 1/314 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + E+A + + + G + ++++AYG++ L+DKA L+E M+ D PD
Sbjct: 162 GQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMRE-EDLVPD 220
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS +I +C + + + ++M I+P + +NTLI YG+AK + +
Sbjct: 221 SITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVIT 280
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C+PD T++ +RA+ +G I + + + AG ++ LL Y K
Sbjct: 281 EMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCN 340
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + M+K + +I F A + +F+ M+ + PS + C
Sbjct: 341 LPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSC 400
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ YG G ++ + + +S LD +N +++ Y R V ++M++
Sbjct: 401 TMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEED 460
Query: 303 GCKPDKVTYRTMVR 316
PD TY +M+R
Sbjct: 461 HLLPDAYTYHSMLR 474
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 1/310 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N ++ + G + K L +C+PD T++ LI S KA D
Sbjct: 9 GNVYAYNIMFKILGARHEWSKIDDFLGGKMQEDECEPDQYTFNTLIMSASKANYVDYATI 68
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
M G+ P+ +TY+ ++ Y R + AE E ML+ + V + + +
Sbjct: 69 TFQLMLQTGVLPSILTYSMMLLLYQRHRKVAEAESVFSHMLNSGVQAVV-AYSVMIALYN 127
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G + E+ + + + P + + L++YG+ G E+ +M+ +++ S +V
Sbjct: 128 REGLFEKSEQIVTEMRRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVEESGMSLGLV 187
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
YN +I A+G+A + L MR E + P +T ++ A G GK ++ S +
Sbjct: 188 GYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEM 247
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+I + FN L+ YG+ K + V+ M++ GCKPD T VRAY G+
Sbjct: 248 KRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLI 307
Query: 325 NHAKEFQDLV 334
E +L+
Sbjct: 308 KDVTEILNLL 317
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 139/301 (46%), Gaps = 2/301 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M ++ C+ + +F L+ + ++ D A + M T P + TYS+++ +
Sbjct: 38 MQEDECEPDQYTFNTLIMSASKANYVDYATITFQLMLQT-GVLPSILTYSMMLLLYQRHR 96
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ +++ S M G++ V Y+ +I Y R +F + E + +M + PD
Sbjct: 97 KVAEAESVFSHMLNSGVQA-VVAYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNWL 155
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L +G G+I+ E+ + + +G+ + +N ++ +YGKA ++K + ++E M++
Sbjct: 156 KQLNTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREE 215
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+TY+ +I A GR G LK+ F M+ IKP+ +L+ YG A E +
Sbjct: 216 DLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGI 275
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V+ + D + V AY R ++ +L +++ G + +Y T++
Sbjct: 276 VRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHV 335
Query: 318 Y 318
Y
Sbjct: 336 Y 336
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK PE+AH+ + + + A+ SF+ L+ AY + F + L M+N
Sbjct: 545 LYGKAGMPERAHKALK-LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNA-GYG 602
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y+ ++ + KA +KV +L+ M G+R + +YN LI+ YG+ M AEME
Sbjct: 603 SSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETL 662
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M E PD WT N +R +G + D ++ Q AGI P T+ IL+ ++ +
Sbjct: 663 FRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFER 722
Query: 181 AGHFEK 186
AG+ ++
Sbjct: 723 AGNIDE 728
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 4/339 (1%)
Query: 1 MLGKCKQPEKAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M+G C + K E F M + +F L+S YG++ + ++ MK
Sbjct: 227 MIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKY- 285
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C+PD T +++ +A V +L+ + G T +Y TL+ Y + + E
Sbjct: 286 GCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEA 345
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M P + + F ++ D + +++ Q AG+ PS+ + ++
Sbjct: 346 LRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYV 405
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
YG G ++ + ++ I YN++I+ + R + +++LM + + P
Sbjct: 406 YGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPD 465
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T S++R P + + + NSD+ LD V NC+++ + EM + +
Sbjct: 466 AYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQ 525
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
M G P +T+ M+ Y GM A + L ++
Sbjct: 526 EMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQ 564
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 2/213 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ H+LFQ M+D G +F ++ YG++G+ ++A L+ + D ++S
Sbjct: 518 EEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSA--DKISFST 575
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + K F ++A L +M G + YN+++DAYG+A ++ L +M +
Sbjct: 576 LVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSG 635
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D+ + N + +G + I ME + Q G+ P T+N ++ +YG A + ++
Sbjct: 636 MRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAV 695
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ MQ S VTY I++ F RAG++ +
Sbjct: 696 YWFKAMQDAGISPDRVTYMILVSTFERAGNIDE 728
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 7/344 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC P++A +F AM G +L+ + + +FD A S+ + M+ P +
Sbjct: 338 KCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQ-VAGVTPSL 396
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ +I + + L + + R + YN +I+ Y R M E + + K
Sbjct: 397 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDM-PEGAIKVYK 455
Query: 124 MLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ ED PD +T + LR E+ Y + +++ ++ N +L++ K
Sbjct: 456 LMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFL 515
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+M + + M Y +T+N++ID +G+AG ++ +L + + ++
Sbjct: 516 PLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQ-QFGSADKISFS 574
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV AY + + L + N+ +N ++DAYG+ ++ VL M+
Sbjct: 575 TLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENS 634
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
G + D +Y ++ Y N M E + L M E + R
Sbjct: 635 GMRMDLASYNILINTYGKNYM---IAEMETLFRTMQEEGVVPDR 675
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 43/259 (16%)
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQI 149
T R N YN + G +++++ L KM ++CEPD +T N + + + +
Sbjct: 4 TGKTRGNVYAYNIMFKILGARHEWSKIDDFLGGKMQEDECEPDQYTFNTLIMSASKANYV 63
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D ++ G+ PSI T++++L Y + + +V +M +V Y+++
Sbjct: 64 DYATITFQLMLQTGVLPSILTYSMMLLLYQRHRKVAEAESVFSHMLNSGVQ-AVVAYSVM 122
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I + R G ++ E + MR + P + YG GK I+ ++
Sbjct: 123 IALYNREGLFEKSEQIVTEMRRNNVTPDRDNWLKQLNTYGQQGK----------IEEAER 172
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
++DTV ++ G V Y +M+ AY + + A
Sbjct: 173 IMDTV-------------------------EESGMSLGLVGYNSMITAYGKACLYDKAAR 207
Query: 330 FQDLVEKMDETCLAMKRPD 348
LVEKM E L PD
Sbjct: 208 ---LVEKMREEDLV---PD 220
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ A ++ + G DKA + + MK C+ TY++LI KA L +M
Sbjct: 9 YNAYINGLMKGGNSDKAEEIFKRMKKDA-CKSTTETYTMLINLYGKAGKSFMALILFHEM 67
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA------F 143
+T +PN TY L++A+ R + + E +M EPDV+ N + F
Sbjct: 68 TTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPF 127
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+G + + Q G +P ++NIL+D+YGKAG + AV + M++ + T+
Sbjct: 128 SRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTM 187
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
++ ++ A+ + G++ + E + M +K + L S++ YG G+ K+ VLR
Sbjct: 188 KSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRV 247
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
++ + D +N L++ YG+ M+ +++ +G KPD VT+ + + AYS
Sbjct: 248 MEKGSYVADISTYNILINRYGQAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYS 303
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + A LF M C N ++TAL++A+ R GL +KA + E M+ +
Sbjct: 50 LYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEA-GLE 108
Query: 61 PDVNTYSILIKSCLKAFAFDKV------QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PDV Y+ L+++ + F + + S M G P+ +YN L+DAYG+A
Sbjct: 109 PDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQ 168
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ E M P + + A+ G ++ E+ + +G++ + +
Sbjct: 169 DDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSM 228
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L+ YG+ G F KM V+ M+K Y I TYNI+I+ +G+AG +++ME F+L+ S+ +
Sbjct: 229 LNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGXIERMEDFFQLLPSKGL 288
Query: 235 KPSCVTLCSLVRAY 248
KP VT S + AY
Sbjct: 289 KPDVVTWTSRMGAY 302
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 25/303 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFS--LLEHMKNTPDC 59
L K +KA E+F+ M + C + T+++T L++ YG++G K+F +L H T C
Sbjct: 16 LMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAG---KSFMALILFHEMTTHKC 72
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY----------- 108
+P++ TY+ L+ + ++ +K + + M G+ P+ YN L++ Y
Sbjct: 73 KPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGY 132
Query: 109 --GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
G A++F+ M+ CEPD + N + A+G +G D E ++ + GI P
Sbjct: 133 PYGAAEIFSLMQ-------HMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITP 185
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
++ + +L +Y K G+ K ++ M K +++ +GR G +ME +
Sbjct: 186 TMKSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVL 245
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
R+M T L+ YG AG E++ + + + + D V + + AY
Sbjct: 246 RVMEKGSYVADISTYNILINRYGQAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYSXK 305
Query: 287 KCF 289
K +
Sbjct: 306 KLY 308
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEME 118
P Y+ I +K DK + + M + T TY LI+ YG+A K F M
Sbjct: 3 NPSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSF--MA 60
Query: 119 LTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L L +M + C+P++ T + AF G + E+ +E+ Q AG++P + +N L+++
Sbjct: 61 LILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMET 120
Query: 178 Y------GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
Y +AG+ + + MQ +YNI++DA+G+AG E +F+ M+
Sbjct: 121 YKFSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKR 180
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I P+ + L AY G K +L + S + L+T +++ YGRL F +
Sbjct: 181 VGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGK 240
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
M+ VL VM++ D TY ++ Y G ++F L+
Sbjct: 241 MEEVLRVMEKGSYVADISTYNILINRYGQAGXIERMEDFFQLL 283
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M ++G + ++ L++ + G D+A L +M + CQP+V T++I+
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNII 158
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + + LLSDM +G P+ VT+N LI+ R + L KM C
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N L F ++D + + S G P I T+N LL + K G +
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 278
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++TYN VID + G ++ L MR + +KP +T SLV
Sbjct: 279 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 338
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ ++ I + + +N ++ + + L M + CKP +
Sbjct: 339 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 398
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY ++ + G+ AKE DL+ ++
Sbjct: 399 TYTILIEGIAYEGL---AKEALDLLNEL 423
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++ +S +++ K + LL +M +G +P+ VTYN LI+ + E L
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M S C+P+V T N LR+ ++G+ EK G PS+ TFNIL++ + G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTL 241
+ ++E M + + ++YN ++ F + + + +EYL +M S P VT
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL-DIMVSRGCYPDIVTY 260
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ A GK + +L + + + +N ++D ++ +L+ M++
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+G KPD +TY ++V S G + A K F DL
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 71/168 (42%)
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
S++ F+ + + K + +++ M+ +VTYN++I+ + G L +
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M S +P+ +T ++R+ G+ +L + V FN L++ R
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+LE M GC P+ ++Y ++ + + A E+ D++
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A +L M +G + ++++L+S R G D+A ++ +P
Sbjct: 302 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL-GIRP 360
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ ++ K+ D+ L+ M ++ +P TY LI+ + E
Sbjct: 361 NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA---- 416
Query: 122 VKMLSEDC 129
+ +L+E C
Sbjct: 417 LDLLNELC 424
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 156/312 (50%), Gaps = 3/312 (0%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFA 78
D + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCD 59
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ K ++ S + GI P+ V YN++I+ +G+A++F E + +M P+ + +
Sbjct: 60 YSKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYST 119
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L + + + + + + + T NI++D YG+ ++ + M+K
Sbjct: 120 LLTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMG 179
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+V+YN ++ +G A + +LFRLM+ + I + VT +++ YG + EK
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++++ + N I +++ ++ ++ +G++ + + ++ G + D+V Y+TM+ AY
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAY 299
Query: 319 STNGMKNHAKEF 330
G+ HAK
Sbjct: 300 ERAGLVAHAKRL 311
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 11/344 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 88 VFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMREIK-CL 146
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 147 LDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 206
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M +D +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 207 FRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 266
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P+ +
Sbjct: 267 VGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPNNIP 322
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K + + V E M+
Sbjct: 323 RDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMISLFSKYKKYTNVVEVFEKMR 382
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV--EKMDETCL 342
G PD ++ AY K H E + V E DE C+
Sbjct: 383 GLGYFPDSNVIAVVLNAYG----KLHKFENANGVYMEMQDEGCV 422
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + FG G D +K + + + ++ L++ K + K ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+++ + +V YN +I+ FG+A ++ L MR + P+ V+ +L+ Y
Sbjct: 67 FSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMYVE 126
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ + SV + +LD N ++D YG+L E + M++ G +P+ V+
Sbjct: 127 NKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVS 186
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
Y T++R Y + A L+++ D
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKD 214
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M +G + S T L+ AYGR + KA ++ M+ T +P
Sbjct: 151 GKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQ-TSGPEPS 209
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++KS ++ + + +A+ D+ + +P+ ++ +I Y +A +A+
Sbjct: 210 PVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARK 269
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M T N + + ++ ++ Y++ Q AG++P + ++++L+ +YG
Sbjct: 270 LFAQMSERKIPLSTVTFNSLMSFETDYKEVSSI---YDQMQRAGMKPDVVSYSLLIKAYG 326
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T +YNI++DAF +G + + +F+ MR R++P
Sbjct: 327 KARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLC 386
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++V AY +A R I + + + V + L+ Y +L ++ V E M
Sbjct: 387 SYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERM 446
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ +G +P++ Y T++ A+ N
Sbjct: 447 RIQGVEPNQTIYTTIMDAHGRN 468
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 13/287 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K +A +LF M + +T +F +L+S + + S+ + M+ +
Sbjct: 257 MYKKAGDYAQARKLFAQMSERKIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQRA-GMK 312
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +YS+LIK+ KA ++ A+ +M G+RP +YN L+DA+ + + E
Sbjct: 313 PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTV 372
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M EPD+ + + A+ N+ ++ EK + + + G++P++ + L+ Y K
Sbjct: 373 FKAMRRHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSK 432
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP---S 237
+ EK+ V E M+ Y ++DA GR D F+ M + P +
Sbjct: 433 LNNVEKVMRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPDQKA 492
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
L SL A PE+ + N I L+ N VD G
Sbjct: 493 KNILLSL------ANTPEEQQEANELVGNGAIQLEVKPDNEEVDDDG 533
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 124/266 (46%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + K F + + +L M+ +G +P+ ++ L++AYGR K + + E +M +
Sbjct: 145 MLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTS 204
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L++ + E +E + +P F++++ Y KAG +
Sbjct: 205 GPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDY 264
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + M + + VT+N ++ D K++ ++ M+ +KP V+ L
Sbjct: 265 AQARKLFAQMSERKIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQRAGMKPDVVSYSLL 321
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ +V + ++ + +N L+DA+ E V + M++
Sbjct: 322 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRV 381
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
+PD +Y TMV AY N A++F
Sbjct: 382 EPDLCSYTTMVLAYVNASDMNGAEKF 407
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 187 MSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+S ++E+++ H+ ++ + + +++ A+G+ GD + E + + M + +PS ++ L+
Sbjct: 123 VSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLM 182
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQR 302
AYG + K +V R + S V + ++ + + E + + E + ++
Sbjct: 183 EAYGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRT 242
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
KPD+ + M+ Y G
Sbjct: 243 SFKPDQKMFHMMIYMYKKAG 262
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 11/339 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q ++A E F+ M++EG T +F ++ YG +G F + SL++ MK C PD
Sbjct: 309 GKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKF--HCAPD 366
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K ++ +M G++P+ V+Y TL+ A+ +M E E +
Sbjct: 367 TRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIA 426
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT--FNILLDSYGK 180
+M D E D +T + R + + + +EK + F+ + ++++ ++ +D+YG+
Sbjct: 427 EMDDNDVEIDEYTQSALTRMYIEA---EMLEKSWSWFRRVHVAGNMSSEGYSANIDAYGE 483
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ + V Q+ + T++ YN++I A+G + ++ LF M S + P T
Sbjct: 484 RGYLSEAERVFICCQEVNKR-TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV+ A P+K L + + + D + + ++ ++ +L + V + M
Sbjct: 543 YNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ +PD V Y ++ A++ G A + VE M E
Sbjct: 603 EYNIEPDVVVYGVLINAFADTGNVQQAMSY---VEAMKE 638
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 51/287 (17%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V Y+I+++ KA + VQ+L +M +GI+P TY TLID Y + + L
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM G+QP T I+L Y KA
Sbjct: 246 GKM-----------------------------------SKIGMQPDEVTTGIVLQMYKKA 270
Query: 182 GHFEKMSAVMEYMQKY---------HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
F+K E+ +K+ H + TYN +ID +G++G +K+ F+ M E
Sbjct: 271 REFQKAE---EFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE 327
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I P+ VT +++ YG+ G+ ++ S+++ + DT +N L+ + +
Sbjct: 328 GIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTM-KFHCAPDTRTYNILISLHTKNNDIERA 386
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ M+ G KPD V+YRT++ A+S M KE ++L+ +MD+
Sbjct: 387 GTYFKEMKGAGLKPDPVSYRTLLYAFSIRRM---VKEAEELIAEMDD 430
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 148/382 (38%), Gaps = 50/382 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + L+ M+ +G ++ L+ Y + GL A L M Q
Sbjct: 196 ILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI-GMQ 254
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMS------------------------------ 90
PD T I+++ KA F K + S
Sbjct: 255 PDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQI 314
Query: 91 -----------TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+GI P TVT+NT+I YG F E+ +L+K + C PD T N
Sbjct: 315 KEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEV-TSLMKTMKFHCAPDTRTYNIL 373
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + I+ +++ + AG++P ++ LL ++ ++ ++ M
Sbjct: 374 ISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMDDNDV 433
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T + + + A L++ FR + S + + AYG G +
Sbjct: 434 EIDEYTQSALTRMYIEAEMLEKSWSWFRRVHVAG-NMSSEGYSANIDAYGERGYLSEAER 492
Query: 260 VLRFIDNSDIMLDTVF-FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V FI ++ TV +N ++ AYG K + + E M G PDK TY T+V+
Sbjct: 493 V--FICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQIL 550
Query: 319 STNGMKNHAKEFQDLVEKMDET 340
++ M + AK + +EKM ET
Sbjct: 551 ASADMPDKAKCY---LEKMRET 569
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 151/361 (41%), Gaps = 50/361 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--- 65
EK+ F+ + G + +++ ++A + AYG G +A + C +VN
Sbjct: 454 EKSWSWFRRVHVAG-NMSSEGYSANIDAYGERGYLSEAERVF-------ICCQEVNKRTV 505
Query: 66 --YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+++IK+ + + +K L M + G+ P+ TYNTL+ A M + + L K
Sbjct: 506 LEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEK 565
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M D + +F GQ++ E+ Y++ I+P + + +L++++ G+
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRS--ERIKPSCVT 240
++ + +E M++ V YN +I + + G L + E ++R L+RS E P T
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYT 685
Query: 241 ------LC---SLVRA-------------------------YGHAGKPEKLGSVLRFIDN 266
LC S+VR Y G+ E+ + + +
Sbjct: 686 SHCMNNLCSERSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 745
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
I+ D + +N ++ Y F E + M G +PD T++++ GM
Sbjct: 746 MRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKK 805
Query: 327 A 327
A
Sbjct: 806 A 806
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 38/279 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PDC 59
G K EKA ELF++M+ G + ++ L+ + + DKA LE M+ T DC
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDC 575
Query: 60 -------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+PDV Y +LI + + + +
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML---SEDCEPDVWTMNCTLRAFGN 145
M GI N+V YN+LI Y + E E K+L +E PDV+T +C
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSHCMNNLCSE 695
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ E +E + + + TF ++L Y K G FE+ + + + M++ ++
Sbjct: 696 RSMVRKAEAIFESMKQRR-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLS 754
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
YN V+ + G K+ F+ M S I+P T SL
Sbjct: 755 YNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 3/190 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ-PDVNTY 66
++A +AM + G N+ + +L+ Y + G D+A ++ + ++ + Q PDV T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTS 686
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ C + K +A+ M Q N T+ ++ Y + F E +M
Sbjct: 687 HCMNNLCSERSMVRKAEAIFESMK-QRREANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 745
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + N L + G+ + +++ S+GIQP +TF L K G +K
Sbjct: 746 MRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKK 805
Query: 187 MSAVMEYMQK 196
+E ++K
Sbjct: 806 AVRKIEEIRK 815
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 148/324 (45%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M GC N ++ L++A+ R+G D A ++ M+ + +P++ T++
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y + E +M
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + A +G ++ + + G++ + TF L+D + K G +
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+K ++V YN +I+ + + G + L R M ++R+KP VT +++ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + ++ D + ++ L+ K + + E M Q G +PD+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
TY T++ + G A D
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHD 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+IL+++ ++ ++ DM G PN VTYNTL+ A+ RA E
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E + +P++ T N + +G+++ K +++ G+ P + ++N LL Y
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + AV M + +VT+ +I A +AG+L+Q L MR ++ + V
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G + + + I V +N L++ Y +L + ++ M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ + KPD VTY T++ Y G
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVG 412
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ++F MV EG + S+ LLS Y + G ++ ++ M
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 290
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + KA ++ AL++ M +G+R N VT+ LID + + + L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M KC GIQPS+ +N L++ Y K
Sbjct: 351 ----------------------------VEEMRKC-------GIQPSVVCYNALINGYCK 375
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + ++ M+ +VTY+ +I + + G+L L + M + + P +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+R + + + + D + L+D + + + + + M
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++G PD VTY ++ S + A
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V N L A ++ + + + G+ P++ T+NIL+ + G E+ V
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTLCSLVRAYG 249
+ M+ + VTYN ++ AF RAG+L E + LMR E KP+ VT S+V
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AG+ E V + + D V +N L+ Y ++ C E V M QRG PD V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
T+ +++ A G + ++ LV +M E L M F
Sbjct: 295 TFTSLIHATCKAG---NLEQAVALVAQMRERGLRMNEVTF 331
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A +L Q M+ +G + ++++L+ + A L E+M Q
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL-GVQ 465
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K +K +L +M +G+ P+ VTY+ LI+ ++ E
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L K+ ED PD + + D + C K + + LL +
Sbjct: 526 LFKLYHEDPVPD-------------NIKYDALMLCCSKAE-------FKSVVALLKGFCM 565
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ V + M ++ Y+I+I R G++++ + M P+ +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625
Query: 241 LCSLVRA 247
SLVR
Sbjct: 626 TISLVRG 632
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 44/357 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K+ E A +LF+ G SF+A++SA GR+ F +A SLL M +P
Sbjct: 200 LGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGKF-GLEP 258
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLID---AYGRAKMFAEM 117
++ TY+ +I + K F+ V L +M G P+ +TYN+L+ A GR K+ ++
Sbjct: 259 NLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWKLCRDL 318
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE-KFQSAGIQPSINTFNILLD 176
L +M + DV+T N + A G++D + + + I P++ T++ L+
Sbjct: 319 ---LAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTLMA 375
Query: 177 SYGKAGHFE-------KMSAVMEYMQKYHYS----------W------------------ 201
Y KA FE +M ++ + + Y+ W
Sbjct: 376 GYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKN 435
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+VTYN +I+ +GR +++ LF M++ RI P+ +T +L++ Y + V
Sbjct: 436 DVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVY 495
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
R + + D VF++ L+DA + +L+VM ++G +P+ VTY +++ A+
Sbjct: 496 RELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAF 552
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++ L++ Y ++ F+ A ++ + MK+ + D +Y+ L+ F++
Sbjct: 366 NVVTYSTLMAGYSKAERFEDALNIYDEMKHLL-IRLDRVSYNTLVGLYANLGWFEEAVGK 424
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M GI+ + VTYN LI+ YGR + E++ +M + P+ T + ++ +
Sbjct: 425 FKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKIYTK 484
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Y + + G++ + ++ L+D+ K G E +++ M + +VT
Sbjct: 485 GRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVT 544
Query: 206 YNIVIDAFGRAGDLKQME 223
YN +IDAF L +E
Sbjct: 545 YNSIIDAFKIGQQLPALE 562
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+R G +I+ +E+ ++ G ++ +F+ ++ + G+ F + +++ M K+
Sbjct: 197 IRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGKFGL 256
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC----VTLCSLVRAYGHAGKPE 255
+VTYN +IDA G G+L E + + + E I C +T SL++ G+ +
Sbjct: 257 EPNLVTYNAIIDA-GAKGELT-FEIVVKFLE-EMIAAGCMPDRLTYNSLLKTCVAKGRWK 313
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV-MQQRGCKPDKVTYRTM 314
+L ++ I D +N VDA + + ++V M + P+ VTY T+
Sbjct: 314 LCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTL 373
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ YS A+ F+D + DE + R D
Sbjct: 374 MAGYS------KAERFEDALNIYDEMKHLLIRLD 401
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 14/348 (4%)
Query: 6 KQPEKAHELFQAMVD---EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M D C N S+ +++ + G DKA++L M + QP+
Sbjct: 179 KRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDR-GIQPN 237
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I KA D+ + + M +G++P+ TYN LI Y + E+ L
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + +PD +T L N+G+ ++ GI+P++ + IL+ Y G
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+M ++ M + S +NI+ A+ + + + ++F M+ + + P V
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFG 417
Query: 243 SLVRAYGHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A G+ + +VL+F + N + + FN LV + + + K M
Sbjct: 418 ALIDALCKLGRVDD--AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+G +PD V + T++ T G A+ DL+E++ RPD
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG------TRPD 517
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +FQ M+D+G + ++ L+ Y G + + +LE M + +P
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKP 306
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY L+ + + M +GI+PN Y LI Y +EM L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ PD N A+ ID + K + G+ P + F L+D+ K
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + M + I +N ++ ++ + + M ++ I+P V
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ K ++ ++ D + + L+ + + E L+VM
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G KPD+ TY T++ Y G
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAG 567
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q KA L M G + S+T L+ + G D+A L+ M + +PD TY
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTY 556
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ +A D + +M GI P VTY+T++ + F+E + + M++
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ ++W N L + +D K ++ S Q I TFNI++ + K+G E
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + Y + TY ++ + G L++ + LF M P+ L +LVR
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLD 272
H G + G+ L +D + L+
Sbjct: 737 RLLHRGDITRAGAYLSKLDEKNFSLE 762
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
E F ++ G N LL + +A +L +K P+ C PDV +Y
Sbjct: 111 EHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL--IKRMPELGCTPDVVSY 168
Query: 67 SILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ L+K C + A + ++ L ++D + PN V+Y T+I+ + + ++
Sbjct: 169 NTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLE 228
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ +P+V T + + +D E +++ G++P +T+N L+ Y G
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++++ ++E M + TY +++ G ++ + F M + IKP+
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGI 348
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G ++ +L + + + D FN + AY + E + M+Q+G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 304 CKPDKVTYRTMVRA 317
PD V + ++ A
Sbjct: 409 LSPDVVNFGALIDA 422
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C++ A F +M+ +G N + L+ Y G + LL M PD
Sbjct: 322 GRCRE---ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPD 377
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I+ + K D+ + + M QG+ P+ V + LIDA + + L
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFN 437
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E P+++ N + + + ++ Y + + GI+P + FN +L + G
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K +++ M++ +++Y +I G + + +M S +KP T
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y AG+ + V R + + I V ++ ++ + F+E K + M
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G + + Y ++ S N + A K FQ L K
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 8/328 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQ---SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ E LF M+ E T +++ L+ + R G + F+ + + ++
Sbjct: 71 ESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+L C + + L+ M G P+ V+YNTL+ + K AE L L+
Sbjct: 131 VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKR-AEEALELLH 189
Query: 124 MLSE----DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+++ C P+V + + F GQ+D + + GIQP++ T+ ++D
Sbjct: 190 MMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA ++ V + M TYN +I + G K++ + M + +KP C
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ + G+ + + I + + L+ Y +EM +L +M
Sbjct: 310 TYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ G PD + + AY+ M + A
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 14/336 (4%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY-SILIKSC 73
F M++EG N F +L+ ++KA M N +PDV + +IL C
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-GIRPDVVFFNTILCNLC 494
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K K Q L+ M G RP+ ++Y TLI + E +L MLS +PD
Sbjct: 495 TKGQVM-KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
WT N L + +G+ID + + GI P + T++ +L F + +
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M W I YNI+++ + + + LF+ + S+ + T ++ A +G+
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY----GRLKCFAEMKGVLEVMQQRGCKPDKV 309
E + I + ++ D VF CL+ G L+ F ++ M++ G P+
Sbjct: 674 NEDAMHLFATISSYGLVPD-VFTYCLIAENLIEEGYLEEFDDL---FSAMEKSGTTPNSR 729
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
+VR G A + + K+DE +++
Sbjct: 730 MLNALVRRLLHRGDITRAGAY---LSKLDEKNFSLE 762
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++A +LFQ++ + +F ++ A +SG + A L + ++ P
Sbjct: 633 LSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI-SSYGLVP 691
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
DV TY ++ ++ ++ ++ L S M G PN+ N L+
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 163/341 (47%), Gaps = 9/341 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA + Q ++ +G + ++ L++ ++G A LL+ M+ + QP++ YS L
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSAL 201
Query: 70 IKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I C F D + L S + +GI + VTYN+LID + E+ L KM+ E+
Sbjct: 202 IDGLCKDGFVSDAL-GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD +T N + A G+I + G +P I T+N L++ Y + +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M K ++ YN++ID + + + + LF+ + ++ + P+ + SL+
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++G+ + +L + S D V +N L+DA + E GVL +M ++G KP+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
VTY M+ Y ++N+ +D+ +M ++ L PD
Sbjct: 441 VTYNAMMDGYC---LRNNVNVAKDIFNRMVKSGL---EPDI 475
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 153/330 (46%), Gaps = 2/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ +L MV E D + +F L+ A + G +A +L M + +PD+ TY+
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNA 305
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ + + L + M +G+ P+ + YN LID Y + KM E + ++ +++
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + + N + NSG+I ++K ++ + P + T+NIL+D+ K G +
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M K IVTYN ++D + ++ + +F M ++P + L+ Y
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++ + + + + +++ D +N L+D L ++ +L+ M G PD
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 309 VTYRTMVRAY-STNGMKNHAKEFQDLVEKM 337
+TY ++ A+ T F+ +VE +
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEGI 575
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 4/324 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C + +A ELF MV G + + ++ L+ Y ++ + D+A L + + N +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-N 365
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P + +Y+ LI + V+ LL +M P+ VTYN LIDA + E
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
LV M+ + +P++ T N + + ++ + + + +G++P I +N+L++ Y
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K ++ + + M+ + I +YN +ID G + ++ L M P
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T L+ A+ +K S+ R I I D + +VD + + + L+
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
+ GC P+ TY ++ A +G
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDG 628
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 2/312 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K ++A LF+ + ++ S+ +L+ SG LL+ M + PDV
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDV 405
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI + K + +L M +G++PN VTYN ++D Y + +
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ EPD+ N + + + +D +++ + + P I ++N L+D G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ +++ M S ++TYNI++DAF + + LFR + E I P T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHA 584
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V K + L+ + + + L++A + F E +L M+
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 304 CKPDKVTYRTMV 315
PD +T+ ++
Sbjct: 645 RPPDAITFEIII 656
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F MV G + + ++ L++ Y ++ + D+A L + M++ + PD+ +Y+ LI
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLI 517
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
VQ LL +M G P+ +TYN L+DA+ + + F + ++L + + E
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF-DKAISLFRQIVEGIW 576
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + ++ E + G P++ T+ IL+++ K G F + +
Sbjct: 577 PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ M+ +T+ I+I + + + E L R E I V +
Sbjct: 637 LSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL----REEMIARGLVNI 683
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 143/357 (40%), Gaps = 44/357 (12%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F MV T F LL A R G + A SL ++ + P + T++ILI
Sbjct: 43 FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQ-SKGISPSIATFTILINCYF 101
Query: 75 K----AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
AFAF +LL+ + G +PN VT+NT+I+ + M + +L++
Sbjct: 102 HQSHTAFAF----SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN--------------------- 169
D +T + +GQI ++ + + +QP++
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 170 --------------TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
T+N L+D G +++++ ++ M + + T+NI+IDA +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G + + + + +M KP VT +L+ Y + + + + D +
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L+D Y + K E + + + + P +Y +++ +G +H K+ D
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 36/277 (12%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P T ++ L+ A R + ++ S+ P + T + + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+G QP++ TFN +++ + G K + + Y + TY +I+ +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G +K +L + M ++P+ V +L+ G + I I+LD V
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 276 FNCLVD---AYGRLK----------------------------C----FAEMKGVLEVMQ 300
+N L+D + GR + C E +GVL +M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+RG KPD VTY ++ Y + + A+E F +V++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ + A + + ++ GC N Q++T L++A + G F +A LL M++ D P
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN-DRPP 647
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
D T+ I+I L+ DK + L +M +G+
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 6/198 (3%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P NC R +D C+ + P + F+ LL + + GH+ +
Sbjct: 23 QPQNPHKNCRFR------NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAIS 76
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ +Q S +I T+ I+I+ + L + +P+ VT +++ +
Sbjct: 77 LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G K + + + D + L++ + +L+ M++ +P+ V
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Query: 310 TYRTMVRAYSTNGMKNHA 327
Y ++ +G + A
Sbjct: 197 MYSALIDGLCKDGFVSDA 214
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKA 76
M D + +++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K
Sbjct: 3 MRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKL 60
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
+ K ++ S + G P+ V YN I+ +G+AK+F E + +M P+ +
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASY 120
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
+ L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 121 STLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
++++ + I +++ ++ ++ +G++ + + ++ G + D++ ++TM+
Sbjct: 241 ANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 300
Query: 317 AYSTNGMKNHAKEF 330
AY G+ HAK
Sbjct: 301 AYERAGLVAHAKRL 314
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ ++ C
Sbjct: 91 VFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMK-CL 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 150 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q GI+P+ T++ ++ +GK
Sbjct: 210 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++S P +
Sbjct: 270 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKS----PDNIP 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + + K +A + V + M+
Sbjct: 326 RDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMR 385
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 386 GLGYFPDSNVIALVLNAY 403
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 163 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 221
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+ +
Sbjct: 222 VVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 281
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + +S P +IL AG
Sbjct: 282 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHIL----AGAG 337
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L + + V +
Sbjct: 338 RIEEATYV---------------FRRAIDA-GEVKDITVFERMIHLFSKYKKYANVVEVF 381
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I L +++AYG+L F + V MQ+
Sbjct: 382 DKMRGLGY------------FPDSNVIAL-------VLNAYGKLHEFDKANSVYMEMQEV 422
Query: 303 GC 304
GC
Sbjct: 423 GC 424
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M PD +T + + FG G D +K + + + ++ L++ K
Sbjct: 2 EMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ K ++ +++ ++ +V YN I+ FG+A ++ L MR + P+ +
Sbjct: 62 DYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYS 121
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y K + SV + +LD N ++D YG+L E + M++
Sbjct: 122 TLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181
Query: 303 GCKPDKVTYRTMVRAY 318
G +P+ V+Y T++R Y
Sbjct: 182 GIEPNVVSYNTLLRVY 197
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +KA+ LF M+ +G + ++ +L+ ++ DKA ++L+HM + PD TY
Sbjct: 215 EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK-GVMPDTRTY 273
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I+I+ ++ LL MS G++P+ VTY+ LI Y + AE M+
Sbjct: 274 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVR 333
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +P+ + L + G + + + GI FNIL+ +Y K G +K
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
M++ +V+Y+ VI + G ++ Y F M SE + P+ ++ SL+
Sbjct: 394 AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 453
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ +K+ + + N I D +F N ++D + E + +++ G KP
Sbjct: 454 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
D V+Y T++ Y G + + ++++D RPD
Sbjct: 514 DVVSYNTLIDGYCFVG------KMDESIKQLDRMVSIGLRPD 549
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + Q M D+G +T+++ ++ Y G ++A LL+ M + QP
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS-GLQP 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS+LI+ K + +++ M +G +PN+ Y+ L+ Y ++ L
Sbjct: 304 DVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 363
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + + N + A+ G +D + + + G++P + +++ ++ K
Sbjct: 364 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKT 423
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E M S I+++ +I G+ K++E L M + I P + +
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 483
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ + + + + D V +N L+D Y + E L+ M
Sbjct: 484 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G +PD TY +++ Y NG
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNG 564
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 37/311 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--DCQPDVNTYSILIK 71
+F+ M + G + S+ AL+ +A LL HM +C P+V +Y+ +I
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K DK L +M QG+ P+ VTYN+LID +A+ + L M + P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N +R + + GQ++ + +K +G+QP + T+++L+ Y K G + +V
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M + Y+I++ + G L + L LM + I + H
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI------------PFEHR 376
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
FN L+ AY + + M+Q G +PD V+Y
Sbjct: 377 A-----------------------FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 413
Query: 312 RTMVRAYSTNG 322
T++ G
Sbjct: 414 STVIHILCKTG 424
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 137/345 (39%), Gaps = 4/345 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + E A F MV EG N SFT+L+ G + K L M N
Sbjct: 419 ILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-GIH 477
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD + ++ + K + Q + G++P+ V+YNTLID Y E
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+S PD WT N L + +G+++ Y + ++ T NI+L +
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQ 597
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + M I TYN V+ + + +F +RS+ + T
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ A G+ ++ S+ + + D + ++ ++ ++ E + M+
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
+ GC D +VR G A + + K+DE +++
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTY---LTKIDEKNFSLE 759
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 142/337 (42%), Gaps = 12/337 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGR---SGLFDKAFSLLEHMKNTPDCQPDVNT 65
E A LF ++ + A+ +F ++L+ R S + +L + NT + VN
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTM-VRSGVNM 89
Query: 66 YSILIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELT 120
+ +I ++ F D A + G R VT N LI + M++
Sbjct: 90 MAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMV 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAGIQ--PSINTFNILLDS 177
+M PDV++ N ++ + +E G P++ ++N ++D
Sbjct: 150 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G +K + M +VTYN +ID +A + + + + M + + P
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T ++R Y G+ E+ +L+ + S + D V ++ L+ Y ++ AE + V +
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
M ++G KP+ Y ++ Y+T G ++ DL+
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C PDV Y+ +I K +
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTY++++ A +A+ + E L +M+++ PD WT N +
Sbjct: 241 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLI 300
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T N+L+ S K G ++ V + M +
Sbjct: 301 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN 360
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +Y I+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 361 PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMII 420
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 421 FNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 480
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 481 HGSLLKAKEL 490
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 43/366 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C + ++T ++ + + G +KA L + M + P PD+ T
Sbjct: 204 QADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIP---PDLVT 260
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
YS ++ + KA A K +A L M +G+ P+ TYN LI Y ++F EM
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320
Query: 119 --------LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQID 150
+TL ++ C+ PDV++ L + G +
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
M ++ GI P I TF++L+ +Y G +K + M+ + +VTY VI
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A R G + F M + + P L++ + G K ++ I N+ +
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD VFF+ +++ +L + + + ++ G PD V Y ++ Y G M+ +
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 330 FQDLVE 335
F +V
Sbjct: 561 FDAMVS 566
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 148/337 (43%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE AH+L + G + L+A R+ LF++A S
Sbjct: 48 RPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAAS---R 104
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R + + N L+ + AK
Sbjct: 105 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAK 164
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P +
Sbjct: 165 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPDV 223
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++D + K G K + + M + +VTY+ V+ A +A + + E R
Sbjct: 224 VAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQ 283
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++ + P T +L+ Y G+ ++ V + + I+ D V N L+ + YG+
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y+ M+ Y+T G
Sbjct: 344 IK---EARDVFDTMAMKGQNPDVFSYKIMLNGYATKG 377
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 134/303 (44%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G + +F+ L+ AY G+ DKA + M++ +PDV TY+ +I +
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYTTVIAA 442
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ Y+ LI + + + ++++++ D
Sbjct: 443 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLD 502
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G+I + ++ + G P +++L+D Y G EK V +
Sbjct: 503 IVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFD 562
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V Y +++ + + G + + LFR M + IKPS + ++ AG
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I ++ +N ++ + + +CF E + + ++ K D +T
Sbjct: 623 RTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLN 682
Query: 313 TMV 315
TM+
Sbjct: 683 TMI 685
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 150/373 (40%), Gaps = 43/373 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA + MV++G + ++ L+ Y +G + +A + + M+ P
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILP 326
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T ++L+ S K + + + M+ +G P+ +Y +++ Y +M
Sbjct: 327 DVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLF 386
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + PD++T + ++A+ N G +D + + + G++P + T+ ++ + +
Sbjct: 387 DLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI 446
Query: 182 GHFEKMSAVMEYMQ----------KYHYS----------------------------WTI 203
G KM ME KY Y I
Sbjct: 447 G---KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V ++ +I+ + G + + +F L + P V L+ Y GK EK V
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ ++ I + V + LV+ Y ++ E + M Q+G KP + Y ++ G
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 324 KNHAK-EFQDLVE 335
AK +F ++ E
Sbjct: 624 TVPAKVKFHEMTE 636
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 1/262 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N + D+ +S
Sbjct: 450 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN-GMRLDIVFFSS 508
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G P+ V Y+ L+D Y + M+S
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS +NI++D AG
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + TYNIV+ F + + +LF+ +R+ +K +TL +++
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688
Query: 249 GHAGKPEKLGSVLRFIDNSDIM 270
+ E+ + I S ++
Sbjct: 689 FQTRRVEEAKDLFASISRSGLV 710
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 1/232 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA EL +++ G + F+++++ + G A ++ + N PD YS+L
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQ-HPDAVVYSML 544
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ +K + M + GI PN V Y TL++ Y + E +ML +
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P N + +G+ + + + +GI + T+NI+L + K F++
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIF 664
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + ++ + I+T N +I + +++ + LF + + P VT+
Sbjct: 665 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +F AMV G + N + L++ Y + G D+ SL M +P Y+I
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPSTILYNI 613
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A + +M+ GI N TYN ++ + + + F E ++ + +
Sbjct: 614 IIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
+ D+ T+N + + +++ + + +G+ P + T
Sbjct: 674 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 143/300 (47%), Gaps = 1/300 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M+ G + +T + +L G++ + D+A L MK+ C D TY+ILI
Sbjct: 68 AMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSM-GCPADDYTYAILI 126
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+S + ++ L +M +G P+ Y +ID Y +A + L KML ++
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLA 186
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T+N + A +G+ + + +E+ + +G+ + +FN +LD GKAG
Sbjct: 187 PDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQF 246
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M+ M+ +T+N +I+ GRA + + + MRS + P T ++ A+
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG K + ++ + + V +N L+DA + + + + + M+++G PD +T
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 9/321 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ A+ D C + A+++AYGRS K + + + +P+ TY +I+S
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQEL-DKHGSKPNAYTYKCVIQSL 59
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+KA L M G+ P+T+ YN ++D G+A M E M S C D
Sbjct: 60 VKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADD 119
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+T +R+ G + + +++ + G PS + ++D Y KAG E V++
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + + T N +I A R G + +F M+ + + V+ +++ G AG
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG- 238
Query: 254 PEKLGSVLRFIDNSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K+G +F+D + I +++ FN L++ GR K +E VL+ M+ G PD T
Sbjct: 239 --KVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFT 296
Query: 311 YRTMVRAYSTNGMKNHAKEFQ 331
Y M+ A++ G N K F+
Sbjct: 297 YTCMIEAFAKAG--NMGKAFE 315
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+CK+ E+A LF M + GC + ++T ++ Y ++G + A +L+ M + + P
Sbjct: 129 LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLD-KNLAP 187
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T + LI + + + + M G+ NTV++N ++D G+A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +P+ T N + G + K ++ +SAG+ P + T+ +++++ KA
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ K + M+K S +VTYN++IDA +AG + ++ M+ + I P +T
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITA 367
Query: 242 CSLVRAYG 249
L + G
Sbjct: 368 TVLQQLAG 375
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ K +A+++ Q M G + ++T ++ A+ ++G KAF + M+ C
Sbjct: 269 LGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA-GCSA 327
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+V TY++LI + +KA + + + DM +GI P+ +T L G+ K+
Sbjct: 328 NVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKL 379
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 36/355 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L Q MV++GC +T+++T L+ A G+ DKA +L+ M T C P+V+TY+I
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA-TKACVPNVHTYTI 340
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEME--- 118
LI + ++ + M G+ P +T+N LI+ Y + ++ + ME
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400
Query: 119 -------------------------LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
L L +++ PD T N + F GQ++
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ SAG++P TF L+D K G E+ + ++ M K S VT+ +ID
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G K + +LF M R + T + A G K + ++L + ++
Sbjct: 521 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 580
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V L++ + R A +LE M+Q GC P+ TY ++ NG A+
Sbjct: 581 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 4/330 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C++ + +A +F+ M +E C N+ +++ L+ +G ++AF L + M
Sbjct: 236 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-K 294
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
CQP TY++LIK+ DK +L +M+T+ PN TY LID R E
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KML P + T N + + G + + + + +P+I T+N L++
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K ++ + VTYNI++D F + G L +F M S ++P
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ G+ E+ +L + I LD V F L+D + ++ ++ + E
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + C T+ + A + N A
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEA 564
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 5/335 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A E+F V G +T T+L+ A R +AF + E M +C+P+ TYSI
Sbjct: 211 QAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSI 270
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +A ++ L +M +G +P+T TY LI A M + L +M ++
Sbjct: 271 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T + G+I+ + K G+ P I TFN L++ Y K G
Sbjct: 331 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 390
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K + I TYN +++ R + L R + + P VT LV +
Sbjct: 391 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 450
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ ++ ++++ + D F L+D +L + G+L M ++G D+
Sbjct: 451 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 510
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET-CL 342
VT+ ++ + G AK+ L E M E CL
Sbjct: 511 VTFTALIDGHCKIG---KAKDVCFLFENMVENRCL 542
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ + KA L + +VD G + ++ L+ + + G + AF++ M N+
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAG 470
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD T++ LI K ++ +L M +GI + VT+ LID + + ++
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M+ C T NC L A G +++ K G+ PS+ T IL++ +
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG ++E M++ S + TY I+I+ G +++ E + M S + P+
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 650
Query: 239 VTLCSLVRAYGHAGKPEK 256
T LV+A+ AG+ ++
Sbjct: 651 FTYAVLVKAHVKAGRLDR 668
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 139/345 (40%), Gaps = 36/345 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A+ +F+ M+ G +F AL++ Y + G AF LL M+ +C+P++ TY+
Sbjct: 352 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG-NCKPNIRTYNE 410
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ + K LL + G+ P+ VTYN L+D + + M S
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ----------------------- 165
EPD +T + G+++ GI
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530
Query: 166 ------------PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ +TFN LD+ GK + +A++ M KY ++VT+ I+I+
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
RAG+ + M+ P+ T ++ + G+ E+ ++L + + + +
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 650
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ LV A+ + ++ M + GC+P+ Y ++ +
Sbjct: 651 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 152/310 (49%), Gaps = 2/310 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A +F+ M G + +S ++ YG +G +A L ++++ + D+ Y++
Sbjct: 363 DGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVK-RLDIFAYNV 421
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I ++ + + M + P+ TY++++ + + A+ E ++ + D
Sbjct: 422 MINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSD 481
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E D NC L ++ M K +++ G P TFN+++D YGKAG E+
Sbjct: 482 VELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAH 541
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ Q++ S ++++ ++ A+ + D ME M++ S S++ AY
Sbjct: 542 KALKLAQQFG-SADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAY 600
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AG+ EK+ VL ++NS + +D +N L++ YG+ AEM+ + MQ+ G PD+
Sbjct: 601 GKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDR 660
Query: 309 VTYRTMVRAY 318
TY T++R Y
Sbjct: 661 WTYNTIIRTY 670
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C PE A ++++ M ++ + ++ ++L + L +A + ++N+ D + D
Sbjct: 428 RCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNS-DVELDE 486
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ ++ +C K +++ L +M G P +T+N +ID YG+A M E +K
Sbjct: 487 VMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGM-PERAHKALK 545
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + D + + + A+ ME + Q+AG S+ +N +LD+YGKAG
Sbjct: 546 LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQ 605
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
EK+S V+ M+ + +YNI+I+ +G+ + +ME LFR M+ E + P T +
Sbjct: 606 MEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNT 665
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++R YG A P++ + + ++ I D V + LV + R
Sbjct: 666 IIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFER 707
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 150/328 (45%), Gaps = 1/328 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + E+A + + + G + ++++AYG++ L+DKA L+E M+ D PD
Sbjct: 147 GQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREE-DLVPD 205
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS +I +C + + + ++M I+P + +NTLI YG+AK + +
Sbjct: 206 SITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVIT 265
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C+PD T++ +RA+ +G I + + + AG ++ LL Y K
Sbjct: 266 EMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCN 325
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + M+K + +I F A + +F+ M+ + PS + C
Sbjct: 326 LPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSC 385
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ YG G ++ + + +S LD +N +++ Y R V ++M++
Sbjct: 386 TMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEED 445
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD TY +M+R + A+E
Sbjct: 446 HLLPDAYTYHSMLRMCQKCNLPAQAEEI 473
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 4/339 (1%)
Query: 1 MLGKCKQPEKAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
M+G C + K E F M + +F L+S YG++ + ++ MK
Sbjct: 212 MIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMKKY- 270
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C+PD T +++ +A V +L+ + G T +Y TL+ Y + + E
Sbjct: 271 GCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEA 330
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M P + + F ++ D + +++ Q AG+ PS+ + ++
Sbjct: 331 LRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYV 390
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
YG G ++ + ++ I YN++I+ + R + +++LM + + P
Sbjct: 391 YGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPD 450
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T S++R P + + + NSD+ LD V NC+++ + EM + +
Sbjct: 451 AYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQ 510
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
M G P +T+ M+ Y GM A + L ++
Sbjct: 511 EMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQ 549
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK PE+AH+ + + + A+ SF+ L+ AY + F + L M+N
Sbjct: 530 LYGKAGMPERAHKALK-LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNA-GYG 587
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y+ ++ + KA +KV +L+ M G+R + +YN LI+ YG+ M AEME
Sbjct: 588 SSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETL 647
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M E PD WT N +R +G + D ++ Q AGI P T+ IL+ ++ +
Sbjct: 648 FRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFER 707
Query: 181 AGHFEK 186
AG+ ++
Sbjct: 708 AGNIDE 713
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 2/213 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ H+LFQ M+D G +F ++ YG++G+ ++A L+ + D ++S
Sbjct: 503 EEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSA--DKISFST 560
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + K F ++A L +M G + YN+++DAYG+A ++ L +M +
Sbjct: 561 LVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSG 620
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D+ + N + +G + I ME + Q G+ P T+N ++ +YG A + ++
Sbjct: 621 MRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAV 680
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ MQ S VTY I++ F RAG++ +
Sbjct: 681 YWFKAMQDAGISPDRVTYMILVSTFERAGNIDE 713
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 7/344 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC P++A +F AM G +L+ + + +FD A S+ + M+ P +
Sbjct: 323 KCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQ-VAGVTPSL 381
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ +I + + L + + R + YN +I+ Y R M E + + K
Sbjct: 382 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDM-PEGAIKVYK 440
Query: 124 MLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ ED PD +T + LR E+ Y + +++ ++ N +L++ K
Sbjct: 441 LMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFL 500
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+M + + M Y +T+N++ID +G+AG ++ +L + + ++
Sbjct: 501 PLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQ-QFGSADKISFS 559
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV AY + + L + N+ +N ++DAYG+ ++ VL M+
Sbjct: 560 TLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENS 619
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
G + D +Y ++ Y N M E + L M E + R
Sbjct: 620 GMRMDLASYNILINTYGKNYM---IAEMETLFRTMQEEGVVPDR 660
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
Q+ G + + D+YG+ G E+ +M+ +++ S +V YN +I A+G+A
Sbjct: 127 IQAIGTLQEKRLISNVADTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACL 186
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
+ L MR E + P +T ++ A G GK ++ S + +I + FN
Sbjct: 187 YDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNT 246
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L+ YG+ K + V+ M++ GCKPD T VRAY G+ E +L+
Sbjct: 247 LISPYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLL 302
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+G G+I+ E+ + + +G+ + +N ++ +YGKA ++K + ++E M++
Sbjct: 146 YGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPD 205
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+TY+ +I A GR G LK+ F M+ IKP+ +L+ YG A E + V+
Sbjct: 206 SITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVIT 265
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D + V AY R ++ +L +++ G + +Y T++ Y
Sbjct: 266 EMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVY 321
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M +A+ F ++ + + D A +L + M+ T +
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 292
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS LI SCL ++ + LLSDM + I PN VT+N LIDA+ + F E E
Sbjct: 293 PNVVTYSSLI-SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+ +PD++T N + F ++D ++ +E S P + T+N L+ +
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ E + + M VTY +I GD + +F+ M S+ + P +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + GK EK V ++ S+I LD + +++ + + + +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ VTY TM+ + K +E L++KM E
Sbjct: 532 SLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKE 568
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INP 328
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++ LI + +K F + + L DM + I P+ TYN+L++ + + +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+DC PDV T N ++ F S +++ + + + G+ T+ L+
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V + M I+TY+I++D G L++ +F M+ IK
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ AGK + + + + + V +N ++ + E +L+ M++
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ TY T++RA+ +G K + E
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F LLSA + FD SL E M+ + + TY+I
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL-EIVHGLYTYNI 125
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ALL M G P+ VT ++L++ Y K ++ + +M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T + + ++ G QP++ T+ ++++ K G +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+ +V +N +ID+ + + LF+ M ++ I+P+ VT SL+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ +L + I + V FN L+DA+ + F E + + + M +R PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY ++V + + + AK+ F+ +V K
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A +L M+++ + N +F AL+ A+ + G F +A L + M K + D PD+ TY+ L
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID--PDIFTYNSL 371
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ DK + + M ++ P+ VTYNTLI + ++K + +M
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T ++ + G D +K +++ S G+ P I T++ILLD G EK
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 190 VMEYMQK-------YHYS---------------W-------------TIVTYNIVIDAFG 214
V +YMQK Y Y+ W +VTYN +I
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
L++ L + M+ + P+ T +L+RA+ G ++R
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 37/282 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ D + ++ +L++ + DKA + E M + DC PDV TY+ L
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV-SKDCFPDVVTYNTL 406
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K+ + L +MS +G+ +TVTY TLI + +M+S+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA--------------------------- 162
PD+ T + L N+G+++ + ++ Q +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 163 --------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
G++P++ T+N ++ ++ A+++ M++ TYN +I A
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
R GD L R MRS R T+ LV H G+ +K
Sbjct: 587 RDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDK 627
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 1/272 (0%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++++ L D L M P+ V +N L+ A + K F + KM
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ ++T N + F QI K G +PSI T + LL+ Y
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
A+++ M + Y +T+ +I + L M +P+ VT +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G + ++L ++ + I D V FN ++D+ + + + + + M+ +G +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
P+ VTY +++ + G + A + D++EK
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 36/355 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L Q MV++GC +T+++T L+ A G+ DKA +L+ M T C P+V+TY+I
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA-TKACVPNVHTYTI 274
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEME--- 118
LI + ++ + M G+ P +T+N LI+ Y + ++ + ME
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334
Query: 119 -------------------------LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
L L +++ PD T N + F GQ++
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ SAG++P TF L+D K G E+ + ++ M K S VT+ +ID
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G K + +LF M R + T + A G K + ++L + ++
Sbjct: 455 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V L++ + R A +LE M+Q GC P+ TY ++ NG A+
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 4/330 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C++ + +A +F+ M +E C N+ +++ L+ +G ++AF L + M
Sbjct: 170 VLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-K 228
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
CQP TY++LIK+ DK +L +M+T+ PN TY LID R E
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KML P + T N + + G + + + + +P+I T+N L++
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K ++ + VTYNI++D F + G L +F M S ++P
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ G+ E+ +L + I LD V F L+D + ++ ++ + E
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + C T+ + A + N A
Sbjct: 469 NMVENRCLTTAHTFNCFLDALGKDYKLNEA 498
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 148/335 (44%), Gaps = 5/335 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A E+F V G +T T+L+ A R +AF + E M C+P+ TYSI
Sbjct: 145 QAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSI 204
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +A ++ L +M +G +P+T TY LI A M + L +M ++
Sbjct: 205 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T + G+I+ + K G+ P I TFN L++ Y K G
Sbjct: 265 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 324
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K + I TYN +++ R + L R + + P VT LV +
Sbjct: 325 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 384
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ ++ ++++ + D F L+D +L + G+L M ++G D+
Sbjct: 385 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 444
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET-CL 342
VT+ ++ + G AK+ L E M E CL
Sbjct: 445 VTFTALIDGHCKIG---KAKDVCFLFENMVENRCL 476
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ + KA L + +VD G + ++ L+ + + G + AF++ M N+
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAG 404
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD T++ LI K ++ +L M +GI + VT+ LID + + ++
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M+ C T NC L A G +++ K G+ PS+ T IL++ +
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 524
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG ++E M++ S + TY I+I+ G +++ E + M S + P+
Sbjct: 525 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 584
Query: 239 VTLCSLVRAYGHAGKPEK 256
T LV+A+ AG+ ++
Sbjct: 585 FTYAVLVKAHVKAGRLDR 602
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 139/345 (40%), Gaps = 36/345 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A+ +F+ M+ G +F AL++ Y + G AF LL M+ +C+P++ TY+
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK-GNCKPNIRTYNE 344
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ + K LL + G+ P+ VTYN L+D + + M S
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ----------------------- 165
EPD +T + G+++ GI
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464
Query: 166 ------------PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ +TFN LD+ GK + +A++ M KY ++VT+ I+I+
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 524
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
RAG+ + M+ P+ T ++ + G+ E+ ++L + + + +
Sbjct: 525 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 584
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ LV A+ + ++ M + GC+P+ Y ++ +
Sbjct: 585 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 7/320 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A +LF+ M +G S+T+L+ + G +++A L M N QP
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ-GVQP 310
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+++LI K + + LL M +GI PN +TYN+LI+ +
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY--- 178
V M S+ CEPDV + + + +++ K Y G +P + T+ LL
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GK G +K+ VM+ Y + Y I ++ + G L + LF ++S IK
Sbjct: 431 GKVGDAKKLFGVMKV---YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDI 487
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ AGK E + + ++ D V +N ++ + R + + +
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
M++ GC PDK+TY T++R +
Sbjct: 548 MEKNGCTPDKITYATLIRGF 567
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 118/300 (39%), Gaps = 36/300 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF MV++G N +F L+ + G +A LLE M P++ TY+
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR-GIVPNLLTYNS 352
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ + + L M ++G P+ + Y LI+ Y + E ML
Sbjct: 353 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 412
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEK---------------------------------- 154
PDV T L G++ +K
Sbjct: 413 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 472
Query: 155 -CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ K +S I+ I FN L+D KAG E + E + + +VTYNI+I F
Sbjct: 473 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 532
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + + LF+ M P +T +L+R + + K EK+ +L + D+ LD
Sbjct: 533 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 134/323 (41%), Gaps = 34/323 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F M+ SFT LLS + + + F L M+ PD T +IL
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR-LSGISPDCCTLNIL 137
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + A+++ + +G P+ VTY TLI ++ L +M C
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS--YGKAGHFEKM 187
P+ T ++ +G I K +++ +L DS YG
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQE--------------MLNDSSLYG-------- 235
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ +++Y+I+IDA + + LF M+ + + P+ ++ SL+
Sbjct: 236 ---------INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ GK E+ + + N + + V FN L+D + E K +LEVM QRG P+
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
+TY +++ + G N A+E
Sbjct: 347 LLTYNSLIEGFCLVGDLNSAREL 369
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 125/326 (38%), Gaps = 40/326 (12%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-----DCQPDVN 64
KA LF M GC N ++ L+ R+G A L + M N + +P V
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+YSI+I + K D+ + L +M QG+ P ++Y +LI
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI------------------- 284
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
F G+ + ++ + + + G+QP++ TFN+L+D K G
Sbjct: 285 ----------------HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 328
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++E M + ++TYN +I+ F GDL LF M S+ +P + L
Sbjct: 329 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVL 388
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y K E+ + + D + L+ + + K + VM+ G
Sbjct: 389 INGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI 448
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
D Y + NG A E
Sbjct: 449 PGDLYIYGIFLNGLCKNGCLFEAMEL 474
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
Y + + +GI P T NILL+ + AVM + + Y IVTY +I
Sbjct: 119 YNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCM 178
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
+ + LF M+ P+ +T +L++ G + + + N + F
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238
Query: 276 ------FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
++ ++DA + + E + + E M+ +G P ++Y +++ + G AK
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298
Query: 330 -FQDLVEK 336
F ++V +
Sbjct: 299 LFNEMVNQ 306
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 58
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN +I+ +G+AK+F E + +M + P+ + + L + +
Sbjct: 59 RLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENK 118
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 119 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 178
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + +
Sbjct: 179 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 238
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY G+ HA
Sbjct: 239 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHA 298
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 299 KRL----------LHELKRPD 309
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 78 VFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 136
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 137 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 196
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 197 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 256
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 257 VGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 312
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 313 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 372
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 373 GLGYFPDSDVIAIVLNAY 390
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 150 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 208
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 209 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 268
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 269 KLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 324
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 325 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 368
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 369 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 409
Query: 303 GC 304
GC
Sbjct: 410 GC 411
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M +A+ F ++ + + D A +L + M+ T +
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME-TKGIR 254
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS LI SCL ++ + LLSDM + I PN VT+N LIDA+ + F E E
Sbjct: 255 PNVVTYSSLI-SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 313
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+ +PD++T N + F ++D ++ +E S P + T+N L+ +
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+ E + + M VTY +I GD + +F+ M S+ + P +
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + GK EK V ++ S+I LD + +++ + + + +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ VTY TM+ + K +E L++KM E
Sbjct: 494 SLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKE 530
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 232 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INP 290
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ T++ LI + +K F + + L DM + I P+ TYN+L++ + + +
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+DC PDV T N ++ F S +++ + + + G+ T+ L+
Sbjct: 351 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 410
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V + M I+TY+I++D G L++ +F M+ IK
Sbjct: 411 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 470
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ AGK + + + + + V +N ++ + E +L+ M++
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ TY T++RA+ +G K + E
Sbjct: 531 DGPLPNSGTYNTLIRAHLRDGDKAASAEL 559
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 1/331 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ A L MV+ G +T +FT L+ +A +L++ M CQP++ T
Sbjct: 131 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVT 189
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y +++ K D LL+ M I + V +NT+ID+ + + + +M
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ P+V T + + + G+ + I P++ TFN L+D++ K G F
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + M K I TYN +++ F L + + +F M S+ P VT +L+
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + + + E + R + + ++ DTV + L+ + V + M G
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
PD +TY ++ NG A E D ++K
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F LLSA + FD SL E M+ + + TY+I
Sbjct: 29 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL-EIVHGLYTYNI 87
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ALL M G P+ VT ++L++ Y K ++ + +M+
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T + + ++ G QP++ T+ ++++ K G +
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+ +V +N +ID+ + + LF+ M ++ I+P+ VT SL+
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ +L + I + V FN L+DA+ + F E + + + M +R PD
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY ++V + + + AK+ F+ +V K
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSK 356
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A +L M+++ + N +F AL+ A+ + G F +A L + M K + D PD+ TY+ L
Sbjct: 276 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID--PDIFTYNSL 333
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ DK + + M ++ P+ VTYNTLI + ++K + +M
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T ++ + G D +K +++ S G+ P I T++ILLD G EK
Sbjct: 394 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 453
Query: 190 VMEYMQK-------YHYS---------------W-------------TIVTYNIVIDAFG 214
V +YMQK Y Y+ W +VTYN +I
Sbjct: 454 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 513
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
L++ L + M+ + P+ T +L+RA+ G ++R
Sbjct: 514 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 561
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 37/282 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ D + ++ +L++ + DKA + E M + DC PDV TY+ L
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV-SKDCFPDVVTYNTL 368
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K+ + L +MS +G+ +TVTY TLI + +M+S+
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA--------------------------- 162
PD+ T + L N+G+++ + ++ Q +
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488
Query: 163 --------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
G++P++ T+N ++ ++ A+++ M++ TYN +I A
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
R GD L R MRS R T+ LV H G+ +K
Sbjct: 549 RDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDK 589
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 1/272 (0%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++++ L D L M P+ V +N L+ A + K F + KM
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ ++T N + F QI K G +PSI T + LL+ Y
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
A+++ M + Y +T+ +I + L M +P+ VT +V
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G + ++L ++ + I D V FN ++D+ + + + + + M+ +G +
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
P+ VTY +++ + G + A + D++EK
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 144/342 (42%), Gaps = 39/342 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---- 57
L +P+ LF M + G +AN FT L+ + R G D A SLL+ MK+
Sbjct: 213 LSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTAD 272
Query: 58 --------DC----------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
DC PD TY+ LI KA D+ L
Sbjct: 273 LVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE 332
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
++ P YNT+I YG A F E L + + C P V NC L G G
Sbjct: 333 ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 392
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+++ + +++ + P++ T+NIL+D KAG E V + M++ I+T N
Sbjct: 393 KVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVN 451
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+ID +A L + +F + + P T CSL+ G G+ + S+ + +S
Sbjct: 452 IMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKG--VLEVMQQRGCKPD 307
D + + V + L+ + KC + G + + M RGC PD
Sbjct: 512 DQIPNVVVYTSLIQNF--FKCGRKEDGHKIYKEMVHRGCSPD 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 36/329 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC + E H++++ MV GC + + + ++G +K +L E +K PDV
Sbjct: 529 KCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIK-AQGLVPDV 587
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YSILI +KA + L +M QG+ + + YNT+ID + ++ + L +
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ +P V T + ++D +E+ +S G+ ++ ++ L+D +GK G
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++E + + + T+N ++DA +A ++ + + F+ M++ + P+ +T
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTY-- 765
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
IM++ + C++ + + F + MQ++G
Sbjct: 766 ------------------------SIMINGL---CMIRKFNKAFVF------WQEMQKQG 792
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
KP+ +TY TM+ + G A+ D
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFD 821
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A +F + + C ++++F +L+ GR G D A+SL E M ++ D P
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS-DQIP 515
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V Y+ LI++ K + + +M +G P+ + N+ +D +A +
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ ++ PDV + + + +G K + + + G+ + +N ++D + K+
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K ++E M+ T+VTY V+D + L + LF +S + + V
Sbjct: 636 GKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ +G G+ ++ +L + + ++ +NCL+DA + + E + + M+
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKN 755
Query: 302 RGCKPDKVTYRTMVRA 317
C P+ +TY M+
Sbjct: 756 LKCSPNAMTYSIMING 771
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+ ++LF M ++G + ++ ++ + +SG DKA+ LLE MK T QP V TY +
Sbjct: 605 ETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK-TKGLQPTVVTYGSV 663
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ K D+ L + + G+ N V Y++LID +G+ E L L +++ +
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ +T NC L A + +ID + C++ ++ P+ T++I+++ F K
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ MQK +TY +I +AG++ + LF ++ P +++
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843
Query: 250 HAGK 253
A K
Sbjct: 844 SANK 847
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 143/313 (45%), Gaps = 2/313 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + ++A+ L + +GC + ++ +L+ GR G ++A + + M+ D P+
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ--DAAPN 411
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ILI KA + + M G+ PN +T N +ID +A+ E +
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + C PD T + G G++D YEK + P++ + L+ ++ K G
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + + M S ++ N +D +AG++++ LF ++++ + P +
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYS 591
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AG + + + + LD + +N ++D + + + +LE M+ +
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK 651
Query: 303 GCKPDKVTYRTMV 315
G +P VTY ++V
Sbjct: 652 GLQPTVVTYGSVV 664
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + E A ++ M + G N + ++ ++ D+A S+ + + C
Sbjct: 421 MLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV-CS 479
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+ LI + D +L M PN V Y +LI + + +
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PD+ +N + +G+++ +E+ ++ G+ P + +++IL+ K
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M++ ++ YN VID F ++G + + L M+++ ++P+ VT
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+V + ++ + + + L+ V ++ L+D +G++ E +LE +
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719
Query: 301 QRGCKPDKVTYRTMVRA 317
Q+G P+ T+ ++ A
Sbjct: 720 QKGLTPNSYTWNCLLDA 736
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 117/286 (40%), Gaps = 3/286 (1%)
Query: 47 FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID 106
F +E C P+V Y+ + + D ++ +L +MS G + L+
Sbjct: 120 FRWVERKTQQAHC-PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVA 176
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
++ ++ E + M P + A + + D M + + Q G +
Sbjct: 177 SFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEA 236
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+++ F L+ + + G + ++++ M+ ++ +V YN+ ID FG+ G + F
Sbjct: 237 NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFF 296
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M+++ + P VT +L+ A + ++ + +D + + +N ++ YG
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
F E +LE +++GC P + Y ++ G A D
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHD 402
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++A+ + + ++ +G N+ ++ LL A ++ D+A ++MKN C P
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK-CSP 760
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSI+I F+K +M QG++PN +TY T+I +A E
Sbjct: 761 NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLF 820
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ + PD N + ++ + +E+ + G + + T +LLD+ KA
Sbjct: 821 DRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKA 880
Query: 182 GHFEK---MSAVMEYMQKYHYS 200
E+ + AV+ M K ++
Sbjct: 881 DCLEQAAIVGAVLREMAKSQHA 902
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 36/355 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L Q MV++GC +T+++T L+ A G+ DKA +L+ M T C P+V+TY+I
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA-TKACVPNVHTYTI 317
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEME--- 118
LI + ++ + M G+ P +T+N LI+ Y + ++ + ME
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377
Query: 119 -------------------------LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
L L +++ PD T N + F GQ++
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ SAG++P TF L+D K G E+ + ++ M K S VT+ +ID
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G K + +LF M R + T + A G K + ++L + ++
Sbjct: 498 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V L++ + R A +LE M+Q GC P+ TY ++ NG A+
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 4/330 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C++ + +A +F+ M +E C N+ +++ L+ +G ++AF L + M
Sbjct: 213 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-K 271
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
CQP TY++LIK+ DK +L +M+T+ PN TY LID R E
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KML P + T N + + G + + + + +P+I T+N L++
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K ++ + VTYNI++D F + G L +F M S ++P
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ G+ E+ +L + I LD V F L+D + ++ ++ + E
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + C T+ + A + N A
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEA 541
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 5/335 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A E+F V G +T T+L+ A R +AF + E M +C+P+ TYSI
Sbjct: 188 QAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSI 247
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +A ++ L +M +G +P+T TY LI A M + L +M ++
Sbjct: 248 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T + G+I+ + K G+ P I TFN L++ Y K G
Sbjct: 308 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 367
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K + I TYN +++ R + L R + + P VT LV +
Sbjct: 368 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 427
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ ++ ++++ + D F L+D +L + G+L M ++G D+
Sbjct: 428 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 487
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET-CL 342
VT+ ++ + G AK+ L E M E CL
Sbjct: 488 VTFTALIDGHCKIG---KAKDVCFLFENMVENRCL 519
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ + KA L + +VD G + ++ L+ + + G + AF++ M N+
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAG 447
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD T++ LI K ++ +L M +GI + VT+ LID + + ++
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M+ C T NC L A G +++ K G+ PS+ T IL++ +
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 567
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG ++E M++ S + TY I+I+ G +++ E + M S + P+
Sbjct: 568 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 627
Query: 239 VTLCSLVRAYGHAGKPEK 256
T LV+A+ AG+ ++
Sbjct: 628 FTYAVLVKAHVKAGRLDR 645
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 139/345 (40%), Gaps = 36/345 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A+ +F+ M+ G +F AL++ Y + G AF LL M+ +C+P++ TY+
Sbjct: 329 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK-GNCKPNIRTYNE 387
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ + K LL + G+ P+ VTYN L+D + + M S
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ----------------------- 165
EPD +T + G+++ GI
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507
Query: 166 ------------PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ +TFN LD+ GK + +A++ M KY ++VT+ I+I+
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 567
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
RAG+ + M+ P+ T ++ + G+ E+ ++L + + + +
Sbjct: 568 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 627
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ LV A+ + ++ M + GC+P+ Y ++ +
Sbjct: 628 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 3/308 (0%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ + R D+A L M+ C+PD TY LI + +A +
Sbjct: 141 ARNDIYNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L+ DM I P+ TYN LI+A G + + + KM PD+ T N L A+
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM--QKYHYSWT 202
+ Q +E + A ++P TFNI++ K G + V M ++
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPD 319
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VT+ ++ + G+++ +F M +E +KP+ V+ +L+ AY G E SV
Sbjct: 320 VVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFG 379
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + I+ D V + L+++YGR + + K V +M++ KP+ VTY ++ AY +NG
Sbjct: 380 DIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 323 MKNHAKEF 330
A E
Sbjct: 440 FLAEAVEI 447
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 7/320 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M C + +++ AL++A+GR+G + A +L++ M P +TY+
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNN 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +C + + + + M+ G+ P+ VT+N ++ AY + +++ M
Sbjct: 219 LINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 129 CEPDVWTMNCT---LRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
PD T N L G S Q +D +K A +P + TF ++ Y G
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDK--RAECRPDVVTFTSIMHLYSVRGEI 336
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E AV E M IV+YN ++ A+ G + +F ++ I P V+ SL
Sbjct: 337 ENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSL 396
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +YG + +P K V + + V +N L+DAYG AE + M+Q G
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGT 456
Query: 305 KPDKVTYRTMVRAYSTNGMK 324
KP+ V+ T++ A S + K
Sbjct: 457 KPNVVSVCTLLAACSRSKKK 476
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 157/322 (48%), Gaps = 3/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K Q +A ++F +M D+ C + +FT+++ Y G + ++ E M
Sbjct: 293 LSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAML-AEGL 351
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ L+ + + ++ D+ GI P+ V+Y +L+++YGR++ + +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKE 411
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E +P+V T N + A+G++G + + + + + G +P++ + LL +
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACS 471
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++ + V+ Q + YN I ++ A +L++ L++ MR +++K V
Sbjct: 472 RSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSV 531
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K + S L+ +++ I L ++ ++ AY + E + + M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ GCKPD + Y +M+ AY+ +
Sbjct: 592 KMAGCKPDVIAYTSMLHAYNAS 613
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +F+AM+ EG N S+ AL+ AY G+ + A S+ +K PDV +Y+
Sbjct: 337 ENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRN-GIVPDVVSYTS 395
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ S ++ K + + M + +PN VTYN LIDAYG AE +M +
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+V ++ L A S + +E QS GI + +N + SY A EK
Sbjct: 456 TKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ + M+K VT+ I+I R + + M I + S++ AY
Sbjct: 516 ALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + S+ + + D + + ++ AY + + + + M+ G +PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ ++RA++ G ++ DL+ + +
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 146/342 (42%), Gaps = 14/342 (4%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+L C + +K + A G + NT ++ + + +Y + +KA +L + M+
Sbjct: 466 LLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKK- 524
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+ D T++ILI + + + + L +M I Y++++ AY + E
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E +M C+PDV L A+ S + + + + ++ GI+P + L+ +
Sbjct: 585 ESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + +M+ M++ +T + + A + K+ L ++M S
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKG 294
++ +G +GK E + + I S + ++ + L++ A G + + E
Sbjct: 705 IGLTNQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAILLEHLLAVGNWRKYIE--- 761
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
VLE M G +P YR ++ + G ++ EF+ L+ +
Sbjct: 762 VLEWMSDAGIQPSNQMYRDII----SFGERSAGIEFEPLIRQ 799
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
F +L+ + G E V ++M+ + +Y YN++I R + Q LF
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFE 168
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M+ KP T +L+ A+G AG+ +++ + + I +N L++A G
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ + V + M G PD VT+ ++ AY + + A + +L++ A RPD
Sbjct: 229 WRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG------AKVRPD 282
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + +S++ L+A + G + +A LL M+ + + DV YS I +C + +
Sbjct: 5 GIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGGRWQE 64
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
A+LSDM G+RPN ++ N I A+G A + L M PD + N +
Sbjct: 65 AVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAISYNTAIS 124
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFN--ILLDSYGKAGHFEKMSAVMEYMQKYHY 199
A G +GQ + ++ + GI+P++ T+N I + G G + + A++++M
Sbjct: 125 ALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAGV 184
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +TYN +I A G+ G KQ + + M+ + + + + + A G AG+ E
Sbjct: 185 TPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACGEAGQWEYSVG 244
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+L + I D V + V A + +L+ M G +PD + +++ A
Sbjct: 245 LLAEAKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAAFTSLIAALG 304
Query: 320 TNGMKNHAKEFQDLVEKM 337
+G A E + + KM
Sbjct: 305 HDGQWTQAVEILESMPKM 322
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDC 59
LG Q E+A EL M G + ++ + ++A R G + +A +L++HM +
Sbjct: 126 LGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHM-SLAGV 184
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD TY+ LI +C K + + ++L M QG+ + + Y+ I A G A +
Sbjct: 185 TPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACGEAGQWEYSVG 244
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + S PD+ + A ++ Q D ++ SAGI+P F L+ + G
Sbjct: 245 LLAEAKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAAFTSLIAALG 304
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G + + ++E M K + YN +I ++ A
Sbjct: 305 HDGQWTQAVEILESMPKMGAPRNAMVYNALITSWANA 341
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 111/283 (39%), Gaps = 38/283 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q + A + + M G + S+ +SA G +G ++A L+ M +P
Sbjct: 92 GEAGQWQHALSILRGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEMSRL-GIEPT 150
Query: 63 VNTYSILIKSCLKAFA--FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY+ I + + + + AL+ MS G+ P+++TYN+LI A G+ + +
Sbjct: 151 VVTYNSAIAAIARGGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSV 210
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + D+ + + A G +GQ + + +S GI P
Sbjct: 211 LKGMKKQGLSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPD------------- 257
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+V Y + A A + +L + M S I+P
Sbjct: 258 ----------------------LVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAA 295
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
SL+ A GH G+ + +L + + + +N L+ ++
Sbjct: 296 FTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNALITSW 338
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 36/255 (14%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP--DVWTMNCTLRAFGNS 146
M GIRP+ +Y+ + A + + E L L++ + ED E DV + + A N
Sbjct: 1 MPGLGIRPSVESYSIGLTACAKGGRWQEA-LVLLREMEEDDEIKLDVVAYSAAITACANG 59
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + G++P++ + N + ++G+AG ++ +++ M K S ++Y
Sbjct: 60 GRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAISY 119
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N I A G AG +Q + L M I+P+ VT S + A G +
Sbjct: 120 NTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQ----------- 168
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + +++ M G PD +TY +++ A G
Sbjct: 169 ----------------------WRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQ 206
Query: 327 AKEFQDLVEKMDETC 341
A ++K +C
Sbjct: 207 ALSVLKGMKKQGLSC 221
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 1/330 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + EL MV GC N +F L++ R+GLF++ L M C PD+
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH-GCTPDLRM 285
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I K + +LS M + G++PN V YNT++ A+ + E E L +M
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EDC D T N + F +G +D + + E+ G P + T+ +++ + K G +
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ M ++Y IV+ RA + L M + P+ VT +L+
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G E+ +L+ + + D + ++ ++D G+ E +L VM +G
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
P+ + Y +M A S G + + D ++
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQ 555
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 143/316 (45%), Gaps = 1/316 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
Q + +GC ++ + ++SA G D+ LL + + C+PD+ +Y+ ++K
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF-GCEPDIVSYNAVLKGLC 224
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
A +D V+ L+ +M G PN T+NTLI R +F ++ L +M C PD+
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
+ G + + S G++P++ +N +L A +E+ ++ M
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ VT+NI++D F + G + ++ L M P +T +++ + G
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ +L+ + +T+ + ++ R + + + + ++ M Q+GC P+ VT+ T+
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464
Query: 315 VRAYSTNGMKNHAKEF 330
+ G+ A E
Sbjct: 465 INFMCKKGLVEQAIEL 480
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 153/338 (45%), Gaps = 8/338 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A+++ M G N + +L + +++A LL M DC
Sbjct: 292 GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCP 350
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M G P+ +TY T+I+ + + + E +
Sbjct: 351 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 410
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M + C+P+ + L+ + + +D E Q G P+ TFN L++
Sbjct: 411 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ-GCLPNPVTFNTLINFMC 469
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G E+ +++ M S +++Y+ VID G+AG ++ L +M ++ I P+ +
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
S+ A G+ +K+ + I ++ + D +N ++ + + M
Sbjct: 530 IYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY ++R ++ G+ +E QDL+ ++
Sbjct: 590 VSNGCMPNESTYTILIRGLASEGL---VREAQDLLSEL 624
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 40/319 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLE--HMKNTPDCQPDVNTYSI 68
A + M GC A +L A R G F A L+ H K C D ++
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG---CTLDSGNCNL 183
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + + D+ LL + + G P+ V+YN ++ AK + ++E +V+M+
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T N + +G + + + + G P + + ++D K GH E +
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M Y +V YN V+ A ++ E L M E
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE---------------- 347
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
D LD V FN LVD + + + +LE M + GC PD
Sbjct: 348 -------------------DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388
Query: 309 VTYRTMVRAYSTNGMKNHA 327
+TY T++ + G+ + A
Sbjct: 389 ITYTTVINGFCKEGLVDEA 407
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 131/325 (40%), Gaps = 9/325 (2%)
Query: 16 QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CL 74
+A+ G A ++ A+++ Y R+G + + P P+ TY +++S C
Sbjct: 65 RALDTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAAVP-VPPNAYTYFPIVRSLCA 120
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ D + +L +M +G + +++A R F L + ++ C D
Sbjct: 121 RGLIADAL-TVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSG 179
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
N + A G +D + K S G +P I ++N +L A ++ + +M M
Sbjct: 180 NCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM 239
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ + T+N +I R G +Q+ M P +++ G
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E +L + + + + V +N ++ + + E + +L M Q C D VT+ +
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDE 339
V + NG+ + E L+E+M E
Sbjct: 360 VDFFCQNGLVDRVIE---LLEQMLE 381
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL M+++G NT ++++ SA R G DK + + +++ +
Sbjct: 503 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDA-TVRS 561
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K + D+ + M + G PN TY LI + E +
Sbjct: 562 DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ--- 618
Query: 122 VKMLSEDC 129
+LSE C
Sbjct: 619 -DLLSELC 625
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 3/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++F + + GC + ++ LL AYG+SG D+ F + + M + +C+P+ T++I
Sbjct: 804 EIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM-SAHECEPNTITHNI 862
Query: 69 LIKSCLKAFAFDKVQALLSD-MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +KA D L D MS + P TY LID ++ E + M
Sbjct: 863 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDY 922
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P+ N + FG +G+ D +++ G++P + T+++L+D G ++
Sbjct: 923 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 982
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVR 246
+++ + +V YN++I+ G+ L++ LF M+ R I P T SL+
Sbjct: 983 LHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLIL 1042
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G AG E+ G + I + + + FN L+ Y V + M G P
Sbjct: 1043 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1102
Query: 307 DKVTYRTM 314
+ TY +
Sbjct: 1103 NTGTYEQL 1110
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 49 LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
L E QP + TY++LI L+A + Q + + G P+ TYN L+DAY
Sbjct: 773 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY 832
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPS 167
G++ E+ +M + +CEP+ T N + +G + D ++ Y+ P+
Sbjct: 833 GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 892
Query: 168 INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
T+ L+D K+G + + E M Y YNI+I+ FG+AG+ LF+
Sbjct: 893 ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK 952
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
M E ++P T LV G+ ++ R + S + D V +N +++ G+
Sbjct: 953 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012
Query: 288 CFAEMKGVL-EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
E + E+ + RG PD TY +++ GM A + + +++
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 144/314 (45%), Gaps = 1/314 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E L + M G N +FT + GR+G ++A+ +L+ M + C P
Sbjct: 235 LGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGP 293
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY++LI + A D + + + M T +P+ VTY TL+D + + +
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + PDV T + A +G + + GI P+++T+N L+ +
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + + M+ T TY + ID +G++GD F M+++ I P+ V
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + + AG+ + + + + ++ D+V +N ++ Y ++ E +L M +
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE 533
Query: 302 RGCKPDKVTYRTMV 315
C+PD + +++
Sbjct: 534 NCCEPDVIVVNSLI 547
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ ++ + M +G + +FT L+ A ++G F +AF+ L+ M++ P+++TY+
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQ-GILPNLHTYNT 405
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI L+ D + +M + G++P TY ID YG++ T KM ++
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P++ N +L + +G+ ++ + + G+ P T+N+++ Y K G ++
Sbjct: 466 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 525
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + ++ N +I+ +A + + +F M+ ++KP+ VT +L+
Sbjct: 526 KLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 585
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK ++ + + +T+ FN L D + +L M GC PD
Sbjct: 586 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 645
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY T++ NG A F ++K+
Sbjct: 646 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL 674
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 2/337 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + +A+E+ + M DEGC + ++T L+ A + D A + MK T +
Sbjct: 269 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMK-TGRHK 327
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY L+ D V S+M G P+ VT+ L+DA +A F E
Sbjct: 328 PDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK 387
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + P++ T N + ++D + ++ +S G++P+ T+ + +D YGK
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGK 447
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E M+ + IV N + + +AG ++ + +F ++ + P VT
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y G+ ++ +L + + D + N L++ + E + M+
Sbjct: 508 YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 567
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+ KP VTY T++ NG A E F+ +V+K
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 604
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + ++ E+++ M C+ NT + ++S ++G D A L + + D P
Sbjct: 833 GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 892
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K+ + + L MS G RPN YN LI+ +G+A
Sbjct: 893 ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK 952
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD+ T + + G++D + + + +G+ P + +N++++ GK
Sbjct: 953 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012
Query: 183 HFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E+ + M+K + + TYN +I G AG +++ ++ ++ ++P+ T
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072
Query: 242 CSLVRAYGHAGKPE 255
+L+R Y +GKPE
Sbjct: 1073 NALIRGYSLSGKPE 1086
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A +LF+ M D GC N + L++ +G++G D A +L + M +P
Sbjct: 903 LSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE-GVRP 961
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ TYS+L+ D+ ++ G+ P+ V YN +I+ G+ E +
Sbjct: 962 DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLF 1021
Query: 122 VKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M S PD++T N + G +G ++ K Y + Q AG++P++ TFN L+ Y
Sbjct: 1022 NEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1081
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTY 206
+G E AV + M +S TY
Sbjct: 1082 SGKPEHAYAVYQTMVTGGFSPNTGTY 1107
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 128/317 (40%), Gaps = 38/317 (11%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + TYS L+ K + V LL +M T G++PN T+ I GRA E
Sbjct: 222 RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 281
Query: 120 TLVKMLSEDCEPDVWTMN------CTLRA-----------------------------FG 144
L +M E C PDV T CT R F
Sbjct: 282 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFS 341
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
++ +D++ + + + + G P + TF IL+D+ KAG+F + A ++ M+ +
Sbjct: 342 DNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLH 401
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +I R L +F M S +KP+ T + YG +G +
Sbjct: 402 TYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
I + V N + + + E K + ++ G PD VTY M++ YS G
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521
Query: 325 NHAKEFQDLVEKMDETC 341
+ A + L+ +M E C
Sbjct: 522 DEAIK---LLSEMVENC 535
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D NTY + K + L M G N +YN LI +++ E
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + P + T + + G I+++ ++ ++ G++P++ TF I + G+A
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + +++ M +VTY ++IDA A L + +F M++ R KP VT
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + ++ + D V F LVDA + F E L+VM+
Sbjct: 334 ITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRD 393
Query: 302 RGCKPDKVTYRTMV 315
+G P+ TY T++
Sbjct: 394 QGILPNLHTYNTLI 407
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 2/216 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F + D G ++ ++ ++ Y + G D+A LL M C+P
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENC-CEP 538
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI + KA D+ + M ++P VTYNTL+ G+ E
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + C P+ T N + ++ K K G P + T+N ++ K
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
G ++ M+K Y VT ++ +AG
Sbjct: 659 GQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKAG 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 35/237 (14%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L A G+I+ M ++ Q I+ NT+ + G + + M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181
Query: 195 QKYHYSWTIVTYN---------------------IVIDAF--------------GRAGDL 219
+++ + +YN +++D F G+ D+
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + L + M + +KP+ T +R G AGK + +L+ +D+ D V + L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+DA + K V M+ KPD+VTY T++ +S N + +F +EK
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 154/351 (43%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + K + MV +GC N ++ ++ A G++ + DKA +L M + DCQ
Sbjct: 19 MSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKMIES-DCQ 77
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYSI L+K+ K+ + ++
Sbjct: 78 PNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASEAHSVFCR 137
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + + + ++++A A+ AE L M + DV N A G Q
Sbjct: 138 MWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQ 197
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ M Y+K ++ G+ P + T+NI++ S+G+ G +K S + E M ++TYN
Sbjct: 198 VSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNS 257
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T L+ +G + K + S+ +
Sbjct: 258 MINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQG 317
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + V +N L+D R E + E ++Q+G PD +TY + R S
Sbjct: 318 CVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSITYSILERLES 368
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+C PD TY+ILI+ KA K + L +M ++G N + YNT+I+A G+ KM +
Sbjct: 5 NCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKA 64
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L KM+ DC+P+ +T + L GQ+ + + + S + S+ ++ L+ +
Sbjct: 65 IFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILD-ICSGHLNRSVYSY--LVKA 121
Query: 178 YGKAGHFEKMSAVMEYMQKYH-----------------------------------YSWT 202
K+GH + +V M H +
Sbjct: 122 LCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTD 181
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+ YNI+ A G+ + M L+ M++ + P T ++ ++G G +K +
Sbjct: 182 VGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFE 241
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+D+S D + +N +++ G+ E + + MQ++G PD TY ++ +
Sbjct: 242 EMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECF 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M+ P T L+R G AGK K S L + + +L+ + +N +++A G+ K
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ +L M + C+P++ TY M+ +T G + E D+
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDI 105
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K++ PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKSS-GYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N L+ YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 122 GIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 31 VFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 89
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 90 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHL 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 150 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 209
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 210 VGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 265
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 266 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 325
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 326 GLGYFPDSDVIAIVLNAY 343
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ S PD+ N + FG + + ++AG+ P+ +++ LL Y +
Sbjct: 12 RLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYVENK 71
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F + +V M++ + T NI+ID +G+ G K+ + LF MR I+P+ V+
Sbjct: 72 KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 131
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LVR YG A + + R + +I + V +N ++ YG+ + +++ MQ R
Sbjct: 132 TLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSR 191
Query: 303 GCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
G +P+ +TY T++ + G + A FQ L
Sbjct: 192 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKL 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 173 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GXEID 231
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 232 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 287
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + D+ + + + + ++K + G P + I+L++YGK
Sbjct: 288 QAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 154/353 (43%), Gaps = 35/353 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---- 57
LGK +P+ A F + + +AL+SAY RSGL +A +LE MK
Sbjct: 219 LGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPT 278
Query: 58 ----------------DCQ---------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D + PD T++ L+ +C +A + + +
Sbjct: 279 TVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVF 338
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+M G + TYNT +DA + ++ M + + +P+V T + + F
Sbjct: 339 DEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKL 398
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ D K EK +S IQ +N LL Y K G +++++ V E M+K VTY
Sbjct: 399 EKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTY 458
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I+ +G+ G L + +L + MR++ + PS +T +L+ Y AG +V
Sbjct: 459 NSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKE 518
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
S + D V F+ +D + +L+ M + G KP+ VTY T++ A+
Sbjct: 519 SGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFG 571
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC A ++ M N +++ L+ + + +D+A L E MK+ Q D
Sbjct: 362 KCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSL-RIQLDR 420
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ L+ +K +D++ + +M GI +TVTYN+LI+ YG+ + +
Sbjct: 421 VCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQD 480
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ P V T + + + +G Y F+ +G++ + F+ +D+ K G
Sbjct: 481 MRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGL 540
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
E ++++ M K +VTYN +IDAFG++
Sbjct: 541 VECALSLLDEMMKMGIKPNVVTYNTIIDAFGKS 573
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ LL+ Y ++G +D+ ++ E M+ + D TY+ LI K D V L+ DM
Sbjct: 423 YNTLLAIYVKTGKYDEIATVCEEMEKL-GIEKDTVTYNSLINGYGKQGRLDMVAFLVQDM 481
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
QG+ P+ +TY+TLID Y +A M + + + DV + + +G +
Sbjct: 482 RAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLV 541
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTIV-TYN 207
+ ++ GI+P++ T+N ++D++GK+ F E+ S + + Y +V N
Sbjct: 542 ECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGVYGGQVVRVTN 601
Query: 208 IVIDAFGRAGDLKQMEY--------LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK--- 256
VI A D++ LF+ M + ++P+ VT +++ A E
Sbjct: 602 PVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAAL 661
Query: 257 LGSVLRFIDNS 267
L LR DNS
Sbjct: 662 LLEQLRLFDNS 672
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + L Q M +G + +++ L+ Y ++G+ AF++ K + + D
Sbjct: 466 GKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKES-GLKAD 524
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +S I + K + +LL +M GI+PN VTYNT+IDA+G++K+F E + +
Sbjct: 525 VVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIG 584
Query: 123 KM--LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC---------YEKFQSAGIQPSINTF 171
M + V N +R G S M + ++K G++P++ TF
Sbjct: 585 DMGIVGVYGGQVVRVTNPVIRG-GRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTF 643
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ +L++ + FE + ++E ++ + S V Y +++
Sbjct: 644 SAILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLM 682
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F +L Y + GL +K S + + D Y+ +I C +A D++ + +M
Sbjct: 685 FLDMLRTYQKCGLLEK-LSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEM 743
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
QG NTVT N L+D YG+A +F + E + M + D+ + N + A +G
Sbjct: 744 IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDF 802
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+M ++ Q AG S+ +N +LD+YGKAG E+ +AV++ M++ + TYNI+
Sbjct: 803 RSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIM 862
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I+ +GR G ++ + + ++S +P + +L++AYG AG PE +++ + I
Sbjct: 863 INIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGI 922
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
D V + L+ A R + F E M+Q G
Sbjct: 923 AADRVTYTNLIAALQRNENFLEAVKWSLWMKQTG 956
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 153/331 (46%), Gaps = 6/331 (1%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++ CK+ + A ++ M N + + +++ + F A +L +K +
Sbjct: 582 LICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKAS- 640
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAE 116
C D+ YS++++ KA + +L DM Q I P+ + ++ Y + + +
Sbjct: 641 SCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEK 700
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ T +L E D NC + G + +D + + +++ G + T N+LLD
Sbjct: 701 LSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLD 760
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
YGKAG F K V +K + I++YN +I A + GD + M Y + M+
Sbjct: 761 IYGKAGLFNKAEKVFLMARKQGMA-DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPV 819
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S ++ AYG AG+ E+ +VL+ ++ + D +N +++ YGR + VL
Sbjct: 820 SLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVL 879
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ RG +PD +Y T+++AY GM A
Sbjct: 880 AELKSRGGEPDLYSYNTLIKAYGIAGMPEDA 910
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L+ + C + +++ ++ Y ++G + A +LE M+ + PD + ++
Sbjct: 630 AEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDML 689
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ K +K+ + + + YN +I+ GRA E+ +M+ +
Sbjct: 690 RTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHL 749
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+ T+N L +G +G + EK + + G+ I ++N ++ ++ K G F M
Sbjct: 750 ANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGM-ADIISYNTIIAAHAKNGDFRSMIYF 808
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ MQ+ + ++ YN ++DA+G+AG L++ + + M + T ++ YG
Sbjct: 809 VQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGR 868
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E + +VL + + D +N L+ AYG + +++ M+ +G D+VT
Sbjct: 869 KGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVT 928
Query: 311 YRTMVRAYSTN 321
Y ++ A N
Sbjct: 929 YTNLIAALQRN 939
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 7/293 (2%)
Query: 9 EKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
E A +L MV D GC + Q+F L+ + L D L HM D QP+V+T
Sbjct: 244 EAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGTKWL-HMMLERDVQPNVSTVG 302
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + + + + M GI+ Y+ ++ Y R FA+ E + M ++
Sbjct: 303 MLMGLYQRIGNLPEAEFTFAKMRKCGIKCVN-AYSAMVTLYTRLGHFAKSEEVITLMNND 361
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ P++ L A+ G+++ E + GI ++ +N ++ YGK +K
Sbjct: 362 EVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKA 421
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V + ++ + TY +I+ FGRA KQ +R +R+ KP+ +++
Sbjct: 422 MEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINL 481
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
E +L + + ++ LV AYG + M VL++++
Sbjct: 482 LARHDDSEGATEILEDMRAAGCQCSSI-VTVLVRAYGSV---GRMHKVLQILK 530
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 12/303 (3%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N +++ L A ++ A LL M C D ++ LI C K D
Sbjct: 225 GNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGTK 284
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-----EDCEPDVWTMNCT 139
L M + ++PN T L+ Y R E E T KM + + T+
Sbjct: 285 WLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTR 344
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
L F S ++ T+ E + P++ + + L++Y + G E+ V++ +
Sbjct: 345 LGHFAKSEEVITLMNNDE------VVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGI 398
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +V YN VI +G+ D+++ +F ++S + P T S++ +G A K ++
Sbjct: 399 ALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAIL 458
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
R + NS + F +++ R +LE M+ GC+ + +VRAY
Sbjct: 459 YYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAYG 517
Query: 320 TNG 322
+ G
Sbjct: 518 SVG 520
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 115/271 (42%), Gaps = 2/271 (0%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTL 104
A E MK + + Y + +++ ++ LL +M + G + +N L
Sbjct: 210 ALGFFEWMKANGKLKGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGL 269
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
I + ++ L ML D +P+V T+ + + G + E + K + GI
Sbjct: 270 IYVCAKRRLVDWGTKWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI 329
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+ +N ++ ++ Y + GHF K V+ M + + + ++A+ + G +++ E
Sbjct: 330 K-CVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAEL 388
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ + + E I + V +++ YG +K V + ++ + D + +++ +G
Sbjct: 389 VLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFG 448
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
R + + ++ G KP+ + TM+
Sbjct: 449 RADKYKQAILYYRKLRNSGFKPNASNFYTMI 479
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 151/366 (41%), Gaps = 44/366 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +KA E+F + G + ++ +++ +GR+ + +A ++N+ +P+
Sbjct: 413 GKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNS-GFKPN 471
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMEL-- 119
+ + +I + + +L DM G + +++ L+ AYG +M +++
Sbjct: 472 ASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAYGSVGRMHKVLQILK 530
Query: 120 ------------------------TLV----KMLSE------DCEPDVW-TMNCTLRAFG 144
+LV ++L E D E +++ + C+ +
Sbjct: 531 ACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCK--- 587
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G D + Y + + P++ + ++D + F A+ ++ ++
Sbjct: 588 EAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMI 647
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
Y++++ + +AG + + M ++ I P ++R Y G EKL +
Sbjct: 648 AYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYW 707
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
I S + LD +NC+++ GR E+ + + M Q+G + VT ++ Y G+
Sbjct: 708 ILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGL 767
Query: 324 KNHAKE 329
N A++
Sbjct: 768 FNKAEK 773
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 143/349 (40%), Gaps = 39/349 (11%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+++A+++ Y R G F K+ ++ M N + P++ + + + + + ++ + +L
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLM-NNDEVVPNMENWLVRLNAYCQQGKMEEAELVL 390
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ +GI N V YNT+I YG+ + ++ S PD T + FG +
Sbjct: 391 KSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRA 450
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVT 205
+ Y K +++G +P+ + F +++ + E + ++E M+ +IVT
Sbjct: 451 DKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIVT 510
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR--- 262
+++ A+G G + ++ + + ++I + LV + E+ VLR
Sbjct: 511 --VLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKK 568
Query: 263 -----FIDNSDIML-----------DTV----------------FFNCLVDAYGRLKCFA 290
F DN +L D V + ++D + ++ F
Sbjct: 569 WKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFT 628
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ + + ++ C D + Y +VR Y+ G A + +EK E
Sbjct: 629 DAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKE 677
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 161/337 (47%), Gaps = 7/337 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q ++A E F+ M++EG T +F ++ YG +G + SL++ MK C PD
Sbjct: 309 GKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK--LHCAPD 366
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K ++ A +M G++P+ V+Y TL+ A+ M E E +
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ E D +T + R + + ++ +++F AG S ++ +D+YG+ G
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS-EGYSANIDAYGERG 485
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + V Q+ + T++ YN++I A+G + ++ LF M S + P T
Sbjct: 486 YLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV+ A P K L + + + D + + ++ ++ +L + V + M +
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 604
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+PD V Y ++ A++ G A + VE M E
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSY---VEAMKE 638
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+++A + E K+ + +V Y+I+++ KA + VQ+L +M +GI+P TY
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-- 160
TLID Y + + L KM +PD T L+ + + + E+ ++K+
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCD 286
Query: 161 ----SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ + S T+N ++D+YGK+G ++ S + M + T VT+N +I +G
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G L ++ L + M+ P T L+ + E+ G+ + + + + D V +
Sbjct: 347 GQLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
L+ A+ E +G++ M + D+ T + R Y
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMY 447
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L P K + M + G ++ + A++S++ + G + A + + M + +
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY-NIE 607
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y +LI + + + + M GI N+V YN+LI Y + E E
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Query: 121 LVKMLSEDCE----PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
K+L + C PDV+T NC + + + E ++ + G + + TF ++L
Sbjct: 668 YRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLC 725
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y K G FE+ + + + M++ ++YN V+ F G K+ F+ M S I+P
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQP 785
Query: 237 SCVTLCSL 244
T SL
Sbjct: 786 DDSTFKSL 793
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 139/334 (41%), Gaps = 46/334 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--- 65
EK+ F+ G + +++ ++A + AYG G +A + C +VN
Sbjct: 454 EKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVF-------ICCQEVNKRTV 505
Query: 66 --YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+++IK+ + + +K L M + G+ P+ TYNTL+ A M + L K
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M D + +F GQ++ E+ Y++ I+P + + +L++++ G+
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + +E M++ V YN +I + + G L + E ++R ++ SC
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYR-----KLLQSC----- 675
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
N D NC+++ Y + + + + M+QRG
Sbjct: 676 ----------------------NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ ++ T+ M+ Y NG A + + +M
Sbjct: 714 -EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 7/302 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ ++ AYG S +KA L E M + PD TY+ L++ A K + L M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSY-GVTPDKCTYNTLVQILASADMPHKGRCYLEKM 566
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G + + Y +I ++ + E +M+ + EPDV + AF ++G +
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV----MEYMQKYHYSWTIVT 205
E + AGI + +N L+ Y K G+ ++ A+ ++ K Y + T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-DVYT 685
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
N +I+ + +++ E +F M+ +R + + T ++ Y G+ E+ + + +
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMK-QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I+ D + +N ++ + F E + M G +PD T++++ GM
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSK 804
Query: 326 HA 327
A
Sbjct: 805 KA 806
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 30/198 (15%)
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ C E +V N LR G + + ++ +++ GI+P +T+ L+D Y K G
Sbjct: 179 SKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLK 238
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ M K VT IV+ + +A + ++ E F+ + K
Sbjct: 239 VHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKA-------- 290
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+S + L + +N ++D YG+ E + M + G
Sbjct: 291 ---------------------DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI 329
Query: 305 KPDKVTYRTMVRAYSTNG 322
P VT+ TM+ Y NG
Sbjct: 330 VPTTVTFNTMIHIYGNNG 347
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 3/190 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ--PDVNTY 66
++A +AM + G N+ + +L+ Y + G D+A ++ + + + PDV T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + K +A+ M +G N T+ ++ Y + F E +M
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 745
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
D + N L F G+ + +++ S+GIQP +TF L K G +K
Sbjct: 746 MKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKK 805
Query: 187 MSAVMEYMQK 196
+E ++K
Sbjct: 806 AVRKIEEIRK 815
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 183 HFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
H+E+ + E+ + K Y ++ YNI++ G+A + ++ L+ M + IKP T
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y G L + + D V ++ Y + + F + + E ++
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAE---EFFKK 282
Query: 302 RGCKPDKV---------TYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
C +K TY TM+ Y +G A E F+ ++E+
Sbjct: 283 WSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE 327
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 36/328 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD-------- 62
A L+ + C + +++ ++ Y ++G + A S+LE M+ + PD
Sbjct: 602 AETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPDKYLFLDML 661
Query: 63 ------------VNTYSILIKS---------------CLKAFAFDKVQALLSDMSTQGIR 95
+TY ++KS C A D++ + +M G
Sbjct: 662 RTYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFDEMIQLGHM 721
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+T+T N L+D YG+A +F + + M + + D+ + N + A+ +SG +M
Sbjct: 722 ASTITLNVLLDIYGKAGLFNRAQ-KVFNMARKQGQADIISYNTIIAAYAHSGDFRSMTYF 780
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+K Q AG S+ +N +L++YGKAG E+ +AV++ M++ + TYNI+++ +GR
Sbjct: 781 VQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGR 840
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G ++ + Y+ ++S ++P + +L++AYG AG PE +++ + I D +
Sbjct: 841 KGWIEGVAYVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRIT 900
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ L+ A R + F E M+Q G
Sbjct: 901 YTNLIAALQRNENFLEAVKWSLWMKQTG 928
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 6/327 (1%)
Query: 5 CKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
CK+ + A ++ M N + +++ + F A +L +K T C
Sbjct: 558 CKEAGSYDAAVSIYNEMPKSKLHPNLRISCSMIDVFSTMERFTDAETLYLELK-TSACVL 616
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ YS++++ KA + ++L DM Q I P+ + ++ Y + + ++ T
Sbjct: 617 DMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLTDT 676
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+L E D NC + G + +D + + +++ G S T N+LLD YGK
Sbjct: 677 YYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFDEMIQLGHMASTITLNVLLDIYGK 736
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG F + V +K + I++YN +I A+ +GD + M Y + M+ S
Sbjct: 737 AGLFNRAQKVFNMARKQGQA-DIISYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEA 795
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ AYG AG+ E+ +VL+ + + D +N +++ YGR + VL ++
Sbjct: 796 YNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSELK 855
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
RG +PD +Y T+++AY GM A
Sbjct: 856 SRGVEPDLYSYNTLIKAYGIAGMPEDA 882
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 153/333 (45%), Gaps = 38/333 (11%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ S + L++ + ++ L ++A +L K D + N Y IL+ SC +A ++D ++
Sbjct: 512 DATSCSILVTLFVQNSLLEEALCVLRE-KKWKDSDFEDNLYHILVCSCKEAGSYDAAVSI 570
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
++M + PN ++ID + + F + E +++ + C D+ + +R +
Sbjct: 571 YNEMPKSKLHPNLRISCSMIDVFSTMERFTDAETLYLELKTSACVLDMIAYSVIVRMYTK 630
Query: 146 SGQ-------IDTMEKCYE-------------KFQSAGIQPSI-NTF------------- 171
+G+ ++ MEK E +Q G+ + +T+
Sbjct: 631 AGRPEDACSVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLTDTYYWILKSQVECDEA 690
Query: 172 --NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
N +++ G A ++++ + + M + + + +T N+++D +G+AG + + +F +
Sbjct: 691 MNNCIINCCGPAIPVDELTRIFDEMIQLGHMASTITLNVLLDIYGKAGLFNRAQKVFNMA 750
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
R + + ++ +++ AY H+G + ++ + ++ + +NC+++AYG+
Sbjct: 751 RKQG-QADIISYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNAYGKAGQL 809
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
E VL+ M++ C D TY M+ Y G
Sbjct: 810 EEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKG 842
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 128/319 (40%), Gaps = 5/319 (1%)
Query: 9 EKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
EKA F M G + N ++ L A + +A LL M C D ++
Sbjct: 180 EKALGFFVWMKANGKLEKNVDAYHLALQAIAWKEDWRRAELLLHEMVAVSGCTLDARAFN 239
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI C K D + M + ++PN T L+ Y + +E E T KM
Sbjct: 240 GLIYVCAKRRLVDWGTKWFNMMLDREVQPNVSTVGMLMGLYQKTGNLSEAEFTFAKM--R 297
Query: 128 DCEPD-VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+C + + + + SG D E+ + ++ + + L++Y + G E+
Sbjct: 298 ECNVKCINAYSAMITLYTRSGLFDKSEEVIVLMNDDKVIANLENWLVQLNAYSQQGKMEE 357
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ M S +V +N +I +G+ D+++ + +F + + P T S++
Sbjct: 358 AKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIE 417
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+G A K ++ R + S + F +++ R +L+ M GC+
Sbjct: 418 GFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIARHDENESAAEILKDMMAAGCQC 477
Query: 307 DKVTYRTMVRAYSTNGMKN 325
+ +VRAY+ G N
Sbjct: 478 SSII-TILVRAYAQVGGMN 495
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/288 (17%), Positives = 125/288 (43%), Gaps = 2/288 (0%)
Query: 44 DKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYN 102
+KA MK + +V+ Y + +++ + + + LL +M + G + +N
Sbjct: 180 EKALGFFVWMKANGKLEKNVDAYHLALQAIAWKEDWRRAELLLHEMVAVSGCTLDARAFN 239
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LI + ++ ML + +P+V T+ + + +G + E + K +
Sbjct: 240 GLIYVCAKRRLVDWGTKWFNMMLDREVQPNVSTVGMLMGLYQKTGNLSEAEFTFAKMREC 299
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
++ IN ++ ++ Y ++G F+K V+ M + + + ++A+ + G +++
Sbjct: 300 NVK-CINAYSAMITLYTRSGLFDKSEEVIVLMNDDKVIANLENWLVQLNAYSQQGKMEEA 358
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+ + + M E + P+ V +L+ YG +K V ++ + + D + +++
Sbjct: 359 KLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIEG 418
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+GR + E +++ G +P+ + TM+ + + A E
Sbjct: 419 FGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIARHDENESAAEI 466
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 121/292 (41%), Gaps = 7/292 (2%)
Query: 10 KAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A L MV GC + ++F L+ + L D M + + QP+V+T +
Sbjct: 217 RAELLLHEMVAVSGCTLDARAFNGLIYVCAKRRLVDWGTKWFNMMLDR-EVQPNVSTVGM 275
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K + + + M ++ Y+ +I Y R+ +F + E +V M +
Sbjct: 276 LMGLYQKTGNLSEAEFTFAKMRECNVKCIN-AYSAMITLYTRSGLFDKSEEVIVLMNDDK 334
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
++ L A+ G+++ + + G+ P++ FN L+ YGK +K
Sbjct: 335 VIANLENWLVQLNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAK 394
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++K + TY +I+ FGRA + +R ++ +P+ +++
Sbjct: 395 EVFNSLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLI 454
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ E +L+ + + ++ LV AY ++ M VL ++Q
Sbjct: 455 ARHDENESAAEILKDMMAAGCQCSSI-ITILVRAYAQV---GGMNKVLPILQ 502
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 148/403 (36%), Gaps = 73/403 (18%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + Q+MVDEG N +F L++ YG+ KA + ++ PD TY
Sbjct: 356 EEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKA-GLAPDETTYRS 414
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I+ +A +D+ + G +PN + T+I+ R L M++
Sbjct: 415 MIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIARHDENESAAEILKDMMAAG 474
Query: 129 CEPDVWTMNCTLRAFGNSGQID----TMEKCYEK----------------FQSAGIQPSI 168
C+ + +RA+ G ++ ++ C+ K Q++ ++ ++
Sbjct: 475 CQCSS-IITILVRAYAQVGGMNKVLPILQSCFYKKILFDATSCSILVTLFVQNSLLEEAL 533
Query: 169 ---------------NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
N ++IL+ S +AG ++ ++ M K + +ID F
Sbjct: 534 CVLREKKWKDSDFEDNLYHILVCSCKEAGSYDAAVSIYNEMPKSKLHPNLRISCSMIDVF 593
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR----------- 262
E L+ +++ + +VR Y AG+PE SVL
Sbjct: 594 STMERFTDAETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPD 653
Query: 263 ---FID----------------------NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
F+D S + D NC+++ G E+ + +
Sbjct: 654 KYLFLDMLRTYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFD 713
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M Q G +T ++ Y G+ N A++ ++ K +
Sbjct: 714 EMIQLGHMASTITLNVLLDIYGKAGLFNRAQKVFNMARKQGQA 756
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 40/272 (14%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
S+LI+ L+ + +K M G + N Y+ + A + + EL L +M+
Sbjct: 169 SVLIR--LEKHSDEKALGFFVWMKANGKLEKNVDAYHLALQAIAWKEDWRRAELLLHEMV 226
Query: 126 S-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C D N + +D K + +QP+++T +L+ Y K G+
Sbjct: 227 AVSGCTLDARAFNGLIYVCAKRRLVDWGTKWFNMMLDREVQPNVSTVGMLMGLYQKTGNL 286
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ M++ + I Y+ +I + R+G + E + LM +++ +
Sbjct: 287 SEAEFTFAKMRECNVK-CINAYSAMITLYTRSGLFDKSEEVIVLMNDDKVIANLENWLVQ 345
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AY GK E E K +L+ M G
Sbjct: 346 LNAYSQQGKME-----------------------------------EAKLILQSMVDEGV 370
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ V + T++ Y AKE + +EK
Sbjct: 371 SPNVVAFNTLITGYGKVSDMQKAKEVFNSLEK 402
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 148/324 (45%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M GC N ++ L++A+ R+G D A ++ M+ + +P++ T++
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y + E +M
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + A +G ++ + + G++ + TF L+D + K G +
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+E M+K ++V YN +I+ + + G + L R M ++R+KP VT +++ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + ++ D + ++ L+ K + + E M Q G +PD+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
TY T++ + G A D
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHD 492
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+IL+++ ++ ++ DM G PN VTYNTL+ A+ RA E
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E + +P++ T N + +G+++ K +++ G+ P + ++N LL Y
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + AV M + +VT+ +I A +AG+L+Q L MR ++ + V
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G + + + I V +N L++ Y +L + ++ M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ + KPD VTY T++ Y G
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVG 412
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ++F MV EG + S+ LLS Y + G ++ ++ M
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV 290
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + KA ++ AL++ M +G+R N VT+ LID + + + L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M KC GIQPS+ +N L++ Y K
Sbjct: 351 ----------------------------VEEMRKC-------GIQPSVVCYNALINGYCK 375
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + ++ M+ +VTY+ +I + + G+L L + M + + P +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+R + + + + D + L+D + + + + + M
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++G PD VTY ++ S + A
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V N L A ++ + + + G+ P++ T+NIL+ + G E+ V
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTLCSLVRAYG 249
+ M+ + VTYN ++ AF RAG+L E + LMR E KP+ VT S+V
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AG+ E V + + D V +N L+ Y ++ C E V M QRG PD V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
T+ +++ A G + ++ LV +M E L M F
Sbjct: 295 TFTSLIHATCKAG---NLEQAVALVAQMRERGLRMNEVTF 331
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 23/252 (9%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A +L Q M+ +G + ++++L+ + A L E+M Q
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL-GVQ 465
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K +K +L +M +G+ P+ VTY+ LI+ ++ E
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L K+ ED PD + + D + C K + + LL +
Sbjct: 526 LFKLYHEDPVPD-------------NIKYDALMLCCSKAE-------FKSVVALLKGFCM 565
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ V + M ++ Y+I+I R G++++ + M P+ +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625
Query: 241 LCSLVRAYGHAG 252
SLVR G
Sbjct: 626 TISLVRGLFEEG 637
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K PD+ Y+ +I KA F + ++L+ +M T G+ PNT +Y+
Sbjct: 20 YSKAISIFSRLKRL-GFXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTSYS 78
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 79 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 138
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 139 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 198
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 199 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVA 258
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 259 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 294
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 48 VFGKAKLFREARSLIGEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 106
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 107 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 166
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 167 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 226
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 227 VGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 282
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 283 RDTAIHILAGAGRIEEATYVFRQXIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 342
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 343 GLGYFPDSDVIAIVLNAY 360
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 183 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRS 242
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 178
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+
Sbjct: 179 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQ 238
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 239 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 294
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 295 RIEEATYV---------------FRQXIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 338
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 339 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 379
Query: 303 GC 304
GC
Sbjct: 380 GC 381
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 163/341 (47%), Gaps = 9/341 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA + Q ++ +G + ++ L++ ++G A LL+ M+ + QP++ YS L
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSAL 201
Query: 70 IKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I C F D + L S + +GI + VTYN+LID + E+ L KM+ E+
Sbjct: 202 IDGLCKDGFVSDAL-GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD +T N + A G+I + G +P I T+N L++ Y + +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M K ++ YN++ID + + + + LF+ + ++ + P+ + SL+
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++G+ + +L + S D V +N L+DA + E GVL +M ++G KP+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
VTY M+ Y ++N+ +D+ +M ++ L PD
Sbjct: 441 VTYNAMMDGYC---LRNNVNVAKDIFNRMVKSGL---EPDI 475
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 153/330 (46%), Gaps = 2/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ +L MV E D + +F L+ A + G +A +L M + +PD+ TY+
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNA 305
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ + + L + M +G+ P+ + YN LID Y + KM E + ++ +++
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + + N + NSG+I ++K ++ + P + T+NIL+D+ K G +
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M K IVTYN ++D + ++ + +F M ++P + L+ Y
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++ + + + + +++ D +N L+D L ++ +L+ M G PD
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 309 VTYRTMVRAY-STNGMKNHAKEFQDLVEKM 337
+TY ++ A+ T F+ +VE +
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEGI 575
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 4/324 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C + +A ELF MV G + + ++ L+ Y ++ + D+A L + + N +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-N 365
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P + +Y+ LI + V+ LL +M P+ VTYN LIDA + E
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
LV M+ + +P++ T N + + ++ + + + +G++P I +N+L++ Y
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K ++ + + M+ + I +YN +ID G + ++ L M P
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T L+ A+ +K S+ R I I D + +VD + + + L+
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
+ GC P+ TY ++ A +G
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDG 628
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 2/312 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K ++A LF+ + ++ S+ +L+ SG LL+ M + PDV
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDV 405
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI + K + +L M +G++PN VTYN ++D Y + +
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ EPD+ N + + + +D +++ + + P I ++N L+D G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ +++ M S ++TYNI++DAF + + LFR + E I P T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHA 584
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V K + L+ + + + L++A + F E +L M+
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 304 CKPDKVTYRTMV 315
PD +T+ ++
Sbjct: 645 RPPDAITFEIII 656
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 8/277 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F MV G + + ++ L++ Y ++ + D+A L + M++ + PD+ +Y+ LI
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLI 517
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
VQ LL +M G P+ +TYN L+DA+ + + F + ++L + + E
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF-DKAISLFRQIVEGIW 576
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T + + ++ E + G P++ T+ IL+++ K G F + +
Sbjct: 577 PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ +T+ I+I + + + E L R E I V + + +
Sbjct: 637 LSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL----REEMIARGLVNIEKSLNQSHN 692
Query: 251 AGKPEKLG--SVLRFIDNSDIMLDTVFFNCLVDAYGR 285
P G SV F + FNC D R
Sbjct: 693 VFFPASSGFQSVTEFYRVQASHAGSHRFNCTTDPISR 729
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 143/357 (40%), Gaps = 44/357 (12%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F MV T F LL A R G + A SL ++ + P + T++ILI
Sbjct: 43 FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQ-SKGISPSIATFTILINCYF 101
Query: 75 K----AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
AFAF +LL+ + G +PN VT+NT+I+ + M + +L++
Sbjct: 102 HQSHTAFAF----SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN--------------------- 169
D +T + +GQI ++ + + +QP++
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 170 --------------TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
T+N L+D G +++++ ++ M + + T+NI+IDA +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G + + + + +M KP VT +L+ Y + + + + D +
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L+D Y + K E + + + + P +Y +++ +G +H K+ D
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 36/277 (12%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P T ++ L+ A R + ++ S+ P + T + + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+G QP++ TFN +++ + G K + + Y + TY +I+ +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G +K +L + M ++P+ V +L+ G + I I+LD V
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 276 FNCLVD---AYGRLK----------------------------C----FAEMKGVLEVMQ 300
+N L+D + GR + C E +GVL +M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+RG KPD VTY ++ Y + + A+E F +V++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ + A + + ++ GC N Q++T L++A + G F +A LL M++ D P
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN-DRPP 647
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
D T+ I+I L+ DK + L +M +G+
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 6/198 (3%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P NC R +D C+ + P + F+ LL + + GH+ +
Sbjct: 23 QPQNPHKNCRFR------NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAIS 76
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ +Q S +I T+ I+I+ + L + +P+ VT +++ +
Sbjct: 77 LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G K + + + D + L++ + +L+ M++ +P+ V
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Query: 310 TYRTMVRAYSTNGMKNHA 327
Y ++ +G + A
Sbjct: 197 MYSALIDGLCKDGFVSDA 214
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 12/316 (3%)
Query: 31 TALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
ALL+ G++ F K L+ MK+ + QP V T+ ILI K D + M
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDM-NIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214
Query: 91 TQG------IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+ + P+T+ YNTLID + E + KM S+ C P T NC + +
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYC 274
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
SG+I+ K + + ++A I+P++ T N L+D K MQ+ V
Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV 334
Query: 205 TYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
TY + I+AF ++ K ME+L M + P V +L+ AG+ + SV+
Sbjct: 335 TYTVFINAFCNVNNMNKAMEFLDE-MSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + LD V +N L+ + + + L M+ G KPD VTY T++ +S G
Sbjct: 394 LKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGN 453
Query: 324 KNHAKEFQDLVEKMDE 339
A +F ++KM E
Sbjct: 454 FKLAHKF---MKKMTE 466
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 6/320 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A L M + C T +F L++ Y RSG + A L M+N +
Sbjct: 237 GLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA-QIE 295
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T + L+ K M +G++ N VTY I+A+ +
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEF 355
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M + C PD + +G++D K + AG +N+L+ + K
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCK 415
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK-QMEYLFRLMRSERIKPSCV 239
++ + M+ VTYN +I F + G+ K +++ ++ E + P+
Sbjct: 416 KNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVF 475
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDN--SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +L+ AY ++ + + ++N S + +TV +N L+D+ + +L+
Sbjct: 476 TYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLD 535
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M+ RG P+ TY ++ +A
Sbjct: 536 DMKFRGVMPNTTTYNSIFKA 555
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 4/251 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E M +GC + + L+ ++G D A S++ +K C V Y++L
Sbjct: 351 KAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRV-CYNVL 409
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED- 128
I K D+ Q L++M G++P++VTYNTLI + + F + KM E+
Sbjct: 410 ISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGHFEK 186
P V+T + A+ + ID K +++ + + P+ +NIL+DS K
Sbjct: 470 LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNF 529
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++++ M+ TYN + A L + L M + P +T+ L
Sbjct: 530 ALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTE 589
Query: 247 AYGHAGKPEKL 257
G+ KL
Sbjct: 590 WLSAVGEITKL 600
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 134/365 (36%), Gaps = 60/365 (16%)
Query: 25 ANTQSFTALLSAYGRSGLFDKA---FSLLE-HMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
+ QS LL GR G+ D+A FS L+ H KNT N + +I LK+ D
Sbjct: 4 STAQSSVHLLRRLGRIGMVDEALAAFSTLDSHAKNT-------NVRNEIINLLLKSGRVD 56
Query: 81 KVQALLSDM--STQGIRPNT----VTYNTLIDAYGRAKMFAEMELT--LVKMLSEDCEPD 132
+L +M RPN + +N L+ G E E+ + K + PD
Sbjct: 57 NAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPD 116
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + SG + + N LL GKA F KM+ +M
Sbjct: 117 TIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMR 176
Query: 193 YMQKYHYSWTIVT-----------------------------------------YNIVID 211
M+ + T++T YN +ID
Sbjct: 177 KMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLID 236
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ G ++ L MRS++ P+ T L+ Y +G+ E + ++N+ I
Sbjct: 237 GLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEP 296
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ + N LVD + + VMQQ+G K + VTY + A+ N A EF
Sbjct: 297 NVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFL 356
Query: 332 DLVEK 336
D + K
Sbjct: 357 DEMSK 361
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 31 VFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 89
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 90 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 150 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 209
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 210 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 265
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 266 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMR 325
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 326 GLGYFPDSNVIAVVLNAY 343
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N + FG + + + AG+ P+ +++ LL Y + F + +V
Sbjct: 20 PDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYVENKKFLEALSV 79
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M++ + T NI+ID +G+ G K+ + LF MR I+P+ V+ +L+R YG
Sbjct: 80 FSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGD 139
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + + R + +I + V +N ++ YG+ + +++ MQ RG +P+ +T
Sbjct: 140 AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 199
Query: 311 YRTMVRAYSTNG-MKNHAKEFQDL 333
Y T++ + G + A FQ L
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKL 223
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 103 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 161
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 162 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 221
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 222 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 277
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + +
Sbjct: 278 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVXEVF 321
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L F + V MQ+
Sbjct: 322 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLXEFDKANDVYMEMQEV 362
Query: 303 GC 304
GC
Sbjct: 363 GC 364
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 148/319 (46%), Gaps = 2/319 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F+ G + S+TAL+ +G+ ++K + M+ C PD+ ++LI
Sbjct: 164 AMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRN-RCPPDLKLCTVLI 222
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ ++ + QG++P+ + Y L+ AY + ++ E E TL ML
Sbjct: 223 STYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIV 282
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D + A+G +G D + K E +++G++ S +N L++ + KA EK AV
Sbjct: 283 DD-RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAV 341
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ MQ +TY V++A+ R E + M+ I+P V+ L+ AY
Sbjct: 342 LQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCR 401
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ +LR + N+ +N ++ Y K ++ + + + MQ G +PD VT
Sbjct: 402 AGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVT 461
Query: 311 YRTMVRAYSTNGMKNHAKE 329
+ T++ Y + + A++
Sbjct: 462 FNTLISMYIKSRKRKQAED 480
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M+D G + + + AL++AYG++GL D +LE MK + + Y+
Sbjct: 267 EEAEKTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKILETMKAS-GVEASTTLYNT 324
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA A +K +A+L M G + + +TY ++++AY R K E + +M
Sbjct: 325 LINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAG 384
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P + + A+ +G++ E+ Q+A +P++ +N+++ Y A +
Sbjct: 385 IQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAE 444
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + MQ VT+N +I + ++ KQ E + M+ KP+ VT L++AY
Sbjct: 445 RMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAY 504
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 7/271 (2%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ + +C+K + G++P+ V+Y LI +G+ K + ++
Sbjct: 145 VKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFS 204
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PD+ + +GN G E + Q+ G+QP + L+ +Y + G
Sbjct: 205 RMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEG 264
Query: 183 HFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+E+ + M IV Y ++ A+G+AG + + M++ ++ S
Sbjct: 265 LWEEAEKTLSDM----LDVGIVDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTT 320
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ + A PEK +VL+ + D + + +++AY R K + ++ M
Sbjct: 321 LYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEM 380
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G +P V+Y ++ AY G A+
Sbjct: 381 KRAGIQPGPVSYGVLISAYCRAGRLGDAERI 411
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + PEKA + Q M +GC + ++T+++ AY R+ A S++ MK QP
Sbjct: 331 KAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRA-GIQPGP 389
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+Y +LI + +A + +L M +P YN +I Y AKM ++ E
Sbjct: 390 VSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQT 449
Query: 124 MLSEDC--EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M +DC PD T N + + S + E CY + Q G +P+ T+ ILL +Y
Sbjct: 450 M--QDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAY 504
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
KQP A + M G S+ L+SAY R+G A +L M+N C+P V
Sbjct: 368 KQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNA-KCKPTVEI 426
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+++I A + + + M G+RP+ VT+NTLI Y +++ + E ++M
Sbjct: 427 YNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQ 486
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
C+P+ T L+A+ + E+ + AGI
Sbjct: 487 QLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAGI 525
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+++F+ AG++P + ++ L+ +GK + K++ V MQ+ + ++I +G
Sbjct: 168 FKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGN 227
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI-MLDTV 274
G E + +++ ++P + +LV AY G E+ L D D+ ++D
Sbjct: 228 GGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLS--DMLDVGIVDDR 285
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ LV AYG+ + +LE M+ G + Y T++ +S A+ L+
Sbjct: 286 PYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLM 345
Query: 335 E 335
+
Sbjct: 346 Q 346
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 175 LDSYGKAGHFEKMSAVM--EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L S+G F + A +Y++ ++ YN + + G ++ +F+
Sbjct: 115 LRSWGSRAAFTIVQATSSSDYLEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGA 174
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR--LKCFA 290
+KP V+ +L++ +G K+ V + + D L+ YG L A
Sbjct: 175 GLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLA 234
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
E ++ Q +G +PD + Y +V AY+ G+ A K D+++
Sbjct: 235 E--SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLD 278
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 5/333 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A +F MV +GCD N+ +++ L++ G ++A +LE M
Sbjct: 244 ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-G 302
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V TY+I + S A + LL M +G PN T+ LI R F E+
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF-EIA 361
Query: 119 LTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ L KML++ P T N + G+ +T ++ S G PS T+N ++
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G +K + + M K S ++TYN +I + + G+L L +M+ +KP
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ + GK E S+ + I + V + ++D Y L + +
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M + G P TY M+ +S + A+ F
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 3/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ++ + MV +G + ++T L + +G +A LL MK C P++ T++
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR-GCVPNIQTFTA 347
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
LI + F+ L M G+ P TVTYN LI+ F E T+ K MLS
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF-ETAFTIFKWMLSH 406
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P T N ++ F G I ++K AG P++ T+N L+ Y K G+
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++E M+ TY +I F R G L+ LF M I P+ VT +++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + K + ++ + S + + +N ++ + + +E + M ++G P+
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 308 KVTYRTMVRAYSTNG 322
+TY + + NG
Sbjct: 587 VITYTSFIDGLCRNG 601
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 1/293 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++T+L+ + R+ D AF++ + M C P+ TYS LI ++ +
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L +M +GI P TY + + A +E L KM C P++ T +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G+ + Y K + G+ P+ T+N L++ G FE + ++M + + T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I F GD+++ +F M P+ +T +L+ Y G +L +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + D + L+ + R + M + G P+ VTY ++ Y
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 129/317 (40%), Gaps = 5/317 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L+ M+ +G T ++ AL++ G F+ AF++ + M + P TY+
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+IK K + M G PN +TYNTLI Y + L M
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD WT + F G+++ + GI P+ T+ ++D Y +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ M + + TYN++I F + + + E M + + P+ +T S +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCK 305
G+ + ++ + + ++ L+ GR + AEM +L + GC+
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAE-DAEMYNLLARLTHYGCE 656
Query: 306 PDKVTYRTMVRAYSTNG 322
P+ TY T+V+ G
Sbjct: 657 PNVDTYTTLVKGLCGEG 673
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 5/310 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F+ M+ G +TQ++ ++ + G KA + + M P+V TY+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNT 452
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + LL M G++P+ TY LI + R M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + N ++D + K +G PS T+N+++ + K +
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M K ++TY ID R G +F M P+ T SL+
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 249 GHAGKPE--KLGSVLRFIDNSDIMLDTVFFNCLVDAY-GRLKCFAEMKGVLEVMQQRGCK 305
G+ E ++ ++L + + + + LV G +C+ E ++ MQ++G +
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY-EADQLVVSMQKKGLQ 691
Query: 306 PDKVTYRTMV 315
P + YR ++
Sbjct: 692 PSEEIYRALL 701
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 136/307 (44%), Gaps = 1/307 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
SFT LL G+ + D A + M N+ +P + T++ +I K + + ++S
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ PN TY +LI + R +M+ + C+P+ T + + + G+
Sbjct: 228 IFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGR 287
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ E+ GI+P++ T+ I L S AG + ++ M+K I T+
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I R G + L+ M ++ + P+ VT +L+ G+ E ++ +++ +
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ T +N ++ + + + + + M + G P+ +TY T++ Y G N+A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 329 EFQDLVE 335
++++
Sbjct: 468 RLLEIMK 474
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 123/336 (36%), Gaps = 41/336 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M++ G N ++TA++ Y D A +L M + + P TY++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-PSSQTYNV 557
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMEL-- 119
+I K + + + M QG+ PN +TY + ID R K+F EME
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 120 ----------------------------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
L ++ CEP+V T ++ G+
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
++ Q G+QPS + LL K E + M + + Y +I
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A + +++ + +F+ M + V L+ G+ + +L +++ + L
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTL 797
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + L L C ++ ++ QQ G D
Sbjct: 798 NFQTYVMLARELSALDCAIKIP---QISQQLGIVKD 830
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/173 (17%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P+ + +++ S G ++++ + E KY + +T+ ++ ++ G+ +
Sbjct: 129 PADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARD 188
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
++ M + I+PS +T +++ G+ ++ ++ I D + + L+ +
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
R + + M + GC P+ VTY T++ + G +E D++E+M
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG---RLEEAMDMLEEM 298
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 7/309 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A F +M+ +G N ++ L+ A G +A S+L M+ C P+V TY+ L+
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA-GCGPNVVTYNTLV 232
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ +A D + L+ M G++PN VT+N++++ +A + +M+ E
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + N + + +G + + GI P + TF L+ KAG+ E+ +
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M++ VT+ +ID F + G L R M+ RIKPS V +L+ Y
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPD 307
G+ ++ +L ++ + D V ++ ++ AY + C + E+ QQ +G PD
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK-NC--DTHSAFELNQQMLEKGVLPD 469
Query: 308 KVTYRTMVR 316
+TY +++R
Sbjct: 470 AITYSSLIR 478
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 3/278 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+IL+++ + ++L DM G PN VTYNTL+ A+ RA E
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE-R 246
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV M+ E +P++ T N + +G+++ K +++ G+ P ++N L+ Y
Sbjct: 247 LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + +V M + +VT+ +I +AG+L++ L R MR ++ + V
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G + +R + I V +N L++ Y + E + +L M
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
+ +G KPD VTY T++ AY N + A E Q ++EK
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 464
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 146/324 (45%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + M GC N ++ L++A+ R+G D A L+ M+ +P++ T++
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREG-GLKPNLVTFNS 265
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y +A E +M +
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + +G ++ + + G+Q + TF L+D + K G +
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M++ ++V YN +I+ + G + + L M ++ +KP VT +++ AY
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + + ++ D + ++ L+ K ++ + + M + G +PD+
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
TY +++ + G A D
Sbjct: 506 FTYTSLIDGHCKEGNVESALSLHD 529
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 18/331 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A L + M + G N +FTAL+ + + G D A + MK +P V Y+
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQC-RIKPSVVCYNA 405
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
LI D+ + LL +M +G++P+ VTY+T+I AY + + EL +ML +
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN-QQMLEK 464
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T + +R ++ ++ G+QP T+ L+D + K G+ E
Sbjct: 465 GVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESA 524
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGR-AGDLKQMEYLFRLMRSERI------------ 234
++ + M K +VTY+++I+ + A ++ + LF+L + I
Sbjct: 525 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC 584
Query: 235 --KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
K ++ +L++ + G + V + + + + LD ++ L+ + R +
Sbjct: 585 CRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKA 644
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ M Q G P+ + +++R NGM
Sbjct: 645 LSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V N L A ++ + + + ++ S G+ P++ T+NIL+ + GH ++ ++
Sbjct: 154 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ +VTYN ++ AF RAG++ E L +MR +KP+ VT S+V
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AGK E V + + D V +N LV Y + C E V M Q+G PD VT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ +++ G A LV +M E L M F
Sbjct: 333 FTSLIHVMCKAGNLERAVT---LVRQMRERGLQMNEVTF 368
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P+ + YN ++ A A + + MLS+ P+V+T N +RA G
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ AG P++ T+N L+ ++ +AG + ++ M++ +VT+N +++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+AG ++ +F M E + P V+ +LV Y AG + SV + IM D
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V F L+ + ++ M++RG + ++VT+ ++ + G + A
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ AH LF+ M+ G + ++T+L+ + + G + A SL + M PDV T
Sbjct: 484 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA-GVLPDVVT 542
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS+LI K+ + Q LL + + P Y+ L+ +A++ + + L
Sbjct: 543 YSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL------ 596
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
L+ F G ++ +K Y+ + +++L+ + +AG+
Sbjct: 597 --------------LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642
Query: 186 K 186
K
Sbjct: 643 K 643
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 47/376 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K ++++ M +G + ++ LL A ++G+ D+AF + E MK C PD
Sbjct: 140 RSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQK-HCVPDA 198
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ KA K + +M ++G N + +NT+I+A G+ KM ++ L K
Sbjct: 199 YTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSK 258
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
M+ DC+P+ +T + TL GQ+ + + + +F + I ++ L+ S K
Sbjct: 259 MVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCK 312
Query: 181 AGHFEKMSAVMEYMQKYHYSWT-------------------------------IVT---- 205
+GH + V M H IVT
Sbjct: 313 SGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGM 372
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN+V A G+ + + LF M++ I P T ++ +YG G +K + ++
Sbjct: 373 YNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVME 432
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
S D V +N L++ G+ E + + MQ++G PD TY ++ + +
Sbjct: 433 ASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVE 492
Query: 326 HAKEFQDLVEKMDETC 341
A D E + E C
Sbjct: 493 MACSLFD--EMISEGC 506
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + K F MV +GC N +F ++ A G++ + DK +L M DCQ
Sbjct: 207 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQ 265
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYSI L+KS K+ + +
Sbjct: 266 PNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCR 325
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + + ++++ A+ E L M + DV N A G Q
Sbjct: 326 MWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQ 385
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + ++K ++ GI P + T+NI++ SYG+ G +K S + E M+ +VTYN
Sbjct: 386 VSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNS 445
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T L+ +G + K E S+ + +
Sbjct: 446 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 505
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ V +N L+D R E + E M+Q+G PD +TY + R S
Sbjct: 506 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLES 556
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 32/303 (10%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++++ L++ K + +M +G + + YN L+DA +A M + M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C PD +T +R G +G+ +++ S G ++ FN ++++ GK
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM--------EYLFRLMRSERIKP 236
+K+ V+ M + TY+I +D G L ++ ++ R + S +K
Sbjct: 250 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKS 309
Query: 237 SCVT------------------------LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
C + S++ +A K + +L + I+ D
Sbjct: 310 LCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTD 369
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N + A G+LK + + + + M+ G PD TY M+ +Y G+ + A E +
Sbjct: 370 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFE 429
Query: 333 LVE 335
++E
Sbjct: 430 VME 432
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDT 151
G R + +YN ++ R + L LV + D ++ T+N + G
Sbjct: 55 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGM---GGGGVE 111
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
ME+C E G++ S T+ ++ ++ ++ K V E M++ Y I YN+++D
Sbjct: 112 MERCLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLD 171
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A +AG + Q +F M+ + P T L+R G AG+ K S + + +L
Sbjct: 172 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVL 231
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ + FN +++A G+ K ++ VL M + C+P++ TY + +T G + E
Sbjct: 232 NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVL 291
Query: 332 DLVEK 336
D+ +
Sbjct: 292 DICSR 296
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G+R + TY ++ A+ R++ ++ +M + + D++ N L A +G +
Sbjct: 120 SKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMV 179
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D + +E + P T+ IL+ GKAG K + + M ++ +N +
Sbjct: 180 DQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 239
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL----RFID 265
I+A G+ + ++ ++ M +P+ T + G+ +L VL RF++
Sbjct: 240 IEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 299
Query: 266 NS 267
S
Sbjct: 300 RS 301
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 5/333 (1%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A +F MV +GCD N+ +++ L++ G ++A +LE M
Sbjct: 244 ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-G 302
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V TY+I + S A + LL M +G PN T+ LI R F E+
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF-EIA 361
Query: 119 LTLV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ L KML++ P T N + G+ +T ++ S G PS T+N ++
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G +K + + M K S ++TYN +I + + G+L L +M+ +KP
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ + GK E S+ + I + V + ++D Y L + +
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M + G P TY M+ +S + A+ F
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 3/315 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ++ + MV +G + ++T L + +G +A LL MK C P++ T++
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR-GCVPNIQTFTA 347
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
LI + F+ L M G+ P TVTYN LI+ F E T+ K MLS
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF-ETAFTIFKWMLSH 406
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P T N ++ F G I ++K AG P++ T+N L+ Y K G+
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++E M+ TY +I F R G L+ LF M I P+ VT +++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + K + ++ + S + + +N ++ + + +E + M ++G P+
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 308 KVTYRTMVRAYSTNG 322
+TY + + NG
Sbjct: 587 VITYTSFIDGLCRNG 601
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 1/293 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++T+L+ + R+ D AF++ + M C P+ TYS LI ++ +
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L +M +GI P TY + + A +E L KM C P++ T +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G+ + Y K + G+ P+ T+N L++ G FE + ++M + + T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I F GD+++ +F M P+ +T +L+ Y G +L +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + D + L+ + R + M + G P+ VTY ++ Y
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 129/317 (40%), Gaps = 5/317 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A L+ M+ +G T ++ AL++ G F+ AF++ + M + P TY+
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+IK K + M G PN +TYNTLI Y + L M
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD WT + F G+++ + GI P+ T+ ++D Y +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ M + + TYN++I F + + + E M + + P+ +T S +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCK 305
G+ + ++ + + ++ L+ GR + AEM +L + GC+
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAE-DAEMYNLLARLTHYGCE 656
Query: 306 PDKVTYRTMVRAYSTNG 322
P+ TY T+V+ G
Sbjct: 657 PNVDTYTTLVKGLCGEG 673
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 5/310 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +F+ M+ G +TQ++ ++ + G KA + + M P+V TY+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNT 452
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + LL M G++P+ TY LI + R M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + N ++D + K +G PS T+N+++ + K +
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M K ++TY ID R G +F M P+ T SL+
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 249 GHAGKPE--KLGSVLRFIDNSDIMLDTVFFNCLVDAY-GRLKCFAEMKGVLEVMQQRGCK 305
G+ E ++ ++L + + + + LV G +C+ E ++ MQ++G +
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY-EADQLVVSMQKKGLQ 691
Query: 306 PDKVTYRTMV 315
P + YR ++
Sbjct: 692 PSEEIYRALL 701
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 136/307 (44%), Gaps = 1/307 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
SFT LL G+ + D A + M N+ +P + T++ +I K + + ++S
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ PN TY +LI + R +M+ + C+P+ T + + + G+
Sbjct: 228 IFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGR 287
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ E+ GI+P++ T+ I L S AG + ++ M+K I T+
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I R G + L+ M ++ + P+ VT +L+ G+ E ++ +++ +
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ T +N ++ + + + + + M + G P+ +TY T++ Y G N+A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 329 EFQDLVE 335
++++
Sbjct: 468 RLLEIMK 474
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 123/336 (36%), Gaps = 41/336 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF M++ G N ++TA++ Y D A +L M + + P TY++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-PSSQTYNV 557
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMEL-- 119
+I K + + + M QG+ PN +TY + ID R K+F EME
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 120 ----------------------------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
L ++ CEP+V T ++ G+
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
++ Q G+QPS + LL K E + M + + Y +I
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A + +++ + +F+ M + V L+ G+ + +L +++ + L
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTL 797
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + L L C ++ ++ QQ G D
Sbjct: 798 NFQTYVMLARELSALDCAIKIP---QISQQLGIVKD 830
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/173 (17%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P+ + +++ S G ++++ + E KY + +T+ ++ ++ G+ +
Sbjct: 129 PADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARD 188
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
++ M + I+PS +T +++ G+ ++ ++ I D + + L+ +
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
R + + M + GC P+ VTY T++ + G +E D++E+M
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG---RLEEAMDMLEEM 298
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 153/328 (46%), Gaps = 4/328 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ELF MV G + N S+ +++ ++G A + + M+ C+PD
Sbjct: 172 GKIKE---AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN-GCKPD 227
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I S K + LS+M +GI PN TYN ++ + E
Sbjct: 228 VVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFK 287
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ D PD T+ + G + +E G++P+I+T+N L+D Y
Sbjct: 288 EMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQR 347
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ V E M + + + +YNI+I+ F ++ + + + L M + + P VT
Sbjct: 348 LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L++ G+P++ ++ + + + ++ + V ++ L+D + + E +L+ MQ++
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+P+ V + ++ G AKE
Sbjct: 468 KLEPNIVHHTILIEGMFIAGKLEVAKEL 495
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A LF+ MV +T + T L+ + G+ +A + E M +P+++TY
Sbjct: 278 QLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK-GVEPNISTY 336
Query: 67 SILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ L+ CL+ ++ + + M QG P +YN LI+ + +++ E + L +M
Sbjct: 337 NALMDGYCLQRL-MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PD T + ++ G+ +++ S G+ P++ T++ILLD + K GH +
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ MQ+ IV + I+I+ AG L+ + LF + ++ I+P+ T ++
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ G ++ + R +++ + ++ +N ++ +
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 553
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 2/271 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P V + + S K + V +L + M G+ N + N LI+ R
Sbjct: 85 RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM P T N + N G+I + + + G +P++ ++N +++
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSC 238
K G+ V + M++ +VTYN +ID+ + + ME+L ++ I P+
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML-DRGIPPNV 263
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +V + G+ + + + + D+M DTV LVD + +E + V E
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFET 323
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M ++G +P+ TY ++ Y + N AK+
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKK 354
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--- 55
M G C Q +A ++F+ M+ +GC S+ L++ + +S D+A SLL M +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399
Query: 56 TPD-----------CQ--------------------PDVNTYSILIKSCLKAFAFDKVQA 84
PD CQ P++ TYSIL+ K D+
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LL M + + PN V + LI+ A + K+ ++ P + T ++
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G D + K + G P+ ++N+++ + + +++ M +S +
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLS 579
Query: 205 TYNIVID 211
T+ +++D
Sbjct: 580 TFQMLLD 586
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + P V L +F Q T+ + G+ ++ + N+L++ +
Sbjct: 78 RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN 137
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
H + +++ M K T T+N +I+ G +K+ LF M +P+ ++
Sbjct: 138 HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ G V + ++ + D V +N ++D+ + + + L M R
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR 257
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G P+ TY MV + G N A + F+++V +
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 8/337 (2%)
Query: 6 KQPEKAHELFQAMVD---EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M D C N S+ +++ + G DKA++L M + QP+
Sbjct: 179 KRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDR-GIQPN 237
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I KA D+ + + M +G++P+ TYN LI Y + E+ L
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + +PD +T L N+G+ ++ GI+P++ + IL+ Y G
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+M ++ M + S +NI+ A+ + + + ++F M+ + + P V
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYG 417
Query: 243 SLVRAYGHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A G+ + +VL+F + N + + FN LV + + + K M
Sbjct: 418 ALIDALCKLGRVDD--AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+G +PD V + T++ T G A+ DL+E++
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +FQ M+D+G + ++ L+ Y G + + +LE M + +P
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKP 306
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY L+ + + L M +GI+PN Y LI Y +EM L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ PD N A+ ID + K + G+ P + + L+D+ K
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + M + I +N ++ ++ + + M ++ I+P V
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ K ++ ++ + + L+ + + E L+VM
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G KPD+ TY T++ Y G
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAG 567
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C++ A LF +M+ +G N + L+ Y G + LL M PD
Sbjct: 322 GRCRE---ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPD 377
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I+ + K D+ + + M QG+ P+ V Y LIDA + + L
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E P+++ N + + + ++ Y + + GI+P + FN +L + G
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K +++ M++ +++Y +I G + + +M S +KP T
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y AG+ + V R + + I V ++ ++ + F+E K + M
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G + + Y ++ S N + A K FQ L K
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q KA L M G S+T L+ + G D+A L+ M + +PD TY
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTY 556
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ +A D + +M GI P VTY+T++ + F+E + + M++
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ ++W N L + +D K ++ S Q I TFNI++ + K+G E
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + Y + TY ++ + G L++ + LF M P+ L +LVR
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLD 272
H G + G+ L +D + L+
Sbjct: 737 RLLHRGDITRAGAYLCKLDEKNFSLE 762
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
E F ++ G N LL + +A +L +K P+ C PDV +Y
Sbjct: 111 EHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL--VKRMPELGCTPDVVSY 168
Query: 67 SILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ L+K C + A + ++ L ++D + PN V+Y +I+ + + ++
Sbjct: 169 NTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLE 228
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ +P+V T + + +D E +++ G++P +T+N L+ Y G
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++++ ++E M + TY +++ G ++ +LF M + IKP+
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGI 348
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G ++ +L + + + D FN + AY + E + M+Q+G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 304 CKPDKVTYRTMVRA 317
PD V Y ++ A
Sbjct: 409 LSPDVVNYGALIDA 422
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 8/328 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQ---SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ E LF M+ E T +++ L+ + R G + F+ + + ++
Sbjct: 71 ESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+L C + + L+ M G P+ V+YNTL+ + K AE L L+
Sbjct: 131 VINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKR-AEEALELLH 189
Query: 124 MLSE----DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+++ C P+V + + F GQ+D + + GIQP++ T+ ++D
Sbjct: 190 MMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA ++ V + M TYN +I + G K++ + M + +KP C
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ + G+ + + + I + + L+ Y +EM +L +M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ G PD + + AY+ M + A
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 11/307 (3%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY-SILIKSC 73
F M++EG N F +L+ ++KA M N +PDV + +IL C
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-GIRPDVVFFNTILCNLC 494
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K K Q L+ M G RP ++Y TLI + E +L MLS +PD
Sbjct: 495 TKGQVM-KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
WT N L + +G+ID + + GI P + T++ +L F + +
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M W I YNI+++ + + + LF+ + S+ + T ++ A +G+
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY----GRLKCFAEMKGVLEVMQQRGCKPDKV 309
E + I + ++ D VF CL+ G L+ F ++ M++ G P+
Sbjct: 674 NEDAMHLFATISSYGLVPD-VFTYCLIAENLIEEGYLEEFDDL---FSAMEKSGTTPNSR 729
Query: 310 TYRTMVR 316
+VR
Sbjct: 730 MLNALVR 736
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++A +LFQ++ + +F ++ A +SG + A L + ++ P
Sbjct: 633 LSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI-SSYGLVP 691
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
DV TY ++ ++ ++ ++ L S M G PN+ N L+
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 10/335 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDA--NTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TP 57
G CK + ++A EL Q M + CD N ++ + L + + +A L+ +++ +
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD T+S LI K D+ ++ DM G PN +TYN L++ +A
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 235
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI-----NTFN 172
+ M+ + PDV T + + AF + ++D + S G P++ TFN
Sbjct: 236 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFN 295
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
IL+ KAG+FE+ SA+ E M + ++T+ +ID +AG ++ + LM +
Sbjct: 296 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+ P+ VT +LV +G+ E+ L + +S + D++ + LV A R +
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ ++ G PD VTY +V +G A
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQA 450
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 14/340 (4%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ELF+ +V+ G + ++ L+ + ++G ++A L M ++ C
Sbjct: 46 GLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM-SSRGCV 104
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG--IRPNTVTYNTLIDAYGRAKMFAEME 118
P+V TYS+LI K D+ + L+ +M+ + + PN +TYN+ +D + M AE
Sbjct: 105 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE-A 163
Query: 119 LTLVKMLSED---CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L++ L + PD T + + GQID ++ + G P++ T+N L+
Sbjct: 164 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALV 223
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ KA E+ A++E M + ++TY++++DAF +A + + L M S
Sbjct: 224 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 283
Query: 236 PSC-----VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
P+ VT L+ AG E+ ++ + ++ D + F L+D +
Sbjct: 284 PNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 343
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +L++M G P+ VTY +V +G A +F
Sbjct: 344 AARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 383
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
G CKQ +A EL +++ D +T +F+ L+ + G D+A S+ + M
Sbjct: 153 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI-AGG 211
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P+V TY+ L+ KA ++ A++ M +G+ P+ +TY+ L+DA+ +A E
Sbjct: 212 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271
Query: 119 LTLVKMLSEDCEPDVW-----TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
L M S C P+V T N + +G + +E+ + +QP + TF
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+D KAG E +++ M +VTYN ++ ++G +++ M S
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P +T SLV A A + + ++ + + DTV +N LVD + +
Sbjct: 392 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451
Query: 294 GVLEVMQQRGCKPDKVTY 311
VLE M +G +PD T+
Sbjct: 452 TVLEEMVGKGHQPDSFTF 469
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 8/324 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L K E+A L M GC N +++ L++ + G D+A L++ M + + D
Sbjct: 82 LCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 141
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEME 118
P++ TY+ + K + L+ + +R P+TVT++TLID + E
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M++ P+V T N + + +++ E G+ P + T+++L+D++
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTI-----VTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
KA ++ ++ M + + VT+NI+I +AG+ +Q LF M ++
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 321
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
++P +T +L+ AG+ E +L + N + + V +N LV + E
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 381
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRA 317
LE M GC PD +TY ++V A
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYA 405
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANT-----QSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
K + ++A EL M GC N +F L++ ++G F++A +L E M +
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKN 321
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QPDV T+ LI KA + + +L M G+ PN VTYN L+ ++ E
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 381
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+S C PD T + A + + D + + +S G P T+NIL+D
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K+G E+ V+E M + T+ R+G+L L R++ ++ + P
Sbjct: 442 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA 501
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLR 262
T S++ +GK + + ++++
Sbjct: 502 TTCSSILDWVCRSGKLDDVKAMIK 525
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD 58
L K + E+AH + ++MVD+G + +++ L+ A+ ++ D+A LL M + TP+
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Query: 59 C-QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
PD T++ILI KA F++ AL +M + ++P+ +T+ LID +A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M + P+V T N + SG+I+ + E+ S+G P T+ L+ +
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+A + ++ ++ + + VTYNI++D ++G +Q + M + +P
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T + +G +LR + ++ D + ++D R ++K +++
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ +L + R+G +A + P + TY+ +I K+ L ++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G P+ VTYNTLID+ +A E M S C P+V T + + G+I
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 150 DTMEKCYEKF--QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWTIVT 205
D + ++ +S + P+I T+N LD K + +M ++ S VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
++ +ID + G + + +F M + P+ +T +LV A K E+ +++ +
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK-----PDKVTYRTMVRAYST 320
+ + D + ++ LVDA+ + E +L M RGC PDKVT+ ++
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 321 NGMKNHAKE-FQDLVEK 336
G A F+++V K
Sbjct: 304 AGNFEQASALFEEMVAK 320
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ YNIV+ + RAGD + +FR M + + P+ VT +++ K LG+ +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGL---CKSNDLGAGM 57
Query: 262 RFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D V +N L+D+ + E + + M RGC P+ VTY ++
Sbjct: 58 ELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117
Query: 319 STNGMKNHAKEF-QDLVEK 336
G + A+E Q++ K
Sbjct: 118 CKVGRIDEARELIQEMTRK 136
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 47/376 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K ++++ M +G + ++ LL A ++G+ D+AF + E MK C PD
Sbjct: 140 RSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQK-HCVPDA 198
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ KA K + +M ++G N + +NT+I+A G+ KM ++ L K
Sbjct: 199 YTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSK 258
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
M+ DC+P+ +T + TL GQ+ + + + +F + I ++ L+ S K
Sbjct: 259 MVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCK 312
Query: 181 AGHFEKMSAVMEYMQKYHYSWT-------------------------------IVT---- 205
+GH + V M H IVT
Sbjct: 313 SGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGM 372
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN+V A G+ + + LF M++ I P T ++ +YG G +K + ++
Sbjct: 373 YNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVME 432
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
S D V +N L++ G+ E + + MQ++G PD TY ++ + +
Sbjct: 433 ASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVE 492
Query: 326 HAKEFQDLVEKMDETC 341
A D E + E C
Sbjct: 493 MACSLFD--EMISEGC 506
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + K F MV +GC N +F ++ A G++ + DK +L M DCQ
Sbjct: 207 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQ 265
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYSI L+KS K+ + +
Sbjct: 266 PNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCR 325
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + + ++++ A+ E L M + DV N A G Q
Sbjct: 326 MWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQ 385
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + ++K ++ GI P + T+NI++ SYG+ G +K S + E M+ +VTYN
Sbjct: 386 VSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNS 445
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T L+ +G + K E S+ + +
Sbjct: 446 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 505
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ V +N L+D R E + E M+Q+G PD +TY + R S
Sbjct: 506 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLES 556
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 32/303 (10%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++++ L++ K + +M +G + + YN L+DA +A M + M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C PD +T +R G +G+ +++ S G ++ FN ++++ GK
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM--------EYLFRLMRSERIKP 236
+K+ V+ M + TY+I +D G L ++ ++ R + S +K
Sbjct: 250 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKS 309
Query: 237 SCVT------------------------LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
C + S++ +A K + +L + I+ D
Sbjct: 310 LCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTD 369
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N + A G+LK + + + + M+ G PD TY M+ +Y G+ + A E +
Sbjct: 370 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFE 429
Query: 333 LVE 335
++E
Sbjct: 430 VME 432
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDT 151
G R + +YN ++ R + L LV + D ++ T+N + G
Sbjct: 55 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGM---GGGGVE 111
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+E+C E G++ S T+ ++ ++ ++ K V E M++ Y I YN+++D
Sbjct: 112 VERCLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLD 171
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A +AG + Q +F M+ + P T L+R G AG+ K S + + +L
Sbjct: 172 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVL 231
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ + FN +++A G+ K ++ VL M + C+P++ TY + +T G + E
Sbjct: 232 NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVL 291
Query: 332 DLVEK 336
D+ +
Sbjct: 292 DICSR 296
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G+R + TY ++ A+ R++ ++ +M + + D++ N L A +G +
Sbjct: 120 SKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMV 179
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D + +E + P T+ IL+ GKAG K + + M ++ +N +
Sbjct: 180 DQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 239
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL----RFID 265
I+A G+ + ++ ++ M +P+ T + G+ +L VL RF++
Sbjct: 240 IEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 299
Query: 266 NS 267
S
Sbjct: 300 RS 301
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 161/381 (42%), Gaps = 45/381 (11%)
Query: 6 KQPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M D+ C N S++ +++ + G DK ++L M + PD
Sbjct: 179 KRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDR-GIPPD 237
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFA 115
V TY+ +I KA FD+ +A+ M G++PN TYN LI Y G+ +M
Sbjct: 238 VVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 116 EMELTLVK----------------------------MLSEDCEPDVWTMNCTLRAFGNSG 147
EM K M+ + +P V T L + G
Sbjct: 298 EMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKG 357
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ M + GI P+ + FNI +Y K G +K + M++ S V+Y
Sbjct: 358 ALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYG 417
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+IDA + G + E F M +E + P V SLV K EK+ + + N
Sbjct: 418 ALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV 477
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + VFFN ++ + E + +++ ++ G +PD ++Y T++ + G + A
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
+ L+E M L +PD
Sbjct: 538 SK---LLEGMVSVGL---KPD 552
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 2/309 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--DCQPDVNTYSILIK 71
L Q M + GC +T S+ LL ++A LL M + C P+V +YS +I
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
DK L +M +GI P+ VTY T+ID +A++F E +M+ +P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
++ T NC + + + G+ + + E+ + G +P+ T+ LL+ K G +
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M ++ TY I++ + G L +M L LM + I P+ AY
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G +K + + + D V + L+DA +L + + M G PD V +
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451
Query: 312 RTMVRAYST 320
++V T
Sbjct: 452 SSLVYGLCT 460
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 144/347 (41%), Gaps = 33/347 (9%)
Query: 16 QAMVDE----GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
Q +VD G + S+ L+ + +G D+A LLE M + +PD +Y+ L+
Sbjct: 503 QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV-GLKPDSFSYNTLLH 561
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
KA D + M + GI P VTYNT++ + K F+E + + M++ +
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D++T N L S +D K ++ S G+Q +I TFNI++ + K G E +
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ +VTY +V++ G L++ + LF M P+ L +LVR H
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 741
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG--------------------------- 284
G + G+ L +D + ++ + L+ +
Sbjct: 742 GDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALI 801
Query: 285 -RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + + + M +G PD VTY T++ G + AKE
Sbjct: 802 KKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 150/335 (44%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C++ A F +M+ +G + ++ +L Y G + LL M P+
Sbjct: 322 GRCRE---ARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV-ANGISPN 377
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I + K DK + + M QG+ P+ V+Y LIDA + + E+
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E PD+ + + + + +E+ + + + GI P+I FN +L + K G
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ ++ +++YN +ID AG + + L M S +KP +
Sbjct: 498 RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYN 557
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y AG+ + S R + ++ I V +N ++ + K F+E K + M
Sbjct: 558 TLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 617
Query: 303 GCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
G K D TY ++ +N + K FQ+L K
Sbjct: 618 GTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK 652
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 151/372 (40%), Gaps = 39/372 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
KC +KA ++F M +G + S+ AL+ A + G D A M N PD
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN-EGVTPD 447
Query: 63 VNTYSILIKSCLKAFAFDKV-----------------------------------QALLS 87
+ +S L+ ++KV Q L+
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G+RP+ ++YNTLID + A E L M+S +PD ++ N L + +G
Sbjct: 508 SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAG 567
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ID+ + K S GI P + T+N +L + F + + M W I TYN
Sbjct: 568 RIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYN 627
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+++ ++ + + +F+ + S+ ++ + +T ++ A G+ E + I +
Sbjct: 628 IILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ + V + +V+ E + M++ G P+ +VR G + A
Sbjct: 688 GLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747
Query: 328 KEFQDLVEKMDE 339
+ + K+DE
Sbjct: 748 GAY---LSKLDE 756
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 3/327 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A +FQ M+D G N ++ L+ Y G + + +LE M + +
Sbjct: 247 GLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-SAGGPK 305
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY L+ K + + M +GI+P+ TY ++ Y +EM
Sbjct: 306 PNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDL 365
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M++ P+ N A+ G ID + K + G+ P ++ L+D+ K
Sbjct: 366 LNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + M + IV ++ ++ +++E LF M + I P+ V
Sbjct: 426 LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G+ + ++ I+ + D + +N L+D + E +LE M
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
G KPD +Y T++ Y G + A
Sbjct: 546 SVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 141/349 (40%), Gaps = 14/349 (4%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ E LF MV + N +++ L+ + R G + F+ + T +
Sbjct: 71 ESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHI 130
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+L C + + LL M G P+TV+YN L+ K AE L L+
Sbjct: 131 VINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKR-AEEALELLH 189
Query: 124 MLSED----CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M+++D C P+V + + + F GQ+D + + GI P + T+ ++D
Sbjct: 190 MMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLC 249
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA F++ AV + M I TYN +I + G K++ + M + KP+C
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC 309
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ G+ + + I + ++ Y +EM +L +M
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G P+ + AY+ G+ + A D+ KM + L+ PD
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKA---MDIFNKMRQQGLS---PD 412
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 33/307 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLL------------------ 50
E+ LF AM G N+Q AL+ G +A + L
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769
Query: 51 ----------EHMKNTPDCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
H K+ P +N S LIK KA D +L +M +G+ P+
Sbjct: 770 ISIFSSDEYQHHAKSLPKKYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDV 826
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
VTYNT++ + F+E + + M++ + +++T N L S +D K ++
Sbjct: 827 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQS 886
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
S G+Q +I TFNI++ + K G E + + +VTY +V + G
Sbjct: 887 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGS 946
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L++ + LF M L +LVR G + G+ L +D + L+ +
Sbjct: 947 LEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSE 1006
Query: 279 LVDAYGR 285
L+ + R
Sbjct: 1007 LISLFSR 1013
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/373 (17%), Positives = 145/373 (38%), Gaps = 34/373 (9%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A ++FQ + +G N +F ++ A + G + A L + Q
Sbjct: 632 GLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ 691
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY +++++ ++ + ++ +L S M G PN+ N L+ +
Sbjct: 692 -NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 750
Query: 121 LVKMLSEDCEPDVWTMNCTLRAF---------------------GNSG-------QIDTM 152
L K+ + + T + + F NS +ID
Sbjct: 751 LSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDA 810
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + G+ P + T+N +L + G F + + M I TYNI+++
Sbjct: 811 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNG 870
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
++ + + +F+ + S+ ++ + +T ++ A G+ E + I + ++ D
Sbjct: 871 LCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPD 930
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V + + + E G+ M++ G D +VR G + A +
Sbjct: 931 VVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAY-- 988
Query: 333 LVEKMDETCLAMK 345
+ K+DE +++
Sbjct: 989 -LSKLDEKNFSLE 1000
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL+ +M++ N ++ +L+ +S D+AF + + + + Q ++ T++I+
Sbjct: 844 EAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLC-SKGLQLNIITFNIM 902
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + LK + L + + G+ P+ VTY + + E + + M
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGT 962
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKF--QSAGIQPSINTFNILLDSYGKAGHFEK 186
D +N +R G I K ++ ++ S + I L S G+ H K
Sbjct: 963 PLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAK 1021
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 11/314 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S T L+S R G +A ++ + +P + TY+ L+ + + F+ + +LLS
Sbjct: 45 SRTKLMSTLIRKGKPHEAVTIFNSLTEEGH-KPTIITYTTLVAALTRLKRFNSIPSLLSK 103
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ G++P+++ +N +I+A+ + E KM C+P T N ++ FG G+
Sbjct: 104 VEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGR 163
Query: 149 IDTMEKCYE-KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
K E Q ++P+ T+NIL+ ++ E+ VM M IVTYN
Sbjct: 164 PHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 208 IVIDAFGRAGDLKQMEYLFRLMR--SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI- 264
+ AF + G+ E L M+ + ++KP+ T ++R Y G + LRF+
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEG---NMTEALRFLY 280
Query: 265 --DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + V FN L+ Y + ++ L +M++ G KPD VTY T++ A+S++G
Sbjct: 281 KMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSG 340
Query: 323 MKNHAKE-FQDLVE 335
+ ++ +E F D+V+
Sbjct: 341 LMDNCEEIFDDMVK 354
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 157/342 (45%), Gaps = 14/342 (4%)
Query: 10 KAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
K HE +F+ M + GC T +F L+ +G G +A LLE M + +P+ TY
Sbjct: 128 KVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTY 187
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM-- 124
+ILI++ ++ ++ M G++P+ VTYNTL A+ + E ++KM
Sbjct: 188 NILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQ 247
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ +P+ T +R + G + + K + G+ P+ FN L+ Y
Sbjct: 248 YNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDT 307
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + + M+++ +VTY+ +++A+ +G + E +F M I+P L
Sbjct: 308 DGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSIL 367
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQ 301
+ Y AG+P+K ++L + + + V F ++ + G++ C + E M +
Sbjct: 368 AKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRL---YEKMNE 424
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
G + TY T++ Y G + ++L+ M+E+ +A
Sbjct: 425 MGTPLNLKTYETLIWGY---GEAKQPWKAEELLVTMEESGVA 463
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQPDVNTYS 67
E+A + MV+ G + ++ L A+ ++G D A L+ M+ + +P+ T
Sbjct: 201 EEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCG 260
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
I+I+ K + L M G+ PN V +N+LI Y +E L M
Sbjct: 261 IIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 320
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+PDV T + + A+ +SG +D E+ ++ A I+P I ++IL Y +AG +K
Sbjct: 321 GIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKA 380
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A++ M KY +V + +I + AG + L+ M + T +L+
Sbjct: 381 EALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWG 440
Query: 248 YGHAGKPEKLGSVLRFIDNSDI 269
YG A +P K +L ++ S +
Sbjct: 441 YGEAKQPWKAEELLVTMEESGV 462
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++ ++ Y + G +A L MK P+ ++ LIK L D V+
Sbjct: 255 NERTCGIIIRGYCKEGNMTEALRFLYKMKEL-GVHPNPVVFNSLIKGYLDITDTDGVEEA 313
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L+ M GI+P+ VTY+T+++A+ + + E M+ + EPD+ + + +
Sbjct: 314 LTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVR 373
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+GQ D E G+Q ++ F ++ + AG + + E M + + T
Sbjct: 374 AGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKT 433
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
Y +I +G A + E L M + P T+
Sbjct: 434 YETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTI 469
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 64/133 (48%)
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T+++ ++ R G + +F + E KP+ +T +LV A + + S+L
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ + + D++ FN +++A+ E + M++ GCKP T+ T+++ +
Sbjct: 102 SKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV 161
Query: 322 GMKNHAKEFQDLV 334
G + A + +++
Sbjct: 162 GRPHEAMKLLEMM 174
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F +L Y + GL +K S + + D Y+ +I C +A D++ + +M
Sbjct: 685 FLDMLRTYQKCGLLEK-LSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEM 743
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
QG NTVT N L+D YG+A +F + E + M + D+ + N + A +G
Sbjct: 744 IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDF 802
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+M ++ Q AG S+ +N +LD+YGKAG E+ +AV++ M++ + TYNI+
Sbjct: 803 RSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIM 862
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I+ +GR G ++ + + ++S +P + +L++AYG AG PE +++ + I
Sbjct: 863 INIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGI 922
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
D V + L+ A R + F E M+Q G
Sbjct: 923 AADRVTYTNLIAALQRNENFLEAVKWSLWMKQTG 956
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 153/331 (46%), Gaps = 6/331 (1%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++ CK+ + A ++ M N + + +++ + F A +L +K +
Sbjct: 582 LICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKAS- 640
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAE 116
C D+ YS++++ KA + +L DM Q I P+ + ++ Y + + +
Sbjct: 641 SCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEK 700
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ T +L E D NC + G + +D + + +++ G + T N+LLD
Sbjct: 701 LSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLD 760
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
YGKAG F K V +K + I++YN +I A + GD + M Y + M+
Sbjct: 761 IYGKAGLFNKAEKVFLMARKQGMA-DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPV 819
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
S ++ AYG AG+ E+ +VL+ ++ + D +N +++ YGR + VL
Sbjct: 820 SLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVL 879
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ RG +PD +Y T+++AY GM A
Sbjct: 880 AELKSRGGEPDLYSYNTLIKAYGIAGMPEDA 910
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L+ + C + +++ ++ Y ++G + A +LE M+ + PD + ++
Sbjct: 630 AEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDML 689
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ K +K+ + + + YN +I+ GRA E+ +M+ +
Sbjct: 690 RTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHL 749
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+ T+N L +G +G + EK + + G+ I ++N ++ ++ K G F M
Sbjct: 750 ANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGM-ADIISYNTIIAAHAKNGDFRSMIYF 808
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ MQ+ + ++ YN ++DA+G+AG L++ + + M + T ++ YG
Sbjct: 809 VQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGR 868
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E + +VL + + D +N L+ AYG + +++ M+ +G D+VT
Sbjct: 869 KGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVT 928
Query: 311 YRTMVRAYSTN 321
Y ++ A N
Sbjct: 929 YTNLIAALQRN 939
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 7/293 (2%)
Query: 9 EKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
E A +L MV D GC + Q+F L+ + L D L HM D QP+V+T
Sbjct: 244 EAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGTKWL-HMMLERDVQPNVSTVG 302
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + + + + M GI+ Y+ ++ Y R FA+ E + M ++
Sbjct: 303 MLMGLYQRIGNLPEAEFTFAKMRKCGIKCVN-AYSAMVTLYTRLGHFAKSEEVITLMNND 361
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ P++ L A+ G+++ E + GI ++ +N ++ YGK +K
Sbjct: 362 EVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKA 421
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V + ++ + TY +I+ FGRA KQ +R +R+ KP+ +++
Sbjct: 422 MEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINL 481
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
E +L + + ++ LV AYG + M VL++++
Sbjct: 482 LARHDDSEGATEILEDMRAAGCQCSSI-VTVLVRAYGSV---GRMHKVLQILK 530
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 12/303 (3%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N +++ L A ++ A LL M C D ++ LI C K D
Sbjct: 225 GNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGTK 284
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-----EDCEPDVWTMNCT 139
L M + ++PN T L+ Y R E E T KM + + T+
Sbjct: 285 WLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTR 344
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
L F S ++ T+ E + P++ + + L++Y + G E+ V++ +
Sbjct: 345 LGHFAKSEEVITLMNNDE------VVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGI 398
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +V YN VI +G+ D+++ +F ++S + P T S++ +G A K ++
Sbjct: 399 ALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAIL 458
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
R + NS + F +++ R +LE M+ GC+ + +VRAY
Sbjct: 459 YYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAYG 517
Query: 320 TNG 322
+ G
Sbjct: 518 SVG 520
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 115/271 (42%), Gaps = 2/271 (0%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTL 104
A E MK + + Y + +++ ++ LL +M + G + +N L
Sbjct: 210 ALGFFEWMKANGKLKGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGL 269
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
I + ++ L ML D +P+V T+ + + G + E + K + GI
Sbjct: 270 IYVCAKRRLVDWGTKWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI 329
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+ +N ++ ++ Y + GHF K V+ M + + + ++A+ + G +++ E
Sbjct: 330 K-CVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAEL 388
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ + + E I + V +++ YG +K V + ++ + D + +++ +G
Sbjct: 389 VLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFG 448
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
R + + ++ G KP+ + TM+
Sbjct: 449 RADKYKQAILYYRKLRNSGFKPNASNFYTMI 479
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 11/274 (4%)
Query: 47 FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLI 105
S + H + +C S+LI CL+ + M G ++ N Y+ +
Sbjct: 183 LSSVTHESSIEECN------SVLI--CLEKHSDKTALGFFEWMKANGKLKGNAEAYHLAL 234
Query: 106 DAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
A + + L +M+++ C D N + +D K +
Sbjct: 235 QAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGTKWLHMMLERDV 294
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
QP+++T +L+ Y + G+ + M+K + Y+ ++ + R G + E
Sbjct: 295 QPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIK-CVNAYSAMVTLYTRLGHFAKSEE 353
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ LM ++ + P+ + AY GK E+ VL+ + + I L+ V +N ++ YG
Sbjct: 354 VITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYG 413
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++ + V + ++ G PD+ TYR+M+ +
Sbjct: 414 KVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGF 447
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 151/366 (41%), Gaps = 44/366 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +KA E+F + G + ++ +++ +GR+ + +A ++N+ +P+
Sbjct: 413 GKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNS-GFKPN 471
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMEL-- 119
+ + +I + + +L DM G + +++ L+ AYG +M +++
Sbjct: 472 ASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAYGSVGRMHKVLQILK 530
Query: 120 ------------------------TLV----KMLSE------DCEPDVW-TMNCTLRAFG 144
+LV ++L E D E +++ + C+ +
Sbjct: 531 ACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCK--- 587
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G D + Y + + P++ + ++D + F A+ ++ ++
Sbjct: 588 EAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMI 647
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
Y++++ + +AG + + M ++ I P ++R Y G EKL +
Sbjct: 648 AYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYW 707
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
I S + LD +NC+++ GR E+ + + M Q+G + VT ++ Y G+
Sbjct: 708 ILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGL 767
Query: 324 KNHAKE 329
N A++
Sbjct: 768 FNKAEK 773
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 143/349 (40%), Gaps = 39/349 (11%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+++A+++ Y R G F K+ ++ M N + P++ + + + + + ++ + +L
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLM-NNDEVVPNMENWLVRLNAYCQQGKMEEAELVL 390
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ +GI N V YNT+I YG+ + ++ S PD T + FG +
Sbjct: 391 KSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRA 450
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVT 205
+ Y K +++G +P+ + F +++ + E + ++E M+ +IVT
Sbjct: 451 DKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIVT 510
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR--- 262
+++ A+G G + ++ + + ++I + LV + E+ VLR
Sbjct: 511 --VLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKK 568
Query: 263 -----FIDNSDIML-----------DTV----------------FFNCLVDAYGRLKCFA 290
F DN +L D V + ++D + ++ F
Sbjct: 569 WKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFT 628
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ + + ++ C D + Y +VR Y+ G A + +EK E
Sbjct: 629 DAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKE 677
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 7/339 (2%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
++G C K + A ++F M +GC N ++T L+ + D+A L MK+ +
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-E 318
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P V TY++LIKS + + L+ +M GI+PN TY LID+ F +
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +ML + P+V T N + + G I+ E +S + P+ T+N L+ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K+ + K V+ M + +VTYN +ID R+G+ L LM + P
Sbjct: 439 CKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T S++ + + + E+ + ++ + + V + L+D Y + E +LE
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M + C P+ +T+ ++ +G KE L EKM
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADG---KLKEATLLEEKM 593
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 5/332 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA EL M+++G N ++ AL++ Y + G+ + A ++E M++ P+ TY+
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNE 433
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LIK K+ K +L+ M + + P+ VTYN+LID R+ F L M
Sbjct: 434 LIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD WT + + S +++ ++ + G+ P++ + L+D Y KAG ++
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M + +T+N +I G LK+ L M ++P+ T L+
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + S + + +S D + + Y R + + ++ M++ G PD
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
TY ++++ Y G N A D++++M +T
Sbjct: 673 FTYSSLIKGYGDLGQTNFA---FDVLKRMRDT 701
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 150/324 (46%), Gaps = 2/324 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+++ M+++ N ++ +++ Y + G ++A + + PD TY+ LI
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMG 262
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + ++M +G R N V Y LI A+ E VKM ++C P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T +++ S + ++ + GI+P+I+T+ +L+DS FEK ++
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + ++TYN +I+ + + G ++ + LM S ++ P+ T L++ Y +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ +G + + ++ ++ D V +N L+D R F +L +M RG PD+ TY
Sbjct: 443 VHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEK 336
+M+ + + A + D +E+
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQ 525
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 57/371 (15%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++AH + + M+ + C N+ +F AL+ G +A +LLE Q
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQ 599
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V+T +ILI LK FD + M + G +P+ TY T I Y R + E
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF-----NILL 175
+ KM PD++T + ++ +G+ GQ + ++ + G +PS +TF ++L
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 176 DSYGKAG-------------HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
YGK F+ + ++E M ++ + +Y +I G+L+
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 223 EYLF-RLMRSERIKPS------CVTLCSLVRAYGHA------------------------ 251
E +F + R+E I PS ++ C ++ + A
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 252 -----GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ E+ SV + + D + + ++D G+ + VM++ GCK
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 307 DKVTYRTMVRA 317
TY ++
Sbjct: 900 SSQTYSLLIEG 910
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 104/235 (44%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
YNTL+++ R + EM+ ++ML + P+++T N + + G ++ + K
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
AG+ P T+ L+ Y + + V M V Y +I A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ LF M+ + P+ T L+++ + + + ++++ ++ + I + + L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
D+ F + + +L M ++G P+ +TY ++ Y GM A + +L+E
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 115/274 (41%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ Y+ L+ S + D+++ + +M + PN TYN +++ Y + E +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K++ +PD +T + + +D+ K + + G + + + L+ A
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + M+ T+ TY ++I + + + L + M IKP+ T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + K EK +L + +M + + +N L++ Y + + V+E+M+ R
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ TY +++ Y + + ++E+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 176 DSYGKAGHFEKMSAVMEYMQKYH--YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
DS G A + + M +++ Y I YN ++++ R G + +M+ ++ M ++
Sbjct: 154 DSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDK 213
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ P+ T +V Y G E+ + I + + D + L+ Y + K
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETCLAMKR 346
V M +GC+ ++V Y ++ + E DL KM D+ C R
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLC---VARRIDEAMDLFVKMKDDECFPTVR 324
>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 150/331 (45%), Gaps = 7/331 (2%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M D+G N +++T LL AY R+G + ++ +L M+ + D YS+L++
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRW-GIRLDTAGYSMLVRLYRDNG 207
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ K L+ +M G+ + Y+ LID +G+ A+ KM +E PD+ T N
Sbjct: 208 MWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWN 267
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++ G + + + Q G+ P F +++ G+ G ++++ + + M
Sbjct: 268 ALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNR 327
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ + Y I++D +G+ G + + +R+E + C + AY G E+
Sbjct: 328 GFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQT 387
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+VL+ ++ + V N L++A+G E V + ++ G PD VTY T+++
Sbjct: 388 VNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKT 447
Query: 318 YSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ AK+F+ + E E A PD
Sbjct: 448 FM------RAKKFEKVSEVYREMERAGCAPD 472
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 4/293 (1%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
++ LL M+ + +P + Y+ LI++ +A + +ALL +M G RP YN L
Sbjct: 71 RSLGLLADMQASGG-RPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNAL 129
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
++ A +L L++M + + T L A+ +G+++ + + GI
Sbjct: 130 LEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGI 189
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+ +++L+ Y G ++K + ++ MQ+ + Y+ +ID FG+ G L
Sbjct: 190 RLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARR 249
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+F MR+E ++P T +L++ + G ++ + + D F ++ G
Sbjct: 250 MFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLG 309
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ E+K + + M RG K Y +V Y G H ++ QD + +
Sbjct: 310 EQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYG---HFRDAQDCIAAL 359
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A F +M +EG + + F ++S G G +D+ L + M N + Y+I
Sbjct: 280 KRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNR-GFKESGAVYAI 338
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + F Q ++ + + + + + +AY + + + L M E
Sbjct: 339 LVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEEG 398
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP++ +N + AFG +G+ ++ + +G+ P + T+ L+ ++ +A FEK+S
Sbjct: 399 FEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVS 458
Query: 189 AVMEYMQK 196
V M++
Sbjct: 459 EVYREMER 466
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ +LF M + G + + L+ YG+ G F A + ++ + Q
Sbjct: 308 LGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALR-AENTQL 366
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ + + ++ +L M +G PN V N+LI+A+G A E
Sbjct: 367 LPRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVF 426
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ PDV T ++ F + + + + + Y + + AG P +L D+
Sbjct: 427 QHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCAPDRKAREMLHDA 482
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 175/386 (45%), Gaps = 45/386 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK ++ +LF+ + + + A +S SG + A+ + E M+ T +
Sbjct: 223 LLGKGGMGDEVMDLFRNLPSSNEFRDVHVYNATISGLLSSGRSEDAWKVYESME-TENIH 281
Query: 61 PDVNTYSILIK--------------------------------SCLKAFAFD--KVQALL 86
PD T SI++ + + +F + + QAL+
Sbjct: 282 PDHMTCSIMVTVMRELGHSAKDAWQFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALI 341
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
S+M +G+ + + YNTL+DA+ ++ E V+M ++ +P T N + A+
Sbjct: 342 IQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYS 401
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY--MQKYHYSWT 202
Q +EK E+ Q G++P+ ++ L+ +YGK + M+A + M+K T
Sbjct: 402 RRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPT 461
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+Y +I A+ +G ++ F M++E IKPS T +L+ A+ HAG + L + +
Sbjct: 462 SQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWK 521
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + FN LVD + + F E + V+ + G KP VTY ++ AY+ G
Sbjct: 522 LMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGG 581
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPD 348
H+K L + + E + +PD
Sbjct: 582 --QHSK----LPQLLKEMAVLKLKPD 601
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 147/310 (47%), Gaps = 3/310 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F+ M +G + + AL++++ GL +A + M+ + Y+ L+
Sbjct: 304 AWQFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAI-VYNTLM 362
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K+ + + L +M +GI+P TYN L+ AY R +E L +M +
Sbjct: 363 DAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQDVGLK 422
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKC--YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ + C + A+G + M + K + G++P+ ++ L+ +Y +G EK
Sbjct: 423 PNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAY 482
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A E MQ +I TY +++AF AGD + + +++LM SE+++ + T LV +
Sbjct: 483 AAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGF 542
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + V+ + V +N L++AY R +++ +L+ M KPD
Sbjct: 543 AKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMAVLKLKPDS 602
Query: 309 VTYRTMVRAY 318
VTY TM+ A+
Sbjct: 603 VTYSTMIFAF 612
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 3/299 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M +G ++ + L+ A+ +S + A L MK +P TY+IL+ + +
Sbjct: 346 MEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMK-AKGIKPIAATYNILMHAYSRRM 404
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT--LVKMLSEDCEPDVWT 135
V+ LL +M G++PN +Y LI AYG+ K ++M +KM +P +
Sbjct: 405 QPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQS 464
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
+ A+ SG + +E Q+ GI+PSI T+ LL+++ AG + + + + M
Sbjct: 465 YTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMI 524
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
T T+NI++D F + G + + +KP+ VT L+ AY G+
Sbjct: 525 SEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHS 584
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
KL +L+ + + D+V ++ ++ A+ R++ F + M + G D +Y+T+
Sbjct: 585 KLPQLLKEMAVLKLKPDSVTYSTMIFAFVRVRDFRRAFFYHKQMIKSGQMMDGGSYQTL 643
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K E A LF M +G ++ L+ AY R LLE M++ +P+
Sbjct: 367 KSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQDV-GLKPNA 425
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQ---------GIRPNTVTYNTLIDAYGRAKMF 114
+Y+ LI A+ K Q +SDM+ G++P + +Y LI AY + +
Sbjct: 426 TSYTCLI------IAYGK-QKNMSDMAAADAFLKMKKVGVKPTSQSYTALIHAYSVSGLH 478
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ M +E +P + T L AF ++G T+ + ++ S ++ + TFNIL
Sbjct: 479 EKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATFNIL 538
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+D + K G F + V+ K T+VTYN++I+A+ R G ++ L + M ++
Sbjct: 539 VDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMAVLKL 598
Query: 235 KPSCVTLCSLVRAY 248
KP VT +++ A+
Sbjct: 599 KPDSVTYSTMIFAF 612
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 138/317 (43%), Gaps = 38/317 (11%)
Query: 14 LFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
FQ M + E ++ T L G+ G+ D+ L ++ ++ + + DV+ Y+ I
Sbjct: 200 FFQWMSLQEPSLVTPRACTVLFPLLGKGGMGDEVMDLFRNLPSSNEFR-DVHVYNATISG 258
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
L + + + M T+ I P+ +T + ++ T+++ L + D
Sbjct: 259 LLSSGRSEDAWKVYESMETENIHPDHMTCSIMV--------------TVMRELGHSAK-D 303
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
W + +EK G++ S L++S+ G + +
Sbjct: 304 AW-------------------QFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQS 344
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K S + + YN ++DAF ++ ++ E LF M+++ IKP T L+ AY
Sbjct: 345 EMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRM 404
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG--VLEVMQQRGCKPDKVT 310
+P+ + +L + + + + + CL+ AYG+ K ++M M++ G KP +
Sbjct: 405 QPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQS 464
Query: 311 YRTMVRAYSTNGMKNHA 327
Y ++ AYS +G+ A
Sbjct: 465 YTALIHAYSVSGLHEKA 481
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L C Q EKA L + M G ++ + LL+AY ++GL + A +L+ HM
Sbjct: 802 LINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALI-HMARGDGIPL 860
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y+ +IK+ L+A K S ++ G+RP+ TY+T+I
Sbjct: 861 DIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISV-------------- 906
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
F SG+ EK ++ +SAG QP ++ +++ Y K+
Sbjct: 907 ---------------------FAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKS 945
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +E + + E M+ V+YN +IDA+ RAG + E L M PS VT
Sbjct: 946 GMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTF 1005
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ AY H GK + + L + + I +N ++ A+ R + ++ M++
Sbjct: 1006 LLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMER 1065
Query: 302 RGCKPDKVTYRTMVR 316
G +PD V+ RTM+R
Sbjct: 1066 SGIQPDVVSSRTMIR 1080
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 153/367 (41%), Gaps = 48/367 (13%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K E+A + F+ +V+ G A+ ++ +LS Y + + A L + +K++ QPD
Sbjct: 568 KAGNVERATKTFKTLVESGI-ADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSS-SIQPDQ 625
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA------------ 111
+ ++K A + +L M +G P+ +T LI+AYG A
Sbjct: 626 VWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEA 685
Query: 112 ---------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
++F + L L ++L E D N F +GQ+
Sbjct: 686 SAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVL-ESFTLDSAAYNQLTINFLKAGQVP 744
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
E + + Q G +T L+ +YGKAG +E ++ + + + ++ Y+ ++
Sbjct: 745 PAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPRNNF-----VYSSMV 799
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A L++ L MR +K V + L+ AY AG E +++ I
Sbjct: 800 GALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIP 859
Query: 271 LDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
LD V +N ++ A GRLK + L + G +P TY TM+ ++ +G A
Sbjct: 860 LDIVAYNTIIKADLRAGRLKKAIDTYSSLTNL---GLRPSLQTYDTMISVFAKSGRTRDA 916
Query: 328 -KEFQDL 333
K F+DL
Sbjct: 917 EKMFKDL 923
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 138/310 (44%), Gaps = 6/310 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E+F+AM+ G ++ + +L G+ G +D+A + M+ C +Y+
Sbjct: 398 EEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKY-SYAT 456
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ C KA F+ ++ SDM + + V Y ++I YG+A ++ E E +M
Sbjct: 457 MLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELR 516
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
DV T + +G+ + + E+ + G+ + LL Y KAG+ E+ +
Sbjct: 517 LLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERAT 576
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + + + ++ YN ++ + L+ + LF+ ++S I+P V ++V+ Y
Sbjct: 577 KTFKTLVESGIA-DLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLY 635
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+A VLR + D + L++AYG E G+LE K D+
Sbjct: 636 CNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEA----SAKEDE 691
Query: 309 VTYRTMVRAY 318
+ R Y
Sbjct: 692 SEAAAISRIY 701
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 8/310 (2%)
Query: 30 FTALLSAYGRS---GLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
++ LL YGR GL + AF + K PD +S +I + A FD++ +
Sbjct: 279 YSMLLKVYGRDKQIGLAEAAFQEMLDQK----LDPDEVAFSTMILNYANAEMFDEMLTMY 334
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M ++GI P++VTY T++ +A+ A+ L ++ E E + +
Sbjct: 335 EAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKL 394
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + + +E AG P +N++L GK G +++ V MQ+ + +Y
Sbjct: 395 GRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSY 454
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++ +A + +F M+ +R V S++ YG AG ++ + + ++
Sbjct: 455 ATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNE 514
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
+++D F+ + + + + E V+E + +G D ++T++ Y G ++
Sbjct: 515 LRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVER 574
Query: 326 HAKEFQDLVE 335
K F+ LVE
Sbjct: 575 ATKTFKTLVE 584
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 160/396 (40%), Gaps = 75/396 (18%)
Query: 1 MLGKCKQPEK---AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
ML C++ +K A +F M + C + +T+++S YG++GL+D+A L + M N
Sbjct: 457 MLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM-NEL 515
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA------ 111
DV T+S++ LKA +++ ++ ++ +G+ + + TL+ Y +A
Sbjct: 516 RLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERA 575
Query: 112 ----------------------------KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
M + +L ++ S +PD ++ +
Sbjct: 576 TKTFKTLVESGIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLY 635
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME----------- 192
N+ + E+ + + G P T IL+++YG+A E+ + ++E
Sbjct: 636 CNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAA 695
Query: 193 -------------------YMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ + S+T+ YN + F +AG + E L M+
Sbjct: 696 AISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQD 755
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ TL L+ AYG AG+ E L + ++ + ++ +V A +
Sbjct: 756 KGFDVEDSTLGHLIAAYGKAGRYEVLTKL-----KPELPRNNFVYSSMVGALINCNQLEK 810
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
G++E M+Q G K D V ++ AYS G+ A
Sbjct: 811 AAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDA 846
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 136/362 (37%), Gaps = 37/362 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ KQ A FQ M+D+ D + +F+ ++ Y + +FD+ ++ E M + P
Sbjct: 287 GRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSR-GIVPS 345
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ ++ KA L D+ + + + + Y +I Y + F E
Sbjct: 346 SVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFE 405
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
ML PD N L G G+ D + Q + S ++ +L KA
Sbjct: 406 AMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKAD 465
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
FE +++ MQ V Y VI +G+AG + E LF+ M R+ T
Sbjct: 466 KFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFS 525
Query: 243 -----------------------------------SLVRAYGHAGKPEKLGSVLRFIDNS 267
+L+ Y AG E+ + + S
Sbjct: 526 VMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVES 585
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I D + +N ++ Y + K + + ++ +PD+V + TMV+ Y M A
Sbjct: 586 GIA-DLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAA 644
Query: 328 KE 329
+E
Sbjct: 645 EE 646
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + + ++ + G + Q++ ++S + +SG A + + +K+ QPD YS
Sbjct: 879 KKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSA-GFQPDEKVYSQ 937
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ K+ ++ L M +G+RP+ V+YN LIDAY RA FA+ E LV+M
Sbjct: 938 MMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG 997
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS--------------------------- 161
C P T + A+ + G+ + E E+ Q+
Sbjct: 998 CPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAM 1057
Query: 162 --------AGIQPSINTFNILLDSYGKAGHFEK 186
+GIQP + + ++ + FE+
Sbjct: 1058 ESYLKMERSGIQPDVVSSRTMIRILLEGSMFEE 1090
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 4/285 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V YS+L+K + +A +M Q + P+ V ++T+I Y A+MF EM
Sbjct: 274 PSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTM 333
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+S P T L + ++ +E ++ S + +++ Y K
Sbjct: 334 YEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRK 393
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE+ V E M Y + YN+V+ G+ G + +F M+ + + S +
Sbjct: 394 LGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYS 453
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A K E S+ + +D V + ++ YG+ + E + + + M
Sbjct: 454 YATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMN 513
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK---MDETC 341
+ D T+ M G N A + ++L+ K +D+T
Sbjct: 514 ELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTA 558
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +LF+AM G + S+ L+ AY R+G F KA LL M C P T+ +
Sbjct: 949 EHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKA-GCPPSSVTFLL 1007
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ + L M T IRP YN ++ A+ RA++ ++ + +KM
Sbjct: 1008 LISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSG 1067
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PDV + +R + Y+K ++ + S++ + G HFE
Sbjct: 1068 IQPDVVSSRTMIRILLEGSMFEEGLSLYKKTEAKLVSDSLSREMVAKLYQGAGKHFE 1124
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 37/327 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + +KA ELF M GC + ++ L++ + R D+ LL+ + + D
Sbjct: 246 GLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLS 305
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ +I K +K L ++M + GI+PN T+N LI+ +G+ E
Sbjct: 306 PDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENM 365
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML C PD+ T + +G+++ K + + + + P+ TF IL ++ K
Sbjct: 366 YEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCK 425
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + ++ H YN VID F +AG++ + + M +R KP +T
Sbjct: 426 ENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKIT 485
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GH K GRL +E + M
Sbjct: 486 YTILI--IGHCMK------------------------------GRL---SEAISIFNRML 510
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
GC PD +T +++ GM N A
Sbjct: 511 GTGCAPDSITMTSLISCLLKAGMPNEA 537
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +++ILI+ + DK L ++M G P+ +TYNTLI+ + R L
Sbjct: 236 DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL 295
Query: 122 VKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++LS+ D PDV T + + G+++ + S+GI+P+ TFNIL++ +GK
Sbjct: 296 KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGK 355
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + E M I+T+ +ID R G +++ L+ + + + P+ T
Sbjct: 356 VGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYT 415
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L A + + LR + I+ +N ++D + + E +L M+
Sbjct: 416 FAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEME 475
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ CKPDK+TY ++ + G + A
Sbjct: 476 EKRCKPDKITYTILIIGHCMKGRLSEA 502
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 47/376 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K ++++ M +G + ++ LL A ++G+ D+AF + E MK C PD
Sbjct: 198 RSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQK-HCVPDA 256
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ KA K + +M ++G N + +NT+I+A G+ KM ++ L K
Sbjct: 257 YTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSK 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
M+ DC+P+ +T + TL GQ+ + + + +F + I ++ L+ S K
Sbjct: 317 MVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCK 370
Query: 181 AGHFEKMSAVMEYMQKYHYSWT-------------------------------IVT---- 205
+GH + V M H IVT
Sbjct: 371 SGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGM 430
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN+V A G+ + + LF M++ I P T ++ +YG G +K + ++
Sbjct: 431 YNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVME 490
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
S D V +N L++ G+ E + + MQ++G PD TY ++ + +
Sbjct: 491 ASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVE 550
Query: 326 HAKEFQDLVEKMDETC 341
A D E + E C
Sbjct: 551 MACSLFD--EMISEGC 564
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + K F MV +GC N +F ++ A G++ + DK +L M DCQ
Sbjct: 265 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQ 323
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYSI L+KS K+ + +
Sbjct: 324 PNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCR 383
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + + ++++ A+ E L M + DV N A G Q
Sbjct: 384 MWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQ 443
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + ++K ++ GI P + T+NI++ SYG+ G +K S + E M+ +VTYN
Sbjct: 444 VSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNS 503
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T L+ +G + K E S+ + +
Sbjct: 504 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 563
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ V +N L+D R E + E M+Q+G PD +TY + R S
Sbjct: 564 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLES 614
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 32/303 (10%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++++ L++ K + +M +G + + YN L+DA +A M + M
Sbjct: 188 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 247
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C PD +T +R G +G+ +++ S G ++ FN ++++ GK
Sbjct: 248 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 307
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM--------EYLFRLMRSERIKP 236
+K+ V+ M + TY+I +D G L ++ ++ R + S +K
Sbjct: 308 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKS 367
Query: 237 SCVT------------------------LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
C + S++ +A K + +L + I+ D
Sbjct: 368 LCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTD 427
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N + A G+LK + + + + M+ G PD TY M+ +Y G+ + A E +
Sbjct: 428 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFE 487
Query: 333 LVE 335
++E
Sbjct: 488 VME 490
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDT 151
G R + +YN ++ R + L LV + D ++ T+N + G
Sbjct: 113 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGM---GGGGVE 169
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
ME+C E G++ S T+ ++ ++ ++ K V E M++ Y I YN+++D
Sbjct: 170 MERCLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLD 229
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A +AG + Q +F M+ + P T L+R G AG+ K S + + +L
Sbjct: 230 ALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVL 289
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ + FN +++A G+ K ++ VL M + C+P++ TY + +T G + E
Sbjct: 290 NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVL 349
Query: 332 DLVEK 336
D+ +
Sbjct: 350 DICSR 354
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G+R + TY ++ A+ R++ ++ +M + + D++ N L A +G +
Sbjct: 178 SKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMV 237
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D + +E + P T+ IL+ GKAG K + + M ++ +N +
Sbjct: 238 DQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 297
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL----RFID 265
I+A G+ + ++ ++ M +P+ T + G+ +L VL RF++
Sbjct: 298 IEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 357
Query: 266 NS 267
S
Sbjct: 358 RS 359
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 155/322 (48%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A + + M +G + S TAL+ AYGR+ + KA ++ M+ T +P
Sbjct: 153 GKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQ-TSGPEPS 211
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++KS ++ + + +A+ D+ + +P+ ++ +I Y +A +A+
Sbjct: 212 AVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARK 271
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M T N + + ++ + Y++ Q ++P + ++++L+ +YG
Sbjct: 272 LFAQMSERGIPLSTVTFNSLMSFETDYKEVSNI---YDQMQRTALKPDVVSYSLLIKAYG 328
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T +YNI+IDAF +G +++ +F+ MR R++P
Sbjct: 329 KARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLC 388
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++V AY +A + R I + + V + L+ Y +L + V E M
Sbjct: 389 SYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERM 448
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ +G +P++ Y T++ + N
Sbjct: 449 RMQGVEPNQTIYTTIMDVHGRN 470
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 154/312 (49%), Gaps = 13/312 (4%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC--Q 60
G+ KQ KA +F+ M G + + ++ +L ++ + +A ++ E + N +
Sbjct: 188 GRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFK 247
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----DAYGRAKMFAE 116
PD + ++I KA + + + L + MS +GI +TVT+N+L+ D + ++ +
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSNIYDQ 307
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M+ T +K PDV + + ++A+G + + + +E+ AG++P+ ++NIL+D
Sbjct: 308 MQRTALK-------PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILID 360
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ +G E+ V + M+++ + +Y ++ A+ A D+ E FR ++ + +KP
Sbjct: 361 AFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKP 420
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ V +L++ Y E++ V + + + + ++D +GR F
Sbjct: 421 NVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWF 480
Query: 297 EVMQQRGCKPDK 308
+ M+ RG DK
Sbjct: 481 KEMEARGYPADK 492
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ + K F + + +L M+ +G +P+ ++ L++AYGRAK + + E +M +
Sbjct: 147 MLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTS 206
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
EP T L++F + E +E + A +P F++++ Y KAG +
Sbjct: 207 GPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDY 266
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + M + + VT+N ++ D K++ ++ M+ +KP V+ L
Sbjct: 267 AQARKLFAQMSERGIPLSTVTFNSLMSF---ETDYKEVSNIYDQMQRTALKPDVVSYSLL 323
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++AYG A + E+ +V + ++ + +N L+DA+ E V + M++
Sbjct: 324 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRV 383
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
+PD +Y TMV AY + A++F
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKF 409
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K +A +LF M + G +T +F +L+S + + ++ + M+ T +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF---ETDYKEVSNIYDQMQRTA-LK 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +YS+LIK+ KA ++ A+ +M G+RP +YN LIDA+ + + E
Sbjct: 315 PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTV 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M EPD+ + + A+ N+ +D EK + + + G++P++ + L+ Y K
Sbjct: 375 FKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSK 434
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ E++ V E M+ Y ++D GR D F+ M +
Sbjct: 435 LNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEA 485
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G F + V++YM K Y ++++ +++A+GRA ++ E +FR M+
Sbjct: 145 FLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQ 204
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLK 287
+ +PS VT +++++ K ++ ++ + N + D F+ ++ Y +
Sbjct: 205 TSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAG 264
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+A+ + + M +RG VT+ +++ ++ T+ KE ++ ++M T L +P
Sbjct: 265 DYAQARKLFAQMSERGIPLSTVTFNSLM-SFETD-----YKEVSNIYDQMQRTAL---KP 315
Query: 348 D 348
D
Sbjct: 316 D 316
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 187 MSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+S ++E+++ H+ +++ + + +++ A+G+ GD + E + + M + KPS ++ +L+
Sbjct: 125 VSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALM 184
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE--VMQQRG 303
AYG A + K +V R + S V + ++ ++ + E + + E + ++R
Sbjct: 185 EAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRA 244
Query: 304 C-KPDKVTYRTMVRAYSTNG 322
KPD+ + M+ Y G
Sbjct: 245 SFKPDQKMFHMMIYMYKKAG 264
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+ +M G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S I +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSDVIAIVLNAY 361
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGIEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 240 KLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 303 GC 304
GC
Sbjct: 381 GC 382
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +A +F M G N ++TAL+ Y G +K F+L E M+ +
Sbjct: 47 GCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG-GVE 105
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+ LI + F++ ++L +M +GI N V+YNTLI R +
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL 165
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M +E P + T N + +G +G++ + + ++AG QPS T+N+L+ + +
Sbjct: 166 LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR 225
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + + M++ T VTY I+ID+F R + + + M ++ T
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHT 285
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KCFAEMKGVLEVM 299
LVRA G + + + + + V ++ ++ YGR + +K ++E M
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME-M 344
Query: 300 QQRGCKPDKVTYRTMVR 316
+Q+G P+ +Y +R
Sbjct: 345 RQKGLIPNSASYGLTIR 361
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 9/302 (2%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+G A ++L + D DV + L+ C K + + + +M G+ PN V
Sbjct: 15 AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74
Query: 100 TYNTLIDAY----GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
TY L+ Y R K FA E +M EP+++T NC + + +G+ +
Sbjct: 75 TYTALMHGYFTHGQREKGFALFE----EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSL 130
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+++ GI ++ ++N L+ + G + +++ M+ +I+T+N+++D +G+
Sbjct: 131 FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGK 190
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AG + F M++ +PS VT L+ + A + L + + V
Sbjct: 191 AGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVT 250
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ L+D++ R + +L M++ G + D TY +VRA G MK+ K FQ +
Sbjct: 251 YTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMG 310
Query: 335 EK 336
EK
Sbjct: 311 EK 312
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LFQ+M ++G + + + ++ YGR G KA L+ M+ P+ +Y + I
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK-GLIPNSASYGLTI 360
Query: 71 KSCLKAFAFDKVQALLSDMST 91
+ K + +ALL DM T
Sbjct: 361 RVLCKDDKCQEAEALLDDMET 381
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+S+M T G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + ++ + +D + F ++
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVX 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I + RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXYERAGLIAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K +A + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSNVIAVVLNAY 361
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 138/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ Y G+ HAK +KRPD
Sbjct: 244 TGVEIDQILFQTMIVXYERAGLIAHAKRLLH----------ELKRPD 280
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + + +G I ++ + + P +IL AG
Sbjct: 240 KLRSTGVEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYANVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQEFDKANDVYMEMQEV 380
Query: 303 G 303
G
Sbjct: 381 G 381
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M G N ++ AL+ YGR+G + ++++ M + PD YS
Sbjct: 110 ELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEM-SRDGFGPDSFVYSK 168
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K ++ ++ G+ + YN++ID +G+ +E KM E
Sbjct: 169 VIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEG 228
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T N ++ +G + + + K Q G+ P F ++ G+ G ++ +
Sbjct: 229 VKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIK 288
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E M+ + + Y I++D +G+ G + E ++SE I+PS C L AY
Sbjct: 289 RNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAY 348
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G E+ VL+ ++ I + + N L++A+G E V ++ G PD
Sbjct: 349 AQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDV 408
Query: 309 VTYRTMVRA 317
VTY T+++A
Sbjct: 409 VTYSTLMKA 417
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 5/237 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GKC + +A E+F+ M +EG + ++ +L+ + ++G KA L M+ P
Sbjct: 208 FGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQE-EGLYP 266
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + +I + +D ++ +M +G + + Y L+D YG+ F E +
Sbjct: 267 DPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECI 326
Query: 122 VKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ SE +P +M C L A+ G + K + ++ GI+P++ N+L++++G
Sbjct: 327 SALKSEGIQPSA-SMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGI 385
Query: 181 AG-HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
AG H E +S V +++ S +VTY+ ++ A RA ++ ++ M S P
Sbjct: 386 AGRHLEALS-VYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTP 441
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 35/293 (11%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ I+ + DK LL+ M G + +Y T+I+A G E E +M
Sbjct: 25 VYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREM 84
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ + D+ N LR+ G ++ +K + + GI + T+ L+D YG+AG
Sbjct: 85 VHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRL 144
Query: 185 EKMSAVMEYMQK-------YHYSWTIVT----------------------------YNIV 209
+ AV+ M + + YS I YN +
Sbjct: 145 NDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSI 204
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
ID FG+ G+L + +F M+ E +KP +T SL++ + AG K + + +
Sbjct: 205 IDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGL 264
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
D F ++ G + +K E M+ RG + Y +V Y G
Sbjct: 265 YPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYG 317
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%)
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+N + + G +K ++ M+ +S ++ +Y VI+A G G + E +FR M
Sbjct: 25 VYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREM 84
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+K ++R+ G E VL +D I + + LVD YGR
Sbjct: 85 VHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRL 144
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ V+ M + G PD Y ++ Y NGM A E + +M
Sbjct: 145 NDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREM 192
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N +R G +D K + ++ G S+ ++ ++++ G G + A+ M
Sbjct: 27 NARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVH 86
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+ YN+++ + R G L+ + + M + I + T +LV YG AG+
Sbjct: 87 LGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLND 146
Query: 257 LGSVL-----------------------------------RFIDNSDIMLDTVFFNCLVD 281
+ +V+ R I + LD +N ++D
Sbjct: 147 VWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIID 206
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+G+ +E V E MQ+ G KPD +T+ ++++ + G A E L KM E
Sbjct: 207 TFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALE---LFSKMQEEG 263
Query: 342 L 342
L
Sbjct: 264 L 264
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A L ++M +G N ++A +SA + G ++ A LL+ M PDV
Sbjct: 233 KVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAV-GLAPDV 291
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I +C K ++ LL +M T+G+ N +TY+ +I A + + E L +
Sbjct: 292 ITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLRE 351
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PDV T + T+ A GQ + + G+ P+ ++ I++ + K G
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGR 411
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + +++ MQ + ++ Y+ IDA +A +Q +L R M + + P+ ++ S
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ A G+ + +LR + + D + ++ ++ + + + E + MQ++G
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
PD V+ T + A + G A
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEA 555
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 155/323 (47%), Gaps = 5/323 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNTYS 67
KA ++ M ++G ++Q++++ ++A G + +++A LL M + TP PDV TYS
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTP---PDVLTYS 225
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
I +C K + + LL M QG++PN + Y+ I A + + L +M +
Sbjct: 226 SAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAV 285
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PDV T + + A GQ + + + + G+ +I T++I++ + K G +E+
Sbjct: 286 GLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEA 345
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A++ MQ+ + ++TY+ I A + G ++ L R M E + P+ ++ ++ A
Sbjct: 346 VALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISA 405
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G+ + +L+ + + D + ++ +DA + + + +L M G P+
Sbjct: 406 CAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPN 465
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
++Y + + A + G A E
Sbjct: 466 VISYNSAIDACAKTGRSKIAVEL 488
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 1/324 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A L M +G AN +++ ++ A + G +++A +LL M+ PDV
Sbjct: 303 KRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQEN-GVAPDV 361
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS I +C K +++ LL +M +G+ PN ++Y +I A + + E L +
Sbjct: 362 ITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQE 421
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + PDV + + A + + + + + G+ P++ ++N +D+ K G
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGR 481
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++ M + + ++TY+ VI + ++ LFR M+ + I P V+ +
Sbjct: 482 SKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNT 541
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ A G E+ VL + ++ D + + +DA + + E+ +L M G
Sbjct: 542 AINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVG 601
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
PD ++YR + A S +G+ A
Sbjct: 602 LTPDAISYRFAMSACSVDGLWKEA 625
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 41 GLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT 100
G + KA +L+ M+ +PD YS I +C A +++ LL+ M+ +G P+ +T
Sbjct: 165 GDWRKALDVLDRMQEQ-GVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLT 223
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
Y++ I A + + E L M + +P+V + + A GQ +T ++
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMP 283
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+ G+ P + T++ ++D+ K G +E ++ M I+TY+IVI A + G +
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWE 343
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ L R M+ + P +T S + A G+ E+ +LR + + + + + ++
Sbjct: 344 EAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVI 403
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
A + + E +L+ MQ G PD + Y + A
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDA 440
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 1/316 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L Q M G + +++A + A ++ +++A LL M T P+V +Y+
Sbjct: 414 EAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT-GLTPNVISYNSA 472
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +C K LL +M G+ P+ +TY+ +I + + + E +M +
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV + N + A G + + + G+ P ++ +D+ K ++++
Sbjct: 533 TPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIID 592
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M + ++Y + A G K+ L R M + + P VT S + A
Sbjct: 593 LLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACA 652
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ ++ +LR + + D FN +DA G + VL M+ G P++
Sbjct: 653 KGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEA 712
Query: 310 TYRTMVRAYSTNGMKN 325
TY T + A G K+
Sbjct: 713 TYLTAMYACKRCGEKD 728
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 90/214 (42%), Gaps = 6/214 (2%)
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
+ TLR G ++ Q G++P ++ + + G A +E+ ++ M
Sbjct: 154 LKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMA 213
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
++TY+ I A + K+ L R M+ + +KP+ + + + A G+ E
Sbjct: 214 ARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWE 273
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+L+ + + D + ++ ++DA + + +L M +G + +TY ++
Sbjct: 274 TAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVI 333
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
A + G +E L+ +M E +A PD
Sbjct: 334 GACAKWG---QWEEAVALLREMQENGVA---PDV 361
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +A +F M G N ++TAL+ Y G +K F+L E M+ +
Sbjct: 47 GCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG-GVE 105
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+ LI + F++ ++L +M +GI N V+YNTLI R +
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL 165
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M +E P + T N + +G +G++ + + ++AG QPS T+N+L+ + +
Sbjct: 166 LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR 225
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + + M++ T VTY I+ID+F R + + + M ++ T
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHT 285
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KCFAEMKGVLEVM 299
LVRA G + + + + + V ++ ++ YGR + +K ++E M
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME-M 344
Query: 300 QQRGCKPDKVTYRTMVR 316
+Q+G P+ +Y +R
Sbjct: 345 RQKGLIPNSASYGLTIR 361
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 9/302 (2%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+G A ++L + D DV + L+ C K + + + +M G+ PN V
Sbjct: 15 AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74
Query: 100 TYNTLIDAY----GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
TY L+ Y R K FA E +M EP+++T NC + + +G+ +
Sbjct: 75 TYTALMHGYFTHGQREKGFALFE----EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSL 130
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+++ GI ++ ++N L+ + G + +++ M+ +I+T+N+++D +G+
Sbjct: 131 FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGK 190
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AG + F M++ +PS VT L+ + A + L + + V
Sbjct: 191 AGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVT 250
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ L+D++ R + +L M++ G + D TY +VRA G MK+ K FQ +
Sbjct: 251 YTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMG 310
Query: 335 EK 336
EK
Sbjct: 311 EK 312
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LFQ+M ++G + + + ++ YGR G KA L+ M+ P+ +Y + I
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK-GLIPNSASYGLTI 360
Query: 71 KSCLKAFAFDKVQALLSDMST 91
+ K + +ALL DM T
Sbjct: 361 RVLCKDDKCQEAEALLDDMET 381
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 157/321 (48%), Gaps = 13/321 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLS 87
+++ L++ +G+ GLFD A S L+ M+ D P D+ YS LI+ K + K ++ S
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQ--DRVPGDLVLYSNLIELSRKLCDYSKAISIFS 68
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ G P+ V YN++I+ + +AK+F E + +M + PD + L +
Sbjct: 69 RLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENK 128
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + + + + T NI++D YG+ G ++ + M+K +V+YN
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ +G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + N
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I +++ ++ ++ + ++ + + ++ G + D+V Y+TM+ AY G+ HA
Sbjct: 249 GIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
K +KRPD
Sbjct: 309 KRL----------LHELKRPD 319
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 153/341 (44%), Gaps = 11/341 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K +A L M G +T S+T LL+ + + F +A S+ M+ C D+
Sbjct: 91 KAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIK-CLLDL 149
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 150 TTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 209
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ + K G
Sbjct: 210 MQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGK 269
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + + + ++ V Y +I A+ RAG + + L ++ +P + +
Sbjct: 270 LDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDT 325
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ AG+ E+ V R ++ + D F L+ + + K ++ + V + M++R
Sbjct: 326 AIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERR 385
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV--EKMDETCL 342
PD ++ AY K H E + V E DE C+
Sbjct: 386 YFPDSNVIALVLNAYG----KLHEFEKANSVYMEMQDEGCI 422
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 38/279 (13%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-------------------CE-- 130
+ + P+ TY+TLI +G+ +F + L+ ++ + +D C+
Sbjct: 3 RALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 131 ---------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
PD+ N + F + + ++AG+ P ++ LL
Sbjct: 62 KAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLL 121
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ + F + +V M++ + T NI+ID +G+ G K+ + LF MR I+
Sbjct: 122 TMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIE 181
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ V+ +L+R YG A + + R + +I + V +N ++ YG+ + +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ MQ RG +P+ +TY T++ + G + A FQ L
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKL 280
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 5/258 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 160 GQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 218
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I + + +
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQ 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ + E D + A+ +G + ++ + + P +IL AG
Sbjct: 279 KLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AAAG 334
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + +I F + + +F MR R P +
Sbjct: 335 RLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIA 394
Query: 243 SLVRAYGHAGKPEKLGSV 260
++ AYG + EK SV
Sbjct: 395 LVLNAYGKLHEFEKANSV 412
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M + G + N+ +++ ++S + + G D+A L + ++N+ + D
Sbjct: 230 GKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNS-GVEID 288
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y +I + +A + LL ++ RP+ + +T I A E
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAAAGRLEEATWVFR 344
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + D+ + F + + + ++K + P N ++L++YGK
Sbjct: 345 QAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLH 404
Query: 183 HFEKMSAVMEYMQ 195
FEK ++V MQ
Sbjct: 405 EFEKANSVYMEMQ 417
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 37/352 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + A LF++ EG SF+A++SAYGR+G F A L M+ + P
Sbjct: 188 LGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMR-SWGVYP 246
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ +Y+ LI + K FD V +M +GI P+ +TYN+L+ M+ +
Sbjct: 247 NLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKL 306
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS--- 177
L +M + D +T N L GQID + E+ S + P++ T++ ++D
Sbjct: 307 LSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAK 366
Query: 178 --------------------------------YGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Y K G F++ + M+ +VT
Sbjct: 367 ANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVT 426
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN ++ +GR G ++ LF M++ I P+ +T +++ Y G ++ V +
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFK 486
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + +D VF+ ++D+ + +L M ++G KP+ VT+ +++ A
Sbjct: 487 KAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 23/268 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+CK+ E G + ++ ALLS YGR G++D+ L E MK + P
Sbjct: 409 IGQCKEMESC----------GMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMK-AWNIYP 457
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYS +I K F + + D + + V Y ++ID+ + + + L
Sbjct: 458 NTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLL 517
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ M+ + +P+V T N + A S Q T+E A P+ ++L+D
Sbjct: 518 IAMIEKGIKPNVVTFNSIIDA---SRQSPTLEYGVHGSSQAVEYPTEQLSSMLID----- 569
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F+ + ++ + + D GR D + +LF+ M IKP+ VT
Sbjct: 570 GAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQ-DQHCILWLFQKMHELNIKPNVVTF 628
Query: 242 CSLVRAYGHAGKPEK---LGSVLRFIDN 266
+++ A E L LR DN
Sbjct: 629 SAILNACSRCNSFEDASMLLGALRLFDN 656
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 41/227 (18%)
Query: 130 EPDVWTMN---CTLRAFGNSGQIDTMEKCYE----------------------------- 157
E ++W + L+ FGN+G KC++
Sbjct: 135 ESELWEVEDYIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEI 194
Query: 158 -----KFQSAGIQPSINT---FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
F+SA ++ NT F+ ++ +YG+ GHF + M+ + +++YN +
Sbjct: 195 NHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSL 254
Query: 210 IDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
IDA + D + F M +E I P +T SL+ G E +L +D
Sbjct: 255 IDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKG 314
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
I+ D +N +D + + VLE M R P VTY TM+
Sbjct: 315 IVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMI 361
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 41/372 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + EKA E+ Q M+++G + ++Q+++ L+ + R +AF LL+ MK
Sbjct: 355 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR-KLA 413
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN----------------------- 97
P V TYS++I + A+L +M G++PN
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473
Query: 98 ------------TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
YN+LI + +AK E L++ML P+ T + +
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+++ ++ + + S G+ P++ + L++ + K G+ + +V ++ + T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+++I R G + + +F ++ + + P+ T SL+ G +K +L +
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I D V +N L+D + K + + ++ RG P+ VTY MV Y + KN
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS--KN 711
Query: 326 HAKEFQDLVEKM 337
FQ L+E+M
Sbjct: 712 PTAAFQ-LLEEM 722
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 7/341 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + MV G +AN + LL+ ++G +KA +++ M +PD TYS+
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK-GVEPDSQTYSL 386
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ + + LL +M + + P +TY+ +I+ R L +M+
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ + A G+++ E+ + GI P + +N L+ + KA E+
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + TY ID + +AG+++ + F M S + P+ +L+ +
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 566
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + SV RFI + ++ D ++ L+ R E G+ +Q++G P+
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
TY +++ G + A + ++E C+ PD
Sbjct: 627 FTYNSLISGSCKQGNVDKASQL------LEEMCIKGINPDI 661
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 14/337 (4%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ +A +F+ ++ + Q+++ L+ R+G +AF + ++
Sbjct: 565 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK-GLL 623
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY+ LI K DK LL +M +GI P+ VTYN LID +A E+
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG-----EIE 678
Query: 121 LVKMLSEDCEPDVWTMNCTLRA-----FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
K L +D E T NC A + S + E+ G+ P +N++L
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ K FEK + + M + ++ T V++N +I+ + ++G L++ +L M ++
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT SL+ AG + + + ++M + L+ Y + +E+ +
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
E M +G +PDK+TY M+ AY G A + +D
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 894
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 76/401 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C + + + + MV G N +T L++A+ + G +++ +LE M+ P
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ-GILP 484
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT- 120
DV Y+ LI KA ++ + L +M + +RPN TY ID Y +A EME+
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA---GEMEIAD 541
Query: 121 --------------------LVK-----------------MLSEDCEPDVWTMNCTLRAF 143
L++ +LS DV T + +
Sbjct: 542 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 601
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+G++ + + Q G+ P+ T+N L+ K G+ +K S ++E M + I
Sbjct: 602 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 661
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR- 262
VTYNI+ID +AG++++ + LF + + P+CVT ++V Y + P +L
Sbjct: 662 VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721
Query: 263 ----------FIDNSDI------------------MLD-----TVFFNCLVDAYGRLKCF 289
FI N + ML+ TV FN L++ Y +
Sbjct: 722 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKL 781
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
E +LE M ++ P+ VTY +++ GM AK
Sbjct: 782 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 61 PDVNTYS-----------------ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT 103
PDV TY+ +L++ KA D+ L M +G+ P+ TY+
Sbjct: 222 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDI 281
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
LI+ + K E +L L++M+ +P+ T N + F G I+ + ++ + G
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVME------------------------------- 192
I+ ++ +N LL+ KAG EK +M+
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401
Query: 193 ----YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M+K + T++TY+++I+ R G+L+ + R M +KP+ V +L+ A+
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+ +L + I+ D +N L+ + + K E + L M +R +P+
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 309 VTYRTMVRAYSTNG 322
TY + YS G
Sbjct: 522 HTYGAFIDGYSKAG 535
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 47/304 (15%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK + E+A LF + G N ++ A++ Y +S AF LLE M + P
Sbjct: 670 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP- 728
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR----------------------- 95
PD Y++++ C K F+K L +M +G
Sbjct: 729 --PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786
Query: 96 -----------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
PN VTY +LID +A M E + ++M + P T L +
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM------QKYH 198
N G + + +E+ + GI+P T+ +++D+Y + G+ + + + + K
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSG 906
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ + T +++ F AG++ + + R M + +L LV + E
Sbjct: 907 FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 966
Query: 259 SVLR 262
++L+
Sbjct: 967 NLLK 970
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 117/268 (43%), Gaps = 26/268 (9%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN+V ++ L+D+Y + E + + + P + + N L +++ K
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM--------QKYHYSWTIV--- 204
++ + + P + T+ ++ ++ K G+ + V+ M + ++V
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 205 ------TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
TY+I+I+ F ++ + + M +KP +T +L+ + G E+
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTMV 315
+ + I + + +N L++ + +M+ LE+MQ+ +G +PD TY ++
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKA---GKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ +N A+ F+ L+++M + LA
Sbjct: 389 EGHCRG--QNMARAFE-LLDEMKKRKLA 413
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +A +F M G N ++TAL+ Y G +K F+L E M+ +
Sbjct: 47 GCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG-GVE 105
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+ LI + F++ ++L +M +GI N V+YNTLI R +
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL 165
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M +E P + T N + +G +G++ + + ++AG QPS T+N+L+ + +
Sbjct: 166 LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR 225
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + + M++ T VTY I+ID+F R + + + M ++ T
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHT 285
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KCFAEMKGVLEVM 299
LVRA G + + + + + V ++ ++ YGR + +K ++E M
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME-M 344
Query: 300 QQRGCKPDKVTYRTMVR 316
+Q+G P+ +Y +R
Sbjct: 345 RQKGLIPNSASYGLTIR 361
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 9/302 (2%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+G A ++L + D DV + L+ C K + + + +M G+ PN V
Sbjct: 15 AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74
Query: 100 TYNTLIDAY----GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
TY L+ Y R K FA E +M EP+++T NC + + +G+ +
Sbjct: 75 TYTALMHGYFTHGQREKGFALFE----EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSL 130
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+++ GI ++ ++N L+ + G + +++ M+ +I+T+N+++D +G+
Sbjct: 131 FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGK 190
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AG + F M++ +PS VT L+ + A + L + + V
Sbjct: 191 AGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVT 250
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ L+D++ R + +L M++ G + D TY +VRA G MK+ K FQ +
Sbjct: 251 YTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMG 310
Query: 335 EK 336
EK
Sbjct: 311 EK 312
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 158/337 (46%), Gaps = 11/337 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K E+++ M +G + ++ LL A ++G+ D+A+ + E MK C PD
Sbjct: 198 RSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQK-YCVPDA 256
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ K K + +M ++G N + YNT+I+A G+ KM ++ L K
Sbjct: 257 YTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSK 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY---EKFQSAGIQPSINTFNILLDSYGK 180
M+ DC+P+ +T + TL GQ+ + + +++ + I ++ L+ S K
Sbjct: 317 MIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSI------YSYLVKSLCK 370
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+GH + V M H S + +++ +G + L +M + I
Sbjct: 371 SGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGM 430
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ A G + + ++ + S I D +N ++ +YGR+ + G+ E M+
Sbjct: 431 YNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEME 490
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDLVEK 336
CKPD +TY T++ NG + A F+++ EK
Sbjct: 491 ASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEK 527
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 150/351 (42%), Gaps = 33/351 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK Q K F MV GC N ++ ++ A G++ + DK +L M + DCQ
Sbjct: 265 MSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIES-DCQ 323
Query: 61 PDVNTYSI--------------------------------LIKSCLKAFAFDKVQALLSD 88
P+ TYS+ L+KS K+ + +
Sbjct: 324 PNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCR 383
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + + ++++ + E L M + + D+ N A G Q
Sbjct: 384 MWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQ 443
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + ++K +++GI P + T+NI++ SYG+ G +K S + E M+ ++TYN
Sbjct: 444 VSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNT 503
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + LF+ M+ + P T +L+ +G + K + S+ +
Sbjct: 504 LINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEG 563
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + V +N L+D R AE E M+Q+G PD +TY + R S
Sbjct: 564 CIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERLES 614
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 35/308 (11%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++++ L++ K + +M +G + + YN L+DA +A M + M
Sbjct: 188 TYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDM 247
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C PD +T +R G +GQ +++ S G ++ +N ++++ GK
Sbjct: 248 KQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMV 307
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM--------EYLFRLMRSERIKP 236
+K+ V+ M + TY++ +D G L ++ YL + + S +K
Sbjct: 308 DKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKS 367
Query: 237 SCVT------------------------LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
C + S++ ++GK + +L + I D
Sbjct: 368 LCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTD 427
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N + A G+LK + + + + M+ G PD TY M+ +Y G+ + A
Sbjct: 428 IGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKA---SG 484
Query: 333 LVEKMDET 340
L E+M+ +
Sbjct: 485 LFEEMEAS 492
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 4/245 (1%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDT 151
G R + +YN ++ R+K L LV + D ++ T+N + G
Sbjct: 113 GFRHDAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGM---GGGGVE 169
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ +C E + G++ + T+ ++ ++ ++ K V E M + Y I YN+++D
Sbjct: 170 VARCLELAKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLD 229
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A +AG + Q +F M+ + P T L+R G G+ K S + + L
Sbjct: 230 ALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCAL 289
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ + +N +++A G+ K ++ VL M + C+P++ TY + +T G + E
Sbjct: 290 NLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVL 349
Query: 332 DLVEK 336
D+ ++
Sbjct: 350 DICDR 354
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +KA LF+ M C + ++ L++ G++G D+A L + M+ PD
Sbjct: 474 GRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEK-GYDPD 532
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS LI+ K+ D +L +M +G PN VTYN L+D R AE
Sbjct: 533 VFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYE 592
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
M + PD T + R S + + K
Sbjct: 593 TMKQQGLTPDSITYSILERLESRSQRTARIRK 624
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+ +M G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S I +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSDVIAIVLNAY 361
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGIEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 240 KLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G + +SD++ +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLG-------------YFPDSDVI------AIVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 303 GC 304
GC
Sbjct: 381 GC 382
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 150/331 (45%), Gaps = 3/331 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++FQ M + GC T ++ L+ +G +G ++ LLE M + +P+ TY+I
Sbjct: 109 DEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNI 168
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI++ ++ +L M GI+P+ VTYNT+ AY + E ++KM
Sbjct: 169 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNI 228
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G + + + + G+ P+ FN L+ Y +
Sbjct: 229 VKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVD 288
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M+++ +VT++ +++A+ AG ++ E +F M I+P L + Y
Sbjct: 289 EALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGY 348
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG+P K ++L + + + V F ++ + + E M + G P+
Sbjct: 349 VRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNL 408
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY T++ Y G + ++L+ M+E
Sbjct: 409 KTYETLIWGY---GEAKQPWKAEELLTTMEE 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 5/327 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS- 72
L + D G ++ A+++A+ SG D+A + + MK C+P +TY+ LIK
Sbjct: 79 LLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEY-GCKPTTSTYNTLIKGF 137
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ ++ ++ L + ++PN TYN LI A+ K E L KM++ +PD
Sbjct: 138 GIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 197
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V T N RA+ +G+ + E+ K ++P+ T I++ Y K G+ + +
Sbjct: 198 VVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLY 257
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M++ V +N +I + D ++ LM IKP VT +++ A+ AG
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 317
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
E + + + I D ++ L Y R + + +L M + G +P+ V +
Sbjct: 318 LMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFT 377
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T++ + G + A F+ L EKM E
Sbjct: 378 TIISGWCAAGKMDRA--FR-LCEKMHE 401
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 38/320 (11%)
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
++ CQ V+ + L+ + + + QA+ ++++ +G +P +TY TL+ A R K
Sbjct: 13 LRGNNSCQ-TVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQK 71
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
F + L K+ +PD +N + AF SG++D K ++K + G +P+ +T+N
Sbjct: 72 RFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYN 131
Query: 173 ILLDSYGKAGH-FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
L+ +G AG +E M + Q + TYNI+I A+ L++ + M +
Sbjct: 132 TLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVA 191
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEK--------------------------------LGS 259
I+P VT ++ RAY G+ E+ +
Sbjct: 192 SGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPE 251
Query: 260 VLRFI---DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
LRF+ + + V FN L+ Y + L +M++ G KPD VT+ T++
Sbjct: 252 ALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMN 311
Query: 317 AYSTNGMKNHAKE-FQDLVE 335
A+S+ G+ + +E F D+V+
Sbjct: 312 AWSSAGLMENCEEIFNDMVK 331
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ E+A + MV G + ++ + AY ++G ++A L+ M +P+ T
Sbjct: 177 KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYN-IVKPNERT 235
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
I+I K + L M G+ PN V +N+LI Y ++ L M
Sbjct: 236 CGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLME 295
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PDV T + + A+ ++G ++ E+ + AGI+P I+ ++IL Y +AG
Sbjct: 296 EFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPR 355
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL---MRSERIKPSCVTLC 242
K A++ M KY +V + +I + AG +M+ FRL M P+ T
Sbjct: 356 KAEALLTSMSKYGVQPNVVIFTTIISGWCAAG---KMDRAFRLCEKMHEMGTSPNLKTYE 412
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+L+ YG A +P K +L ++ ++ + + DA+ + F E +L
Sbjct: 413 TLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + + G +P++ T+ L+ + + F+ + A++ + +
Sbjct: 36 GKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILL 95
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI-D 265
N +I+AF +G + + +F+ M+ KP+ T +L++ +G AG+P + +L +
Sbjct: 96 NAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQ 155
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + +N L+ A+ K E VL M G +PD VTY TM RAY+ NG
Sbjct: 156 DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETE 215
Query: 326 HAKEF-----QDLVEKMDETC 341
A+ ++V+ + TC
Sbjct: 216 RAERLILKMPYNIVKPNERTC 236
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 7/311 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ + + G NT SF L+ Y A + M C PD +Y+ ++
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEF-GCVPDTVSYNTIL 255
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ LK + + LL DM ++G+ PN TYN L+ Y R + E + M +
Sbjct: 256 DALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLL 315
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P VWT N + F N G+ID + ++ + + P + T+N L+D + ++ ++
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSL 375
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M K VTYNI++ + G++ + M + P CVT +L+ AY
Sbjct: 376 IEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCK 435
Query: 251 AGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AG K+G R +D + + +DT N ++ K E +L +RG D
Sbjct: 436 AG---KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILD 492
Query: 308 KVTYRTMVRAY 318
+V+Y ++ Y
Sbjct: 493 EVSYGILILGY 503
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK---AFSLLEHMKNTPDCQPDVNT 65
++ HEL + ++ D S L ++ G D+ A + MK + +P++ T
Sbjct: 119 DRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL-NYRPNLLT 177
Query: 66 YSILIKSCLKAFAFDKV---QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ L+ S ++ + + + +L D G+ PNT ++N LI Y + +
Sbjct: 178 CNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVN 237
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM C PD + N L A + +S G+ P+ +T+N+L+ Y + G
Sbjct: 238 KMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLG 297
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + V+E M + + T+ TYN++++ F G + + + M + P VT
Sbjct: 298 LLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYN 357
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ ++ S++ +D + + V +N ++ + E L+ M++
Sbjct: 358 TLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEEN 417
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G PD VTY T++ AY G A D
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMD 447
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 149/392 (38%), Gaps = 71/392 (18%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++ + M ++ L++ + G D+AF + + M+ + PDV TY+
Sbjct: 300 KEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM-NVLPDVVTYNT 358
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIR--------------------------------- 95
LI C + +V +L+ +M +G++
Sbjct: 359 LIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENG 418
Query: 96 --PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM- 152
P+ VTYNTLI AY +A + + +M S+ + D WT+N L ++D
Sbjct: 419 LSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY 478
Query: 153 ----------------------------EK------CYEKFQSAGIQPSINTFNILLDSY 178
EK +++ + I PS T+N ++
Sbjct: 479 NLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGL 538
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
++ ++ + M + TYNI+I F G++++ M KP
Sbjct: 539 CQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDV 598
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+R G EK + + + +D V +N ++ + + F +L
Sbjct: 599 YTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTE 658
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ + PD+ TY+ ++ A + G A+EF
Sbjct: 659 MEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF 690
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 1/218 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ ++A+ L + G + S+ L+ Y + D+A +L + MK P T
Sbjct: 472 KKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKER-QIMPSTIT 530
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I ++ D+ L++M G+ P+ TYN +I + + +M+
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PDV+T N LR G ++ K + S G + T+N ++ S K G FE
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
++ M+ TY ++I A AG +K+ E
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL---TLVKMLSEDCEPDVWTMNCTLR 141
+ + M RPN +T NTL+++ R + + L L + P+ + N +
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+ ++ K G P ++N +LD+ K ++ ++ M+ S
Sbjct: 222 GYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSP 281
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
TYN+++ + R G LK+ + +M + P+ T LV + + GK ++ +
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ +++ D V +N L+D + + +E+ ++E M ++G K + VTY +++
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK 401
Query: 322 GMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + E ++KM+E L+ PD
Sbjct: 402 G---NMTEATTTLDKMEENGLS---PD 422
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ ++A + M++ G + ++ ++ + G +KAF M +P
Sbjct: 538 LCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENL-FKP 596
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T +IL++ + +K L + + ++G + VTYNT+I + + F L
Sbjct: 597 DVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLL 656
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+M ++ PD +T + A ++G+I E+ K +GI
Sbjct: 657 TEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A F +M+ +G N ++ L+ A G +A S+L M+ C P+V TY+ L+
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGA-GCGPNVVTYNTLV 192
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ +A D + L+ M G++PN VT+N++++ +A + +M+ E
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + N + + +G + + GI P + TF L+ KAG+ E +
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M++ VT+ +ID F + G L R MR RIKPS V +L+ Y
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPD 307
G+ ++ +L ++ + D V ++ ++ AY + C + E+ QQ +G PD
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK-NC--DTHSAFELNQQMLEKGVLPD 429
Query: 308 KVTYRTMVR 316
+TY +++R
Sbjct: 430 AITYSSLIR 438
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI++ + ++L DM G PN VTYNTL+ A+ RA E
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ML +P++ T N + +G+++ K +++ G+ P ++N L+ Y K
Sbjct: 208 VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + +V M + +VT+ +I +AG+L+ L R MR ++ + VT
Sbjct: 268 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT 327
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + G + +R + I V +N L++ Y + E + +L M+
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
+G KPD VTY T++ AY N + A E Q ++EK
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V N L A ++ + + + ++ S G+ P++ T+NIL+ + GH ++ ++
Sbjct: 114 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ +VTYN ++ AF RAG++ E L +M +KP+ VT S+V
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AGK E V + + D V +N LV Y + C E V M Q+G PD VT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ +++ G A LV +M E L M F
Sbjct: 293 FTSLIHVMCKAGNLEWAVT---LVRQMRERGLQMNEVTF 328
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 156/364 (42%), Gaps = 39/364 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + M GC N ++ L++A+ R+G D A L+ M + +P++ T++
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDG-GLKPNLVTFNS 225
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y +A E +M +
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + +G ++ + + G+Q + TF L+D + K G +
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M++ ++V YN +I+ + G + + L M ++ +KP VT +++ AY
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Query: 249 -----GHAG------------KPEKL--GSVLRFI------DNSDIML----------DT 273
H+ P+ + S++R + ++ ++ D
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ L+D + + + + M + G PD VTY ++ S + A E Q L
Sbjct: 466 FTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA---RAMEAQQL 522
Query: 334 VEKM 337
+ K+
Sbjct: 523 LFKL 526
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI----KSCLKAFAFDKVQAL 85
+ AL++ Y G D+A LL M+ +PDV TYS +I K+C AF+ Q +
Sbjct: 363 YNALINGYCMVGRMDEARELLHEME-AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 421
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L +G+ P+ +TY++LI K ++ + M+ +PD +T +
Sbjct: 422 LE----KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 477
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G ++ ++K AG+ P + T+++L++ K+ M A + YH +
Sbjct: 478 EGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA--RAMEAQQLLFKLYHEEP--IP 533
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
N DA L R +K ++ +L++ + G + V + +
Sbjct: 534 ANTKYDA------------LMHCCRKAELK----SVLALLKGFCMKGLMNEADKVYQSML 577
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + LD ++ L+ + R + + M QRG P+ + +++R NGM
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ AH LF+ M+ G + ++T+L+ + + G ++A SL + M PDV T
Sbjct: 444 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA-GVLPDVVT 502
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS+LI K+ + Q LL + + P Y+ L+ +A++ + + L
Sbjct: 503 YSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL------ 556
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
L+ F G ++ +K Y+ + +++L+ + +AG+
Sbjct: 557 --------------LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602
Query: 186 K 186
K
Sbjct: 603 K 603
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 6/342 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML + EK HEL+ M +EG C +T +++AL++A+G+ G D A SL + MK
Sbjct: 203 MLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN-GL 261
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P Y+ ++ K +K L+ +M +G TY LI G+A E
Sbjct: 262 HPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYS 321
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS-Y 178
+ ML E C+PDV +N + G +G++ K +E+ +S P++ T+N ++ + +
Sbjct: 322 IFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALF 381
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ E M++ + TY+I+ID F + +++ L M + P
Sbjct: 382 ESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCP 441
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
CSL+ A G A + E + + + + + ++ G+ +E +
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M++ GC PD Y ++ GM + A L+ M+E
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEA---HSLLRTMEEN 540
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 2/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + + A LF M + G + +T +L Y + G +KA L++ MK C
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK-GCAL 298
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ LIK KA ++ ++ +M +G +P+ V N LI+ G+A A+
Sbjct: 299 TVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLF 358
Query: 122 VKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M S C P+V T N ++A F + + YEK + G+ PS T++IL+D + K
Sbjct: 359 EEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCK 418
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
EK ++E M + ++ Y +I+A G+A + LF+ +R S
Sbjct: 419 TNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV 478
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ G G+ + + + D +N L+ R+ E +L M+
Sbjct: 479 YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ GC PD ++ ++ ++ G A E
Sbjct: 539 ENGCTPDLNSHNIILNGFARTGGPKGAIE 567
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 140/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+GK + E+A+ +F M+ EGC + L++ G++G A L E M++ C P
Sbjct: 310 VGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL-QCTP 368
Query: 62 DVNTYSILIKSCLKAFAFDKVQALL--SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+V TY+ +IK+ ++ A +A L M G+ P++ TY+ LID + + + L
Sbjct: 369 NVVTYNTVIKALFESKA-RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + P + A G + + + + +++ + S + +++ G
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K + + YN ++ R G + L R M P
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ + G P+ + + NS I D V +N ++ R F E +++ M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
+G + D +TY +++ A
Sbjct: 608 NSKGFEYDLITYSSILEA 625
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
Q MV C + ++ G++ + +KA S+ +K C+P NTY+ +I +
Sbjct: 147 IQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGR-KCKPTSNTYNSMILMLM 205
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ +KV L ++M +G DC PD
Sbjct: 206 QEGHHEKVHELYNEMCNEG----------------------------------DCLPDTV 231
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + AFG G+ D+ +++ + G+ P+ + +L Y K G EK +++ M
Sbjct: 232 TYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEM 291
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ + T+ TY +I G+AG +++ +F M E KP V + +L+ G AG+
Sbjct: 292 KEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRL 351
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQQRGCKPDKVTYRT 313
+ +++ + V +N ++ A K A + E M++ G P TY
Sbjct: 352 ADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSI 411
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
++ + N ++ L+E+MDE A
Sbjct: 412 LIDGFCKT---NRVEKALLLLEEMDEKGFA 438
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ-PD 62
K + EKA L + M ++G ++ +L++A G++ ++ A L + ++ +C
Sbjct: 418 KTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE--NCGYSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK K + L ++M G P+ YN L+ R M E L
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L F +G + + + +++ I+P + ++N +L +AG
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
FE+ + +M+ M + + ++TY+ +++A G+
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 2/239 (0%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
++ TY LI A M EM T+ +M+ C ++ ++ G + ++ +
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGR 215
+ + +P+ NT+N ++ + GH EK+ + M + VTY+ +I AFG+
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G LF M+ + P+ +++ Y G+ EK +++ + L
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ L+ G+ E + M + GCKPD V ++ G + + K F+++
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 6/342 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML + EK HEL+ M +EG C +T +++AL++A+G+ G D A SL + MK
Sbjct: 203 MLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN-GL 261
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P Y+ ++ K +K L+ +M +G TY LI G+A E
Sbjct: 262 HPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYS 321
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS-Y 178
+ ML E C+PDV +N + G +G++ K +E+ +S P++ T+N ++ + +
Sbjct: 322 IFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALF 381
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ E M++ + TY+I+ID F + +++ L M + P
Sbjct: 382 ESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCP 441
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
CSL+ A G A + E + + + + + ++ G+ +E +
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M++ GC PD Y ++ GM + A L+ M+E
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEA---HSLLRTMEEN 540
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 2/329 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + A LF M + G + +T +L Y + G +KA L++ MK C
Sbjct: 241 GKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK-GCALT 299
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LIK KA ++ ++ +M +G +P+ V N LI+ G+A A+
Sbjct: 300 VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 123 KMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S C P+V T N ++A F + + YEK + G+ PS T++IL+D + K
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
EK ++E M + ++ Y +I+A G+A + LF+ +R S
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVY 479
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G G+ + + + D +N L+ R+ E +L M++
Sbjct: 480 AVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEE 539
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC PD ++ ++ ++ G A E
Sbjct: 540 NGCTPDLNSHNIILNGFARTGGPKGAIEM 568
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 140/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+GK + E+A+ +F M+ EGC + L++ G++G A L E M++ C P
Sbjct: 310 VGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL-QCTP 368
Query: 62 DVNTYSILIKSCLKAFAFDKVQALL--SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+V TY+ +IK+ ++ A +A L M G+ P++ TY+ LID + + + L
Sbjct: 369 NVVTYNTVIKALFESKA-RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + P + A G + + + + +++ + S + +++ G
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K + + YN ++ R G + L R M P
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ + G P+ + + NS I D V +N ++ R F E +++ M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
+G + D +TY +++ A
Sbjct: 608 NSKGFEYDLITYSSILEA 625
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
Q MV C + ++ G++ + +KA S+ +K C+P NTY+ +I +
Sbjct: 147 IQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGR-KCKPTSNTYNSMILMLM 205
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ +KV L ++M +G DC PD
Sbjct: 206 QEGHHEKVHELYNEMCNEG----------------------------------DCLPDTV 231
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + AFG G+ D+ +++ + G+ P+ + +L Y K G EK +++ M
Sbjct: 232 TYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEM 291
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ + T+ TY +I G+AG +++ +F M E KP V + +L+ G AG+
Sbjct: 292 KEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRL 351
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQQRGCKPDKVTYRT 313
+ +++ + V +N ++ A K A + E M++ G P TY
Sbjct: 352 ADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSI 411
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
++ + N ++ L+E+MDE A
Sbjct: 412 LIDGFCKT---NRVEKALLLLEEMDEKGFA 438
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ-PD 62
K + EKA L + M ++G ++ +L++A G++ ++ A L + ++ +C
Sbjct: 418 KTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE--NCGYSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK K + L ++M G P+ YN L+ R M E L
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L F +G + + + +++ I+P + ++N +L +AG
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
FE+ + +M+ M + + ++TY+ +++A G+
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 2/239 (0%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
++ TY LI A M EM T+ +M+ C ++ ++ G + ++ +
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGR 215
+ + +P+ NT+N ++ + GH EK+ + M + VTY+ +I AFG+
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G LF M+ + P+ +++ Y G+ EK +++ + L
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
+ L+ G+ E + M + GCKPD V ++ G + + K F+++
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 9/329 (2%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D G + S+T +++ + + G KA+S M + PDV
Sbjct: 173 RSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDR-RISPDV 231
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I + K A DK +L+ M G+ PN TY +++ Y + E L K
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKK 291
Query: 124 MLSEDC-----EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ S+ EPD+ T L+ + G + M + GI P +NIL+ +Y
Sbjct: 292 VRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAY 351
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G ++ V M++ + VTY VI ++G ++ F M E + P
Sbjct: 352 AKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 411
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ SL+ K E+ ++ + + I L+T+FFN ++D++ + E + + ++
Sbjct: 412 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + G KPD +TY T++ Y G + A
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEA 500
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 150/333 (45%), Gaps = 4/333 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD 58
L K + +KA E+ +MV G N +++T+++ Y SG +A L+ +++ PD
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300
Query: 59 -CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+PD+ TY L++ A + ALL M GI P+ YN LI AY + E
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L KM + PD T + SG+++ +E+ G+ P +N L+
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+E+ ++ M + +N +ID+ + G + + E LF LM +KP
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+T +L+ Y AGK ++ +L + + + +TV + L++ Y ++ + + +
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ G PD +TY +++ AKE
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 573
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 145/341 (42%), Gaps = 9/341 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDAN-----TQSFTALLSAYGRSGLFDKAFSLLEHM 53
M G C QP++A + + +G + + ++ LL Y G +LL+ M
Sbjct: 273 MHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLM 332
Query: 54 KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
PD Y+ILI + K D+ + S M QG+ P+ VTY +I ++
Sbjct: 333 VRN-GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGR 391
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+ L +M+ E P N + + + E+ + GI + FN
Sbjct: 392 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 451
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
++DS+ K G + + + M + I+TY+ +ID + AG + + L M S
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+KP+ VT +L+ Y + + + +++S + D + +N ++ + + A K
Sbjct: 512 LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 571
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+ + + G + + TY ++ N + + A + FQ+L
Sbjct: 572 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 13/278 (4%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
P V+TY+ILI C +A D A L ++ +G R +T+ L+ K ++ M++
Sbjct: 85 PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L +M C PDV++ L+ S + + + G P + ++ +++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF--GRAGDLKQMEYLFRLMRSERI 234
+ K G K + M S +VTY+ +I A G+A D K ME L ++++ +
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD-KAMEVLTSMVKNG-V 262
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV-----FFNCLVDAYGRLKCF 289
P+C T S++ Y +G+P++ L+ + + + D + + L+ Y
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M +L++M + G PD Y ++ AY+ G + A
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 139/369 (37%), Gaps = 46/369 (12%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G + + L+ AY + G D+A + M+ PD TY +I
Sbjct: 326 HALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ-GLNPDAVTYGAVIG 384
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M +G+ P + YN+LI + E +++ML
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ N + + G++ EK ++ G++P I T++ L+D Y AG ++ ++
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--- 248
M VTY +I+ + + + LF+ M S + P +T +++
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564
Query: 249 -------------GHAGKPEKLGS----------------VLRFIDN---SDIMLDTVFF 276
+G +L + LR N D+ L+ F
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N ++DA ++ E K + G P+ TYR M G L+E+
Sbjct: 625 NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG----------LLEE 674
Query: 337 MDETCLAMK 345
+D+ L+M+
Sbjct: 675 LDQLFLSME 683
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 112/279 (40%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +P+
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV-GLKPN 515
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 516 TVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 575
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + ++ T N L + D + ++ ++ TFNI++D+ K G
Sbjct: 576 RITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 635
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + TY ++ + G L++++ LF M L
Sbjct: 636 RNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 695
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR G+ + G+ L ID L+ + +D
Sbjct: 696 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 734
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 50/372 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML Q EK HEL+ M +EG C +T +++AL+SA+ + G D A LL MK
Sbjct: 203 MLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQ 262
Query: 57 PD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
P C+PDV TY+ LI+ KA D+
Sbjct: 263 PTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHF 322
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLSEDCEPDVWTMNC 138
+M +G +P+TV N +I+ G+A K+F EM ++ C P+V T N
Sbjct: 323 YHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS-------HCIPNVVTYNT 375
Query: 139 TLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++A F + ++ + +E+ + +GI PS T++IL+D + K EK ++E M +
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ Y +IDA G+A LF+ ++ S +++ G AG+ +
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
++ + + +N L+ R E + MQ+ GC PD +Y ++
Sbjct: 496 INLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNG 555
Query: 318 YSTNGMKNHAKE 329
+ G + A E
Sbjct: 556 LAKTGGPHRAME 567
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 141/345 (40%), Gaps = 15/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K KA +F + C Q++ +++ G ++K L M N CQ
Sbjct: 168 MLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQ 227
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P Y +I + +G +
Sbjct: 228 PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM C PDV+T +R G +G+ID Y + Q G +P N
Sbjct: 288 FEEMRYMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNN 340
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + E M H +VTYN +I A F + ++ F M+
Sbjct: 341 MINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I PS T L+ + + EK +L +D + L+DA G+ K +
Sbjct: 401 GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + +++ Y M++ G + A D + K+
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 4/287 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNTPDCQ 60
LGK + + +LF+ M C N ++ ++ A S + FS E MK +
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS-GIS 403
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P TYSILI K +K LL +M +G P Y +LIDA G+AK + ++
Sbjct: 404 PSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLACE 462
Query: 121 LVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + L E+C ++ G +G++D +++ G P++ +N L+
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA 522
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A ++ M MQ++ I +YNI+++ + G + + M++ IKP V
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
+ +++ A HAG E+ +++ ++ D + ++ +++A G++
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ + M EGC +T +++ G++G D L E M C P
Sbjct: 310 LGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM-GVSHCIP 368
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ ++ + +V + M GI P+ TY+ LID + + E +
Sbjct: 369 NVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRI-EKAMM 427
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + D + +++ + S + +++ G
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + + M K + + YN ++ RA L + R M+ P
Sbjct: 488 KAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDIN 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P + +L + NS I D V +N ++ A F E +++ M
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
G + D +TY +++ A
Sbjct: 608 NALGFEYDLITYSSILEA 625
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A LF M GC N ++ AL+S R+ + D+A + + M+ C P
Sbjct: 486 LGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH-GCLP 544
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+N+Y+I++ K + +L++M I+P+ V+YNT++ A A MF E +
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELM 604
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+M + E D+ T + L A G Q
Sbjct: 605 KEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 2/260 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT-VTYNTLIDAYGRAKMFAEME 118
Q D +TY LI + ++ ++ +M I T + + +I G AKM +
Sbjct: 120 QHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAI 179
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDS 177
++ + C+P N + + GQ + + + Y + + G QP T++ L+ +
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISA 239
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + ++ M++ T Y ++I F + ++ LF MR +P
Sbjct: 240 FCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPD 299
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+R G AG+ ++ + DTV N +++ G+ + + E
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M C P+ VTY T+++A
Sbjct: 360 EMGVSHCIPNVVTYNTIIKA 379
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 1/312 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ + G + F+ ++ Y ++G ++A S+LE M D PDV + +
Sbjct: 576 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 635
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++ K DK+Q L + GI N YN +I+ RA E+ T +M+
Sbjct: 636 LRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGF 695
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N L +G + + + + + G+ I ++N ++ +YGK + MS+
Sbjct: 696 TPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKNKDYTNMSS 754
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ MQ +S ++ YN ++DA+G+ +++ + + M+ P T ++ YG
Sbjct: 755 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 814
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G +++ VL+ + S + D +N L+ AYG E G+++ M+ R PDKV
Sbjct: 815 EQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKV 874
Query: 310 TYRTMVRAYSTN 321
TY +V A N
Sbjct: 875 TYTNLVTALRRN 886
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLS--EDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
N V Y+ ++ GR + + E L+K L + + N + A G + K
Sbjct: 173 NFVAYSLILRVLGRREEWDRAE-DLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASK 231
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV---TYNIVID 211
+ G++P++ T +L+ Y K + E+ +M+K+ IV Y+ +I
Sbjct: 232 WFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKF----GIVCESAYSSMIT 287
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ R + E + LM+ +R++ ++ AY GK E S+L ++ +
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + +N L+ YG++ +G+ + G +PD+ +YR+M+ + AK +
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHY 406
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 144/338 (42%), Gaps = 19/338 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+ M + +++ +L+AY + G + A S+L M+ P++ Y+
Sbjct: 296 DKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME-AAGFSPNIIAYNT 354
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K F + Q L + G+ P+ +Y ++I+ +GRA + E + ++
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ + + + G D K E G Q S + I+L +Y K G + +
Sbjct: 415 YKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVP 473
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC-------VTL 241
V++ H +++ ++ A+ + G ++ L+R ++ + S + +
Sbjct: 474 CVLKGSFHNHIRLNQTSFSSLVMAYVKHG---MVDDCLGLLREKKWRDSAFESHLYHLLI 530
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
CS +G+ + SD ++ + ++D Y + F+E + + ++
Sbjct: 531 CSC----KESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKS 586
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G D++ + +VR Y G +E ++E MDE
Sbjct: 587 SGVVLDRIGFSIVVRMYVKAG---SLEEACSVLEIMDE 621
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/334 (17%), Positives = 131/334 (39%), Gaps = 37/334 (11%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N +++ +L GR +D+A L++ + + Q ++ +I +C K
Sbjct: 172 GNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASK 231
Query: 85 LLSDMSTQGIRPNTVT----------------------------------YNTLIDAYGR 110
M G+RPN T Y+++I Y R
Sbjct: 232 WFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTR 291
Query: 111 AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
+++ + E + M + + L A+ G+++ E ++AG P+I
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N L+ YGK E + + +Y +I+ +GRA + ++ ++ ++ ++
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD-TVFFNCLVDAYGRLKCF 289
KP+ L +L+ G ++ G++ D + I + ++ AY ++
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYG--DRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKI 469
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ VL+ + ++ ++ ++V AY +GM
Sbjct: 470 DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGM 503
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 130/306 (42%), Gaps = 5/306 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSIL 69
A + F M++ G N + L+ Y ++ ++A HM+ C+ + YS +
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE---SAYSSM 285
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + +DK + ++ M +R + +++AY + E LV M +
Sbjct: 286 ITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ N + +G +++ + + + + G++P ++ +++ +G+A ++E+
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ +++ Y +I+ + GD M + S + L +++AY
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYE 464
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK + + VL+ ++ I L+ F+ LV AY + + G+L + R +
Sbjct: 465 KVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESH 524
Query: 310 TYRTMV 315
Y ++
Sbjct: 525 LYHLLI 530
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/384 (18%), Positives = 152/384 (39%), Gaps = 56/384 (14%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E A LF + + G + + S+ +++ +GR+ +++A + +K C
Sbjct: 360 GKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR---CGYK 416
Query: 63 VNTYSILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
N++++ L+A D+ A+ + DM+ G + +++ ++ AY + +
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCV 475
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY--EKFQSAGIQPSINTFNILLDSY 178
L + + + + A+ G +D +K++ + + + +++L+ S
Sbjct: 476 LKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL--YHLLICSC 533
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
++G + + + + + +ID + G+ + E L+ ++S +
Sbjct: 534 KESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDR 593
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFID-NSDIMLDTVFF--------------------- 276
+ +VR Y AG E+ SVL +D DI+ D F
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 277 --------------NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
NC+++ R E+ G E M + G P+ VT+ ++ Y
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK-- 711
Query: 323 MKNHAKEFQDLVEKMDETCLAMKR 346
AK F+ K++E L KR
Sbjct: 712 ----AKLFK----KVNELFLLAKR 727
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 168/354 (47%), Gaps = 14/354 (3%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+ G CK + E+A E+ M+ NT ++ L+S + ++A + L + +
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEA-TELARVLTSKG 416
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEM 117
PDV T++ LI+ L +M T+G P+ TYN LID+ R ++ E
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL--EE 474
Query: 118 ELTLVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L+L+K M S C +V T N + F + +I+ E+ +++ + GI ++ T+N L+D
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K E+ + +M+ M TYN ++ F RAGD+K+ + + M S +P
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
VT +L+ AG+ E +LR + ++L +N ++ A R K +E +
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLF 654
Query: 297 EVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
M ++G PD VTY+ + R S G A +F LVE D+ L PDF
Sbjct: 655 REMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDF--LVEMTDKGFL----PDF 702
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 146/322 (45%), Gaps = 3/322 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+ M +EG + +F +L++ R G A +L+ M
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE-GFD 348
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI K ++ +L+ M + PNTVTYNTLI + E
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ S+ PDV T N ++ + + +E+ ++ G P T+N+L+DS
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ ++++ M+ S +VTYN +ID F + +++ E +F M + I + VT
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + E+ ++ + + D +N L+ + R + +++ M
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
GC+PD VTY T++ S G
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAG 610
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 3/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + Q M GC+ +F L+ +Y + LFD+A ++++ M+ +
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKL 174
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ L+ + V+ + S M ++GI+P+ T+N LI A RA L +
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S PD T ++ F G ++ + E+ +AG S T N+L+ Y K
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKE 294
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E++ + ++ M + T+N +++ R G +K + +M E P T
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ G+ E+ +L + D +TV +N L+ + E + V+
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+G PD T+ ++++ + N+ + +L E+M
Sbjct: 415 KGILPDVCTFNSLIQGLC---LTNNHRLAMELFEEM 447
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 150/347 (43%), Gaps = 7/347 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + Q A + + M G + ++FT L+ + G + A + E M C
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV-AAGCPS 279
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
T ++L+ K ++V + + +MS +G RP+ T+N+L++ R L
Sbjct: 280 SNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL 339
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML E +PD++T N + G+++ + + P+ T+N L+ + K
Sbjct: 340 DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKE 399
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E+ + + + + T+N +I + + LF M+++ P T
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTY 459
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ + G+ E+ S+L+ +++S + V +N L+D + + K E + + + M+
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL 519
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+G + VTY T++ N + ++ + MD+ + +PD
Sbjct: 520 QGISRNVVTYNTLIDGLCKN------RRVEEAAQLMDQMLMEGLKPD 560
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKY 197
LR G G +M + ++ + G + TF IL++SY K F++ AV++ M +++
Sbjct: 111 VLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEF 170
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--GHAGKP- 254
TYN +++ LK +E + M S IKP T L++A H +P
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230
Query: 255 ----EKLGS-------------VLRFIDNSDI---------ML------DTVFFNCLVDA 282
E++GS + FI+ ++ M+ V N LV
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
Y + E+ ++ M G +PD+ T+ ++V G HA E D++
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342
>gi|2980784|emb|CAA18211.1| puative protein [Arabidopsis thaliana]
gi|7269983|emb|CAB79800.1| puative protein [Arabidopsis thaliana]
Length = 1075
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 1/312 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ + G + F+ ++ Y ++G ++A S+LE M D PDV + +
Sbjct: 747 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 806
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++ K DK+Q L + GI N YN +I+ RA E+ T +M+
Sbjct: 807 LRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGF 866
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N L +G + + + + + G+ I ++N ++ +YGK + MS+
Sbjct: 867 TPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKNKDYTNMSS 925
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ MQ +S ++ YN ++DA+G+ +++ + + M+ P T ++ YG
Sbjct: 926 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 985
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G +++ VL+ + S + D +N L+ AYG E G+++ M+ R PDKV
Sbjct: 986 EQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKV 1045
Query: 310 TYRTMVRAYSTN 321
TY +V A N
Sbjct: 1046 TYTNLVTALRRN 1057
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLS--EDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
N V Y+ ++ GR + + E L+K L + + N + A G + K
Sbjct: 344 NFVAYSLILRVLGRREEWDRAE-DLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASK 402
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV---TYNIVID 211
+ G++P++ T +L+ Y K + E+ +M+K+ IV Y+ +I
Sbjct: 403 WFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKF----GIVCESAYSSMIT 458
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ R + E + LM+ +R++ ++ AY GK E S+L ++ +
Sbjct: 459 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 518
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ + +N L+ YG++ +G+ + G +PD+ +YR+M+ + AK +
Sbjct: 519 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHY 577
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 144/338 (42%), Gaps = 19/338 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+ M + +++ +L+AY + G + A S+L M+ P++ Y+
Sbjct: 467 DKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME-AAGFSPNIIAYNT 525
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K F + Q L + G+ P+ +Y ++I+ +GRA + E + ++
Sbjct: 526 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 585
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ + + + G D K E G Q S + I+L +Y K G + +
Sbjct: 586 YKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVP 644
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC-------VTL 241
V++ H +++ ++ A+ + G ++ L+R ++ + S + +
Sbjct: 645 CVLKGSFHNHIRLNQTSFSSLVMAYVKHG---MVDDCLGLLREKKWRDSAFESHLYHLLI 701
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
CS +G+ + SD ++ + ++D Y + F+E + + ++
Sbjct: 702 CSC----KESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKS 757
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G D++ + +VR Y G +E ++E MDE
Sbjct: 758 SGVVLDRIGFSIVVRMYVKAG---SLEEACSVLEIMDE 792
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/334 (17%), Positives = 131/334 (39%), Gaps = 37/334 (11%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N +++ +L GR +D+A L++ + + Q ++ +I +C K
Sbjct: 343 GNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASK 402
Query: 85 LLSDMSTQGIRPNTVT----------------------------------YNTLIDAYGR 110
M G+RPN T Y+++I Y R
Sbjct: 403 WFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTR 462
Query: 111 AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
+++ + E + M + + L A+ G+++ E ++AG P+I
Sbjct: 463 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 522
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N L+ YGK E + + +Y +I+ +GRA + ++ ++ ++ ++
Sbjct: 523 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 582
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD-TVFFNCLVDAYGRLKCF 289
KP+ L +L+ G ++ G++ D + I + ++ AY ++
Sbjct: 583 RCGYKPNSFNLFTLINLQAKYG--DRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKI 640
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ VL+ + ++ ++ ++V AY +GM
Sbjct: 641 DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGM 674
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 130/306 (42%), Gaps = 5/306 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSIL 69
A + F M++ G N + L+ Y ++ ++A HM+ C+ + YS +
Sbjct: 400 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE---SAYSSM 456
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + +DK + ++ M +R + +++AY + E LV M +
Sbjct: 457 ITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 516
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ N + +G +++ + + + + G++P ++ +++ +G+A ++E+
Sbjct: 517 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 576
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ +++ Y +I+ + GD M + S + L +++AY
Sbjct: 577 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYE 635
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK + + VL+ ++ I L+ F+ LV AY + + G+L + R +
Sbjct: 636 KVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESH 695
Query: 310 TYRTMV 315
Y ++
Sbjct: 696 LYHLLI 701
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/387 (18%), Positives = 153/387 (39%), Gaps = 62/387 (16%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E A LF + + G + + S+ +++ +GR+ +++A + +K C
Sbjct: 531 GKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR---CGYK 587
Query: 63 VNTYSILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
N++++ L+A D+ A+ + DM+ G + +++ ++ AY + +
Sbjct: 588 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCV 646
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----MEKCYEKFQSAGIQPSINTFNILL 175
L + + + + A+ G +D EK K++ + + + +++L+
Sbjct: 647 LKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREK---KWRDSAFESHL--YHLLI 701
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
S ++G + + + + + +ID + G+ + E L+ ++S +
Sbjct: 702 CSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVV 761
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFID-NSDIMLDTVFF------------------ 276
+ +VR Y AG E+ SVL +D DI+ D F
Sbjct: 762 LDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQH 821
Query: 277 -----------------NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
NC+++ R E+ G E M + G P+ VT+ ++ Y
Sbjct: 822 LYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYG 881
Query: 320 TNGMKNHAKEFQDLVEKMDETCLAMKR 346
AK F+ K++E L KR
Sbjct: 882 K------AKLFK----KVNELFLLAKR 898
>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
rugosa]
Length = 348
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 138/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+ +M G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 31 VFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFXEMREIK-CL 89
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 90 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 149
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 150 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 209
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 210 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 265
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K ++ + V + M+
Sbjct: 266 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR 325
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 326 GLGYFPDSDVIAIVLNAY 343
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 131/270 (48%), Gaps = 10/270 (3%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ + +
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYST 62
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 63 LLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G+ HAK +KRPD
Sbjct: 243 ERAGLVAHAKRLLH----------ELKRPD 262
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 5/247 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 103 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 161
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 162 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 221
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 222 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 277
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V I + +I + + +F MR P +
Sbjct: 278 RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIA 337
Query: 243 SLVRAYG 249
++ AYG
Sbjct: 338 IVLNAYG 344
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + EKA+ L Q M G + N+ +++ ++S +G+ G D+A L + ++++ + D
Sbjct: 173 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS-GVEID 231
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +I + +A + LL ++ RP+ + +T I A E
Sbjct: 232 QILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFR 287
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + D+ + + + + ++K + G P + I+L++YGK
Sbjct: 288 QAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 5/328 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L + M +A+ + ++ + D AF+L M+ T +
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME-TKGIR 287
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ LI SCL + + LLS+M + I PN VT++ LIDA+ + E E
Sbjct: 288 PDVFTYNSLI-SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ +PD++T + + F ++D + +E S P++ T+N L+ +
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ + M + VTYN +I +AGD + +F+ M S+ + P +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ GK EK V ++ S + D +N +++ + + + +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G KP+ + Y TM+ + G+K A
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A LF M +G + ++ +L+S G + A LL +M P
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK-INP 323
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+S LI + +K + + L +M + I P+ TY++LI+ + E +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 122 VKMLSEDCEPDVWTMNCTLRAF----------------------GNS------------- 146
M+S+DC P+V T N ++ F GN+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G D +K ++K S G+ P I T++ILLD K G EK V EY+QK I TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI+I+ +AG ++ LF + + +KP+ + +++ + G E+ ++ R +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 267 SDIMLDTVFFNCLVDAYGR 285
+ D+ +N L+ A R
Sbjct: 564 DGTLPDSGCYNTLIRARLR 582
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ A L MV+ G +T +F L+ +A +L++ M CQPD+ T
Sbjct: 164 KRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVT 222
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++ K D +LL M I + V YNT+ID + K + KM
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME 282
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ PDV+T N + N G+ + I P++ TF+ L+D++ K G
Sbjct: 283 TKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + M K I TY+ +I+ F L + +++F LM S+ P+ VT +L+
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + A + E+ + R + ++ +TV +N L+ + + + + M G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 306 PDKVTYRTMV 315
PD +TY ++
Sbjct: 463 PDIITYSILL 472
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F LLSA + FD SL E M+N D+ +Y+I
Sbjct: 62 DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR-ISYDLYSYNI 120
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G P+ VT ++L++ Y +K ++ + +M+
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T N + + ++ G QP + T+ +++ K G +
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M+K +V YN +ID + + LF M ++ I+P T SL+
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V F+ L+DA+ + E + + + M +R PD
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +++ + + + AK +L+ D
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ MV +G + +++ LL + G +KA + E+++ + +PD+ TY+I+I
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMI 507
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L +S +G++PN + Y T+I + R + E + +M +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD N +RA G + ++ +S G +T +++++
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 14/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ KQ ++L M+ +GC N ++ ++ +YGR+ A ++ + M+ C+
Sbjct: 388 LLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEA-GCE 446
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI K+ D + M G+ P+T TY+ +I+ G+A
Sbjct: 447 PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRL 506
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ E C P++ T N + + + K Y Q +G +P T+ I+++ G
Sbjct: 507 FCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGH 566
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ + MQK ++ Y +++D +G++G++++ + M +KP+ T
Sbjct: 567 CGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPT 626
Query: 241 ----LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L + +R + + + L S+L F + T+ +C DA +M
Sbjct: 627 CNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTN-----DMGFCC 681
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG--MKNHAKEFQDLVEKMDE 339
E+MQ G T+ + + NG +++H +F DL+ D
Sbjct: 682 ELMQVTGHPAH--TFLVSLPSAGPNGQNVRDHMSKFLDLMHSEDR 724
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A +K P + D +TY+ +I +A F + LL M G +PN VTYN +I
Sbjct: 362 ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRII 421
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+YGRA + +M CEPD T + SG +D YEK Q AG+
Sbjct: 422 HSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLT 481
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GKAGH + M +VTYNI+I +A + + L
Sbjct: 482 PDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKL 541
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+R M+ +P VT C ++ GH G E+ + + + + D + LVD +G+
Sbjct: 542 YRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGK 601
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ M + G KP+ T +++ A+
Sbjct: 602 SGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAF 634
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
R + TY T+I GRAK FA + L +M+ + C+P+V T N + ++G + +
Sbjct: 376 RHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+++ Q AG +P T+ L+D + K+G + + E MQ + TY+++I+ G
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLG 495
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+AG L LF M E P+ VT ++ A E + R + S D V
Sbjct: 496 KAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKV 555
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +++ G E +G+ MQ++ PD+ Y +V + +G A E+
Sbjct: 556 TYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEW 611
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 203 IVTYNIVIDAFGRAGDLKQME-------YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
I N IDA+ LK+++ + + L R R + T +++ G A +
Sbjct: 337 IGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFA 396
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ +L + + V +N ++ +YGR + V + MQ+ GC+PD+VTY T++
Sbjct: 397 AINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLI 456
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCL 342
++ +G + A + EKM + L
Sbjct: 457 DIHAKSGFLDVA---MGMYEKMQDAGL 480
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 41 GLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT 100
G + KAF++L M + QPD + Y+++I + K + M +GI P+ VT
Sbjct: 7 GDWQKAFAVLREM-HASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVT 65
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+NTLIDA+ + +M +C P T N + G + +E + +
Sbjct: 66 WNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMK 125
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
G+ P+I T+ L+D YG++G F++ +E M+ + Y+ +++A+ + G
Sbjct: 126 EQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLAD 185
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ + MR++ ++ S V L SL+ A+G + + SVL+F+ +D+ D + + L+
Sbjct: 186 HALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLM 245
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
A R++ F ++ + E M GC PD+ R M+R+
Sbjct: 246 KALIRIEQFDKVPVIYEEMITSGCAPDRKA-RAMLRS 281
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M +EG + + ++ L+ A+ + G D+A L E M+ + +C P TY+I+I
Sbjct: 47 AMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRES-NCPPGTTTYNIMI 105
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + V+ +LS+M QG+ PN +TY TL+D YGR+ F E + M ++ +
Sbjct: 106 NLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLK 165
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + + A+ G D + ++ G++ S N L++++G+ + +V
Sbjct: 166 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSV 225
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+++M++ ++TY ++ A R ++ ++ M
Sbjct: 226 LQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEM 264
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ + M ++G N ++T L+ YGRSG F +A +E MK +
Sbjct: 107 LLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMK-ADGLK 165
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y L+ + + D ++ M G+ +TV N+L++A+G + E
Sbjct: 166 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSV 225
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M D PDV T ++A Q D + YE+ ++G P
Sbjct: 226 LQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAP 271
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G +K +VLR + S + D F+N ++D +G+ C M++ G +PD VT+
Sbjct: 7 GDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTW 66
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
T++ A+ G + A E L E+M E+
Sbjct: 67 NTLIDAHRKGGRHDRAME---LFEEMRES 92
>gi|168012907|ref|XP_001759143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689842|gb|EDQ76212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 18/262 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY------GRSGLFDKAFSLLEHMKNT 56
GK + A LF + G ++ + AL++AY GR F+ A L E MK
Sbjct: 125 GKARDLRMAVWLFNEVKRSGSRPDSSLYNALITAYLHSRDKGRG--FEAAMKLFEKMKQK 182
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
P CQP++ TY+IL+++ + +V +M I P+ VTYN +I AY A + +
Sbjct: 183 PKCQPNLVTYNILLRASAQLGDVVQVDRFFKEMEAAKIYPDLVTYNGVIGAYAEAGDYVQ 242
Query: 117 MELTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS---------AGIQP 166
ME+TL M + + +PD T N + A+G ME+ F + + +P
Sbjct: 243 MEMTLFVMRIQKHIKPDNVTSNTLIGAYGRGKDFVKMEQVVSLFTAVLKSMTGSKSKHRP 302
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+ T+N+L+ SY +A E M M++ + ++ I++ FG GD ++M F
Sbjct: 303 DLKTYNLLMSSYARAQDMENMLWSFSRMEEASFKPNFRSFEILMYGFGGVGDFEKMRECF 362
Query: 227 RLMRSERIKPSCVTLCSLVRAY 248
M IKP TL +++ AY
Sbjct: 363 HQMLEASIKPQTSTLNTMISAY 384
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY------GRA-----KMF 114
Y+ LI KA L +++ G RP++ YN LI AY GR K+F
Sbjct: 117 YAKLIVISGKARDLRMAVWLFNEVKRSGSRPDSSLYNALITAYLHSRDKGRGFEAAMKLF 176
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+M+ C+P++ T N LRA G + +++ +++ ++A I P + T+N +
Sbjct: 177 EKMK------QKPKCQPNLVTYNILLRASAQLGDVVQVDRFFKEMEAAKIYPDLVTYNGV 230
Query: 175 LDSYGKAGHFEKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS-- 231
+ +Y +AG + +M + M+ + H VT N +I A+GR D +ME + L +
Sbjct: 231 IGAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTSNTLIGAYGRGKDFVKMEQVVSLFTAVL 290
Query: 232 -------ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ +P T L+ +Y A E + ++ + + F L+ +G
Sbjct: 291 KSMTGSKSKHRPDLKTYNLLMSSYARAQDMENMLWSFSRMEEASFKPNFRSFEILMYGFG 350
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ F +M+ M + KP T TM+ AY
Sbjct: 351 GVGDFEKMRECFHQMLEASIKPQTSTLNTMISAY 384
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQ----- 83
++ ++ AY +G + + L M+ +PD T + LI + + F K++
Sbjct: 226 TYNGVIGAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTSNTLIGAYGRGKDFVKMEQVVSL 285
Query: 84 --ALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
A+L M S RP+ TYN L+ +Y RA+ M + +M +P+ +
Sbjct: 286 FTAVLKSMTGSKSKHRPDLKTYNLLMSSYARAQDMENMLWSFSRMEEASFKPNFRSFEIL 345
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ FG G + M +C+ + A I+P +T N ++ +Y K FE+ +++ ++
Sbjct: 346 MYGFGGVGDFEKMRECFHQMLEASIKPQTSTLNTMISAYCKHNFFEEAEELLKEALEWQI 405
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+Y I++ A+ R L ME L MR + P + + +G A E
Sbjct: 406 HPRTSSYLIILRAYARDNRLNDMERLIERMRIADVAPVSASFLKSLEHFGLANWSE 461
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 31/351 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG C +P + L +++ G Q AL ++ + GL+ P
Sbjct: 173 LGCCIEPYAYNYLLNSLIAHG---RAQDAVALFESWIQDGLY----------------SP 213
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV +++++IK + F K L+ M+ G P+T+T+N L+D RAK + L
Sbjct: 214 DVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVL 273
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ + C P+ T + + +G+++ Y +G +P+ T+N+L++ YGK
Sbjct: 274 RRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGK 333
Query: 181 AGHFEKMSAVMEYMQKY--HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
A E SAV Y Q H +VT++ +ID + R G L + +++ M I+P+
Sbjct: 334 ALDME--SAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNV 391
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T ++ + + + +LR ++ +DI T +N ++D + E ++
Sbjct: 392 YTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVT 451
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
M+++GC PDK TY ++ + MK E L KM E A RPD
Sbjct: 452 DMKEKGCHPDKYTYTILIIGHC---MKGRIPEAITLFHKMVE---AGCRPD 496
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 36/323 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA EL + M + GC +T + L+ R+ +K +L ++ C P+ TY+
Sbjct: 232 QKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTS 291
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA + ++ +DM G RPNTVTYN LI+ YG+A +++
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRH 351
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKM 187
C PDV T + + + GQ+D ++ +++ IQP++ TF+I++ S K E +
Sbjct: 352 CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEAL 411
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ E + + YN VID + G + + + M+ + P T L+
Sbjct: 412 DILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILI-- 469
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GH K GR+ E + M + GC+PD
Sbjct: 470 IGHCMK------------------------------GRIP---EAITLFHKMVEAGCRPD 496
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
+T + V GM N +
Sbjct: 497 NITVNSFVSCVLKAGMPNEVDQI 519
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 13/317 (4%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
QS+ +++ RSG A L + M + P+ +S + SC A D LL+
Sbjct: 109 QSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLT 168
Query: 88 DMSTQGIRPNTVTYNTLID---AYGRAKMFAEMELTLVKMLSEDC--EPDVWTMNCTLRA 142
S G YN L++ A+GR A+ + L + +D PDVW+ N ++
Sbjct: 169 KGSRLGCCIEPYAYNYLLNSLIAHGR----AQDAVALFESWIQDGLYSPDVWSFNVVIKG 224
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW- 201
G + E+ G P T NIL+D +A K V+ +Q+
Sbjct: 225 VCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMP 284
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
VTY VI + +AG ++ ++ M +P+ VT L+ YG A E +
Sbjct: 285 NAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMY 344
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
R + D V F+ L+D Y R + K + + M +P+ T+ ++ +
Sbjct: 345 RQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCK- 403
Query: 322 GMKNHAKEFQDLVEKMD 338
+N + E D++ +++
Sbjct: 404 --QNRSAEALDILRELN 418
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 5/153 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C Q + A +++ M N +F+ ++ + + +A +L + D P
Sbjct: 368 RCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQT 427
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ +I K D+ +++DM +G P+ TY LI + E K
Sbjct: 428 FIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHK 487
Query: 124 MLSEDCEPDVWTMN----CTLRAFGNSGQIDTM 152
M+ C PD T+N C L+A G ++D +
Sbjct: 488 MVEAGCRPDNITVNSFVSCVLKA-GMPNEVDQI 519
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 3/329 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML Q EK HEL+ M EG C +T +++AL+SA+ + G D A LL MK+
Sbjct: 203 MLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDN-GM 261
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
QP Y++L+ K +L +M Q RP+ TY LI G+A E
Sbjct: 262 QPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYH 321
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS-Y 178
+M E C PD MN + G +G++D K +++ + PS+ T+N ++ + +
Sbjct: 322 FFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALF 381
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
++ + E M++ S + TY+I+ID F + +++ L M + P
Sbjct: 382 ESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP 441
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
CSL+ A G A + + + + + + + + ++ G+ + + +
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDE 501
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + GC PD Y ++ + GM + A
Sbjct: 502 MNKLGCAPDVYAYNALMSGLARTGMLDEA 530
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L + M T C P
Sbjct: 310 LGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEM-GTLRCIP 368
Query: 62 DVNTY------------------------------------SILIKSCLKAFAFDKVQAL 85
V TY SILI K +K L
Sbjct: 369 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 428
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFG 144
L +M +G P Y +LIDA G+AK + ++ L + L E+C ++ G
Sbjct: 429 LEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLACELFQELKENCGSSSSRVYAVMIKHLG 487
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G++D +++ G P + +N L+ + G ++ + M MQ++ I
Sbjct: 488 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 547
Query: 205 TYNIVIDAFGRAGDL 219
+YNI+++ + DL
Sbjct: 548 SYNIILNGLQKQEDL 562
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ A G++ +D A L + +K +C
Sbjct: 418 KTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--NCGSSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK KA D + +M+ G P+ YN L+ R M E T+
Sbjct: 476 SRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+M C PD+ + N L + +C+
Sbjct: 536 RMQEHGCIPDINSYNIILNGLQKQEDLIVQWRCF 569
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 108/284 (38%), Gaps = 39/284 (13%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+T TY LI + + EM + +M+ C ++ +R GN+ +
Sbjct: 122 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFG 214
+ + ++ QP+ +N ++ G +EK+ + M + + +TY+ +I AF
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFC 241
Query: 215 RAG-----------------------------------DLKQMEYLFRLMRSERIKPSCV 239
+ G D+ LF MR + +P
Sbjct: 242 KLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVF 301
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+R G AG+ ++ + DT+ N +++ G+ + + + M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEM 361
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
C P VTY T+++A + K+ A E E+M E+ ++
Sbjct: 362 GTLRCIPSVVTYNTIIKALFES--KSRASEVPSWFERMKESGIS 403
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 144/323 (44%), Gaps = 5/323 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K E A + + M D G + +F+ L Y + +KA + L + D
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN---EKAEAALGVYETAVDSGV 350
Query: 62 DVNTY--SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+N Y SIL+ + K +K + +L +G+ PN V YNT+ID Y R +
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M + +PD NC +R F G+++ EK K + G+ PS+ T+NIL+ YG
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ F+K +++ M+ +V+Y +I+ + L + + + R M + P
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ GK E + + I L+ V +N L+D +E + +L +
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
++G KPD TY +++ Y G
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAG 613
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 139/336 (41%), Gaps = 10/336 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ EKA E+ + +G N + ++ Y R G A +E M+ +PD
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ-GMKPD 423
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+ LI+ + + + ++ M +G+ P+ TYN LI YGR F + L
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M P+V + + ++ + + G+ P + +N+L+D G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + M K +VTYN +ID G L + E L + + +KP T
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE-VMQQ 301
SL+ YG AG ++ ++ + S I ++ L+ C E + E + +
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-----CTKEGIELTERLFGE 658
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ-DLVEK 336
KPD + Y ++ Y+ +G A Q ++EK
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 146/389 (37%), Gaps = 79/389 (20%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLS------------------------- 35
+L + K +A +LF A+ +EG ++ S T LL
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177
Query: 36 ---AYGRS-----GLFD--KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
YG++ L D K L MK+ P V Y++LI K + + L
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHD-RIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+M + + P+ +TYNTLID Y +A K F E +M ++ EP + T N L+
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE----RMKADHIEPSLITFNTLLK 292
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG---------------------- 179
+G ++ E ++ + G P TF+IL D Y
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 180 -------------KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
K G EK ++ V YN +ID + R GDL
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M + +KP + L+R + G+ E + + + +N L+ YGR
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
F + +L+ M+ G P+ V+Y T++
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 40/330 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + M +G + +++ L+ YGR FDK F +L+ M++ P+V +Y
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN-GTMPNVVSYGT 499
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRP-------------------------------- 96
LI K + Q + DM +G+ P
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 97 ---NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
N VTYNTLID +E E L+++ + +PDV+T N + +G +G +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
YE+ + +GI+P++ T+++L+ K G + + ++ YN V+ +
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTKEG----IELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
GD+++ L + M + I T SL+ GK ++ S++ ++ ++ +
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+N +V + +K + MQ++G
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 10/287 (3%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCL--KAFAFDKVQALLSDMSTQGIRPNTVTYNT 103
AFSL ++P + D +S L+ S L ++ + L + +GI P++ +
Sbjct: 98 AFSL-----SSPSLKHD---FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTL 149
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
L+D + K F + +L D P + ++A + + + + +
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I PS+ +N+L+D K + + M +++TYN +ID + +AG+ ++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ M+++ I+PS +T +L++ AG E +VL+ + + + D F+ L D Y
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ GV E G K + T ++ A G A+E
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + A +L + +G + ++ +L+S YG +G + +L E MK + +
Sbjct: 576 MTGKLSE---AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-GIK 631
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY +LI C K + + L +MS ++P+ + YN ++ Y + +ME
Sbjct: 632 PTLKTYHLLISLCTKE-GIELTERLFGEMS---LKPDLLVYNGVLHCYA---VHGDMEKA 684
Query: 121 L---VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M+ + D T N + G++ + ++ + ++P +T+NI++
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV-- 742
Query: 178 YGKAGHFEKMSAVMEYMQKYHY 199
GH E V +YM Y +
Sbjct: 743 ---KGHCE----VKDYMSAYVW 757
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA ++ +K + PD+ Y+ +I KA F + ++L+ +M T G+ PNT +Y+
Sbjct: 21 YSKAIAIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 200 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 295
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R ++ + D F ++ + K +A + V + M+
Sbjct: 284 RDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 344 GLGYFPDSNVIAVVLNAY 361
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 139/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K A+ S + G P+ V YN +I+ +G+AK+F E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + + I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + D++ ++TM+ AY G+ HAK +KRPD
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 40/299 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 239
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 240 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 295
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 296 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYANVVEVF 339
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+R G+ F D++ I + +++AYG+L+ F + V MQ+
Sbjct: 340 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLQXFDKANDVYMEMQE 379
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 14/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ KQ ++L M+ +GC N ++ ++ +YGR+ A ++ + M+ C+
Sbjct: 388 LLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEA-GCE 446
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI K+ D + M G+ P+T TY+ +I+ G+A
Sbjct: 447 PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRL 506
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ E C P++ T N + + + K Y Q +G +P T+ I+++ G
Sbjct: 507 FCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGH 566
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ + MQK ++ Y +++D +G++G++++ + M +KP+ T
Sbjct: 567 CGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPT 626
Query: 241 ----LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L + +R + + + L S+L F + T+ +C DA +M
Sbjct: 627 CNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTN-----DMGFCC 681
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG--MKNHAKEFQDLVEKMDE 339
E+MQ G T+ + + NG +++H +F DL+ D
Sbjct: 682 ELMQVTGHPAH--TFLVSLPSAGPNGQNVRDHMSKFLDLMHSEDR 724
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A +K P + D +TY+ +I +A F + LL M G +PN VTYN +I
Sbjct: 362 ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRII 421
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+YGRA + +M CEPD T + SG +D YEK Q AG+
Sbjct: 422 HSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLT 481
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GKAGH + M +VTYNI+I +A + + L
Sbjct: 482 PDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKL 541
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+R M+ +P VT C ++ GH G E+ + + + + D + LVD +G+
Sbjct: 542 YRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGK 601
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ M + G KP+ T +++ A+
Sbjct: 602 SGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAF 634
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
R + TY T+I GRAK FA + L +M+ + C+P+V T N + ++G + +
Sbjct: 376 RHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+++ Q AG +P T+ L+D + K+G + + E MQ + TY+++I+ G
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLG 495
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+AG L LF M E P+ VT ++ A E + R + S D V
Sbjct: 496 KAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKV 555
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +++ G E +G+ MQ++ PD+ Y +V + +G A E+
Sbjct: 556 TYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEW 611
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 203 IVTYNIVIDAFGRAGDLKQME-------YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
I N IDA+ LK+++ + + L R R + T +++ G A +
Sbjct: 337 IGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFA 396
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ +L + + V +N ++ +YGR + V + MQ+ GC+PD+VTY T++
Sbjct: 397 AINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLI 456
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCL 342
++ +G + A + EKM + L
Sbjct: 457 DIHAKSGFLDVA---MGMYEKMQDAGL 480
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+ +M T G+ P T +Y+
Sbjct: 45 YSKAISIFSRLKXS-GXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYS 103
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y F E +M C D+ T N + +G G +K + +
Sbjct: 104 TLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKM 163
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN +I +G+ + ++
Sbjct: 164 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 223
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S + +D + F ++ A
Sbjct: 224 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 283
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 284 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 319
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 153/316 (48%), Gaps = 13/316 (4%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++ +G+ GLFD A S L+ M+ D P D+ S LI+ K + K ++ S +
Sbjct: 1 ITHFGKEGLFDXALSWLQKMEX--DXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXS 58
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P+ YN +I+ +G+AK+F E + +M + P + + L + + +
Sbjct: 59 GXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEA 118
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + + + T NI++D YG+ G ++ + M+K +V+YN ++
Sbjct: 119 LSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 178
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+G A + +LFRLM+ + I+ + VT S++ YG + EK ++++ + + I +
Sbjct: 179 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPN 238
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY G+ HAK
Sbjct: 239 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 298
Query: 333 LVEKMDETCLAMKRPD 348
+KRPD
Sbjct: 299 ----------ELKRPD 304
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K +A L M G T S++ LL+ Y + F +A S+ M+ C
Sbjct: 73 VFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXK-CL 131
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 132 XDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 191
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ QS GI+P+ T++ ++ +GK
Sbjct: 192 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 251
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ + + +I A+ RAG + + L ++ +P +
Sbjct: 252 VGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 307
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AG+ E+ V R +S + D F ++ + K + + V + M+
Sbjct: 308 RDTAIHILAGAGRIEEATYVFRQAIDSGEVKDITVFERMIHLLSKYKKYMNVVEVFDKMR 367
Query: 301 QRGCKPDKVTYRTMVRAY 318
G PD ++ AY
Sbjct: 368 GLGYFPDSNVIAVVLNAY 385
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 40/302 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 145 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 203
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 204 VVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 263
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 264 KLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 319
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + ID+ G D+ E + L+ + + V +
Sbjct: 320 RIEEATYV---------------FRQAIDS-GEVKDITVFERMIHLLSKYKKYMNVVEVF 363
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+R G+ F D++ I + +++AYG+L F + + MQ+
Sbjct: 364 DKMRGLGY------------FPDSNVIAV-------VLNAYGKLHEFDKASDIYMEMQEV 404
Query: 303 GC 304
GC
Sbjct: 405 GC 406
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 10/332 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M +EG N +T +L+ + +K S +K P TY
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLK-ACGLSPTAATYGC 311
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K KA K +L +M G+ PN + Y ++D Y R F M+S
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T N + AF +G++D E Q+ + P+I T+ +LD Y K GH +K
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + ++ +V+YN ++ +A ++ + M + + P+ + +L Y
Sbjct: 432 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGY 491
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCK 305
AG EK + + + ++ +D V + L+ A + M+ +EV QQ G K
Sbjct: 492 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK---SGAMQRAVEVFQQITDAGLK 548
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++TY TM+ ++ G + A+ DL++ M
Sbjct: 549 HNRITYCTMLDGWARKGELSKAR---DLLKDM 577
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 144/309 (46%), Gaps = 1/309 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA ++ + M G N + ++ Y R G F AF + E M + +PD+ TY+IL
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV-SAGLKPDIVTYNIL 382
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + KA DK +L ++ + P TY +++D Y + + ++ +
Sbjct: 383 VHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGL 442
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V + N L + Q++ ++ + G+ P+ ++ L + Y +AG EK
Sbjct: 443 RPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFG 502
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M+K + + IV Y ++ A ++G +++ +F+ + +K + +T C+++ +
Sbjct: 503 MFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWA 562
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ K +L+ + LDT+ + + A R E+ L VM+++ + +
Sbjct: 563 RKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNAR 622
Query: 310 TYRTMVRAY 318
TY T++ +
Sbjct: 623 TYTTLIHGW 631
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++T++L Y + G KA + + +K T +P V +Y+ L+ KA + + +L
Sbjct: 412 ETYTSILDGYVKGGHIQKALEVFDRIK-TAGLRPGVVSYNSLLSGLAKARQMENARLMLD 470
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M G+ PN +Y L + Y RA + +M E+ D+ L+A SG
Sbjct: 471 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 530
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + +++ AG++ + T+ +LD + + G K +++ MQK+ + + Y
Sbjct: 531 AMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYT 590
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I A R+GD +++ +MR ++++ + T +L+ + A P++ S S
Sbjct: 591 SFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKAS 650
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ LD+ NCL+ G + C ++ + E +Q
Sbjct: 651 GLQLDSALSNCLLS--GLISCASQNSTLGEKIQ 681
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 63 VNTYSILIKSCLKAFAF---------DKV--QALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
VN + ++ K L+ + DKV +A M I+PN Y +LI AY A
Sbjct: 120 VNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEA 179
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+ +MLS+ + + + + ++G + E +EKF++ + P +
Sbjct: 180 RDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVY 239
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N ++ +Y +AG+ E + A++ M++ + + Y V++ F D ++ F +++
Sbjct: 240 NSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA 299
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ P+ T +V+ + AG K +L +D + + + + ++D Y R F
Sbjct: 300 CGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTA 359
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V E M G KPD VTY +V A+ G + A
Sbjct: 360 AFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 7/308 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A F+AM N +T+L+ AY + + A + E M + Q + + +I
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML-SQGIQLNEAVFCSII 208
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
A + + + + P + YN+++ AY +A +E L +M E +
Sbjct: 209 SGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQ 268
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKC---YEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
++ L F +I EKC + + ++ G+ P+ T+ ++ + KAG+ K
Sbjct: 269 GNLGLYTTVLNGF---AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKA 325
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++E M K+ S + Y +++D + R GD ++ M S +KP VT LV A
Sbjct: 326 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHA 385
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ AG+ +K VL I + ++ + ++D Y + + V + ++ G +P
Sbjct: 386 FCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPG 445
Query: 308 KVTYRTMV 315
V+Y +++
Sbjct: 446 VVSYNSLL 453
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +Q E A + M+ G N +S+TAL Y R+G +KAF + + MK +
Sbjct: 456 LAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK-ENLAI 514
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y L+K+C K+ A + + ++ G++ N +TY T++D + R ++ L
Sbjct: 515 DIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL 574
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M D ++A SG + + + + ++ + T+ L+ +
Sbjct: 575 KDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 631
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+E +++ I+P+++ + L+ +Y +A E A E M + +I +
Sbjct: 154 FEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYAS 213
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AG+ + E+ F ++E + P + S+V+AY AG E + ++L ++ +
Sbjct: 214 AGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGL 273
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ +++ + ++ + ++ G P TY +V+ ++ G N AK D++E
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAG--NMAKAL-DILE 330
Query: 336 KMDE 339
+MD+
Sbjct: 331 EMDK 334
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 157/327 (48%), Gaps = 3/327 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ Q E+A L + M EG + +++A++ A + G + A L M T PD
Sbjct: 44 GRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMP-TKGIAPD 102
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+Y I +C + + LL +M + + PN + YN+ I++ +A + E+ ++LV
Sbjct: 103 ARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQW-EIAVSLV 161
Query: 123 K-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K M + PDV + + + A G G+ + + +E +++G+ P + T+ + +
Sbjct: 162 KEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANG 221
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +++ +++ + + +++Y+ VI A + G K L R M++ R+ P+ +T
Sbjct: 222 GRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITY 281
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + A G+ ++ +LR + + D V ++ ++DA + + E +L M
Sbjct: 282 NAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPT 341
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAK 328
G P+ ++Y + + A + G AK
Sbjct: 342 VGLSPNAISYNSAIDACAKGGQWKEAK 368
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 1/300 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M +G + +S+ A ++A R G + A LL M D P+V Y+ I SC KA
Sbjct: 94 MPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLAR-DVTPNVIIYNSAINSCAKAG 152
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
++ +L+ +M+T G+ P+ ++Y++ I A GR + E M + PDV T
Sbjct: 153 QWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYG 212
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ A N G+ K + G+ P++ +++ ++ + K G ++ ++ M+
Sbjct: 213 SAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAM 272
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ I+TYN IDA + G K+ L R M + + P V+ S++ A + ++
Sbjct: 273 RLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEA 332
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+LR + + + + +N +DA + + E KG+L M G + Y + + A
Sbjct: 333 IDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAA 392
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 160/347 (46%), Gaps = 9/347 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A L + M G + S+++ +SA GR G +++A L E M+ T PDV
Sbjct: 150 KAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMR-TSGVAPDV 208
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY I +C + + +LL + T G+ PN ++Y+++I A + + ++ L L++
Sbjct: 209 ITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW-KIALDLLR 267
Query: 124 -MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + P++ T N + A G+ + + G+ P + +++ ++D+ K
Sbjct: 268 EMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGD 327
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++ ++ M S ++YN IDA + G K+ + L R M + + +
Sbjct: 328 RWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYN 387
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S + A + ++ ++LR + + ++ +DA G+ + + K +L M
Sbjct: 388 SAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATV 447
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
G P++V Y + + A G + +E DL+ +M L+ PD
Sbjct: 448 GLAPNEVCYNSAIDAC---GRGDQWEEAVDLLREMPTVGLS---PDV 488
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 139/304 (45%), Gaps = 3/304 (0%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
RSG + KA ++ MK P D +Y + I +C + +++ LL +M T+G P+
Sbjct: 9 RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDL 68
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
Y+ +IDA + + L++M ++ PD + + A G+ +
Sbjct: 69 SAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLRE 128
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ + P++ +N ++S KAG +E ++++ M + +++Y+ I A GR G
Sbjct: 129 MLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGR 188
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ LF MR+ + P +T S + A + G+ ++ S+LR I + + + ++
Sbjct: 189 WEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSS 248
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
++ A + + +L M+ P+ +TY + A + G KE DL+ +M
Sbjct: 249 VITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGG---RWKEAIDLLREMP 305
Query: 339 ETCL 342
L
Sbjct: 306 TVGL 309
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L + + G N S++++++A + G + A LL MK P++ TY+
Sbjct: 225 KEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAM-RLAPNIITYNA 283
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I +C K + + LL +M T G+ P+ V+Y+++IDA + + E L +M +
Sbjct: 284 AIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVG 343
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ + N + A GQ + + +AG+ + +N + + K +++
Sbjct: 344 LSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEAL 403
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M T+ +Y+ IDA G+ + + L R M + + P+ V S + A
Sbjct: 404 ALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDAC 463
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + E+ +LR + + D ++ + A + + E VL+ M G PD
Sbjct: 464 GRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDL 523
Query: 309 VTYRTMVRAYSTNG 322
+ Y + + A S G
Sbjct: 524 ICYNSAIDACSKGG 537
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L + M+ N + + +++ ++G ++ A SL++ M T PDV +YS I
Sbjct: 122 ALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMA-TVGLAPDVISYSSAI 180
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+C + +++ L DM T G+ P+ +TY + I A + E L K+ +
Sbjct: 181 SACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLT 240
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V + + + A GQ + ++ + P+I T+N +D+ K G +++ +
Sbjct: 241 PNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDL 300
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M +V+Y+ VIDA + K+ + R M + + P+ ++ S + A
Sbjct: 301 LREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAK 360
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ ++ +LR + + + + +N + A + + + E +L M G +
Sbjct: 361 GGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFS 420
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y + + A + AKE
Sbjct: 421 YSSAIDACGKGNLWIKAKEL 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 4/312 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++ A + A + G + +A LL M T PDV +YS +I +C K + + +
Sbjct: 277 NIITYNAAIDACAKGGRWKEAIDLLREMP-TVGLPPDVVSYSSVIDACSKGDRWKEAIDI 335
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L +M T G+ PN ++YN+ IDA + + E + L +M + V N + A
Sbjct: 336 LREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAK 395
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Q + + G+ ++ +++ +D+ GK + K ++ M + V
Sbjct: 396 GEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVC 455
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN IDA GR ++ L R M + + P + S + A + ++ +VL+ +
Sbjct: 456 YNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMS 515
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ + D + +N +DA + + +L M+ G P+ ++Y + + A G
Sbjct: 516 AAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGG--- 572
Query: 326 HAKEFQDLVEKM 337
KE L+E+M
Sbjct: 573 QWKEGIALLEEM 584
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q ++A L + M G + + ++A + + +A +LL M T V
Sbjct: 360 KGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMP-TVGLHTTV 418
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YS I +C K + K + LL +M+T G+ PN V YN+ IDA GR + E L +
Sbjct: 419 FSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLRE 478
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + PDV++ + + A Q ++ +AG+ P + +N +D+ K G
Sbjct: 479 MPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGR 538
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ A++ M+ + I++Y+ IDA R G K+ L MR + P +T +
Sbjct: 539 WKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHA 598
Query: 244 LV 245
L+
Sbjct: 599 LM 600
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++ + M G N S+ + + A + G + +A LL M Q V Y+
Sbjct: 330 KEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQ-RVIGYNS 388
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I +C K + + ALL +M T G+ +Y++ IDA G+ ++ + + L +M +
Sbjct: 389 AIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVG 448
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ N + A G Q + + + G+ P + +++ + + K +++
Sbjct: 449 LAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEAL 508
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV++ M + ++ YN IDA + G K L MR+ + P+ ++ S + A
Sbjct: 509 AVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
G+ ++ ++L + S ++ D + ++ L+
Sbjct: 569 VRGGQWKEGIALLEEMRGSGVVPDVITYHALM 600
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 154/353 (43%), Gaps = 26/353 (7%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ E A LF M + G + ++ +L+ +G+ GL D+ + E MK+ DC PD
Sbjct: 67 CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA-DCDPD 125
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI K K L +M G++PN VTY+T IDA+ + M E V
Sbjct: 126 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M P+ +T + A +G + K E+ AGI+ ++ T+ LLD + G
Sbjct: 186 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 245
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ V M + TY ++ F +A +++ + + + M+ + IKP +
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY------------------- 283
+++ + + E+ ++ I S I + V + L+DAY
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 365
Query: 284 --GRLK--CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G K CF K + + M +G PDK+ Y ++ +G A +D
Sbjct: 366 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 418
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E F M +S ALL + G D + + M + V TY+I
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM-GAAGIKRSVFTYNI 61
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K + ++L + M G P+ VTYN+LID +G+ + E +M D
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGKAGHFE 185
C+PDV T N + F + + M K +E + ++ G++P++ T++ +D++ K G +
Sbjct: 122 CDPDVITYNALINCF---CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ M++ + TY +IDA +AG+L + L + IK + VT +L+
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G+ ++ V R + N+ + + + LV + + K K +L+ M+++ K
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298
Query: 306 PDKVTYRTMVRAYSTNGMKNHAK 328
PD + Y T++ AK
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAK 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%)
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ +C+ K + + P + N LL K G + + M ++ TYNI
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID + GDL+ LF M+ P VT SL+ +G G ++ + + ++D
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D + +N L++ + + + + L M+ G KP+ VTY T + A+ GM A
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 329 EF 330
+F
Sbjct: 182 KF 183
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%)
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
M E +KM P + N L G+ D K ++ +AGI+ S+ T+N
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I++D K G E ++ M++ ++ IVTYN +ID G+ G L + +F M+
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P +T +L+ + + K L + + + + V ++ +DA+ + E
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
M++ P++ TY +++ A G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAG 210
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 32/327 (9%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++A + F M N ++T+L+ A ++G +A L+E + + +
Sbjct: 172 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLN 230
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT-- 120
V TY+ L+ + + + + M G+ PN TY L+ + +AK EME
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK---EMEYAKD 287
Query: 121 LVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++K + E C +PD+ L N +++ + + + +GI + + L+D+Y
Sbjct: 288 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 347
Query: 180 KAGH-----------------------FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
K+G FE + + M + Y +ID +
Sbjct: 348 KSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 407
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
G+L++ L M ++ +L+ H+G+ +K ++L + ++ D V +
Sbjct: 408 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 467
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRG 303
CL+ Y L E + M +RG
Sbjct: 468 MCLIKKYYALGKVDEALELQNEMAKRG 494
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 7/335 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLF--DKAFSLLEHMKNTPDCQPDVNTYS 67
KA EL AM GC + SF L++A +SG + A LL+ ++N+ +PD TY+
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS-GLRPDAITYN 301
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+ +C + D + DM +P+ TYN +I YGR + AE E +++ +
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF + +++ Y++ Q G T+N ++ YGK G +
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 188 SAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ + +TY ++ID+ G+A + L M IKP+ T +L+
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK E+ + S D + ++ ++D R + G+ M G P
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+ +N + + Q + M+E C
Sbjct: 542 SYTLYELMILGLMK---ENRSDDIQKTIRDMEELC 573
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+C E+A +F M+ +G +S LL A G ++ + ++E ++ D
Sbjct: 798 AQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ---DMGFK 854
Query: 63 VNTYSILIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
++ SIL+ L AFA +V+ + S M G P Y +I+ + K + E
Sbjct: 855 ISKSSILL--MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + +M + + ++ N L+ + + Y++ + G++P T+N L+ Y
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF------------ 226
+ E+ +M+ M+ + TY +I AFG+ L+Q E LF
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 227 -----------------------RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
++M++ I+P+ T+ L+ +Y +G P++ VL
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN 1092
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++++ L T+ ++ ++DAY R K + L M++ G +PD + VRA S
Sbjct: 1093 LKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAAS 1148
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 143/354 (40%), Gaps = 57/354 (16%)
Query: 9 EKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
++A E+F+ + + N + A+L GR A + + P V Y+
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIF--TRAEPTVGDRVQVYN 229
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY------------------- 108
++ ++ F K Q L+ M +G P+ +++NTLI+A
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 109 -------------------------GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
G K+F +ME + C+PD+WT N + +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDME-------AHRCQPDLWTYNAMISVY 342
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G G E+ + + + G P T+N LL ++ + + EK+ V + MQK +
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMR--SERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+TYN +I +G+ G L L++ M+ S R P +T L+ + G A + + +++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + I ++ L+ Y + E + M + G KPD + Y M+
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 150/331 (45%), Gaps = 7/331 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---DCQPDVNTY 66
+A ++F + GC+A+ +++ Y + G + A ++ + C P Y
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MY 755
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I++ K + K ++++ ++ G P+ T+N+L+ AY + + M+
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P V ++N L A G+++ + E+ Q G + S ++ ++LD++ +AG+ +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ Y TI Y ++I+ + ++ E + M K S+++
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y +K V + I + + D +N L+ Y R + E +++ M+ G P
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY++++ A+ A++ F++L+ K
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 3/248 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ A + M + + ++L Y + K + + +K T +
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET-GLE 959
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI + ++ L+ M G+ P TY +LI A+G+ K + E
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++LS+ + D + ++ +SG EK + ++AGI+P++ T ++L+ SY
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCV 239
+G+ ++ V+ ++ T + Y+ VIDA+ R+ D +E L M+ E ++P
Sbjct: 1080 SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE-MKKEGLEPDHR 1138
Query: 240 TLCSLVRA 247
VRA
Sbjct: 1139 IWTCFVRA 1146
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ EK E++Q M G + ++ ++ YG+ G D A L + MK PD T
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++LI S KA + AL+S+M GI+P TY+ LI Y +A E E T ML
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+PD + L + Y S G PS + +++
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 126/307 (41%), Gaps = 2/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + + G + + ++L +Y SG +AF LLE +K + T ++++
Sbjct: 593 AARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV 652
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVT-YNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
C + +D G + T Y TL+ + +AE + C
Sbjct: 653 LHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGC 712
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT-FNILLDSYGKAGHFEKMS 188
E + + G +T + + ++ G + + + ++++YGK ++K
Sbjct: 713 EASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAE 772
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+V+ +++ + + T+N ++ A+ + G ++ +F M + P+ ++ L+ A
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+L V+ + + + ++DA+ R E+K + M+ G P
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 309 VTYRTMV 315
YR M+
Sbjct: 893 RLYRMMI 899
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 147/366 (40%), Gaps = 45/366 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +A L M+D G Q+++AL+ Y ++G ++A M + +P
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKP 506
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS+++ L+ K L DM + G P+ Y +I + +++ T+
Sbjct: 507 DNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTI 566
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M E C + ++ L G+ D + + + G + +T +L SY
Sbjct: 567 RDM-EELCGMNPLEISSVLV----KGECFDLAARQLKVAITNGYELENDTLLSILGSYSS 621
Query: 181 AGHFEKMSAVMEYMQKYHY-SWTIVTYNIVI-----------------------DAFGRA 216
+G + ++E+++++ S ++T +++ FG +
Sbjct: 622 SGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSS 681
Query: 217 GDLKQMEY-------------LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+ + + +F +R + S S+V Y G PE V+
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 264 IDNSDIMLD-TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + +++AYG+ K + + + V+ ++Q G PD T+ +++ AY+ G
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 323 MKNHAK 328
A+
Sbjct: 802 CYERAR 807
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG--MKNHAKEFQDL 333
+N ++ Y R F++ + +++ M+QRGC PD +++ T++ A +G N A E D+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 334 V 334
V
Sbjct: 288 V 288
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 160/385 (41%), Gaps = 44/385 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML Q EK H+L+ M EG C +T +++AL+SA+ + G D A LL MK
Sbjct: 170 MLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEI-GM 228
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
QP Y++LI K +L +M Q RP+ TY LI G+A E
Sbjct: 229 QPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYH 288
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS-Y 178
+M E C PD MN + G +G++D K +++ ++ PS+ T+N ++ + +
Sbjct: 289 FFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALF 348
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
++ + E M++ S + TY+I+ID F + +++ L M + P
Sbjct: 349 ESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP 408
Query: 239 VTLCSLVRAYG--------------------------------HAGKPEKLGSVLRFIDN 266
CSL+ A G H GK +L + D
Sbjct: 409 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 468
Query: 267 SDIM---LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + D +N L+ R E + MQ+ GC PD +Y ++ + G
Sbjct: 469 MNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGG 528
Query: 324 KNHAKEFQDLVEKMDETCLAMKRPD 348
+ A E ++ M ++ + RPD
Sbjct: 529 PHRAME---MLSNMKQSTV---RPD 547
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 145/370 (39%), Gaps = 50/370 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K +A +F + C Q++ +++ G ++K L M C
Sbjct: 135 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCF 194
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P T Y LI DA+G +
Sbjct: 195 PDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 254
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM + C PDV+T +R G +G+ID + + Q G +P N
Sbjct: 255 FEEMR-------HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 307
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + + M+ ++VTYN +I A F ++ F M+
Sbjct: 308 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 367
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK----- 287
I PS T L+ + + EK +L +D + L+DA G+ K
Sbjct: 368 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 427
Query: 288 --CFAEMK----------------------------GVLEVMQQRGCKPDKVTYRTMVRA 317
F E+K + + M + GC PD Y ++
Sbjct: 428 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487
Query: 318 YSTNGMKNHA 327
+ GM + A
Sbjct: 488 LARTGMLDEA 497
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 143/322 (44%), Gaps = 39/322 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L + M+ T C P
Sbjct: 277 LGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME-TLRCIP 335
Query: 62 DVNTYSILIKSCLKA-----------------------FAF-------------DKVQAL 85
V TY+ +IK+ ++ F + +K L
Sbjct: 336 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 395
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFG 144
L +M +G P Y +LIDA G+AK + ++ L + L E+C ++ G
Sbjct: 396 LEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLACELFQELKENCGSSSARVYAVMIKHLG 454
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G++D +++ G P + +N L+ + G ++ + M MQ++ I
Sbjct: 455 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 514
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+YNI+++ + G + + M+ ++P V+ +++ A HAG E+ +++ +
Sbjct: 515 SYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 574
Query: 265 DNSDIMLDTVFFNCLVDAYGRL 286
+ D + ++ +++A G++
Sbjct: 575 NTLGFEYDLITYSSILEAIGKV 596
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 111/284 (39%), Gaps = 39/284 (13%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+T TY LI + + EM + +M+ C ++ +R GN+ +
Sbjct: 89 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITI 148
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFG 214
+ + ++ QP +N ++ G +EK+ + M + + VTY+ +I AF
Sbjct: 149 FYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFC 208
Query: 215 RAGD-------LKQME----------------------------YLFRLMRSERIKPSCV 239
+ G L +M+ LF MR + +P
Sbjct: 209 KLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVF 268
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+R G AG+ ++ + DTVF N +++ G+ + + + M
Sbjct: 269 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 328
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ C P VTY T+++A + K+ A E E+M E+ ++
Sbjct: 329 ETLRCIPSVVTYNTIIKALFES--KSRASEVPSWFERMKESGIS 370
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 39/365 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLGK K+ E + M G + ++ +++A R G KA LL MK + +
Sbjct: 571 MLGKSKEAE---SFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRS-SIK 626
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT-------------------- 100
P++ TYS LI +A A +K + LL++MS+ G P ++T
Sbjct: 627 PNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEI 686
Query: 101 ---------------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
YNTL+ M + + L +M PD T N +
Sbjct: 687 HEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFK 746
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG +D Y++ GI P++ TFN LL AG + V+ M+K + +T
Sbjct: 747 SGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLT 806
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+I++ +G+ + + L+ M + P T +L+ + G + + +
Sbjct: 807 YDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQ 866
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
N ++ + ++ LV + +L+ E++ L+ M+++G P K T ++ RA+S GM
Sbjct: 867 NRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSW 926
Query: 326 HAKEF 330
A+
Sbjct: 927 EARRL 931
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 153/392 (39%), Gaps = 73/392 (18%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ E A ++ M +G + N ++T + Y R D AFSL E M
Sbjct: 218 GLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK-GVL 276
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T S L+ K F + AL +M G PN VTY LID +A+ E
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +++S D+ + G+ID + + S P+ T+ +L+D+ K
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ + V+ M++ S +VT++ +I+ + G + + R M+ I P+ VT
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456
Query: 241 ------------------------LC-----------SLVRAYGHAGKPEKLGSVLRFID 265
LC SLV GK EK ++ R ++
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516
Query: 266 NSDIMLDTVFFNCLVDAYGR-----------------------------LKCF------A 290
++LD V + L+D + + C
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
E + LE MQ G KPD+VTY TM+ A S G
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREG 608
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 7/319 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++A ++F+ + + N ++T L+ A ++G D A +L M+ P+
Sbjct: 360 CKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK-SISPN 418
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V T+S +I +K K + +M +GI PN VTY T+ID G K + V
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVID--GSFKCLGQEAALDV 476
Query: 123 --KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML E E + + ++ + +G+I+ E + + G+ + L+D K
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ V + + + + V YN+ I+ G K+ E M+S +KP VT
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A GK K +L + S I + + ++ L+ + K +L M
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656
Query: 301 QRGCKPDKVTYRTMVRAYS 319
G P +T+R +++A S
Sbjct: 657 SSGFSPTSLTHRRVLQACS 675
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 144/331 (43%), Gaps = 9/331 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++ L +V G + +TAL+ + G D+A + H + + P
Sbjct: 324 LAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHAL-SDNHTP 382
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY++LI + KA D + +LS+M + I PN VT++++I+ + + +
Sbjct: 383 NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYM 442
Query: 122 VKMLSEDCEPDVWT----MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M +P+V T ++ + + G +D Y + G++ + + L++
Sbjct: 443 REMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV----YHEMLCEGVEVNKFIVDSLVNG 498
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G EK A+ M + V Y +ID + G+L + + + + + P
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V + GK ++ S L + ++ + D V +N ++ A R A+ +L
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLN 618
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
M++ KP+ +TY T++ G AK
Sbjct: 619 GMKRSSIKPNLITYSTLIVGLFEAGAVEKAK 649
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 161/408 (39%), Gaps = 76/408 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAF-------------- 47
L K + EKA LF+ M + G + ++T L+ ++G AF
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558
Query: 48 ---------------------SLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
S LE M++T +PD TY+ +I + + K LL
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQST-GLKPDQVTYNTMIAAQSREGKTAKALKLL 617
Query: 87 SDMSTQGIRPNTVTYNTLI------DAYGRAKM---------FAEMELTLVKML---SED 128
+ M I+PN +TY+TLI A +AK F+ LT ++L S+
Sbjct: 618 NGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQG 677
Query: 129 CEPDV------WTMNCTL-----------RAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
D+ W MN L R +G E+ GI P TF
Sbjct: 678 RRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N L+ + K+GH + + + M + S + T+N ++ AG + + + + M+
Sbjct: 738 NALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK 797
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID--NSDIMLDTVFFNCLVDAYGRLKCF 289
I+PS +T LV YG + K+ +V + + + +N L+ + ++
Sbjct: 798 RGIEPSNLTYDILVTGYGK--QSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMM 855
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
++ K + MQ RG P TY +V +S ++F +D+ EK
Sbjct: 856 SQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEK 903
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 3/217 (1%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+TV+YN ++ + A E L +M D T+N L G++D
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 157 EKFQSAGIQPSINT--FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
E G ++ +N L+D Y K G E AV E M+ +V YN ++
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
RAG++ + M+ + ++P+ VT + Y + S+ + ++ D V
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
+ LV + F+E + M++ G P+ VTY
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTY 317
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 138/333 (41%), Gaps = 15/333 (4%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDCQPDVNTYSILIKSCLK 75
A++ +T S+ ++S + G L E K P VNT +L+ C +
Sbjct: 93 ALLRSSESVDTVSYNVVMSGFSEQGGLAPEALLAEMCKRGVPFDAVTVNT--VLVGLC-R 149
Query: 76 AFAFDKVQALLSDMSTQGIRP--NTVTYNTLIDAYGRAKMFAEMELTLV---KMLSEDCE 130
D+ AL M G + V +N+L+D Y + +ME +M ++
Sbjct: 150 DGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKV---GDMETAFAVAERMKAQGVG 206
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
DV N + +G++D + + G++P++ T+ + + Y + + ++
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSL 266
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M + +VT + ++ + G + LFR M P+ VT C L+
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + + S+L + + +++D + + L+D + E K + P+ VT
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
Y ++ A G + A++ ++ +M+E ++
Sbjct: 387 YTVLIDALCKAGNVDGAEQ---VLSEMEEKSIS 416
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C PDV Y+ +I K +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVN 236
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTY++++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + TFN+L+ S K G ++ V + M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +YNI+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 416
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + + + + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 477 HGSLLKAKEL 486
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 43/365 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C + ++ ++ + + G +KA L + M + P PD T
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDFVT 256
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS ++ + KA A DK +A L M +G+ PN TYN LI Y + E +M
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PDV T N + + G+I ++ G P + ++NI+L+ Y G
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
M+ + + M + I T+N++I A+ G L + +F MR +KP+ +T +++
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436
Query: 246 RAYGHAGK-----------------PEKL------------GSVLRF------IDNSDIM 270
A GK P+K GS+L+ I N+ +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD V F+ +++ +L + + + ++ G P V Y ++ Y G M+ +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 330 FQDLV 334
F +V
Sbjct: 557 FDAMV 561
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAAS---R 100
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R + + N L+ + AK
Sbjct: 101 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAK 160
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P +
Sbjct: 161 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPDV 219
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + VTY+ V+ A +A + + E R
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ 279
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++ + P+ T +L+ Y G+ ++ V + + I+ D V FN L+ + YG+
Sbjct: 280 MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGK 339
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 340 IK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 150/341 (43%), Gaps = 10/341 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ++F M +G + + S+ +L+ Y G L + M P
Sbjct: 338 GKIKE---ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD-GIAPV 393
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
+ T+++LIK+ DK + ++M G++PN +TY T+I A R KM ME
Sbjct: 394 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME-KF 452
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PD + +C ++ F G + ++ + + G+ I F+ ++++ K
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKL 512
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + T V Y++++D + G +++ +F M S I+P+ V
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+LV Y G+ ++ S+ R + I T+ +N ++D K M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA----KEFQDLVEKMD 338
G +K TY ++R N + A KE + + K+D
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 131/303 (43%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G +F L+ AY G+ DKA + M++ +P+V TY+ +I +
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPNVLTYTTVIAA 438
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ Y+ LI + + + + ++++ D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G++ + ++ + G+ P+ +++L+D Y G EK V +
Sbjct: 499 IVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M V Y +++ + + G + + LFR M + IKPS + ++ AG
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I ++ ++ ++ + +CF E + + ++ K D +T
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 678
Query: 313 TMV 315
TM+
Sbjct: 679 TMI 681
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 124/308 (40%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N D+ +S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVLFSS 504
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P V Y+ L+D Y + M+S
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+ + + G+ID + + GI+PS +NI++D +AG
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + TY+IV+ + + +LF+ +R+ +K +TL +++
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+PD
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744
Query: 309 VTYRTMVR 316
+VR
Sbjct: 745 RLLNHVVR 752
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 1/273 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F V+ G ++ L+ Y G +KA + + M + +P+ Y L+
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNDVVYGTLV 576
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D+ +L +M +GI+P+T+ YN +ID A ++ +M
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+ T + LR + D +++ ++ ++ I T N ++ + E+ +
Sbjct: 637 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + +VTY+I+I + G +++ E +F M++ +P L +VR
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + G+ L ID + L+ + LVD +
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 34/247 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 54 --------KNTP---------DCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P + +N TYSI+++ K FD+ L ++ +
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ + +T NT+I + + E + + P V T + + G ++ E
Sbjct: 671 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P N ++ K + A + + + ++S +T +++D F
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFS 790
Query: 215 RAGDLKQ 221
G ++
Sbjct: 791 SKGTCRE 797
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 3/315 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +A E+ + M D G + + +LSAY + KA S E MK +PD
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA-KVRPD 282
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELT 120
T++I+I K + L + M + RP+ VT+ +++ Y
Sbjct: 283 TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAV 342
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E +P++ + N + A+ G T + GI P + ++ LL+SYG+
Sbjct: 343 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ K V M+K +VTYN +IDA+G G L + +FR M + IKP+ V+
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+C+L+ A + K + +VL + I L+T +N + +Y + + + M+
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 301 QRGCKPDKVTYRTMV 315
++ K D VT+ ++
Sbjct: 523 KKKVKADSVTFTILI 537
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 39/341 (11%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F L+ R G + ++ + MK + + Y+++I+ + D+ + L
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +P+ TY+ LI+A+GRA + + ML P T N + A G+SG
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 148 QI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ +E C +K G+ P + T NI+L +Y + K + E M+ T+
Sbjct: 228 NWREALEVC-KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSER--------------------------------- 233
NI+I + G Q LF MR +R
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 234 ----IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+KP+ V+ +L+ AY G SVL I + I+ D V + CL+++YGR +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ K V +M++ KP+ VTY ++ AY +NG A E
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K Q +A +LF +M ++ C + +FT+++ Y G + ++ E M
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV-AEGL 351
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P++ +Y+ L+ + ++L D+ GI P+ V+Y L+++YGR++ + +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M E +P+V T N + A+G++G + + + + + GI+P++ + LL +
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
++ + V+ Q + YN I ++ A +L++ L++ MR +++K V
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K + S L+ +++ I L + E + + M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLT------------KEGQVTEAESIFNQM 579
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
+ GC+PD + Y +M+ AY+ +
Sbjct: 580 KMAGCEPDVIAYTSMLHAYNAS 601
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 155/399 (38%), Gaps = 69/399 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ +QP KA E+F M E N ++ AL+ AYG +G +A + M+ +P+
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPN 459
Query: 63 VNTYSILIKSC-----------------------------------LKAFAFDKVQALLS 87
V + L+ +C + A +K AL
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAE----------MELTLVK-------------M 124
M + ++ ++VT+ LI R + E + + L K M
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEGQVTEAESIFNQM 579
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
CEPDV L A+ S + + + + ++ GI+P + L+ ++ K G
Sbjct: 580 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 639
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ +M+ M++ +T + + A + K+ L ++M S +
Sbjct: 640 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 699
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVMQQ 301
+ +G +GK E + + I S + ++ + L++ A G + + E VLE M
Sbjct: 700 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE---VLEWMSG 756
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
G +P YR ++ + G ++ EF+ L+ + E+
Sbjct: 757 AGIQPSNQMYRDII----SFGERSAGIEFEPLIRQKLES 791
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 152 MEKCYEKFQSAGIQPSI----NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+E C F+ IQ + + +N+++ + + ++ + MQK+ TY+
Sbjct: 123 IELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYD 182
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I+A GRAG + L M I PS T +L+ A G +G + V + + ++
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V N ++ AY + +++ E+M+ +PD T+ ++ S G + A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 328 KE-FQDLVEKMDETCLAMKRPD 348
+ F + EK E RPD
Sbjct: 303 LDLFNSMREKRAEC-----RPD 319
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 159/335 (47%), Gaps = 9/335 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ Q A L M G A+ S++ LL+A R+G D A + L M+ PD+
Sbjct: 131 RAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPLMEADA-VAPDL 189
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+S LI L+A K AL S + GIRP+ YN I AY ++ + + + L+
Sbjct: 190 VLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLH 249
Query: 124 MLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKA 181
+ D PD + L A G+ + ++ A ++P ++ FNI+L++YG+
Sbjct: 250 DVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQL 309
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER------IK 235
+ M++ ++VTYN ++ +G AG + +LF LM S ++
Sbjct: 310 DLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVR 369
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT +++ +G A + +K GS+++ + S I + V ++ ++ + + +
Sbjct: 370 PNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKL 429
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +++ G + D V Y+TMV AY G+ + +K
Sbjct: 430 FDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRL 464
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 141/311 (45%), Gaps = 9/311 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + +G + +S+ +L+A R G A SL HM+ +PD++ ++I++ +
Sbjct: 247 LLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAY 306
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE--- 130
+ L M G+ P+ VTYNT++ YG A +F E M S +
Sbjct: 307 GQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGT 366
Query: 131 ---PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P+V T N + G + + D ++ Q++GIQP+ T++ +L + KAG ++
Sbjct: 367 VVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRA 426
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + + +++ V Y ++ A+ RAG + Q + RL+R R + + ++
Sbjct: 427 AKLFDKLRESGTEMDPVLYQTMVVAYERAGLVSQSK---RLLRELRHPDQAIPKETAMKI 483
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AG+ E+ + R ++ + D ++ + + + + V + M++ G PD
Sbjct: 484 LASAGRVEEAAWLFRRAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLPD 543
Query: 308 KVTYRTMVRAY 318
T + AY
Sbjct: 544 SETIAVTMNAY 554
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 16/337 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF + G + +++ A ++AY +S L A LL H PD +Y+ +
Sbjct: 207 KALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDAESYAPV 266
Query: 70 IKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ + + +L S M + ++P+ +N +++AYG+ + + + M
Sbjct: 267 LAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLARDADRLFWSMRRAG 326
Query: 129 CEPDVWTMNCTLRAFGNSG----QIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAG 182
P V T N LR +G++G + Y G ++P++ T+N ++ +GKA
Sbjct: 327 VPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIAIHGKAL 386
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+K ++++ MQ VTY+ V+ + +AG L + LF +R + V
Sbjct: 387 EDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQ 446
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++V AY AG + +LR + + D + ++ + GR++ E +
Sbjct: 447 TMVVAYERAGLVSQSKRLLRELRHPDQAIPKETAMKILASAGRVE---EAAWLFRRAVHT 503
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G D +R M+ ++ N + + +VE DE
Sbjct: 504 GEVKDPSVHRAMMALFAKN------RRHRSVVEVFDE 534
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L+++ +A LL +M +G+ + +Y+TL+ A RA + LT + ++
Sbjct: 122 YNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHL-DHALTFLPLM 180
Query: 126 SEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY------ 178
D PD+ + + +G + + ++AGI+P + +N + +Y
Sbjct: 181 EADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLL 240
Query: 179 --------------GKAGHFEKMSAVMEYMQKYHYSWTIVT-----------------YN 207
G A E + V+ + + V+ +N
Sbjct: 241 RDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFN 300
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV-----LR 262
IV++A+G+ + + LF MR + PS VT +++R YG AG G L
Sbjct: 301 IVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAG---LFGEAVHLFGLM 357
Query: 263 FIDNSD----IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ SD + + V +N ++ +G+ + +++ MQ G +P+ VTY T++ +
Sbjct: 358 YSTASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIW 417
Query: 319 STNG-MKNHAKEFQDLVEKMDE 339
G + AK F L E E
Sbjct: 418 VKAGKLDRAAKLFDKLRESGTE 439
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 126/311 (40%), Gaps = 51/311 (16%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD---- 58
G+ A LF +M G + ++ +L YG +GLF +A L M +T
Sbjct: 307 GQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGT 366
Query: 59 -CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+P+V TY+ +I KA DK +L+ M GI+PN VTY+T++
Sbjct: 367 VVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVL------------ 414
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+W +G++D K ++K + +G + + ++ +
Sbjct: 415 --------------SIWV---------KAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVA 451
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y +AG +S +++ + + + AG +++ +LFR +
Sbjct: 452 YERAG---LVSQSKRLLRELRHPDQAIPKETAMKILASAGRVEEAAWLFR----RAVHTG 504
Query: 238 CVTLCSLVRA-YGHAGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMK 293
V S+ RA K + SV+ D + D+ ++AYG+LK F +
Sbjct: 505 EVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLPDSETIAVTMNAYGKLKEFDKAA 564
Query: 294 GVLEVMQQRGC 304
G+ +++ GC
Sbjct: 565 GLYRALREEGC 575
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 6/229 (2%)
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
V YN L+ A RA L++M + D ++ + L A +G +D
Sbjct: 120 VPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPL 179
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
++ + P + F+ L+ +AG K A+ ++ + YN I A+ ++
Sbjct: 180 MEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDL 239
Query: 219 LKQME-YLFRLMRSERIKPSCVTLCSLVRAYGHAGK---PEKLGSVLRFIDNSDIMLDTV 274
L+ + L + ++ + P + ++ A G+ L S +R + + + D
Sbjct: 240 LRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAV--ARVKPDLS 297
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
FN +++AYG+L + + M++ G P VTY TM+R Y G+
Sbjct: 298 VFNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGL 346
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
S +V YN+++ A RAG L+ L MR+ + + +L+ A AG + +
Sbjct: 116 SALLVPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALT 175
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L ++ + D V F+ L+ R + + ++ G +PD Y + AY
Sbjct: 176 FLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYC 235
Query: 320 TNGMKNHAKEF 330
+ + AK
Sbjct: 236 KSDLLRDAKRL 246
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ E A LF M + G + ++ +L+ +G+ GL D+ + E MK+ DC PD
Sbjct: 266 CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA-DCDPD 324
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI K K L +M G++PN VTY+T IDA+ + M E V
Sbjct: 325 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 384
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M P+ +T + A +G + K E+ AGI+ ++ T+ LLD + G
Sbjct: 385 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 444
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ V M + TY ++ F +A +++ + + + M+ + IKP +
Sbjct: 445 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 504
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ + + E+ ++ I S I + V + L+DAY + E +LE M
Sbjct: 505 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 564
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G +VTY ++ +G+ A
Sbjct: 565 GLIATEVTYCALIDGLCKSGLVQEA 589
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E F M +S ALL + G D + + M + V TY+I
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM-GAAGIKRSVFTYNI 260
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K + ++L + M G P+ VTYN+LID +G+ + E +M D
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGKAGHFE 185
C+PDV T N + F + + M K +E + ++ G++P++ T++ +D++ K G +
Sbjct: 321 CDPDVITYNALINCF---CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 377
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ M++ + TY +IDA +AG+L + L + IK + VT +L+
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 437
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G+ ++ V R + N+ + + + LV + + K K +L+ M+++ K
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497
Query: 306 PDKVTYRTMVRAYSTNGMKNHAK 328
PD + Y T++ AK
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAK 520
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 19/333 (5%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C F AL SA G+ ++A M+ P + + L+ K D
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKF-RVFPKPRSCNALLHRLSKVGRGDLS 239
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ DM GI+ + TYN +ID + +M PD+ T N +
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW- 201
G G +D +E+ + A P + T+N L++ + K FE+M E++ + +
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK---FERMPKAFEFLHEMKANGL 356
Query: 202 --TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VTY+ IDAF + G L++ F MR + P+ T SL+ A AG +
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
++ I + I L+ V + L+D GR+K E + V M G P++ TY +V
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMK---EAEEVFRAMLNAGVAPNQETYTALVH 473
Query: 317 AYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ +AK D++++M E C+ +PD
Sbjct: 474 GFIKAKEMEYAK---DILKEMKEKCI---KPDL 500
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 3/303 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C++ ++A E+F+AM++ G N +++TAL+ + ++ + A +L+ MK +
Sbjct: 439 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IK 497
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y ++ ++ + L+ ++ GI N V Y TL+DAY ++ E
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML T + SG + + + G+QP++ + L+D K
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
FE + + M + Y +ID + G+L++ L M ++
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ H+G+ +K ++L + ++ D V + CL+ Y L E + M
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737
Query: 301 QRG 303
+RG
Sbjct: 738 KRG 740
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 44/333 (13%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++A + F M N ++T+L+ A ++G +A L+E + + +
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLN 429
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT-- 120
V TY+ L+ + + + + M G+ PN TY L+ + +AK EME
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK---EMEYAKD 486
Query: 121 LVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++K + E C +PD+ L N +++ + + + +GI + + L+D+Y
Sbjct: 487 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 546
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G + ++E M T VTY +ID ++G +++
Sbjct: 547 KSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQE------------------ 588
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
A H G+ ++G + + + LVD + CF K + + M
Sbjct: 589 -------AMHHFGRMSEIG----------LQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+G PDK+ Y ++ +G A +D
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ ++AH + MV EGC + ++TAL+ + +S + LL + PD+
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR-GFTPDI 214
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I KA + +MS P +TYN+LI Y RA E L K
Sbjct: 215 VTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGK 271
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + C PDV T + AF G++D + +++ + + P + TF L+D G
Sbjct: 272 MVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 331
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E ++E + + TI TYN V+D + +A +++ E L RS P+ VT
Sbjct: 332 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNI 391
Query: 244 LVRAYGHAGKPEKLGSVLRFID--NSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
LV AG+ ++ L+++D NS+ + ++DA R + E
Sbjct: 392 LVAGCCRAGRTDQ---ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M QRG P T+ T+V A A E L+E+M
Sbjct: 449 MIQRGYVPAAATFATVVFALCKAHQPQQAHE---LLEEM 484
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A EL + M+ G AN +++AL+ + D+A +L+E M C P V TY+
Sbjct: 91 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAER-GCAPTVVTYNS 149
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +A D+ + M +G P+ +TY LI + +++ L ++
Sbjct: 150 IITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD+ T + + +G++ +E+ A P+ T+N L+ Y +AG ++
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAI 266
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + +VTY ++ AF + G L LF+ M + ++ P VT SLV
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E +L I +NC+VD Y + + + ++ + RG P+
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
VTY +V G + A ++ D + C
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 419
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 134/308 (43%), Gaps = 4/308 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++T L+ ++ A +L+ M + PD T +++++S D + L+ +
Sbjct: 41 TYTKLVHGLSKARRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEE 99
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +G+ N +TY+ L+D + + E + M C P V T N + F + +
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D E+ + G P I T+ L+ + K+ + ++ + + ++ IVTY+
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VID +AG L+ +F M P+ +T SL+ Y AG ++ +L + +
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D V + L+ A+ ++ + + + M PD VT+ ++V G A
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 336
Query: 329 EFQDLVEK 336
E + + +
Sbjct: 337 ELLEEITR 344
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK 54
L K QP++AHEL + M+ G + A++SAY R+G+ KA L ++
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 11/326 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K E A + M D+G + +F+ L Y + DKA + L + D
Sbjct: 667 LFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN---DKADAALGVYETAVDSGL 723
Query: 62 DVNTY--SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+N Y SIL+ + K +K + +L +G+ PN V YNT+ID Y R +
Sbjct: 724 KMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARM 783
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M + +PD NC +R F G ++ E+ K + G+ PS+ T+NIL+ YG
Sbjct: 784 KIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYG 843
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ F+K +++ M+ +V+Y +I+ + L + + + R M + P+
Sbjct: 844 RKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVR 903
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L+ GK E RF + I L+ V +N L+D AE + +L
Sbjct: 904 IYNMLIDGCCSKGKIE---DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDML 960
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ ++G KPD TY +++ Y G
Sbjct: 961 LEISRKGLKPDVFTYNSLISGYRFAG 986
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 3/332 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +Q + A +LF M+ + ++ L+ Y + G +K+F + E MK + +P
Sbjct: 597 LCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMK-ADNIEP 655
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T++ L+K KA + + +L++M QG P+ T++ L D Y A+ L +
Sbjct: 656 SLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDK-ADAALGV 714
Query: 122 VKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + + + +T + L A GQI+ E+ + + G+ P+ +N ++D Y +
Sbjct: 715 YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ M+K + YN +I F GD++ E M+ + + PS T
Sbjct: 775 KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVET 834
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ YG + +K +L+ ++++ M + V + L++ + E + V M+
Sbjct: 835 YNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 894
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
RG P+ Y ++ + G A F +
Sbjct: 895 DRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 142/333 (42%), Gaps = 32/333 (9%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA 76
AM +G + ++ L+ + G + A + MK P V TY+ILI +
Sbjct: 787 AMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK-LKGVSPSVETYNILIGGYGRK 845
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
+ FDK LL +M G PN V+Y TLI+ + E ++ M P+V
Sbjct: 846 YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N + + G+I+ + E+ GI+ ++ T+N L+D G + ++ + +
Sbjct: 906 NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR 965
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS------CVTLCS------- 243
+ TYN +I + AG++++ L+ M++ IKP+ ++LC+
Sbjct: 966 KGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELT 1025
Query: 244 ------------------LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
++ Y G +K ++ + + I LD +N L+ +
Sbjct: 1026 KKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 1085
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ E++ +++ M+ R +P+ TY +V+ +
Sbjct: 1086 VGKLCEVRSLIDEMKAREMEPEADTYDIIVKGH 1118
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 36/336 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + K +A +LF A+ +EG ++ S T LL ++ F ++ ++ + D +
Sbjct: 491 LLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES-DFR 549
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y I++ +K K L + M I P YN LID
Sbjct: 550 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGL------------ 597
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
C +R Q+ E+ +++ + + PS+ T+N L+D Y K
Sbjct: 598 -----------------CKVR------QMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ EK V E M+ + +++T+N ++ +AG ++ E + M+ + P T
Sbjct: 635 DGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFT 694
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L Y K + V +S + ++ + L++A + + + +L
Sbjct: 695 FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G P++V Y TM+ YS G A+ D +EK
Sbjct: 755 AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEK 790
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 7/335 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLF--DKAFSLLEHMKNTPDCQPDVNTYS 67
KA EL AM GC + SF L++A +SG + A LL+ ++N+ +PD TY+
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS-GLRPDAITYN 301
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+ +C + D + DM +P+ TYN +I YGR + AE E +++ +
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N L AF + +++ Y++ Q G T+N ++ YGK G +
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 188 SAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ + +TY ++ID+ G+A + L M IKP+ T +L+
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK E+ + S D + ++ ++D R + G+ M G P
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y M+ +N + + Q + M+E C
Sbjct: 542 SYTLYELMILGLMK---ENRSDDIQKTIRDMEELC 573
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
+C E+A +F M+ +G +S LL A G ++ + ++E ++ D
Sbjct: 798 AQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ---DMGFK 854
Query: 63 VNTYSILIKSCLKAFA----FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
++ SIL+ L AFA +V+ + S M G P Y +I+ + K + E
Sbjct: 855 ISKSSILL--MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + +M + + ++ N L+ + + Y++ + G++P T+N L+ Y
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF------------ 226
+ E+ +M+ M+ + TY +I AFG+ L+Q E LF
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 227 -----------------------RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
++M++ I+P+ T+ L+ +Y +G P++ VL
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN 1092
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++++ L T+ ++ ++DAY R K + L M++ G +PD + VRA S
Sbjct: 1093 LKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAAS 1148
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 143/354 (40%), Gaps = 57/354 (16%)
Query: 9 EKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
++A E+F+ + + N + A+L GR A + + P V Y+
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIF--TRAEPTVGDRVQVYN 229
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY------------------- 108
++ ++ F K Q L+ M +G P+ +++NTLI+A
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 109 -------------------------GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
G K+F +ME + C+PD+WT N + +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDME-------AHRCQPDLWTYNAMISVY 342
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G G E+ + + + G P T+N LL ++ + + EK+ V + MQK +
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMR--SERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+TYN +I +G+ G L L++ M+ S R P +T L+ + G A + + +++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + I ++ L+ Y + E + M + G KPD + Y M+
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 150/331 (45%), Gaps = 7/331 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP---DCQPDVNTY 66
+A ++F + GC+A+ +++ Y + G + A ++ + C P Y
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MY 755
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I++ K + K ++++ ++ G P+ T+N+L+ AY + + M+
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P V ++N L A G+++ + E+ Q G + S ++ ++LD++ +AG+ +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M+ Y TI Y ++I+ + ++ E + M K S+++
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y +K V + I + + D +N L+ Y R + E +++ M+ G P
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
TY++++ A+ A++ F++L+ K
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 3/248 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K K+ A + M + + ++L Y + K + + +K T +
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET-GLE 959
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI + ++ L+ M G+ P TY +LI A+G+ K + E
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++LS+ + D + ++ +SG EK + ++AGI+P++ T ++L+ SY
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCV 239
+G+ ++ V+ ++ T + Y+ VIDA+ R+ D +E L M+ E ++P
Sbjct: 1080 SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE-MKKEGLEPDHR 1138
Query: 240 TLCSLVRA 247
VRA
Sbjct: 1139 IWTCFVRA 1146
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ EK E++Q M G + ++ ++ YG+ G D A L + MK PD T
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++LI S KA + AL+S+M GI+P TY+ LI Y +A E E T ML
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+PD + L + Y S G PS + +++
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 126/307 (41%), Gaps = 2/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + + G + + ++L +Y SG +AF LLE +K + T ++++
Sbjct: 593 AARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV 652
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVT-YNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
C + +D G + T Y TL+ + +AE + C
Sbjct: 653 LHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGC 712
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT-FNILLDSYGKAGHFEKMS 188
E + + G +T + + ++ G + + + ++++YGK ++K
Sbjct: 713 EASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAE 772
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+V+ +++ + + T+N ++ A+ + G ++ +F M + P+ ++ L+ A
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+L V+ + + + ++DA+ R E+K + M+ G P
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 309 VTYRTMV 315
YR M+
Sbjct: 893 RLYRMMI 899
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 145/366 (39%), Gaps = 45/366 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +A L M+D G Q+++AL+ Y ++G ++A M + +P
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKP 506
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS+++ L+ K L DM + G P+ Y +I + +++ T+
Sbjct: 507 DNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTI 566
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M E C + ++ L G+ D + + + G + +T +L SY
Sbjct: 567 RDM-EELCGMNPLEISSVLV----KGECFDLAARQLKVAITNGYELENDTLLSILGSYSS 621
Query: 181 AGHFEKMSAVMEYMQKYHY-SWTIVTYNIV-----IDAFGRAGD---------------- 218
+G + ++E+++++ S ++T ++ ++ A D
Sbjct: 622 SGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSS 681
Query: 219 ---------------LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+ +F +R + S S+V Y G PE V+
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 264 IDNSDIMLD-TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + + +++AYG+ K + + + V+ ++Q G PD T+ +++ AY+ G
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 323 MKNHAK 328
A+
Sbjct: 802 CYERAR 807
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG--MKNHAKEFQDL 333
+N ++ Y R F++ + +++ M+QRGC PD +++ T++ A +G N A E D+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 334 V 334
V
Sbjct: 288 V 288
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +A L MV +GC + ++ +++ + G D AF+LL M+ +P V Y
Sbjct: 815 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIY 873
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELTLVK 123
+ +I K D L +M T+GIRPN VTY++LI YGR +++ L
Sbjct: 874 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLSD 930
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV+T + + AF G++ EK Y++ I PSI T++ L++ +
Sbjct: 931 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990
Query: 184 FEKMSAVMEYMQKYH-------YSWTI----------------------------VTYNI 208
++ + E+M H Y+ I VTYNI
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I +AGD + +F+ M S+ + P+ +T +L+ GK EK V ++ S
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +N +++ + + + + +G KPD V Y TM+ + G K A
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 938
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+S LI + +K + + L +M + I P+ VTY++LI+ + E +
Sbjct: 939 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+ C PDV T N ++ F +++ + + + G+ + T+NIL+ +A
Sbjct: 999 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M I+TYN ++D + G L++ +F ++ +++P+ T
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ AGK E + + + D V +N ++ + R E + + M++
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ Y T++RA +G + + E
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAEL 1207
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 146/332 (43%), Gaps = 4/332 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L MV+ G + ++ A++ + ++ + AF + ++ +P+V TY+ L+
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALV 335
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + LLSDM + I PN +TY+ L+DA+ + E + +M+ +
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 395
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T + + +ID + ++ S G + ++N L++ + KA E +
Sbjct: 396 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + VTYN +I F +AGD+ + + F M I P T L+
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ EK + + ++ LD V + ++ + E + + +G KPD VT
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 575
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
Y TM+ T G+ + E + L KM + L
Sbjct: 576 YTTMMSGLCTKGLLH---EVEALYTKMKQEGL 604
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 151/326 (46%), Gaps = 4/326 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M+ G + N + ++LL+ Y S +A +L++ M T QP+ T++ LI
Sbjct: 749 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT-GYQPNTVTFNTLI 807
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSEDC 129
+ AL+ M +G +P+ VTY +++ + + ++ L+ KM
Sbjct: 808 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK-RGDTDLAFNLLNKMEQGKL 866
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP V N + +D +++ ++ GI+P++ T++ L+ G + S
Sbjct: 867 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 926
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M + + + T++ +IDAF + G L + E L+ M I PS VT SL+ +
Sbjct: 927 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 986
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ ++ + F+ + D V +N L+ + + K E V M QRG + V
Sbjct: 987 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046
Query: 310 TYRTMVRAYSTNGMKNHAKE-FQDLV 334
TY +++ G + A+E F+++V
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMV 1072
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N + TYSI
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYSI 735
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G PN VT ++L++ Y +K +E + +M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T N + + ++ + G QP + T+ ++++ K G +
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M++ ++ YN +ID + + LF+ M ++ I+P+ VT SL+
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I D F+ L+DA+ + E + + + M +R P
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
VTY +++ + + + AK+ F+ +V K
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFMVSK 1004
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 148/320 (46%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF MV + F LLSA + +D SL + M+ + D+ T++I+I
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME-VLGIRNDLYTFNIVI 230
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
F ++L M G P+ VT +L++ + R ++ + KM+ +
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N + + + +++ +++ + GI+P++ T+ L++ + + + +
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M K + ++TY+ ++DAF + G + + + LF M I P VT SL+
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ ++ + + + + D V +N L++ + + K + + M QRG + VT
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y T+++ + G + A+EF
Sbjct: 471 YNTLIQGFFQAGDVDKAQEF 490
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ MV D + ++++L++ + D+A + E M + C PDV TY+ L
Sbjct: 958 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTL 1016
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K ++ + +MS +G+ NTVTYN LI +A + +M+S+
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L +G+++ +E Q + ++P+I T+NI+++ KAG E
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +V YN +I F R G ++ + LF+ M+ + P+ +L+RA
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196
Query: 250 HAGKPEKLGSVLR 262
G E +++
Sbjct: 1197 RDGDREASAELIK 1209
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 2/275 (0%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L K+ L+ + L SDM P+ V +N L+ A + K + + KM
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D++T N + F Q+ K G +P T L++ + +
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M + Y IV YN +ID+ + + F+ + + I+P+ VT +LV
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++ + +L + I + + ++ L+DA+ + E K + E M + PD
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
VTY +++ + + A + DL+ + + CLA
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLM--VSKGCLA 431
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F+ MV +G N ++ LL ++G +KA + E+++ + +P + TY+I+I
Sbjct: 1064 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMI 1122
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L ++S +G++P+ V YNT+I + R E + +M +
Sbjct: 1123 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 1182
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
P+ N +RA G + + ++ +S G +T ++
Sbjct: 1183 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 1226
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 17/336 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA LFQ M G + ++T L+ ++ ++GL ++A L E M++ C P V TY+
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTA 298
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + LKA + + M G RPN VTY L+D +A ++ K++
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358
Query: 129 ----------CE------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
CE P+V T + + ++D + + S+G +P+ ++
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D + KAG + V M K Y ++ TY +ID + G L + M +
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +++ G+ EK +L ++ + V + L+D G+
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ M ++GC P+ VTYR ++ G+ + A+
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD----- 58
K KQ +A+++F MVD GC N ++ AL+ ++G KAF + + T D
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 364
Query: 59 ----CQ------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
C+ P+V TY L+ KA D LL M + G PN + Y+ LID +
Sbjct: 365 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 424
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+A + ++M P V T + G++D K + P++
Sbjct: 425 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 484
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ ++D + G EK ++ M++ S +VTY +ID G+AG + LF
Sbjct: 485 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 544
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M + P+ VT L+ AG +K +L + + + C + + K
Sbjct: 545 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KS 602
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE M+ G P Y ++ +S G A E
Sbjct: 603 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 645
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 29/348 (8%)
Query: 11 AHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A +++ M+ C N +F L G+ FDKAF L++ M PD +TYS
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRK-GFVPDTSTYS 227
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A +K L +M G+ P+ TY LID++ +A + + + +M S
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P V T + A+ + Q+ + + AG +P+ T+ L+D KAG+ K
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Query: 188 SAVMEYM----------------QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
V + ++ + +VTY ++D +A + L M S
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKC 288
+P+ + +L+ + AGK + V + + + L+D GRL
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD- 466
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
MK VL M + C P+ VTY M+ G A + L+E+
Sbjct: 467 -LAMK-VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 512
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AHEL AM+ GC+ N + AL+ + ++G D A + M P
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC-GYLP 447
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+TY+ LI K D +LS M PN VTY +ID R +E L L
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE-SEKALKL 506
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ++ E C P+V T + G +G+ID + + G P+ T+ +L++
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-----GDLKQME 223
AG +K ++ M++ ++ + Y I F ++ G L++ME
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 126/337 (37%), Gaps = 47/337 (13%)
Query: 36 AYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
A + G + A ++E D + D + +I ++A FD+ + L M
Sbjct: 19 ALCKEGRWADALDMIER----EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 74
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN VTY TL+ + + K + + M++E C P+ N + ++ N K
Sbjct: 75 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134
Query: 156 YEKFQSAGIQPSINTFNILLDS-------------------YGK---------------- 180
+ + G P +NI + S YG+
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 194
Query: 181 ------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
G F+K +++ M + + TY+ VI A +++ LF+ M+ +
Sbjct: 195 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 254
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P T L+ ++ AG E+ + + + V + L+ AY + K +
Sbjct: 255 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 314
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ M GC+P+ VTY +V G N +K F+
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAG--NISKAFE 349
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + + +LF M +GC N ++ L++ +GL DKA LL MK T P
Sbjct: 529 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY--WP 586
Query: 62 D-VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y I+ K+F +L +M + G P Y LID + +A E+ +
Sbjct: 587 KYLQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRL-EIAME 643
Query: 121 LVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L K + E + D ++A + Q++ + Y + G P ++ F L+
Sbjct: 644 LHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 701
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 1/326 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVN 64
+ + + L M + G + +T S++ +L + +A LL M K + C P+V
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ +I + K L +M QG+ P+ VTY++ IDA +A+ + EL L +M
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+S EPD T NC + + GQ + + G+ P I T N + S K G
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + M + +VTY++++ + G + M LF M I L
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ AYG G ++ + + +M D + ++ A+ R+ A+ M G
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
KPD + Y ++++ + +G AKE
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKEL 494
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 8/347 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ +P LF + G + LL + D A ++L H +PD
Sbjct: 131 RAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDT 190
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+YS ++KS + + LL M + G PN V+YNT+I + R ++
Sbjct: 191 ISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLF 250
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PDV T + + A + +D E + S G +P T+N ++ Y
Sbjct: 251 HEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSIL 310
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +++ + + M + I T N + + + G K+ F M ++ KP VT
Sbjct: 311 GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ Y G + ++ ++ + I+ D +N L+DAYG+ E + MQ+
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
RG PD TY T++ A+S G D ++K ++ +PD
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMG------RLADAMDKFNQMIAMGLKPD 471
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 10/339 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ K+ +F+ M G + + + +S+ + G +A + M +
Sbjct: 309 ILGQWKETAG---MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMA-AKGHK 364
Query: 61 PDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD+ TYS+L+ + + D + L + M GI + YN LIDAYG+ M E L
Sbjct: 365 PDLVTYSVLLHGYAAEGYVVDMLN-LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAML 423
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M PD WT + AF G++ D M+K + + + G++P +N L+ +
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK-FNQMIAMGLKPDTIVYNSLIQGF 482
Query: 179 GKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G+ K ++ E M + V +N +I++ + G + + + +F L+ +P
Sbjct: 483 CMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPD 542
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+T SL+ YG GK EK VL + + I D V ++ L+D Y R + +
Sbjct: 543 VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFR 602
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVE 335
M +G KP +TY ++ +G AK+ +++E
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 134/325 (41%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M+ G +T + +L+ + G KA L+ M + +P+ ++ +I
Sbjct: 456 AMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSII 515
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + Q + + G RP+ +T+N+LID YG + L M+S E
Sbjct: 516 NSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIE 575
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T + L + +G+ID + + S G++P+ T+ I+L G +
Sbjct: 576 PDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + I T I++ R + LF+ + + +K + + +++ A
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYK 695
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K E+ + I + ++ + + ++ + E + +M++ GC P
Sbjct: 696 VRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVE 335
++R G + A + V+
Sbjct: 756 LNNIIRVLLEKGEISKAGNYLSKVD 780
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID-TMEK 154
P TYN L+D RA + L + DV N L+ ++ + D +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY--SWTIVTYNIVIDA 212
+ G++P +++ +L S + ++ ++ M K S +V+YN VI
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F R G++ + LF M + + P VT S + A A +K VLR + ++ D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V +NC++ Y L + E G+ M +RG PD T + + + +G A EF D
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 36/254 (14%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + EKA + AM+ G + + +++ALL Y R+G D L M + +P
Sbjct: 554 GLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML-SKGVKPT 612
Query: 63 VNTYSILI-------------KSCLKAFAF----------------------DKVQALLS 87
TY I++ K C + D+ AL
Sbjct: 613 TITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFK 672
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ ++ N NT+IDA + + E + + P+ T + G
Sbjct: 673 KLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEG 732
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ + + + +G PS N ++ + G K + + S T +
Sbjct: 733 SVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTAS 792
Query: 208 IVIDAFGRAGDLKQ 221
+++ F R G ++
Sbjct: 793 LMLSLFSRKGKYRE 806
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/187 (17%), Positives = 72/187 (38%), Gaps = 1/187 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M++ G + + +L R+ D+A +L + + + + ++ + +I
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL-GAMNVKFNIAIINTMI 690
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K ++ L +S G+ PN TY +I + E + M C
Sbjct: 691 DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCA 750
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P +N +R G+I K I +T +++L + + G + +
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKS 810
Query: 191 MEYMQKY 197
+ M ++
Sbjct: 811 LPAMYQF 817
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 11/342 (3%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E ELF+ +V G + ++ L+ + ++G ++A L M ++ C
Sbjct: 90 GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGM-SSRGCV 148
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG--IRPNTVTYNTLIDAYGRAKMFAEME 118
P+V TYS+LI K D+ + L+ +M+ + + PN +TYN+ +D + M AE
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE-A 207
Query: 119 LTLVKMLSED---CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L++ L + PD T + + GQ D E C + + G P++ T+N L+
Sbjct: 208 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALV 265
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ KA E+ A++E M + ++TY++++DAF +A + + L M S
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ VT S++ + + + + + N ++ D V FN L+ + F + +
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
E M + +PD +T+ ++ G A++ DL+ +
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 3/310 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC Q ++A M+ G N ++ AL++ ++ ++A +++E M + P
Sbjct: 235 LCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK-GVTP 291
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS+L+ + KA D+ LL M+++G PN VT+N++ID ++ E
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIA 351
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++ + PD T N + +G + +E+ + +QP + TF L+D KA
Sbjct: 352 LQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKA 411
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E +++ M +VTYN+++ ++G +++ M S P +T
Sbjct: 412 GQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTY 471
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SLV A A + + ++ + + DTV +N LVD + + VLE M
Sbjct: 472 GSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 531
Query: 302 RGCKPDKVTY 311
+G +PD T+
Sbjct: 532 KGHQPDSFTF 541
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 50/369 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDA--NTQSFTALLSAYGRSGLFDKAFSLLEHMKN--- 55
G CK + ++A EL Q M + CD N ++ + L + + +A L+ +++
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219
Query: 56 --TPD-----------CQ------------------PDVNTYSILIKSCLKAFAFDKVQA 84
+PD C+ P+V TY+ L+ KA ++ A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ M +G+ P+ +TY+ L+DA+ +A E L M S C P+V T N +
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339
Query: 145 NSGQIDTMEKCYEKFQSA------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
S ++ E FQ A + P TFNIL+ KAG+FE+ SA+ E M +
Sbjct: 340 KS------DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
++T+ +ID +AG ++ + LM + + P+ VT LV +G+ E+
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPC 453
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
L + +S + +++ + LV A R + ++ ++ G PD VTY +V
Sbjct: 454 EFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513
Query: 319 STNGMKNHA 327
+G A
Sbjct: 514 WKSGKTEQA 522
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+F L++ ++G F++A +L E M + QPDV T+ LI KA + + +L
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMV-AKNMQPDVMTFGALIDGLCKAGQVEAARDILDL 423
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ PN VTYN L+ ++ E L +M+S C P+ T + A + +
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
D + K +S G P T+NIL+D K+G E+ V+E M + T+
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
R+G+L L R++ ++ + P T S++
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 6/290 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ +L + R+G +A + P + TY+ +I K+ L ++
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G P+ VTYNTLID+ +A E M S C P+V T + + G+I
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 150 DTMEKCYEKF--QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ--KYHYSWTIVT 205
D + ++ +S + P+I T+N LD K + +M ++ S VT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
++ +ID + G E M + P+ VT +LV A K E+ +++ +
Sbjct: 228 FSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + D + ++ LVDA+ + E +L M RGC P+ VT+ +++
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 134/315 (42%), Gaps = 36/315 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+AH + ++MVD+G + +++ L+ A+ ++ D+A LL M + C P
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-GCTP 326
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ +I K+ + + + + + P+ VT+N LI +A F +
Sbjct: 327 NVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALF 386
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M++++ +PDV T + +GQ++ + + G+ P++ T+N+L+ K+
Sbjct: 387 EEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKS 446
Query: 182 GHFEKMSAVMEYM-----------------------------------QKYHYSWTIVTY 206
G E+ +E M + + + VTY
Sbjct: 447 GRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTY 506
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI++D ++G +Q + M + +P T + +G +LR +
Sbjct: 507 NILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLA 566
Query: 267 SDIMLDTVFFNCLVD 281
++ D + ++D
Sbjct: 567 KGMLPDATTCSSILD 581
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 19/279 (6%)
Query: 63 VNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELT 120
V Y+I+++S C ++ +M+ G+ P VTYNT+I+ ++ ++ A MEL
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL- 103
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+++ PDV T N + + +G ++ + + S G P++ T+++L++ K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 181 AGHFEKMSAVMEYMQKYHYSW--TIVTYNIVIDAFGRAGDLKQMEYLFRLMR--SERIKP 236
G ++ +++ M + I+TYN +D + + L R +R S R+ P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML-----DTVFFNCLVDAYGRLKCFAE 291
VT +L+ G+ ++ N D++ + V +N LV+ +
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEAC-------NDDMIAGGYVPNVVTYNALVNGLCKADKMER 276
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++E M +G PD +TY +V A+ + A E
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
S ++ YNIV+ + RAG+ + +FR M + + P+ VT +++ K +LG
Sbjct: 42 SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL---CKSNELG 98
Query: 259 SVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + D V +N L+D+ + E + + M RGC P+ VTY ++
Sbjct: 99 AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158
Query: 316 RAYSTNGMKNHAKEF-QDLVEK 336
G + A+E Q++ K
Sbjct: 159 NGLCKVGRIDEARELIQEMTRK 180
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 19/355 (5%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A EL + MV++G N S++ L++ SG + AFS L M C
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR-GCH 313
Query: 61 PDVNTYSILIKSC-LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P++ T S L+K C L+ FD + + G++PN V YNTL+ + +
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M C P++ T + F G +D + K ++G P++ + ++++
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSC 238
+ F++ +++E M K + + ++ T+N I AG L E +FR M + R P+
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV--- 295
VT L+ A + E+ + R I + + +N L+ C A + G+
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG----SCNAGLPGIALQ 549
Query: 296 -LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK-RPD 348
+ M G PD++T ++ AY G A + DLV +C K RPD
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV-----SCGRRKWRPD 599
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%), Gaps = 26/325 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A +L M ++GC + S+T ++S+ GL + L E +P
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF------EP 244
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT- 120
V+ Y+ LI K + L+ +M +GI PN ++Y+TLI+ + ++EL
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS---GQIELAF 301
Query: 121 --LVKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +ML C P+++T++ ++ F D ++ + + G+QP++ +N L+
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G+ K +V +M++ S I TY +I+ F + G L Y++ M + P+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRL----KCFA 290
V ++V A K ++ S++ + + FN + GRL K F
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMV 315
+M+ QQ C P+ VTY ++
Sbjct: 482 QME------QQHRCPPNIVTYNELL 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 5/312 (1%)
Query: 11 AHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A +L+ M+ G N ++ L+ + G KA S+ HM+ C P++ TY L
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI-GCSPNIRTYGSL 393
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K + D + + M T G PN V Y +++A R F E E + M E+C
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P V T N ++ ++G++D EK + + Q P+I T+N LLD KA E+
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + W+ TYN ++ AG L M + P +T+ ++ AY
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 249 GHAGKPEKLGSVLRFID--NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GK E+ +L + D + + ++ R C + +LE M G P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 307 DKVTYRTMVRAY 318
T+ ++ +
Sbjct: 634 SIATWSVLINCF 645
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 7/317 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q + L Q M +G + F +++S Y + GL ++A + +K C P V Y
Sbjct: 91 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF-GCDPSVKIY 149
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ ++ + L + + DM G PN TYN L+ A + + LV+M +
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ C PD + + + G + + E+F +P ++ +N L++ K ++
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKG 264
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+M M + S +++Y+ +I+ +G ++ M P+ TL SLV+
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 247 AYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G + L + I + + V +N LV + + V M++ GC
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 306 PDKVTYRTMVRAYSTNG 322
P+ TY +++ ++ G
Sbjct: 385 PNIRTYGSLINGFAKRG 401
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 146/346 (42%), Gaps = 18/346 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E+F + + GCD + + + +L + + MK +P+V TY++
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD-GFEPNVFTYNV 186
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+K+ K D + LL +MS +G P+ V+Y T+I + + E + L+E
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAER 241
Query: 129 CEPDVWTMNCTLRAFGNS----GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
EP V N + G + M + EK GI P++ +++ L++ +G
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEK----GISPNVISYSTLINVLCNSGQI 297
Query: 185 EKMSAVMEYMQKYHYSWTIVTYN-IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E + + M K I T + +V F R ++ +++R ++P+ V +
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV+ + G K SV ++ + + L++ + + + M G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
C P+ V Y MV A + + KE + L+E M + A P F
Sbjct: 418 CCPNVVVYTNMVEALCRH---SKFKEAESLIEIMSKENCAPSVPTF 460
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L + M E C + +F A + +G D A + M+ C P++ TY+
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSE 127
L+ KA ++ L ++ +G+ ++ TYNTL+ A + + L LV KM+ +
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL-PGIALQLVGKMMVD 557
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG---IQPSINTFNILLDSYGKAGHF 184
PD TMN + A+ G+ + + + S G +P + ++ ++ ++
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCR 616
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
E ++E M +I T++++I+ F
Sbjct: 617 EDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 100/254 (39%), Gaps = 7/254 (2%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
T+ ++I+ D VQ LL M QG + + ++I Y R AE + +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY-RQVGLAERAVEMFYR 136
Query: 125 LSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ E C+P V N L +I + Y + G +P++ T+N+LL + K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++ M V+Y VI + G +K+ L +ER +P +
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNA 251
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ + ++R + I + + ++ L++ L M +RG
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 304 CKPDKVTYRTMVRA 317
C P+ T ++V+
Sbjct: 312 CHPNIYTLSSLVKG 325
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 7/334 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ ++MV G + T+L+ + + G KA ++E ++++ PDV TY++
Sbjct: 101 EEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDS-GAVPDVITYNV 159
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + + LL+DM +G P+ VT+N LI+ R + L KM
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ + N L F +++ + K S G P I T+N LL + K G +
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ + S ++TYN VID + G Q L MR++ +KP +T SLV
Sbjct: 280 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL 339
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK ++ ++ + + + +N ++ + + L M QRGCKP +
Sbjct: 340 SREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTE 399
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+Y ++ + G+ A E ++E CL
Sbjct: 400 ASYTILIEGLAYEGLAKEALEL------LNELCL 427
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 39/238 (16%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A E M GC + ++ LL+A + G D A LL + ++ C
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL-SSKGCS 291
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY+ +I K D+ LL +M +G++P+ +TY++L+ R
Sbjct: 292 PVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSR---------- 341
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
G++D K + + G++P+ T+N ++ K
Sbjct: 342 -------------------------EGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPS 237
A ++ + YM + T +Y I+I+ G K+ +E L L +K S
Sbjct: 377 ARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKS 434
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L +G+++ + E G P I L+ + K G K + +ME ++
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
++TYN++I G E L M PS VT L+ G +
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
VL + +++ +N L+ + + K L M RGC PD VTY T++
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 317 AYSTNGMKNHAKEF 330
A +G + A E
Sbjct: 268 ALCKDGKVDAAVEL 281
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +L M +G + ++++L+ R G D+A H +P
Sbjct: 304 LSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFF-HDLEVLGVKP 362
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ ++ KA D+ L+ M +G +P +Y LI+ + E
Sbjct: 363 NAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA---- 418
Query: 122 VKMLSEDC 129
+++L+E C
Sbjct: 419 LELLNELC 426
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A LF M +G A+ ++ L+ + +G +D LL M
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-IS 330
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T+S+LI S +K + LL +M +GI PNT+TYN+LID + + E
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M+S+ C+PD+ T N + + + +ID + + + G+ + T+N L+ + +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E + + M IV+Y I++D G+L++ +F + +++
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ +A K + + + + LD +N ++ R ++ + M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ G PD++TY ++RA+ + + A +L+E+M
Sbjct: 571 EEGHAPDELTYNILIRAHLGD---DDATTAAELIEEM 604
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 154/336 (45%), Gaps = 6/336 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+C++ A ++ G + +T F LL+ +A L++ M +P +
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH-KPTL 193
Query: 64 NTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA-EMELTL 121
T + L+ CL D V L+ M G +PN VTY +++ ++ A MEL L
Sbjct: 194 ITLNTLVNGLCLNGKVSDAV-VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL-L 251
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + + D + + G +D + + + G + I T+N L+ + A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + ++ M K S +VT++++ID+F + G L++ + L + M I P+ +T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ + + E+ ++ + + D + FN L++ Y + + + M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
RG + VTY T+V+ + +G AK+ FQ++V +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 135/323 (41%), Gaps = 36/323 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L MV+ G N ++ +L+ +SG A LL M+ + + D YSI+I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGL 273
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K + D L ++M +G + + +TYNTLI
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG--------------------------- 306
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
F N+G+ D K I P++ TF++L+DS+ K G + +++
Sbjct: 307 --------GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + + +TYN +ID F + L++ + LM S+ P +T L+ Y A +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ + R + ++ +TV +N LV + + K + + M R +PD V+Y+
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 314 MVRAYSTNGMKNHAKEFQDLVEK 336
++ NG A E +EK
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEK 501
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 3/318 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K KQ E L + M +G + + + +++ + R AFS + + +P
Sbjct: 98 IAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL-GYEP 156
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D ++ L+ CL+ + ++ L+ M G +P +T NTL++ ++ +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALE-LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M+ +P+ T L SGQ + K + I+ ++I++D K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M+ + I+TYN +I F AG L R M +I P+ VT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ ++ GK + +L+ + I +T+ +N L+D + + E ++++M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 301 QRGCKPDKVTYRTMVRAY 318
+GC PD +T+ ++ Y
Sbjct: 396 SKGCDPDIMTFNILINGY 413
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 35/309 (11%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI-------------------------- 94
P V ++ L + K ++ V AL M ++GI
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 95 ---------RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
P+TV +NTL++ +E + +M+ +P + T+N +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G++ ++ G QP+ T+ +L+ K+G ++ M++ + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+I+ID + G L LF M + K +T +L+ + +AG+ + +LR +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I + V F+ L+D++ + E +L+ M QRG P+ +TY +++ +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 326 HAKEFQDLV 334
A + DL+
Sbjct: 386 EAIQMVDLM 394
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L + M+ G NT ++ +L+ + + ++A +++ M + C PD+ T++IL
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI-SKGCDPDIMTFNIL 409
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I KA D L +MS +G+ NTVTYNTL+ + ++ + +M+S
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA--------------------------- 162
PD+ + L ++G+++ + + K + +
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 163 --------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
G++ +NI++ + K + M + ++ +TYNI+I A
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
D L M+S P+ V+ +V +G+ +K
Sbjct: 590 GDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELDK 630
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +LFQ MV + S+ LL +G +KA + ++ + + D+ Y I
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK-MELDIGIYMI 513
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A D L + +G++ + YN +I R ++ ++ KM E
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD T N +RA T + E+ +S+G ++T ++++ +G +K
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDK 630
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--GLFDKAFSLLEHMKNTPDCQ 60
G CK + E +VD+G N +++ L+S R G+ +A L + +
Sbjct: 124 GLCKNG-RVDEARMLIVDKGFSPNVITYSTLISGLCRELRGV-SEALKLFGSVLKQ-GYE 180
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI LK ++ L S + G+ P+ +TY ID +A + L
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + C PDV + N + ++D E ++ G P+ +FN L+ +
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA---GDLKQMEYLFRLMRSERIKPS 237
AG ++K + M K T+VTYNI++D +A G +K+ LF M + P
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +L+ G AGK + +L ++ + + +N L+ L+ E +
Sbjct: 361 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFV 420
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M ++GC PD +TY T++ A
Sbjct: 421 AMVEKGCVPDTITYGTIISA 440
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 15/296 (5%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++ ALLS G A +L E M PDV TY+ L+ K D+ +
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQALYERMIKA-GYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+G P+ VTYN LI+ + +A E + L +M+SE+ PDV T N +
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ------KYHY 199
+G++D G P++ T++ L+ +G ++ V E ++ K Y
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLI-----SGLCRELRGVSEALKLFGSVLKQGY 179
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ TYNI+ID + + + LF + ++P +T + AG+ E
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+L+ +D + D V N +++ + K E + +L M+ +GC P+ +++ T++
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 16/342 (4%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E +A ++F V G + ++ AL++ + ++ D+A +L+ M + +
Sbjct: 54 GFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV-SENLV 112
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ L+ K D+ + L+ D +G PN +TY+TLI R L
Sbjct: 113 PDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALK 169
Query: 121 LV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +L + EP+V T N + +++ + + G++P T+ + +D
Sbjct: 170 LFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 229
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG E +++ M + +V++N VI+ + + + E L M ++ P+ +
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY------GRLKCFAEMK 293
+ +L+ AGK +K + + + + V +N LVD GR+K E
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK---EAI 346
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ + M ++G PD VTY ++ G + A+ +E
Sbjct: 347 TLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N L N G++ + YE+ AG P + T+N LL + K G ++ +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ K + +VTYN +I+ F +A L + + + + M SE + P VT SLV
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ------QRGC 304
G+ ++ I + + + ++ L+ R E++GV E ++ ++G
Sbjct: 128 NGRVDE---ARMLIVDKGFSPNVITYSTLISGLCR-----ELRGVSEALKLFGSVLKQGY 179
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+P+ TY ++ N A E F LV+
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 16/241 (6%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G PN +TYN L+ ++ + +M+ PDV T N L F G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D K ++ G P + T+N L++ + KA ++ +++ M + +VTYN
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT-------LCSLVRAYGHAGKPEKLGSVL 261
+++ + G + + L+ + P+ +T LC +R A K GSVL
Sbjct: 121 LVNGLCKNGRVDEARM---LIVDKGFSPNVITYSTLISGLCRELRGVSEALK--LFGSVL 175
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ ++ +N L+D + E + + + G +PD +TY +
Sbjct: 176 KQGYEPEVPT----YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231
Query: 322 G 322
G
Sbjct: 232 G 232
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 35/166 (21%)
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G P+ T+N LL G A+ E M K YS +VTYN ++ F + G+L +
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+F G+V R + D V +N L++
Sbjct: 65 LKIFD------------------------------GAVKR-----GFVPDVVTYNALING 89
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + E + +L+ M PD VTY ++V NG + A+
Sbjct: 90 FCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEAR 135
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 137/330 (41%), Gaps = 35/330 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ EKA EL M GC + ++ L+ + +S KA + + +K++ C PDV TY
Sbjct: 221 KAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTY 280
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I KA + LL DM GI P VT+N L+D Y +A E KM+S
Sbjct: 281 TSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMIS 340
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + GQ++ + +E+ + G+ P+ T++IL+++ K K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLK 400
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ + YN VID F +AG + + + M ++ KP +T L+
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILI- 459
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GH K GR+ E + M GC P
Sbjct: 460 -IGHCMK------------------------------GRM---FEAVSIFHKMVAIGCSP 485
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
DK+T +++ GM A + K
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHLNQIAHK 515
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 17/316 (5%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L Q+ EGC S L R + A L E C D T++ILI+
Sbjct: 161 LLQSYEVEGCCMVVNSLLNTLVKLDR---VEDAMKLFEEHLRFQSCN-DTKTFNILIRGL 216
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLS 126
+K LL MS G P+ VTYNTLI + ++ +MF +++ S
Sbjct: 217 CGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKS------S 270
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + +G++ + GI P+ TFN+L+D Y KAG
Sbjct: 271 SGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHT 330
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M + +VT+ +ID + R G + Q L+ M + + P+ T L+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A + K +L + + DI+ +N ++D + + E ++E M+++ CKP
Sbjct: 391 ALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKP 450
Query: 307 DKVTYRTMVRAYSTNG 322
DK+T+ ++ + G
Sbjct: 451 DKITFTILIIGHCMKG 466
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMELTLVK 123
TY++L +S KA D + M + GI PN+ L+ ++ + K+ L L
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
E C +N L +++ K +E +FQS TFNIL+
Sbjct: 165 YEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCN---DTKTFNILIRGLCG 218
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCV 239
G EK ++ M + IVTYN +I F ++ +LK+ +F ++S P V
Sbjct: 219 VGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVV 278
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVL 296
T S++ Y AGK ++ +L + I V FN LVD Y G + E++G
Sbjct: 279 TYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRG-- 336
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M GC PD VT+ +++ Y G N
Sbjct: 337 -KMISFGCFPDVVTFTSLIDGYCRVGQVNQG 366
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A L M+ G +F L+ Y ++G A + M + C
Sbjct: 286 GYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISF-GCF 344
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + ++ L +M+ +G+ PN TY+ LI+A + +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAREL 404
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ S+D P + N + F +G+++ E+ + +P TF IL+ +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
G + ++ M S +T + ++ +AG K+ +L ++ +I
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQI 518
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
WT N R+ +G D + +E +S GI P+ L+ S+ + G +A++
Sbjct: 104 WTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL-- 161
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC---VTLCSLVRAYGH 250
+Q Y + N +++ + L ++E +L SC T L+R
Sbjct: 162 LQSYEVEGCCMVVNSLLNTLVK---LDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCG 218
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPD 307
GK EK +L + + D V +N L+ + LK EM +V GC PD
Sbjct: 219 VGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD--DVKSSSGCSPD 276
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQD 332
VTY +M+ Y G A D
Sbjct: 277 VVTYTSMISGYCKAGKMQEASVLLD 301
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+ S T+N+L S KAG + + E M+ S ++ +F G L
Sbjct: 99 IRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCAT 158
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV----LRFIDNSDIMLDTVFFNCL 279
L L++S ++ C+ + SL+ + E + LRF + DT FN L
Sbjct: 159 AL--LLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCN----DTKTFNIL 212
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDL 333
+ + + +L M GC PD VTY T+++ + +N +K + F D+
Sbjct: 213 IRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV 267
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 19/326 (5%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F+ G + S+TAL+ +G+ ++K + M+ C PD+ ++LI
Sbjct: 164 AMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRN-RCPPDLKLCTVLI 222
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ ++ + QG++P+ + Y L+ AY + ++ E E TL ML
Sbjct: 223 STYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIV 282
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D + A+G +G D + K E +++G++ S +N L++ + KA EK AV
Sbjct: 283 DD-RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAV 341
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ MQ +TY V++A+ R E + M+ I+P V+ L+ AY
Sbjct: 342 LQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCR 401
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV------------ 298
AG+ +LR + N+ +N ++ Y K ++ + + +
Sbjct: 402 AGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAAE 461
Query: 299 -----MQQRGCKPDKVTYRTMVRAYS 319
MQQ GCKP+ VTY+ +++AY+
Sbjct: 462 DCYIRMQQLGCKPNAVTYKILLKAYT 487
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 7/271 (2%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ + +C+K + G++P+ V+Y LI +G+ K + ++
Sbjct: 145 VKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFS 204
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PD+ + +GN G E + Q+ G+QP + L+ +Y + G
Sbjct: 205 RMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEG 264
Query: 183 HFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+E+ + M IV Y ++ A+G+AG + + M++ ++ S
Sbjct: 265 LWEEAEKTLSDM----LDVGIVDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTT 320
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+L+ + A PEK +VL+ + D + + +++AY R K + ++ M
Sbjct: 321 LYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEM 380
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G +P V+Y ++ AY G A+
Sbjct: 381 KRAGIQPGPVSYGVLISAYCRAGRLGDAERI 411
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + PEKA + Q M +GC + ++T+++ AY R+ A S++ MK QP
Sbjct: 331 KAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRA-GIQPGP 389
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+Y +LI + +A + +L M +P YN +I Y AKM ++ E
Sbjct: 390 VSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQT 449
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M +C LR D E CY + Q G +P+ T+ ILL +Y
Sbjct: 450 M-----------QDCGLRP-------DAAEDCYIRMQQLGCKPNAVTYKILLKAY 486
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+++F+ AG++P + ++ L+ +GK + K++ V MQ+ + ++I +G
Sbjct: 168 FKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGN 227
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI-MLDTV 274
G E + +++ ++P + +LV AY G E+ L D D+ ++D
Sbjct: 228 GGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLS--DMLDVGIVDDR 285
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ LV AYG+ + +LE M+ G + Y T++ +S A+ L+
Sbjct: 286 PYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLM 345
Query: 335 E 335
+
Sbjct: 346 Q 346
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 3/164 (1%)
Query: 175 LDSYGKAGHFEKMSAVM--EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L S+G F + A +Y++ ++ YN + + G ++ +F+
Sbjct: 115 LRSWGSRAAFTIVQATSSSDYLEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGA 174
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+KP V+ +L++ +G K+ V + + D L+ YG
Sbjct: 175 GLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLA 234
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ ++ Q +G +PD + Y +V AY+ G+ A K D+++
Sbjct: 235 ESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLD 278
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 159/338 (47%), Gaps = 7/338 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G C++ A ++++ MV EG + ++++AL+ A G+ + LL+ M++ +P+
Sbjct: 206 GFCRE---ALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL-GLRPN 261
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T++I I+ +A D+ +L M G P+ VTY LIDA A + +
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFL 321
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM + +PD T L F + G +D +++ + + ++ G P + TF IL+D+ K G
Sbjct: 322 KMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ ++ M+K + + TYN +I R L + LF M S ++ + T
Sbjct: 382 KVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYI 441
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+ YG +G+ K + + I+ + V N + + E K +++
Sbjct: 442 LFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC 501
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
G PD +TY ++R Y G + A + L+ +M+E
Sbjct: 502 GLAPDAITYNILMRCYGKAGRVDDAIK---LLSEMEEN 536
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 2/335 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E L Q M G N +FT + GR+G D+A+ +L+ M + C P
Sbjct: 237 LGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDA-GCGP 295
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY++LI + A + + L M +P+ VTY TL+D + ++
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M ++ PDV T + A G++D + + G+ P+++T+N L+ +
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + M+ T TY + ID +G++G+ + F M++ I P+ V
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ + + G+ E+ + + D + +N L+ YG+ + +L M++
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535
Query: 302 RGCKPDKVTYRTMVRA-YSTNGMKNHAKEFQDLVE 335
GC P+ V +++ Y + + K FQ + E
Sbjct: 536 NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 1/315 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E + M +G + +FT L+ A + G D+AF L+ MK P+++TY+ LI
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ-GVAPNLHTYNTLICG 411
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
L+ D+ L + M + G+ TY ID YG++ + T KM + P+
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N +L + G+++ ++ + + G+ P T+NIL+ YGKAG + ++
Sbjct: 472 IVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLS 531
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M++ +V N +ID +A + + +F+ M+ ++ P+ VT +L+ G G
Sbjct: 532 EMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEG 591
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++ ++ + + D +T+ FN L+D + +L M + C PD +TY
Sbjct: 592 RVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYN 651
Query: 313 TMVRAYSTNGMKNHA 327
T++ N+A
Sbjct: 652 TVIYGLIKENRVNYA 666
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E A LF M + GC + ++ L A G+SG + F L E M C+P
Sbjct: 798 LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR-GCKP 856
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T++I+I +K+ + DK L D+ + P TY LID + E +
Sbjct: 857 NTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFF 916
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ML C P+ N + FG G ++T + + + GI+P + +++I++D
Sbjct: 917 EEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMV 976
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + E ++ +V YN++I+ GR+ +++ LF MR+ I P T
Sbjct: 977 GKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTY 1036
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ G AG E+ G + + + + +N L+ + V + M
Sbjct: 1037 NALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMV 1096
Query: 302 RGCKPDKVTY 311
GC+P+ T+
Sbjct: 1097 GGCRPNTGTF 1106
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 143/327 (43%), Gaps = 1/327 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++A+ + + M D GC + ++T L+ A +G + A L MK + +
Sbjct: 271 ILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH-K 329
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY L+ D ++ S+M G P+ VT+ LIDA + E T
Sbjct: 330 PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGT 389
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + P++ T N + ++D + + +S G++ + T+ + +D YGK
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G K E M+ IV N + + G L++ + F ++ + P +T
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+R YG AG+ + +L ++ + + V N L+D + E + + M+
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ P VTY T++ G A
Sbjct: 570 EMKLAPTVVTYNTLLAGLGKEGRVQEA 596
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 1/274 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + Y+ LI LKA + L M G P+ TYN +DA G++ E+
Sbjct: 786 PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML C+P+ T N + S +D Y S P+ T+ L+D K
Sbjct: 846 YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ E M Y YNI+++ FG+ GD++ LFR M E I+P +
Sbjct: 906 LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+V GK + + S + D V +N +++ GR + E + + M+
Sbjct: 966 YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1025
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
RG PD TY ++ GM A K +++L
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEEL 1059
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 11 AHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
A+ +F + C + +++ +L+ ++ L + A+ L MKN C PDV TY++
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA-GCTPDVFTYNLF 829
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + K+ ++ L +M +G +PNT+T+N +I ++ + ++S D
Sbjct: 830 LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P WT + G+++ ++ +E+ G P+ +NIL++ +GK G E
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M K + +Y+I++D G + + F ++ + P V ++ G
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ + E+ S+ + N I D +N L+ G E + E +Q +G +P+
Sbjct: 1010 RSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069
Query: 310 TYRTMVRAYSTNGMKNHA 327
TY ++R +S +G + A
Sbjct: 1070 TYNALIRGHSMSGNPDRA 1087
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+NTY + K + L M G N +Y LI ++ E
Sbjct: 157 INTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYR 216
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+SE +P + T + + A G I+T+ ++ +S G++P+I TF I + G+AG
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ M +VTY ++IDA AG L + LF M++ KP VT
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ + G + + ++ + D V F L+DA ++ E G L+VM+++
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396
Query: 303 GCKPDKVTYRTMV 315
G P+ TY T++
Sbjct: 397 GVAPNLHTYNTLI 409
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 7/300 (2%)
Query: 37 YGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI--LIKSCLKAFAFDKVQALLSDMSTQGI 94
Y R GL + +L E M+ +N YS LI LK+ + + M ++GI
Sbjct: 168 YIRGGLREAPVAL-EKMRKVGFV---LNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGI 223
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ TY+ L+ A G+ + + L +M S P+++T +R G +G+ID
Sbjct: 224 KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYG 283
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
++ AG P + T+ +L+D+ AG + M+ + VTY ++D F
Sbjct: 284 ILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFS 343
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
GDL ++ + M ++ P VT L+ A GK ++ L + + +
Sbjct: 344 DHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLH 403
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+N L+ RL E + M+ G + TY + Y +G A K F+ +
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKM 463
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 2/253 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + KA + F+ M G N + A L + G ++A +K PD
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC-GLAPD 506
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+IL++ KA D LLS+M G P V N+LID +A E
Sbjct: 507 AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ 566
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M P V T N L G G++ ++ + P+ +FN LLD K G
Sbjct: 567 RMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNG 626
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ M + + ++TYN VI + + +LF M+ + I P VTLC
Sbjct: 627 EVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLC 685
Query: 243 SLVRAYGHAGKPE 255
+L+ G+ E
Sbjct: 686 TLLPGVIKDGRIE 698
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 142/358 (39%), Gaps = 39/358 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A LF+ M+ + C NT SF LL ++G D A +L M +C P
Sbjct: 587 LGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM-NCFP 645
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----------DAYGRA 111
DV TY+ +I +K + L M + I P+ VT TL+ DA+ A
Sbjct: 646 DVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVA 704
Query: 112 KMFA---------------------EMELTLVKMLSED------CEPDVWTMNCTLRAFG 144
K F E E+ + +E CE D +
Sbjct: 705 KEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCK 764
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ +D + +S I PS+ +N L+D KA E + M+ + +
Sbjct: 765 HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF 824
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN+ +DA G++G +K++ L+ M KP+ +T ++ + +K + +
Sbjct: 825 TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ D + L+D +L E K E M GC P+ Y ++ + G
Sbjct: 885 MSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++ +L++ M+ GC NT + ++ +S DKA L + + D P
Sbjct: 833 LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLM-SGDFSP 891
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMF 114
TY LI LK ++ + +M G PN YN L++ +G+ ++F
Sbjct: 892 TPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELF 951
Query: 115 AEMELTLVK------MLSEDC----------------------EPDVWTMNCTLRAFGNS 146
M ++ + DC +PD+ N + G S
Sbjct: 952 RRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+++ +++ ++ GI P + T+N L+ + G AG E+ + E +Q + TY
Sbjct: 1012 QRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
N +I +G+ + +++ M +P+ T L
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L +++ M + Q I+ SINT+ + G + +E M
Sbjct: 124 TCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKM 183
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+K + +Y +I ++G ++ ++R M SE IKPS T +L+ A G
Sbjct: 184 RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDI 243
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E + +L+ +++ + + F + GR E G+L+ M GC PD VTY +
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVL 303
Query: 315 VRAYSTNGMKNHAKEF 330
+ A G N+AKE
Sbjct: 304 IDALCNAGKLNNAKEL 319
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%)
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
EK + G + ++ L+ K+G + V M ++ TY+ ++ A G+
Sbjct: 181 EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKR 240
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
D++ + L + M S ++P+ T +R G AGK ++ +L+ +D++ D V +
Sbjct: 241 RDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTY 300
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
L+DA K + M+ KPD+VTY T++ +S +G + KEF +E
Sbjct: 301 TVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEME 359
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 5/267 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F ++L+S+M T G+ PNT +Y+
Sbjct: 21 YSKAISIFSRLKRS-GFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYS 79
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 80 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 139
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 140 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 199
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M++ I+P+ +T +++ +G GK ++ + + + +S + +D V + ++ A
Sbjct: 200 NNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVA 259
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKV 309
Y R A K +L ++ +PD +
Sbjct: 260 YERAGLVAHAKRLLHELK----RPDNI 282
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 138/287 (48%), Gaps = 10/287 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ YS LI+ K + K ++ S + G P+ V YN +I+ +G+AK+F + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ + + L + + + + + + + T NI++D YG+
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ + M+K +V+YN ++ +G A + +LFRLM+ + I+ + VT
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S++ YG + EK ++++ + N I +++ ++ ++ +G++ + + ++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G D+V Y+TM+ AY G+ HAK +KRPD
Sbjct: 244 SGVDIDQVLYQTMIVAYERAGLVAHAKRLLH----------ELKRPD 280
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 5/319 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK K A L M G NT S++ LL+ Y + F +A S+ M+ C
Sbjct: 49 VFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIK-CL 107
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ T +I+I + + L M GI PN V+YNTL+ YG A++F E
Sbjct: 108 LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 167
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M ++ E +V T N + +G + + + ++ Q+ GI+P+ T++ ++ +GK
Sbjct: 168 FRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGK 227
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + + + ++ V Y +I A+ RAG + + L ++ +P +
Sbjct: 228 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AG+ E+ V R ++ + D F ++ + + K + + V + M+
Sbjct: 284 RDIAIHILAGAGRIEEATWVFRQAIDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMR 343
Query: 301 QRGCKPDKVTYRTMVRAYS 319
G PD ++ AY
Sbjct: 344 GLGYFPDSNVIALVLNAYG 362
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 179
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M +GI PN++TY+T+I +G+
Sbjct: 180 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV----------- 228
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G++D ++K +S+G+ + ++ +Y +AG
Sbjct: 229 ------------------------GKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAG 264
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ + +I I AG +++ ++FR + I V
Sbjct: 265 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRIEEATWVFR----QAIDAGXVKDI 316
Query: 243 SLVRAYGHA-GKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
++ H K +K G+V+ D D+ +++AYG+L F + V
Sbjct: 317 TVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYME 376
Query: 299 MQQRGC 304
MQ+ GC
Sbjct: 377 MQEVGC 382
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 1/312 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ + G + F+ ++ Y ++G ++A S+LE M D PDV + +
Sbjct: 578 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 637
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++ K DK+Q L + GI + YN +I+ RA E+ T +M+
Sbjct: 638 LRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMIRYGF 697
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N L +G + + + + + G+ I ++N ++ +YGK F MS+
Sbjct: 698 TPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKNKDFTNMSS 756
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ MQ +S ++ YN ++DA+G+ +++ + + M+ P T ++ YG
Sbjct: 757 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 816
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G +++ VL+ + S + D +N L+ AYG E G+++ M+ + PDKV
Sbjct: 817 EQGWIDEVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKV 876
Query: 310 TYRTMVRAYSTN 321
TY +V A N
Sbjct: 877 TYTNLVTALRKN 888
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 146/339 (43%), Gaps = 21/339 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA E+ M + +++ +L+AY + G ++A S+L M+ P++ Y+
Sbjct: 298 EKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISME-AAGFAPNIIAYNT 356
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + ++L +S G+ P+ +Y ++I+ +GRA + E ++
Sbjct: 357 LITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCG 416
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYGKAGHFEKM 187
+P+ + + G D K E S G Q PSI I+L +Y K G + +
Sbjct: 417 YKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSI--LGIILQAYEKVGKIDVV 474
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC-------VT 240
+++ H +++I++ A+ + G ++ L+R ++ + S +
Sbjct: 475 PYLLKGSFHNHIRLNQTSFSILVMAYIKHG---MVDDCLALLREKKWRDSAFESHLYHLL 531
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+CS +G+ + SD ++ + ++D Y + F E + + ++
Sbjct: 532 ICSC----KESGQLTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYLNLK 587
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G D++ + +VR Y G +E ++E MDE
Sbjct: 588 SSGVVLDRIGFSIVVRMYVKAG---SLEEACSVLEIMDE 623
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N + A G + K ++ G++P++ T +L+ Y K + ++ +M+K
Sbjct: 216 NTVIYACTKKGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRK 275
Query: 197 YHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ IV Y+ +I + R ++ E + LM+ +R++ ++ AY GK
Sbjct: 276 FE----IVCESAYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGK 331
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
E+ SVL ++ + + + +N L+ YG++ K + + G +PD+ +YR+
Sbjct: 332 MEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRS 391
Query: 314 MVRAY 318
M+ +
Sbjct: 392 MIEGW 396
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQPDVNTYSIL 69
A + FQ M++ G N + L+ Y ++ D+A HM+ C+ + YS +
Sbjct: 231 ASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVCE---SAYSSM 287
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + ++K + +++ M +R + +++AY + + E L+ M +
Sbjct: 288 ITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEAAGF 347
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ N + +G +++ + + + G++P ++ +++ +G+A ++E+ +
Sbjct: 348 APNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANH 407
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK-PSCVTLCSLVRAY 248
+ +++ Y +I+ + GD M S + PS + + +++AY
Sbjct: 408 YYQELKRCGYKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSILGI--ILQAY 465
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
GK + + +L+ ++ I L+ F+ LV AY
Sbjct: 466 EKVGKIDVVPYLLKGSFHNHIRLNQTSFSILVMAY 500
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 100/238 (42%), Gaps = 11/238 (4%)
Query: 24 DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
+ N +++ +L GR +++A L+E + Q ++ +I +C K
Sbjct: 173 EGNFGAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIYACTKKGNVKLAS 232
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM-----LSEDCEPDVWTMNC 138
M G+RPN T L+ Y + E E M + E + T+
Sbjct: 233 KWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVCESAYSSMITIYT 292
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
LR + + ++ + K ++ + + ++L++Y + G E+ +V+ M+
Sbjct: 293 RLRLYEKAEEVINLMK------QDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEAAG 346
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
++ I+ YN +I +G+ ++ + LF + ++P + S++ +G A E+
Sbjct: 347 FAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEE 404
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK---NTPDC- 59
K K+ A+ELF+ M+ +GC N ++TAL+ Y +SG +KA + M+ + PD
Sbjct: 571 KAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630
Query: 60 -----------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+P+V TY L+ KA + LL M G PNT+ Y+ LID +
Sbjct: 631 MYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGF 690
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+A E + KM+ P+V+T + + ++D + K K P+I
Sbjct: 691 CKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNI 750
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++D K ++ +M M++ +VTY +ID FG+AG + + LFR
Sbjct: 751 VIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M S+ P+ VT L+ G ++ ++L + + + +++ Y R
Sbjct: 811 MGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE-- 868
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE +++ G P + Y+ ++ + G A E
Sbjct: 869 FILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELH 911
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 15/323 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
K E + E NT + ++S + F++A L M++T C P+V TY IL
Sbjct: 291 KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRST-SCIPNVQTYRIL 349
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ CL + + +LS M +G P+ +N+L+ AY ++ F+ L KM +C
Sbjct: 350 LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409
Query: 130 EPDVWTMNCTLRAFGNSGQI------DTMEKCYEKFQSAGIQPSINTFNILLDSYGKA-- 181
+P N + + + G++ + EK Y + SAG +N N++ S+ +
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGT--VLNKVNVV--SFARCLC 465
Query: 182 --GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G FEK V+ M + TY+ VI A ++ +LF+ M+ + P
Sbjct: 466 GFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVY 525
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + AG ++ + L + V + L+ AY + K + + E+M
Sbjct: 526 TYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM 585
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+GC P+ +TY ++ Y +G
Sbjct: 586 IAKGCFPNVITYTALIDGYCKSG 608
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 30/312 (9%)
Query: 9 EKAHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
E A + + M+ G N SF L +G+ F+KA+ ++ M PD +T
Sbjct: 436 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGN-GFVPDTST 491
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS +I A + L +M G+ P+ TY LID + +A + + L +M+
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ CEP V T + A+ + ++ + +E + G P++ T+ L+D Y K+G+ E
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + M+ G A D+ ++ F++ + KP+ VT +LV
Sbjct: 612 KACQIYARMR------------------GDA-DIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 246 RAYGHAGKPEKLGSVLR--FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
A K + +L F+D + +T+ ++ L+D + + E + V M +RG
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEP--NTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710
Query: 304 CKPDKVTYRTMV 315
P+ TY +++
Sbjct: 711 YNPNVYTYSSLI 722
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A +L + M +GC+ NT + AL+ + ++ D+A + M P
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER-GYNP 713
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS LI K D V +LS M PN V Y +ID + E +
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ M + C+P+V T + FG +G++D + + + S G P+ T+ +L++
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK-----P 236
GH ++ A++E M++ ++ + +Y VI+ + R E++ L E ++ P
Sbjct: 834 GHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR-------EFILSLGLLEEVEKNGSAP 886
Query: 237 SCVTLCSLVRAYGHAGKPE 255
+ + L+ + AG+ E
Sbjct: 887 TILLYKVLIDNFVKAGRLE 905
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 131/353 (37%), Gaps = 74/353 (20%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--- 95
R+GL++ A L +K+ +P TY+ L++ L+A D Q + +MS G+
Sbjct: 218 RNGLWNVALEELGRLKDF-GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 96 -----------------------------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
PNT+ YN +I A F E L +M S
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+V T L N Q+ ++ + G PS FN L+ +Y K+ F
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL------KQMEYLFRLMRSERIKPSCVT 240
+++ M+K V YNI+I + G+L + E + M S + V
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456
Query: 241 LCSLVRAYGHAGKPEKLGSVLR------FIDNSDIMLDTVFFNC---------------- 278
+ S R GK EK V+ F+ ++ + + F C
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516
Query: 279 -------------LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
L+D + + + L+ M + GC+P VTY T++ AY
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 52/252 (20%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A++L M ++GC N ++TA++ +G++G DK L M + C P
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM-GSKGCAP 818
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY++LI C D+ ALL +M + +Y +I+ Y R E L+L
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR-----EFILSL 873
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
G ++ +EK G P+I + +L+D++ KA
Sbjct: 874 -------------------------GLLEEVEK-------NGSAPTILLYKVLIDNFVKA 901
Query: 182 G--------HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
G H E +SA M K + Y +I +F A + LF M +
Sbjct: 902 GRLEVALELHKEVISASMSMTAKKN------LYTSLIYSFSYASKIDHAFELFYDMIRDG 955
Query: 234 IKPSCVTLCSLV 245
+ P T L+
Sbjct: 956 VIPDLGTFVHLL 967
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + +K ELF+ M +GC N ++T L++ +G D+A++LLE MK T
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY-WPK 853
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
V++Y +I+ + F LL ++ G P + Y LID + GR ++ E+
Sbjct: 854 HVSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELH 911
Query: 119 LTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++ +S + +++T + +F + +ID + + G+ P + TF LL
Sbjct: 912 KEVISASMSMTAKKNLYT--SLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMG 969
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSW 201
+ +E+ + + + + +W
Sbjct: 970 LIRVRRWEEALQLSDSLCQMDINW 993
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 5/249 (2%)
Query: 1 MLGKCKQPEKAHELF-QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L K PE + F A G D + ALL + R G +D+ D
Sbjct: 144 ILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFER-GSYDRVPEEFLREIRGDDK 202
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+ ++LI+ C + ++ L + G +P +TYN L+ + RA +L
Sbjct: 203 EVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL 262
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M D +T+ +A G+ EK P+ +N ++
Sbjct: 263 VHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLC 319
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A FE+ + M+ + TY I++ L + + + +M +E PS
Sbjct: 320 EASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379
Query: 240 TLCSLVRAY 248
SLV AY
Sbjct: 380 IFNSLVHAY 388
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 4/327 (1%)
Query: 3 GKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
KC P++A LFQ MVD GC+ +SF ++L+A+ S + +A + + T P
Sbjct: 89 AKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQ-TAGMSP 147
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ILIK K F+K + LL+ M G+ P+ ++Y TLI+A ++ +
Sbjct: 148 NLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELF 207
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGK 180
+M PDV N + F G + +++ + + + PS+ T+NI+++ K
Sbjct: 208 DEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + M+K S + T++ +I +AG+ E +F+ M + P T
Sbjct: 268 LGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRT 327
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ GK K + + ++ + V +N L+ K + +++
Sbjct: 328 YNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLH 386
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+RG K D TY ++ NG N A
Sbjct: 387 ERGLKADSTTYGLLINGLCKNGYLNKA 413
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 40/351 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A ELF M G + + + L+ + R G F KA + + + P
Sbjct: 194 LAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYP 253
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+I+I K D+ + + M P+ T++++I +A F E
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE------------------------ 157
+M+ PDV T N L +G+++ KC+E
Sbjct: 314 QEMIESGLSPDVRTYNAMLSGLFRTGKLN---KCFELWNVMSKNNCCNIVSYNMLIQGLL 370
Query: 158 ---KFQSA----------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
K + A G++ T+ +L++ K G+ K ++E +
Sbjct: 371 DNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTF 430
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+ ++ + G L+Q L M+ R K + SL+ Y A K E+ SVLR +
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM 490
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ D V +N +++ + + F++ L+ M + G KPD +TY ++
Sbjct: 491 KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLI 541
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 124/254 (48%), Gaps = 10/254 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK KA + + +EG D +T ++++++ + G+ ++A L+ MK +
Sbjct: 403 GLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRR-K 461
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ + ++ LI ++AF ++ ++L +M ++ P V+YNT+I+ +A+ F++ L+
Sbjct: 462 LNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLS 521
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML E +PD+ T + + ++D + + + ++P + NI++
Sbjct: 522 LKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCT 581
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + M++ + +VT+N +++ +AGD + ++ + ++P ++
Sbjct: 582 AQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIIS 641
Query: 241 -------LCSLVRA 247
LCS R
Sbjct: 642 YNITFKGLCSCARV 655
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 10/325 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A ++FQ M++ G + +++ A+LS R+G +K F L M C
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-- 357
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ +Y++LI+ L ++ + +G++ ++ TY LI+ + + L
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRIL 417
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ +E + D + + + G ++ + + + + + + FN L++ Y +A
Sbjct: 418 EEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA 477
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E+ +V+ M+ + T+V+YN +I+ +A + M E +KP +T
Sbjct: 478 FKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITY 537
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV-LEV-- 298
L+ K + ++ N + D N ++ C A+ V LE+
Sbjct: 538 SLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGL----CTAQKVDVALEIFT 593
Query: 299 -MQQRGCKPDKVTYRTMVRAYSTNG 322
M+Q C PD VT+ T++ G
Sbjct: 594 QMRQVNCVPDLVTHNTIMEGLYKAG 618
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ A+ + M++EG + +++ L+ R D A +L N +P
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK-RLKP 567
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ ++I+I A D + + M P+ VT+NT+++ +A E
Sbjct: 568 DLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILL 175
++L +PD+ + N T + + ++ D +E Y+ GI P+ T+N+L+
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR-GILPNAPTWNVLV 681
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 2/274 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F +L Y + GL +K ++ + + D Y+ +I C +A D++ + +M
Sbjct: 163 FLDMLRTYQKCGLLEKLADTYYWIRKS-QVKCDEAMYNCIINCCGRAIPVDELSRIFDEM 221
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
QG NTVT+N L+D YG+A +F E + M + D+ + N + A+ G
Sbjct: 222 LQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFI-MARKQGLADIISYNTIIAAYAKGGNF 280
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+M + Q AG S+ +N +LD+YGKAG E+ ++V++ M++ + TYNI+
Sbjct: 281 LSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIM 340
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I+ +GR G ++ + + ++ ++P + +L++AYG A PE +++ + I
Sbjct: 341 INIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGI 400
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
D V + L+ A R + F E M+Q G
Sbjct: 401 SPDRVTYANLIAALQRNENFLEAVKWSLWMKQTG 434
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 155/339 (45%), Gaps = 9/339 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M N + ++ + F A ++L +K + D+ YS+++
Sbjct: 73 AVRIYNQMPKSETHPNPRISCTMIDVFSTMERFADAETILLELKASASVL-DMIAYSVIV 131
Query: 71 KSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ +KA ++L++M Q I P+ + ++ Y + + ++ T +
Sbjct: 132 RMYIKARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQV 191
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ D NC + G + +D + + +++ G + TFN+LLD YGKAG F +
Sbjct: 192 KCDEAMYNCIINCCGRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEK 251
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V +K + I++YN +I A+ + G+ M Y ++M+ S ++ AYG
Sbjct: 252 VFIMARKQGLA-DIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYG 310
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AG+ E+ SVL+ + + D +N +++ YGR ++ VL ++ RG +PD
Sbjct: 311 KAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLY 370
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+Y T+++AY M +D V+ M E + PD
Sbjct: 371 SYNTLIKAYGIARMP------EDAVKLMQEMRVKGISPD 403
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 141/293 (48%), Gaps = 1/293 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+++ ++ Y ++ A S+L M+ + PD + ++++ K +K+
Sbjct: 126 AYSVIVRMYIKARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYW 185
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ ++ + YN +I+ GRA E+ +ML + + T N L +G +G
Sbjct: 186 IRKSQVKCDEAMYNCIINCCGRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGL 245
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ EK + + G+ I ++N ++ +Y K G+F M+ ++ MQ + ++ YN
Sbjct: 246 FNRAEKVFIMARKQGL-ADIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNC 304
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++DA+G+AG L++ + + M+ + K T ++ YG G + + +VL + +
Sbjct: 305 MLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRG 364
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ D +N L+ AYG + + +++ M+ +G PD+VTY ++ A N
Sbjct: 365 VEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQRN 417
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 144/333 (43%), Gaps = 38/333 (11%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ S + L+++ ++ L ++A +L K D + N Y ILI SC + ++ +
Sbjct: 18 DATSCSILVTSLVQNSLLEEALYILRE-KKWKDSAFEDNLYHILICSCKEGGNYNDAVRI 76
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM--------------------- 124
+ M PN T+ID + + FA+ E L+++
Sbjct: 77 YNQMPKSETHPNPRISCTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIK 136
Query: 125 ---LSEDCE------------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
L + C PD + LR + G ++ + Y + + ++
Sbjct: 137 ARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEA 196
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+N +++ G+A +++S + + M + + VT+N+++D +G+AG + E +F +
Sbjct: 197 MYNCIINCCGRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMA 256
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
R + + ++ +++ AY G + ++ + ++ + +NC++DAYG+
Sbjct: 257 RKQGL-ADIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRL 315
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
E VL+ M++ CK D TY M+ Y G
Sbjct: 316 EEFASVLQKMKRAKCKFDHYTYNIMINIYGRRG 348
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++ +F M+ +G ANT +F LL YG++GLF++A + + D
Sbjct: 206 GRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQG--LAD 263
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I + K F + + M G + YN ++DAYG+A E L
Sbjct: 264 IISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQ 323
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM C+ D +T N + +G G I + + + G++P + ++N L+ +YG A
Sbjct: 324 KMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIAR 383
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
E +M+ M+ S VTY +I A R
Sbjct: 384 MPEDAVKLMQEMRVKGISPDRVTYANLIAALQR 416
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 3/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LFQ M+D + SF L++ R+G + A M + C P+V TYS+
Sbjct: 62 ERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR--CSPNVITYSV 118
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + LL M +G P+ +TY L+D + A L +ML
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P++ T N L + ++ G P++ T+ L+D K G +
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A++ M + ++ YN++I+ +A + + L R S IKP VT S++
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + ++ +L ++ + D + ++ L+D + E + EVM GC D
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358
Query: 309 VTYRTMVRAYSTNGMKNHA 327
VTY T++ G + A
Sbjct: 359 VTYSTLIDGLCKAGRVDEA 377
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 1/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A EL ++M GC + ++T L+ + A+ +L M + C P
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA-GCVP 181
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+ +A AL+ DM+ +G PN VTY TLID + + L
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + PD+ N + + Q+D + S GI+P + T++ ++ ++
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ Y++ ++ Y+ +ID +AG + + L+ +M + VT
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ AG+ ++ +L + T+ +N L+ L E ++E M++
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421
Query: 302 RGCKPDKVTYRTMVRA 317
C P VTY ++
Sbjct: 422 SNCAPSAVTYNILIHG 437
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 7/340 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E A E F+ M D+ C N +++ L+ ++ +A LLE MK C
Sbjct: 88 GLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK-ARGCS 145
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+IL+ K +L +M G PN VTYN+L+ RA+ ++
Sbjct: 146 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 205
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M C P+V T + G++ G P + +N+L++ K
Sbjct: 206 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 265
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A ++ A++ +VTY+ VI R+ L + L ++S P +
Sbjct: 266 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 325
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AGK ++ + + D V ++ L+D + E +L M
Sbjct: 326 YSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 385
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ G P +TY ++++ NH E +LVE+M+ +
Sbjct: 386 RMGTPPSTMTYNSLIKGLCD---LNHLDEAIELVEEMERS 422
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A E+ + M+D GC N ++ +LL R+ A +L+ M C
Sbjct: 157 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCT 215
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY LI K A+L+DM +G P+ + YN LI+ +A E
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + +S +PDV T + + S ++D + +S G P + ++ L+D K
Sbjct: 276 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 335
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ + E M +VTY+ +ID +AG + + L M PS +T
Sbjct: 336 AGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMT 395
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL-KCFAEMKGVLEVM 299
SL++ ++ ++ ++ S+ V +N L+ R+ + + + M
Sbjct: 396 YNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEM 455
Query: 300 QQRGCKPDKVTYRTMVRA 317
G PD +TY ++
Sbjct: 456 IDNGVIPDHITYSILLEG 473
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +P++A ELF+ M C + ++ LL R+G ++A +L + M +
Sbjct: 19 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR--S 76
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV +++IL+ +A + M + PN +TY+ LID +A ++
Sbjct: 77 HDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVEL 135
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + C PDV T + ++ + + AG P++ T+N LL +
Sbjct: 136 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 195
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A A+M M + +VTY +ID + G +K + M + P +
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ A + ++ ++LR + I D V ++ ++ R E +L ++
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
RGC PD + Y T++ G + A + +++
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 3/298 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M D GC+ N ++ +L+ ++ D+A L EHMK+ +C P + TY+ L+ +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV-ECSPSMVTYNTLLDGLFRTG 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
++ AL +M + + +++N L+ RA E L + + + C P+V T +
Sbjct: 60 KLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKI-ETALEFFRKMDDRCSPNVITYS 117
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ + ++ + E ++ G P + T+ IL+D K V+ M
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+VTYN ++ RA + L R M P+ VT +L+ G+ +
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++L + + D + +N L++ + E +L G KPD VTY +++
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ G +P++ T+N L+D K ++ + E+M+ S ++VTYN ++D R G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L++ LF+ M R ++ LV AGK E R +D+ + + ++
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
L+D + ++ +LE M+ RGC PD +TY +V A ++ L E +D
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE--SKVAAAWEVLREMLD 176
Query: 339 ETCL 342
C+
Sbjct: 177 AGCV 180
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 164/384 (42%), Gaps = 42/384 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML Q K HEL+ M EG C +T +++AL+SA+ + G D A LL MK
Sbjct: 203 MLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQ 262
Query: 57 PD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
P C+PDV TY+ LI+ KA D+
Sbjct: 263 PTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHF 322
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA-FG 144
+M +G RP+TV N +I+ G+A + +M + C P V T N ++A F
Sbjct: 323 FYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFE 382
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + + +E+ + +GI PS T++IL+D + K EK ++E M + +
Sbjct: 383 SKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPA 442
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y +IDA G+A LF+ ++ S +++ G AG+ + ++ +
Sbjct: 443 AYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM 502
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ D +N L+ R E + MQ+ GC PD +Y ++ + G
Sbjct: 503 NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGP 562
Query: 325 NHAKEFQDLVEKMDETCLAMKRPD 348
+ A E ++ M ++ + RPD
Sbjct: 563 HRAME---MLSNMKQSTV---RPD 580
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 142/370 (38%), Gaps = 50/370 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K KA +F + C Q++ +++ G + K L M C
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCF 227
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P T Y LI D +G +
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM + C PDV+T +R G +G+ID + + Q G +P N
Sbjct: 288 FEEMR-------HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNN 340
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + + M ++VTYN +I A F ++ F M+
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK----- 287
I PS T L+ + + EK +L +D + L+DA G+ K
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460
Query: 288 --CFAEMK----------------------------GVLEVMQQRGCKPDKVTYRTMVRA 317
F E+K + + M + GC PD Y ++
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520
Query: 318 YSTNGMKNHA 327
+ GM + A
Sbjct: 521 LARTGMLDEA 530
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L + M T C P
Sbjct: 310 LGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEM-GTLRCIP 368
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY+ +IK+ ++ + +V + M GI P++ TY+ LID + + E +
Sbjct: 369 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRM-EKAMM 427
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + D + +++ + S + +++ G
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + + M K + + YN ++ R G L + R M+ P
Sbjct: 488 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P + +L + S + D V +N ++ A F E ++E M
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
G + D +TY +++ A
Sbjct: 608 NTLGFEYDLITYSSILEA 625
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ A G++ +D A L + +K +C
Sbjct: 418 KTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--NCGSSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK KA D + +M+ G P+ YN L+ R M E T+
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PD+ + N L +G + + + ++P + ++N +L + AG
Sbjct: 536 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 595
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
FE+ + +ME M + + ++TY+ +++A G+
Sbjct: 596 MFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKV 629
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A +F M GC + ++ AL+S R+G+ D+A S + M+ C P
Sbjct: 486 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH-GCIP 544
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+N+Y+I++ K + +LS+M +RP+ V+YNT++ A A MF E +
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLM 604
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+M + E D+ T + L A G T + C
Sbjct: 605 EEMNTLGFEYDLITYSSILEAIGKVDHEYTGQGC 638
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 152/319 (47%), Gaps = 1/319 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ L M ++GC + ++ ++ R+G D+AF L + M + DV
Sbjct: 248 RAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM-DKKGLVADV 306
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYSILI K + + +L +M ++G++P V Y LID + R E +
Sbjct: 307 FTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEE 366
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML+ + +++T N ++ G ++ + + GI+P T+N +++ Y K +
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQN 426
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M+K + T T ++I+ R G ++ +F +M S +KP+ V +
Sbjct: 427 TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTT 486
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L++ + G+ ++ +L+ +D + D + +N ++ + + E K L M +RG
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 304 CKPDKVTYRTMVRAYSTNG 322
KP+ TY ++ Y +G
Sbjct: 547 LKPNVYTYGALIHGYCKSG 565
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 150/336 (44%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK K+ +A + + M +G ++TAL+ + R G +AF + E M +
Sbjct: 316 FGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML-ARGVKL 374
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ L+K K +K ALL++M GI+P+T TYN +I+ Y + + + ++ L
Sbjct: 375 NLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P +T + G I+ + +E S G++P+ + L+ + +
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQE 494
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F++ +++ M K ++ YN VI ++ +++ + M +KP+ T
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y +G+ + + + I + V L+D Y + E + M
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
R PD TY ++ NG A E + +EK
Sbjct: 615 RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 8/334 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
++G CK + E+A + M++ G N ++ AL+ Y +SG A + M
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEM 117
DV +++ C K + + ++ M + + P+ TY+ LI R K+ M
Sbjct: 583 APNDVVCTALIDGYC-KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
EL L + L + PDV+T N + F G I + +E GI P+I T+N L++
Sbjct: 642 EL-LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
KAG E+ + + + + VTY +ID + ++G+L + LF M + + P
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDN-SDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+L+ G EK S+ F+++ T N L+D + + E +L
Sbjct: 761 SFVYSALIDGCRKEGNTEKALSL--FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLL 818
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
E M + KPD VTY ++ + G A++F
Sbjct: 819 EDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 157/340 (46%), Gaps = 13/340 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ----PDVN 64
+ A EL +++G + ++ +++S + + G KAF L E+M CQ P++
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM-----CQKGISPNII 692
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ LI KA ++ + L + +G+ N VTY T+ID Y ++ ++ +M
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PD + + + G + + + G S ++ N L+D + K+G
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKV 811
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + ++E M H VTY I+ID + G LK+ E F M+ + P+ +T +L
Sbjct: 812 IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTAL 871
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y AG+ ++ ++ + DI D V ++ ++DA+ + + +++ M ++G
Sbjct: 872 LSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGG 931
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
K ++ K H E ++EK++E L +
Sbjct: 932 NVSKNVCHVLIDPLCR---KEHVSEVLKVLEKIEEQGLNL 968
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 153/382 (40%), Gaps = 42/382 (10%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--- 57
G CK EKA L M+ G +TQ++ ++ Y + + LL MK +
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444
Query: 58 -------------------------------DCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+P+ Y+ LIK ++ F + +L
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRIL 504
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +G++P+ + YN++I +++ E + LV+M+ +P+V+T + + S
Sbjct: 505 KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKS 564
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ ++ +++ GI P+ L+D Y K G + +++ M + TY
Sbjct: 565 GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTY 624
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I R G L+ L + + P T S++ + G K + ++
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ 684
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
I + + +N L++ + + + + + +G + VTY T++ Y +G N
Sbjct: 685 KGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG--NL 742
Query: 327 AKEFQDLVEKMDETCLAMKRPD 348
+K F+ DE L PD
Sbjct: 743 SKAFR----LFDEMTLKGVPPD 760
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 41/318 (12%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK + E+A ELF + +G N ++ ++ Y +SG KAF L + M K P
Sbjct: 700 GLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVP- 758
Query: 59 CQPDVNTYSILIKSCLK--------AFAFDKVQA-------------------------- 84
PD YS LI C K + + VQ
Sbjct: 759 --PDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQ 816
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LL DM + ++P+ VTY LID + + E E V M + P+ T L +
Sbjct: 817 LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYN 876
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G+ M +++ + I+P T+++++D++ K G K +++ M K + +
Sbjct: 877 MAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+++ID R + ++ + + + + S T +LVR + AGK + VL+ +
Sbjct: 937 VCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Query: 265 DNSDIMLDTVFFNCLVDA 282
+ D+ N L++
Sbjct: 997 VRFKWVPDSTELNDLINV 1014
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 2/254 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA LF V +G A+T S AL+ + +SG +A LLE M + +PD TY+I
Sbjct: 778 EKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVD-KHVKPDHVTYTI 835
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + + DM + + PN +TY L+ Y A +EM +M+++D
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPD T + + A G K + G S N ++L+D + H ++
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+E +++ + ++ T + ++ F +AG + + + M + P L L+
Sbjct: 956 KVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVE 1015
Query: 249 GHAGKPEKLGSVLR 262
+ E G L+
Sbjct: 1016 QDSTDSENAGDFLK 1029
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ LI + +A + + LL +M +G P+ VTYN +I RA E L
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDE-AFEL 293
Query: 122 VKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K++ + DV+T + + FG + + E+ S G++P + L+D + +
Sbjct: 294 KKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMR 353
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + V E M + TYN ++ + GD+++ + L M IKP T
Sbjct: 354 QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQT 413
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ Y ++ +L + S+++ +++ R + V E+M
Sbjct: 414 YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV 473
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G KP+ V Y T+++ + G A +++K
Sbjct: 474 SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 8/297 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFA-FD 80
G QSF+ L S LF +A S++ M YS ++ S +K+ FD
Sbjct: 96 GFSQKLQSFSILALILCNSRLFSRADSVVNQM-----IMMSSGGYSEILDSLIKSCKEFD 150
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
++ S R V + LID Y + +F E + + N L
Sbjct: 151 LNNVNGNENSNNNDRG--VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLL 208
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +++ + Y A + + T+ L++++ +AG+ ++ ++ M++ S
Sbjct: 209 SDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCS 268
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
++VTYN+VI RAG++ + L +LM + + T L+ +G + + +
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
L + + + V + L+D + R E V E M RG K + TY +V+
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKG 385
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N LL KA E M + + + TY +I+A RAG+ K+ + L M
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ PS VT ++ AG+ ++ + + +D ++ D ++ L+D +G+ K E
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
K +LE M +G KP V Y ++ + G
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 253 KPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
K KL RF + ++++ D + L++A+ R E K +L M+++GC P V
Sbjct: 213 KANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLV 272
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEK 336
TY ++ G + A E + L++K
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDK 299
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 152/330 (46%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A E F M + G T ++ L+ YG +G +++ LLE M + +P++ TY++
Sbjct: 100 ESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNV 159
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ + ++ M GI+P+ VTYNT+ AY + + E +++M +
Sbjct: 160 LVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNG 219
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G+I + + + GI P++ FN L+ + + +
Sbjct: 220 VQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVD 279
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M+++ ++T++ +++A+ AG +++ +F M I+P L + Y
Sbjct: 280 EVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGY 339
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
A +PEK +L + S + V F ++ + V + M QRG P+
Sbjct: 340 VRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNL 399
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
T+ T++ ++ A+E ++ + +
Sbjct: 400 KTFETLIWGFAEARQPWKAEEILQIMTEFE 429
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++A +F ++++ G + S+T LL+A FD +S++ ++ PD +
Sbjct: 28 KPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEEN-GMNPDSIFF 86
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I + ++ + M G++P T TYNTLI YG A E + L++++S
Sbjct: 87 NAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGK-PEESVKLLELMS 145
Query: 127 ED--CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ +P++ T N +RA+ N +I K ++GIQP + T+N + +Y + G
Sbjct: 146 QEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGAL 205
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCS 243
++ V+ MQ T I++ + + G +++ + + +R M+ I P+ V S
Sbjct: 206 DQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYR-MKELGIHPNLVIFNS 264
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L++ + + + VL ++ + D + F+ +++A+ + + + + M + G
Sbjct: 265 LIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAG 324
Query: 304 CKPDKVTYRTMVRAY 318
+PD Y + + Y
Sbjct: 325 IEPDAHAYSILAKGY 339
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ +++ + G +P+ ++Y TL+ A K F + + ++ PD N
Sbjct: 30 QEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAV 89
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM----- 194
+ AF SG +++ + + K Q G++P+ +T+N L+ YG AG E+ ++E M
Sbjct: 90 INAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGN 149
Query: 195 ------------------QKYHYSWT-------------IVTYNIVIDAFGRAGDLKQME 223
++ +W +VTYN + A+ + G L Q E
Sbjct: 150 VKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAE 209
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF---IDNSDIMLDTVFFNCLV 280
+ M++ ++P+ T ++ Y G ++ LRF + I + V FN L+
Sbjct: 210 GVILEMQNNGVQPNERTCGIIMSGYCKEG---RIREALRFAYRMKELGIHPNLVIFNSLI 266
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+ + + VL +M++ G KPD +T+ T++ A+ST G +E F D+V+
Sbjct: 267 KGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVK 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 7/281 (2%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ +A + M+ G + ++ + +AY + G D+A ++ M+N QP+ T
Sbjct: 168 KRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN-GVQPNERT 226
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
I++ K + M GI PN V +N+LI + ++ L M
Sbjct: 227 CGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLME 286
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---SAGIQPSINTFNILLDSYGKAG 182
+PDV T + + A+ +G MEKC E F AGI+P + ++IL Y +A
Sbjct: 287 EFGVKPDVITFSTIMNAWSTAG---FMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQ 343
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK ++ M K + +V + VI + AG + +F M I P+ T
Sbjct: 344 EPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFE 403
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+L+ + A +P K +L+ + ++ + + +A+
Sbjct: 404 TLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAW 444
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ E + G +PS+ ++ LL + F+ + +++ +++ + + +
Sbjct: 27 GKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFF 86
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N VI+AF +G+++ F M+ +KP+ T +L++ YG AGKPE+ +L +
Sbjct: 87 NAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQ 146
Query: 267 -SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ + +N LV A+ K E V+ M G +PD VTY T+ AY+ G +
Sbjct: 147 EGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALD 206
Query: 326 HAK 328
A+
Sbjct: 207 QAE 209
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 11/232 (4%)
Query: 1 MLGKCKQPEKAHELFQA--MVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMK 54
M G CK+ L A M + G N F +L+ + R G+ D+ +L+E
Sbjct: 231 MSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGV-DEVLNLMEEF- 288
Query: 55 NTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
+PDV T+S ++ + A +K + + DM GI P+ Y+ L Y RA+
Sbjct: 289 ---GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEP 345
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ E L M+ +P+V + + ++G++D + ++K GI P++ TF L
Sbjct: 346 EKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETL 405
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+ + +A K +++ M ++ T +V +A+ G K+ L
Sbjct: 406 IWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLL 457
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 171/396 (43%), Gaps = 66/396 (16%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML Q EK H+L+ M EG C +T +++AL+SA+ + G D A LL MK
Sbjct: 1193 MLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQ 1252
Query: 57 PD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
P C+PDV TY+ LI+ KA D+
Sbjct: 1253 PTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHF 1312
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLSEDCEPDVWTMNC 138
+M +G RP+TV N +I+ G+A K+F EME TL C P V T N
Sbjct: 1313 FCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME-TL------RCIPSVVTYNT 1365
Query: 139 TLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++A F + + + +E+ + +GI PS T++IL+D + K EK ++E M +
Sbjct: 1366 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 1425
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--GHAGKPE 255
+ Y +IDA G+A LF + +K +C + + V A H GK
Sbjct: 1426 GFPPCPAAYCSLIDALGKAKRYDLACELF-----QELKENCGSSSARVYAVMIKHLGKAG 1480
Query: 256 KLGSVLRFIDNSDIM---LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+L + D + + D +N L+ R E + MQ+ GC PD +Y
Sbjct: 1481 RLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYN 1540
Query: 313 TMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
++ + G + A E ++ M ++ + RPD
Sbjct: 1541 IILNGLAKTGGPHRAME---MLSNMKQSTV---RPD 1570
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 145/370 (39%), Gaps = 50/370 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K +A +F + C Q++ +++ G ++K L M C
Sbjct: 1158 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCF 1217
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P T Y LI DA+G +
Sbjct: 1218 PDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 1277
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM + C PDV+T +R G +G+ID + + Q G +P N
Sbjct: 1278 FEEMR-------HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 1330
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + + M+ ++VTYN +I A F ++ F M+
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK----- 287
I PS T L+ + + EK +L +D + L+DA G+ K
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 1450
Query: 288 --CFAEMK----------------------------GVLEVMQQRGCKPDKVTYRTMVRA 317
F E+K + + M + GC PD Y ++
Sbjct: 1451 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510
Query: 318 YSTNGMKNHA 327
+ GM + A
Sbjct: 1511 LARTGMLDEA 1520
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L + M+ T C P
Sbjct: 1300 LGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME-TLRCIP 1358
Query: 62 DVNTY------------------------------------SILIKSCLKAFAFDKVQAL 85
V TY SILI K +K L
Sbjct: 1359 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 1418
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFG 144
L +M +G P Y +LIDA G+AK + ++ L + L E+C ++ G
Sbjct: 1419 LEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLACELFQELKENCGSSSARVYAVMIKHLG 1477
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+G++D +++ G P + +N L+ + G ++ + M MQ++ I
Sbjct: 1478 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 1537
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+YNI+++ + G + + M+ ++P V+ +++ A HAG E+ +++ +
Sbjct: 1538 SYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597
Query: 265 DNSDIMLDTVFFNCLVDAYGRL 286
+ D + ++ +++A G++
Sbjct: 1598 NTLGFEYDLITYSSILEAIGKV 1619
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 111/284 (39%), Gaps = 39/284 (13%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+T TY LI + + EM + +M+ C ++ +R GN+ +
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITI 1171
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFG 214
+ + ++ QP +N ++ G +EK+ + M + + VTY+ +I AF
Sbjct: 1172 FYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFC 1231
Query: 215 RAGD-------LKQME----------------------------YLFRLMRSERIKPSCV 239
+ G L +M+ LF MR + +P
Sbjct: 1232 KLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVF 1291
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+R G AG+ ++ + DTVF N +++ G+ + + + M
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 1351
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ C P VTY T+++A + K+ A E E+M E+ ++
Sbjct: 1352 ETLRCIPSVVTYNTIIKALFES--KSRASEVPSWFERMKESGIS 1393
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 10/337 (2%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK A +L + M ++GC N ++ ++ + + L +A L M N
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR-GIS 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TYS ++ ++ +L M + + P+TVT+N L+D + M E +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCV 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ + EP+V T N + + + Q+D +K + G PS+ ++NIL+ + K
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK 269
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G ++ ++ M + VTY+ ++ F + G + + L MRS + P +T
Sbjct: 270 SGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMT 329
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLE 297
++ G ++ +L+ + S I + + L+ +G+L+ E+ L
Sbjct: 330 YSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLF 389
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
V +G +PD VTY M+ G+ N A E F+D+
Sbjct: 390 V---KGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 153/327 (46%), Gaps = 2/327 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +LF MV G + + +++ +++ + G A LL+ M+ C+P+V YS +I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEE-KGCKPNVVVYSTII 124
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + LS+M +GI PN VTY++++ + E +M+ +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + G I + +E G++P++NT+N L+D Y ++ +
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + ++ +YNI+I ++G + + + L M + + P VT +L++ +
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+P+ +L + + ++ D + ++ ++D + E +L+ MQ+ +P+
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364
Query: 311 YRTMVRAYSTNGMKNHAKE-FQDLVEK 336
Y +++ G A+E F +L K
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVK 391
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 4/336 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K +A E MV+ G N +++++L + G ++A SL + M + P
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER-NVMP 185
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++IL+ K + Q + M +G+ PN TYN L+D Y E +
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + C P V + N ++ SG+ID + + + P T++ L+ + +
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + ++E M+ Y ++TY+IV+D + G L + L + M+ +I+P+
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L++ + GK E + + I D V + ++ + E + M
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAV 425
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P+ TY +++ + NG ++A L+E+M
Sbjct: 426 HGCLPNSCTYNVIIQGFLRNGDTSNAGR---LIEEM 458
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 139/308 (45%), Gaps = 1/308 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +A LF+ MV+ +T +F L+ + G+ +A + E M +P+VNTY
Sbjct: 167 RSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE-KGVEPNVNTY 225
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ D+ Q L + M +G P+ +YN LI + ++ E + L +M
Sbjct: 226 NALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH 285
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ PD T + ++ F G+ +K E+ +S G+ P + T++I+LD K GH ++
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDE 345
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ MQ+ I Y I+I G L+ LF + + I+P VT ++
Sbjct: 346 AFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMIS 405
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G + + R + + ++ +N ++ + R + ++E M RG
Sbjct: 406 GLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSA 465
Query: 307 DKVTYRTM 314
D T++ +
Sbjct: 466 DSSTFQML 473
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +F+ M+++G + N ++ AL+ Y D+A L M C P V +Y+IL
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR-KGCAPSVRSYNIL 263
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K+ D+ + LL++MS + + P+TVTY+TL+ + + + + L +M S
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD+ T + L G +D + + Q + I+P+I + IL+ G E
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +VTY ++I + G + LFR M P+ T +++ +
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL 443
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
G G ++ + D+ F L D R
Sbjct: 444 RNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 3/220 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C Q + +A +LF MV +GC + +S+ L+ + +SG D+A LL M +
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA- 287
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD TYS L+K + Q LL +M + G+ P+ +TY+ ++D + E
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M EP+++ ++ N G+++ + + GIQP + T+ +++
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
K G + + M + TYN++I F R GD
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 12/278 (4%)
Query: 58 DCQPDVNTYSILIKSCLKA------FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GR 110
+ +PDV T +ILI + FAF ++L +M G++PN VT++TL++ +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAF----SVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 111 AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT 170
AK+ ++L +M+ EPDV T + + G + +K + G +P++
Sbjct: 61 AKIIDAVKL-FDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
++ ++DS K + + M S +VTY+ ++ F G + LF+ M
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+ P VT LV G + V + + + +N L+D Y
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
E + + +M ++GC P +Y +++ + +G + AK
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ +P+ A +L + M G + +++ +L + G D+AF LL+ M+ +
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQES-K 357
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P++ Y+ILI+ + + L S++ +GI+P+ VTY +I + + E
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
M C P+ T N ++ F +G + E+ G +TF +L D
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ELF + +G + ++T ++S + GL ++A L M C P+ TY++
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA-VHGCLPNSCTYNV 437
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
+I+ L+ L+ +M +G ++ T+ L D R ++ +
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDEIIS 484
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 9 EKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++A L +AM E C N S+T L+ A L D+A LL M+ + + DV T
Sbjct: 94 DRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR-SAGVRADVVT 152
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y LI+ A DK L+ +M GI PN V Y++L+ Y ++ + ++ V+M
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ EPDV + + G+ + G++P++ T+N+L++ K G +
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERI-KPSCVTLCS 243
+ V++ M + + +VTYN +I ++ + +L ++R + I KP+ VT S
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ G+ + V ++ + M++ V +N L+ R+ + +++ M G
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 304 CKPDKVTYRTMVRAY 318
+PD TY +++ +
Sbjct: 393 LEPDSFTYSILIKGF 407
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 42/337 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KAH + MV G + N ++ L++ + G +A +L+ M P
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAP 288
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAY---GRAK---- 112
DV TY+ LIK D+ LL +M ++PN VT+N++I GR +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 113 MFAEMELT----------------------------LVKMLSEDCEPDVWTMNCTLRAFG 144
+ A ME T + +M S EPD +T + ++ F
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
Q+D E + GI+P + + LL + + G E+ + M ++ +V
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+ +I +AGDLK + L + + E + P VT ++ + +G E VL+ +
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S + D F+ L+ Y E+ VLE++++
Sbjct: 528 TASGFLPDVAVFDSLIQGY---STKGEINKVLELIRE 561
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 149/366 (40%), Gaps = 39/366 (10%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E ++F M ++G + + +T L+ + + G KA +++ M +
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR-GLE 252
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY++LI K + + +L MS +G+ P+ VTYNTLI E
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 121 LVKMLSED--CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+ +P+V T N ++ + G++ + + G ++ T+N+L+
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ K +M+ M TY+I+I F + + + E L MR I+P
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 239 -------VTLC---------------------------SLVRAYGHAGKPEKLGSVLRFI 264
V +C +++ AG + +L+ I
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ + D V ++ +++ + + GVL+ M G PD + ++++ YST G
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 325 NHAKEF 330
N E
Sbjct: 553 NKVLEL 558
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 18/320 (5%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTP--------DCQPDVN---TYSILIKSCLKAFAFDKV 82
L+ R G + A L H++ P D P V +Y+ ++ + + D+
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 83 QALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
ALL MS + RPN V+Y L+ A ++ + L M S DV T
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+R ++ ++D + + +GI+P++ ++ LL Y K+G +E + V M +
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+V Y +ID+ + G K+ + +M ++P+ VT L+ G ++
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG---CKPDKVTYRTMVR 316
VL+ + + D V +N L+ + E +LE M RG KP+ VT+ ++++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQ 335
Query: 317 AYSTNGMKNHAKEFQDLVEK 336
G A + + ++E+
Sbjct: 336 GLCDIGRMRQAFQVRAMMEE 355
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 41/360 (11%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++ E+ M+++G ++ F AL+ Y + G+ + A +L+ MK C P+
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC-PNS 400
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI + + D+ ALL+ M + PN VTYNTLI +A++
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE-------------------------K 158
M+ + PD T + G+++ + +E K
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520
Query: 159 FQSA----------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
F A G P+ TFN+LLD K G E ++++ M K+ T+ TY I
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ R D + M S +P+ VT + ++AY G+ + ++ I
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR-----AYSTNGM 323
I+LD+ ++ LV+AYG + GVL M GC+P + TY +++ Y+ GM
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM 700
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 147/341 (43%), Gaps = 5/341 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG CK E A+++F+ M EGC N S+T L+ + G D+A L MK
Sbjct: 232 ILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKED-G 290
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEM 117
C PDV TY++L+ + + + +M GI PN TY LID + + KM M
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E+ L ML + V N + + G ++ + + + P+ T+N L+
Sbjct: 351 EM-LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ + ++ A++ M + S +VTYN +I +A + L LM + P
Sbjct: 410 FCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD 469
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T C+ + GK E+ V + + + L+D Y + + F++ + +
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M GC P+ +T+ ++ G A D++ K D
Sbjct: 530 RMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD 570
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 149/375 (39%), Gaps = 64/375 (17%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + AH LF+ M+ EGC N+ +F LL + G + A SL++ M D +
Sbjct: 514 GYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF-DAK 572
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V+TY+ILI+ L+ FD+ L M + G +PN VTY I AY R E E
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEM 632
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL----- 175
+VK+ E D + + + A+G GQ+D+ + G +PS T++ILL
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIF 692
Query: 176 DSYGKAG---------------------HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Y K G FE ++ + E M + + TY+ +I
Sbjct: 693 EKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLC 752
Query: 215 RAGDLKQMEYLFRLMRSERIKPS-------------------CVTLCSLVRAYGH----- 250
+ L LF M+ I PS + L + Y H
Sbjct: 753 KVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLE 812
Query: 251 -----------AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
G EK + R + + D V + L+D R E + ++M
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872
Query: 300 QQRGCKPDKVTYRTM 314
++ GC+ T+ +
Sbjct: 873 EKTGCRLHSDTHTML 887
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 141/356 (39%), Gaps = 36/356 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ELF M ++GC + ++T L++A+ G +A E M +P+V TY++
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN-GIEPNVYTYTV 335
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-------MELTL 121
LI K D+ +LS M +G+ + V +N LID Y + M + M+L
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 122 V----------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
V KM P++ T N + + +D+
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + G P TF +D K G E+ V E +++ H Y +ID +
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGY 515
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+A LF+ M E P+ +T L+ GK E S++ + D
Sbjct: 516 CKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTV 575
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ L++ R F L+ M GC+P+ VTY ++AY G A+E
Sbjct: 576 HTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEE 631
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 134/338 (39%), Gaps = 27/338 (7%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K ++A L M + N ++ L+ ++ + D A+ L H+ PD T
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL-HHLMIKDGFVPDQRT 472
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ I K ++ + + + N Y LID Y +A+ F++ L +ML
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E C P+ T N L G+++ + +P+++T+ IL++ + F+
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + ++ M +VTY I A+ R G L + E + ++ E I LV
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652
Query: 246 RAYGHAGKPEK-LGSVLRFIDNS--------DIMLDTVFF---------------NCLVD 281
AYG G+ + G ++R D I+L + F N VD
Sbjct: 653 NAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVD 712
Query: 282 AYGRLKC--FAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
K F + + E M ++GC P+ TY +++
Sbjct: 713 NANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKG 750
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 6/329 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSG--LFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
LF+ M+++G + N SF +++A+ + G + KA+ MK C D TY+ LI
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAY-FCGLMKFGFCC--DSFTYTSLIL 233
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K + M +G N V+Y LI + E +M + C P
Sbjct: 234 GYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP 293
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV T + AF G+ K +E+ GI+P++ T+ +L+D + K G ++ ++
Sbjct: 294 DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEML 353
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M + ++V +N +ID + + G ++ + M+ ++ P+ T L+ +
Sbjct: 354 STMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRK 413
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
++ ++L + + + + V +N L+ + + + +M + G PD+ T+
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Query: 312 RTMVRAYSTNGMKNHAKE-FQDLVEKMDE 339
+ G A + F+ L EK E
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAE 502
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 35/290 (12%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-------------- 108
V +Y+ L + D++ L DM G+ PN +++NT+++A+
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214
Query: 109 GRAKM--------FAEMELTLVK-------------MLSEDCEPDVWTMNCTLRAFGNSG 147
G K + + L K M E C + + + F G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ID + + + + G P + T+ +L+ ++ + G + E M + + TY
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ID F + G + + + M + + S V +L+ Y G E VL + +
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLN 394
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ ++ +N L+ + R K +L M + P+ VTY T++
Sbjct: 395 KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 3/264 (1%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
N + +IKSC+ + + + +L+ ++ + +YN L R + E+
Sbjct: 124 NVRNSMIKSCVSS---HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKD 180
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML++ EP++ + N + A G + + + G T+ L+ Y K
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
V E M + V+Y +I F G + + LF M+ + P T
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV A+ GK + + + I + + L+D + ++ E +L M ++G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
V + ++ Y GM A
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDA 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 65/141 (46%)
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V+ + + +S ++ +YN + R G + ++ LF+ M ++ ++P+ ++ ++V A+
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + + D+ + L+ Y ++ + V E+M Q GC ++V
Sbjct: 202 KIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEV 261
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
+Y ++ + G + A E
Sbjct: 262 SYTNLIHGFCEVGKIDEALEL 282
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 78/183 (42%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G ID + ++ + G++P++ +FN +++++ K G+ A + K+ + TY
Sbjct: 169 GLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTY 228
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I + + +L +F +M E + V+ +L+ + GK ++ + +
Sbjct: 229 TSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKE 288
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
D + LV A+ + E E M + G +P+ TY ++ + G +
Sbjct: 289 DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE 348
Query: 327 AKE 329
E
Sbjct: 349 GME 351
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +A L MV +GC + ++ +++ + G D AF+LL M+ +P V Y
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIY 259
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELTLVK 123
+ +I K D L +M T+GIRPN VTY++LI YGR +++ L
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLSD 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV+T + + AF G++ EK Y++ I PSI T++ L++ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 184 FEKMSAVMEYMQKYH-------YSWTI----------------------------VTYNI 208
++ + E+M H Y+ I VTYNI
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I +AGD + +F+ M S+ + P+ +T +L+ GK EK V ++ S
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +N +++ + + + + +G KPD V Y TM+ + G K A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+S LI + +K + + L +M + I P+ VTY++LI+ + E +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+ C PDV T N ++ F +++ + + + G+ + T+NIL+ +A
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M I+TYN ++D + G L++ +F ++ +++P+ T
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ AGK E + + + D V +N ++ + R E + + M++
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ Y T++RA +G + + E
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAEL 593
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 151/326 (46%), Gaps = 4/326 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M+ G + N + ++LL+ Y S +A +L++ M T QP+ T++ LI
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT-GYQPNTVTFNTLI 193
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSEDC 129
+ AL+ M +G +P+ VTY +++ + + ++ L+ KM
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK-RGDTDLAFNLLNKMEQGKL 252
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP V N + +D +++ ++ GI+P++ T++ L+ G + S
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M + + + T++ +IDAF + G L + E L+ M I PS VT SL+ +
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ ++ + F+ + D V +N L+ + + K E V M QRG + V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 310 TYRTMVRAYSTNGMKNHAKE-FQDLV 334
TY +++ G + A+E F+++V
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N + TYSI
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYSI 121
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G PN VT ++L++ Y +K +E + +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T N + + ++ + G QP + T+ ++++ K G +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M++ ++ YN +ID + + LF+ M ++ I+P+ VT SL+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I D F+ L+DA+ + E + + + M +R P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
VTY +++ + + + AK+ F+ +V K
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ MV D + ++++L++ + D+A + E M + C PDV TY+ L
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTL 402
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K ++ + +MS +G+ NTVTYN LI +A + +M+S+
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L +G+++ +E Q + ++P+I T+NI+++ KAG E
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +V YN +I F R G ++ + LF+ M+ + P+ +L+RA
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 250 HAGKPEKLGSVLR 262
G E +++
Sbjct: 583 RDGDREASAELIK 595
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F+ MV +G N ++ LL ++G +KA + E+++ + +P + TY+I+I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMI 508
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L ++S +G++P+ V YNT+I + R E + +M +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
P+ N +RA G + + ++ +S G +T ++
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 44/366 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A M+ EG + +F L+ RS FDKA+ + +K+ D ++ I
Sbjct: 106 DQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKS--KVVLDAYSFGI 163
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRA----KMFAEME-LT 120
+IK C +A F K LL+ + G+ PN V Y TLID YG +F +M+ L
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLG 223
Query: 121 LV---------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
LV M P+ + NC + + N G +D
Sbjct: 224 LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAF 283
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + + + GI + T+NIL+ + F + ++ + K S IVTYNI+I+ F
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD---IM 270
G + LF ++S + P+ VT +L+ Y K E L L + + I
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY---SKVENLAGALDLVKEMEERCIA 400
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
V + L+DA+ RL + + +M++ G PD TY ++ +G MK +K
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL 460
Query: 330 FQDLVE 335
F+ L E
Sbjct: 461 FKSLGE 466
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 1/301 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A LF M G N +++ L++ + + GL + F + E+MK + P+ Y+ LI
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS-GIVPNAYAYNCLI 270
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
DK + ++M +GI +TYN LI R K F E + K+
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + F + G++DT + + + +S+G+ P++ T+N L+ Y K + +
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M++ + + VTY I+IDAF R ++ + LM + P T L+
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ + + + + ++V +N ++ Y + +L M G P+ +
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510
Query: 311 Y 311
+
Sbjct: 511 F 511
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 36/304 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA ++F M ++G ++ L+ R F +A L+ H N P++ TY+I
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV-HKVNKVGLSPNIVTYNI 338
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI D L + + + G+ P VTYNTLI Y + + A L LVK + E
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG-ALDLVKEMEER 397
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C I PS T+ IL+D++ + + EK
Sbjct: 398 C----------------------------------IAPSKVTYTILIDAFARLNYTEKAC 423
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M+K + TY+++I G++K+ LF+ + ++P+ V +++ Y
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +L + +S ++ + F + R + + E + +L M G KP
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Query: 309 VTYR 312
Y+
Sbjct: 544 SLYK 547
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 132/343 (38%), Gaps = 19/343 (5%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------ 55
P KA LF +G + S + +L+ SG+ +A SL+ + +
Sbjct: 19 PTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLT 78
Query: 56 ----TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
TP C Y ++ + + + + D+ L M +G P + T+N L+ R+
Sbjct: 79 QAHFTP-CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRS 137
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
F + + L D ++ ++ +G + + G+ P++ +
Sbjct: 138 NYF-DKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIY 196
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
L+D K G+ + M + TY+++++ F + G ++ ++ M+
Sbjct: 197 TTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
I P+ L+ Y + G +K V + I + +N L+ R K F E
Sbjct: 257 SGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
++ + + G P+ VTY ++ + G M + F L
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQL 359
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 35/330 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ EKA EL M GC+ + ++ L+ + +S +KA + + +K+ C PDV TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I KA + +LL DM GI P VT+N L+D Y +A E KM+S
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + GQ+ + +E+ + G+ P+ T++IL+++ K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ + YN VID F +AG + + + M ++ KP +T L+
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI- 459
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GH K GR+ E + M GC P
Sbjct: 460 -IGHCMK------------------------------GRM---FEAVSIFHKMVAIGCSP 485
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
DK+T +++ GM A + K
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 17/316 (5%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L Q+ EGC S L R + A L + C D T++ILI+
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDR---VEDAMKLFDEHLRFQSCN-DTKTFNILIRGL 216
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLS 126
+K LL MS G P+ VTYNTLI + ++ +MF +++ V
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV---- 272
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + +G++ + GI P+ TFN+L+D Y KAG
Sbjct: 273 --CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M + +VT+ +ID + R G + Q L+ M + + P+ T L+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A + + K +L + + DI+ +N ++D + + E ++E M+++ CKP
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 307 DKVTYRTMVRAYSTNG 322
DK+T+ ++ + G
Sbjct: 451 DKITFTILIIGHCMKG 466
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMELTLVK 123
TY++L +S KA D + M + G+ PN L+ ++ + K+ L L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
E C +N L +++ K ++ +FQS TFNIL+
Sbjct: 165 FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN---DTKTFNILIRGLCG 218
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCV 239
G EK ++ M + IVTYN +I F ++ +L + +F+ ++S + P V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T S++ Y AGK + S+L + I V FN LVD Y + + + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
GC PD VT+ +++ Y G
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVG 361
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+ S T+N+L S KAG + + E M+ S ++ +F G L
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV----LRFIDNSDIMLDTVFFNCL 279
L L++S ++ C+ + SL+ + E + LRF + DT FN L
Sbjct: 159 AL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN----DTKTFNIL 212
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+ + + +L VM GC+PD VTY T+++ + + N A E F+D+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA ++ + +V G T + L++ Y + AF + E MK+ +
Sbjct: 165 GLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-HIR 223
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K K + L+ +M G+ P+ T+NTLIDAYG A +
Sbjct: 224 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV 283
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + + DV + ++AF +G+I + + P+ +N ++D+Y +
Sbjct: 284 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 343
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ ++E M+ S +IVTYN+++ R+ + + E L +R++ ++P V+
Sbjct: 344 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 403
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A + G +K +L+ ++ I ++ LV A +M+ + + M
Sbjct: 404 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 463
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ +P Y MV AY
Sbjct: 464 HKNVEPSSSIYGIMVDAY 481
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA +L M G D + ++F L+ AYG +G +K F++L M+ +
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKS 294
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV ++ ++K+ K + A+L DM + + PN YN++IDAY + + L +
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + + T N L+ S QID E+ ++ G++P + ++N ++ +
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K +++ M KY T+ TY+ ++ A AG + ME L++ M + ++PS
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+V AY K+ S+ + + I D
Sbjct: 475 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 36/357 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M+ +G N ++ LLS R+G D+ L++ M + PD TYSI
Sbjct: 68 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA-SHSMFPDGFTYSI 126
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L ++ L FA K + +L + G
Sbjct: 127 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 186
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P TV YNTLI+ Y + + +M S PD T N + + E
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 246
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + +G+ PS+ TFN L+D+YG AG EK V+ MQ+ ++++ V+ AF
Sbjct: 247 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 306
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ S++ AY +G E+ ++ + NS +
Sbjct: 307 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V +N L+ R E + ++ ++ +G +PD V+Y T++ A G + A E
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 423
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 153/343 (44%), Gaps = 6/343 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L + + A ++F MVD G N ++ ++ + + G + F L + M + P +
Sbjct: 26 LWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--K 83
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY++L+ +A D+ + L+ +M++ + P+ TY+ L D R M
Sbjct: 84 PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSL 143
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ L + +T + L G++ E+ E G+ P+ +N L++ Y +
Sbjct: 144 FAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQ 203
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E M+ H +TYN +I+ + + + E L M + PS T
Sbjct: 204 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 263
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AYG AG+ EK +VL + I D + F +V A+ + E +L+ M
Sbjct: 264 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 323
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ P+ Y +++ AY +G A F LVEKM + ++
Sbjct: 324 YKDVAPNAQVYNSIIDAYIESGDTEQA--FL-LVEKMKNSGVS 363
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 9/298 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S+ +++ RSG A + + M + P+ TY+ +I +K + L
Sbjct: 18 SYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 76
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G +PN VTYN L+ RA E + + +M S PD +T + +G+
Sbjct: 77 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 136
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
TM + + G+ T +ILL+ K G K V+E + T V YN
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ + + DL+ +F M+S I+P +T +L+ K ++ ++ S
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 269 IMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ FN L+DAYG KCF VL MQQ+G K D +++ ++V+A+ NG
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFT----VLSDMQQKGIKSDVISFGSVVKAFCKNG 310
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 140/294 (47%), Gaps = 1/294 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M + ++ AL++ + + KA L+ M+ + P V T++ LI +
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS-GVDPSVETFNTLIDAY 271
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A +K +LSDM +GI+ + +++ +++ A+ + E L M+ +D P+
Sbjct: 272 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 331
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
N + A+ SG + EK +++G+ SI T+N+LL ++ ++ ++
Sbjct: 332 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 391
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ +V+YN +I A GD + L + M I+P+ T +LV A AG+
Sbjct: 392 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 451
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ + + + + ++ + + +VDAY R + +++ + + M ++G D
Sbjct: 452 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD +Y+++I ++ + +M G+ PN +TYNT+ID + +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG--------- 64
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
G ++ + ++ G +P+I T+N+LL +
Sbjct: 65 --------------------------GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCR 98
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ +M+ M + TY+I+ D R G+ + M LF + + T
Sbjct: 99 AGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYT 158
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK K VL + ++ ++ TV +N L++ Y +++ + E M+
Sbjct: 159 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK 218
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
R +PD +TY ++ M A +DLV +M+++
Sbjct: 219 SRHIRPDHITYNALINGLCKLEMVTKA---EDLVMEMEKS 255
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 9/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +Q ++L MV +GC N ++ L+ +YGR+ ++A S+ + M+ CQ
Sbjct: 388 ILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEA-GCQ 446
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D + M + P+T TY+ +I+ G+A
Sbjct: 447 PDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKL 506
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + T + Y Q+AG QP T++I+++ G
Sbjct: 507 FCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGH 566
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH E+ A+ M++ ++ Y +++D +G+ G++++ ++ M + + P+ T
Sbjct: 567 CGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPT 626
Query: 241 LCSLVRAYGHAGKPEK----LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
SL+ A+ + L S+LR + T+ +C +A +M
Sbjct: 627 CNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSF----DMGFCG 682
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
E+M G +++H +F DL+ D
Sbjct: 683 ELMAVTGHPAHMFLLSMPAAGPDGQNVRDHVSKFLDLMHSEDR 725
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +TY+ ++ +A F + LL++M G +PN VTYN LI +YGRA E
Sbjct: 378 DGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 437
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C+PD T + +G +D Y+K Q A + P T++++++ GKA
Sbjct: 438 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 497
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
GH + M +VTYNI+I +A + L+R M++ +P VT
Sbjct: 498 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTY 557
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ GH G E+ ++ + + + D + LVD +G++ + + M
Sbjct: 558 SIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLN 617
Query: 302 RGCKPDKVTYRTMVRAY 318
G P+ T +++ A+
Sbjct: 618 AGLCPNVPTCNSLLSAF 634
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 112/238 (47%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRA+ F + L +M+ + C+P+V T N + ++G + ++
Sbjct: 374 GFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEA 433
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+++ Q AG QP T+ L+D + KAG + + + MQ+ H S TY+++I+
Sbjct: 434 VSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINC 493
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ A + R + N+ D
Sbjct: 494 LGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPD 553
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V ++ +++ G E + + M+++ PD+ Y +V + G + E+
Sbjct: 554 KVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEW 611
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 178 YGKAGHF-EKMSAVMEYMQKYHYSW------TIVTYNIVIDAFGRAGDLKQME------- 223
+G +GH E +S ++ + SW + N ++DA+ LKQ++
Sbjct: 310 FGSSGHVVENVSRILRQL-----SWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALG 364
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + L R K T ++V G A + + +L + + V +N L+ +Y
Sbjct: 365 FFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSY 424
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
GR E V + MQ+ GC+PD+VTY T++ ++ G + A + +KM E L+
Sbjct: 425 GRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALH---MYQKMQEAHLS 481
Query: 344 MKRPD 348
PD
Sbjct: 482 ---PD 483
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA ++ + +V G T + L++ Y + AF + E MK+ +
Sbjct: 343 GLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-HIR 401
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K K + L+ +M G+ P+ T+NTLIDAYG A +
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV 461
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + + DV + ++AF +G+I + + P+ +N ++D+Y +
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 521
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ ++E M+ S +IVTYN+++ R+ + + E L +R++ ++P V+
Sbjct: 522 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A + G +K +L+ ++ I ++ LV A +M+ + + M
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 641
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ +P Y MV AY
Sbjct: 642 HKNVEPSSSIYGIMVDAY 659
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA +L M G D + ++F L+ AYG +G +K F++L M+ +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKS 472
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV ++ ++K+ K + A+L DM + + PN YN++IDAY + + L +
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 532
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + + T N L+ S QID E+ ++ G++P + ++N ++ +
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K +++ M KY T+ TY+ ++ A AG + ME L++ M + ++PS
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+V AY K+ S+ + + I D
Sbjct: 653 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 36/357 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M+ +G N ++ LLS R+G D+ L++ M + PD TYSI
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA-SHSMFPDGFTYSI 304
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L ++ L FA K + +L + G
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P TV YNTLI+ Y + + +M S PD T N + + E
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + +G+ PS+ TFN L+D+YG AG EK V+ MQ+ ++++ V+ AF
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ S++ AY +G E+ ++ + NS +
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V +N L+ R E + ++ ++ +G +PD V+Y T++ A G + A E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 6/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L + + A ++F MVD G N ++ ++ + + G + F L + M + P +
Sbjct: 204 LWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--K 261
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY++L+ +A D+ + L+ +M++ + P+ TY+ L D R M
Sbjct: 262 PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSL 321
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ L + +T + L G++ E+ E G+ P+ +N L++ Y +
Sbjct: 322 FAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQ 381
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E M+ H +TYN +I+ + + + E L M + PS T
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 441
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AYG AG+ EK +VL + I D + F +V A+ + E +L+ M
Sbjct: 442 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ P+ Y +++ AY +G A F LVEKM
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQA--FL-LVEKM 535
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 9/298 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S+ +++ RSG A + + M + P+ TY+ +I +K + L
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G +PN VTYN L+ RA E + + +M S PD +T + +G+
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
TM + + G+ T +ILL+ K G K V+E + T V YN
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ + + DL+ +F M+S I+P +T +L+ K ++ ++ S
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 269 IMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ FN L+DAYG KCF VL MQQ+G K D +++ ++V+A+ NG
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFT----VLSDMQQKGIKSDVISFGSVVKAFCKNG 488
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M + ++ AL++ + + KA L+ M+ + P V T++ LI +
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS-GVDPSVETFNTLIDAY 449
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A +K +LSDM +GI+ + +++ +++ A+ + E L M+ +D P+
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
N + A+ SG + EK +++G+ SI T+N+LL ++ ++ ++
Sbjct: 510 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
++ +V+YN +I A GD + L + M I+P+ T +LV A AG+
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 629
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ + + + + ++ + + +VDAY R + +++ + + M ++G
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 38 GRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIR 95
GR AF LL +PD ++ ++++C+ A D A++ M S
Sbjct: 136 GRHADVRAAFGLLV----AAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPP 191
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ +YN +I R+ ++ +M+ P+ T N + G ++ +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
++ G +P+I T+N+LL +AG ++ +M+ M + TY+I+ D R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G+ + M LF + + T L+ GK K VL + ++ ++ TV
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+N L++ Y +++ + E M+ R +PD +TY ++ M A +DLV
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA---EDLVM 428
Query: 336 KMDET 340
+M+++
Sbjct: 429 EMEKS 433
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 1/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKS 72
L M + G + +T S+ ++ +A LL M K + C P+V TY+ +I
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ K L +M QG+ P+ VTY ++IDA +A+ + EL L +M+S +P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T NC + + SGQ + + S G+ P+I T N + S K G ++ + +
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + +VTY++++ + G M LF M I ++ AYG G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ + + ++ D + ++ A+ R+ A+ M G KP+ + Y
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476
Query: 313 TMVRAYSTNGMKNHAKEF 330
++++ + +G AKE
Sbjct: 477 SLIQGFCMHGNLVKAKEL 494
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 5/332 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q ++ +F+ M +G N + + +S+ + G +A + M +P++ TY
Sbjct: 312 QWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMA-AKGHKPNLVTY 370
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S+L+ F + L + M GI + +N +IDAYG+ M E L +M
Sbjct: 371 SVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQE 430
Query: 127 EDCEPDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PD T + AF G++ D M+K + + + G++P ++ L+ + G+
Sbjct: 431 QGVIPDACTYGIVIAAFSRMGRLADAMDK-FNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489
Query: 186 KMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
K V E M + IV +N +I++ + G + + +F + +P +T SL
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ YG GK EK VL + ++ I D V +N L+D Y R + + M +G
Sbjct: 550 IDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGV 609
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVE 335
KP +TY ++ +G AK+ +++E
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 145/361 (40%), Gaps = 41/361 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF +M G A+ + F ++ AYG+ G+ D+ + M+ PD TY I+I +
Sbjct: 389 LFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ-GVIPDACTYGIVIAAF 447
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPD 132
+ + M G++P + Y++LI + + + + +M+S P+
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPN 507
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + G++ ++ G +P + TFN L+D YG G EK V++
Sbjct: 508 IVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLD 567
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V+YN +ID + R G + LF M S+ +KP+ +T ++ + G
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG 627
Query: 253 KPEK-----------------------LGSVLRFIDNSD--------------IMLDTVF 275
+ LG + R +N D + +
Sbjct: 628 RTVGAKKMCHEMIESGTTMDISTCGIILGGLCR--NNCDDEAIAMFKKLGAMNVKFNIAI 685
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
N ++DA +++ E K + + + G P+ TY M++ G A L+E
Sbjct: 686 INTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745
Query: 336 K 336
K
Sbjct: 746 K 746
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 40/300 (13%)
Query: 62 DVNTYSILIKSCLKA-FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEM 117
DV SIL+K A + D V LL M G+ P+T++YNT++ R++ ++
Sbjct: 153 DVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDL 212
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
T+VK S C P+V T N + G++ + + G+ P + T+ ++D+
Sbjct: 213 LHTMVKK-SGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDA 271
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI--- 234
KA +K V+ M + VTYN +I + +G K+ +FR M S+ +
Sbjct: 272 LCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPN 331
Query: 235 --------------------------------KPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
KP+ VT L+ Y G + ++
Sbjct: 332 IVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ + I+ D FN ++DAYG+ E + MQ++G PD TY ++ A+S G
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 127/312 (40%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M+ G + +L+ + G KA L+ M + +P++ ++ +I
Sbjct: 456 AMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSII 515
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + + + G RP+ +T+N+LID YG + L M+S E
Sbjct: 516 NSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIE 575
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV + N + + +G+ID + + S G++P+ T+ I+L G +
Sbjct: 576 PDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + I T I++ R + +F+ + + +K + + +++ A
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYK 695
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K E+ + I + ++ + + ++ + E + +M++ GC P
Sbjct: 696 VRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755
Query: 311 YRTMVRAYSTNG 322
++R G
Sbjct: 756 LNYIIRVLLEKG 767
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 4/273 (1%)
Query: 10 KAHELFQAMVDEGCD-ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
KA EL M+ G N F +++++ + G +A + + + + + +PDV T++
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGE-RPDVITFNS 548
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K +L M + GI P+ V+YNTLID Y R + + +MLS+
Sbjct: 549 LIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG 608
Query: 129 CEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P T L N G+ + + C+E +S G I+T I+L + ++
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES-GTTMDISTCGIILGGLCRNNCDDEA 667
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A+ + + + + I N +IDA + ++ + LF + + + P+ T +++
Sbjct: 668 IAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKN 727
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
G E+ ++ ++ S + N ++
Sbjct: 728 LLKEGSVEEADNMFSLMEKSGCAPSSRLLNYII 760
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID-TMEK 154
P TYN L+D R + + L + DV + L+ ++ + D +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY--SWTIVTYNIVIDA 212
+ G++P ++N ++ + + ++ ++ M K S +VTYN VI
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
R G++ + LF M + + P VT S++ A A +K VLR + ++ +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V +NC++ Y + E G+ M +G P+ VT + + + +G A EF D
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 104/290 (35%), Gaps = 50/290 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + EKA + AM+ G + + S+ L+ Y R+G D
Sbjct: 554 GLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL--------------- 598
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA-------YGRAKMFA 115
L +M ++G++P T+TY ++ G KM
Sbjct: 599 ---------------------ILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCH 637
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
E M+ D+ T L + D ++K + ++ +I N ++
Sbjct: 638 E-------MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMI 690
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D+ K E+ + + + TY ++I + G +++ + +F LM
Sbjct: 691 DAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCA 750
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
PS L ++R G+ K G+ + +D I L+ + L+ + R
Sbjct: 751 PSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 1/174 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M++ G + + +L R+ D+A ++ + + + + ++ + +I
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKL-GAMNVKFNIAIINTMI 690
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K ++ + L +S G+ PN TY +I + E + M C
Sbjct: 691 DAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCA 750
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P +N +R G+I K I +T ++L+ + + G +
Sbjct: 751 PSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKY 804
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 41/359 (11%)
Query: 3 GKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK H E+ M+ EG D + ++ +++S + G +A L+ M T DC
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI-TRDCS 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AEMEL 119
P+ TY+ LI + K ++ L ++++GI P+ T+N+LI + MEL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M S+ CEPD +T N + + + G++D ++ + +G S+ T+N L+D +
Sbjct: 423 -FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA--------------------------- 212
KA + + + M+ + S VTYN +ID
Sbjct: 482 KANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKF 541
Query: 213 --------FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
F R GD+K+ + + M S +P VT +L+ AG+ E +LR I
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQQRGCKPDKVTYRTMVRAYSTNG 322
I L +N ++ R + E + E+++Q PD V+YR + R G
Sbjct: 602 QMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 36/362 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ + M + GC+ T F L+ +Y + L D+ ++ M + +P
Sbjct: 93 LGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKP 152
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + Y+ ++ + V+ + MS GI+P+ T+N LI A RA L L
Sbjct: 153 DTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------ 163
M S PD T ++ + G +D + E+ G
Sbjct: 213 EDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 164 --IQPSIN----------------TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
++ ++N TFN L++ KAGH + +M+ M + Y + T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN VI + G++K+ M + P+ VT +L+ + E+ + R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ I+ D FN L+ + + E M+ +GC+PD+ TY ++ + + G +
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 326 HA 327
A
Sbjct: 453 EA 454
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 4/323 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK+ E A Q M ++ G + +F L++ ++G A +++ M
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GY 326
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ +I K + L M T+ PNTVTYNTLI + E
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ S+ PDV T N ++ + + +E+ +S G +P T+N+L+DS
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++ +++ M+ + +++TYN +ID F +A +++ E +F M + + V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + + E ++ + D +N L+ + R + +++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
GC+PD VTY T++ G
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAG 589
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELF+ M +GC+ + ++ L+ + G D+A ++L+ M+ + C V TY+ LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLI 477
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA + + + +M G+ N+VTYNTLID +++ + + +M+ E +
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T N L F G I + S G +P I T+ L+ KAG E S +
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYG 249
+ +Q + T YN VI R + LFR ++ P V+ + R
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLC 657
Query: 250 HAGKP 254
+ G P
Sbjct: 658 NGGGP 662
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 3/327 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + + MV+ GC + S ++ + + G + A + ++ M N PD T++ L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ M +G P+ TYN++I + E L +M++ DC
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N + Q++ + S GI P + TFN L+ + +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M+ TYN++ID+ G L + + + M S +T +L+ +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A K + + ++ + ++V +N L+D + + + +++ M G KPDK T
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFT 542
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKM 337
Y +++ + G K+ D+V+ M
Sbjct: 543 YNSLLTHFCRGG---DIKKAADIVQAM 566
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 18/312 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ +L GRSG FD +LE MKN+ C+ + + ILI+S + D++ ++ M
Sbjct: 86 YEEILLRLGRSGSFDDMRKILEDMKNS-GCEMGTSPFLILIESYAQFELQDEILGVVHWM 144
Query: 90 STQ-GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
G++P+T YN +++ +E+ KM +PDV T N ++A + Q
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ E S G+ P TF ++ Y + G + + E M ++ SW+ V+ N+
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 209 VIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F + G ++ + ++ + + P T +LV AG V I+
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH------VKHAIEIM 318
Query: 268 DIML------DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
D+ML D +N ++ +L E L+ M R C P+ VTY T++ ST
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLI---STL 375
Query: 322 GMKNHAKEFQDL 333
+N +E +L
Sbjct: 376 CKENQVEEATEL 387
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 4/290 (1%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A L P+ P+ Y ++ ++ +FD ++ +L DM G T + LI
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILI 125
Query: 106 DAYGRAKMFAEMELTLVKMLSED--CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
++Y + ++ E+ L +V + +D +PD N L + + +E + K G
Sbjct: 126 ESYAQFELQDEI-LGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWG 184
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+P ++TFN+L+ + +A ++E M Y T+ ++ + GDL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGAL 244
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD-IMLDTVFFNCLVDA 282
+ M S V++ +V + G+ E + ++ + N D D FN LV+
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ +++VM Q G PD TY +++ G A EF D
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 35/330 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ EKA EL M GC+ + ++ L+ + +S +KA + + +K+ C PDV TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ +I KA + +LL DM GI P VT+N L+D Y +A E KM+S
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + GQ+ + +E+ + G+ P+ T++IL+++ K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ + YN VID F +AG + + + M ++ KP +T L+
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI- 459
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
GH K GR+ E + M GC P
Sbjct: 460 -IGHCMK------------------------------GRM---FEAVSIFHKMVAIGCSP 485
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
DK+T +++ GM A + K
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 17/316 (5%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L Q+ EGC S L R + A L + C D T++ILI+
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDR---VEDAMKLFDEHLRFQSCN-DTKTFNILIRGL 216
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLS 126
+K LL MS G P+ VTYNTLI + ++ +MF +++ V
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV---- 272
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C PDV T + + +G++ + GI P+ TFN+L+D Y KAG
Sbjct: 273 --CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ M + +VT+ +ID + R G + Q L+ M + + P+ T L+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A + + K +L + + DI+ +N ++D + + E ++E M+++ CKP
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 307 DKVTYRTMVRAYSTNG 322
DK+T+ ++ + G
Sbjct: 451 DKITFTILIIGHCMKG 466
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMELTLVK 123
TY++L +S KA D + M + G+ PN L+ ++ + K+ L L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGK 180
E C +N L +++ K ++ +FQS TFNIL+
Sbjct: 165 FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN---DTKTFNILIRGLCG 218
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCV 239
G EK ++ M + IVTYN +I F ++ +L + +F+ ++S + P V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T S++ Y AGK + S+L + I V FN LVD Y + + + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
GC PD VT+ +++ Y G
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVG 361
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+ S T+N+L S KAG + + E M+ S ++ +F G L
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV----LRFIDNSDIMLDTVFFNCL 279
L L++S ++ C+ + SL+ + E + LRF + DT FN L
Sbjct: 159 AL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN----DTKTFNIL 212
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+ + + +L VM GC+PD VTY T+++ + + N A E F+D+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 39/368 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ KA L MV+ GC + ++ ++++ RSG AF +L M+ + + DV TY
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEER-NVKADVFTY 231
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +I S + D +L +M T+GI+ + VTYN+L+ +A + + L L M+S
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+V T N L F G++ + Y++ + GI P+I T+N L+D Y +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 187 MSAVMEYMQKYHYSWTI-----------------------------------VTYNIVID 211
+ +++ M + S I VTY+I++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
F ++G +K E LF+ M S + P +T L+ GK EK + + S + L
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
V + +++ + + + + +G KP+ +TY M+ G E
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG---SLSEAN 528
Query: 332 DLVEKMDE 339
L+ KM+E
Sbjct: 529 ILLRKMEE 536
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M +G ++ ++ +L+ ++G ++ LL+ M + + P+V T+++
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNV 303
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ +K + L +M T+GI PN +TYNTL+D Y +E L M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T ++ + ++D K + G+ + T++IL+ + ++G +
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + ++TY I++D G L++ +F ++ ++ V +++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK E ++ + + + + + ++ + +E +L M++ G P+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 309 VTYRTMVRAYSTNG 322
TY T++RA+ +G
Sbjct: 544 CTYNTLIRAHLRDG 557
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD T++ LI K L+ M G +P+ VTYN++++ R+ +
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM + + DV+T + + + G ID +++ ++ GI+ S+ T+N L+
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + +++ M ++T+N+++D F + G L++ L++ M + I P+ +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y + + ++L + + D V F L+ Y +K + V +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+RG + VTY +V+ + +G A+E FQ++V
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 141/316 (44%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A LFQ M+ F+ SA R+ F+ + ++ ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTL 126
Query: 67 SILI----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+I+I + C FA+ ++L + G P+T T+NTLI+ ++ + +
Sbjct: 127 NIMINCFCRCCKTCFAY----SVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVD 182
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ C+PD+ T N + SG K + ++ + T++ ++DS + G
Sbjct: 183 RMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M+ ++VTYN ++ +AG L + M S I P+ +T
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + GK ++ + + + I + + +N L+D Y +E +L++M +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 303 GCKPDKVTYRTMVRAY 318
C PD VT+ ++++ Y
Sbjct: 363 KCSPDIVTFTSLIKGY 378
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 10/304 (3%)
Query: 39 RSGLFD----KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
RSG+ D A +L + M ++ P P + +S + + F+ V + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRP--LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I N T N +I+ + R L K++ EPD T N + G++
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ G QP + T+N +++ ++G ++ M++ + + TY+ +ID+
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + LF+ M ++ IK S VT SLVR AGK +L+ + + +I+ +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN L+D + + E + + M RG P+ +TY T++ Y M+N E ++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC---MQNRLSEANNM 355
Query: 334 VEKM 337
++ M
Sbjct: 356 LDLM 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELFQ MV G + ++ LL +G +KA + E ++ + + Y+ +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTII 480
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + L + +G++PN +TY +I + +E + L KM +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
P+ T N +RA G + K E+ +S G ++ +++D
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 1/206 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + ++F+ + G AN +++ L+ + +SG A L + M + PDV T
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMT 440
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y IL+ +K + D+ + V Y T+I+ + + +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +P+V T + G + K + G P+ T+N L+ ++ + G
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVID 211
+ ++E M+ +S + +VID
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVID 586
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 161/400 (40%), Gaps = 77/400 (19%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ Q E AH+LF M G + S+ AL+ + +G D+A L M
Sbjct: 171 ILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT---- 226
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QPD+ T++ L+K A ++ +L M G RP T Y L+D + R + E E
Sbjct: 227 -QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAE 285
Query: 119 LTLVKMLS-----------------------------------EDCEPDVWTMNCTLRAF 143
L +M + CEP+VWT N ++ F
Sbjct: 286 KILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGF 345
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
N+G++ ++ + G++P + T+N+L+ GH ++ M+ +
Sbjct: 346 CNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQ 405
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR- 262
TYN++IDA + G + + LF + I+P+ VT +++ AGK + + L
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLEN 465
Query: 263 ---------------FIDN-------------------SDIMLDTVFFNCLVDAYGRLKC 288
FI+N D+ TV + +++ +
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + M +GC PD VTY T VRAY G + A+
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAE 565
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 138/341 (40%), Gaps = 36/341 (10%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ E+A ++ M D G + T +++AY R G A + E M+ C+P+V T
Sbjct: 279 QKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFK-GCEPNVWT 337
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +++ A K ALL M G+ P+ VTYN LI L M
Sbjct: 338 YNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLME 397
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
D +T N + A +G++D ++ + GI+P+ TFN +++ KAG F+
Sbjct: 398 GNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFD 457
Query: 186 KMSAVMEYM-------QKYHYSWTI----------------------------VTYNIVI 210
+E M Y YS I V Y IVI
Sbjct: 458 VACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVI 517
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ + ++ M S+ P VT + VRAY + G+ ++ +V+ + +
Sbjct: 518 NRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTI 577
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
+D + +N L+D + + +L+ M P+ T+
Sbjct: 578 VDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 155/371 (41%), Gaps = 52/371 (14%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L + M G A+ ++ L+ A ++G D+A SL + ++ +P+ T++ +I
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVI 447
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK------------------ 112
KA FD L +M + G P+T TY+ I+ + K
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVK 507
Query: 113 ------------MFAEMELTLV-----KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+F E L +M+S+ C PDV T ++RA+ N G++D E
Sbjct: 508 PSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENV 567
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY-----HYSWTIVTYNIVI 210
+ + +N L+D + G ++ ++++M H+++ I+ +++
Sbjct: 568 VTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQ 627
Query: 211 DAFGRAGDLKQMEY-----------LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
LK LF LM+ + S T S++ + + +++ S
Sbjct: 628 RRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTS 687
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
++ + ++ L+ +N LV+ + +L+ +++ +L M G P+ + Y+ ++ +
Sbjct: 688 LVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLT 747
Query: 320 TNGMKNHAKEF 330
G + AKE
Sbjct: 748 AEGQADRAKEI 758
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 39/343 (11%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+ F +LL+ + R L L HM P TY+ LI++ + Q LS
Sbjct: 94 RPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLS 153
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAK-------MFAEMEL--------------------- 119
M G RP+ T+N+LI Y R + +F +M
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAG 213
Query: 120 ---TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+++ E +PD++T ++ ++G+ + +K + G +P+ + L+D
Sbjct: 214 RIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVD 273
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ + E+ ++ M +VT IV++A+ R G + +F MR + +P
Sbjct: 274 LWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEP 333
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG-- 294
+ T ++V+ + +AGK K ++L + + D V +N L+ R +C G
Sbjct: 334 NVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLI----RGQCIDGHIGSA 389
Query: 295 --VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+L +M+ G D+ TY ++ A G + A D +E
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 138/408 (33%), Gaps = 93/408 (22%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------ 55
L K + ++A LF + G N+ +F +++ ++G FD A + LE+M +
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474
Query: 56 ----TP------------------------DCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+P D +P Y+I+I + +
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWG 534
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M +QG P+ VTY T + AY E E + +M D N + + G
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIG 594
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILL----------------DSYGKAGHFEKMSAVM 191
Q D + P+ TF ILL S K + +
Sbjct: 595 QTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELF 654
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI----------------- 234
E M+K + TY +++ F L ++ L LM+ E +
Sbjct: 655 ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKL 714
Query: 235 ---KPSCVTLCSLVRAYGHA------------------GKPEKLGSVLRFIDNSDIMLDT 273
+ LCS++ GH G+ ++ + R + D
Sbjct: 715 RMYSDAWALLCSMI---GHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDE 771
Query: 274 VFFNCLVDAYGRLKCFAEM-KGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + ++D + R K A+M ++ +++Q CKP TY + T
Sbjct: 772 IVWKVIIDGFIR-KGHADMCHDMISMLEQMKCKPSDETYAMLTEELPT 818
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK---NTPDC- 59
K K+ A+ELF+ M+ +GC N ++TAL+ Y +SG +KA + M+ + PD
Sbjct: 571 KAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630
Query: 60 -----------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+P+V TY L+ KA + LL M G PNT+ Y+ LID +
Sbjct: 631 MYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGF 690
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+A E + KM+ P+V+T + + ++D + K K P+I
Sbjct: 691 CKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNI 750
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++D K ++ +M M++ +VTY +ID FG+AG + + LFR
Sbjct: 751 VIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M S+ P+ VT L+ G ++ ++L + + + +++ Y R
Sbjct: 811 MGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE-- 868
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE +++ G P + Y+ ++ + G A E
Sbjct: 869 FILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 911
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA----FSLLEHMKNTP 57
L K + + A +L + M +GC+ NT + AL+ + ++ D+A ++EH N
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYN-- 712
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P+V TYS LI K D V +LS M PN V Y +ID + E
Sbjct: 713 ---PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++ M + C+P+V T + FG +G++D + + + S G P+ T+ +L++
Sbjct: 770 YKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINH 829
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
GH ++ A++E M++ ++ + +Y VI+ + R
Sbjct: 830 CCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 867
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 23/347 (6%)
Query: 9 EKAHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
E A + + M+ G N SF L +G+ F+KA+ ++ M PD +T
Sbjct: 436 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGN-GFVPDTST 491
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS +I A + L +M G+ P+ TY LID + +A + + L +M+
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ CEP V T + A+ + ++ + +E + G P++ T+ L+D Y K+G+ E
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611
Query: 186 KMSAVMEYMQ----------------KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K + M+ +VTY ++D +A +K L M
Sbjct: 612 KACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+ +P+ + +L+ + A K ++ V + + ++ L+D + K
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 731
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ VL M + C P+ V Y M+ S + A + ++E+
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 131/353 (37%), Gaps = 74/353 (20%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--- 95
R+GL++ A L +K+ +P TY+ L++ L+A D Q + +MS G+
Sbjct: 218 RNGLWNVALEELGRLKDF-GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 96 -----------------------------PNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
PNT+ YN +I A F E L +M S
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+V T L N Q+ ++ + G PS FN L+ +Y K+ F
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL------KQMEYLFRLMRSERIKPSCVT 240
+++ M+K V YNI+I + G+L + E + M S + V
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456
Query: 241 LCSLVRAYGHAGKPEKLGSVLR------FIDNSDIMLDTVFFNC---------------- 278
+ S R GK EK V+ F+ ++ + + F C
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516
Query: 279 -------------LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
L+D + + + L+ M + GC+P VTY T++ AY
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 52/252 (20%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A++L M ++GC N ++TA++ +G++G DK L M + C P
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM-GSKGCAP 818
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY++LI C D+ ALL +M + +Y +I+ Y R E L+L
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR-----EFILSL 873
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
G ++ +EK G P I + +L+D++ KA
Sbjct: 874 -------------------------GLLEEVEK-------NGSAPIILLYKVLIDNFVKA 901
Query: 182 G--------HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
G H E +SA M K + Y +I +F A + LF M +
Sbjct: 902 GRLEVALELHKEVISASMSMAAKKN------LYTSLIYSFSYASKIGHAFELFYDMIRDG 955
Query: 234 IKPSCVTLCSLV 245
+ P T L+
Sbjct: 956 VIPDLGTFVHLL 967
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + +K ELF+ M +GC N ++T L++ +G D+A++LLE MK T
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY-WPK 853
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
V++Y +I+ + F LL ++ G P + Y LID + GR ++ E+
Sbjct: 854 HVSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 911
Query: 119 LTLVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
++ +S + +++T + +F + +I + + G+ P + TF LL
Sbjct: 912 KEVISASMSMAAKKNLYT--SLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMG 969
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSW 201
+ +E+ + + + + +W
Sbjct: 970 LIRVRRWEEALQLSDSLCQMDINW 993
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 5/249 (2%)
Query: 1 MLGKCKQPEKAHELF-QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L K PE + F A G D + ALL + R G +D+ D
Sbjct: 144 ILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFER-GSYDRVPEEFLREIRGDDK 202
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+ ++LI+ C + ++ L + G +P +TYN L+ + RA +L
Sbjct: 203 EVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL 262
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M D +T+ +A G+ EK P+ +N ++
Sbjct: 263 VHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLC 319
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A FE+ + M+ + TY I++ L + + + +M +E PS
Sbjct: 320 EASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379
Query: 240 TLCSLVRAY 248
SLV AY
Sbjct: 380 IFNSLVHAY 388
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 19/355 (5%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + EL MV++G N S++ L++ SG + AFSLL M C
Sbjct: 254 GLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKR-GCH 312
Query: 61 PDVNTYSILIKSC-LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+++T S L+K C ++ FD + + G++PN V YNTL+ + +
Sbjct: 313 PNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVS 372
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M C P++ T + F G ++ + K ++G P++ + ++++
Sbjct: 373 VFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALC 432
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSC 238
+ F++ +++E M K + + ++ T+N I AG L E +FR M + R P+
Sbjct: 433 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNI 492
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV--- 295
VT L+ A + E+ + R I + T +N L+ C A + G+
Sbjct: 493 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHG----SCNAGLPGIALQ 548
Query: 296 -LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK-RPD 348
+ M G PD++T ++ AY G A + DLV +C K RPD
Sbjct: 549 LVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLV-----SCGRRKWRPD 598
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 147/322 (45%), Gaps = 20/322 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A +L M ++GC N S+T ++S+ G+ + L E +P
Sbjct: 190 LCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF------EP 243
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+ Y+ LI K + L+S+M +GI PN ++Y+TLI+ + L
Sbjct: 244 VVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLL 303
Query: 122 VKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML C P++ T++ ++ F D ++ + + G+QP++ +N L+ +
Sbjct: 304 AQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCS 363
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ +K +V +M++ S I TY +I+ F + G L+ Y++ M + P+ V
Sbjct: 364 HGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVV 423
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRL----KCFAEMK 293
S+V A K ++ S++ + + FN + GRL K F +M+
Sbjct: 424 YTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 483
Query: 294 GVLEVMQQRGCKPDKVTYRTMV 315
QQ C P+ VTY ++
Sbjct: 484 ------QQYRCPPNIVTYNELL 499
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 18/346 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E+F + + GCD + + + +L + + MK +P+V TY++
Sbjct: 127 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD-GFEPNVFTYNV 185
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+K+ K D + LL +MS +G PN V+Y T+I + M E + L+E
Sbjct: 186 LLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG-----RQLAER 240
Query: 129 CEPDVWTMNCTLRAFGNS----GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
EP V N + G ++ M + EK GI P++ +++ L++ +G
Sbjct: 241 FEPVVSVYNALINGLCKERDYKGGVELMSEMVEK----GISPNVISYSTLINELSNSGQI 296
Query: 185 EKMSAVMEYMQKYHYSWTIVTYN-IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E +++ M K I T + +V F R ++ +++R ++P+ V +
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
LV+ + G +K SV ++ + + L++ + + + M G
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
C P+ V Y +MV A + + KE + L+E M + A P F
Sbjct: 417 CCPNVVVYTSMVEALCRH---SKFKEAESLIEIMSKENCAPSVPTF 459
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 134/317 (42%), Gaps = 7/317 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q + L Q M +G + F +++S Y + GL ++A + +K C P V Y
Sbjct: 90 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF-GCDPSVKIY 148
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ ++ + L + + DM G PN TYN L+ A + + LV+M +
Sbjct: 149 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 208
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ C P+ + + + G + + E+F +P ++ +N L++ K ++
Sbjct: 209 KGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKG 263
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+M M + S +++Y+ +I+ +G ++ L M P+ TL SLV+
Sbjct: 264 GVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVK 323
Query: 247 A-YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + L + I + + V +N LV + + V M++ GC
Sbjct: 324 GCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCS 383
Query: 306 PDKVTYRTMVRAYSTNG 322
P+ TY +++ ++ G
Sbjct: 384 PNIRTYGSLINGFTKRG 400
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M+ GC N +T+++ A R F +A SL+E M + +C P V T++
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIM-SKENCAPSVPTFNA 461
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
IK A D + + M Q PN VTYN L+D +A E ++
Sbjct: 462 FIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 521
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
E T N L N+G + K G P T N+++ +Y K G E+
Sbjct: 522 GVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERA 581
Query: 188 SAVMEYMQKYHYSWT--IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+++ + W +++Y VI R+ + LF M SERI P ++C
Sbjct: 582 VQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIPILRSVC 638
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 7/259 (2%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
T+ ++I+ D VQ LL M QG + + ++I Y R AE + +
Sbjct: 77 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY-RQVGLAERAVEMFYR 135
Query: 125 LSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ E C+P V N L +I + Y + G +P++ T+N+LL + K
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++ M V+Y VI + G +K+ L +ER +P +
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEPVVSVYNA 250
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ + ++ + I + + ++ L++ +L M +RG
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310
Query: 304 CKPDKVTYRTMVRAYSTNG 322
C P+ T ++V+ G
Sbjct: 311 CHPNIHTLSSLVKGCFVRG 329
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 148/312 (47%), Gaps = 4/312 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL--LEHMKNTPDCQPDVNTYS 67
+A + ++M G T S+ A++ A G+ G+ D F+L M C PD T++
Sbjct: 41 EAMGVLESMKGAGLRPTTVSYNAVIDACGKGGV-DLRFTLGYFRQMLQDGLC-PDRKTFN 98
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+ +C +A + + + +M G + TYNT +DA + ++ M +
Sbjct: 99 SLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEAN 158
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ +P+V T + + F + D K EK +S GIQ +N LL Y K G ++++
Sbjct: 159 NIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEI 218
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ V E M+ VTYN +I+ +G+ G L + +L + MR++ + PS +T +L+
Sbjct: 219 ATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDI 278
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y AG +V S + D V F+ +D + +L+ M + G KP+
Sbjct: 279 YSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPN 338
Query: 308 KVTYRTMVRAYS 319
VTY T++ A+
Sbjct: 339 VVTYNTIIDAFG 350
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 41/324 (12%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P+ A F + + + + +AL+SAY RSGL +A +LE MK
Sbjct: 3 RPDLARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGA---------- 52
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL---VK 123
G+RP TV+YN +IDA G+ + ++ TL +
Sbjct: 53 --------------------------GLRPTTVSYNAVIDACGKGGV--DLRFTLGYFRQ 84
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML + PD T N L A +G ++ +++ G I T+N +D+ K G+
Sbjct: 85 MLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGN 144
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E + V+ M+ + +VTY+ ++D F + + L M+S I+ V +
Sbjct: 145 MELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNT 204
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y GK +++ +V ++N I DTV +N L++ YG+ + +++ M+ +G
Sbjct: 205 LLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 264
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
P +TY T++ YS GM A
Sbjct: 265 VAPSVLTYSTLIDIYSKAGMHGDA 288
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F+ M+ +G + ++F +LL+A R+G + A ++ + M + + D+ TY+ + +
Sbjct: 82 FRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGR-DIYTYNTFVDAIC 140
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + ++ DM I+PN VTY+TL+D + + + + E KM S + D
Sbjct: 141 KCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRV 200
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
N L + +G+ D + E ++ GI+ T+N L++ YGK G + ++ +++ M
Sbjct: 201 CYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDM 260
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ + +++TY+ +ID + +AG ++ + +K V S + G
Sbjct: 261 RAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLV 320
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
E S+L + I + V +N ++DA+G+ K E
Sbjct: 321 ECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE 357
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC E A ++ M N +++ L+ + + +D+A L E MK+ Q D
Sbjct: 141 KCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSL-GIQLDR 199
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ L+ +K +D++ + DM GI +TVTYN+LI+ YG+ + +
Sbjct: 200 VCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQD 259
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ P V T + + + +G Y F+ +G++ + F+ +D+ K G
Sbjct: 260 MRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGL 319
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
E ++++ M K +VTYN +IDAFG++ L +
Sbjct: 320 VECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE 357
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + + L Q M +G + +++ L+ Y ++G+ AF++ K + + D
Sbjct: 245 GKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKES-GLKAD 303
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +S I + K + +LL +M GI+PN VTYNT+IDA+G++K+ E + +
Sbjct: 304 VVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEEDPGNM 363
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC---------YEKFQSAGIQPSINTFNI 173
++ V N R G S M + ++K G++P++ TF+
Sbjct: 364 GIVGVYGGQIVRATNPVTRG-GRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSA 422
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+L++ + +FE + ++E ++ + S V Y +++
Sbjct: 423 ILNACSRCNNFEDAALLLEQLRLFDNSVYGVAYGLLM 459
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 20/335 (5%)
Query: 3 GKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P++A ++FQ M + GC +S+ +LL+A S +D+A S + + T P
Sbjct: 89 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFE-TMGLSP 147
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ILIK + FDK + LL+ M QG P+ +Y TLI++ + ++
Sbjct: 148 NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLF 207
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK-FQSAGIQPSINTFNILLDSYGK 180
+M PDV N + F G I + +E+ + + P+I ++N++++ K
Sbjct: 208 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F++ + M+K + TY+ +I +G+L +++ M + P V
Sbjct: 268 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 327
Query: 241 LCSLVRAYGHAGKPE---KLGSVL-----RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+++ Y AG+ E +L V+ R + + +I++ +F N VD E
Sbjct: 328 YNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVD---------EA 378
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ E++ ++ C D +TY +V NG N A
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 146/308 (47%), Gaps = 4/308 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++ AY ++ + D+A + + M CQP + +Y+ L+ + +++ +D+ ++ T
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+ PN TYN LI R K F + + L M + PDV++ + + +G +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW-TIVTYNIVID 211
K +++ G+ P + +NIL+D + K G S + E + K + I +YN++I+
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 212 AFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ G + E R+ ++ER + T +L+ +G + V + + + +
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D V +N +++ Y R E + +VM++ GC+ V+Y ++R N + A
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381
Query: 331 QDLVEKMD 338
+L+ + D
Sbjct: 382 WELLPEKD 389
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 4/333 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
KQ +KA EL M ++G + S+ L+++ ++G A L + M PDV
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER-GVTPDVAC 221
Query: 66 YSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ILI K + + + PN +YN +I+ + F E +M
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ D++T + + SG +D + Y++ G+ P + +N +L+ Y +AG
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ + + M+K T+V+YNI+I + + ++ L+ + +T L
Sbjct: 342 EECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V G K S+L +N LDT ++ +++ R E+ GVL+ M + GC
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460
Query: 305 KPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
KP+ ++ + + +++ + F ++V K
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 137/316 (43%), Gaps = 5/316 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--Y 66
++A +++ + ++ C A++ ++ L+ ++G +KA S+LE +N + D++T Y
Sbjct: 376 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG---RGDLDTFAY 432
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +I + D+V +L M+ G +PN N +I+ + RA + M+S
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ C P V T N + + + ++ G +P++ T+++L++ + +
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + + + +NI+I +G ++ L+ M+ + P+ VT +L+
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLME 612
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ E+ + I D + +N + ++ G L RG P
Sbjct: 613 GFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 672
Query: 307 DKVTYRTMVRAYSTNG 322
+T+ +VRA NG
Sbjct: 673 TAITWNILVRAVLDNG 688
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 134/309 (43%), Gaps = 2/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL++ M EGC S+ L+ + D+A S+ E + DC D TY +
Sbjct: 342 EECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGV 399
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K +K ++L + +T Y+++I+ R E+ L +M
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P+ N + F + +++ + + S G P++ T+N L++ KA F +
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+++ M + ++TY+++++ + L L+ + KP ++
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+GK E + + + + V N L++ + +++ F + + + Q G +PD
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDI 639
Query: 309 VTYRTMVRA 317
++Y ++
Sbjct: 640 ISYNITLKG 648
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ- 60
L K ++ +A+ L + M+ +G N +++ L++ + D A +L CQ
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW--------CQA 560
Query: 61 ------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PDV ++I+I + + L S+M + PN VT+NTL++ + + + F
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+L +PD+ + N TL+ + +I G+ P+ T+NIL
Sbjct: 621 ERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 680
Query: 175 L 175
+
Sbjct: 681 V 681
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-Q 60
L + ++PE+A EL + M + G + FT L+ A R G A +L++ +K + C +
Sbjct: 55 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS--CLE 112
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y++ I KA D ++ QG++P+ V+Y ++I +A E E
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M +E P + N + +G++G+ + K E+ + G PS+ +FN +L GK
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ ++ E M+K TYNI+ID G +++ + M + P+ +T
Sbjct: 233 KRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ +V A K E+ + D V + L+D G+ E + E M
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G + V Y +++R + +G K K F++L+ +
Sbjct: 352 DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 161/385 (41%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E A++L + + + GC + SF ++L+ G+ D+A SL E MK D +P+
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPN 253
Query: 63 VNTYSILIKS-CL----------------------------------KAFAFDKVQALLS 87
+TY+I+I CL KA ++ +
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML---------------------- 125
S +G P+ VTY +LID G+ E KML
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373
Query: 126 -SED------------CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
ED C+PD+ +N + +G+++ +E +S G P + +++
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
IL+ KAG + S + M++ ++ YN V+D F ++G + + + M+ +
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
++P+ T ++V + ++ + + I L+ V ++ L+D +G++ E
Sbjct: 494 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 553
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
+LE M ++G P+ T+ +++ A
Sbjct: 554 YLILEEMMKKGLTPNVYTWNSLLDA 578
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q + +F AM +G + +++ A++ + +SG KA+ +LE MK QP
Sbjct: 439 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC-VQP 497
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY ++ K D+ L + ++GI N V Y++LID +G+ E L L
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 557
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + P+V+T N L A + +I+ C++ + P+ T++IL++ +
Sbjct: 558 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 617
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ K + MQK +VTY +I + G++ LF ++ P +
Sbjct: 618 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 677
Query: 242 CSLVRAYGHAGK 253
+L+ +A +
Sbjct: 678 NALIEGMSNANR 689
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 155/360 (43%), Gaps = 17/360 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK Q ++A+ LF+ M+D G +AN +T+L+ + G + + + + C+P
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR-GCKP 392
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ + + KA +K + + D+ + G P+ +Y+ LI +A E
Sbjct: 393 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 452
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + D N + F SG++ + E+ + +QP++ T+ ++D K
Sbjct: 453 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 512
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + E + +V Y+ +ID FG+ G + + + M + + P+ T
Sbjct: 513 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 572
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ A A + + + + +T ++ L++ R++ + + + MQ+
Sbjct: 573 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 632
Query: 302 RGCKPDKVTYRTMVR----------AYS------TNGMKNHAKEFQDLVEKMDETCLAMK 345
+G P+ VTY TM+ AYS NG A F L+E M AM+
Sbjct: 633 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 692
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 5/342 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + +A ELF M E ++ ++ YG +G F+ A+ LLE ++ C
Sbjct: 159 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER-GCI 217
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ ++ K D+ +L M PN+ TYN +ID E
Sbjct: 218 PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRI 276
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M P++ T+N + + +++ K +E G P T+ L+D GK
Sbjct: 277 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + E M ++ V Y +I F G + +F+ + KP
Sbjct: 337 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L + + AG+ EK + I + + D ++ L+ + E + M+
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
Q+G D Y +V + +G + A E ++E+M E C+
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYE---ILEEMKEKCV 495
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 42/347 (12%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
Q+ L +A R+ D A + M+ +P + Y++LI + +A ++ LL
Sbjct: 10 NQACADLAAALVRARRLDDAVLAVAVMRRL-KFRPAFSAYTVLIGALAEARRPERALELL 68
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFGN 145
M G + TL+ A R A+ L LV + C EPD+ N + FG
Sbjct: 69 RQMQEVGYEVGVHLFTTLVRALAREGQVADA-LALVDEVKGSCLEPDIVLYNVCIDCFGK 127
Query: 146 SGQIDTMEKCYEKFQSAGIQPS-----------------------------------INT 170
+G +D K + + ++ G++P
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+N ++ YG AG FE ++E +++ ++V++N ++ G+ + + LF +M+
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+ +P+ T ++ G+ E+ +L ++++ + + + N +VD + +
Sbjct: 248 KD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
E + E QRGC PD VTY +++ G K E L EKM
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGL---GKKGQVDEAYRLFEKM 350
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 36/160 (22%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++A+ + + M+ +G N ++ +LL A ++ ++A + MK C P
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-KCPP 602
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY-------------------- 101
+ TYSILI + ++K DM QG+ PN VTY
Sbjct: 603 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 662
Query: 102 ---------------NTLIDAYGRAKMFAEMELTLVKMLS 126
N LI+ A E T V LS
Sbjct: 663 ERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLS 702
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 38/368 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + +KA F MVD+G F +LL + RS F+KA+ +K + DV
Sbjct: 105 KSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER--VKFDV 162
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMFAEM 117
++ I+IK C + DK LL + G+ PN V Y TLID RA++F +
Sbjct: 163 YSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDK 222
Query: 118 --ELTLV---------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQ 148
E+ LV KM P+++T NC + + G+
Sbjct: 223 MGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGK 282
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I +++ + G++ ++ T+N L+ + + +++ M+K S ++TYN
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I F G+L + L ++S + PS VT L+ Y AG + + + R ++
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG 402
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHA 327
I V L+DAY RL+ + + M++ G PD Y ++ G MK +
Sbjct: 403 ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESS 462
Query: 328 KEFQDLVE 335
K F+ + E
Sbjct: 463 KLFRSMGE 470
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 6/342 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E+A F M + G AN +FT L++ + GL F L E MK
Sbjct: 206 GCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMK-INGLF 264
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ TY+ L+ + L +M +G+ N VTYNTLI R + E E
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKL 324
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M P++ T N + F + G +D ++ +S G+ PS+ T+NIL++ Y K
Sbjct: 325 VDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSK 384
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+++ ++ + M+ S + VT ++IDA+ R ++++ ++ M + P
Sbjct: 385 AGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYV 444
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ G ++ + R + + V +N ++ Y + +L M+
Sbjct: 445 YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+G P+ +Y +++ +G +E + L++KM E L
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDG---KWEEAEVLLDKMIELQL 543
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 134/312 (42%), Gaps = 1/312 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF+ M G N ++ L++ Y G +AF L + M+ + +V TY+ LI
Sbjct: 253 DLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRER-GVEANVVTYNTLIGG 311
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ + + L+ M + PN +TYNTLI + + L ++ S P
Sbjct: 312 MCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPS 371
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ T N + + +G + + + GI PS T +L+D+Y + EK +
Sbjct: 372 LVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYS 431
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K+ + Y ++I G++K+ LFR M ++PS V +++ Y
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKED 491
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ +LR ++ ++ + ++ ++ + + E + +L+ M + KP
Sbjct: 492 NSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551
Query: 313 TMVRAYSTNGMK 324
+ +A + +K
Sbjct: 552 MISKAKNFTELK 563
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 10/324 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT---YSILI 70
L Q ++D + QS + + S F SLL H+ T + P + T Y +I
Sbjct: 43 LLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHL--TQNQNPSMTTALLYESII 100
Query: 71 KSCLKAFAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ LK+ DK ++M +G+ RPN +N+L+ + R+ F + L L E
Sbjct: 101 NAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWL-FFNELKER 157
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ DV++ ++ +G +D + Q G+ P++ + L+D K G E+
Sbjct: 158 VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERAR 217
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + T+ ++I+ + G K LF M+ + P+ T L+ Y
Sbjct: 218 LFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + + + + + V +N L+ R + E + +++ M++ P+
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
+TY T++ + G + A D
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLD 361
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 9/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ +Q ++L MV +GC N ++ L+ +YGR+ ++A S+ + M+ CQ
Sbjct: 397 ILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEA-GCQ 455
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D + M + P+T TY+ +I+ G+A
Sbjct: 456 PDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKL 515
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + T + Y Q+AG QP T++I+++ G
Sbjct: 516 FCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGH 575
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH E+ A+ M++ ++ Y +++D +G+ G++++ ++ M + + P+ T
Sbjct: 576 CGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPT 635
Query: 241 LCSLVRAYGHAGKPEK----LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
SL+ A+ + L S+LR + T+ +C +A +M
Sbjct: 636 CNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSF----DMGFCG 691
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
E+M G +++H +F DL+ D
Sbjct: 692 ELMAVTGHPAHMFLLSMPAAGPDGQNVRDHVSKFLDLMHSEDR 734
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +TY+ ++ +A F + LL++M G +PN VTYN LI +YGRA E
Sbjct: 387 DGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 446
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C+PD T + +G +D Y+K Q A + P T++++++ GKA
Sbjct: 447 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 506
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
GH + M +VTYNI+I +A + L+R M++ +P VT
Sbjct: 507 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTY 566
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ GH G E+ ++ + + + D + LVD +G++ + + M
Sbjct: 567 SIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLN 626
Query: 302 RGCKPDKVTYRTMVRAY 318
G P+ T +++ A+
Sbjct: 627 AGLCPNVPTCNSLLSAF 643
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRA+ F + L +M+ + C+P+V T N + ++G + ++
Sbjct: 383 GFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEA 442
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+++ Q AG QP T+ L+D + KAG + + + MQ+ H S TY+++I+
Sbjct: 443 VSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINC 502
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M + P+ VT ++ A + R + N+ D
Sbjct: 503 LGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPD 562
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
V ++ +++ G E + + M+++ PD+ Y +V + G
Sbjct: 563 KVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVG 612
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 178 YGKAGHF-EKMSAVMEYMQKYHYSW------TIVTYNIVIDAFGRAGDLKQME------- 223
+G +GH E +S ++ + SW + N ++DA+ LKQ++
Sbjct: 319 FGSSGHVVENVSRILRQL-----SWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALG 373
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + L R K T ++V G A + + +L + + V +N L+ +Y
Sbjct: 374 FFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSY 433
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
GR E V + MQ+ GC+PD+VTY T++ ++ G + A + +KM E L+
Sbjct: 434 GRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALH---MYQKMQEAHLS 490
Query: 344 MKRPD 348
PD
Sbjct: 491 ---PD 492
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-Q 60
L + ++PE+A EL + M + G + FT L+ A R G A +L++ +K + C +
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS--CLE 246
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y++ I KA D ++ QG++P+ V+Y ++I +A E E
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M +E P + N + +G++G+ + K E+ + G PS+ +FN +L GK
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ ++ E M+K TYNI+ID G +++ + M + P+ +T
Sbjct: 367 KRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ +V A K E+ + D V + L+D G+ E + E M
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 485
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G + V Y +++R + +G K K F++L+ +
Sbjct: 486 DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 161/385 (41%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E A++L + + + GC + SF ++L+ G+ D+A SL E MK D +P+
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPN 387
Query: 63 VNTYSILIKS-CL----------------------------------KAFAFDKVQALLS 87
+TY+I+I CL KA ++ +
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML---------------------- 125
S +G P+ VTY +LID G+ E KML
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507
Query: 126 -SED------------CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
ED C+PD+ +N + +G+++ +E +S G P + +++
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
IL+ KAG + S + M++ ++ YN V+D F ++G + + + M+ +
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
++P+ T ++V + ++ + + I L+ V ++ L+D +G++ E
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
+LE M ++G P+ T+ +++ A
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDA 712
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 38/305 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-Q 60
L K Q + +F AM +G + +++ A++ + +SG KA+ +LE MK C Q
Sbjct: 573 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE--KCVQ 630
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY ++ K D+ L + ++GI N V Y++LID +G+ E L
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ + P+V+T N L A + +I+ C++ + P+ T++IL++ +
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ K + MQK +VTY +I + G++ LF ER K
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF-----ERFK----- 800
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ G P D FN L++ E V E +
Sbjct: 801 --------ANGGIP-----------------DAASFNALIEGMSNANRAMEAYQVFEETR 835
Query: 301 QRGCK 305
RGC+
Sbjct: 836 LRGCR 840
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 150/369 (40%), Gaps = 37/369 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTPD 58
LGK Q ++A+ LF+ M+D G +AN +T+L+ + GR K F L PD
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Query: 59 CQ-------------------------------PDVNTYSILIKSCLKAFAFDKVQALLS 87
PDV +YSILI KA + +
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M QG + YN ++D + ++ + L +M + +P V T +
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 647
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D +E+ +S GI+ ++ ++ L+D +GK G ++ ++E M K + + T+N
Sbjct: 648 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++DA +A ++ + F+ M+ + P+ T L+ K K + +
Sbjct: 708 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ + V + ++ ++ + + E + G PD ++ ++ S N A
Sbjct: 768 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN---ANRA 824
Query: 328 KEFQDLVEK 336
E + E+
Sbjct: 825 MEAYQVFEE 833
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 5/342 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + +A ELF M E ++ ++ YG +G F+ A+ LLE ++ C
Sbjct: 293 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER-GCI 351
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ ++ K D+ +L M PN+ TYN +ID E
Sbjct: 352 PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRI 410
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M P++ T+N + + +++ K +E G P T+ L+D GK
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + E M ++ V Y +I F G + +F+ + KP
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L + + AG+ EK + I + + D ++ L+ + E + M+
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
Q+G D Y +V + +G + A E ++E+M E C+
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYE---ILEEMKEKCV 629
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 149/362 (41%), Gaps = 42/362 (11%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
++ + M G Q+ L +A R+ D A + M+ +P + Y++LI
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRL-KFRPAFSAYTVLIG 187
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-E 130
+ +A ++ LL M G + TL+ A R A+ L LV + C E
Sbjct: 188 ALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD-ALALVDEVKGSCLE 246
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS----------------------- 167
PD+ N + FG +G +D K + + ++ G++P
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306
Query: 168 ------------INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+N ++ YG AG FE ++E +++ ++V++N ++ G+
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
+ + LF +M+ + +P+ T ++ G+ E+ +L ++++ + + +
Sbjct: 367 KRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
N +VD + + E + E QRGC PD VTY +++ G K E L E
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL---GKKGQVDEAYRLFE 482
Query: 336 KM 337
KM
Sbjct: 483 KM 484
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A+ LF+ +G + N +++L+ +G+ G D+A+ +LE M P
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK-GLTP 701
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ L+ + +KA ++ M PNT TY+ LI+ R + + + +
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + P+V T + G I +E+F++ G P +FN L++ A
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 821
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+ V E + I + ++DA ++ L+Q + ++R
Sbjct: 822 NRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLR 870
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 152/350 (43%), Gaps = 38/350 (10%)
Query: 18 MVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNTYSILIKSC 73
M D+G C N S+ +++ + G DKA++L M + P P++ TY+ +I
Sbjct: 128 MADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP---PNIVTYNSVIDGL 184
Query: 74 LKAFAFDKVQA----------------LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
KA A DK +A LL MS G++P+ VTY+ LID Y + E
Sbjct: 185 CKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEA 244
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
M+ PD +T L + G + M GI + FNIL+ +
Sbjct: 245 RNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRA 304
Query: 178 YGKAGHFEK-MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y K +K M+A +E QK +S +VTY VID +AG ++ F M SE + P
Sbjct: 305 YAKNETLDKAMTAFIEMRQK-GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+T SL+ G+ +K+ + + N I + +F N ++D+ + E
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
+ + G KPD V+Y ++ Y +G KMDE+ + R
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDG-------------KMDESIKLLGR 460
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 155/370 (41%), Gaps = 46/370 (12%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H+L M+ +G F L+ AY ++ DKA + M+ P+V TY+ +I
Sbjct: 280 HDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQK-GFSPNVVTYTTVID 338
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
KA + + S M ++G+ P+ +T+ +LI + ++E +M++ P
Sbjct: 339 ILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHP 398
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ +N + + G++ +++ G++P + ++ IL+D Y G ++ ++
Sbjct: 399 NAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLL 458
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M VTY+ +++ + + G + L+R M S+ +KP+ +T ++ HA
Sbjct: 459 GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHA 518
Query: 252 GKPEK-----------------------LGSVLR--FIDNS----------DIMLDTVFF 276
G+ LG + F+D + + L+ F
Sbjct: 519 GRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTF 578
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N ++ ++ + K + + G PD + Y M++++ G L+E+
Sbjct: 579 NIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG----------LLEE 628
Query: 337 MDETCLAMKR 346
DE L+M++
Sbjct: 629 SDELFLSMEK 638
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 120/256 (46%), Gaps = 6/256 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+ K+ EK L M++ G N ++ + + G +A + + + +P
Sbjct: 378 IGEWKKVEK---LSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV-GVKP 433
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV +Y+ILI CL D+ LL M + G+RP+ VTY+ L++ Y + +
Sbjct: 434 DVVSYTILIDGYCLDG-KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M S+D +P+ T N L ++G++ + Y K +GIQ INT+NI+L +
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCE 552
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ + + ++ + + T+NI+I + G + + LF + + P +
Sbjct: 553 NSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAII 612
Query: 241 LCSLVRAYGHAGKPEK 256
+++++ G E+
Sbjct: 613 YGLMIQSHIEEGLLEE 628
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 139/342 (40%), Gaps = 10/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + E A F MV EG + +FT+L+ G + K L M N
Sbjct: 339 ILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR-GIH 397
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ + ++ S K + + G++P+ V+Y LID Y E
Sbjct: 398 PNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKL 457
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+S PD T + L + +G++D Y + S ++P+ T+NI+L
Sbjct: 458 LGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFH 517
Query: 181 AGHFEKMSAVMEYMQKYHYSWT---IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
AG ++ A E+ K S I TYNIV+ + + +F+ +RS+ +
Sbjct: 518 AG---RVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLE 574
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T ++ G+ S+ I S ++ D + + ++ ++ E +
Sbjct: 575 VRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFL 634
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M++ GC + T +VR G A + + K+DE
Sbjct: 635 SMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTY---LTKIDE 673
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 133/324 (41%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E+A L + M G + +++ L+ Y + G +A ++ + M PD TY
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ-NPDAYTY 263
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+ A + LL+ M GI +N LI AY + + + ++M
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+V T + +G+++ + + S G+ P I TF L+ G ++K
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M + N ++D+ + G + + F + +KP V+ L+
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILID 443
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y GK ++ +L + + + D V ++ L++ Y + + + M + KP
Sbjct: 444 GYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKP 503
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
+ +TY ++ G A+EF
Sbjct: 504 NAITYNIILHGLFHAGRVVAAREF 527
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 150/339 (44%), Gaps = 39/339 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ + A + M G + + +LS + ++A L E M P
Sbjct: 19 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ-RINP 77
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY+ LI KA+ + L +M+ +G P V+YNTLID + + K +
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM+ +C P+V T + SG++ + + G+ P++ T++ L+D + K
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 197
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++E M + T+VTYNI++++ RA L+ LFR M R P+ VT
Sbjct: 198 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 257
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+RA H + +D RL +AEM
Sbjct: 258 NTLLRALCHHKQ--------------------------LDGAHRL--YAEMIA------- 282
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+GC PD +TY T+ + G K H E Q+L+EKM T
Sbjct: 283 KGCPPDAITYDTLAWGLTRAG-KVH--EAQELMEKMKLT 318
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY +++ K D A + +M+T+GI+P+ YN ++ + + E L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
KM+ + P+V T N + + +I+T + +++ G P+ ++N L+D + K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
V + M + + +VTY +ID ++G ++ + M + + P+ T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ + + ++ +L + I V +N L+++ R + + M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 301 QRGCKPDKVTYRTMVRA 317
QR C P VTY T++RA
Sbjct: 247 QRRCHPTVVTYNTLLRA 263
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T+ +++ K + A +E M YN V+ + +++ L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
F M +RI P+ VT +L+ A + E + + + + V +N L+D + +
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
K K V + M + C P+ VTY T++ S +G A E D
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 173
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 20/335 (5%)
Query: 3 GKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P++A ++FQ M + GC +S+ +LL+A S +D+A S + + T P
Sbjct: 89 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFE-TMGLSP 147
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ILIK + FDK + LL+ M QG P+ +Y TLI++ + ++
Sbjct: 148 NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLF 207
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK-FQSAGIQPSINTFNILLDSYGK 180
+M PDV N + F G I + +E+ + + P+I ++N++++ K
Sbjct: 208 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F++ + M+K + TY+ +I +G+L +++ M + P V
Sbjct: 268 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 327
Query: 241 LCSLVRAYGHAGKPE---KLGSVL-----RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+++ Y AG+ E +L V+ R + + +I++ +F N VD E
Sbjct: 328 YNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVD---------EA 378
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ E++ ++ C D +TY +V NG N A
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 146/308 (47%), Gaps = 4/308 (1%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
++ AY ++ + D+A + + M CQP + +Y+ L+ + +++ +D+ ++ T
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G+ PN TYN LI R K F + + L M + PDV++ + + +G +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW-TIVTYNIVID 211
K +++ G+ P + +NIL+D + K G S + E + K + I +YN++I+
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 212 AFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ G + E R+ ++ER + T +L+ +G + V + + + +
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D V +N +++ Y R E + +VM++ GC+ V+Y ++R N + A
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381
Query: 331 QDLVEKMD 338
+L+ + D
Sbjct: 382 WELLPEKD 389
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 4/333 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
KQ +KA EL M ++G + S+ L+++ ++G A L + M PDV
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER-GVTPDVAC 221
Query: 66 YSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ILI K + + + PN +YN +I+ + F E +M
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ D++T + + SG +D + Y++ G+ P + +N +L+ Y +AG
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ + + M+K T+V+YNI+I + + ++ L+ + +T L
Sbjct: 342 EECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V G K S+L +N LDT ++ +++ R E+ GVL+ M + GC
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460
Query: 305 KPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
KP+ ++ + + +++ + F ++V K
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N S+ +++ + G FD++F + MK Q D+ TYS LI + D +
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRV 312
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M+ G+ P+ V YNT+++ Y RA E L L K++ ++ V + N +R
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC-LELWKVMEKEGCRTVVSYNILIRGLFE 371
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ ++D +E T+ +L+ K G+ K +++E +
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA 431
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +I+ R G L ++ + M KP+ +++ + A K E LRF
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE---DALRFFG 488
Query: 266 N---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
N V +N L++ + + F+E +++ M +G KP+ +TY ++
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ M GC N A+++ + R+ + A +M + C P V TY+ LI
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV-SKGCFPTVVTYNTLINGL 509
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-VKMLSEDCEPD 132
KA F + AL+ +M +G +PN +TY+ L++ + K +M L L + L + +PD
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL-DMALNLWCQALEKGFKPD 568
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V N + +SG+++ + Y + + P++ T N L++ + K FE+ S + +
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWD 628
Query: 193 YMQKYHYSWT 202
++ + SW+
Sbjct: 629 HILQ---SWS 635
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 37/310 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL++ M EGC S+ L+ + D+A S+ E + DC D TY +
Sbjct: 342 EECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGV 399
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K +K ++L + +T Y+++I+ R E+ L +M
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P+ N + F + +++ + + S G P++ T+N L++ KA F +
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+++ M + ++TY+++++ + L L+ + KP ++
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+GK E DA L+ ++EMK QR C P+
Sbjct: 580 CSSGKVE-------------------------DA---LQLYSEMK-------QRKCVPNL 604
Query: 309 VTYRTMVRAY 318
VT+ T++ +
Sbjct: 605 VTHNTLMEGF 614
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK KA + + + D +T +++++++ R G D+ +L+ M C+
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH-GCK 461
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ + + +I ++A + +M ++G P VTYNTLI+ +A+ F+E
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +ML + +P++ T + + ++D + + G +P + NI++
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 581
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+G E + M++ +VT+N +++ F + D ++ ++
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 9 EKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++A L +AM E C N S+T L+ A L D+A LL M+ + + DV T
Sbjct: 94 DRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR-SAGVRADVVT 152
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y LI+ A DK L+ +M GI PN V Y++L+ Y ++ + ++ V+M
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ EPDV + + G+ + G++P++ T+N+L++ K G +
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERI-KPSCVTLCS 243
+ V++ M + + +VTYN +I ++ + +L ++R + I KP+ VT S
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ G+ + V ++ + M++ V +N L+ R+ + +++ M G
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 304 CKPDKVTYRTMVRAY 318
+PD TY +++ +
Sbjct: 393 LEPDSFTYSILIKGF 407
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 42/337 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KAH + MV G + N ++ L++ + G +A +L+ M P
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAP 288
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAY---GRAK---- 112
DV TY+ LIK D+ LL +M ++PN VT+N++I GR +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 113 MFAEMELT----------------------------LVKMLSEDCEPDVWTMNCTLRAFG 144
+ A ME T + +M S EPD +T + ++ F
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
Q+D E + GI+P + + LL + + G E+ + M ++ +V
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+ +I +AGDLK + L + + E + P VT ++ + +G E VL+ +
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S + D F+ L+ Y E+ VLE++++
Sbjct: 528 TASGFLPDVAVFDSLIQGY---STKGEINKVLELIRE 561
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 149/366 (40%), Gaps = 39/366 (10%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E ++F M ++G + + +T L+ + + G KA +++ M +
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR-GLE 252
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY++LI K + + +L MS +G+ P+ VTYNTLI E
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 121 LVKMLSED--CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+ +P+V T N ++ + G++ + + G ++ T+N+L+
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ K +M+ M TY+I+I F + + + E L MR I+P
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 239 -------VTLC---------------------------SLVRAYGHAGKPEKLGSVLRFI 264
V +C +++ AG + +L+ I
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ + D V ++ +++ + + GVL+ M G PD + ++++ YST G
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 325 NHAKEF 330
N E
Sbjct: 553 NKVLEL 558
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 18/320 (5%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTP--------DCQPDVN---TYSILIKSCLKAFAFDKV 82
L+ R G + A L H++ P D P V +Y+ ++ + + D+
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 83 QALLSDMSTQ---GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
ALL MS + RPN V+Y L+ A ++ + L M S DV T
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+R ++ ++D + + +GI+P++ ++ LL Y K+G +E + V M +
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+V Y +ID+ + G K+ + +M ++P+ VT L+ G ++
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG---CKPDKVTYRTMVR 316
VL+ + + D V +N L+ + E +LE M RG KP+ VT+ ++++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQ 335
Query: 317 AYSTNGMKNHAKEFQDLVEK 336
G A + + ++E+
Sbjct: 336 GLCDIGRMRQAFQVRAMMEE 355
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M ++ C +++T ++ A SG +A +L M+ C+P+++TY+++I +
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRER-GCEPNIHTYTVMINAM 119
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K ++ + +L +M +G+ P+ TYN LID Y + M + L M S C P+
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N + F + K + + PS+ T+N L+ K G+ + ++
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + TY++ ID + G +++ LF ++ + IK + V +L+ Y AGK
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+ S+L + D + ++ +N L+D + + E ++E M Q+G K TY
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 314 MVRAYSTNGMKNHAKEFQD 332
++ A G ++A D
Sbjct: 360 LIVAMLKEGDFDYAHRILD 378
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 1/305 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F M +GC N S+T L+ G D+ ++ + M+ DC P V TY++++
Sbjct: 23 AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIV 81
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ ++ + L S+M +G PN TY +I+A + E L +M+ +
Sbjct: 82 HALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLV 141
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V T N + + G ++ ++ + S P+ T+N L+ + + + + A+
Sbjct: 142 PSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMAL 201
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + + ++VTYN +I + G L L LM + P T +
Sbjct: 202 LSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCK 261
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ E+ + + I + V + L+D Y + + +L+ M C P+ T
Sbjct: 262 KGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSST 321
Query: 311 YRTMV 315
Y ++
Sbjct: 322 YNALI 326
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 9/341 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ E+ + MV++G + ++ AL+ Y + G+ + A +L+ M ++ C P+
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM-HSNSCNPN 178
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM-FAEMELTL 121
TY+ LI + + ALLS M + P+ VTYN+LI +G+ K+ + + L
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI--HGQCKIGYLDSAYRL 236
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +++E+ PD WT + + G+I+ + + GI+ + + L+D Y K
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + +++++ M TYN +ID + +++ L M + +K + T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ A G + +L + +S D + + A+ E + ++ +M
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+RG PD +TY ++ AY G+ N A F L D C
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPA--FDVLKRMFDTGC 455
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 146/364 (40%), Gaps = 35/364 (9%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K +A L M++ + ++ +L+ + G D A+ LL M N PD T
Sbjct: 193 KNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM-NENGVVPDQWT 251
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS+ I + K ++ L + + +GI+ N V Y LID Y +A + L +ML
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+EDC P+ T N + ++ E G++ ++ T+ IL+ + K G F+
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+++ M Y + Y I AF G++K+ E + +M + P +T ++
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 246 RAYGHAGKPEKLGSVL-RFIDNS-------------------------DIML----DTVF 275
AYG G VL R D ++ L VF
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
F + D + +K F + E M + GC P+ TY ++ G A Q L +
Sbjct: 492 FADVADVWKMMK-FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA---QKLFD 547
Query: 336 KMDE 339
M+E
Sbjct: 548 HMNE 551
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 147/342 (42%), Gaps = 23/342 (6%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A L ++M+ +G ++T L+ A + G FD A +L+ M ++ Q
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS-GYQ 386
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ I + + + ++S M +G+ P+ +TY +IDAYG +
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI-NTFNILLDSYG 179
L +M C+P T +C ++ E+ +K+++ + SI N F +
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHL-------LKEELTKKYKNVALCDSIPNVFFADVADVW 499
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS-- 237
K FE + E M ++ S I TY +I + G L + LF M + PS
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEA 559
Query: 238 ----CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ C + YG A + +G+++ + V F L + + K K
Sbjct: 560 IYNSLLNCCCELGIYGDAVR--LVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKA----K 613
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
V + Q G D+V ++ ++ NG+ + E ++E
Sbjct: 614 VVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVME 655
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 75/191 (39%), Gaps = 1/191 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
CD+ F A ++ + F+ A L E M C P++NTY+ LI K
Sbjct: 484 CDSIPNVFFADVADVWKMMKFETALELFEKMLEH-GCSPNINTYAKLIIGLCKVGRLGVA 542
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
Q L M+ +G+ P+ YN+L++ ++ + + M+ P + ++N
Sbjct: 543 QKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCG 602
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G + + + G + IL+D K G + S ++ M+
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIH 662
Query: 203 IVTYNIVIDAF 213
TY ++I+
Sbjct: 663 PQTYRMLIEGL 673
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 4/332 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQ---SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K+ E+A EL M D+G ++T ++T ++ ++ + D+A + +HM + +P+
Sbjct: 178 KRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID-KGVRPN 236
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+TY+ LI L + +V +L +MST G++P+ V Y L+D + E
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFD 296
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++ + +P V L + G + M + G+ P + FNI+ ++Y K
Sbjct: 297 SLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKA 356
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + M++ S +V Y +IDA + G + F M +E + P
Sbjct: 357 MIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFS 416
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
SLV K EK + + + I L+ FFN L+ R E + ++++M +
Sbjct: 417 SLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRV 476
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+PD ++Y T+V + G + A + D++
Sbjct: 477 DVRPDVISYNTLVDGHCLTGRIDEAAKLLDVM 508
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 13/323 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +FQ M+D+G N ++T L+ Y +G + + +L+ M +T QP
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEM-STHGLQP 270
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y++L+ K + + + + +GI+P+ Y L+ Y +EM L
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ PD N A+ ID ++K + + P + + L+D+ K
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390
Query: 182 GHFEKMSAVMEYMQKYHYSWT--IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC- 238
G + AV+++ Q + T I ++ ++ ++ E LF + + I+ +
Sbjct: 391 GRVD--DAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAA 448
Query: 239 ---VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ +C+L R G+ + ++ + D+ D + +N LVD + E +
Sbjct: 449 FFNILMCNLCR----EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKL 504
Query: 296 LEVMQQRGCKPDKVTYRTMVRAY 318
L+VM G KPD+ TY T++ Y
Sbjct: 505 LDVMVSIGLKPDEFTYNTLLHGY 527
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 1/276 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ + S+ L+ + +G D+A LL+ M + +PD TY+ L
Sbjct: 465 EAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI-GLKPDEFTYNTL 523
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA D +L +M +G+ P VTYNT++ + F E + + M++
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR 583
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ D++T L + +D K ++ S +Q I T NI++ + K G E
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + Y + TY ++ + + G L++++ LF M P+ L +LVR
Sbjct: 644 LFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
H G + G L +D + L+ + L+ Y R
Sbjct: 704 HRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A +F +++ +G + + LL Y G + S L+ M PD
Sbjct: 286 GRCTE---ARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRN-GVSPD 341
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ ++I+ + K D+ + M Q + P V Y LIDA + + L
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M++E PD++ + + + + EK + + GI+ + FNIL+ + + G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +++ M + +++YN ++D G + + L +M S +KP T
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y A + + S+ R + + V +N ++ ++ F E K + M
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
K D TY ++ N + A K FQ L K
Sbjct: 582 RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 134/335 (40%), Gaps = 4/335 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +F M + ++ AL+ A + G D A M N PD+ +S
Sbjct: 359 DEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMIN-EGVTPDIFVFSS 417
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ ++K + L ++ QGIR N +N L+ R E + + ML D
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV + N + +G+ID K + S G++P T+N LL Y KA +
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAY 537
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + +VTYN ++ + G + + L+ M + R K T ++
Sbjct: 538 SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGL 597
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++ + + + + D+ LD N ++ A + + + + G PD
Sbjct: 598 CRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
TYR + G +E +L M+E A
Sbjct: 658 ETYRLIAENLIKEG---SLEELDELFSAMEENGTA 689
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 138/331 (41%), Gaps = 4/331 (1%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M++EG + F++L+ ++KA L + + + + ++IL+ +
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD-QGIRLNAAFFNILMCNLC 458
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ + Q L+ M +RP+ ++YNTL+D + E L M+S +PD +
Sbjct: 459 REGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEF 518
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T N L + + +ID + + G+ P + T+N +L + G F + + M
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNM 578
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
I TY I+++ R + + +F+ + S+ ++ T+ ++ A G+
Sbjct: 579 INNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRK 638
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E + I ++ D + + + + E+ + M++ G P+ +
Sbjct: 639 EDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
VR G A + + K+DE +++
Sbjct: 699 VRWLLHRGDIGRAGVY---LSKLDEKNFSLE 726
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 48/308 (15%)
Query: 76 AFAFDKVQALLSDMSTQGIRPNTV-TYNTLIDAYGRAKMFAEMELTL-----------VK 123
+ D L +M T RP +V T+N L+ RA+ + EL + VK
Sbjct: 29 SLGLDDALKLFDEMLTYA-RPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVK 87
Query: 124 MLSEDCEPDV-------------------------WTMNCT------LRAFGNSGQID-T 151
+ C + W++N T L+ ++ ++D
Sbjct: 88 VAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA 147
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ---KYHYSWTIVTYNI 208
+ + G ++ ++NILL E+ +M M ++ +VTY
Sbjct: 148 TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTT 207
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
VID +A + + + +F+ M + ++P+ T L+ Y GK +++ +L+ +
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D V + L+D + E + + + + ++G KP Y ++ Y+T G +
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327
Query: 329 EFQDLVEK 336
F DL+ +
Sbjct: 328 SFLDLMVR 335
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA ++F+ +V G T + L++ Y + AF + E MK+ +
Sbjct: 343 GLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-HIR 401
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K K + L+ +M G+ P+ T+NTLIDAYG A +
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV 461
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + + DV + ++AF +G+I + + P+ +N ++D+Y +
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 521
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ ++E M+ S +IVTYN+++ R+ + + E L +R++ ++P V+
Sbjct: 522 SGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A + G +K +L+ ++ I + LV A +M+ + + M
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQML 641
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ +P Y MV AY
Sbjct: 642 HKNVEPSSSIYGIMVDAY 659
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 6/340 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L + + A ++F MVD G N ++ ++ + + G + F L + M + P +
Sbjct: 204 LWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--K 261
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY++L+ + D+ +AL+ +M++ + P+ TY+ L D R M
Sbjct: 262 PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSL 321
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ L + +T + L G++ ++ +E G+ P+ +N L++ Y +
Sbjct: 322 FAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQ 381
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E M+ H +TYN +I+ + + + E L M + PS T
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 441
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ AYG AG+ EK +VL + I D + F +V A+ + E +L+ M
Sbjct: 442 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ P+ Y +++ AY +G A LVEKM +
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALL---LVEKMKNS 538
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 36/357 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M+ +G N ++ LLS R+G D+ +L++ M + PD TYSI
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMA-SHSMLPDGFTYSI 304
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L ++ L FA K + + + G
Sbjct: 305 LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P TV YNTLI+ Y + + +M S PD T N + + E
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + +G+ PS+ TFN L+D+YG AG EK V+ MQ+ ++++ V+ AF
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ S++ AY +G E+ ++ + NS +
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V +N L+ R E + ++ ++ +G +PD V+Y T++ A G + A E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 1/271 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA +L M G D + ++F L+ AYG +G +K F++L M+ +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKS 472
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV ++ ++K+ K + A+L DM + + PN YN++IDAY + + L +
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + + T N L+ S QID E+ ++ G++P + ++N ++ +
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K +++ M KY T+ T + ++ A AG + ME L++ M + ++PS
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+V AY K+ S+ + + I D
Sbjct: 653 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 9/298 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S+ +++ RSG A + + M + P+ TY+ +I +K + L
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDM-GVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G +PN VTYN L+ R E + +M S PD +T + +G+
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
TM + + G+ T +ILL+ K G K V E + T V YN
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ + + DL+ +F M+S I+P +T +L+ K ++ ++ S
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 269 IMLDTVFFNCLVDAYGRL----KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ FN L+DAYG KCF VL MQQ+G K D +++ ++V+A+ NG
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFT----VLSDMQQKGIKSDVISFGSVVKAFCKNG 488
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 9/305 (2%)
Query: 38 GRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM--STQGIR 95
GR AF LL +PD ++ ++++C+ A D A+L M S
Sbjct: 136 GRHADVRAAFGLLV----AAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPP 191
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ +YN +I R+ ++ +M+ P+ T N + G ++ +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
++ G +P++ T+N+LL + G ++ A+M+ M + TY+I+ D R
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
G+ + M LF + + T L+ GK K V + ++ ++ TV
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+N L++ Y +++ + E M+ R +PD +TY ++ M A +DLV
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA---EDLVM 428
Query: 336 KMDET 340
+M+++
Sbjct: 429 EMEKS 433
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M +AN ++ ++ + + D A +L M+N +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVR 292
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TYS LI SCL + + LLSDM + I PN VT+N LIDA+ + E E
Sbjct: 293 PNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ +PD++T + + F ++D + +E S P++ T+N L++ +
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA ++ + M + VTY +I F +A D + +F+ M S+ + P+ +
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ GK EK V ++ S + +N +++ + + + +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KPD + Y TM+ + G+K A L KM E
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADA---LFRKMRE 568
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A LF M ++G N ++++L+S + A LL M P
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INP 328
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ LI + +K + + L +M + I P+ TY++LI+ + E +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQI-------------------------------- 149
M+S+DC P+V T N + F + +I
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 150 ---DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
D + +++ S G+ P+I T+N LLD K G EK V EY+Q+ TI TY
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
NI+I+ +AG ++ LF + + +KP + +++ + G E+ ++ R
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 1/317 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ A L MV+ G +T +FT L+ +A +L++ M CQP++ T
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVT 227
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y +++ K D LL+ M I N V Y+T+ID+ + + + +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ P+V T + + N + + I P++ TFN L+D++ K G
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + M K I TY+ +I+ F L + +++F LM S+ P+ VT +L+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ A + ++ + R + ++ +TV + L+ + + + + V + M G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 306 PDKVTYRTMVRAYSTNG 322
P+ +TY T++ NG
Sbjct: 468 PNIMTYNTLLDGLCKNG 484
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 138/330 (41%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F LLSA + FD SL E M+ ++ TY+I
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNI 125
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ALL M G P+ VT ++L++ Y K ++ + +M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T + + ++ G QP++ T+ ++++ K G +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+ +V Y+ VID+ + LF M ++ ++P+ +T SL+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + +L + I + V FN L+DA+ + E + + + M +R PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +++ + + + AK +L+ D
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 36/352 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K K+ + L + M G N ++ L++ + R A +LL M +P
Sbjct: 95 IAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL-GYEP 153
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ T S L+ AL+ M G RP+T+T+ TLI +E +
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ C+P++ T + G ID K ++A I+ ++ ++ ++DS K
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 182 GH-------FEKM----------------------------SAVMEYMQKYHYSWTIVTY 206
H F +M S ++ M + + +VT+
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +IDAF + G L + E L+ M I P T SL+ + + ++ + + +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
D + V +N L++ + + K E + M QRG + VTY T++ +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E+ + M +G + N ++TAL+ Y + D+AFSL E M + PDV T S
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS-GVLPDVVTLSA 297
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + F + AL +M G+ PN VTY TLID+ +A+ +E L +M+S
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D+ + G G+I+ + QS I P+ T+ +L+D++ +AG+ +
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAE 417
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M++ +VT++ +I+ + G L + R M+ I P+ VT +L+ +
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
E V R + + + + + LV+ + + + + M +RG D
Sbjct: 478 FKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDH 537
Query: 309 VTYRTMVRA-YSTNGMKNHAKEFQDLVEK 336
V Y T++ + T M K Q+L+EK
Sbjct: 538 VNYTTLMDGLFKTGNMPAAFKVGQELMEK 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 36/356 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M + G + + ++ +++A R G KA LL+ MK +P++ TY+ L
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN-SIKPNLITYTTL 648
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVT----------------------------- 100
+ L+A K + LL++M++ G P ++T
Sbjct: 649 VVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGL 708
Query: 101 ------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
YNTL+ M + L +ML+ PD T N + S +D
Sbjct: 709 HADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFA 768
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Y + G+ P+I TFN LL AG + V+ M+K +TY+I++ +
Sbjct: 769 IYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA 828
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ + + L+ M S+ P T SL+ + AG + + + ++ +
Sbjct: 829 KKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSS 888
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ L++ + +L+ E++ +L+ M++ G KP K T +M RA+S GM A+
Sbjct: 889 TYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRL 944
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 1/290 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ AL+ Y + A +++E M T DV Y+ L+ + D ++
Sbjct: 189 GWNALIDGYCKVQDMAAALAVVERM-TTQGVALDVVGYNSLVAGFFHSGDADAALEVVER 247
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ PN VTY LI Y + K E M+ PDV T++ + GQ
Sbjct: 248 MKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ 307
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + G+ P+ T+ L+DS KA + ++ M +V Y
Sbjct: 308 FSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTA 367
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++D G+ G +++ + + R +S+ I P+ VT LV A+ AG + VL ++
Sbjct: 368 LMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKS 427
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++ + V F+ +++ + C + + M+ G P+ VTY T++ +
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 5/308 (1%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A+T S+ L+A G A +L M V + L+ C + A
Sbjct: 113 ADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGE--AA 170
Query: 85 LLSDMSTQGIRPN---TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L++M +G + V +N LID Y + + A + +M ++ DV N +
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F +SG D + E+ ++ G++P++ T+ L+ Y K ++ ++ E M +
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+VT + ++D R G + LFR M + P+ VT C+L+ + A + + +L
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL 350
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + +++D V + L+D G+ E K VL Q P+ VTY +V A+
Sbjct: 351 GEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA 410
Query: 322 GMKNHAKE 329
G + A++
Sbjct: 411 GNIDGAEQ 418
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 145/336 (43%), Gaps = 7/336 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A ++ + + N ++T L+ A+ R+G D A +L M+ P
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK-SVIP 430
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+S +I +K K + M GI PN VTY TLID + + F E L
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK---FQGQEAAL 487
Query: 122 ---VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
ML E E + + ++ + +G I+ E ++ G+ + L+D
Sbjct: 488 DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G+ V + + + + S V YN+ I+ G + + + MR+ ++P
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T +++ A GK K +L+ + + I + + + LV + K +L
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNE 667
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
M G P +T++ +++A S + + E +L+
Sbjct: 668 MASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ Q ++++ + + ++ G F +A S L+ M+NT +PD TY+ +I
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT-GLEPDQATYNTMI 614
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + K LL +M I+PN +TY TL+ A + + + L +M S
Sbjct: 615 AARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFA 674
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P T L+A S + D + + +E AG+ I +N L+ G + V
Sbjct: 675 PTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVV 734
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M + +T+N +I ++ L ++ M + + P+ T +L+
Sbjct: 735 LDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLES 794
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ + +VL + + + + ++ LV Y + E + M +G P T
Sbjct: 795 AGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 854
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ ++ GM N AKE
Sbjct: 855 YNSLMSDFAKAGMMNQAKEL 874
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 146/335 (43%), Gaps = 6/335 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSIL 69
A + M G + + + L R+GL +A +L E + DV ++ L
Sbjct: 134 APPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNAL 193
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSED 128
I K A++ M+TQG+ + V YN+L+ + + A+ L +V +M ++
Sbjct: 194 IDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSG-DADAALEVVERMKADG 252
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V T + + +D YE +G+ P + T + L+D + G F +
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+ M K + VTY +ID+ +A + L M S + V +L+
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK E+ VLR + +I + V + LVDA+ R + VL M+++ P+
Sbjct: 373 GKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNV 432
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
VT+ +++ G A ++ + KM ++ +A
Sbjct: 433 VTFSSIINGLVKRGCLGKAADY---MRKMKDSGIA 464
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 154/363 (42%), Gaps = 21/363 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++ L MV G + +TAL+ G+ G ++A +L H + + + P
Sbjct: 337 LAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQ-SDNITP 395
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY++L+ + +A D + +L M + + PN VT++++I+ + + +
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455
Query: 122 VKMLSEDCEPDVWTMNCTLRAF----GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KM P+V T + F G +D Y G++ + + L++
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV----YRDMLHEGVEANNFVVDSLVNG 511
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G+ E A+ + M + V Y ++D + G++ + + + + + P
Sbjct: 512 LRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPD 571
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V + GK + S L+ + N+ + D +N ++ A R ++ +L+
Sbjct: 572 AVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLK 631
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV------------EKMDETCLAMK 345
M++ KP+ +TY T+V G+ AK + + +++ + C +
Sbjct: 632 EMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSR 691
Query: 346 RPD 348
RPD
Sbjct: 692 RPD 694
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 42/352 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L MV +GC + ++ +++ + G D AF+LL M+ +P V Y+ +I
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGL 61
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELTLVKMLSEDCE 130
K D L +M T+GIRPN VTY++LI YGR +++ L M+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLSDMIERKIN 118
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV+T + + AF G++ EK Y++ I PSI T++ L++ + ++ +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 191 MEYMQKYH-------YSWTI----------------------------VTYNIVIDAFGR 215
E+M H Y+ I VTYNI+I +
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
AGD + +F+ M S+ + P+ +T +L+ GK EK V ++ S +
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 298
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+N +++ + + + + +G KPD V Y TM+ + G K A
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 119
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+S LI + +K + + L +M + I P+ VTY++LI+ + E +
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+ C PDV T N ++ F +++ + + + G+ + T+NIL+ +A
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M I+TYN ++D + G L++ +F ++ +++P+ T
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ AGK E + + + D V +N ++ + R E + + M++
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ Y T++RA +G + + E
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAEL 388
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ MV D + ++++L++ + D+A + E M + C PDV TY+ L
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTL 197
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK K ++ + +MS +G+ NTVTYN LI +A + +M+S+
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L +G+++ +E Q + ++P+I T+NI+++ KAG E
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +V YN +I F R G ++ + LF+ M+ + P+ +L+RA
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377
Query: 250 HAGKPEKLGSVLR 262
G E +++
Sbjct: 378 RDGDREASAELIK 390
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
CQPD+ TY +++ K D LL+ M + P + YNT+ID + K
Sbjct: 12 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK------ 65
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+D +++ ++ GI+P++ T++ L+
Sbjct: 66 -----------------------------HMDDALNLFKEMETKGIRPNVVTYSSLISCL 96
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G + S ++ M + + + T++ +IDAF + G L + E L+ M I PS
Sbjct: 97 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 156
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT SL+ + + ++ + F+ + D V +N L+ + + K E V
Sbjct: 157 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 216
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
M QRG + VTY +++ G + A+E F+++V
Sbjct: 217 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F+ MV +G N ++ LL ++G +KA + E+++ + +P + TY+I+I
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMI 303
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L ++S +G++P+ V YNT+I + R E + +M +
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
P+ N +RA G + + ++ +S G +T ++
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 5/329 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA +FQ M+D+ C + +F LL RS +KA LL MK C PD Y+
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEM-GCVPDDAIYNA 82
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA F + L++M P VTY ++D +A+ + L +M +
Sbjct: 83 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+++T N + ++D +K E+ G P + T+N + K +++
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC---DRVD 199
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ + + +V+Y VI+ ++GDL + M + P VT SL+ +
Sbjct: 200 EARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ E+ +L + + V +N L+ A RL + + +L M++RG PD
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
V+Y + AK F +VE+
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVER 348
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L + Q EKA +L M + GC + + AL+S Y ++ F +AF L M KN C
Sbjct: 52 LCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN--HCL 109
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+ ++ KA LL +M +G PN TYN +++ + E +
Sbjct: 110 PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM 169
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M PDV T N ++ ++D K + + P + ++ +++ K
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 226
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + S ++++M + +VTY+ +ID F + G++++ L M +P+ V
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 241 LCSLVRA---YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ A GH GK E + L ++ D V +N +D + + + K V +
Sbjct: 287 YNSLLGALHRLGHIGKAEDM---LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 343
Query: 298 VMQQRGCKPDKVTYRTMV 315
M +RGC P+ +Y ++
Sbjct: 344 RMVERGCTPNASSYSMLI 361
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + ++A + M + S+T +++ +SG D A +L+HM N C P
Sbjct: 192 LCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNR-GCTP 247
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS LI K ++ LL M G RPN V YN+L+ A R + E L
Sbjct: 248 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 307
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN--------- 172
V+M PDV + N + + ++ + +++ G P+ ++++
Sbjct: 308 VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLY 367
Query: 173 -ILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+LLD K G F++ A+ + + + + YN+++D+ + +Q++ ++ +
Sbjct: 368 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR---RQIDKALQIHK 424
Query: 231 SERIKPSC--VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
K C VT LV + ++L + + + D V + LVDA +
Sbjct: 425 QMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 484
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDLVEK 336
A + E + GC PD VTY ++ M A F LVE+
Sbjct: 485 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 30/318 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ A +L M D+GC N ++ ++ D+A +LE M P
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA-VRGYFP 180
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ IK K D+ + L+ M + P+ V+Y T+I+ ++ L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C PDV T + + F G+++ + G +P++ +N LL + +
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
GH K ++ M++ ++ +V+YN ID +A +K+ + +F M P+ +
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQ 300
L+ DI+L TV + L GR F E + +V+
Sbjct: 358 SMLI---------------------VDILLYTVLLDGLCKG-GR---FDEACALFSKVLD 392
Query: 301 QRGCKPDKVTYRTMVRAY 318
++ C+PD Y M+ ++
Sbjct: 393 EKICEPDVFFYNVMLDSH 410
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 103/277 (37%), Gaps = 32/277 (11%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G N TYN L+ R + +M+ + C+PD +T LR S Q++
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + + G P +N L+ Y KA F + + M K H T+VTY ++D
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVT-------LCS--------------LVRAY--- 248
+A + L MR + P+ T LC VR Y
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 249 --------GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
K +++ +F+ + D V + +++ + +L+ M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
RGC PD VTY +++ + G A D + K+
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 158/330 (47%), Gaps = 10/330 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M+ + SF +++ + G +KA ++E MK +V TY+ LI
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK-VRGVSANVITYNTLIDGY 208
Query: 74 LKAFAFDKV---QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K K+ A+L +M GI PN VT+N LID + + K + +M + +
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T N + N+G+++ ++ ++ ++P+I T N LL+ + K ++ +
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M K + + TYNI+IDA+ + +++ L+R+M + + P T L+
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPD 307
G E +++ +D + D + +N L+D+ L EMK L ++ + +G KP
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDS---LCNKGEMKKALRLLDEMCRKGLKPS 445
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++TY TM+ Y G A + +EK+
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKV 475
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 154/352 (43%), Gaps = 41/352 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTP 57
G CK + KA ++ + M G AN ++ L+ Y G+ G KA ++L+ M+
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C P+ T++ILI K + ++M+ QG++PN VTYN+LI+ E
Sbjct: 232 IC-PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M++ +P++ T N L F + + + ++ GI P++ T+NIL+D+
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350
Query: 178 Y-----------------GKA------------------GHFEKMSAVMEYMQKYHYSWT 202
Y GK G E ++ M H
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
++TYNI+ID+ G++K+ L M + +KPS +T +++ Y G ++
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ + + +N L+ + + + G+L M ++G P+++TY +
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 4/230 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K ++A ELF M +G N ++ L+ AY + + AF+L M C PDV
Sbjct: 318 KNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC-PDV 376
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLV 122
+TY+ LI + + + L+S+M T+ ++ + +TYN LID+ + +M + L L
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL-LD 435
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + +P T N + + G + + + G ++ T+N+L+ + K
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME-YLFRLMRS 231
E + ++ M + +TY IV + G + +E +L+++ S
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAVS 545
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 44/267 (16%)
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNC 138
++ Q LLS +S N++ + L+ AY + + + K S+ + V + N
Sbjct: 76 EQTQILLS-VSGDSFCANSIIVDILVWAYAK-NLRTRLGFEAFKRASDYGLKLSVTSCNP 133
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ G+I ME Y++ I+P++ +FNI+++ K G K ++E M+
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 199 YSWTIVTYNIVIDAF---GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
S ++TYN +ID + G+ G + + + + + MR++ I P+ VT
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT--------------- 238
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
FN L+D + + K + V M ++G KP+ VTY +++
Sbjct: 239 --------------------FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCL 342
NG N A +D +M +CL
Sbjct: 279 NGLCNNGKVNEATALRD---QMVNSCL 302
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ L+S+ G +L E PDV +++++IK + K
Sbjct: 41 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 100
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M+ G P+TVT+N L+D R + L ++ + C P+V T +
Sbjct: 101 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 160
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G+++ Y ++GI P+ T+N+L++ YGK G V + M +
Sbjct: 161 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 220
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+VT++ +ID + R G L ++ M RI+P+ T ++ + + ++ +
Sbjct: 221 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGL 280
Query: 261 LRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L ++ DI +N ++D + E + + M+++GC+PDK TY ++ Y
Sbjct: 281 LNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYC 340
Query: 320 TNGMKNHAKE----FQDLVE 335
MK+ E F ++VE
Sbjct: 341 ---MKSRISEAIMFFHEMVE 357
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 133/334 (39%), Gaps = 38/334 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q +KA EL + M + GC +T + L+ R+ + +L ++ C
Sbjct: 91 GVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCM 150
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ +I KA + A+ +DM GI PNTVTYN LI+ YG+
Sbjct: 151 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 210
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M C PDV T + + + GQ+D + + IQP++ TF+I++ S K
Sbjct: 211 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 270
Query: 181 AGHF-EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
E + + E + + YN VID + G + + + + M + +P
Sbjct: 271 QNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKY 330
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ Y S I +FF+ +V+A
Sbjct: 331 TYTILIIGYCM---------------KSRISEAIMFFHEMVEA----------------- 358
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
GC PD +T + GM N L
Sbjct: 359 ---GCSPDSITVNCFISCLLKAGMPNEVDHVMRL 389
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMEL 119
PD S L+ SC A D LLS S G R YN L+ + GR ++ + L
Sbjct: 9 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 68
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ PDVW+ FN+++
Sbjct: 69 FERWIQDRVYSPDVWS-----------------------------------FNVVIKGVC 93
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSC 238
+ G +K ++E M ++ S VT+NI++D R ++ + E L RL R P+
Sbjct: 94 RVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNV 153
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT S++ Y AGK E +V + S IM +TV +N L++ YG++ V +
Sbjct: 154 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 213
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
M + C PD VT+ +++ Y G + A
Sbjct: 214 MTRLRCPPDVVTFSSLIDGYCRCGQLDDA 242
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 1/303 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+T ++ + R+G +A + + M C PDV TY+ L+ K + LL++M
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGF-GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G+ P+ T+ TLI Y R F +L + PDV T N + G +
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ ++ + I P+ T++IL+DS+ + G E ++ M K I TYN +
Sbjct: 454 AKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I + R+G++K+ + + MR + + P +T +L+ Y +V ++ +
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V +N +++ + + V + M G +PD+ TY +++ + T G A +
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQ 633
Query: 330 FQD 332
D
Sbjct: 634 LHD 636
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 9/348 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +KA E+F+ M + +SF L+ + R G +A + M++
Sbjct: 236 GLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY-VT 294
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV ++S LI + D A L +M G+ P+ V Y +I + RA +E
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PDV T N L ++ EK + + G+ P + TF L+ Y +
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+FE + + + + +VTYN +ID R GDL + L+ M + I P+ +T
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ ++ G+ E L + + + +N ++ Y R + + L+ M+
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Q PD +T+ T++ Y + A +++EK M RPD
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK------EMVRPD 576
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 154/348 (44%), Gaps = 13/348 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG---LFDKAFSLLEHMKNTPDCQ 60
+ ++P +A E F+ ++D + ALL+ R+G L +A+ L+ + D +
Sbjct: 99 QSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVL----SSDSE 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ T +I++ S K FD ++S+M + + P+ VT+N LIDA RA
Sbjct: 155 VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M + +P + T N L+ + D ++ + + P + +FNIL+ + +
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ + MQ + + +V+++ +I F R G++ R M+ + P V
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ + AG + V + + D V +N L++ + + + +L M+
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+RG PD T+ T++ Y G F++ ++ D RPD
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQG------NFENALQLFDTLLRQRLRPD 436
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 148/368 (40%), Gaps = 38/368 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + P A E ++ ++ + N + ++ +Y ++ FD A +++ M+ C
Sbjct: 131 VLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKR--CV 188
Query: 61 -PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV T+++LI + +A D AL+ M+ +G++P VTYN+++ + + F + +
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M PDV + N + F G++ K Y++ Q + P + +F+ L+ +
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFS 308
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM----------------- 222
+ G + A + M+ V Y +VI F RAG + +
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368
Query: 223 ------------------EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
E L M + P T +L+ Y G E + +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ D V +N L+D R A+ + + M R P+ +TY ++ ++ G
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488
Query: 325 NHAKEFQD 332
A F D
Sbjct: 489 EDAFGFLD 496
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 1/160 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E A MV +G N +++ +++ Y RSG K L+ M+ + PD+ T+
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD-NVFPDLITF 545
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ LI +K + + M + +RP+ VTYN +I+ + + M
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
EPD +T + +G + +++ G P
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C P+V Y+ +I K +
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTYN+++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T ++L+ S K G ++ V + M +
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +YNI+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 419
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 479
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 480 HGSLLKAKEL 489
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 43/365 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C N ++ ++ + + G +KA L + M + P PD+ T
Sbjct: 203 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDLVT 259
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
Y+ ++ + KA A DK +A L M + + PN TYN LI Y ++F EM
Sbjct: 260 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 319
Query: 119 --------LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQID 150
+TL ++ C+ PDV++ N L + G +
Sbjct: 320 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 379
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
M ++ GI P TFN+L+ +Y G +K + M+ + +VTY VI
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A R G + F M + + P L++ + G K ++ I N+ +
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD VFF+ +++ +L + + + ++ G PD V Y ++ Y G M+ +
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 330 FQDLV 334
F +V
Sbjct: 560 FDAMV 564
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 47 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAAS---R 103
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R N + N L++ + AK
Sbjct: 104 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAK 163
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P++
Sbjct: 164 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPNV 222
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + +VTYN V+ A +A + + E R
Sbjct: 223 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 282
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++R+ P+ T +L+ Y G+ ++ V + + I+ D V + L+ + YG+
Sbjct: 283 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 342
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 343 IK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 376
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 130/303 (42%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G + +F L+ AY G+ DKA + M++ +PDV TY +I +
Sbjct: 383 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAA 441
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ YN LI + + + + ++++ D
Sbjct: 442 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 501
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G++ + ++ + G+ P +N+L+D Y G EK V +
Sbjct: 502 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 561
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V Y +++ + + G + + LFR M IKPS + ++ AG
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I +D +N ++ + +CF E + + ++ K + +T
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 681
Query: 313 TMV 315
TM+
Sbjct: 682 TMI 684
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 152/373 (40%), Gaps = 43/373 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + MV++ N ++ L+ Y +G + +A + + M+ P
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILP 325
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T S+L+ S K + + + M+ +G P+ +YN +++ Y +M
Sbjct: 326 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 385
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + PD +T N ++A+ N G +D + + + G++P + T+ ++ + +
Sbjct: 386 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 445
Query: 182 GHFEKMSAVMEYMQ----------KYHYS----------------------------WTI 203
G KM ME KY Y+ I
Sbjct: 446 G---KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V ++ +I+ + G + + +F L + + P V L+ Y GK EK V
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ ++ I + V + LV+ Y ++ E + M QRG KP + Y ++ G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 324 KNHAK-EFQDLVE 335
AK +F ++ E
Sbjct: 623 TVPAKMKFHEMTE 635
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N D+ +S
Sbjct: 449 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSS 507
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P+ V YN L+D Y + M+S
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS ++I++D +AG
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + I TYNIV+ + + +LF+ +R+ +K + +TL +++
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+P+
Sbjct: 688 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747
Query: 309 VTYRTMVR 316
+VR
Sbjct: 748 RLLNHVVR 755
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 121/273 (44%), Gaps = 1/273 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F V+ G + + L+ Y G +KA + + M + +P+V Y L+
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVGYGTLV 579
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D+ +L +M +GI+P+T+ Y+ +ID A ++ +M
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T N LR + D +++ ++ ++ +I T N ++D + E+ +
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + ++VTY+I+I + G +++ E +F M++ +P+ L +VR
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + G+ L ID + L+ + LVD +
Sbjct: 760 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 792
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 35/252 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 554 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 613
Query: 54 --------KNTP-----------DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P D+ TY+I+++ K FD+ L ++ +
Sbjct: 614 IDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 673
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ N +T NT+ID + + E + + P V T + + G ++ E
Sbjct: 674 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 733
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P+ N ++ K + A + + + ++S +T +++D F
Sbjct: 734 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 793
Query: 215 RAGDLK-QMEYL 225
G + Q+ +L
Sbjct: 794 SKGTCREQIRFL 805
>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
viburnoides]
Length = 337
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 5/280 (1%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA S+ +K + PD+ Y+ +I KA F + ++L+ +M G+ PNT +Y+
Sbjct: 3 YSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYS 61
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TL+ Y K F E +M C D+ T N + +G G +K + +
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
GI+P++ ++N LL YG A F + + MQ+ + +VTYN ++ +G+ + ++
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L + M+S I+P+ +T +++ +G GK ++ + + + +S +D + F ++ A
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 241
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
Y R A K +L ++ +PD + T + + G
Sbjct: 242 YERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAG 277
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 131/270 (48%), Gaps = 10/270 (3%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ K ++ S + G P+ V YN +I+ +G+AK+F E + +M + P+ + +
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYST 62
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L + + + + + + + T NI++D YG+ G ++ + M+K
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+V+YN ++ +G A + +LFRLM+ + I+ + VT S++ YG + EK
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++++ + + I +++ ++ ++ +G++ + + ++ G + D++ ++TM+ AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY 242
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G+ HAK +KRPD
Sbjct: 243 ERAGLVAHAKRLLH----------ELKRPD 262
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++A +LF M G + N S+ LL YG + LF +A L M+ + + +
Sbjct: 103 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR-KNIEQN 161
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ ++ K +K L+ +M ++GI PN++TY+T+I +G+ +
Sbjct: 162 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 221
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ S E D + A+ +G + ++ + + P +IL AG
Sbjct: 222 KLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAG 277
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E+ + V + IDA G D+ E + L+ + + V +
Sbjct: 278 RIEEATYV---------------FRQAIDA-GEVKDITVFERMIHLLSKYKKYSNVVEVF 321
Query: 243 SLVRAYGH 250
+R G+
Sbjct: 322 DKMRGLGY 329
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 30 FTALLSAYGRSGLFDK-AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
F +L Y + GL +K A + K+ +C D Y+ +I C +A D++ + +
Sbjct: 663 FLDMLRTYQKCGLLEKLADTYYWIRKSQVEC--DEAMYNCIINCCGRAIPVDELSRIFDE 720
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M QG NTVT N L+D YG+A +F E + M + D+ + N + A+ SG
Sbjct: 721 MIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFI-MARKQGLADIISYNTIIAAYAKSGN 779
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+M + Q AG S +N +LD+YGKAG E+ ++V++ M++ + TYNI
Sbjct: 780 FHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNI 839
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ +GR G ++ + + ++ + P + +L++AYG A PE +++ +
Sbjct: 840 MINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKG 899
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
I D V + L+ A R + F E M+Q G
Sbjct: 900 ISPDRVTYANLIAALQRNENFLEAVKWSLWMRQTG 934
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 8/288 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ YS++++ +KA + ++L++M Q I P+ + ++ Y + + ++ T
Sbjct: 623 DMIAYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADT 682
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ E D NC + G + +D + + +++ G + T N+LLD YGK
Sbjct: 683 YYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGK 742
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG F + V +K + I++YN +I A+ ++G+ M Y ++M+ S
Sbjct: 743 AGLFNRAEKVFIMARKQGLA-DIISYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEA 801
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ AYG AG+ E+ SVL+ + + D +N +++ YGR ++ VL ++
Sbjct: 802 YNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELK 861
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
RG PD +Y T+++AY A+ +D V+ M E + PD
Sbjct: 862 DRGVVPDLYSYNTLIKAYGI------ARMPEDAVKLMQEMRIKGISPD 903
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+++ ++ Y ++ + A S+L M+ + PD + ++++ K +K+
Sbjct: 626 AYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYW 685
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ + + YN +I+ GRA E+ +M+ + + T+N L +G +G
Sbjct: 686 IRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGL 745
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ EK + + G+ I ++N ++ +Y K+G+F M+ ++ MQ + + YN
Sbjct: 746 FNRAEKVFIMARKQGL-ADIISYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNC 804
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++DA+G+AG L++ + + M+ + K T ++ YG G E + +VL + +
Sbjct: 805 MLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRG 864
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ D +N L+ AYG + + +++ M+ +G PD+VTY ++ A N
Sbjct: 865 VVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYANLIAALQRN 917
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ ++ +F M+ +G ANT + LL YG++GLF++A + + D
Sbjct: 706 GRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQG--LAD 763
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I + K+ F + + M G + YN ++DAYG+A E L
Sbjct: 764 IISYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQ 823
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
KM C+ D +T N + +G G I+ + + + G+ P + ++N L+ +YG A
Sbjct: 824 KMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIAR 883
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
E +M+ M+ S VTY +I A R
Sbjct: 884 MPEDAVKLMQEMRIKGISPDRVTYANLIAALQR 916
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 5/274 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSIL 69
A + F M++ N +F L+ Y ++G +A + M+N C VN YS +
Sbjct: 260 ATKWFHMMLEREVQPNLSTFGMLMVLYQKTGKLSEAEFTFQKMRNCNIKC---VNAYSAM 316
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + F K + ++ M+ G+ PN + ++ Y + E EL L M+ E
Sbjct: 317 ITLYTRLGLFAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEGF 376
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
++ N + +G S + + ++ SAG+ P T+ +++ +G+A +E+
Sbjct: 377 TLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAIL 436
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + + +I+ R D + + MR+ + S + + LVRAYG
Sbjct: 437 YYRKLKGAGFRPNASNFYTMINLLARRDDNETAAEIMEDMRAAGCQCSSI-VTVLVRAYG 495
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
G+ K+ +L+ N I+ D + LV ++
Sbjct: 496 AVGRMHKVLPILQACFNKKILFDATSCSILVTSF 529
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 139/326 (42%), Gaps = 13/326 (3%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
C+Q E+A + Q+MVDEG N ++ L++ YG+S KA + + + + PD
Sbjct: 356 CQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKANRVFDSL-GSAGLAPD 414
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY +++ +A +++ + G RPN + T+I+ R +
Sbjct: 415 ETTYRSMVEGFGRANIYEEAILYYRKLKGAGFRPNASNFYTMINLLARRDDNETAAEIME 474
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQ----IDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
M + C+ + +RA+G G+ + ++ C+ K I + +IL+ S+
Sbjct: 475 DMRAAGCQCSS-IVTVLVRAYGAVGRMHKVLPILQACFNK----KILFDATSCSILVTSF 529
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ E+ ++ + ++ Y+++I + G ++ M P+
Sbjct: 530 VQKSLLEEALYILREKKWKDSAFEDNLYHMLICSCKEGGSYNDAVRIYNQMPKSETHPNP 589
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-E 297
C+++ + + ++ + S +LD + ++ +V Y + + + +L E
Sbjct: 590 RISCTMIDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAE 649
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ +Q+ PDK + M+R Y G+
Sbjct: 650 MEKQKEIIPDKYLFLDMLRTYQKCGL 675
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/363 (15%), Positives = 138/363 (38%), Gaps = 38/363 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +KA+ +F ++ G + ++ +++ +GR+ ++++A +K +P+
Sbjct: 391 GKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKGA-GFRPN 449
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ + +I + + ++ DM G + +++ L+ AYG ++ L
Sbjct: 450 ASNFYTMINLLARRDDNETAAEIMEDMRAAGCQCSSIV-TVLVRAYGAVGRMHKVLPILQ 508
Query: 123 KMLSEDCEPDVWTMNCTLRAF-----------------------------------GNSG 147
++ D + + + +F G
Sbjct: 509 ACFNKKILFDATSCSILVTSFVQKSLLEEALYILREKKWKDSAFEDNLYHMLICSCKEGG 568
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + Y + + P+ ++D + F A+ ++ ++ Y+
Sbjct: 569 SYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFADAEAIYLELKASASVLDMIAYS 628
Query: 208 IVIDAFGRAGDLKQM-EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++ + +A L+ L + + + I P ++R Y G EKL +I
Sbjct: 629 VIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRK 688
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S + D +NC+++ GR E+ + + M Q+G + VT ++ Y G+ N
Sbjct: 689 SQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNR 748
Query: 327 AKE 329
A++
Sbjct: 749 AEK 751
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C P+V Y+ +I K +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTYN+++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T ++L+ S K G ++ V + M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +YNI+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 416
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 477 HGSLLKAKEL 486
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 43/365 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C N ++ ++ + + G +KA L + M + P PD+ T
Sbjct: 200 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDLVT 256
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
Y+ ++ + KA A DK +A L M + + PN TYN LI Y ++F EM
Sbjct: 257 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 119 --------LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQID 150
+TL ++ C+ PDV++ N L + G +
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
M ++ GI P TFN+L+ +Y G +K + M+ + +VTY VI
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A R G + F M + + P L++ + G K ++ I N+ +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD VFF+ +++ +L + + + ++ G PD V Y ++ Y G M+ +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 330 FQDLV 334
F +V
Sbjct: 557 FDAMV 561
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAAS---R 100
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R N + N L++ + AK
Sbjct: 101 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAK 160
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P++
Sbjct: 161 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPNV 219
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + +VTYN V+ A +A + + E R
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 279
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++R+ P+ T +L+ Y G+ ++ V + + I+ D V + L+ + YG+
Sbjct: 280 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 340 IK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 6/320 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ++F M +G + + S+ +L+ Y G L + M PD
Sbjct: 338 GKIKE---ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD-GIAPD 393
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
T+++LIK+ DK + ++M G++P+ VTY T+I A R KM ME
Sbjct: 394 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME-KF 452
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PD + NC ++ F G + ++ + + G+ I F+ ++++ K
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + V Y++++D + G +++ +F M S I+P+ V
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 572
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
C+LV Y G+ ++ S+ R + I T+ ++ ++D + K M +
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
G D TY ++R N
Sbjct: 633 SGIAMDICTYNIVLRGLFKN 652
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G + +F L+ AY G+ DKA + M++ +PDV TY +I +
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAA 438
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ YN LI + + + + ++++ D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G++ + ++ + G+ P +++L+D Y G EK V +
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V Y +++ + + G + + LFR M IKPS + ++ AG
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I +D +N ++ + +CF E + + ++ K + +T
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 313 TMV 315
TM+
Sbjct: 679 TMI 681
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 152/373 (40%), Gaps = 43/373 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + MV++ N ++ L+ Y +G + +A + + M+ P
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILP 322
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T S+L+ S K + + + M+ +G P+ +YN +++ Y +M
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + PD +T N ++A+ N G +D + + + G++P + T+ ++ + +
Sbjct: 383 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442
Query: 182 GHFEKMSAVMEYMQ----------KYHYS----------------------------WTI 203
G KM ME KY Y+ I
Sbjct: 443 G---KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V ++ +I+ + G + + +F L + + P V L+ Y GK EK V
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ ++ I + V + LV+ Y ++ E + M QRG KP + Y ++ G
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 324 KNHAK-EFQDLVE 335
AK +F ++ E
Sbjct: 620 TVPAKVKFHEMTE 632
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N D+ +S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSS 504
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P+ V Y+ L+D Y + M+S
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS ++I++D +AG
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + I TYNIV+ + + +LF+ +R+ +K + +TL +++
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+P+
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744
Query: 309 VTYRTMVR 316
+VR
Sbjct: 745 RLLNHVVR 752
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F V+ G + ++ L+ Y G +KA + + M + +P+V Y L+
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVVYCTLV 576
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D+ +L +M +GI+P+T+ Y+ +ID +A ++ +M
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T N LR + D +++ ++ ++ +I T N ++D + E+ +
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + ++VTY+I+I + G +++ E +F M++ +P+ L +VR
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + G+ L ID + L+ + LVD +
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 95/247 (38%), Gaps = 34/247 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 551 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610
Query: 54 --------KNTP-----------DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P D+ TY+I+++ K FD+ L ++ +
Sbjct: 611 IDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ N +T NT+ID + + E + + P V T + + G ++ E
Sbjct: 671 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 730
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P+ N ++ K + A + + + ++S +T +++D F
Sbjct: 731 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFS 790
Query: 215 RAGDLKQ 221
G ++
Sbjct: 791 SKGTCRE 797
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 2/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A LF M D + +T LL Y + G +KA L E MK C P V
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA-GCSPTV 303
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LIK KA ++ L +M T G+ P+ V N L++ G+ E+ +
Sbjct: 304 YTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNE 363
Query: 124 MLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C P V + N ++A F + + + ++K ++ G+ PS T++IL+D Y K
Sbjct: 364 MGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTN 423
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK ++E M + + Y +I+A G+A + LF+ ++ S
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ +G GK + + + N D +N L+ + E +L M++
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEEN 543
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE 329
GC D ++ ++ ++ G+ A E
Sbjct: 544 GCTADINSHNIILNGFARTGVPRRAIE 570
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 8/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML + Q EK HE++ M +EG C +T +++AL+S+Y + G D A L + MK+ +C
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD--NC 263
Query: 60 -QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QP Y+ L+ K +K L +M G P TY LI G+A E
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAY 323
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS- 177
ML++ PDV +N + G G+++ + + + + P++ ++N ++ +
Sbjct: 324 DLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKAL 383
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ ++S+ + M+ S + TY+I+ID + + +++ L M + P
Sbjct: 384 FESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
CSL+ A G A + E + + + + + + + ++ +G+ +E +
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M+ +G PD Y ++ GM N A L+ KM+E
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMVNEA---NSLLRKMEEN 543
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 151/324 (46%), Gaps = 43/324 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A++L++ M+ +G + L++ G+ G ++ ++ M T C P
Sbjct: 313 LGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEM-GTWRCTP 371
Query: 62 DVNTYSILIKSCLKAFA--------FDKVQA----------------------------L 85
V +Y+ +IK+ ++ A FDK++A L
Sbjct: 372 TVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED---CEPDVWTMNCTLRA 142
L +M +G P Y +LI+A G+AK + E L K L E+ V+ + ++
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRY-EAANELFKELKENFGNVSSRVYAV--MIKH 488
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
FG G++ + + ++ G P + +N L+ KAG + ++++ M++ +
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTAD 548
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
I ++NI+++ F R G ++ +F M+ IKP VT +L+ + HAG E+ ++R
Sbjct: 549 INSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMR 608
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRL 286
+ + D + ++ ++DA G +
Sbjct: 609 EMKDKGFEYDAITYSSILDAVGNM 632
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 39/311 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ A GR+ + KA S+ K C+P +TY+ +I ++ +KV + ++M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G DC PD T + + ++ G+
Sbjct: 224 CNEG----------------------------------DCFPDTITYSALISSYEKLGRN 249
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D+ + +++ + +QP+ + LL Y K G EK + E M++ S T+ TY +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I G+AG +++ L++ M ++ + P V L +L+ G G+ E+L +V +
Sbjct: 310 IKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRC 369
Query: 270 MLDTVFFNCLVDAYGRLKC-FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V +N ++ A K +E+ + M+ G P + TY ++ Y N +
Sbjct: 370 TPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKT---NRVE 426
Query: 329 EFQDLVEKMDE 339
+ L+E+MDE
Sbjct: 427 KALLLLEEMDE 437
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 20/335 (5%)
Query: 3 GKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K P++A ++FQ M + GC +S+ +LL+A S +D+A S + + T P
Sbjct: 64 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFE-TMGLSP 122
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TY+ILIK + FDK + LL+ M QG P+ +Y TLI++ + ++
Sbjct: 123 NLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLF 182
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK-FQSAGIQPSINTFNILLDSYGK 180
+M PDV N + F G I + +E+ + + P+I ++N++++ K
Sbjct: 183 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 242
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F++ + M+K + TY+ +I +G+L +++ M + P V
Sbjct: 243 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 302
Query: 241 LCSLVRAYGHAGKPE---KLGSVL-----RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+++ Y AG+ E +L V+ R + + +I++ +F N VD E
Sbjct: 303 YNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVD---------EA 353
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ E++ ++ C D +TY +V NG N A
Sbjct: 354 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 388
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 153/338 (45%), Gaps = 13/338 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G P H + + + D A+ AY ++ + D+A + + M CQP
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAH---------AYAKNSMPDQALDIFQRMHEIFGCQPG 88
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ L+ + +++ +D+ ++ T G+ PN TYN LI R K F + + L
Sbjct: 89 IRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 148
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + PDV++ + + +G + K +++ G+ P + +NIL+D + K G
Sbjct: 149 WMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 208
Query: 183 HFEKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVT 240
S + E + K + I +YN++I+ + G + E R+ ++ER + T
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYT 267
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ +G + V + + + + D V +N +++ Y R E + +VM+
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ GC+ V+Y ++R N + A +L+ + D
Sbjct: 328 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 364
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
KQ +KA EL M +G + S+ L+++ ++G A L + M PDV
Sbjct: 138 KQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER-GVTPDVAC 196
Query: 66 YSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ILI K + + + PN +YN +I+ + F E +M
Sbjct: 197 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 256
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ D++T + + SG +D + Y++ G+ P + +N +L+ Y +AG
Sbjct: 257 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 316
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ + + M+K T+V+YNI+I + + ++ L+ + +T L
Sbjct: 317 EECLELWKVMEK-EGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 375
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V G K S+L +N LDT ++ +++ R E+ GVL+ M + GC
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 435
Query: 305 KPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
KP+ ++ + + +++ + F ++V K
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 137/309 (44%), Gaps = 2/309 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL++ M EGC S+ L+ + D+A S+ E + DC D TY +
Sbjct: 317 EECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGV 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K +K ++L + +T Y+++I+ R E+ L +M
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P+ + N + F + +++ + + S G P++ T+N L++ KA F +
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
A+++ M + + ++TY+++++ + L L+ + KP ++
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+GK E + + + + + V N L++ + +++ F + + + Q G +PD
Sbjct: 555 CSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDI 614
Query: 309 VTYRTMVRA 317
++Y ++
Sbjct: 615 ISYNITLKG 623
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ- 60
L K ++ +A+ L + M+ +G N +++ L++ + D A +L CQ
Sbjct: 484 LSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW--------CQA 535
Query: 61 ------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
PDV ++I+I + + L S+M + PN VT+NTL++ + + + F
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+L +PD+ + N TL+ + +I G+ P+ T+NIL
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 655
Query: 175 LDSY 178
+ Y
Sbjct: 656 VQGY 659
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +L+ M C N + L+ + + F++A + +H+ QPD+ +Y+I
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY-GLQPDIISYNI 619
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
+K L+D +G+ P +T+N L+ Y K + E
Sbjct: 620 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 1/309 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F MV G + ++F L++ Y G + A +LE M + + PD TY+ ++
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ K V+ LL DM G+ PN VTYN L+ Y + E + M +
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL 307
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N + N+G I + + +S +QP + T+N L+D + G + +
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYG 249
ME M+ VT+NI + + +++ + L+ P VT +L++AY
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++R + I ++T+ N ++DA + + E +L+ +RG D+V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487
Query: 310 TYRTMVRAY 318
TY T++ Y
Sbjct: 488 TYGTLIMGY 496
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK---AFAFDKVQALL 86
F LSAY +G A + + M +P++ T + L+ ++ +F+ + +
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSIASAREVF 192
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGN 145
DM G+ + T+N L++ Y + L +M+SE + PD T N L+A
Sbjct: 193 DDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSK 252
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G++ ++ + G+ P+ T+N L+ Y K G ++ ++E M++ + + T
Sbjct: 253 KGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCT 312
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YNI+I+ AG +++ L +M+S +++P VT +L+ G + ++ ++
Sbjct: 313 YNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQME 372
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEM-KGVLEVMQQRGCKPDKVTYRTMVRAY 318
N + + V N + + + E+ + V E+++ G PD VTY T+++AY
Sbjct: 373 NDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 45/358 (12%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+L M G N ++ L+ Y + G +AF ++E MK T + PD+ TY+ILI
Sbjct: 261 DLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT-NILPDLCTYNILING 319
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID-------AYGRAKMFAEME------- 118
A + + L+ M + ++P+ VTYNTLID + K+ +ME
Sbjct: 320 VCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPN 379
Query: 119 -----LTL---------------VKMLSE--DCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
++L VK L E PD+ T + ++A+ G + +
Sbjct: 380 QVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ GI+ + T N +LD+ K ++ +++ K Y VTY +I + R
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFRE 499
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
+++ ++ M+ +I P+ T SL+ H GK E + S ++ D F
Sbjct: 500 EKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTF 559
Query: 277 NCLVDAY---GRL-KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
N ++ Y GR+ K F + + KPD T ++ GM A F
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESI----KHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 14/342 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L + M ++G N + L + ++ ++ + PD+ TY L
Sbjct: 363 EAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTL 422
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK+ LK ++ +M +GI+ NT+T NT++DA + + E L
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGY 482
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T + + +++ + +++ + I P++ TFN L+ G H K
Sbjct: 483 IVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLI---GGLCHHGKTEL 539
Query: 190 VMEYMQKYHYSWTI---VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
ME + S + T+N +I + + G +++ + KP T L+
Sbjct: 540 AMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 247 AYGHAGKPEKLGSVLRFIDN--SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
G EK L F + ++ +DTV +N ++ A+ + K E +L M+++
Sbjct: 600 GLCKEGMTEK---ALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRL 656
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
+PD+ TY +++ + +G + A E L++K +MKR
Sbjct: 657 EPDRFTYNSIITSLMEDGKLSEADE---LLKKFSGKFGSMKR 695
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA---FGNSGQIDTM 152
P+ ++ + AY A KM+ +P++ T N L + +S I +
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVID 211
+ ++ G+ + TFN+L++ Y G E ++E M +++ + VTYN ++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A + G L ++ L M+ + P+ VT +LV Y G ++ ++ + ++I+
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
D +N L++ E +++VM+ +PD VTY T++ G+ AK+
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368
Query: 332 DLVE 335
+ +E
Sbjct: 369 EQME 372
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLL-EHMKNTPDCQPDVNT 65
+ E A E F + + G + +F +++ Y + G +KAF E +K++ +PD T
Sbjct: 536 KTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS--FKPDNYT 593
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+IL+ K +K + + T+ +TVTYNT+I A+ + K E L +M
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+ EPD +T N + + G++ ++ +KF
Sbjct: 653 EKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 47/266 (17%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++AH L + G + ++ L+ Y R +KAF + + MK
Sbjct: 461 LCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKR------ 514
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEM- 117
IK I P T+N+LI +G+ ++ E
Sbjct: 515 --------IK----------------------ITPTVTTFNSLIGGLCHHGKTELAMEKF 544
Query: 118 -ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
EL +L +DC T N + + G+++ + Y + +P T NILL+
Sbjct: 545 DELAESGLLPDDC-----TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K G EK + T VTYN +I AF + LK+ L M +R++P
Sbjct: 600 GLCKEGMTEKALNFFNTLITEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEP 658
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLR 262
T S++ + GK + +L+
Sbjct: 659 DRFTYNSIITSLMEDGKLSEADELLK 684
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C P+V Y+ +I K +
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTYN+++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T ++L+ S K G ++ V + M +
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +YNI+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 429
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 489
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 490 HGSLLKAKEL 499
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 43/365 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C N ++ ++ + + G +KA L + M + P PD+ T
Sbjct: 213 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDLVT 269
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME 118
Y+ ++ + KA A DK +A L M + + PN TYN LI Y ++F EM
Sbjct: 270 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 329
Query: 119 --------LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQID 150
+TL ++ C+ PDV++ N L + G +
Sbjct: 330 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 389
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
M ++ GI P TFN+L+ +Y G +K + M+ + +VTY VI
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 449
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A R G + F M + + P L++ + G K ++ I N+ +
Sbjct: 450 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD VFF+ +++ +L + + + ++ G PD V Y ++ Y G M+ +
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 330 FQDLV 334
F +V
Sbjct: 570 FDAMV 574
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 57 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAAS---R 113
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R N + N L++ + AK
Sbjct: 114 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAK 173
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P++
Sbjct: 174 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPNV 232
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + +VTYN V+ A +A + + E R
Sbjct: 233 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 292
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++R+ P+ T +L+ Y G+ ++ V + + I+ D V + L+ + YG+
Sbjct: 293 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 352
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 353 IK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 386
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 6/320 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ++F M +G + + S+ +L+ Y G L + M PD
Sbjct: 351 GKIKE---ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD-GIAPD 406
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
T+++LIK+ DK + ++M G++P+ VTY T+I A R KM ME
Sbjct: 407 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME-KF 465
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PD + NC ++ F G + ++ + + G+ I F+ ++++ K
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 525
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + V Y++++D + G +++ +F M S I+P+ V
Sbjct: 526 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 585
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
C+LV Y G+ ++ S+ R + I T+ ++ ++D + K M +
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
G D TY ++R N
Sbjct: 646 SGIAMDICTYNIVLRGLFKN 665
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G + +F L+ AY G+ DKA + M++ +PDV TY +I +
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAA 451
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ YN LI + + + + ++++ D
Sbjct: 452 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 511
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G++ + ++ + G+ P +++L+D Y G EK V +
Sbjct: 512 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 571
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V Y +++ + + G + + LFR M IKPS + ++ AG
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I +D +N ++ + +CF E + + ++ K + +T
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 691
Query: 313 TMV 315
TM+
Sbjct: 692 TMI 694
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 152/373 (40%), Gaps = 43/373 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + MV++ N ++ L+ Y +G + +A + + M+ P
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILP 335
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T S+L+ S K + + + M+ +G P+ +YN +++ Y +M
Sbjct: 336 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 395
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML + PD +T N ++A+ N G +D + + + G++P + T+ ++ + +
Sbjct: 396 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 455
Query: 182 GHFEKMSAVMEYMQ----------KYHYS----------------------------WTI 203
G KM ME KY Y+ I
Sbjct: 456 G---KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V ++ +I+ + G + + +F L + + P V L+ Y GK EK V
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ ++ I + V + LV+ Y ++ E + M QRG KP + Y ++ G
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 324 KNHAK-EFQDLVE 335
AK +F ++ E
Sbjct: 633 TVPAKMKFHEMTE 645
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 129/308 (41%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N D+ +S
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSS 517
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P+ V Y+ L+D Y + M+S
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS ++I++D +AG
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + I TYNIV+ + + +LF+ +R+ +K + +TL +++
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ + V ++ ++ + E + + MQ GC+P+
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757
Query: 309 VTYRTMVR 316
+VR
Sbjct: 758 RLLNHVVR 765
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F V+ G + ++ L+ Y G +KA + + M + +P+V Y L+
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVVYCTLV 589
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D+ +L +M +GI+P+T+ Y+ +ID +A ++ +M
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T N LR + D +++ ++ ++ +I T N ++D + E+ +
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + +VTY+I+I + G +++ E +F M++ +P+ L +VR
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + G+ L ID + L+ + LVD +
Sbjct: 770 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 35/252 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 564 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 623
Query: 54 --------KNTP-----------DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P D+ TY+I+++ K FD+ L ++ +
Sbjct: 624 IDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 683
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ N +T NT+ID + + E + + P+V T + + G ++ E
Sbjct: 684 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAED 743
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P+ N ++ K + A + + + ++S +T +++D F
Sbjct: 744 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 803
Query: 215 RAGDLK-QMEYL 225
G + Q+ +L
Sbjct: 804 SKGTCREQIRFL 815
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 5/331 (1%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+L + MV GC N +F+ L+ R+GLF++ + M C PDV Y+ +I
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH-GCAPDVRMYATIID 295
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K + + +L+ M + G+ PN V YNTL+ A + E E L +M +DC
Sbjct: 296 GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL 355
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N + +G +D + + E+ G P + T+ +++ + K G ++ ++
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M V+Y IV+ A E L M + P+ VT +L+
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G E+ +L+ + + D + ++ ++D G+ E +L VM ++G P+ + Y
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIY 535
Query: 312 RTMVRAYSTNGMKNHA----KEFQDLVEKMD 338
++ A S G N + QD + D
Sbjct: 536 SSIASALSGEGRINKVIQMFENIQDTTVRSD 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 3/330 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A + M G N + LL + +++A LL M + DC
Sbjct: 296 GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK-DCP 354
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V +L M G P+ +TY T+I+ + + + E +
Sbjct: 355 LDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 414
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + C P+ + L+ ++ + E+ + G P+ TFN L++ K
Sbjct: 415 LRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 474
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M S +++Y+ VID G+AG+ + L +M + + P+ +
Sbjct: 475 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTII 534
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ K+ + I ++ + D V +N ++ + + L M
Sbjct: 535 YSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMV 594
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC P++ TY ++R ++ G A+E
Sbjct: 595 SSGCVPNESTYTILIRGLASEGFVKEAQEI 624
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 134/309 (43%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC + + +L A G D+A LL + + C+PDV +Y+ +++ A +
Sbjct: 176 GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGH 235
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
VQ L+ +M G PN VT++TLI R +F + +M C PDV +
Sbjct: 236 VQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID 295
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+++ + S G+ P++ +N LL A +E+ ++ M
Sbjct: 296 GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL 355
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
VT+NI++D + G + ++ + M P +T +++ + G ++ +L
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
R + +TV + ++ + + + + ++ M Q+GC P+ VT+ T++
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475
Query: 322 GMKNHAKEF 330
G+ A E
Sbjct: 476 GLVEQAIEL 484
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 105/305 (34%), Gaps = 71/305 (23%)
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP---------------------- 131
+ PN TY L+ A A+ L M C P
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 132 -------------DVWTMNCTLRAFGNSGQIDTMEKCYEK-FQSAGIQPSINTFNILLDS 177
DV N L+A + G +D + S G +P + ++N +L
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 178 YGKA---GH--------------------------------FEKMSAVMEYMQKYHYSWT 202
A GH FE++ V M ++ +
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+ Y +ID + L+ + M S + P+ V +L++ A + E+ +L
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + D LD V FN LVD + + VLE M + GC PD +TY T++ + G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406
Query: 323 MKNHA 327
+ + A
Sbjct: 407 LIDEA 411
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 150/339 (44%), Gaps = 39/339 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ + A + M G + + +LS + ++A L E M P
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ-RINP 182
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY+ LI KA+ + L +M+ +G P V+YNTLID + + K +
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM+ +C P+V T + SG++ + + G+ P++ T++ L+D + K
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++E M + T+VTYNI++++ RA L+ LFR M R P+ VT
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+RA H + +D RL +AEM
Sbjct: 363 NTLLRALCHHKQ--------------------------LDGAHRL--YAEMIA------- 387
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+GC PD +TY T+ + G K H E Q+L+EKM T
Sbjct: 388 KGCPPDAITYDTLAWGLTRAG-KVH--EAQELMEKMKLT 423
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 2/316 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
K + E+ E++Q MV+ G + L+S + G FD+A+ LL M+ +
Sbjct: 20 FAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR-LKRFKR 78
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
YS +I K ++ + L+ M+ P+ +TY +++ + K + T+
Sbjct: 79 KAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATV 137
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +PD + N L +++ +EK I P++ T+N L++ KA
Sbjct: 138 EEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKA 197
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E + + M Y T V+YN +ID F + DL + +F M P+ VT
Sbjct: 198 WRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTY 257
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ +GK + VL + + + ++CL+D + +++ E +LE M
Sbjct: 258 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317
Query: 302 RGCKPDKVTYRTMVRA 317
+G P VTY ++ +
Sbjct: 318 QGIAPTVVTYNILLNS 333
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 36/267 (13%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ILI K FD+ LL M + + + Y+T+I+ + E L++ +
Sbjct: 48 YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAR-ELIEKM 106
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PD T + + +ID E+ + GI+P D++
Sbjct: 107 ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKP---------DAF------- 150
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
YN V+ + +++ LF M +RI P+ VT +L+
Sbjct: 151 -------------------IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A + E + + + + V +N L+D + + K K V + M + C
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQD 332
P+ VTY T++ S +G A E D
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLD 278
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 1/308 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
FT LLSA + G + A L PD+ T SILI D ++ S M
Sbjct: 97 FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G++P+ VT+NTLI+ + FA+ + C+P V+T + G+
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
++K + AG QP++ T+NIL+DS K + + YM+ S I TYN +
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I K+ L M S I P+ T LV A GK + V + + +
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V ++ L+ Y E + + + M +GCKPD +Y +++ Y + AK+
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 330 -FQDLVEK 336
F +++ +
Sbjct: 397 LFNEMIHQ 404
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 3/329 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A LF+ M + GC N ++ L+ + + L ++A + +MK
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK-AKRIS 267
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI+ + + ALL++M++ I PN T+N L+DA + +E +
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M EPDV T + + + +I K ++ + G +P ++NIL+ Y K
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCK 387
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A ++ + M + V YN +I + G L++ + LF+ M S P T
Sbjct: 388 AKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ + G K + R + ++ + D +N L+DA + + + + +
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELF 507
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+G P+ Y T++ G+ + A E
Sbjct: 508 VQGLLPNVQIYTTIINNLCKEGLLDEALE 536
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 1/312 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F M+ G + +F L++ + G F +A + + + CQP V TY+ +I
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS-GCQPTVYTYTTII 207
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K L M G +PN VTYN LID+ + K+ E M ++
Sbjct: 208 NGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRIS 267
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD++T N ++ N + + S I P+I TFN+L+D+ K G + V
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + +VTY+ ++ + ++ + LF M ++ KP + L++ Y
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCK 387
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + ++ + + + + D V +N L+ +L E + + + M G PD T
Sbjct: 388 AKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447
Query: 311 YRTMVRAYSTNG 322
Y ++ + G
Sbjct: 448 YSMLLDGFCKEG 459
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 4/334 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +A E F GC ++T +++ + G A L + M+ CQ
Sbjct: 174 GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA-GCQ 232
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI S K ++ + S M + I P+ TYN+LI + + E
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M S + P+++T N + A G++ + ++ G++P + T++ L+ Y
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL 352
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M +YNI+I + +A + + + LF M + + P V
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN 412
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ G+ + + + + ++ + D ++ L+D + + + + VMQ
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472
Query: 301 QRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
KPD Y ++ A G +K+ K F +L
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 36/313 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ ++A L M N +F L+ A + G +A + + M +PDV T
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM-GVEPDVVT 342
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS L+ + + L M T+G +P+ +YN LI Y +AK E + +M+
Sbjct: 343 YSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PD N + G++ + ++ S G P + T+++LLD + K G+
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + MQ + I YNI+IDA + G+LK LF + + + P+ +++
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G +LD L+ F M+G GC
Sbjct: 523 NNLCKEG-----------------LLDEA-----------LEAFRNMEG-------DGCP 547
Query: 306 PDKVTYRTMVRAY 318
PD+ +Y ++R +
Sbjct: 548 PDEFSYNVIIRGF 560
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 8/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML + Q EK HE++ M +EG C +T +++AL+S+Y + G D A L + MK+ +C
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD--NC 263
Query: 60 -QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QP Y+ L+ K +K L +M G P TY LI G+A E
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS- 177
ML + PDV +N + G G+++ + + + P++ ++N ++ +
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ H ++S+ + M+ S + TY+I+ID + + +++ L M + P
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
CSL+ A G A + E + + + + + + + ++ +G+ +E +
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M+ +G PD Y ++ GM N A L+ KM+E
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEA---NSLLRKMEEN 543
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 2/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A LF M D + +T LL Y + G +KA L E MK C P V
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA-GCSPTV 303
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LIK KA D+ DM G+ P+ V N L++ G+ E+ +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSE 363
Query: 124 MLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C P V + N ++A F + + + ++K ++ + PS T++IL+D Y K
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK ++E M + + Y +I+A G+A + LF+ ++ S
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ +G GK + + + N D +N L+ + E +L M++
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE 329
GC+ D ++ ++ ++ G+ A E
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIE 570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 143/354 (40%), Gaps = 72/354 (20%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD-- 58
K + EKA +LF+ M GC ++T L+ G++G D+A+ + M TPD
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFA-FDKVQALLSD 88
C P V +Y+ +IK+ ++ A +V +
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL-------- 140
M + P+ TY+ LID Y + E L L++ + E P C+L
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNR-VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 141 ----------------------------RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ FG G++ + + ++ G P + +N
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+ KAG + ++++ M++ I ++NI+++ F R G ++ +F ++
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
IKP VT +L+ + HAG E+ ++R + + D + ++ ++DA G +
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDC 59
G CK + EKA L + M ++G ++ +L++A G++ ++ A L + +K N +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
V Y+++IK K + L ++M QG P+ YN L+ +A M E
Sbjct: 478 SSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM C D+ + N L F +G + +E + +GI+P T+N LL +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
AG FE+ + +M M+ + + +TY+ ++DA G
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 39/311 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ A GR+ + KA S+ K C+P +TY+ +I ++ +KV + ++M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G DC PD T + + ++ G+
Sbjct: 224 CNEG----------------------------------DCFPDTITYSALISSYEKLGRN 249
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D+ + +++ + +QP+ + LL Y K G EK + E M++ S T+ TY +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I G+AG + + ++ M + + P V L +L+ G G+ E+L +V +
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 270 MLDTVFFNCLVDAYGRLKC-FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V +N ++ A K +E+ + M+ P + TY ++ Y N +
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT---NRVE 426
Query: 329 EFQDLVEKMDE 339
+ L+E+MDE
Sbjct: 427 KALLLLEEMDE 437
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 34/364 (9%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ K E+++ M +G + + LL A +SG+ D+A+ + E MK C+PD
Sbjct: 198 RSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQK-YCEPDA 256
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI+ +A K + +M ++G N + YNTLI+A G+ KM ++ L K
Sbjct: 257 YTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSK 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE-----------------KFQSAGIQP 166
M+ C+P+ +T + TL GQ+ + + + +S +
Sbjct: 317 MIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHVSE 376
Query: 167 SINTFNILLDSY--GKAGHFEKMSAV-------------MEYMQKYHYSWTIVTYNIVID 211
+ N F + +SY G F M V + M + + + YN+V
Sbjct: 377 AHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFS 436
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
A G+ + + LF M++ I P T ++ +YG G +K + ++ S
Sbjct: 437 ALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKP 496
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS-TNGMKNHAKEF 330
D + +N L++ G+ E + + MQ++G PD TY ++ + +N + F
Sbjct: 497 DVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLF 556
Query: 331 QDLV 334
D++
Sbjct: 557 LDMI 560
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 149/351 (42%), Gaps = 39/351 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ + K F MV +GC N ++ L+ A G++ + DK +L M CQ
Sbjct: 265 MSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEG-GCQ 323
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-- 118
P+ TYSI + K ++ +L D+ + + N Y+ L+ + ++ +E
Sbjct: 324 PNQFTYSITLDILAKEGQLHRLNEVL-DICDRYM--NKSIYSYLVKSLSKSGHVSEAHNV 380
Query: 119 --------------------------------LTLVKMLSED-CEPDVWTMNCTLRAFGN 145
+ L+ M+ E DV N A G
Sbjct: 381 FCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGK 440
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
Q+ + ++K ++ GI P + T+NI++ SYG+ G +K S + E M ++T
Sbjct: 441 LKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVIT 500
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I+ G+ GDL + LF+ M+ + P T L+ +G + K + ++ +
Sbjct: 501 YNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMI 560
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ + V +N L+D R AE E M+Q+G PD +T + R
Sbjct: 561 AEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILER 611
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 28/260 (10%)
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
S G R + +YN ++ R + L +V + D G SG I
Sbjct: 110 SFPGFRHDAFSYNRILALLFRTRADPSEALRIVSEMERD---------------GVSGNI 154
Query: 150 DTME-------------KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
T+ KC E G++ + T+ +L ++ ++ K V E M++
Sbjct: 155 STVNLLVGIGGGGVEVTKCLELAMKWGLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRR 214
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
Y I YN+++DA ++G + Q +F M+ + +P T L+R G AGK K
Sbjct: 215 KGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASK 274
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
S + + L+ + +N L++A G+ K ++ VL M + GC+P++ TY +
Sbjct: 275 FLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLD 334
Query: 317 AYSTNGMKNHAKEFQDLVEK 336
+ G + E D+ ++
Sbjct: 335 ILAKEGQLHRLNEVLDICDR 354
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 126/302 (41%), Gaps = 33/302 (10%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY ++++ L++ K + +M +G + YN L+DA ++ M + M
Sbjct: 188 TYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDM 247
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ CEPD +T +R G +G+ +++ S G ++ +N L+++ GK
Sbjct: 248 KQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMV 307
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM----------------EYLFR- 227
+K+ V+ M + TY+I +D + G L ++ YL +
Sbjct: 308 DKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKS 367
Query: 228 LMRSERIKPSCVTLCSLVRAYG---------------HAGKPEKLGSVLRFIDNSDIMLD 272
L +S + + C + +Y ++GK + +L + + D
Sbjct: 368 LSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATD 427
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQ 331
+N + A G+LK + + + + M+ G PD TY M+ +Y G+ + A F+
Sbjct: 428 VGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFE 487
Query: 332 DL 333
D+
Sbjct: 488 DM 489
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 152/311 (48%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ Q M + G + ++ L+ YG +G D++ LL+ M + +P++ TY++
Sbjct: 159 EDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNM 218
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI++ K + ++ M+ G++P+ VT+NT+ AY + A+ E +++M
Sbjct: 219 LIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNS 278
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T + + G++ + + + G+QP++ N L++ + + +
Sbjct: 279 LKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVD 338
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V++ M+++ ++TY+ +++A+ +AG L++ + ++ M +KP L + Y
Sbjct: 339 EVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGY 398
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
A + EK +L + S + + V F ++ + + V + M + G P+
Sbjct: 399 VRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNL 458
Query: 309 VTYRTMVRAYS 319
T+ T++ Y+
Sbjct: 459 KTFETLIWGYA 469
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 3/308 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F AL++A+ SG + A +++ MK + +P TY+ LIK A D+ LL M
Sbjct: 145 FNALINAFAESGNMEDAKKVVQKMKES-GLKPSACTYNTLIKGYGIAGKPDESMKLLDLM 203
Query: 90 STQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
ST+G ++PN TYN LI A + + +E + KM + +PDV T N A+ +G+
Sbjct: 204 STEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGK 263
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
E + Q ++P+ T I++ Y + G ++ + M+ ++ N
Sbjct: 264 TAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNS 323
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+++ F D ++ + +LM +I+P +T +++ A+ AG EK + + S
Sbjct: 324 LVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSG 383
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHA 327
+ D ++ L Y R + + + +L VM + G P+ V + T++ + + G M N
Sbjct: 384 VKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAM 443
Query: 328 KEFQDLVE 335
+ F + E
Sbjct: 444 RVFDKMGE 451
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 155/320 (48%), Gaps = 4/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K +P++A +FQ +++ G + ++T LL+A F S++ ++ +
Sbjct: 81 ILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEK-QMK 139
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMEL 119
PD ++ LI + ++ + + ++ M G++P+ TYNTLI YG A K M+L
Sbjct: 140 PDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKL 199
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + +P++ T N +RA I K ++G+QP + TFN + +Y
Sbjct: 200 LDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYA 259
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSC 238
+ G + A++ MQ+ T I+I + R G +++ + +++R M+ ++P+
Sbjct: 260 QNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYR-MKDLGMQPNL 318
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ L SLV + + + VL+ ++ I D + ++ +++A+ + + K +
Sbjct: 319 IVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNN 378
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
M + G KPD Y + + Y
Sbjct: 379 MLKSGVKPDAHAYSILAKGY 398
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 149/330 (45%), Gaps = 8/330 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G +P+++ +L M EG N +++ L+ A + +A++++ M QP
Sbjct: 188 GIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKM-TASGMQP 246
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T++ + + + + +A++ +M ++PN T +I Y R E +
Sbjct: 247 DVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFV 306
Query: 122 VKMLSEDCEPDVWTMNCTLRAFG---NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M +P++ +N + F + +D + K E+FQ I+P + T++ +++++
Sbjct: 307 YRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQ---IRPDVITYSTIMNAW 363
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG EK + M K Y+I+ + RA ++++ E + +M + P+
Sbjct: 364 SQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNV 423
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
V +++ + G+ + V + + + F L+ Y K + +G+L++
Sbjct: 424 VIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQI 483
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
M++ +P K T + A+ G K AK
Sbjct: 484 MEEFHVQPKKSTILLVAEAWRFAGFKERAK 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M N ++ T ++S Y R G +A + MK+ QP++ + L
Sbjct: 266 QAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDL-GMQPNLIVLNSL 324
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + D V +L M IRP+ +TY+T+++A+ +A + + ML
Sbjct: 325 VNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGV 384
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD + + + + +++ E+ +G+ P++ F ++ + G +
Sbjct: 385 KPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMR 444
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V + M ++ S + T+ +I + A + E + ++M ++P T+ + A+
Sbjct: 445 VFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWR 504
Query: 250 HAGKPEKLGSVLRFI 264
AG E+ ++LR +
Sbjct: 505 FAGFKERAKTLLRTV 519
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 112/236 (47%), Gaps = 11/236 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAY----GRSGLFDKAFSLLEHMKNT 56
G C++ ++A M D G N +L++ + R G+ D+ L+E +
Sbjct: 292 GYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGV-DEVLKLMEEFQ-- 348
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
+PDV TYS ++ + +A +K + + ++M G++P+ Y+ L Y RA+ +
Sbjct: 349 --IRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEK 406
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
E L M P+V + + + G++D + ++K G+ P++ TF L+
Sbjct: 407 AEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIW 466
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
Y +A K +++ M+++H T +V +A+ AG ++ + L R ++++
Sbjct: 467 GYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLLRTVKAK 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%)
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
V++ ++G ++ +F+ + +PS T +L+ A + + S++ ++
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D++FFN L++A+ + K V++ M++ G KP TY T+++ Y G + +
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESM 197
Query: 329 EFQDLV 334
+ DL+
Sbjct: 198 KLLDLM 203
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 39/345 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA ++ M+ G + +F LL A + DKA+ + E MK C+PD TY+I
Sbjct: 205 DKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRR-HCEPDTFTYTI 263
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I+ KA D+ AL M +G N + YNT+I+A + +M + L KM+
Sbjct: 264 MIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENG 323
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSI----------------- 168
C+P+ +T + L GQ++ ++ E K+ + I
Sbjct: 324 CQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLF 383
Query: 169 -NTFNI-----------LLDSYGKAGHFEKMSAVMEYMQKYH---YSWTIVTYNIVIDAF 213
N +N+ +L+S +G K++ ++ + ++H + + YN V A
Sbjct: 384 CNMWNVHDKGDKDAYMSMLESLCSSG---KIAEAIDLLNRFHEKCITTDTIMYNTVFTAL 440
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
GR + + L+ M+ + P T L+ +YG AG+ + + ++NS+ D
Sbjct: 441 GRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDV 500
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ +N L++ G+ E + MQ++G PD VTY T++ +
Sbjct: 501 ISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECF 545
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA LF MV+ GC N +++ LL+ G +K +++E K + Q
Sbjct: 303 LAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQ- 361
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ +++ K + L +M + + Y +++++ + AE + L
Sbjct: 362 ---IYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAE-AIDL 417
Query: 122 VKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ E C D N A G Q+ + YEK + G P I T+NIL+ SYG+
Sbjct: 418 LNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGR 477
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + E ++ + +++YN +I+ G+ GD+ + F+ M+ + + P VT
Sbjct: 478 AGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVT 537
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ +G K E S+ + + V +N L+D R AE + ++
Sbjct: 538 YSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLK 597
Query: 301 QRGCKPDKVTYRTMVRAYS 319
Q+G PD +TY + R S
Sbjct: 598 QQGLTPDSITYAVLERLQS 616
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 147/348 (42%), Gaps = 10/348 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + +++ LFQAM+++G N ++ ++ A + + DKA L M CQ
Sbjct: 267 MTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVEN-GCQ 325
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TYS+L+ + +K+ ++ +MS + + N Y + + +E
Sbjct: 326 PNEFTYSVLLNVLVAEGQLNKLDNIV-EMSKKYM--NKQIYAYFVRTLSKLGHSSEAHRL 382
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + + D L + +SG+I +F I +N + + G+
Sbjct: 383 FCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGR 442
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + E M++ I TYNI+I ++GRAG + +F + + +P ++
Sbjct: 443 LKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVIS 502
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ G G ++ + + + D V ++ L++ +G+ + + M
Sbjct: 503 YNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMI 562
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
GC P+ VTY ++ +G E DL K+ + L PD
Sbjct: 563 AEGCSPNLVTYNILLDCLERSG---RTAEAVDLYAKLKQQGLT---PD 604
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 136/361 (37%), Gaps = 46/361 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ L M G + + L+ +G D+ L++ + + +Y
Sbjct: 141 EQTESLLDDMEKRGVKGSISTVNILIGFFGD---LDRCVGLVKKW----GLRFNAYSYKC 193
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L++ L+ DK + DM G + +N L+DA + + + M
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRH 253
Query: 129 CEPDVWTMNCTLRAFGNSGQIDT--------MEK-------------------------- 154
CEPD +T +R G +G+ D +EK
Sbjct: 254 CEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAV 313
Query: 155 -CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ K G QP+ T+++LL+ G K+ ++E +KY Y +
Sbjct: 314 LLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKY---MNKQIYAYFVRTL 370
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + LF M + K S++ + +GK + +L I DT
Sbjct: 371 SKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDT 430
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQD 332
+ +N + A GRLK + + + E M+Q G PD TY ++ +Y G + A K F++
Sbjct: 431 IMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEE 490
Query: 333 L 333
L
Sbjct: 491 L 491
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 94 IRPNTVTYNTLIDAYGRAK---MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
++ + YN L R+ F + E L M + + T+N + FG+
Sbjct: 117 LKNDPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGD----- 171
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+++C + G++ + ++ LL Y + +K V M + YS I +N+++
Sbjct: 172 -LDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLL 230
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
DA + + + +F M+ +P T ++R G AGK ++ ++ + +
Sbjct: 231 DALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFT 290
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L+ + +N +++A + + + + M + GC+P++ TY ++ G N
Sbjct: 291 LNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNI 350
Query: 331 QDLVEK 336
++ +K
Sbjct: 351 VEMSKK 356
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 118/293 (40%), Gaps = 35/293 (11%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYG--------------RAKMFAEMELTLVKM 124
F++ ++LL DM +G++ + T N LI +G R ++ L +
Sbjct: 140 FEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYL 199
Query: 125 LSEDCEP---------------DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
DC+ D++ N L A ++D K +E + +P
Sbjct: 200 RLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTF 259
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
T+ I++ GKAG ++ A+ + M + ++ ++ YN +I+A + + LF M
Sbjct: 260 TYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKM 319
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+P+ T L+ G+ KL ++ ++ S ++ + V +L
Sbjct: 320 VENGCQPNEFTYSVLLNVLVAEGQLNKLDNI---VEMSKKYMNKQIYAYFVRTLSKLGHS 376
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+E + M K DK Y +M+ + ++G E DL+ + E C+
Sbjct: 377 SEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSG---KIAEAIDLLNRFHEKCI 426
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 10/325 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K P +F++M NTQ++ L+S+ G +A +MK C P
Sbjct: 58 LIRLKCPRVVPMIFESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKKY--CDP 115
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ LI K + LL +M +G+RPN +N ++DA+ R+ ++
Sbjct: 116 DEFTYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALF 175
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ +C PD + + AF SG+ID +++ + P + +N L++ GKA
Sbjct: 176 ERMVEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKA 235
Query: 182 GHFEKMSAVMEYMQKY----HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K A +E K +Y +VTYN++ID G+ G + + ++ MR +P
Sbjct: 236 N---KAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLH-FQPD 291
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+ +L+ G AG+ + SVL + + D + + LV+ Y R LE
Sbjct: 292 IFSYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLE 351
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNG 322
M+ G P +V + G
Sbjct: 352 EMKSSGFSPTPSALEVLVNSLLKAG 376
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC E EL + M+ G N F ++ A+ RSG ++ +L E M +C+PD
Sbjct: 129 KCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEH-ECRPDP 187
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLV 122
+Y +L+++ + D+ + + P+ YNTL++ G+A K A +E+
Sbjct: 188 KSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKANKAHAALEIFYK 247
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ +PD+ T N + G G+ID CY+K + QP I ++N LL G+AG
Sbjct: 248 IKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMR-LHFQPDIFSYNTLLGRLGRAG 306
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++V++ M + +TY I+++ + RAG+L M+S P+ L
Sbjct: 307 RVDLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSSGFSPTPSALE 366
Query: 243 SLVRAYGHAGK 253
LV + AG+
Sbjct: 367 VLVNSLLKAGR 377
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ LL Y + + + A M+ + + +P ++ Y ++ ++ V +
Sbjct: 15 TYRILLRIYVDASMVEDALETFHKMEFS-EIKPTLDDYHYIMFKLIRLKCPRVVPMIFES 73
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +RPNT TYN LI + AE M + C+PD +T + F
Sbjct: 74 MRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYM-KKYCDPDEFTYAALINGFCKCMD 132
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ + E+ + G++P++ FN+++D++ ++G E++ A+ E M ++ +Y +
Sbjct: 133 TEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECRPDPKSYRV 192
Query: 209 VIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI-DN 266
+++AF +G + + ++ R SE P +L+ G A K + I D
Sbjct: 193 LVEAFAVSGRIDEAFGFVQRYADSEN-APHLGAYNTLMNRLGKANKAHAALEIFYKIKDR 251
Query: 267 SDIMLDTVFFNCLVDAYGRL-------KCFAEMK-------------------------- 293
+ D V +N L+D G++ C+ +M+
Sbjct: 252 PNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPDIFSYNTLLGRLGRAGRVDLF 311
Query: 294 -GVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
VL+ M + G + D++TY +V Y+ G
Sbjct: 312 ASVLDDMSRDGVQQDRITYAILVEGYARAG 341
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEH---------------- 52
E+ LF+ MV+ C + +S+ L+ A+ SG D+AF ++
Sbjct: 169 EQVIALFERMVEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTL 228
Query: 53 -------------------MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
+K+ P+ +PD+ TY++LI K D+ + M
Sbjct: 229 MNRLGKANKAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLH- 287
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+P+ +YNTL+ GRA L M + + D T + + +G +D
Sbjct: 288 FQPDIFSYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVAL 347
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
E+ +S+G P+ + +L++S KAG F AV++ M
Sbjct: 348 AYLEEMKSSGFSPTPSALEVLVNSLLKAGRFGAAEAVVQEM 388
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T LR + ++ ++ + + K + + I+P+++ ++ ++ + + + E M
Sbjct: 15 TYRILLRIYVDASMVEDALETFHKMEFSEIKPTLDDYHYIMFKLIRLKCPRVVPMIFESM 74
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+K TYN +I + G + + + F M+ + P T +L+ +
Sbjct: 75 RKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMK-KYCDPDEFTYAALINGFCKCMDT 133
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E +L + + + FN ++DA+ R ++ + E M + C+PD +YR +
Sbjct: 134 EVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECRPDPKSYRVL 193
Query: 315 VRAYSTNGMKNHAKEF 330
V A++ +G + A F
Sbjct: 194 VEAFAVSGRIDEAFGF 209
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S+ LL GR+G D S+L+ M Q D TY+IL++ +A D A L +
Sbjct: 294 SYNTLLGRLGRAGRVDLFASVLDDMSRD-GVQQDRITYAILVEGYARAGNLDVALAYLEE 352
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
M + G P L+++ +A F E + +M + + P + TL A
Sbjct: 353 MKSSGFSPTPSALEVLVNSLLKAGRFGAAEAVVQEMAAINGGPGKKIVTGTLAA 406
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 1 MLGKCKQPEKAHELFQAMVDE----GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT 56
+LG+ + + +LF +++D+ G + ++ L+ Y R+G D A + LE MK++
Sbjct: 298 LLGRLGRAGRV-DLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSS 356
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMST 91
P + +L+ S LKA F +A++ +M+
Sbjct: 357 -GFSPTPSALEVLVNSLLKAGRFGAAEAVVQEMAA 390
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 3/318 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +KA E+F+AM + +SF L+ + R G ++A + M+
Sbjct: 236 GLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR-GVT 294
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV ++S LI D A L +M G+ P+ V Y +I + RA +E
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C PDV T N L ++ E+ + + G+ P + TF L+ Y +
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+FEK + + + +V YN +ID R GDL + L+ M + I P+ VT
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ ++ G+ E+ L + + + + + +N ++ Y R + + L+ M
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Query: 301 QRGCKPDKVTYRTMVRAY 318
Q PD +T+ T++ Y
Sbjct: 535 QDNILPDLITFNTLIHGY 552
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 149/363 (41%), Gaps = 34/363 (9%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD-- 58
+ + E+A + ++ M G + SF+ L+ + G D A + L MK PD
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
C PDV TY+ L+ K + LL++M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G+ P+ T+ TLI Y R F + +L + PDV N + G +
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ ++ + I P+ T++IL+DS+ + G E+ ++ M I+TYN +
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I + R+G++K+ + + M + I P +T +L+ Y +V ++ +
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V +N +++ + E V + M G +PD+ TY +++ + T G A +
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633
Query: 330 FQD 332
D
Sbjct: 634 LHD 636
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 3/256 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ A EL M + G + +FT L+ Y R G F+KA L + + + +
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ-RLR 434
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ LI + K L DM + I PN VTY+ LID++ E
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+S+ P++ T N ++ + SG + ++ +K I P + TFN L+ Y K
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ V M+K VTYN++I+ F G++++ +F+ M + I+P T
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYT 614
Query: 241 LCSLVRAYGHAGKPEK 256
SL+ + AG ++
Sbjct: 615 YMSLINGHVTAGNSKE 630
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 19/351 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG---LFDKAFSLLEHMKNTPDCQ 60
+ ++P +A E F+ ++D + ALL+A R+G L ++A+ L+ + D +
Sbjct: 99 QSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVL----SSDSE 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ T +I++ S K+ FDK ++S+M + + P+ VT+N LIDA RA
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M ++ +P + T N L+ + D ++ + + P + +FNIL+ + +
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ + MQ+ + +V+++ +I F G + R M+ + P V
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ + AG + LR D + D V +N L++ + + + +L
Sbjct: 335 YTMVIGGFCRAG---SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN 391
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
M++RG PD T+ T++ Y +G F+ ++ D RPD
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDG------NFEKALQLFDTLLHQRLRPD 436
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ L+S+ G +L E PDV +++++IK + K
Sbjct: 210 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 269
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M+ G P+TVT+N L+D R + L ++ + C P+V T +
Sbjct: 270 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 329
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G+++ Y ++GI P+ T+N+L++ YGK G V + M +
Sbjct: 330 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 389
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+VT++ +ID + R G L ++ M RI+P+ T ++ + + ++ +
Sbjct: 390 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGL 449
Query: 261 LRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L ++ DI +N ++D + E + + M+++GC+PDK TY ++ Y
Sbjct: 450 LNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYC 509
Query: 320 TNGMKNHAKE----FQDLVE 335
MK+ E F ++VE
Sbjct: 510 ---MKSRISEAIMFFHEMVE 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 133/334 (39%), Gaps = 38/334 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q +KA EL + M + GC +T + L+ R+ + +L ++ C
Sbjct: 260 GVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCM 319
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ +I KA + A+ +DM GI PNTVTYN LI+ YG+
Sbjct: 320 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 379
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M C PDV T + + + GQ+D + + IQP++ TF+I++ S K
Sbjct: 380 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 439
Query: 181 AGHF-EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
E + + E + + YN VID + G + + + + M + +P
Sbjct: 440 QNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKY 499
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ Y S I +FF+ +V+A
Sbjct: 500 TYTILIIGYCM---------------KSRISEAIMFFHEMVEA----------------- 527
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
GC PD +T + GM N L
Sbjct: 528 ---GCSPDSITVNCFISCLLKAGMPNEVDHVMRL 558
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ S ++ RSG A L + M PD S L+ SC A D L
Sbjct: 143 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 202
Query: 86 LSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LS S G R YN L+ + GR ++ + L + PDVW+
Sbjct: 203 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWS--------- 253
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
FN+++ + G +K ++E M ++ S V
Sbjct: 254 --------------------------FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV 287
Query: 205 TYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T+NI++D R ++ + E L RL R P+ VT S++ Y AGK E +V
Sbjct: 288 THNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYND 347
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ S IM +TV +N L++ YG++ V + M + C PD VT+ +++ Y G
Sbjct: 348 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 407
Query: 324 KNHA 327
+ A
Sbjct: 408 LDDA 411
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 11/330 (3%)
Query: 2 LGKCKQPEKAHELF--------QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM 53
L + + +A ELF ++ + + CD S+TA +S S D+A L+ M
Sbjct: 37 LSRLGKDRRAMELFDWLRSANERSPLRQLCD--VYSYTATISLCIYSQDVDRAMELMNEM 94
Query: 54 KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
+ + + +V+T++ L+ C+K + ++M PN VTYNTL+D YG+
Sbjct: 95 RQR-NIERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGR 153
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
+ L M E EP + T N + A Q Y++ S G P+ T+N
Sbjct: 154 WERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGYTPNSTTYNA 213
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+ +YGK K V + M + + +++TY+ +I A +AG + +F M+ +
Sbjct: 214 LISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDN 273
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ VT SLV A G+ EK V + D V + L+ AY R + +
Sbjct: 274 CVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKAL 333
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
M +GCKPD + Y ++ G+
Sbjct: 334 QAFGKMCMQGCKPDAIVYNAIIDTLWETGI 363
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 152/329 (46%), Gaps = 13/329 (3%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-----DVNTYSILIKSCLKAFAFD 80
++++ LL R G +A L + +++ + P DV +Y+ I C+ + D
Sbjct: 26 DSRAVALLLKDLSRLGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISLCIYSQDVD 85
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ L+++M + I N T+ L++ + K+ +E+ M + +C P+V T N
Sbjct: 86 RAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEI-YNNMRAANCMPNVVTYNTL 144
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ +G G+ + + + G++P + T+N L+ + + AV + + Y
Sbjct: 145 VDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGY 204
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ TYN +I A+G+ L + +++ M + ++ S +T SL+ A AG+ E
Sbjct: 205 TPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALR 264
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + + + +TV +N LV A + + + V E M GC PD VTY ++ AY
Sbjct: 265 IFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYE 324
Query: 320 TNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G ++Q ++ + C+ +PD
Sbjct: 325 RGG------QWQKALQAFGKMCMQGCKPD 347
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q KA E++Q M+ + + + ++++L+SA ++G ++ A + M+ +C P+
Sbjct: 219 GKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQD-NCVPN 277
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ L+ +C + ++K + M+ G P+ VTY LI AY R + +
Sbjct: 278 TVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAFG 337
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
KM + C+PD N + +G I + + F +A
Sbjct: 338 KMCMQGCKPDAIVYNAIIDTLWETGIIWAQGRALQLFLTA 377
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 143/327 (43%), Gaps = 2/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A LF M D + +T LL Y + G +KA L E MK C P V
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA-GCSPTV 303
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LIK KA D+ DM G+ P+ V N L++ G+ E+ +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSE 363
Query: 124 MLSEDCEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C P V + N ++A F + + + ++K ++ + PS T++IL+D Y K
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK ++E M + + Y +I+A G+A + + LF+ ++ S
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYA 483
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ +G GK + + + N D +N L+ + E +L M++
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE 329
GC+ D ++ ++ ++ G+ A E
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIE 570
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 8/343 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
ML + Q EK HE++ M +EG C +T +++AL+S+Y + G D A L + MK+ +C
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD--NC 263
Query: 60 -QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QP Y+ L+ K +K L +M G P TY LI G+A E
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS- 177
ML + PDV +N + G G+++ + + + P++ ++N ++ +
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ H ++S+ + M+ S + TY+I+ID + + +++ L M + P
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
CSL+ A G A + E + + + + + + + ++ +G+ +E +
Sbjct: 444 PAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M+ +G PD Y ++ GM N A L+ KM+E
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEA---NSLLRKMEEN 543
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 143/354 (40%), Gaps = 72/354 (20%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD-- 58
K + EKA +LF+ M GC ++T L+ G++G D+A+ + M TPD
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 59 -----------------------------CQPDVNTYSILIKSCLKAFA-FDKVQALLSD 88
C P V +Y+ +IK+ ++ A +V +
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL-------- 140
M + P+ TY+ LID Y + E L L++ + E P C+L
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNR-VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 141 ----------------------------RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ FG G++ + + ++ G P + +N
Sbjct: 459 RYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+ KAG + ++++ M++ I ++NI+++ F R G ++ +F ++
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
IKP VT +L+ + HAG E+ ++R + + D + ++ ++DA G +
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDC 59
G CK + EKA L + M ++G ++ +L++A G++ ++ A L + +K N +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNV 477
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
V Y+++IK K + L ++M QG P+ YN L+ +A M E
Sbjct: 478 SSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM C D+ + N L F +G + +E + +GI+P T+N LL +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
AG FE+ + +M M+ + + +TY+ ++DA G
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 39/311 (12%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ L+ A GR+ + KA S+ K C+P +TY+ +I ++ +KV + ++M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G DC PD T + + ++ G+
Sbjct: 224 CNEG----------------------------------DCFPDTITYSALISSYEKLGRN 249
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D+ + +++ + +QP+ + LL Y K G EK + E M++ S T+ TY +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I G+AG + + ++ M + + P V L +L+ G G+ E+L +V +
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 270 MLDTVFFNCLVDAYGRLKC-FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
V +N ++ A K +E+ + M+ P + TY ++ Y N +
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT---NRVE 426
Query: 329 EFQDLVEKMDE 339
+ L+E+MDE
Sbjct: 427 KALLLLEEMDE 437
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 41/359 (11%)
Query: 3 GKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK H E+ M+ EG D + ++ +++S + G +A +L+ M T DC
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDCS 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AEMEL 119
P+ TY+ LI + K ++ L ++++GI P+ T+N+LI + MEL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M S+ CEPD +T N + + + G++D ++ + +G S+ T+N L+D +
Sbjct: 423 -FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA--------------------------- 212
KA + + + M+ + S VTYN +ID
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 213 --------FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
F R GD+K+ + + M S +P VT +L+ AG+ E +LR I
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQQRGCKPDKVTYRTMVRAYSTNG 322
I L +N ++ R + E + E+++Q PD V+YR + R G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 149/362 (41%), Gaps = 36/362 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++ + M C+ T +F L+ +Y + L D+ S+++ M + +P
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + Y+ ++ + + V+ + MS GI+P+ T+N LI A RA L L
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------ 163
M S PD T ++ + G +D + E+ G
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 164 ---------IQ---------PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
IQ P TFN L++ KAGH + +M+ M + Y + T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN VI + G++K+ + M + P+ VT +L+ + E+ + R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ I+ D FN L+ + + E M+ +GC+PD+ TY ++ + + G +
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 326 HA 327
A
Sbjct: 453 EA 454
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 4/323 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK+ E A Q M ++ G + +F L++ ++G A +++ M
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GY 326
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ +I K + +L M T+ PNTVTYNTLI + E
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ S+ PDV T N ++ + + +E+ +S G +P T+N+L+DS
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++ +++ M+ + +++TYN +ID F +A ++ E +F M + + V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + + E ++ + D +N L+ + R + +++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
GC+PD VTY T++ G
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAG 589
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELF+ M +GC+ + ++ L+ + G D+A ++L+ M+ + C V TY+ LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLI 477
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA + + + +M G+ N+VTYNTLID +++ + + +M+ E +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T N L F G I + S G +P I T+ L+ KAG E S +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPSCVTLCSLVRAYG 249
+ +Q + T YN VI R + LFR ++ P V+ + R
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 250 HAGKP 254
+ G P
Sbjct: 658 NGGGP 662
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 3/327 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + + MV+ GC + S ++ + + G + A + ++ M N PD T++ L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ M +G P+ TYN++I + E L +M++ DC
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N + Q++ + S GI P + TFN L+ + +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M+ TYN++ID+ G L + + + M S +T +L+ +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A K + + ++ + ++V +N L+D + + + +++ M G KPDK T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKM 337
Y +++ + G K+ D+V+ M
Sbjct: 543 YNSLLTHFCRGG---DIKKAADIVQAM 566
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 18/312 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ +L GRSG FD +LE MK++ C+ +T+ ILI+S + D++ +++ M
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSS-RCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 90 STQ-GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ G++P+T YN +++ +E++ KM +PDV T N ++A + Q
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ E S G+ P TF ++ Y + G + + E M ++ SW+ V+ N+
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 209 VIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F + G ++ + ++ + + P T +LV AG V I+
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH------VKHAIEIM 318
Query: 268 DIML------DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
D+ML D +N ++ +L E VL+ M R C P+ VTY T++ ST
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI---STL 375
Query: 322 GMKNHAKEFQDL 333
+N +E +L
Sbjct: 376 CKENQVEEATEL 387
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM----- 194
L G SG D M+K E +S+ + +TF IL++SY + +++ +V+++M
Sbjct: 90 LLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFG 149
Query: 195 ---QKYHYS------------------------WTI----VTYNIVIDAFGRAGDLKQME 223
+ Y+ W I T+N++I A RA L+
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ M S + P T ++++ Y G + + + V N +V +
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 284 ---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
GR++ + + E+ Q G PD+ T+ T+V G HA E D++
Sbjct: 270 CKEGRVE--DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 12/331 (3%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ LL+ G A +L E PDV +++++IK + K
Sbjct: 41 GCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQK 100
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M+ G P+T+T N L+D R K + L ++ + C P+V T +
Sbjct: 101 ALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVI 160
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G++ Y +G +P+ T+N+L++ YGKA E SAV Y Q +S
Sbjct: 161 SGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDME--SAVRMYWQLILHS 218
Query: 201 WT--IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VT+N +ID + R G L ++ M I+P+ T ++ + + +
Sbjct: 219 CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEAL 278
Query: 259 SVLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S+LR ++ +DI+ T +N ++D + E ++ M+++GC PDK TY ++
Sbjct: 279 SLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIG 338
Query: 318 YSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ MK E L KM ET RPD
Sbjct: 339 HC---MKGRIPEAVTLFHKMVETGC---RPD 363
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 129/323 (39%), Gaps = 36/323 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA EL + M + GC +T + L+ R +K +L ++ C P+V TY+
Sbjct: 99 QKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTS 158
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA ++ +DM G RPNTVTYN LI+ YG+A +++
Sbjct: 159 VISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHS 218
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKM 187
C PDV T N + + GQ+D + + + IQP++ TF+I++ S E +
Sbjct: 219 CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEAL 278
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
S + E + YN +ID + G + + + M + P T L+
Sbjct: 279 SLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILI-- 336
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GH K GR+ E + M + GC+PD
Sbjct: 337 IGHCMK------------------------------GRIP---EAVTLFHKMVETGCRPD 363
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
+T + + GM N +
Sbjct: 364 NITINSFISCVLKAGMPNEVHQI 386
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 13/284 (4%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID---AYGRAKMFAEM 117
PD +S + SC A D LL+ S G R YN L++ A+GR A+
Sbjct: 9 PDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGR----AQD 64
Query: 118 ELTLVKMLSEDC--EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ L + +D PDVW+ N ++ G + + E+ G P T NIL+
Sbjct: 65 AVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILV 124
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
D + K V+ +Q+ +VTY VI + +AG +K ++ M
Sbjct: 125 DGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGT 184
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P+ VT L+ YG A E + + D V FN L+D Y R +
Sbjct: 185 RPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMR 244
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ M Q +P+ T+ ++ + T +N + E L+ +++
Sbjct: 245 IWMEMGQHHIQPNVYTFSIIIHSLCT---QNRSAEALSLLRELN 285
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 2/190 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A ++ ++ C + +F +L+ Y R G D A + M QP+
Sbjct: 199 GKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQH-HIQPN 257
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V T+SI+I S + +LL +++ + I P T YN +ID + E L +
Sbjct: 258 VYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIV 317
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C PD +T + G+I + K G +P T N + KA
Sbjct: 318 TDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKA 377
Query: 182 GHFEKMSAVM 191
G ++ +M
Sbjct: 378 GMPNEVHQIM 387
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 161/331 (48%), Gaps = 23/331 (6%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC--QPDVNTYSIL 69
H + A D+G D+ +F + L G D F LL + N D +P++ TY+ +
Sbjct: 123 HAIRFASDDKGIDSVLLNFESRLC-----GSDDYTF-LLRELGNRGDSGLKPNLVTYNAV 176
Query: 70 IKSCLK--------AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT- 120
I +C K A FD++ L S+M +GI + TYNTL+DA + +M+L
Sbjct: 177 IDACGKGGVDFNRAAEIFDEMN-LFSEMLYRGIEQDIFTYNTLLDAVCKG---GQMDLAF 232
Query: 121 --LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ +M + P+V T + + + +G++D + + + A I ++N LL Y
Sbjct: 233 QIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIY 292
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G FE+ V + M+ VTYN ++ +G+ G ++++ +F M++ERI P+
Sbjct: 293 AKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL 352
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +L+ Y G ++ V R + + D V ++ L+DA + L+
Sbjct: 353 LTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDE 412
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M + G +P+ VTY +++ A+ +G+ A E
Sbjct: 413 MTKEGIRPNVVTYNSIIDAFGRSGIVEDATE 443
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 25/321 (7%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF M+ G + + ++ LL A + G D AF ++ M P+V TYS +I
Sbjct: 199 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK-HIMPNVVTYSTVIDGY 257
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
KA D+ L ++M I + V+YNTL+ Y + F E +M S + D
Sbjct: 258 AKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDA 317
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N L +G G+ + +++ +E+ ++ I P++ T++ L+D Y K G +++ V
Sbjct: 318 VTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFRE 377
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+K +V Y+ +IDA + G ++ M E I+P+ VT S++ A+G +G
Sbjct: 378 FKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGI 437
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK----CFA--EMKGVLEV--------- 298
E D ++ + N ++ +G+L C A E +G E+
Sbjct: 438 VE---------DATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHK 488
Query: 299 MQQRGCKPDKVTYRTMVRAYS 319
M + KP+ VT+ ++ A S
Sbjct: 489 MHELDIKPNVVTFSAILNACS 509
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E+ +F+ M E N +++ L+ Y + GL+ +A + K + D
Sbjct: 328 GKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKA-GLKAD 386
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V YS LI + K + + L +M+ +GIRPN VTYN++IDA+GR+ + + + V
Sbjct: 387 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEV 446
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------I 164
ED N ++ FG Q+ + C+ K ++ G I
Sbjct: 447 GD-KED--------NQIIKIFG---QLAAEKTCHAKKENRGRQEILCILAVFHKMHELDI 494
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+P++ TF+ +L++ + FE S ++E ++ +
Sbjct: 495 KPNVVTFSAILNACSRCNSFEDASMLLEELRLF 527
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 6/265 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ E KA + M G + + S+ AL+ +G D A ++ + M N
Sbjct: 392 GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR-GIL 450
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD N Y++L+ K + +L++M Q I P+ Y TL+D + R E +
Sbjct: 451 PDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKL 510
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ + +P V N ++ F SG +D C +K + A P I TF+ ++D Y K
Sbjct: 511 FQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVK 570
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M K + +VTY +I+ + R G+ K E LF +MRS +KPS VT
Sbjct: 571 QHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVT 630
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFID 265
L+ G K KLG + + +
Sbjct: 631 YSILI---GSFCKEAKLGKAVSYFE 652
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ E+A +L + + G N ++T L+ Y + G + KA L M +T + D+ +Y
Sbjct: 363 EVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEM-STSGLEVDMISY 421
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
LI + A D + M +GI P+ YN L++ + + ++ L +ML
Sbjct: 422 GALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLD 481
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
++ PD + + F G +D +K ++ G+ P + +N+++ + K+G +
Sbjct: 482 QNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDN 541
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M++ H+ I T++ +ID + + ++ + +F LM + KP+ VT SL+
Sbjct: 542 AILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLIN 601
Query: 247 AYGHAGK---PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
Y G+ EKL S++R + + V ++ L+ ++ + + E+M
Sbjct: 602 GYCRKGETKMAEKLFSMMR---SHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
C P+ + +V ++ ++E +L E
Sbjct: 659 CTPNDAAFHYLVNGFTNTKATAVSREPNNLHE 690
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 1/319 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +L ++ +GC N + L+ Y + G + A+ L + +K P + T+
Sbjct: 225 EDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLK-MKGFIPTLQTFGS 283
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K F+ + LL +M +G+ N YN +IDA + + + TL +M
Sbjct: 284 LVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC 343
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CEPD+ T N + F + G+++ EK E+ G+ P+ T+ L+ Y K G + K +
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M +++Y +I AG++ + M + I P L+
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK +L + + +I D + LVD + R E K + +++ ++G P
Sbjct: 464 FKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGV 523
Query: 309 VTYRTMVRAYSTNGMKNHA 327
V Y M++ +S +GM ++A
Sbjct: 524 VGYNVMIKGFSKSGMMDNA 542
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 150/342 (43%), Gaps = 8/342 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDE--GCDANTQSFTALLSAYGR--SGLFDKAFSLLEHMKNT 56
+L K ++ E AH+L+ M+D G D ++T + G G + L+E +
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIES-RWG 236
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C P++ Y+ LI K + L + +G P T+ +L++ + + MF
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
++L L++M +V N + A G + ++ +P + T+N L++
Sbjct: 297 IDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLIN 356
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD-LKQMEYLFRLMRSERIK 235
+ G E+ ++E + + +TY ++ + + G+ K +YL M + ++
Sbjct: 357 HFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIE-MSTSGLE 415
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
++ +L+ AG+ + ++ + N I+ D +N L++ + + K +
Sbjct: 416 VDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVM 475
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
L M + PD Y T+V + +G + AK+ FQ ++EK
Sbjct: 476 LTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEK 517
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 43/330 (13%)
Query: 9 EKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDCQPDVN 64
+KA E++ +V +T + +LL+ + + A L + M N D D
Sbjct: 150 DKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNY 209
Query: 65 TYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T SI++K CLK D ++ L+ +G PN V YNTLID Y +
Sbjct: 210 TTSIMVKGLCLKGRIEDGIK-LIESRWGKGCVPNIVFYNTLIDGYCK------------- 255
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
G++++ K ++K + G P++ TF L++ + K G
Sbjct: 256 ----------------------KGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGM 293
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG-DLKQMEYLFRLMRSERIKPSCVTLC 242
FE + ++ M+ S + YN +IDA + G D+K + L + M +P VT
Sbjct: 294 FEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTL-KEMSENCCEPDLVTYN 352
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ + G+ E+ +L + + + + LV Y + + + L M
Sbjct: 353 TLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTS 412
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G + D ++Y ++ G + A +D
Sbjct: 413 GLEVDMISYGALIHGLVVAGEVDTALTIRD 442
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 121/273 (44%), Gaps = 12/273 (4%)
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVW 134
F +++ L +M T+ P + ++ AY G E+ +VK+ + P +
Sbjct: 113 VFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKL--HNSLPSTY 170
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKF--QSAGIQPSINTF--NILLDSYGKAGHFEKMSAV 190
N L +I+T + Y++ + G ++ + +I++ G E +
Sbjct: 171 ACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKL 230
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E IV YN +ID + + G+++ LF+ ++ + P+ T SLV +
Sbjct: 231 IESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCK 290
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E + +L + + + ++ +N ++DA +L + K L+ M + C+PD VT
Sbjct: 291 MGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVT 350
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
Y T++ + + G +E + L+E+ LA
Sbjct: 351 YNTLINHFCSRG---EVEEAEKLLEQTIRRGLA 380
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S++ LL + G +A LL M + C PDV YS +I K +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTY++++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T ++L+ S K G ++ V + M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +Y I+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 357 PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 416
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 477 HGSLLKAKEL 486
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 158/365 (43%), Gaps = 43/365 (11%)
Query: 10 KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNT 65
+A +L + M + G C + +++ ++ + + G +KA L + M + P PD T
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDFVT 256
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
YS ++ + KA A DK +A L M +G+ PN TYN LI Y + E +M
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
PDV T++ + + G+I ++ G P++ ++ I+L+ Y G
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
M+ + + M + I T+N++I A+ G L + +F MR +KP VT +++
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 246 RAYGHAGK-----------------PEKL------------GSVLRF------IDNSDIM 270
A GK P+K GS+L+ I N+ +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
LD VFF+ +++ +L + + + ++ G P V Y ++ Y G M+ +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 330 FQDLV 334
F +V
Sbjct: 557 FDAMV 561
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 6/320 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ++F M +G + N S+T +L+ Y G L + M PD
Sbjct: 338 GKIKE---ARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD-GIAPD 393
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
+ T+++LIK+ DK + ++M G++P+ VTY T+I A R KM ME
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME-KF 452
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PD + +C ++ F G + ++ + + G+ I F+ ++++ K
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + T V Y++++D + G +++ +F M S I+P+ V
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+LV Y G+ ++ S+ R + I T+ +N ++D K M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
G +K TY ++R N
Sbjct: 633 SGIAMNKCTYNIVLRGLFKN 652
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAAS---R 100
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P +TY+IL+ C +A + A + G+R N + N L+ + AK
Sbjct: 101 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAK 160
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ + L++ G SGQ D + + + A P +
Sbjct: 161 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-GGAVCSPDV 219
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
++ ++D + K G K + + M + VTY+ V+ A +A + + E R
Sbjct: 220 VAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ 279
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++ + P+ T +L+ Y G+ ++ V + + I+ D V + L+ + YG+
Sbjct: 280 MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G P+ +Y M+ Y+T G
Sbjct: 340 IK---EARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 131/303 (43%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G + +F L+ AY G+ DKA + M++ +PDV TY +I +
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAA 438
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ Y+ LI + + + + ++++ D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + + G++ + ++ + G+ P+ +++L+D Y G EK V +
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M V Y +++ + + G + + LFR M + IKPS + ++ AG
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I ++ +N ++ + +CF E + + ++ K + +T
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 313 TMV 315
TM+
Sbjct: 679 TMI 681
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 125/308 (40%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N D+ +S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSS 504
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P V Y+ L+D Y + M+S
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+ + + G+ID + + GI+PS +NI++D +AG
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + TYNIV+ + + +LF+ +R+ +K + +TL +++
Sbjct: 625 VKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+PD
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744
Query: 309 VTYRTMVR 316
+VR
Sbjct: 745 RLLNHVVR 752
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 1/273 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F V+ G ++ L+ Y G +KA + + M + +P+ Y L+
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNDVVYGTLV 576
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D+ +L +M +GI+P+T+ YN +ID A ++ +M
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+ T N LR + D +++ ++ ++ +I T N ++ + E+ +
Sbjct: 637 MNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + +VTY+I+I + G +++ E +F M++ +P L +VR
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ + G+ L ID + L+ + LVD +
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 34/247 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 54 --------KNTP---------DCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P + +N TY+I+++ K FD+ L ++ +
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ N +T NT+I + + E + + P V T + + G ++ E
Sbjct: 671 KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P N ++ K + A + + + ++S +T +++D F
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFS 790
Query: 215 RAGDLKQ 221
G ++
Sbjct: 791 SKGTCRE 797
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 159/333 (47%), Gaps = 3/333 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E + M +G N+ ++ ++ Y +G++ KA ++E ++ D + Y+
Sbjct: 143 EDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREM-GMPLDKHIYNS 201
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K D+ +LS+M QGI P+ VT+N+LI + +A ++ KM ++
Sbjct: 202 IIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQG 261
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD + + G+ + + + ++ +S G + S + IL+D YG+ G F+
Sbjct: 262 LYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAE 321
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ ++ + + ++ +A+ + G +Q + +LM +E I+P+ + L L+ A+
Sbjct: 322 ECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAF 381
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G AG+ + S+ + S I D V ++ L+ AY R + F E+ + M+ GC PDK
Sbjct: 382 GIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDK 441
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ A G +N +FQ + + + C
Sbjct: 442 KAREILQAALMVLGRRNC--KFQIFLAMLADIC 472
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 7/338 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + + + D G N +++ LL +G + +S++ MK Q + YS +I
Sbjct: 110 AERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVINEMKQK-GFQLNSFVYSKVI 168
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K ++ ++ G+ + YN++ID +G+ E L M +
Sbjct: 169 GLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGIT 228
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N +R +G + + + K Q+ G+ P ++ + G + +
Sbjct: 229 PDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIREN 288
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ + Y + Y I++D +G+ G + E ++SE I PS C L AY
Sbjct: 289 FDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQ 348
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G E+ VL+ ++ I + + N L++A+G E + M++ G PD VT
Sbjct: 349 QGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVT 408
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
Y T+++AY A++F ++ E E + PD
Sbjct: 409 YSTLMKAYI------RARKFDEVPEIYSEMESSGCTPD 440
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+ I C K DK LL+DM + G P++++Y LI+ E E +M
Sbjct: 23 SYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEM 82
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ +P + N LR F G + E+ G+ + T+ ILLD AG
Sbjct: 83 MCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRL 142
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E +V+ M++ + Y+ VI + G K+ + +R + S+
Sbjct: 143 EDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSI 202
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ +G G+ ++ VL + I D V +N L+ + + ++ + MQ +G
Sbjct: 203 IDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGL 262
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
PD T++ + G N +E D+++
Sbjct: 263 YPDPKILVTIISRLAEQGKWNIIRENFDIMK 293
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 142/349 (40%), Gaps = 36/349 (10%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + + +S+ + + + G DKA +LL M++ P +Y+ LI++ L +
Sbjct: 16 GQELSGESYNSCICDCCKVGDVDKAMTLLADMQSL-GFHPSSLSYTCLIETLLSVGRTLE 74
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+AL +M G++P YN ++ + + + E L + + T L
Sbjct: 75 AEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLD 134
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
N+G+++ + + G Q + ++ ++ Y G ++K ++E +++
Sbjct: 135 YNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPL 194
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-------- 253
YN +ID FG+ G+L + + M+ + I P VT SL+R + AG
Sbjct: 195 DKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELF 254
Query: 254 -----------PEKLGSVLRFI----------DNSDIM------LDTVFFNCLVDAYGRL 286
P+ L +++ + +N DIM + LVD YG+
Sbjct: 255 SKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQY 314
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
F + + + ++ G P + + AY+ G+ + L+E
Sbjct: 315 GRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLME 363
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 74/178 (41%)
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+S G + S ++N + K G +K ++ MQ + + ++Y +I+ G
Sbjct: 13 ESTGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRT 72
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ E L++ M +KP ++R + G VLR +D+ + + + L
Sbjct: 73 LEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEIL 132
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+D + V+ M+Q+G + + Y ++ Y NGM A + + +M
Sbjct: 133 LDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREM 190
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 43 FDKAFSLLEHMKNTPDC-QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
+++A + E N C + +V Y+I++ + KA + V++L +M+ +GI+P TY
Sbjct: 167 WERALEIFEWF-NMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTY 225
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
TLID Y + E + L +M + EPD TM ++ + +G+ E ++K+ S
Sbjct: 226 GTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSS 285
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
N+ + + KA + S+ + H S + TYN +ID +G+AG LK+
Sbjct: 286 C------NSMKYEITNKKKAASVKVESS----LHPPHVSLSTYTYNTLIDTYGKAGQLKE 335
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
F M E + P+ VT +++ G+ G+ +++ +++ ++ DT +N L+
Sbjct: 336 ASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILIS 395
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y + M++ G +PD V+YRT++ AYS M E + L+ +MDE
Sbjct: 396 LYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHM---VAEAEKLITEMDERG 452
Query: 342 LAM 344
L +
Sbjct: 453 LEI 455
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 148/373 (39%), Gaps = 59/373 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK ++ L+ M +G ++ L+ Y + G ++A LE M N +P
Sbjct: 197 LGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERM-NEQGMEP 255
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMST--------------------QGIRP----- 96
D T I+++ KA F K ++ S+ + P
Sbjct: 256 DEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSL 315
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+T TYNTLID YG+A E T ML E P T N + GN GQ+ +
Sbjct: 316 STYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLM 375
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+K + P T+NIL+ Y K + + S M++ IV+Y ++ A+
Sbjct: 376 QKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIR 435
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RF------------ 263
+ + E L M ++ T +L R Y AG E+ S RF
Sbjct: 436 HMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYS 495
Query: 264 --IDNSD-----IMLDTVF-------------FNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
ID + + VF FN ++ AYG +K +A+ + + + M+ G
Sbjct: 496 ANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNG 555
Query: 304 CKPDKVTYRTMVR 316
PDK +Y ++++
Sbjct: 556 VVPDKCSYSSLIQ 568
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 139/325 (42%), Gaps = 13/325 (4%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+++ ++A + AYG G +A + + C V ++++IK+ + K Q +
Sbjct: 490 SSECYSANIDAYGERGFILEAERVFVSCQEEKKCT--VLEFNVMIKAYGVVKDYAKAQKI 547
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M + G+ P+ +Y++LI A M A L KM S D + + +F
Sbjct: 548 FDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSK 607
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G ++ +K Y + G+QP I + +L++++ AG ++ + M++ S V
Sbjct: 608 LGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVI 667
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I + + G LK+ ++++ P+ + ++ Y ++ + +
Sbjct: 668 YNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLK 727
Query: 266 NSDIMLDTVF--FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ F C+ GR++ E V M+++G D +++ M+ Y+ +G
Sbjct: 728 KKGEANEFTFAMMLCMYKKIGRIQ---EAICVARQMKEQGLLSDLLSFNNMISLYAMDG- 783
Query: 324 KNHAKEFQDLVEKMDETCLAMKRPD 348
F++ V E A +PD
Sbjct: 784 -----RFKEAVSIFQEMMKAAVQPD 803
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 161/357 (45%), Gaps = 29/357 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
Q KA F+ M ++T + ++ + G +A L M+ C PDV T
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ S + +A+ M +G++PN V YN+L+ AY M E L + ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHRE-ALAIFNLI 249
Query: 126 SED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ PD+ + L A+G S Q + + + K + +P+ ++N L+D+YG AG
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ ++ M+K +V+ + ++ A GR + ++E + RS I + V S
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSG 369
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF--------------- 289
+++Y G EK + + S++ D V +N L+ +L +
Sbjct: 370 IKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKV 429
Query: 290 --------AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+E + M++ GC PD +TY T+++AY+ G K DL ++M+
Sbjct: 430 SSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGG---GWKRAWDLFKEME 483
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 163/359 (45%), Gaps = 38/359 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ + Q ++A LF M + C + + +L+ A+ R+G + A +++E M
Sbjct: 20 LYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAA-IP 78
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMF 114
P TY+ +I +C A + K L M+ G+ P+ VT+N ++ A Y +A +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 115 AEM----------------------------ELTLVKMLSE---DCEPDVWTMNCTLRAF 143
E+ + L + E C PDV T + ++
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
GQ++ + ++ + G++P+I +N LL +Y G + A+ ++K I
Sbjct: 199 CIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V+Y +++A+GR+ ++ +F M+ KP+ V+ +L+ AYG AG ++ +L
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ I D V + L+ A GR + ++ +LE + RG + V Y + +++Y + G
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFG 377
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ Y R D+A L M+ C+PD + Y+ LI + +A +
Sbjct: 9 ARNDIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAIN 67
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ DM I P TYN +I+A G A + + KM PD+ T N L A
Sbjct: 68 IMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALK 127
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
N Q +E + A + T NI++ K G + + M++
Sbjct: 128 NGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPD 187
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTY ++ ++ G ++ + +F LM +E +KP+ V SL+ AY G + ++
Sbjct: 188 VVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFN 247
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + + D V + L++AYGR + + V M++ CKP+KV+Y ++ AY + G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPD 348
M KE L+ +M++ + +PD
Sbjct: 308 M---LKEAVGLLHEMEKDGI---QPD 327
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 10/339 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +KA EL + M + G + + +LSA + KA S E MK + D
Sbjct: 92 GAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGA-NVTSD 150
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K + L + M + + P+ VTY +++ +Y +
Sbjct: 151 TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAI 210
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E +P++ N L A+ + G + + G++P I ++ LL++YG+
Sbjct: 211 FDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGR 270
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ EK V M+K V+YN +IDA+G AG LK+ L M + I+P V+
Sbjct: 271 SAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVS 330
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV-- 298
+ +L+ A G + ++ ++L + I L+TV +N + +Y F + + LE+
Sbjct: 331 ISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY---LSFGDYEKALELYT 387
Query: 299 -MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
M++ KPD VTY ++ S G + + F+D+V+
Sbjct: 388 SMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVD 426
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 19/273 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E+F M C N S+ AL+ AYG +G+ +A LL M+ QPD
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKD-GIQPD 327
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL- 121
V + S L+ +C + +++ +L ++GI NTV YN+ I +Y F + E L
Sbjct: 328 VVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY---LSFGDYEKALE 384
Query: 122 --VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M + +PD T N + G+ + +E + + +
Sbjct: 385 LYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST------------ 432
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K ++TY +I A+ G K+ LF+ M I P +
Sbjct: 433 KEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAI 492
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
SL+ A+ G+PE++ ++ F+ I L+
Sbjct: 493 ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLN 525
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
MKN + + Y ++I+ + D+ + L +M +P+ YN+LI A+ RA
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG 60
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ + ML P T N + A G +G + +K G+ P + T N
Sbjct: 61 QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHN 120
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+L + + K + E M+ + + T NI+I + G + LF MR
Sbjct: 121 IVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRER 180
Query: 233 RIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
R K P VT S++ +Y G+ E ++ + + + V +N L+ AY
Sbjct: 181 RTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHR 240
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
E + ++++ G +PD V+Y +++ AY + A+E + ++K
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 110/300 (36%), Gaps = 73/300 (24%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C+Q + + +A G D NT ++ + + +Y G ++KA L M+ + + +PD
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES-NVKPD 397
Query: 63 VNTYSILIK-----------------------SCLKAFAFDKVQALLSDMSTQGIRPNTV 99
TY+ILI S K + ++ S M G P+ +
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVL 457
Query: 100 TYNTLIDAYG------RA-KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ---- 148
TY TLI AY RA +F EME+ + PD + + AF G+
Sbjct: 458 TYTTLIQAYNAGGGWKRAWDLFKEMEVNGIP-------PDAIICSSLMEAFNKGGEPERV 510
Query: 149 -----------IDTMEKCY--------------------EKFQSAGIQPSINTFNILLDS 177
I +K Y E S+ S+ T N +L+
Sbjct: 511 LQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNF 570
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GK G E M + M + + TY +V+ G ++ + + M + P+
Sbjct: 571 LGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPT 630
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 8/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K KA + M G N ++ ++ Y SG + A ++L MK +PD
Sbjct: 235 GKLK---KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPD 290
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ + +M +G+RP+ V YNTLID +
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML + P + T N + A + D E ++ Q GI P T+NIL++ Y +
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA 410
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K + + M T TY ++ + +K+ + LF+ + SE + P +
Sbjct: 411 NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFN 470
Query: 243 SLVRAYGHAGKPEKLGS--VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ GH G+ +L+ +D + D V FN ++ + R E + + + M+
Sbjct: 471 ALID--GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+RG KPD +++ T++ YS G
Sbjct: 529 RRGIKPDHISFNTLISGYSRRG 550
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E F M ++G ++ +LLS + + + A+ L M + V T++I
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRL-RIKSSVYTFNI 226
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K K + + M T G++PN VTYNT++ Y + + L M +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPD +T + G+++ K +E+ G++PS +N L+D + G+ + S
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 189 AVMEYMQKYHYSWTI-----------------------------------VTYNIVIDAF 213
A + M K S T+ +TYNI+I+ +
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R + K+ L M + IKP+ T SL+ + ++ + + I + ++ D
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466
Query: 274 VFFNCLVDAYGRLKCF-AEMKGVLEV---MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ FN L+D + C + +KG E+ M + PD+VT+ T+++ + G A+E
Sbjct: 467 IMFNALIDGH----CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 330 FQD 332
D
Sbjct: 523 LFD 525
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 147/334 (44%), Gaps = 15/334 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ E+A ++F+ MV +G + + L+ + G D A + + M
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK-GIS 358
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P ++TY+ LI + D+ + ++ ++ +GI P+ +TYN LI+ Y R + L
Sbjct: 359 PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLL 418
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML+ +P T L ++ + ++K S G+ P + FN L+D +
Sbjct: 419 HDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCS 478
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + +++ M + VT+N ++ R G +++ LF M+ IKP ++
Sbjct: 479 NSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHIS 538
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF------FNCLVDAYGRLKCFAEMKG 294
+L+ Y G + R + MLDT F +N LV + + +
Sbjct: 539 FNTLISGYSRRG---DIKDAFRVRNE---MLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+L+ M +G PD TY T++ + + + K
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 109/253 (43%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ LIKSC D+ M +G+ P T N+L+ + + + +M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ V+T N + G++ + +++G++P+I T+N ++ Y +G E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
A++ M++ TY +I + G L++ +F M + ++PS V +L+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + G + + + I +N L+ A + E + +++ +Q++G
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 306 PDKVTYRTMVRAY 318
PD +TY ++ Y
Sbjct: 394 PDAITYNILINGY 406
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + ++A +LF+ + EG + F AL+ + + AF LL+ M
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRM-KVP 498
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ +++ + ++ + L +M +GI+P+ +++NTLI Y R +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML P V T N ++ + + D E+ ++ S G+ P T+ L++ K
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Query: 181 A 181
Sbjct: 619 V 619
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q KA E+F+ M G N +FTA +S+ + G + +A LLE M QP++
Sbjct: 110 KGGQVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMI-AKGIQPNL 168
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
YS I +C KA LL M+ + I+P+ + Y+ ++ A G+A ++ K
Sbjct: 169 QAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQK 228
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M E PDV + ++A+ +G+ + ++ + AG++P++ + + + KAG
Sbjct: 229 MKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGE 288
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + ++E M+ V YN VI A R G L +++ + +P+ T C+
Sbjct: 289 WRRSLGLLERMKADKLRPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCT 348
Query: 244 LVRAYGHAGKPEK 256
+++A G G+ EK
Sbjct: 349 VIKACGDNGQWEK 361
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 8/322 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-------LFDKAFSLLEHMK-NTPDCQ 60
E A E+ +++ EG S+ A +SA R+G +FD FS E K +
Sbjct: 1 EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T+S I +C K + + + +M QGI PN T+ LI A + ++
Sbjct: 61 PDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEV 120
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + +V+T + + G K E+ + GIQP++ ++ + + K
Sbjct: 121 FERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEK 180
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A ++E M I+ Y+ V+ A G+AG + +F+ M+ E + P V
Sbjct: 181 AAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVA 240
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++AY AG+ + V + ++ + + + + + + A + + G+LE M+
Sbjct: 241 YSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMK 300
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+PD V Y ++ A S G
Sbjct: 301 ADKLRPDAVAYNFVISALSRGG 322
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 136/282 (48%), Gaps = 1/282 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
K + ++A ++ M +G + N +F AL++A + G KAF + E M+ +
Sbjct: 74 AKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFERMQ-ARGIVGN 132
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V T++ I SC K + + LL +M +GI+PN Y+ I A +A L
Sbjct: 133 VYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLE 192
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M +E +PD+ + + A G +G + + ++K + G+ P + ++ L+ +Y +AG
Sbjct: 193 RMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAG 252
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + V + M+K ++ Y I A +AG+ ++ L M++++++P V
Sbjct: 253 EWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAVAYN 312
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
++ A G+ + ++L+ ++ + + + ++ A G
Sbjct: 313 FVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACG 354
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAY---GRAK--------MFAEMELTLVKMLSEDCEPDV 133
+L + +G+ P V+YN + A GR + +F++ E K+ + PD
Sbjct: 6 VLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERN--KVAARSLRPDT 63
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + + A G+ Y + ++ GI+P+ TF L+ + K G K V E
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
MQ + T+ I + + GD ++ L M ++ I+P+ + + A A +
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAE 183
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
+L + N I D + ++ ++ A G+ + + + M++ G PD V Y T
Sbjct: 184 ARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYST 243
Query: 314 MVRAYSTNGMKNHAKEFQDLVEK 336
+++AY G + A E L+EK
Sbjct: 244 LIQAYQRAGEWSRALEVFQLMEK 266
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A +FQ M EG + +++ L+ AY R+G + +A + + M+ +P+
Sbjct: 214 GKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKA-GVRPN 272
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V Y+ I +C KA + + LL M +RP+ V YN +I A R + + LTL+
Sbjct: 273 VIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAVAYNFVISALSRGGQW-DAGLTLL 331
Query: 123 KMLSED-CEPDVWTMNCTLRAFGNSGQID 150
+ML ED +P++ T ++A G++GQ +
Sbjct: 332 QMLEEDEAQPNISTYCTVIKACGDNGQWE 360
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 43 FDKAFSLLEHMKNTPDC-QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
+++A + E N C + +V Y+I++ + KA + V++L +M+ +GI+P TY
Sbjct: 166 WERALEIFEWF-NMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTY 224
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
TLID Y + E + L +M + EPD TM ++ + +G+ E ++K+ S
Sbjct: 225 GTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSS 284
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
N+ + + KA + S+ + H S + TYN +ID +G+AG LK+
Sbjct: 285 C------NSMKYEITNKKKAASVKVESS----LHPPHVSLSTYTYNTLIDTYGKAGQLKE 334
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
F M E + P+ VT +++ G+ G+ +++ +++ ++ DT +N L+
Sbjct: 335 ASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILIS 394
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
Y + M++ G +PD V+YRT++ AYS M E + L+ +MDE
Sbjct: 395 LYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHM---VAEAEKLITEMDERG 451
Query: 342 LAM 344
L +
Sbjct: 452 LEI 454
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 148/373 (39%), Gaps = 59/373 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK ++ L+ M +G ++ L+ Y + G ++A LE M N +P
Sbjct: 196 LGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERM-NEQGMEP 254
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMST--------------------QGIRP----- 96
D T I+++ KA F K ++ S+ + P
Sbjct: 255 DEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSL 314
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+T TYNTLID YG+A E T ML E P T N + GN GQ+ +
Sbjct: 315 STYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLM 374
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+K + P T+NIL+ Y K + + S M++ IV+Y ++ A+
Sbjct: 375 QKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIR 434
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RF------------ 263
+ + E L M ++ T +L R Y AG E+ S RF
Sbjct: 435 HMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYS 494
Query: 264 --IDNSD-----IMLDTVF-------------FNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
ID + + VF FN ++ AYG +K +A+ + + + M+ G
Sbjct: 495 ANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNG 554
Query: 304 CKPDKVTYRTMVR 316
PDK +Y ++++
Sbjct: 555 VVPDKCSYSSLIQ 567
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 139/325 (42%), Gaps = 13/325 (4%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+++ ++A + AYG G +A + + C V ++++IK+ + K Q +
Sbjct: 489 SSECYSANIDAYGERGFILEAERVFVSCQEEKKCT--VLEFNVMIKAYGVVKDYAKAQKI 546
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M + G+ P+ +Y++LI A M A L KM S D + + +F
Sbjct: 547 FDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSK 606
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G ++ +K Y + G+QP I + +L++++ AG ++ + M++ S V
Sbjct: 607 LGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVI 666
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I + + G LK+ ++++ P+ + ++ Y ++ + +
Sbjct: 667 YNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLK 726
Query: 266 NSDIMLDTVF--FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ F C+ GR++ E V M+++G D +++ M+ Y+ +G
Sbjct: 727 KKGEANEFTFAMMLCMYKKIGRIQ---EAICVARQMKEQGLLSDLLSFNNMISLYAMDG- 782
Query: 324 KNHAKEFQDLVEKMDETCLAMKRPD 348
F++ V E A +PD
Sbjct: 783 -----RFKEAVSIFQEMMKAAVQPD 802
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 8/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K KA + M G N ++ ++ Y SG + A ++L MK +PD
Sbjct: 235 GKLK---KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPD 290
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY LI K ++ + +M +G+RP+ V YNTLID +
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML + P + T N + A + D E ++ Q GI P T+NIL++ Y +
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA 410
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K + + M T TY ++ + +K+ + LF+ + SE + P +
Sbjct: 411 NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFN 470
Query: 243 SLVRAYGHAGKPEKLGS--VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ GH G+ +L+ +D + D V FN ++ + R E + + + M+
Sbjct: 471 ALID--GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+RG KPD +++ T++ YS G
Sbjct: 529 RRGIKPDHISFNTLISGYSRRG 550
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E F M ++G ++ +LLS + + + A+ L M + V T++I
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRL-RIKSSVYTFNI 226
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K K + + M T G++PN VTYNT++ Y + + L M +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EPD +T + G+++ K +E+ G++PS +N L+D + G+ + S
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 189 AVMEYMQKYHYSWTI-----------------------------------VTYNIVIDAF 213
A + M K S T+ +TYNI+I+ +
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R + K+ L M + IKP+ T SL+ + ++ + + I + ++ D
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466
Query: 274 VFFNCLVDAYGRLKCF-AEMKGVLEV---MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ FN L+D + C + +KG E+ M + PD+VT+ T+++ + G A+E
Sbjct: 467 IMFNALIDGH----CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 330 FQD 332
D
Sbjct: 523 LFD 525
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 146/334 (43%), Gaps = 15/334 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ E+A ++F+ MV +G + + L+ + G D A + + M
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK-GIS 358
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P ++TY+ LI + D+ + ++ ++ +GI P+ +TYN LI+ Y R + L
Sbjct: 359 PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLL 418
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML+ +P T L ++ + ++K S G+ P FN L+D +
Sbjct: 419 HDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCS 478
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + +++ M + VT+N ++ R G +++ LF M+ IKP ++
Sbjct: 479 NSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHIS 538
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF------FNCLVDAYGRLKCFAEMKG 294
+L+ Y G + R + MLDT F +N LV + + +
Sbjct: 539 FNTLISGYSRRGD---IKDAFRVRNE---MLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+L+ M +G PD TY T++ + + + K
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 109/253 (43%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ LIKSC D+ M +G+ P T N+L+ + + + +M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ V+T N + G++ + +++G++P+I T+N ++ Y +G E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
A++ M++ TY +I + G L++ +F M + ++PS V +L+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + G + + + I +N L+ A + E + +++ +Q++G
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 306 PDKVTYRTMVRAY 318
PD +TY ++ Y
Sbjct: 394 PDAITYNILINGY 406
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + ++A +LF+ + EG + F AL+ + + AF LL+ M
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRM-KVP 498
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD T++ +++ + ++ + L +M +GI+P+ +++NTLI Y R +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML P V T N ++ + + D E+ ++ S G+ P T+ L++ K
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Query: 181 A 181
Sbjct: 619 V 619
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 1/323 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M ++GC + ++ L+ + + G D+A L+ + + CQPDV +++++
Sbjct: 234 QAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY-GCQPDVISHNMI 292
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
++S + LL+ M +G P+ VT+N LI+ + + + L M
Sbjct: 293 LRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 352
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + N ++ F N ID + E S G P I T+NILL + K G +
Sbjct: 353 TPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 412
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S ++++YN VID + G + L M + +KP +T S+V
Sbjct: 413 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 472
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK + ++ I + +N ++ + + + L M +GCKP +
Sbjct: 473 REGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEA 532
Query: 310 TYRTMVRAYSTNGMKNHAKEFQD 332
TY T+++ + G+ A + +
Sbjct: 533 TYTTLIKGITYEGLAEDASKLSN 555
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 41/363 (11%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD----- 58
K + + A ++ + + G + S+ L+S Y +SG ++A +L+ M +P+
Sbjct: 126 KIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYD 185
Query: 59 --------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
C PDV T ++LI + K + L ++M +
Sbjct: 186 AVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK 245
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G +P+ VTYN LI + + E L K+ S C+PDV + N LR+ + G+
Sbjct: 246 GCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDA 305
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K G PS+ TFNIL++ + G K V+E M K+ ++ ++N +I
Sbjct: 306 MKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 365
Query: 213 F--GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
F G+ D + +EYL +M S P VT L+ A GK + +L + +
Sbjct: 366 FCNGKGID-RAIEYL-EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423
Query: 271 LDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +N ++D G+ + E+ LE M +G KPD +T ++V S G A
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVEL---LEEMCYKGLKPDLITCTSVVGGLSREGKVREA 480
Query: 328 KEF 330
+F
Sbjct: 481 MKF 483
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 121/296 (40%), Gaps = 4/296 (1%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
R+G ++ LE+M N PDV + LI+ K ++ + G +
Sbjct: 91 RNGELEEGSRFLEYMTNKGK-SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDV 149
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+YN LI Y ++ E L +M P+ T + L + + G++ + +
Sbjct: 150 TSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGR 206
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ P + T +L+D+ K + + M+ +VTYN++I F + G
Sbjct: 207 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR 266
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L + + + S +P ++ ++R+ G+ +L + + V FN
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
L++ + + VLE+M + G P+ ++ +++ + + A E+ +++
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 36/194 (18%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K ++A E + MV GC + ++ LL+A + G D A +L + ++ C P + +
Sbjct: 370 KGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL-SSKGCSPSLIS 428
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQG-------------------------------- 93
Y+ +I LK + LL +M +G
Sbjct: 429 YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLK 488
Query: 94 ---IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
IRPN YN++I +++ + L M+++ C+P T ++ G +
Sbjct: 489 RFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAE 548
Query: 151 TMEKCYEKFQSAGI 164
K + S G+
Sbjct: 549 DASKLSNELYSRGL 562
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 11/329 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ELF M ++GC+ N SF L+ Y R+G K LL M+ P+ Y+
Sbjct: 73 DDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL-GFSPNKVVYNT 131
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFAEMELTL 121
LI S K D + L+ +M G+ P+ VT+N I A G+ +++F +M++
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V L +P++ T N L F G ++ +EK + + + ++NI L +
Sbjct: 192 VLGLP---QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRI 248
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V++ M + +YNIV+D + G L L RLM S + P VT
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTY 308
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y H GK + +VLR + + N L+ + + +E + +L+ M +
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+G D VT ++ NG + A E
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEI 397
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 150/330 (45%), Gaps = 8/330 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + MV G T +F L+ SG D A L + M C+P+ ++ IL++
Sbjct: 43 LCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEK-GCEPNEYSFGILVRGY 101
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A K LL +M G PN V YNTLI ++ + + E + +M + PDV
Sbjct: 102 CRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDV 161
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI----QPSINTFNILLDSYGKAGHFEKMSA 189
T N + A +SG++ + + Q + QP+I T+N++L + K G E+ A
Sbjct: 162 VTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARA 221
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ E M+ +YNI + R G L + + + + M ++P+ + ++
Sbjct: 222 LFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLC 281
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++R + +S ++ DTV + L+ Y +E VL M + GC P+
Sbjct: 282 KNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNY 341
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T ++ + G + A+E L++KM+E
Sbjct: 342 TCNILLYSLWKEGRISEAEE---LLQKMNE 368
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 145/355 (40%), Gaps = 26/355 (7%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A LF+ M N +S+ L R G +A +L+ M + +
Sbjct: 209 GFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDM-GME 267
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V +Y+I++ K + L+ M++ G+ P+TVTY TL+ Y +E
Sbjct: 268 PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 327
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ + C P+ +T N L + G+I E+ +K G T NI++D
Sbjct: 328 LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCN 387
Query: 181 AGHFEKMSAVMEYMQKYHYSW-----------------------TIVTYNIVIDAFGRAG 217
G +K ++ M + + +++Y+ +I +AG
Sbjct: 388 NGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAG 447
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ + + F M + ++P + ++ GK VL+ ++ +N
Sbjct: 448 RVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYN 507
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
L+ G E+ G+++ M++RG PD Y ++ + G A D
Sbjct: 508 SLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLD 562
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 4/271 (1%)
Query: 57 PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
P+ P + Y++L++SC K D V L DM G+ P T T+N LI + +
Sbjct: 15 PENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDD 74
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM + CEP+ ++ +R + +G + + + G P+ +N L+
Sbjct: 75 ARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLIS 134
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-- 234
S+ K G + +++ M+K S +VT+N I A +G + + +FR M+ + +
Sbjct: 135 SFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLG 194
Query: 235 --KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+P+ +T ++ + G E+ ++ + S+ +++ +N + R+ E
Sbjct: 195 LPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEA 254
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ VL+ M G +P+ +Y ++ NG+
Sbjct: 255 QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGV 285
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 147/360 (40%), Gaps = 42/360 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---------------- 53
+A EL Q M ++G +T + ++ +G DKA ++ M
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417
Query: 54 ------KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
+ C PD+ +YS +I KA + + +M + ++P++ Y+ I +
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477
Query: 108 YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS 167
+ + + L M + C + T N + G+ QI + ++ + G+ P
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537
Query: 168 INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
++ +N +L S + G + +V++ M + S I +++I+I AF +A D ++ +F
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKL--GSVLRFIDNSDIMLDTVF------FNCL 279
+ + +C A E L G V++ + + LD F + L
Sbjct: 598 I---------ALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDL 648
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+D + + + G+L + +G D ++ ++ G K+ A E L EKM E
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADE---LAEKMME 705
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 151/400 (37%), Gaps = 70/400 (17%)
Query: 5 CKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-----NTP 57
CK+ + A +L M +G + +F A +SA SG +A + M+ P
Sbjct: 137 CKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP 196
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQAL-------------------------------- 85
QP++ TY++++ K ++ +AL
Sbjct: 197 --QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEA 254
Query: 86 ---LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
L +M G+ PN +YN ++D + + + + + M S PD T L
Sbjct: 255 QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHG 314
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ ++G++ + G P+ T NILL S K G + +++ M + Y
Sbjct: 315 YCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVID 374
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRS-----------------------ERIKPSCV 239
VT NIVID G L + + M + ++ P +
Sbjct: 375 TVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +++ AG+ + + ++ D+ ++ + ++ + + VL+ M
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+++GC TY +++ G KN E L+++M E
Sbjct: 495 EKKGCNKTLQTYNSLIMGL---GSKNQIFEIYGLIDEMRE 531
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 153/368 (41%), Gaps = 39/368 (10%)
Query: 9 EKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT----------- 56
EK HEL+ + EG C +T +++AL+SA+G+ +D AF L + MK
Sbjct: 211 EKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTT 270
Query: 57 -----------------------PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
C P V TY+ LIK K D +L +M G
Sbjct: 271 ILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDG 330
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTM 152
+P+ V N LI+ GRA + KM S C P+V T N ++A F +
Sbjct: 331 CKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEA 390
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+EK ++ GI PS T+ IL+D + K EK ++E M + + Y +ID+
Sbjct: 391 ALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDS 450
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
GRA + LF+ ++ + S +++ +G+ G+ + + D
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPD 510
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L+ R E ++ M++ GC PD ++ ++ + G A E
Sbjct: 511 VYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIE--- 567
Query: 333 LVEKMDET 340
+ KM E+
Sbjct: 568 MFTKMKES 575
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A+ LF M+ +GC + L++ GR+G + A L M ++ C P
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM-DSLQCAP 368
Query: 62 DVNTYSILIKSCLKAFAFDKVQAL-LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ ++ A AL M GI P++ TY LID + + E L
Sbjct: 369 NVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR-VEKALL 427
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L + G + + + + +++ + + S + +++ +G
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G + +K S + TYN ++ RAG + + L R MR P
Sbjct: 488 NCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIK 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P++ + + S+IM D V +N ++ R F ++ M
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ +G + D +TY +++ A
Sbjct: 608 KLKGFEYDSITYSSILEA 625
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 3/324 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK K KA +F + C+ + L+ G +K L + + +C
Sbjct: 168 ILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCS 227
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI + K +D L +M G+ P Y T++ Y + E L
Sbjct: 228 PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNK-VEAALR 286
Query: 121 LV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV +M + C P V+T ++ G G++D + G +P + N L++ G
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG E + M + +VTYN VI A F + F M++ I PS
Sbjct: 347 RAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+ + + EK +L +D + L+D+ GR K + + +
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
+++ + Y M++ + G
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCG 490
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 6/316 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
++ ++ AL+ SGL D+ + ++ M +P C +S ++K KA +K ++
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSP-CSVGPAEWSEILKILGKAKMVNKALSV 181
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFG 144
+ + P YNTLI ++ ++ SE +C PD T + + AFG
Sbjct: 182 FYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ D + +++ + G+ P+ + +L Y K E ++E M+ + T+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I G+ G + LF M + KP V + +L+ G AG+ E + +
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV-LEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
D+ + V +N ++ A K A + E M+ G P TY ++ +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT-- 419
Query: 324 KNHAKEFQDLVEKMDE 339
N ++ L+E+MDE
Sbjct: 420 -NRVEKALLLLEEMDE 434
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 3/216 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ + GR+ ++ A L + +K +C +
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE--NCGRSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK L + G P+ TYN L+ RA M E +
Sbjct: 476 ARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L +G + + K + + I P ++N +L +AG
Sbjct: 536 NMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAG 595
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
FE + +M M+ + + +TY+ +++A G+ +
Sbjct: 596 MFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 48/293 (16%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE--PDVWTMNCTLRAFGNSGQI 149
Q + ++ TY LI + + EM T+ M+ C P W+ L+ G + +
Sbjct: 118 QHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSE--ILKILGKAKMV 175
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNI 208
+ + + + P+ +N L+ GH EK+ + E + + S +TY+
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235
Query: 209 VIDAFGRAGDLKQMEYLFRL--------------------------------------MR 230
+I AFG+ L++ ++ FRL M+
Sbjct: 236 LISAFGK---LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+ P+ T L++ G G+ + S+ + D V N L++ GR
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ + M C P+ VTY T+++A + K A E EKM +A
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFES--KAPASEAALWFEKMKANGIA 403
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 1/307 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E ++ M++ G + +F+ L++ + GLF A L+ M + C+P++NTY+I
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM-DAKGCKPNLNTYTI 422
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K ++ +L +M T+G NTV YN LI A + E +M S+
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+PD++T N + +++ Y G+ + TFN L+ ++ + G ++
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M +TYN +I A + G +++ LF M + + PS +T L+ +
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGF 602
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AGK +R + + D V +N L++ + E + E +Q G +PD
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662
Query: 309 VTYRTMV 315
+TY T++
Sbjct: 663 ITYNTLI 669
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 42/367 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A L + M GC N+ + L+ A + D+A LLE M C PDVNT+
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF-LMGCPPDVNTF 283
Query: 67 SILI-----------------KSCLKAFA------------------FDKVQALLSDMST 91
+ +I + LK F D+ QALLS +
Sbjct: 284 NTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG 343
Query: 92 QGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
PN V +NTL++ + R ++ KM++ PDV+T + + G
Sbjct: 344 ----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG 399
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+ + + G +P++NT+ IL+D + K G E+ ++ M +S V YN +I
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALI 459
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A + G + + +F M S+ KP T SL+ + E ++ R + ++
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKE 329
++V FN L+ A+ R E ++ M RGC D++TY +++A T ++
Sbjct: 520 ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGL 579
Query: 330 FQDLVEK 336
F++++ K
Sbjct: 580 FEEMIRK 586
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 5/286 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q E+A + + M+ +G NT + AL+SA + G +A + M ++ C+
Sbjct: 426 GFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM-SSKGCK 484
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T++ LI + + AL DM +G+ N+VT+NTLI A+ R E
Sbjct: 485 PDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKL 544
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ML C D T N ++A +G ++ +E+ G+ PSI T NIL++ +
Sbjct: 545 VNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCT 604
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG M M +S IVTYN +I+ + G +++ LF +++E I+P +T
Sbjct: 605 AGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSIT 664
Query: 241 LCSLVRAYGHAGKPEKLGSVL-RFIDNSDIMLDTVFFNCLVDAYGR 285
+L+ G + +L R ++N + D V +N LV +G+
Sbjct: 665 YNTLICWLCREGAFDDACFLLYRGVENGFVPND-VTWNILVYNFGK 709
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 144/381 (37%), Gaps = 67/381 (17%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + L M +EG F ++ YGR+GL +A LL MK C+P
Sbjct: 114 LGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEP 173
Query: 62 DVNTYSIL-----IKSC--------------------------LKAFAF----DKVQALL 86
+Y+++ + +C +KA D LL
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
DM+ G PN++ Y TLIDA + E L +M C PDV T N + F
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293
Query: 147 GQIDTMEKCYEKFQSAGIQ-------------------------------PSINTFNILL 175
++ K ++ G P++ FN L+
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLV 353
Query: 176 DSYGKAGHFEKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ + + G + +A V + M Y + T++ +++ + G L M ++
Sbjct: 354 NGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC 413
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP+ T L+ + G+ E+ G +LR + L+TV +N L+ A + E
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473
Query: 295 VLEVMQQRGCKPDKVTYRTMV 315
+ M +GCKPD T+ +++
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLI 494
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K EK LF+ M+ +G + + L++ + +G A + M + P
Sbjct: 567 LCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR-GFSP 625
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ TY+ LI K + L + +GI+P+++TYNTLI R F + L
Sbjct: 626 DIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLL 685
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+ + P+ T N + FG + Y +F
Sbjct: 686 YRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQFS 724
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 110/312 (35%), Gaps = 44/312 (14%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV- 122
+ Y +LI A F + LL M +GI + ++ YGRA + + L+
Sbjct: 105 SVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLD 164
Query: 123 -----------------------------------KMLSEDCEPDVWTMNCTLRAFGNSG 147
MLS+ P+ +T ++A
Sbjct: 165 MKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVN 224
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D G P+ + L+D+ K ++ ++E M + T+N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
VI F R + + L M + P+ +T L+ + ++ ++L +
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP 344
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKG-VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
++ V FN LV+ + R E V + M G PD T+ T+V G+
Sbjct: 345 NV----VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400
Query: 327 AKEFQDLVEKMD 338
A E LV MD
Sbjct: 401 ALE---LVNDMD 409
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 7/315 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K QP +A+ L MV +GC N ++ AL+ + + D+ LL+ M C+
Sbjct: 109 LCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQR-GCRA 167
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LT 120
DV TY++++ K + D+ LL+ + + N VTYN+L A A+ E L+
Sbjct: 168 DVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEALS 223
Query: 121 LV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L+ KM+ E P+ L + ++D + S G + ++ IL+ ++
Sbjct: 224 LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFA 283
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG ++ M Y T N+VI F +AGDL + LF+ M PS V
Sbjct: 284 NAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNV 343
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ A+ A +P+ +L + +D + + +N ++ ++ R + E +G+ ++M
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMM 403
Query: 300 QQRGCKPDKVTYRTM 314
GC PD+V+Y T+
Sbjct: 404 VDNGCFPDRVSYTTL 418
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y IL++ KA F + LL +M + G+RPN V + T+I A ++ L +
Sbjct: 32 SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF-RR 90
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ EDC P+V+T + + A SGQ + G P++ T+N L+D + K
Sbjct: 91 IGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+++ +++ M + ++TY +++D F + + + +RL+ + K + VT SL
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA---YRLLNALE-KRNVVTYNSL 206
Query: 245 VRAYGHA--GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
A A + + S+L + + V + ++ + E VL M +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
GCK D V+Y+ +V A++ G
Sbjct: 267 GCKTDDVSYKILVVAFANAG 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
++ IL+ + KAG F++ +++ M+ +V + +I AG + Q FR +
Sbjct: 32 SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
E P+ T +LV A +G+P + ++ + + V +N L+D + +L+
Sbjct: 92 -GEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
E+ +L+ M QRGC+ D +TY ++ + N + A + +EK
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEK 197
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
ML K + ++A+++ +M +GC + S+ L+ A+ +G + LL M +
Sbjct: 246 MLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYI- 304
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T +++I KA + L M +G P+ VTYNTLI A+ +A+
Sbjct: 305 LDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKL 364
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ D +P+V T N +++F + + ++ G P ++ L S +
Sbjct: 365 LHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTLKLSKNE 424
Query: 181 AGHFEK 186
A +++
Sbjct: 425 AAIYDQ 430
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
Y+ V+Y I++ F +AG+ +Q L M+S ++P+ V +++R AGK +
Sbjct: 26 YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL 85
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
R I D + ++ LVDA + E G++ M ++GC P+ VTY ++ +
Sbjct: 86 LHFRRI-GEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGF 144
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMK 345
+E++DE + +K
Sbjct: 145 RK-------------LERLDEVLMLLK 158
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 3/321 (0%)
Query: 9 EKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
EK HEL+ M +EG C +T +++AL+SA+ + G D A LL MK+ QP Y+
Sbjct: 207 EKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDN-GMQPTAKIYT 265
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ K L +M Q RP+ TY LI G+A E +M E
Sbjct: 266 MLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRRE 325
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS-YGKAGHFEK 186
C PD MN + G +G++D K +E+ ++ PS+ T+N ++ + + +
Sbjct: 326 GCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSE 385
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+S+ E M+ S + TY+I+ID F + ++ L M + P CSL+
Sbjct: 386 ISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLID 445
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A G A + + + + + + + ++ G+ + + + M + GC P
Sbjct: 446 ALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTP 505
Query: 307 DKVTYRTMVRAYSTNGMKNHA 327
+ Y ++ + GM + A
Sbjct: 506 NVYAYNALMSGLARAGMLDEA 526
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 15/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K KA +F + C ++ +++ G ++K L M N C
Sbjct: 164 MLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCF 223
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P Y L+ + +G +
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGL 283
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM + C PDV+T +R G +G++D + + + G +P N
Sbjct: 284 FEEMR-------HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNN 336
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + E M+ ++VTYN +I A F + ++ F M+
Sbjct: 337 MINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGS 396
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I PS T L+ + + EK +L +D + L+DA G+ K +
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 456
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + +++ Y M++ G + A + D + ++
Sbjct: 457 NELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRL 501
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ F M EGC +T +++ G++G D A L E M+ T C P
Sbjct: 306 LGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEME-TLRCIP 364
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V TY+ +IK+ ++ + ++ + M GI P+ TY+ LID + + E +
Sbjct: 365 SVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNR-TEKAMM 423
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + D + +++ + S + +++ G
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLG 483
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + + M + + + YN ++ RAG L + R M+ P
Sbjct: 484 KAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDIN 543
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ A G P++ +L + S I D V +N ++ A F E +++ M
Sbjct: 544 SYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603
Query: 300 QQRGCKPDKVTYRTMVRA 317
G D +TY +++ A
Sbjct: 604 NAIGFDYDLITYSSILEA 621
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ A G++ +D A L + +K +C
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKE--NCGSSS 471
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK KA D L +M+ G PN YN L+ RA M E T+
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M C PD+ + N L A +G D + + I+P ++N +L + AG
Sbjct: 532 RMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
FE+ + +M+ M + + ++TY+ +++A G+
Sbjct: 592 MFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A +LF M GC N ++ AL+S R+G+ D+A + + M++ C P
Sbjct: 482 LGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDH-GCIP 540
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+N+Y+I++ + K D+ +L +M I+P+ V+YNT++ A A MF E +
Sbjct: 541 DINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLM 600
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+M + + D+ T + L A G Q
Sbjct: 601 KEMNAIGFDYDLITYSSILEAIGKVDQ 627
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 120/279 (43%), Gaps = 6/279 (2%)
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNT-VTYNTLIDAYGRAKMFAEMEL 119
D +TY LI+ CL+ + ++ ++ +M + T + + +I G AKM ++
Sbjct: 118 DTSTYMALIR-CLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVA 176
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDSY 178
++ + C+P N + + G+ + + + Y + + G P T++ L+ ++
Sbjct: 177 IFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAF 236
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + ++ M+ T Y +++ + ++ LF MR + +P
Sbjct: 237 CKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDV 296
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+R G AG+ ++ + + DTV N +++ G+ + + E
Sbjct: 297 FTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEE 356
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M+ C P VTY T+++A + K+ E E+M
Sbjct: 357 METLRCIPSVVTYNTIIKALFES--KSRVSEISSWFERM 393
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 8/332 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q +A E +A+ + + F L+ + G D+A L E+M+++ +
Sbjct: 71 GNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS-RVK 129
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEME 118
P++ TY+ +I K+ +K + LL +M +G + P+ VTYNTLI+A+ RA E
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
KM + PDV T N + G ++ + + + AG P + T+N ++ +
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
AG K+ E ++ S +VT+N ++D F +AG L + + M E I P
Sbjct: 250 CVAG---KVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T LV G+ + +L I + D + + LVD + E +++
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M RGC+ V Y ++V Y G + A+E
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 5/332 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNT 65
P++A +LF+ M ++ ++S +SG +KA LLE M + PD+ T
Sbjct: 112 NPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI + +A + A M GI P+ +T N L+ + E L M
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
PDV T N + A +G++ + E ++ P + TFN LLD + KAG
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKV---VEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLP 288
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ V+E M + + ++TY I+++ R G ++ YL + + P + SLV
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 348
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+G+ E+ +++ + V ++ LV Y R + + +L M
Sbjct: 349 DGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMV 408
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
P TY ++ +G + A DLV +
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 15/314 (4%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 98
RS D A + + DV++Y+ L+ +K+ + + D+ G PN
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
VT+ LI +A A L ++ L E PDV+ N + G D K +E
Sbjct: 63 VTFKILIRGNCKAGQ-AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY--HYSWTIVTYNIVIDAFGR 215
+S+ ++P I T+N ++ K+G+ EK ++E M + + IVTYN +I+AF R
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
A +++ M++ I P +T LV G E+ +L + + + D +
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Query: 276 FNCLVDAYGRLKCFA-EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+N ++ A C A ++ E+++ C PD VT+ T++ + GM A +
Sbjct: 242 YNSIIHAL----CVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRA------L 291
Query: 335 EKMDETCLAMKRPD 348
E ++E C PD
Sbjct: 292 EVLEEMCRENILPD 305
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 4/323 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+ + M C + +F LL + ++G+ +A +LE M + PDV TY+IL
Sbjct: 257 EAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE-NILPDVITYTIL 312
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + LL ++ QG P+ + Y +L+D ++ E + +M C
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
V + + + +G + + + S + P + T+NI+L K G K +
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + Y +VTYN +ID +A +++ L M S P+ VTL S+V
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ + S++ + + V + L+D + + VL+ M+ +G D
Sbjct: 493 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF 552
Query: 310 TYRTMVRAYSTNGMKNHAKEFQD 332
YR ++ + S G A D
Sbjct: 553 AYRKLIVSMSHGGRVAEAMAMYD 575
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 135/335 (40%), Gaps = 7/335 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +A E+ + M E + ++T L++ R G AF LLE +
Sbjct: 280 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ-GYI 338
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ L+ K+ ++ L+ +MS +G R V Y++L+ Y RA +
Sbjct: 339 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+S + P ++T N L G I + G P + T+N L+D K
Sbjct: 399 LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A + + + M VT V+ R G + L M +R P+ V
Sbjct: 459 ANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 518
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ + + + VL + + LD + L+ + AE + + M
Sbjct: 519 YTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMV 578
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
RG PD T +T+ A M N E+ +L E
Sbjct: 579 ARGFLPDGSTSKTLEEA----AMSNSVFEWTNLEE 609
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 4/300 (1%)
Query: 16 QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK 75
+ M G + + + L+S + G ++A +L+ MK PDV TY+ +I +
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV-PDVITYNSIIHALCV 251
Query: 76 AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWT 135
A + +L MS P+ VT+NTL+D + +A M L +M E+ PDV T
Sbjct: 252 AGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
+ GQ+ E+ G P + + L+D K+G E+ +++ M
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
+V Y+ ++ + RAG++ + + M S + P T ++ G
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
K S++ + + D V +N L+D + E + + M RGC P+ VT ++V
Sbjct: 429 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVV 488
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K QP +A+ L MV +GC N ++ AL+ + + D+ LL+ M C+
Sbjct: 109 LCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQR-GCRA 167
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME-LT 120
DV TY++++ K + D+ LL+ + + N VTYN+L A A+ E L+
Sbjct: 168 DVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEALS 223
Query: 121 LV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L+ KM+ E P+ L + ++D + S G + ++ IL+ ++
Sbjct: 224 LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFA 283
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG ++ M Y T N+VI F +AGDL + LF+ M PS V
Sbjct: 284 SAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNV 343
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ A+ A +P+ +L + +D + + +N ++ ++ R + E +G+ ++M
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMM 403
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
GC PD+V+Y T+ + KN A + +K+ +TCL
Sbjct: 404 VDSGCFPDRVSYTTLKIS------KNDAAIYD---QKVHDTCL 437
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y IL++ KA F + LL +M + G+RPN V + T+I A ++ L +
Sbjct: 32 SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF-RR 90
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ EDC P+V+T + + A SGQ + G P++ T+N L+D + K
Sbjct: 91 IGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+++ +++ M + ++TY +++D F + + + +RL+ + K + VT SL
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA---YRLLNALE-KRNVVTYNSL 206
Query: 245 VRAYGHA--GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
A A + + S+L + + V + ++ + E VL M +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
GCK D V+Y+ +V A+++ G
Sbjct: 267 GCKTDDVSYKILVVAFASAG 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N V+Y L+ + +A F + L +M S P+V +R +G++ +
Sbjct: 29 NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKV---SQAL 85
Query: 157 EKFQSAG--IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
F+ G P++ T++IL+D+ K+G + ++ M K S +VTYN +ID F
Sbjct: 86 LHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ L ++ L + M + +T ++ + ++ +L ++ +++
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNS 205
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
F L A G E +LE M Q G +P++V YRT++ N + A +Q L+
Sbjct: 206 LFTALSTAEGDRT--TEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEA--YQVLL 261
Query: 335 EKMDETC 341
+ C
Sbjct: 262 SMYSQGC 268
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
Y+ V+Y I++ F +AG+ +Q L M+S ++P+ V +++R AGK +
Sbjct: 26 YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL 85
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
R I D + ++ LVDA + E G++ M ++GC P+ VTY ++ +
Sbjct: 86 LHFRRI-GEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGF 144
Query: 319 STNGMKNHAKEFQDLVEKMDETCLAMK 345
+E++DE + +K
Sbjct: 145 RK-------------LERLDEVLMLLK 158
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF+ M +G + ++ +L+ YG+ G+ A S+ E MK+ C+PDV TY+
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDA-GCEPDVITYNS 326
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + L M +G++PN VTY+TLIDA+ +A M E V M+
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ +T + A G ++ K + Q AG+ +I T+ LLD + G +
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + K ++ Y + + +A +++ + M + +KP + + +
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E +V+R + + + ++ + L+DAY ++ E +L+ MQ G K
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITV 566
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
VTY ++ G+ A + D
Sbjct: 567 VTYGVLIDGLCKIGLVQQAVRYFD 590
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 1/307 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + F M +S LL +S A S + M P V TY++
Sbjct: 198 EEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV-VAGLSPSVFTYNM 256
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + + ++L +M +G+RP+ VTYN+LID YG+ M +M
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CEPDV T N + F +I + + G+QP++ T++ L+D++ KAG + +
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + TY +IDA + GDL + L M+ + + VT +L+
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + + + L+ + L Y + K + +LE M ++ KPD
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDL 496
Query: 309 VTYRTMV 315
+ Y T +
Sbjct: 497 LLYGTKI 503
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 2/335 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK A +F+ M D GC+ + ++ +L++ + + +AF L MK QP+
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR-GLQPN 355
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS LI + KA + DM G++PN TY +LIDA + E
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ T L G++ E+ + AG + + L Y KA
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK ++E M K + ++ Y I R +++ + R M + +
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ AY GK + ++L+ + + I + V + L+D ++ + + M +
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN 595
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G +P+ + Y ++ N AK F ++++K
Sbjct: 596 GLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK 630
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 133/323 (41%), Gaps = 36/323 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ELF A++ G N Q +T+L Y ++ + +KA +LE M N + +PD+ Y
Sbjct: 444 EAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM-NKKNLKPDLLLYGTK 502
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + A++ +M G+ N+ Y TLIDAY + E V +L E
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEA----VNLLQE-- 556
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
Q GI+ ++ T+ +L+D K G ++
Sbjct: 557 -----------------------------MQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++M + I+ Y +ID + L++ + LF M + I P + SL+
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G P + S+ + + LD + L+ + R K +L+ M ++G PD+V
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707
Query: 310 TYRTMVRAYSTNGMKNHAKEFQD 332
++R Y G N A D
Sbjct: 708 LCICLLRKYYELGDINEALALHD 730
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 30/327 (9%)
Query: 41 GLFDKAFSLLEHM---KNTPDCQPDVNTYSIL--IKSC-------LKAFAFDKVQALLSD 88
G+FD F++L + + C +N + +L ++SC K+ + D
Sbjct: 182 GVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKD 241
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G+ P+ TYN +I R +M ++ PD+ T N + +G G
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY---MQKYHYSWTIVT 205
+ +E+ + AG +P + T+N L++ + K FE++ EY M++ +VT
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQPNVVT 358
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +IDAF +AG L + F M ++P+ T SL+ A G + + +
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418
Query: 266 NSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + L+ V + L+D GR++ E+ G L + G ++ Y ++ Y
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGAL---LKAGWTLNQQIYTSLFHGYIKAK 475
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPDF 349
M A D++E+M++ L +PD
Sbjct: 476 MMEKA---MDILEEMNKKNL---KPDL 496
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 90 STQGI-RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
ST+ + RP ++TL + M E KM P V + N L S +
Sbjct: 172 STRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSK 231
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ AG+ PS+ T+N+++ + G E ++ E M+ IVTYN
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS 291
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID +G+ G L +F M+ +P +T SL+ + + + L +
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + V ++ L+DA+ + E M + G +P++ TY +++ A G N A
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEA 410
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 3/164 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A F M G N +TAL+ ++ ++A +L M +
Sbjct: 575 GLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK-GIS 633
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD Y+ LI +K + +L + M G+ + Y +LI + R +
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
L +ML + PD C LR + G I+ ++ G+
Sbjct: 694 LDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 41/337 (12%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LFQ M + G N FT L+ + R G D A SLL+ MK+ +PDV Y++ I
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCF 280
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTY-------------------------------- 101
KA D +M G+ + VTY
Sbjct: 281 GKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340
Query: 102 ---NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
NT+I YG A F + L + + C P V + NC L G GQ+D K +E+
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ I P+++T+NI++D KAG E V + M+ ++T NI++D +A
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L +F + + +P VT CSL+ G G+ ++ + + +++ + + V +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 279 LVDAYGRLKCFAEMKG--VLEVMQQRGCKPDKVTYRT 313
L+ + KC + G + M + GC PD + T
Sbjct: 520 LIRNF--FKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 1/301 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + EK LFQ + + G + +S+T L+ ++G +A+ L MK C D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ-GCVLDT 619
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ +I K+ +K LL +M T+G P VTY ++ID + E + +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
S+ E +V + + FG G+ID E+ G+ P++ T+N LLD+ KA
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + M+ + +TY+I+I + + ++ M+ + KP+ T +
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ AG + ++ + D+ +N +++ ++ + E + +G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Query: 304 C 304
C
Sbjct: 860 C 860
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E A+ L + +GC + S+ +LS GR G D+A E MK D P+
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK--DAIPN 408
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI---------------------------- 94
++TY+I+I KA + + M G+
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468
Query: 95 -------RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
RP+ VTY +LI+ GR E +ML + P+ +R F G
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-----SWT 202
+ + K Y + G P + N +D KAG EK A+ + ++ + S+T
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588
Query: 203 IV------------------------------TYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+ YN VID F ++G + + L M+++
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+P+ VT S++ + ++ + + I L+ V ++ L+D +G++ E
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
++E + Q+G P+ T+ ++ A
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDA 733
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 147/338 (43%), Gaps = 4/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++A++L++ M+D N +T+L+ + + G + + M C P
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-GCSP 547
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ + + KA +K +AL ++ G P+ +Y LI +A E
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C D N + F SG+++ + E+ ++ G +P++ T+ ++D K
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + E + +V Y+ +ID FG+ G + + + + + + P+ T
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ A A + + + + + + + ++ L+ +++ F + + MQ+
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ TY TM+ + G + E L EK E
Sbjct: 788 QGFKPNVFTYTTMISGLAKAG---NIVEADTLFEKFKE 822
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 124/288 (43%), Gaps = 4/288 (1%)
Query: 47 FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID 106
F E + + C+ N+ +++ K F+ ++ +L +MS G P+ T ++
Sbjct: 117 FRWAERLTDRAHCREAYNSLLMVMARTRK---FNCLEQILEEMSIAGFGPSNNTCIEIVL 173
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
++ +++ E + M P + A S D M +++ Q G
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+++ F L+ + + G + ++++ M+ +V YN+ ID FG+AG + F
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M++ + VT S++ A + + + +D + + +N ++ YG
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
F + +LE +++GC P V+Y ++ G + A K+F+++
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++A+ + + ++ +G N ++ LL A ++ +A + MK+ C P
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK-CTP 757
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSILI K F+K +M QG +PN TY T+I +A E +
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K + D N + N+ + + +E+ + G T +LLDS KA
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA 877
Query: 182 GHFEK---MSAVMEYMQKYHY---SWT 202
E+ + AV+ K + SWT
Sbjct: 878 ECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A+ LF+ +G + N +++L+ +G+ G D+A+ ++E + P
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ-KGLTP 722
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ L+ + +KA + M PN +TY+ LI + + F + +
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +P+V+T + +G I + +EKF+ G +N +++ A
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+ E + S T +++D+ +A ++Q + ++R
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 7/334 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F MV G N Q+F L++ Y G + A +LE M + PD TY+ ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ K ++ LL DM G+ PN VTYN L+ Y + E + M +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N + N+G + + + +S +QP + T+N L+D + G + +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR----LMRSERIKPSCVTLCSLVR 246
ME M+ VT+NI + + ++ E + R L+ P VT +L++
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
AY G ++R + I ++T+ N ++DA + + E +L +RG
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
D+VTY T++ + A E D ++K+ T
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK---AFAFDKVQALL 86
F LSAY G A + + M +P++ T + L+ ++ +F+ + +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGN 145
DM G+ N T+N L++ Y + L +M+SE PD T N L+A
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G++ +++ + G+ P+ T+N L+ Y K G ++ ++E M++ + + T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YNI+I+ AG +++ L M+S +++P VT +L+ G + ++ ++
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 266 NSDIMLDTVFFNCLVDAYGR-LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
N + + V N + + K A + V E++ G PD VTY T+++AY
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 14/342 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L + M ++G AN + L + + ++ + + PD+ TY L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK+ LK ++ +M +GI+ NT+T NT++DA + + E L
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
D T + F +++ + +++ + I P+++TFN L+ G H K
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI---GGLCHHGKTEL 539
Query: 190 VMEYMQKYHYSWTI---VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
ME + S + T+N +I + + G +++ + KP T L+
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 247 AYGHAGKPEKLGSVLRFIDN--SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
G EK L F + + +DTV +N ++ A+ + K E +L M+++G
Sbjct: 600 GLCKEGMTEK---ALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
+PD+ TY + + +G E +L++K +MKR
Sbjct: 657 EPDRFTYNSFISLLMEDG---KLSETDELLKKFSGKFGSMKR 695
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 144/358 (40%), Gaps = 45/358 (12%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
EL M G N ++ L+ Y + G +AF ++E MK T + PD+ TY+ILI
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT-NVLPDLCTYNILING 319
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID-------AYGRAKMFAEMELTLVKM- 124
A + + L+ M + ++P+ VTYNTLID + K+ +ME VK
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 125 -------LSEDCE---------------------PDVWTMNCTLRAFGNSGQIDTMEKCY 156
L C+ PD+ T + ++A+ G + +
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ GI+ + T N +LD+ K ++ ++ K + VTY +I F R
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF 276
+++ ++ M+ +I P+ T SL+ H GK E + S ++ D F
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 277 NCLVDAY---GRL-KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
N ++ Y GR+ K F + + KPD T ++ GM A F
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESI----KHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 123 KMLSEDCEPDVWTMNCTLRA---FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
KM+ +P++ T N L + +S I + + ++ G+ ++ TFN+L++ Y
Sbjct: 156 KMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYC 215
Query: 180 KAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G E ++E M ++ + VTYN ++ A + G L ++ L M+ + P+
Sbjct: 216 LEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR 275
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +LV Y G ++ ++ + ++++ D +N L++ E +++
Sbjct: 276 VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDA 335
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
M+ +PD VTY T++ G+ A++ + +E
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLL-EHMKNTPDCQPDVNTYS 67
E A E F + + G + +F +++ Y + G +KAF E +K++ +PD T +
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS--FKPDNYTCN 595
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
IL+ K +K + + + +TVTYNT+I A+ + K E L +M +
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
EPD +T N + G++ ++ +KF
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 37/261 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++AH L + G + ++ L+ + R +KA + + MK P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV-KITP 519
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+T++ LI + +++ G+ P+ T+N++I Y +
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK----------- 568
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
G+++ + Y + +P T NILL+ K
Sbjct: 569 ------------------------EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G EK + + T VTYN +I AF + LK+ L M + ++P T
Sbjct: 605 GMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 242 CSLVRAYGHAGKPEKLGSVLR 262
S + GK + +L+
Sbjct: 664 NSFISLLMEDGKLSETDELLK 684
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 158/368 (42%), Gaps = 48/368 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS- 67
++A M+ EG + +F LL RS FDKA+ + +K+ + +N YS
Sbjct: 106 DQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS----KVVLNAYSF 161
Query: 68 -ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEME- 118
I+I C +A F +V LL+ + G+ PN V Y TLID + +F +M+
Sbjct: 162 GIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDR 221
Query: 119 LTLV---------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
L LV M P+ + NC + + N G +D
Sbjct: 222 LGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDK 281
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
K + + + GI + T+NIL+ + F + ++ + K S IVTYNI+I+
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD--- 268
F G + LF ++S + P+ VT +L+ Y K E L L + +
Sbjct: 342 GFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY---SKVENLAGALDLVKEMEERC 398
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHA 327
I V + L+DA+ RL + + +M++ G PD TY ++ NG MK +
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458
Query: 328 KEFQDLVE 335
K F+ L E
Sbjct: 459 KPFKSLGE 466
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 3/311 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A LF M G N +++ L++ + + GL + F + E+M N
Sbjct: 202 GCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENM-NRSGIV 260
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ Y+ LI DK + ++M +GI +TYN LI R K F E
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKL 320
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ K+ P++ T N + F + G++DT + + + +S+G+ P++ T+N L+ Y K
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ +++ M++ + + VTY I+IDAF R + + LM + P T
Sbjct: 381 VENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYT 440
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ G ++ + + + ++V +N ++ Y + +L M
Sbjct: 441 YSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500
Query: 301 QRGCKPDKVTY 311
G P+ ++
Sbjct: 501 HSGMVPNVASF 511
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 144/324 (44%), Gaps = 1/324 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
EL + MV C N +F L+S R+GLF++ +L M C PD+ Y+ +I
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH-GCTPDIRMYATIID 305
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K + +L+ M + G++PN V YNTL+ A+ + E E L +M +DC
Sbjct: 306 GICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL 365
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N + F +G +D + + E+ G P + T+ +++ + K G ++ ++
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M ++Y IV+ A E L M + + +T +L+
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ + Y
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVE 335
++ A S G N + D ++
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQ 569
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q E A L A+ N ++ ++ A G A ++L+ M C
Sbjct: 99 GYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR-GCA 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y +++++ + F +L D+ +G + N +++A E
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHL 214
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + S CEPDV + N L+ + + +++ E+ P+I TFN L+ +
Sbjct: 215 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 274
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE++ V+ M ++ + I Y +ID + G L+ + M S +KP+ V
Sbjct: 275 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 334
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++ A + E+ +L + + D LD V FN LVD + + + +LE M
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+RGC PD +TY T++ + G+ + A
Sbjct: 395 ERGCMPDVITYTTVINGFCKEGLIDEA 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL M D+ C + +F L+ + ++GL D+ LLE M C PDV TY+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER-GCMPDVITYTT 407
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K D+ LL M+ G +PNT++Y ++ A+ + + E + +M+ +
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C + T N + G ++ + ++ G P + +++ ++D GKAG ++
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M S + Y+ + A R G + ++ +F
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF---------------------- 565
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
I ++ I D V +N ++ + + L M GC P++
Sbjct: 566 -------------DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
TY ++R ++ G A+E
Sbjct: 613 STYTILIRGLASEGFVKEAQEM 634
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 1/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M GC + +L A R G F A +LE + + C DV ++++
Sbjct: 141 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVL 199
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL D+ + G P+ V+YN ++ AK + ++ + +M+ C
Sbjct: 200 NAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 259
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E +
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 319
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN ++ A ++ E L M + VT LV +
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + M D + + +++ + + E +L+ M GCKP+ ++
Sbjct: 380 NGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439
Query: 311 YRTMVRA 317
Y +++
Sbjct: 440 YTIVLKG 446
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A EL MV++G NT ++++ SA R G +K + +++++T +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDT-TIRS 575
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K ++ L+ M + G PN TY LI E +
Sbjct: 576 DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ--- 632
Query: 122 VKMLSEDC 129
+ML+E C
Sbjct: 633 -EMLTELC 639
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 153/368 (41%), Gaps = 39/368 (10%)
Query: 9 EKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT----------- 56
EK HEL+ + EG C +T +++AL+SA+G+ +D AF L + MK
Sbjct: 211 EKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTT 270
Query: 57 -----------------------PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
C P V TY+ LIK K D +L +M G
Sbjct: 271 ILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDG 330
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA-FGNSGQIDTM 152
+P+ V N LI+ GRA + KM S C P+V T N ++A F +
Sbjct: 331 CKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEA 390
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+EK ++ GI PS T+ IL+D + K EK ++E M + + Y +ID+
Sbjct: 391 ALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDS 450
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
GRA + LF+ ++ + S +++ +G+ G+ + + D
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPD 510
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L+ R E ++ M++ GC PD ++ ++ + G A E
Sbjct: 511 VYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIE--- 567
Query: 333 LVEKMDET 340
+ KM E+
Sbjct: 568 MFTKMKES 575
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A+ LF M+ +GC + L++ GR+G + A L M ++ C P
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM-DSLQCAP 368
Query: 62 DVNTYSILIKSCLKAFAFDKVQAL-LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ ++ A AL M GI P++ TY LID + + E L
Sbjct: 369 NVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR-VEKALL 427
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L + G + + + + +++ + + S + +++ +G
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G + M+K S + TYN ++ RAG + + L R MR P
Sbjct: 488 NCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIK 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P++ + + S+IM D V +N ++ R F ++ M
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ +G + D +TY +++ A
Sbjct: 608 KLKGFEYDSITYSSILEA 625
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 3/324 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK K KA +F + C+ + L+ G +K L + + +C
Sbjct: 168 ILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCS 227
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI + K +D L +M G+ P Y T++ Y + E L
Sbjct: 228 PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNK-VEAALR 286
Query: 121 LV-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV +M + C P V+T ++ G G++D + G +P + N L++ G
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSERIKPSC 238
+AG E + M + +VTYN VI A F + F M++ I PS
Sbjct: 347 RAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+ + + EK +L +D + L+D+ GR K + + +
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
+++ + Y M++ + G
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCG 490
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 6/316 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
++ ++ AL+ SGL D+ + ++ M +P C +S ++K KA +K ++
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSP-CSVGPAEWSEILKILGKAKMVNKALSV 181
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFG 144
+ + P YNTLI ++ ++ SE +C PD T + + AFG
Sbjct: 182 FYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ D + +++ + G+ P+ + +L Y K E ++E M+ + T+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I G+ G + LF M + KP V + +L+ G AG+ E + +
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV-LEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
D+ + V +N ++ A K A + E M+ G P TY ++ +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT-- 419
Query: 324 KNHAKEFQDLVEKMDE 339
N ++ L+E+MDE
Sbjct: 420 -NRVEKALLLLEEMDE 434
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+ + GR+ ++ A L + +K +C +
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE--NCGRSS 475
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK L +M G P+ TYN L+ RA M E +
Sbjct: 476 ARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMR 535
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L +G + + K + + I P ++N +L +AG
Sbjct: 536 NMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAG 595
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
FE + +M M+ + + +TY+ +++A G+ +
Sbjct: 596 MFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 48/293 (16%)
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE--PDVWTMNCTLRAFGNSGQI 149
Q + ++ TY LI + + EM T+ M+ C P W+ L+ G + +
Sbjct: 118 QHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSE--ILKILGKAKMV 175
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM-EYMQKYHYSWTIVTYNI 208
+ + + + P+ +N L+ GH EK+ + E + + S +TY+
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235
Query: 209 VIDAFGRAGDLKQMEYLFRL--------------------------------------MR 230
+I AFG+ L++ ++ FRL M+
Sbjct: 236 LISAFGK---LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
+ P+ T L++ G G+ + S+ + D V N L++ GR
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ + M C P+ VTY T+++A + K A E EKM +A
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFES--KAPASEAALWFEKMKANGIA 403
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 152/318 (47%), Gaps = 3/318 (0%)
Query: 14 LFQA-MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+FQ+ M G +NT + +++ Y + ++A L MK +P TY+IL+ +
Sbjct: 364 IFQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEK-GLKPTKVTYNILMDA 422
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEP 131
+ + V++LL +M G +PN +YN LI AYGR K +E E ++M +
Sbjct: 423 YSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKA 482
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ + A+ SGQ + Y + G++PS+ T+ LLD + +AG+ EK+
Sbjct: 483 TSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETW 542
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M T VT+++V+D + G Q + + P+ +T L+ AY
Sbjct: 543 KSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKG 602
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ KL +L+ + ++ D+V ++ L+ AY R++ F+ + M + G PD +Y
Sbjct: 603 GQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSY 662
Query: 312 RTMVRAYSTNGMKNHAKE 329
R ++ + + K+
Sbjct: 663 RKLLNTLDVKSARENIKD 680
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 40/372 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++ E+ ++ E + A +S G +D A+ + E M+ + Q
Sbjct: 246 VLGRARMADEILEILGSLPPERGFREAVLYNAAMSGVAYCGRYDDAWKIFESMEKN-NVQ 304
Query: 61 PDVNTYSILI--------------------------------KSCLKAFAFD--KVQALL 86
PD T SI++ S +K F + K +AL+
Sbjct: 305 PDHVTSSIMLLVMKRRKASAKDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALI 364
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
S+M +GI NT YNT+++ Y + E E +M + +P T N + A+
Sbjct: 365 FQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYS 424
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTI 203
Q + +E + G QP+ ++N L+ +YG+ EK M+K T
Sbjct: 425 RRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATS 484
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+Y +I A+ +G ++ + M+ E +KPS T +L+ + AG EKL +
Sbjct: 485 SSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKS 544
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + V F+ ++D + F + + V+ + G P +TY ++ AY+ G
Sbjct: 545 MTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGG- 603
Query: 324 KNHAKEFQDLVE 335
H K Q L E
Sbjct: 604 -QHYKLPQLLKE 614
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 133/356 (37%), Gaps = 57/356 (16%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLF-DKAFSLLEHMKNTPDCQPDVNTYSIL 69
A E A A+ F L+ Y R L D+ L+ M L
Sbjct: 166 AMEEILAFARSPVAADGPGFAGFLAGYSRGALGEDECVELMRRMGEEG-----------L 214
Query: 70 IKSCLKAFAFDK-VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
CL F + + V+ L +S Q T+ + GRA+M E+ L + E
Sbjct: 215 GLGCLHLFRWMRAVEELPISLSLQ-------TWLVALVVLGRARMADEILEILGSLPPER 267
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ N + G+ D K +E + +QP T +I+L + K S
Sbjct: 268 GFREAVLYNAAMSGVAYCGRYDDAWKIFESMEKNNVQPDHVTSSIMLLVMKRRKASAKDS 327
Query: 189 -AVMEYMQKYHYSWTI-----------------------------------VTYNIVIDA 212
+ M + W++ YN +++
Sbjct: 328 WKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMGKRGIPSNTSIYNTIMNV 387
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ + +++ E LF M+ + +KP+ VT L+ AY +PE + S+L + + +
Sbjct: 388 YCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPN 447
Query: 273 TVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+NCL+ AYGR K +E + M++ G K +Y +++ AY+ +G A
Sbjct: 448 ARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKA 503
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 3/327 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L + M +A+ +T ++ A + A +L M N +
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIR 271
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI+ + LLSDM + I PN VT++ LIDA+ + E E
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ +PD++T + + F ++D + +E S P++ T+N L+ + K
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A E+ + M + VTYN +I +AGD + +F+ M S+ + P +T
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK EK V ++ S + D +N +++ + + + +
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G KP+ + Y TM+ + G+K A
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEA 538
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 36/315 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K A LF M ++G N ++ +L+ G + A LL M P+V T
Sbjct: 253 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVT 311
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+S LI + +K + + L +M + I P+ TY++LI+ + E + M+
Sbjct: 312 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 371
Query: 126 SEDCEPDVWTMNCTLRAF----------------------GNS-------------GQID 150
S+DC P+V T N ++ F GN+ G D
Sbjct: 372 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 431
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+K ++K S G+ P I T++ILLD K G EK V EY+QK I TYNI+I
Sbjct: 432 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 491
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ +AG ++ LF + + +KP+ + +++ + G E+ ++ R + +
Sbjct: 492 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 551
Query: 271 LDTVFFNCLVDAYGR 285
++ +N L+ A R
Sbjct: 552 PNSGTYNTLIRARLR 566
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A +LF MV + F LLSA + FD SL E M+N D+ +Y+I
Sbjct: 46 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNI 104
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G P+ VT ++L++ Y K +E + +M +
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T N + + ++ + G QP + T+ +++ K G +
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M+K +V Y +IDA ++ LF M ++ I+P+ VT SL+R
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V F+ L+DA+ + E + + + M +R PD
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +++ + + + AK +L+ D
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKD 374
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 1/310 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ +A L M NT +F L+ +A +L++ M CQPD+ T
Sbjct: 148 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFT 206
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++ K D +LL M I + V Y T+IDA K + +M
Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 266
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ P+V T N +R N G+ + I P++ TF+ L+D++ K G
Sbjct: 267 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 326
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + M K I TY+ +I+ F L + +++F LM S+ P+ VT +L+
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + A + E+ + R + ++ +TV +N L+ + + + + M G
Sbjct: 387 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 446
Query: 306 PDKVTYRTMV 315
PD +TY ++
Sbjct: 447 PDIITYSILL 456
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ D + ++++L++ + D+A + E M + DC P+V TY+ L
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTL 385
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK KA ++ L +MS +G+ NTVTYNTLI +A + KM+S+
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE---- 185
PD+ T + L G+++ +E Q + ++P I T+NI+++ KAG E
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505
Query: 186 -------------------------------KMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ A+ M++ TYN +I A
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
R GD L + MRS T+ S+V H G+ EK
Sbjct: 566 RDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEK 606
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ E+ ELF+ M G NT ++ L+ ++G D A + + M + PD+
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDI 449
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAE 116
TYSIL+ K +K + + + P+ TYN +I+ +A +F
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ L VK P+V + F G + + + + + G P+ T+N L+
Sbjct: 510 LSLKGVK-------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 562
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + G + +++ M+ + T ++VI+
Sbjct: 563 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 3/327 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L + M +A+ +T ++ A + A +L M N +
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN-KGIR 287
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI+ + LLSDM + I PN VT++ LIDA+ + E E
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ +PD++T + + F ++D + +E S P++ T+N L+ + K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A E+ + M + VTYN +I +AGD + +F+ M S+ + P +T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK EK V ++ S + D +N +++ + + + +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G KP+ + Y TM+ + G+K A
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 36/315 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K A LF M ++G N ++ +L+ G + A LL M P+V T
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVT 327
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+S LI + +K + + L +M + I P+ TY++LI+ + E + M+
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 126 SEDCEPDVWTMNCTLRAF----------------------GNS-------------GQID 150
S+DC P+V T N ++ F GN+ G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+K ++K S G+ P I T++ILLD K G EK V EY+QK I TYNI+I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ +AG ++ LF + + +KP+ + +++ + G E+ ++ R + +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 271 LDTVFFNCLVDAYGR 285
++ +N L+ A R
Sbjct: 568 PNSGTYNTLIRARLR 582
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A +LF MV + F LLSA + FD SL E M+N D+ +Y+I
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNI 120
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G P+ VT ++L++ Y K +E + +M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T N + + ++ + G QP + T+ +++ K G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M+K +V Y +IDA ++ LF M ++ I+P+ VT SL+R
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V F+ L+DA+ + E + + + M +R PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +++ + + + AK +L+ D
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ D + ++++L++ + D+A + E M + DC P+V TY+ L
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTL 401
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK KA ++ L +MS +G+ NTVTYNTLI +A + KM+S+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE---- 185
PD+ T + L G+++ +E Q + ++P I T+NI+++ KAG E
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 186 -------------------------------KMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ A+ M++ TYN +I A
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
R GD L + MRS T+ S+V H G+ EK
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEK 622
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ E+ ELF+ M G NT ++ L+ ++G D A + + M + PD+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDI 465
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAE 116
TYSIL+ K +K + + + P+ TYN +I+ +A +F
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ L VK P+V + F G + + + + + G P+ T+N L+
Sbjct: 526 LSLKGVK-------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + G + +++ M+ + T ++VI+
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 6/319 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E + + G N S+T L+ AY + G + KA +L + + +PD+ +Y
Sbjct: 358 KEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGE-KPDLVSYGA 416
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I + D + M +G+ P+ YN L+ + F M+L L +ML +
Sbjct: 417 FIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRN 476
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PDV+ + F +G++D K ++ G+ P I +N ++ + K G
Sbjct: 477 VQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDAL 536
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M+ H++ TY+ VID + + D+ +F M + KP+ +T SL+ +
Sbjct: 537 SCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGF 596
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ V R + + D++ + V + LV + + + + E+M GC P+
Sbjct: 597 CKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPND 656
Query: 309 VTYRTMVRAYSTNGMKNHA 327
T+ Y NG+ N A
Sbjct: 657 ATFH-----YLINGLTNTA 670
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 1/315 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + E +L M G + N + F ++ A + GL KA + M C PD+
Sbjct: 283 KAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEM-GCGPDI 341
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ +I K + L +G+ PN +Y L+ AY + + + L +
Sbjct: 342 TTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFR 401
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ +PD+ + + G+ID EK G+ P +N+L+ K G
Sbjct: 402 IAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGR 461
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
F M ++ M + + + ++D F R G+L + +F+++ + + P V +
Sbjct: 462 FPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNA 521
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ + GK S L + N D ++ ++D Y + + + M +
Sbjct: 522 MIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK 581
Query: 304 CKPDKVTYRTMVRAY 318
KP+ +TY +++ +
Sbjct: 582 FKPNVITYTSLINGF 596
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 4/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK E+ L + +GC + + ++ Y + G A L+ +K P
Sbjct: 214 LGKI---EEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELK-MKGVLP 269
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY LI KA F+ V LL++M+ +G+ N +N +IDA + + + T+
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETM 329
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C PD+ T N + G+I ++ EK + G+ P+ ++ L+ +Y K
Sbjct: 330 RRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQ 389
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + K + ++ + + +V+Y I G++ + M + + P
Sbjct: 390 GDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIY 449
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G+ + +L + + ++ D F L+D + R E + +V+ +
Sbjct: 450 NVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIR 509
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
+G P V Y M++ + G
Sbjct: 510 KGVDPGIVGYNAMIKGFCKFG 530
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 10/290 (3%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C D +S L+K F +++ +L +M Q ++P ++ LI AYG + +
Sbjct: 87 CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSL-DRA 145
Query: 119 LTLVKMLSE--DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF----QSAGIQPSINTFN 172
L L + E +C P V N L SG++D + Y+K G T +
Sbjct: 146 LQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTS 205
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I++ G E+ +++ +V YN++ID + + GDL+ + ++ +
Sbjct: 206 IVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMK 265
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+ P+ T +L+ + AG+ E + +L + + ++ FN ++DA + +
Sbjct: 266 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKA 325
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ M + GC PD TY TM+ G A EF +EK E L
Sbjct: 326 AETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEF---LEKAKERGL 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 18/295 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ ++ +G D + A++ + + G A S L MKN PD TYS
Sbjct: 498 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHA-PDEYTYST 556
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +K + M +PN +TY +LI+ + + E M S D
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD 616
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG--------- 179
P+V T + F +G+ + +E G P+ TF+ L++
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLI 676
Query: 180 --KAGHFEKMSAVMEY---MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
K + S ++++ M + I YN VI + G + + L M ++
Sbjct: 677 EEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGF 736
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRL 286
V +++ H GK ++ +++ N + V ++ +D Y GRL
Sbjct: 737 LIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRL 791
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 163/343 (47%), Gaps = 11/343 (3%)
Query: 2 LGKCKQPEKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
L K + E+A ++F++M C N ++T +++ + G D+A LL+ M T C
Sbjct: 110 LVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET-GCC 168
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TYS+L++ KA DK LL +M+ +G +P+ + YNTL++ +++ E L
Sbjct: 169 PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE-ALE 227
Query: 121 LVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+ M+ C P V T N + F S Q+D + + G P + +N ++
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR------AGDLKQMEYLFRLMRSER 233
+ + A+++ M ++TY+ +ID + L+ + +M+
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ T ++ A K ++ ++LR + +S+++ D F+ ++ + +
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ +M +R CKP+ V Y ++ S G + A + F+ +VE
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 146/316 (46%), Gaps = 5/316 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + Q +A +LF+ +E C N ++ +L+ ++G D+A+ LL+ M++
Sbjct: 7 LLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIP 62
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V ++ +I+ KA F ++ P+ +T+N L+DA ++ E
Sbjct: 63 PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 121 LVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M S C P+V T + G++D + + G P++ T+++L++
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG +K +++ M + + ++ YN +++ ++ L + L +LM P+ V
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ + + + ++ +++ + D + +N ++ R + + +L+ M
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Query: 300 QQRGCKPDKVTYRTMV 315
C PD +TY T++
Sbjct: 303 VAARCVPDVITYSTII 318
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 8/308 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ ++A L Q M + GC + ++ +++ R D A +LL+ M C PDV
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV-AARCVPDV 311
Query: 64 NTYSILIKSCLKAFAFD---KVQA---LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
TYS +I K + D K++A +L M G PN TY +I+ RA+ +
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +M+ + PD+ + + + + S +D K + +P+ + L+D
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G +K V E M + + + TYN V+D G +++ + M + P
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+ +L+R E+ + + ++ ++ +N LV+ + K ++ GV
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 298 VMQQRGCK 305
+ + G K
Sbjct: 551 KLIEAGYK 558
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ ++A L + M+D + SF+ ++ + +S D A+ + M +C+P
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKP 420
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y+ LI K DK + ++ + RP TYN+++D E +
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA---GIQPSINTFNILLDSY 178
M+ ++C PD + +R ++ +E+ YE FQ+ G + +N+L++
Sbjct: 480 EGMIHKECFPDGASYGALIRGL---CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 179 GKAGHFEKMSAVMEYMQKYHY 199
K V + + Y
Sbjct: 537 CKKKRLSDAHGVANKLIEAGY 557
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I +AG L Q L MR I P ++R AG+ + +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG-CKPDKVTYRTMVRAYSTNGM 323
+ D + FN LVDA + E + E M C P+ VTY T++ +G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 324 KNHAKEFQDLVEKMDET 340
+ A E DL M+ET
Sbjct: 152 LDRAIELLDL---MNET 165
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 141/336 (41%), Gaps = 4/336 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q A EL + M + + ++ ++ + G D AF+L M+ + D+
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADI 282
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ LI+ A +D LL DM + I P+ V ++ LID + + E E +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PD T + F Q+D + S G P+I TFNIL++ Y KA
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + M VTYN +I F G L+ + LF+ M S R++P V+
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ G+PEK + I+ S + LD +N ++ + + + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KPD TY M+ G + A L KM+E
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADL---LFRKMEE 555
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL + M+ G +T ++T+L+ + + DKA +L+ M + C P++ T++IL
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV-SKGCGPNIRTFNIL 393
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLS 126
I KA D L MS +G+ +TVTYNTLI + G+ ++ E+ +M+S
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL---FQEMVS 450
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD+ + L ++G+ + + +EK + + ++ I +NI++ A +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + + TYNI+I + G L + + LFR M + P+ T L+R
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY--GRLK 287
A+ G K ++ I +D +VD GRLK
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLK 613
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 1/328 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A +LFQ M F+ L S R+ +D L + M+ ++ T
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTL 110
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
SI+I C + + + + G P+TVT++TLI+ +E + +M+
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+P + T+N + +G++ ++ G QP+ T+ +L K+G
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M++ V Y+I+ID + G L LF M + K + +L+R
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ +AG+ + +LR + I D V F+ L+D + + E + + + M QRG P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
D VTY +++ + + A DL+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLM 378
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 137/322 (42%), Gaps = 3/322 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A LF M +G A+ +T L+ + +G +D LL M
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-IT 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +S LI +K + + L +M +GI P+TVTY +LID + + +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M+S+ C P++ T N + + + ID + + K G+ T+N L+ + +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E + + M IV+Y I++D G+ ++ +F + +++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ +A K + + + + D +N ++ + +E + M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+ G P+ TY ++RA+ G
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEG 576
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 139/334 (41%), Gaps = 15/334 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL MV+ G + AL++ +G A L++ M T QP+ TY +
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPV 218
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLV 122
+K K+ LL M + I+ + V Y+ +ID + +F EME+
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K D+ +R F +G+ D K I P + F+ L+D + K G
Sbjct: 279 K-------ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + S VTY +ID F + L + ++ LM S+ P+ T
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y A + + R + ++ DTV +N L+ + L K + + M R
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+PD V+Y+ ++ NG A E + +EK
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ELFQ MV + S+ LL +G +KA + E ++ + + D+ Y+I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK-MELDIGIYNI 497
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A D L + +G++P+ TYN +I + +E +L KM +
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
P+ T N +RA G K E+ + G +T +++D
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 163/343 (47%), Gaps = 11/343 (3%)
Query: 2 LGKCKQPEKAHELFQAM-VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
L K + E+A ++F++M C N ++T +++ + G D+A LL+ M T C
Sbjct: 110 LVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET-GCC 168
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TYS+L++ KA DK LL +M+ +G +P+ + YNTL++ +++ E L
Sbjct: 169 PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE-ALE 227
Query: 121 LVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+ M+ C P V T N + F S Q+D + + G P + +N ++
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR------AGDLKQMEYLFRLMRSER 233
+ + A+++ M ++TY+ +ID + L+ + +M+
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
P+ T ++ A K ++ ++LR + +S+++ D F+ ++ + +
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ +M +R CKP+ V Y ++ S G + A + F+ +VE
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 146/316 (46%), Gaps = 5/316 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + Q +A +LF+ +E C N ++ +L+ ++G D+A+ LL+ M++
Sbjct: 7 LLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIP 62
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V ++ +IK KA F ++ P+ +T+N L+DA ++ E
Sbjct: 63 PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 121 LVKM-LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M S C P+V T + G++D + + G P++ T+++L++
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG +K +++ M + + ++ YN +++ ++ L + L +LM P+ V
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ + + + ++ +++ + D + +N ++ R + + +L+ M
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Query: 300 QQRGCKPDKVTYRTMV 315
C PD +TY T++
Sbjct: 303 VAARCVPDVITYSTII 318
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 8/308 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ KQ ++A L Q M + GC + ++ +++ R D A +LL+ M C PDV
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV-AARCVPDV 311
Query: 64 NTYSILIKSCLKAFAFD---KVQA---LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
TYS +I K + D K++A +L M G PN TY +I+ RA+ +
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +M+ + PD+ + + + + S +D K + +P+ + L+D
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G +K V E M + + + TYN V+D G +++ + M + P
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+ +L+R E+ + + ++ ++ +N LV+ + K ++ GV
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 298 VMQQRGCK 305
+ + G K
Sbjct: 551 KLIEAGYK 558
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ ++A L + M+D + SF+ ++ + +S D A+ + M +C+P
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKP 420
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y+ LI K DK + ++ + RP TYN+++D E +
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA---GIQPSINTFNILLDSY 178
M+ ++C PD + +R ++ +E+ YE FQ+ G + +N+L++
Sbjct: 480 EGMIHKECFPDGASYGALIRGL---CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 179 GKAGHFEKMSAVMEYMQKYHY 199
K V + + Y
Sbjct: 537 CKKKRLSDAHGVANKLIEAGY 557
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY +I +AG L Q L MR I P +++ AG+ + +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG-CKPDKVTYRTMVRAYSTNGM 323
+ D + FN LVDA + E + E M C P+ VTY T++ +G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 324 KNHAKEFQDLVEKMDET 340
+ A E DL M+ET
Sbjct: 152 LDRAIELLDL---MNET 165
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 140/336 (41%), Gaps = 4/336 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q A EL + M + + ++ ++ + G D AF+L M+ + D+
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADI 282
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ LI+ A +D LL DM + I P+ V ++ LID + + E E +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PD T + F Q+D + S G P+I TFNIL++ Y KA
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + M VTYN +I F G L+ + LF+ M S R++P V+
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ G+PEK + I+ S + LD +N ++ + + + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KPD TY M+ G E L KM+E
Sbjct: 523 VKPDVKTYNIMIGGLCKKG---SLSEADLLFRKMEE 555
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 39/345 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL + M+ G +T ++T+L+ + + DKA +L+ M + C P++ T++IL
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV-SKGCGPNIRTFNIL 393
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLS 126
I KA D L MS +G+ +TVTYNTLI + G+ ++ E+ +M+S
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL---FQEMVS 450
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD+ + L ++G+ + + +EK + + ++ I +NI++ A +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + + TYNI+I + G L + + LFR M + P+ T L+R
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 247 AY---GHAGKPEKL------------GSVLRF-IDNSDIML------DTVFFNCLVDAYG 284
A+ G A K KL S LRF + ML D F L+ +
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPF- 629
Query: 285 RLKCFAEMKGVLEV------MQQRGCKPDKVTYRTMVRAYSTNGM 323
C E V + M+ G KP+ VTY T+++ M
Sbjct: 630 ---CLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNM 671
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 1/328 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A +LFQ M F+ L S R+ +D L + M+ ++ T
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTL 110
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
SI+I C + + + + G P+TVT++TLI+ +E + +M+
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+P + T+N + +G++ ++ G QP+ T+ +L K+G
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M++ V Y+I+ID + G L LF M + K + +L+R
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ +AG+ + +LR + I D V F+ L+D + + E + + + M QRG P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
D VTY +++ + + A DL+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLM 378
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 137/322 (42%), Gaps = 3/322 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A LF M +G A+ +T L+ + +G +D LL M
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-IT 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +S LI +K + + L +M +GI P+TVTY +LID + + +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M+S+ C P++ T N + + + ID + + K G+ T+N L+ + +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E + + M IV+Y I++D G+ ++ +F + +++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ +A K + + + + D +N ++ + +E + M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+ G P+ TY ++RA+ G
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEG 576
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 139/334 (41%), Gaps = 15/334 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL MV+ G + AL++ +G A L++ M T QP+ TY +
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPV 218
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLV 122
+K K+ LL M + I+ + V Y+ +ID + +F EME+
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K D+ +R F +G+ D K I P + F+ L+D + K G
Sbjct: 279 K-------ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + S VTY +ID F + L + ++ LM S+ P+ T
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y A + + R + ++ DTV +N L+ + L K + + M R
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+PD V+Y+ ++ NG A E + +EK
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 101/256 (39%), Gaps = 25/256 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ELFQ MV + S+ LL +G +KA + E ++ + + D+ Y+I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK-MELDIGIYNI 497
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A D L + +G++P+ TYN +I + +E +L KM +
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG---KAGH-- 183
P+ T N +RA G K E+ + G +T L + KAGH
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617
Query: 184 -------------FEKMSAV------MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
E+ ++V + M+ Y +VTYN VI + Q+
Sbjct: 618 DVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPG 677
Query: 225 LFRLMRSERIKPSCVT 240
+ M +P+ VT
Sbjct: 678 VLDQMFERGCQPNAVT 693
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 18 MVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M+ G + + +FT LL + + ++D A +L ++MK +P+V TY+ +IK L
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYD-APTLFKNMK-AMGYKPNVVTYNTVIKGLL 667
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+V +L M +G +PN VT +T I + + L L KM E+ DV
Sbjct: 668 NGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM--ENDNEDVT 725
Query: 135 T 135
T
Sbjct: 726 T 726
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 151/345 (43%), Gaps = 6/345 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVN 64
+ E L M + C + S+ ++ + +A +++ M K C PDV
Sbjct: 174 RTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 233
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+++ +I K K L ++M +G+ P+ TYN+++DA +A+ + E L +M
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ + EPD T N + + SG K + K S G+ P TF+ + S K G
Sbjct: 294 VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + +YM + IV+Y+I++ + G M LF M + I +C + L
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ A+ G ++ V + + + V ++ L+ A+ R+ A+ M G
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+P+ Y +++ + +G AKEF + E M + + RP+
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEF--ISEMMSK---GLHRPNI 513
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 2/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + + MVD+G + + ++ A++ Y SG + ++ + M + P
Sbjct: 277 LCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM-TSKGLIP 335
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T+S + S K + + M+T+G P+ V+Y+ L+ Y FA+M
Sbjct: 336 DTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLF 395
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + + +N + A G +D + + Q G++P++ T++ L+ ++ +
Sbjct: 396 HSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRM 455
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVT 240
G M Y+ +I F GDL K E++ +M +P+ V
Sbjct: 456 GRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVF 515
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ + G+ V + + V FN L+D Y + + GVL+ M
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 575
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
G +PD VT T+V Y +G
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSG 597
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 2/338 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A E+FQ M +G + S++ LL Y G F +L M +
Sbjct: 347 LCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK-GIVS 405
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ + +ILI + K D+ + ++M QG+RPN VTY+TLI A+ R A+
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSYGK 180
+M+S EP+ + + F G + ++ + S G+ +P+I F+ ++ S
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G V + TIVT+N +ID + G +++ + M S I+P VT
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV Y +GK + + R + + + TV +N ++D R + K + M
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
G D TY+ +++ N + + A + MD
Sbjct: 646 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 2/307 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+ LF +M D+G +N L+SA+ + G+ D+A + M+ +P+V TYS LI
Sbjct: 392 NNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ-GVRPNVVTYSTLIS 450
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE- 130
+ + S M + GI PNT Y++LI + + + + +M+S+
Sbjct: 451 AFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHR 510
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ + + + G++ + + G +P+I TFN L+D Y G EK V
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 570
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M +VT N ++ + ++G + LFR M +++KP+ VT ++
Sbjct: 571 LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLR 630
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ + + +S +D + L+ R E + + CK D
Sbjct: 631 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 690
Query: 311 YRTMVRA 317
TM+ A
Sbjct: 691 LNTMINA 697
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 129/313 (41%), Gaps = 2/313 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E F M+ G + NT + +L+ + G KA + M + +P++ +S +I
Sbjct: 461 AMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520
Query: 71 KS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
S C++ D Q + + + G RP VT+N+LID Y + L M+S
Sbjct: 521 HSLCIEGRVMD-AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 579
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EPDV T N + + SG+ID + + ++P+ T+NI+LD +AG
Sbjct: 580 EPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK 639
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M + I TY I++ R + LF + + K L +++ A
Sbjct: 640 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALY 699
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ E+ + I S ++ + + ++ + E + M++ GC P
Sbjct: 700 KVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759
Query: 310 TYRTMVRAYSTNG 322
++R G
Sbjct: 760 LLNDIIRMLLQKG 772
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 1/262 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F ++ G +F +L+ Y G +KAF +L+ M + +PDV T + L+
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTNNTLV 590
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ D L +M + ++P TVTYN ++D RA + + +M+
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
D+ T L+ + D + K + + I N ++++ K E+ + +
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + TY ++I + G +++ + +F M PS L ++R
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 770
Query: 251 AGKPEKLGSVLRFIDNSDIMLD 272
G K G + +D + I L+
Sbjct: 771 KGDIVKAGYYMSKVDGTIISLE 792
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 2/187 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + A ++F M+D G + ++ LL R+ L D+A +L H DC+
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF-HKLGAMDCKF 686
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ + +I + K ++ L + +ST G+ PN TY +I + E +
Sbjct: 687 DITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMF 746
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M C P +N +R G I K I +T ++L+ +
Sbjct: 747 SSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSK 806
Query: 182 G-HFEKM 187
G H E++
Sbjct: 807 GKHREQI 813
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A +LF M +G + ++ +L+S G + A LL M P
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ LI + K + + L +M + I PN VTYN+LI+ + E +
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 122 VKMLSEDCEPDVWTMNCTLRAF----------------------GNS------------- 146
M+S+DC PDV T N ++ F GN+
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G D +K ++K S G+ P I T++ILLD K G EK V EY+QK I TY
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTY 504
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
NI+I+ +AG ++ LF + + +KP+ + +++ + G E+ ++ R +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564
Query: 267 SDIMLDTVFFNCLVDAYGR 285
+ D+ +N L+ A R
Sbjct: 565 DGTLPDSGCYNTLIRARLR 583
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 1/310 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ +A L MV+ G +T +F L+ +A +L++ M CQPD+ T
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFT 223
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++ K D +LL M I N V YNT+ID + K + KM
Sbjct: 224 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKME 283
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ +PDV+T N + N G+ + I P++ TFN L+D++ K G
Sbjct: 284 TKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLI 343
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + M + IVTYN +I+ F L + + +F LM S+ P VT +L+
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + A + E+ + R + ++ +TV +N L+ + + + + M G
Sbjct: 404 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 463
Query: 306 PDKVTYRTMV 315
PD +TY ++
Sbjct: 464 PDIITYSILL 473
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 13/322 (4%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +A L MV GC + ++ +++ + G D A SLL+ M+ + +V Y
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEANVVIY 259
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELTLVK 123
+ +I K D L + M T+GI+P+ TYN+LI YGR +++ L
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR---WSDASRLLSD 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ P+V T N + AF G++ EK +++ I P+I T+N L++ +
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M +VTYN +I F +A +++ LFR M + + VT +
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQ 300
L++ AG + + + + + + D + ++ L+D YG+L+ + V E +Q
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE---KALVVFEYLQ 493
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+ +P+ TY M+ G
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAG 515
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N + TYSI
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYSI 121
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + A+L M G P+ VT ++L++ Y K +E + +M+
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T N + + ++ + G QP + T+ +++ K G +
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M+K +V YN +ID + + LF M ++ IKP T SL+
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V FN L+DA+ + E + + + M QR P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
VTY +++ + + + A++ L+ D
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ MV +G + +++ LL + G +KA + E+++ + +P++ TY+I+I
Sbjct: 450 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPNIYTYNIMI 508
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L +S +G++PN + Y T+I + R + E + +M +
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 568
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
PD N +RA G + ++ +S G +T +++++
Sbjct: 569 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 144/324 (44%), Gaps = 1/324 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
EL + MV C N +F L+S R+GLF++ +L M C PD+ Y+ +I
Sbjct: 284 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH-GCTPDIRMYATIID 342
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K + +L+ M + G++PN V YNTL+ A+ + E E L +M +DC
Sbjct: 343 GICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL 402
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N + F +G +D + + E+ G P + T+ +++ + K G ++ ++
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M ++Y IV+ A E L M + + +T +L+
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ + Y
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 582
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVE 335
++ A S G N + D ++
Sbjct: 583 SSIASALSREGRINKVIQMFDNIQ 606
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 145/327 (44%), Gaps = 6/327 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q E A L A+ N ++ ++ A G A ++L+ M C
Sbjct: 136 GYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR-GCA 191
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y +++++ + F +L D+ +G + N +++A E
Sbjct: 192 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHL 251
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + S CEPDV + N L+ + + +++ E+ P+I TFN L+ +
Sbjct: 252 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 311
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE++ V+ M ++ + I Y +ID + G L+ + M S +KP+ V
Sbjct: 312 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 371
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++ A + E+ +L + + D LD V FN LVD + + + +LE M
Sbjct: 372 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 431
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ GC PD +TY T++ + G+ + A
Sbjct: 432 EHGCMPDVITYTTVINGFCKEGLIDEA 458
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL M D+ C + +F L+ + ++GL D+ LLE M C PDV TY+
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH-GCMPDVITYTT 444
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K D+ LL M+ G +PNT++Y ++ A+ + + E + +M+ +
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C + T N + G ++ + ++ G P + +++ ++D GKAG ++
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M S + Y+ + A R G + ++ +F
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF---------------------- 602
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
I ++ I D V +N ++ + + L M GC P++
Sbjct: 603 -------------DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
TY ++R ++ G A+E
Sbjct: 650 STYTILIRGLASEGFVKEAQEM 671
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 1/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M GC + +L A R G F A +LE + + C DV ++++
Sbjct: 178 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVL 236
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + D+ LL D+ + G P+ V+YN ++ AK + ++ + +M+ C
Sbjct: 237 NAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 296
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH E +
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN ++ A ++ E L M + VT LV +
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 416
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + M D + + +++ + + E +L+ M GCKP+ ++
Sbjct: 417 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 476
Query: 311 YRTMVRA 317
Y +++
Sbjct: 477 YTIVLKG 483
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A EL MV++G NT ++++ SA R G +K + +++++T +
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDT-TIRS 612
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K ++ L+ M + G PN TY LI E +
Sbjct: 613 DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ--- 669
Query: 122 VKMLSEDC 129
+ML+E C
Sbjct: 670 -EMLTELC 676
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 140/340 (41%), Gaps = 52/340 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A F M GC N ++TALL AY +S +A + M + C P+ TYS
Sbjct: 504 EQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA-CYPNAVTYSA 562
Query: 69 LIKSCLKAFAFDKV----QALL-------SDMSTQG-----IRPNTVTYNTLIDAYGRAK 112
LI KA K + L+ SD +G I PN VTY LID +A+
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
++ L ML+ CEP+ + + F G+ID ++ + + G PS++T+
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYT 682
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D K G + V+ M + +VTY +ID + G++++ L LM +
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEK 742
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +L+ G GK + LK F +
Sbjct: 743 GCSPNVVTYTALIDGLGKTGKAD----------------------------ASLKLFKQ- 773
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
M +GC P+ VTYR ++ G+ + A D
Sbjct: 774 ------MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLD 807
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 145/348 (41%), Gaps = 18/348 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---------- 53
K KQ +AH++F MVD C N +++AL+ ++G KA + E +
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593
Query: 54 -----KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+T P+V TY LI KA LL M G PN + Y+ LID +
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ + ++M P V T + G++D K + + P++
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ ++D K G EK ++ M++ S +VTY +ID G+ G LF+
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ 773
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M S+ P+ VT L+ AG ++ +L + ++ ++C V + K
Sbjct: 774 MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFS--KK 831
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVE 335
F G+LE M+ P Y ++ ++S G A E ++LVE
Sbjct: 832 FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 18/325 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ AHEL AM+ GC+ N + AL+ + + G D A + M P
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC-GYLP 676
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+TY+ LI K D +LS+M PN VTY +ID + E L L
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI-EKALNL 735
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ++ E C P+V T + G +G+ D K +++ S G P+ T+ +L++
Sbjct: 736 LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-----GDLKQMEYLFRLMRSERIK 235
AG ++ +++ M+ H+ + Y+ + F + G L++ME S
Sbjct: 796 AGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEME-------SHETV 848
Query: 236 PSCVTLCSLVRAYGHAGKPE---KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P L+ ++ AG+ E +L L + +S M T + L+ A E
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
+ M ++G PD + + ++V+
Sbjct: 909 FTLYTEMTRKGIVPDLIVFVSLVKG 933
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 29/346 (8%)
Query: 13 ELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
++++ M+ C NT +F+ L G+ F+KAF +L+ M PD +TY+ +
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGK---FEKAFQILKEMMRK-GFVPDTSTYTKV 458
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +A +K L +M G+ P+ TY LID++ +A + + +M S C
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGC 518
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T L A+ S Q+ + + A P+ T++ L+D KAG +K
Sbjct: 519 SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578
Query: 190 VMEYM--------QKYHY--------SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
V E + +++ + +VTY +ID +A + L M +
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFA 290
+P+ + +L+ + GK + V + + + L+D GRL
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD--L 696
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
MK VL M C P+ VTY M+ S G A L+E+
Sbjct: 697 AMK-VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 134/370 (36%), Gaps = 45/370 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q E + + M G + + A + G + A ++LE D
Sbjct: 213 VLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEK----EDFN 268
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D + +I ++A F++ + L M PN VTY TL+ + + K F +
Sbjct: 269 LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRI 328
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI------- 173
+ M++E C P+ N + + N+G K + + + G P +NI
Sbjct: 329 INMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICG 388
Query: 174 --------LLDSYGK--------------------------AGHFEKMSAVMEYMQKYHY 199
LLD K G FEK +++ M + +
Sbjct: 389 QEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGF 448
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
TY VI +A +++ LF+ M+ + P T L+ ++ AG E+ S
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + + V + L+ AY + K + + M C P+ VTY ++
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568
Query: 320 TNGMKNHAKE 329
G A E
Sbjct: 569 KAGEIQKACE 578
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 3/222 (1%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
Y+ L + G E L ++ +D E +N +R G D + + +
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
G +PS T+N L+ AG E V + M + T A + G
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
++ E V ++ A + S L + + + + V + L+
Sbjct: 257 DA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLL 313
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + K F K ++ +M GC P+ + ++V Y G
Sbjct: 314 SGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 152/358 (42%), Gaps = 39/358 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK K+ +A++LF+ M G +T +TAL+ ++G +A S+ + M + C P
Sbjct: 66 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM-TSHGCVP 124
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELT 120
DV T S +I KA + M +G+ PN V Y+ LI +A KM +E+
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM- 183
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PD T N + SG ++ +++ AG +P + T+NIL+ + K
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 181 AGH------------------------------------FEKMSAVMEYMQKYHYSWTIV 204
AG+ E+ A+ME + + TI
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN +++ + G L++ L R + P VT SL+ G + + + + +
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ LDTV + L+ + + V + M GC PD VT TM+ S G
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 2/327 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A F M++ GC + ++ L+S + ++G D A L C
Sbjct: 205 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCT 264
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D++TY+ ++ K ++ AL+ ++ G P TYN L++ + E
Sbjct: 265 IDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 324
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L K++ C PDV T + G + K +++ G+ + L+ +
Sbjct: 325 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQ 384
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + S+V + M + +VT + +ID +AG + +F+ M + + P+ V
Sbjct: 385 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 444
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A K + +L + + DT+ +N L+D + + + M
Sbjct: 445 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 504
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ GCKPD TY ++ + G + A
Sbjct: 505 EAGCKPDVYTYNILISGFCKAGNTDAA 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 144/335 (42%), Gaps = 6/335 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A L + + GC ++ ALL+ + G ++A LL + + C PDV TY+
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVVTYTS 61
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K + L +M+ +G+ +TV Y LI + + M S
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T++ + +G+I + ++ ++ G+ P+ ++ L+ KA +
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K + +TYN++ID ++GD++ F M KP T L+ +
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 249 GHAGKPEKLG-SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AG + S+ + + +D + +VD + K E ++E + GC P
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM-DETC 341
TY ++ G +E DL+ K+ D C
Sbjct: 302 IATYNALLNGLCKMG---RLEEAIDLLRKIVDNGC 333
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 1/302 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ E+A L + + GC ++ ALL+ + G ++A LL + + C P
Sbjct: 277 LAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTP 335
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ LI K + L +M+ +G+ +TV Y LI + +
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M S C PDV T++ + +G+I + ++ ++ G+ P+ ++ L+ KA
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ ++ M+K + +TYNI+ID ++GD++ F M KP T
Sbjct: 456 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 515
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ + AG + V + +S + V + L+ + + + + M++
Sbjct: 516 NILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575
Query: 302 RG 303
RG
Sbjct: 576 RG 577
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 146/351 (41%), Gaps = 14/351 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ + A E+ M C +T ++ L+ +SG + A + + M C+P
Sbjct: 171 LCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEA-GCKP 229
Query: 62 DVNTYSILIKSCLKAFAFDKV-QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ILI KA D +L + + G + TY ++D + K E
Sbjct: 230 DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ K+ + C P + T N L G+++ K G P + T+ L+D GK
Sbjct: 290 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 349
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M + V Y +I + G + Q +++ M S P VT
Sbjct: 350 EKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT 409
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLE 297
L +++ AG+ + + ++ + + V ++ L+ ++ C EM L
Sbjct: 410 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM---LA 466
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
M++ C PD +TY ++ +G A+ F D E ++ C +PD
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD--EMLEAGC----KPD 511
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 152/318 (47%), Gaps = 3/318 (0%)
Query: 14 LFQA-MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+FQ+ M G +NT + +++ Y + ++A L MK +P TY+IL+ +
Sbjct: 364 IFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEK-GLKPTKVTYNILMDA 422
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEP 131
+ + V++LL +M G +PN +YN LI AYGR K +E E ++M +
Sbjct: 423 YSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKA 482
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ + A+ SGQ + Y + G++PS+ T+ LLD + +AG+ EK+
Sbjct: 483 TSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETW 542
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M T VT+++V+D + G Q + + P+ +T L+ AY
Sbjct: 543 KSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKG 602
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ KL +L+ + ++ D+V ++ L+ AY R++ F+ + M + G PD +Y
Sbjct: 603 GQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSY 662
Query: 312 RTMVRAYSTNGMKNHAKE 329
R ++ + + K+
Sbjct: 663 RKLLNTLDVKSARENIKD 680
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 40/372 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++ E+ ++ E + A +S G +D A+ + E M+ + Q
Sbjct: 246 VLGRARMADEILEILGSLPPERGFREAVLYNAAMSGVAYCGRYDDAWKIFESMEKN-NVQ 304
Query: 61 PDVNTYSILI--------------------------------KSCLKAFAFD--KVQALL 86
PD T SI++ S +K F + K +AL+
Sbjct: 305 PDHVTSSIMLLVMKRRKASAKDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALI 364
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
S+M +GI NT YNT+++ Y + E E +M + +P T N + A+
Sbjct: 365 FQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYS 424
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTI 203
Q + +E + G QP+ ++N L+ +YG+ EK M+K T
Sbjct: 425 RRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATS 484
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+Y +I A+ +G ++ + M+ E +KPS T +L+ + AG EKL +
Sbjct: 485 SSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKS 544
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + V F+ ++D + F + + V+ + G P +TY ++ AY+ G
Sbjct: 545 MTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGG- 603
Query: 324 KNHAKEFQDLVE 335
H K Q L E
Sbjct: 604 -QHYKLPQLLKE 614
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 120/301 (39%), Gaps = 36/301 (11%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
Q++ L GR+ + D+ +L + + V Y+ + +D +
Sbjct: 238 QTWLVALVVLGRARMADEILEILGSLPPERGFREAV-LYNAAMSGVAYCGRYDDAWKIFE 296
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M ++P+ VT + ++ R K A+ D W
Sbjct: 297 SMEKNNVQPDHVTSSIMLLVMKRRKASAK---------------DSW------------- 328
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
K +++ G++ S+ L+ + G ++ M+K YN
Sbjct: 329 ------KFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYN 382
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+++ + + +++ E LF M+ + +KP+ VT L+ AY +PE + S+L + +
Sbjct: 383 TIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDL 442
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ +NCL+ AYGR K +E + M++ G K +Y +++ AY+ +G
Sbjct: 443 GFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEK 502
Query: 327 A 327
A
Sbjct: 503 A 503
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 165/367 (44%), Gaps = 38/367 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ + Q ++A LF M + C + + +L+ A+ R+G + A +++E M
Sbjct: 20 LYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAA-IP 78
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMF 114
P TY+ +I +C A + K L M+ G+ P+ VT+N ++ A Y +A +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 115 AEM----------------------------ELTLVKMLSE---DCEPDVWTMNCTLRAF 143
E+ + L + E C PDV T + ++
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
GQ++ + ++ + G++P+I +N LL +Y G + A+ ++K I
Sbjct: 199 CIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V+Y +++A+GR+ ++ +F M+ KP+ V+ +L+ AYG AG ++ +L
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
++ I D V + L+ A GR + ++ +LE + RG + V Y + +++Y + G
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378
Query: 324 KNHAKEF 330
A E
Sbjct: 379 YEKALEL 385
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
A + ++ Y R D+A L M+ C+PD + Y+ LI + +A +
Sbjct: 9 ARNDIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAIN 67
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ DM I P TYN +I+A G A + + KM PD+ T N L A
Sbjct: 68 IMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALK 127
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
N Q +E + A + T NI++ K G + + M++
Sbjct: 128 NGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPD 187
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTY ++ ++ G ++ + +F LM +E +KP+ V SL+ AY G + ++
Sbjct: 188 VVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFN 247
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I + + D V + L++AYGR + + V M++ CKP+KV+Y ++ AY + G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPD 348
M KE L+ +M++ + +PD
Sbjct: 308 M---LKEAVGLLHEMEKDGI---QPD 327
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 10/339 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G +KA EL + M + G + + +LSA + KA S E MK + D
Sbjct: 92 GAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGA-NVTSD 150
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELT 120
T +I+I +K + L + M + + P+ VTY +++ +Y +
Sbjct: 151 TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAI 210
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++E +P++ N L A+ + G + + G++P I ++ LL++YG+
Sbjct: 211 FDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGR 270
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ EK V M+K V+YN +IDA+G AG LK+ L M + I+P V+
Sbjct: 271 SAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVS 330
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV-- 298
+ +L+ A G + ++ ++L + I L+TV +N + +Y F + + LE+
Sbjct: 331 ISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY---LSFGDYEKALELYT 387
Query: 299 -MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
M++ KPD VTY ++ S G + + F+D+V+
Sbjct: 388 SMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVD 426
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E +F MV EG N ++ +LL AY G+ +A ++ +K +PD+ +Y
Sbjct: 203 QVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN-GLRPDIVSY 261
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ + ++ +K + + + M +PN V+YN LIDAYG A M E L +M
Sbjct: 262 TSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK 321
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +PDV +++ L A G QI +E E +S GI + +N + SY G +EK
Sbjct: 322 DGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEK 381
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ M++ + VTYNI+I + G + F M ++ +
Sbjct: 382 ALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST 432
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
MKN + + Y ++I+ + D+ + L +M +P+ YN+LI A+ RA
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG 60
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ + ML P T N + A G +G + +K G+ P + T N
Sbjct: 61 QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHN 120
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+L + + K + E M+ + + T NI+I + G + LF MR
Sbjct: 121 IVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRER 180
Query: 233 RIK--PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
R K P VT S++ +Y G+ E ++ + + + V +N L+ AY
Sbjct: 181 RTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHR 240
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
E + ++++ G +PD V+Y +++ AY + A+E + ++K
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ QPEKA E+F M C N S+ AL+ AYG +G+ +A LL M+ QPD
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK-DGIQPD 327
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL- 121
V + S L+ +C + +++ +L ++GI NTV YN+ I +Y F + E L
Sbjct: 328 VVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY---LSFGDYEKALE 384
Query: 122 --VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS---INTFNILLD 176
M + +PD T N + G+ + +E + + + + T L +
Sbjct: 385 LYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEFLWTIRWLEE 444
Query: 177 SYGKAGH--------FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
S G ++ S ++EY+ S ++ T N V++ G+ G + M LF
Sbjct: 445 SLGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYK 504
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
M + T ++R GK K VL+++++S +
Sbjct: 505 MVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGV 545
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 12/347 (3%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A +F MV EGCD N+ +++ L++ G D+A +LE M
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-G 340
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V TY++ I + ++ L++ M +G RPN TY LI R ++E
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 397
Query: 119 LTL---VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + KML E P+ T N + G+ T K + + G + T+N ++
Sbjct: 398 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 457
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
G EK + E M K T+VTYN +I+ + G++ L LM+ +
Sbjct: 458 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P T LV + GK E + + + + V + L+D + + +
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
LE M++ GC P+ +Y ++ S +N E + + +KM E L
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSK---ENRFSEAEKICDKMAEQGL 621
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 4/311 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++T+L+ + R+ D AF + + M C P+ TYS LI D+ +L +
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +GI P TY I A + E + +M C P+V T + G+
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ Y K G+ P+ T+N L++ G F + +M+ + TYN
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I GD+++ LF M P+ VT +L+ Y G +L + +
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N LV + + + M + G P+ V+Y T++ +S +G + A
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA- 574
Query: 329 EFQDLVEKMDE 339
L+E+M+E
Sbjct: 575 --LSLLERMEE 583
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 3/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A ++F M G ANTQ++ ++ G +KA L E M K P P V TY+ L
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP--LPTVVTYNTL 491
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I L + LL M G P+ TYN L+ + + +M+
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + + G++D E+ + G P++ ++N +++ K F +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M + ++TY +ID R G + +F M + P+ T SL+
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ +L+ ++ + D V F L+D + L +L M GCKP+
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731
Query: 310 TYRTMVRA 317
TY +++
Sbjct: 732 TYSVLLKG 739
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 30/295 (10%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C++ ++A L + M +G + +FT+L+ + G D AF LL M + C+
Sbjct: 669 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV-GCK 727
Query: 61 PDVNTYSILIKS----CL--------------------KAFAFDKVQALLSDMSTQGIRP 96
P+ TYS+L+K CL K F+ V LL+ MS G P
Sbjct: 728 PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEP 787
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
TY+TL+ R F E E + M PD L A + ++D K +
Sbjct: 788 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 847
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
++ G Q ++ + L+ + KAG E+ A+ + M + ++ + + +++D +
Sbjct: 848 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 907
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK---PEKLGSVLRFIDNSD 268
G+L L +M S+ P+ T L R GK E L L+ + +S+
Sbjct: 908 GELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 962
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 35/287 (12%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L M GI+P+ +T+NTLI+ + E EL L ++ D PDV+T +
Sbjct: 227 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 286
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ +D +++ G P+ T++ L++ G ++ ++E M + T+
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY + I A ++ L M+ +P+ T +L+ GK E + +
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406
Query: 265 DNSDIMLDTVFFNCLVDAY---GR----LKCFAEMKG----------------------- 294
++ +TV +N L++ GR LK F M+G
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466
Query: 295 -----VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ E M + G P VTY T++ Y T G N+A DL+++
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 139/373 (37%), Gaps = 60/373 (16%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A FQ MV+ G + N S+T L+ + + G D A SLLE M+ C P+V +Y+
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM-GCNPNVESYNA 595
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT---------------------------- 100
+I K F + + + M+ QG+ PN +T
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655
Query: 101 -------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
Y++LI + E E+ L +M + PD T + F G+ID
Sbjct: 656 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715
Query: 154 KCYEKFQSAGIQPSINTFNILL------------------------DSYGKAGHFEKMSA 189
+ G +P+ T+++LL + K +FE +S
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M + T+ TY+ ++ R G + E L + M+ P SL+ A+
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 835
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ + + I+ L + L+ A + E + + + M ++ D++
Sbjct: 836 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 895
Query: 310 TYRTMVRAYSTNG 322
+ +V G
Sbjct: 896 VWTVLVDGLLKEG 908
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%)
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+++ N L ++ Y++ ++GIQPS+ TFN L++ K G + ++
Sbjct: 205 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 264
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
+ +Y S + TY +I R +L +F M E P+ VT +L+ + G
Sbjct: 265 QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 324
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++ +L + I + + A ++ E ++ M++RGC+P+ TY
Sbjct: 325 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 384
Query: 313 TMVRAYSTNG 322
++ S G
Sbjct: 385 ALISGLSRLG 394
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/297 (17%), Positives = 112/297 (37%), Gaps = 16/297 (5%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N F ++L+ R D+ F+ +H++ ++IK+C +V
Sbjct: 149 NMNCFISMLNRLVR----DRVFAPADHIR------------ILMIKACRNEEEIRRVADF 192
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L+++S G + + NTL+ + +M +ML+ +P + T N +
Sbjct: 193 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 252
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G++ E + + P + T+ L+ + + + + V + M K VT
Sbjct: 253 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVT 312
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +I+ G + + + M + I+P+ T + A E+ ++ +
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 372
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + L+ RL G+ M + G P+ VTY ++ G
Sbjct: 373 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ +++ + N ++ + ++ L++ M + I+PS +T +L+ GK +
Sbjct: 201 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 260
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L I D+ D + L+ + R + GV + M + GC P+ VTY T++
Sbjct: 261 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI--- 317
Query: 319 STNGMKNHAK--EFQDLVEKMDE 339
NG+ N + E D++E+M E
Sbjct: 318 --NGLCNEGRVDEALDMLEEMIE 338
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 25/352 (7%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M C N ++ ++S RSG ++AF E M + PD
Sbjct: 255 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY-GLSPDA 313
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY L+ K + +ALL +MS G++PN V Y TL+D + + AE L +
Sbjct: 314 FTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKE 373
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS----YG 179
M+S +P+ + +R GQ+ K ++ G++P T+N L+ +
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHD 433
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G FE ++ M+ + +Y I+I+ + G+ K+ L M SE +KP+
Sbjct: 434 KDGAFE----LLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ + G L + +++ D +N L+ + E + +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549
Query: 300 QQRGCKPDKVTYRTMVRAYS----------------TNGMKNHAKEFQDLVE 335
Q+RG PD+ TY ++ Y +G+K +A + DL+E
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 151/334 (45%), Gaps = 3/334 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q +A +L + M+ G +T ++ L+ + + D AF LL M+N+
Sbjct: 392 GLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS-GIL 450
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V +Y I+I + + LL +M ++G++PN Y LI + + +
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM + PD++ N ++ G+++ E+ Y + Q G+ P T++ L+ Y K
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ EK ++ M TY +++ + ++ D +++ + + M KP
Sbjct: 571 TGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHI 630
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++R + E VL ++ + ++ D ++ L+ ++ + G+L+ M
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ G +P V Y ++ + +G + A+ D +
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 37/287 (12%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTP 57
G CK EKA +L + M++ G N ++T LL Y +S ++K S+L+ M + P
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKP 626
Query: 58 DCQ-------------------------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D PD++ YS LI K +K LL
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+M+ +G+ P V YN LID + R+ + +L++ P+ T + +
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKN 746
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G I Y++ GI P +N+L A E+ + E M Y+ + +
Sbjct: 747 GDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLF 805
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
N ++ F + G L++ E L +M I P+ T+ +V +G AGK
Sbjct: 806 NTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGK 852
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 36/279 (12%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
G C+ E +A L + M+ EG N + L+ + + G A LE M P
Sbjct: 462 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHP 521
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
D PD TYS LI K +K LL
Sbjct: 522 DLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLL 581
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G++PN TY L++ Y ++ + ++ L ML +PD +R S
Sbjct: 582 RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 641
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
++ + + G+ P ++ ++ L+ K EK +++ M K IV Y
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
N +ID F R+GD+ + +F + ++ + P+CVT +L+
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 142/350 (40%), Gaps = 44/350 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + MVD G + ++ AL++ + +A +LL+ M + +P++ Y
Sbjct: 295 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM-SCSGLKPNIVVYGT 353
Query: 69 LIKSCLK----AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ +K A AFD +L +M + G++PN + Y+ LI + L +M
Sbjct: 354 LVDGFMKEGKTAEAFD----ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD-------- 176
+ PD +T N ++ D + + +++GI P++ ++ I+++
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469
Query: 177 ---------------------------SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ K G+ +E M K + + YN +
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I G +++ E + ++ + P T L+ Y G EK +LR + NS +
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + L++ Y + + ++ +L+ M G KPD Y ++R S
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 639
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 4/264 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS I++ KA FD + + +M + N VTYN +I R+ E
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ PD +T + ++ + ++ +G++P+I + L+D + K
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + +++ M + Y+ +I + G L + L + M ++P T
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420
Query: 241 LCSLVRAYGHAGKPEKLGS--VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L++ GH + +K G+ +L + NS I+ + + +++ + E +LE
Sbjct: 421 YNPLMQ--GHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M G KP+ Y ++ +S G
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEG 502
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+D ++ P+T + L+D Y + ++ M P N L+ +
Sbjct: 162 TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA 221
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
++ + K + AGI P + T++ ++++ KA F+ V E M++ + VTY
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N++I R+G +++ M + P T +L+ + ++ ++L +
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S + + V + LVD + + AE +L+ M G +P+K+ Y ++R G
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR 401
Query: 327 AKEFQDLVEKMDETCLAMKRPD 348
A + L+++M + L RPD
Sbjct: 402 ASK---LLKEMIKVGL---RPD 417
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 117/286 (40%), Gaps = 2/286 (0%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A +H +P P +L+ + K + ++ M+ G+ P N L
Sbjct: 157 RAIQDTDHRSRSP--SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGL 214
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+ RA + M PDV+T + + A + D +K +E+ +
Sbjct: 215 LKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+ T+N+++ ++G E+ E M Y S TY +++ + LK+ +
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
L M +KP+ V +LV + GK + +L+ + ++ + + + ++ L+
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ +L+ M + G +PD TY +++ + K+ A E
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFEL 440
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 41/337 (12%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LFQ M + G N FT L+ + R G D A SLL+ MK+ +PDV Y++ I
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCF 280
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTY-------------------------------- 101
KA D +M G+ + VTY
Sbjct: 281 GKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340
Query: 102 ---NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
NT+I YG A F + L + + C P V + NC L G GQ+D K +E+
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ I P+++T+NI++D KAG E V + M+ ++T NI++D +A
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L +F + + +P VT CSL+ G G+ ++ + + +++ + + V +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 279 LVDAYGRLKCFAEMKG--VLEVMQQRGCKPDKVTYRT 313
L+ + KC + G + M + GC PD + T
Sbjct: 520 LIRNF--FKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 1/301 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + EK LFQ + + G + +S+T L+ ++G +A+ L MK C D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ-GCVLDT 619
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ +I K+ +K LL +M T+G P VTY ++ID + E + +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
S+ E +V + + FG G+ID E+ G+ P++ T+N LLD+ KA
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + M+ + +TY+I+I + + ++ M+ + KP+ T +
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ AG + ++ + D+ +N +++ ++ + E + +G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Query: 304 C 304
C
Sbjct: 860 C 860
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E A+ L + +GC + S+ +LS GR G D+A E MK D P+
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK--DAIPN 408
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGI---------------------------- 94
++TY+I+I KA + + M G+
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468
Query: 95 -------RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
RP+ VTY +LI+ GR E +ML + P+ +R F G
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-----SWT 202
+ + K Y + G P + N +D KAG EK A+ + ++ + S+T
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588
Query: 203 IV------------------------------TYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+ YN VID F ++G + + L M+++
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+P+ VT S++ + ++ + + I L+ V ++ L+D +G++ E
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
++E + Q+G P+ T+ ++ A
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDA 733
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 147/338 (43%), Gaps = 4/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + ++A++L++ M+D N +T+L+ + + G + + M C P
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-GCSP 547
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ + + KA +K +AL ++ G P+ +Y LI +A E
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C D N + F SG+++ + E+ ++ G +P++ T+ ++D K
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + E + +V Y+ +ID FG+ G + + + + + + P+ T
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ A A + + + + + + + ++ L+ +++ F + + MQ+
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+G KP+ TY TM+ + G + E L EK E
Sbjct: 788 QGFKPNVFTYTTMISGLAKAG---NIVEADTLFEKFKE 822
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 124/288 (43%), Gaps = 4/288 (1%)
Query: 47 FSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID 106
F E + + C+ N+ +++ K F+ ++ +L +MS G P+ T ++
Sbjct: 117 FRWAERLTDRAHCREAYNSLLMVMARTRK---FNCLEQILEEMSIAGFGPSNNTCIEIVL 173
Query: 107 AYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
++ +++ E + M P + A S D M +++ Q G
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+++ F L+ + + G + ++++ M+ +V YN+ ID FG+AG + F
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M++ + VT S++ A + + + +D + + +N ++ YG
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
F + +LE +++GC P V+Y ++ G + A K+F+++
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++A+ + + ++ +G N ++ LL A ++ +A + MK+ C P
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK-CTP 757
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSILI K F+K +M QG +PN TY T+I +A E +
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
K + D N + N+ + + +E+ + G T +LLDS KA
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA 877
Query: 182 GHFEK---MSAVMEYMQKYHY---SWT 202
E+ + AV+ K + SWT
Sbjct: 878 ECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A+ LF+ +G + N +++L+ +G+ G D+A+ ++E + P
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ-KGLTP 722
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++ L+ + +KA + M PN +TY+ LI + + F + +
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + +P+V+T + +G I + +EKF+ G +N +++ A
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
+ E + S T +++D+ +A ++Q + ++R
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 3/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A LF M G + +T LL+ Y +SG +KA L++ MK+ C P V TY+ LI
Sbjct: 221 AIRLFDEMKANGLHPTAKIYTTLLAIYFKSG-DEKALGLVQEMKDK-GCAPTVFTYTELI 278
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K K+ + ++ +M G +P+ V N LI+ +G+A + +M S C
Sbjct: 279 KGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCA 338
Query: 131 PDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T N ++A F + +EK ++ G+ PS T++IL+D + K EK
Sbjct: 339 PNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALL 398
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++E M + + Y +I+A G+A + LF ++ + S +++ G
Sbjct: 399 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLG 458
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+P + + + D +N L+ R E L M++ GC PD
Sbjct: 459 KCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLN 518
Query: 310 TYRTMVRAYSTNGMKNHAKE 329
++ ++ + G A E
Sbjct: 519 SHNIILNGLARTGRPEQATE 538
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 4/339 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK K KA +F + C ++ +++ + G +K L M N DC
Sbjct: 140 ILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCF 199
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS+L+ + +K D L +M G+ P Y TL+ Y ++ E L
Sbjct: 200 PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSG--DEKALG 257
Query: 121 LVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV+ M + C P V+T ++ G SG+++ + G +P + N L++ +G
Sbjct: 258 LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFG 317
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSERIKPSC 238
KAG E + + M+ + +VTYN VI A F + F M++ + PS
Sbjct: 318 KAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSS 377
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+ + + EK +L +D + L++A G+ K + +
Sbjct: 378 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLE 437
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+++ + Y M++ G + A + + ++K+
Sbjct: 438 LKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKI 476
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E A+ +F M+ +GC + L++ +G++G + A L + M++ C P
Sbjct: 281 LGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSL-KCAP 339
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ ++ A + + M G+ P++ TY+ LID + + E L
Sbjct: 340 NVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNR-VEKALL 398
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + + + + + + + S + +++ + G
Sbjct: 399 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLG 458
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K + + YN ++ RAG +++ R M P
Sbjct: 459 KCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLN 518
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G+PE+ + + +S I D V +N ++ + R F E ++ M
Sbjct: 519 SHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREM 578
Query: 300 QQRGCKPDKVTYRTMVRA 317
RG + D +TY +++ A
Sbjct: 579 GSRGFEYDHITYSSILEA 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 143/313 (45%), Gaps = 6/313 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L+ GLF + + +++ M +P C S ++K KA +K ++
Sbjct: 97 TYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQ 156
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSG 147
+ ++ +P TYN++I + ++ +M +E DC PD T + + AF G
Sbjct: 157 IKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLG 216
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ D + +++ ++ G+ P+ + LL Y K+G EK +++ M+ + T+ TY
Sbjct: 217 RDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYT 275
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I G++G ++ +F M + KP V + +L+ +G AG+ E + + +
Sbjct: 276 ELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSL 335
Query: 268 DIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ V +N ++ A K A E E M+ G P TY ++ + N
Sbjct: 336 KCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKT---NR 392
Query: 327 AKEFQDLVEKMDE 339
++ L+E+MDE
Sbjct: 393 VEKALLLLEEMDE 405
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L++A G++ ++ A L +K +C +
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE--NCGRSS 446
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK+ K + L ++M G P+ YN L+ RA M E L
Sbjct: 447 ARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALR 506
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L +G+ + + + K + + I+P ++N +L S ++G
Sbjct: 507 TMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSG 566
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
FE+ + +M M + + +TY+ +++A G+ +
Sbjct: 567 MFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDE 602
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 160/372 (43%), Gaps = 50/372 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML Q EK HEL+ M +EG C +T +++AL+SA+ + G D A LL MK
Sbjct: 203 MLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQ 262
Query: 57 PD-------------------------------CQPDVNTYSILIKSCLKAFAFDKVQAL 85
P C+PDV TY+ LI+ KA D+
Sbjct: 263 PTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHF 322
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTLVKMLSEDCEPDVWTMNC 138
+M + +P+TV N +I+ G+A K+F EM ++ C P+V T N
Sbjct: 323 YHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS-------HCIPNVVTYNT 375
Query: 139 TLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++A F + ++ + +E+ + +GI PS T++IL+D + K EK ++E M +
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ Y +IDA G+A LF+ ++ S +++ G AG+ +
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
++ + + +N L+ R E + MQ+ GC PD +Y ++
Sbjct: 496 INLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNG 555
Query: 318 YSTNGMKNHAKE 329
+ G + A E
Sbjct: 556 LAKTGGPHRAME 567
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 139/345 (40%), Gaps = 15/345 (4%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
MLG K KA +F + C Q++ +++ G ++K L M N C
Sbjct: 168 MLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCH 227
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-------DAYGRAKM 113
PD TYS LI + K D LL++M G++P Y +I + +G +
Sbjct: 228 PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F EM C PDV+T +R G +G+ID Y + Q +P N
Sbjct: 288 FEEMRYMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNN 340
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSE 232
+++ GKAG + + E M H +VTYN +I A F + ++ F M+
Sbjct: 341 MINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
I PS T L+ + + EK +L +D + L+DA G+ K +
Sbjct: 401 GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + +++ Y M++ G + A D + K+
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 4/287 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS-GLFDKAFSLLEHMKNTPDCQ 60
LGK + + +LF+ M C N ++ ++ A S + FS E MK +
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS-GIS 403
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P TYSILI K +K LL +M +G P Y +LIDA G+AK + ++
Sbjct: 404 PSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLACE 462
Query: 121 LVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + L E+C ++ G +G++D +++ G P++ +N L+
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA 522
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+A ++ M MQ++ I +YNI+++ + G + + M++ IKP V
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
+ +++ A HAG E+ +++ ++ D + ++ +++A G++
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A+ + M E C +T +++ G++G D L E M C P
Sbjct: 310 LGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM-GVSHCIP 368
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ ++ + +V + M GI P+ TY+ LID + + E +
Sbjct: 369 NVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRI-EKAMM 427
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L A G + + D + +++ + S + +++ G
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + + M K + + YN ++ RA L + R M+ P
Sbjct: 488 KAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDIN 547
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P + +L + NS I D V +N ++ A F E +++ M
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Query: 300 QQRGCKPDKVTYRTMVRA 317
G + D +TY +++ A
Sbjct: 608 NALGFEYDLITYSSILEA 625
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A LF M GC N ++ AL+S R+ + D+A + + M+ C P
Sbjct: 486 LGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH-GCLP 544
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+N+Y+I++ K + +L++M I+P+ V+YNT++ A A MF E +
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELM 604
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+M + E D+ T + L A G Q
Sbjct: 605 KEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 2/260 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT-VTYNTLIDAYGRAKMFAEME 118
Q D +TY LI + ++ ++ +M I T + + +I G AKM +
Sbjct: 120 QHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAI 179
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG-IQPSINTFNILLDS 177
++ + C+P N + + GQ + + + Y + + G P T++ L+ +
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISA 239
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K G + ++ M++ T Y ++I F + ++ LF MR +P
Sbjct: 240 FCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPD 299
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+R G AG+ ++ + D DTV N +++ G+ + + E
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359
Query: 298 VMQQRGCKPDKVTYRTMVRA 317
M C P+ VTY T+++A
Sbjct: 360 EMGVSHCIPNVVTYNTIIKA 379
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 37/244 (15%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
+T TY LI + + EM + +M+ S C ++ +R GN+ I
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITI 181
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFG 214
+ + ++ QP+ +N ++ G +EK+ + M + H VTY+ +I AF
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFC 241
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G L M+ ++P+ + Y M+ ++
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPT-------AKIY--------------------TMIISL 274
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
FF L + +G L F EM+ + C+PD TY ++R G + A F +
Sbjct: 275 FFK-LDNVHGALSLFEEMRYMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEM 326
Query: 335 EKMD 338
++ D
Sbjct: 327 QRED 330
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 6/339 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A +LF+ M +G + S+ +L+ + +G ++++ LL+ M + Q
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ-GLQ 282
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T+++LI + K + + LL M GI P+ VTYN+LI+ +
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
V M S+ CEPDV + N + + + +++ K Y + G +P++ T++ LL
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 402
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG + + M+ + + TY I +D + L + LF ++S K
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 462
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L L+ AGK E + + N + V + ++ + R + +++ M+
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
GC PD +TY T++R + + N +E L+ +M +
Sbjct: 523 ANGCTPDIITYNTLMRGFYES---NKLEEVVQLLHRMAQ 558
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 13/344 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A F M+ + SF LLS + + + FSL M+ D T +IL+
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR-LSGLSSDRCTLNILL 111
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ A + + +G PN VTYNTLI +E ++M C
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS------AGIQPSINTFNILLDSYGKAGHF 184
PDV T ++ +G I+ K +++ + +P++ T+NI++D K G
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + E M+ +I++YN +I F AG ++ + L M + ++P VT L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ GK + +L + S I+ D V +N L++ + + + + M +GC
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+PD ++Y ++ YS + ++ ++ +E L KRP+
Sbjct: 352 EPDVISYNVLINGYSK------TLKVEEAMKLYNEMLLVGKRPN 389
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 49/372 (13%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-----TPDCQPDVN 64
+A LF M GC + ++ L+ +G + A L + M N +C+P+V
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+I++ K D+ + L +M TQG+ P+ ++YN+LI + A + E + L +M
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
L + +PD+ T N + G++ +K +GI P + T+N L++ + G
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ M +++YN++I+ + + +++ L+ M +P+ +T SL
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396
Query: 245 VRAYGHAGK---PEKLGSVLR-------------FID-------------------NSDI 269
++ AGK +KL SV++ F+D +S+
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456
Query: 270 MLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
L+ NCL+D G+L+ E+ E + G +P+ VTY M+ + G +
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWEL---FEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 513
Query: 327 AKEFQDLVEKMD 338
A L++KM+
Sbjct: 514 ANV---LIQKME 522
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 3/312 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E++ L M+D+G + +F L+ + G +A LL M + PD+ TY+
Sbjct: 267 EESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES-GIVPDLVTYNS 325
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ + + L M ++G P+ ++YN LI+ Y + E +ML
Sbjct: 326 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 385
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-HFEKM 187
P+V T + L+ +G++D +K + ++ GI + T+ I LD K FE M
Sbjct: 386 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 445
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
E ++ ++ I N +ID +AG L+ LF + +E +P+ VT ++
Sbjct: 446 KLFTE-LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ G+ +K +++ ++ + D + +N L+ + E+ +L M Q+ PD
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564
Query: 308 KVTYRTMVRAYS 319
+T +V S
Sbjct: 565 AITCSIVVDMLS 576
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + +A +L M++ G + ++ +L+ + G + A L M + C+PD
Sbjct: 296 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP-SKGCEPD 354
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V +Y++LI K ++ L ++M G RPN +TY++L+ A + +
Sbjct: 355 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 414
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + + +T L + + K + + +S+ + I N L+D KAG
Sbjct: 415 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 474
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + E + + +VTY I+I F R G + + L + M + P +T
Sbjct: 475 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYN 534
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+L+R + + K E++ +L + D+ D + + +VD +
Sbjct: 535 TLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ELF+ + +EG + N ++T ++ + R G DKA L++ M+ C
Sbjct: 469 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN-GCT 527
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
PD+ TY+ L++ ++ ++V LL M+ + + P+ +T + ++D + + + E
Sbjct: 528 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 583
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 2/336 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ ++A EL + MV G N + T L+ + G +KAF L + + +
Sbjct: 303 GLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYK 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V+TY+ +I K ++ + LLS M QG+ PNT TY TLID + + F
Sbjct: 363 PNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL 422
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M E P+++T N + G +D + K G+Q T+ IL+ + +
Sbjct: 423 MDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ M K ++ I +Y +I F R +K+ E LF S + P+ T
Sbjct: 483 QADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKT 542
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ Y G + + + N D++ + L+ + + + + + M
Sbjct: 543 YTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMM 602
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G P +VT T+ Y + A D +EK
Sbjct: 603 DKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 140/356 (39%), Gaps = 42/356 (11%)
Query: 6 KQPEKAHELFQAMV--------------------DEGCDANTQSFTALLSAYGRSGLFDK 45
K E+A+E+ Q MV ++G +TQ+ +L GL +
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEI 207
Query: 46 AFSLLEHMKNTPDCQ----PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
A ++ M CQ PD ++ +++ +C + + L+ M +G + T
Sbjct: 208 AENMFVEM-----CQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATC 262
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+IDA+ + + KM+ P+V + G I + E+
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322
Query: 162 AGIQPSINTFNILLDSYGKAGHFEK-MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
G +P++ T L+D K G EK ++ ++ Y + TY +I+ + + L
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF----- 275
+ E L M+ + + P+ T +L+ GH K+G+ +R + D+M F
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLID--GHC----KVGNFVRAYELMDLMGKEGFSPNIY 436
Query: 276 -FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+N ++D + E +L + G + D VTY ++ + N + F
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 1/253 (0%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ +M QG+ P+T T N ++D + E V+M PD + + A
Sbjct: 176 MVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACC 235
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
N G++ E+ G T +++D++ + G+ ++ M + + ++
Sbjct: 236 NMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVI 295
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV-LRF 263
+ +I+ + G +KQ L M KP+ T +L+ G EK + L+
Sbjct: 296 NFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKL 355
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + + +++ Y + + +L MQ++G P+ TY T++ + G
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 324 KNHAKEFQDLVEK 336
A E DL+ K
Sbjct: 416 FVRAYELMDLMGK 428
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 155/344 (45%), Gaps = 42/344 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK A + ++M G N S TAL+ AYGR G ++ A ++ M+ T +P
Sbjct: 127 GKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ-TSGPEPS 185
Query: 63 VNTYSILIKSCL--------------------------------------KAFAFDKVQA 84
TY I++K+ + KA ++K +
Sbjct: 186 ALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARK 245
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+ + M+ +G+ +TVTYN+L+ + E+ +M PDV + ++A+G
Sbjct: 246 VFALMAERGVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLRPDVVSYALLIKAYG 302
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + + +E+ AG++PS +NILLD++ +G E+ V + M++ + +
Sbjct: 303 RARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLC 362
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+Y ++ A+ A D++ E F+ +R + +KP+ VT +L++ + EK+ + +
Sbjct: 363 SYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEM 422
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ I + ++DAYG+ K F + M+ G PD+
Sbjct: 423 QLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQ 466
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 147/333 (44%), Gaps = 36/333 (10%)
Query: 24 DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
D N F L++AYG+ G F+ A +L M N P+V +++ L+++ + ++ +
Sbjct: 113 DFNEMDFLMLITAYGKLGDFNGAEMVLRSM-NGNGYVPNVVSHTALMEAYGRGGRYNNAE 171
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED---CEPDVWTMNCTL 140
A+ M T G P+ +TY ++ + F E E +L+++ EPD + +
Sbjct: 172 AIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMI 231
Query: 141 RAFGNSGQIDT--------------------------------MEKCYEKFQSAGIQPSI 168
+G + + K Y++ Q +G++P +
Sbjct: 232 YMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGLRPDV 291
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
++ +L+ +YG+A E+ AV E M + YNI++DAF +G ++Q +F+
Sbjct: 292 VSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKS 351
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
MR +R P + +++ AY +A E + + + + + V + L+ + ++
Sbjct: 352 MRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNN 411
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+M + E MQ K ++ T++ AY N
Sbjct: 412 LEKMMEIYEEMQLNSIKANQTILTTIMDAYGKN 444
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 184 FEKMSAVMEYMQKYHYSWTI--VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ +S ++E++Q H+ W + + ++I A+G+ GD E + R M P+ V+
Sbjct: 96 WDLVSEILEWLQSQHW-WDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSH 154
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM-- 299
+L+ AYG G+ ++ R + S + + ++ + F E + V E +
Sbjct: 155 TALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLN 214
Query: 300 -QQRGCKPDKVTYRTMV 315
+ +PD+ + M+
Sbjct: 215 KENSPLEPDQKMFHMMI 231
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 1/318 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKS 72
L + M + GC + S+ +L +A LL M K C PDV TY+ +I
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K K L +M QG P+ VT+N++I+A +A+ EL L +M+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T + + G+ + K + + G+ P I ++N +DS K G ++ + +
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + IVTY I++ + G M F M+ + I +C+ L+ AY G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ +L + + D ++ L+ A R+ A+ M G +P+ V Y
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365
Query: 313 TMVRAYSTNGMKNHAKEF 330
++++ + T+G AKE
Sbjct: 366 SLIQGFCTHGDLVKAKEL 383
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 2/319 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
F M +G AN FT L+ AY + G+ D+A +L M+ PDV TYS LI +
Sbjct: 277 SFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ-GLSPDVFTYSTLISA 335
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEP 131
+ + M G++PNTV Y++LI + + EL M + P
Sbjct: 336 LCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP 395
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
++ N + + G++ ++ + G + I FN L+D Y G K +V+
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M TYN +++ + ++G + LFR M ++IKP+ VT ++ A
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ +L + + +N ++ R C E + + + K + T
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTL 575
Query: 312 RTMVRAYSTNGMKNHAKEF 330
TM+ + T + AK+
Sbjct: 576 NTMINSMYTVQRREEAKDL 594
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 8/347 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++PE F ++ G A+ + +L + D A +L C PD
Sbjct: 20 RARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDA 79
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMST-QGI-RPNTVTYNTLIDAYGRAKMFAEMELTL 121
+Y+I++K + LL M+ +G+ P+ VTYNT+I + + +
Sbjct: 80 FSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLY 139
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + PDV T N + A + +D E + G+ P+ T+ ++ Y
Sbjct: 140 HEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTL 199
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +E+ + + M IV++N +D+ + G K+ +F M ++ +P+ VT
Sbjct: 200 GRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ Y G + S + I+ + + F L+DAY + E +L MQ
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+G PD TY T++ A G D V+K ++ +P+
Sbjct: 320 QGLSPDVFTYSTLISALCRMG------RLADAVDKFNQMIGTGVQPN 360
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 2/327 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A E+F +M +G N ++ LL Y G F S MK
Sbjct: 231 LCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKG-DGIVA 289
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ILI + K D+ +LS+M QG+ P+ TY+TLI A R A+
Sbjct: 290 NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKF 349
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ +P+ + ++ F G + E YE + +P+I FN ++ S K
Sbjct: 350 NQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICK 409
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + ++ I+ +N +ID + G++ + + M S I P T
Sbjct: 410 EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV Y +G+ + ++ R + + I TV +N ++D R + +L M
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
G TY +++ N + A
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEA 556
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 147/389 (37%), Gaps = 74/389 (19%)
Query: 7 QPEKAHELFQAMV-DEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A +L + M +EG C + ++ ++ + + G KA +L M PDV
Sbjct: 94 RSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQ-GFVPDVV 152
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFAEM 117
T++ +I + KA A D + LL M G+ PN VTY ++I Y GR KMF EM
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212
Query: 118 ----------------------------ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
M ++ P++ T L + G
Sbjct: 213 TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCF 272
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
M + + GI + F IL+D+Y K G ++ ++ MQ S + TY+ +
Sbjct: 273 ADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTL 332
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-------- 261
I A R G L F M ++P+ V SL++ + G K ++
Sbjct: 333 ISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGI 392
Query: 262 -------------------RFIDNSDIM---------LDTVFFNCLVDAYGRLKCFAEMK 293
R +D I D + FN L+D Y + +
Sbjct: 393 PRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAF 452
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
VL+ M G PD TY T+V Y +G
Sbjct: 453 SVLDAMISAGIGPDTFTYNTLVNGYFKSG 481
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 126/296 (42%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + F M+ G NT + +L+ + G KA L+ M N +P++ ++ ++
Sbjct: 345 AVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S K + + G R + + +NTLID Y + L M+S
Sbjct: 405 HSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG 464
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD +T N + + SG+ID + + I+P+ T+NI+LD +AG +
Sbjct: 465 PDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKM 524
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + ++ TYNI++ R + +F+ + + +K + TL +++ +
Sbjct: 525 LHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYT 584
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ E+ + I +S ++ + + ++ + E + M++ GC P
Sbjct: 585 VQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY +++ C +A + A + G++ + NT++ K +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L++ ++E C PD ++ L+ S Q + + K + P + T+N ++
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAK-EEGVCSPDVVTYNTVIH 124
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ K G K + M + + +VT+N +I+A +A + E L R M + P
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMK 293
+ VT S++ Y G+ E+ + R + ++ D V +N +D+ +GR K AE
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE-- 242
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ M +G +P+ VTY ++ Y+T G
Sbjct: 243 -IFYSMAAKGHRPNIVTYGILLHGYATEG 270
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA + AM+ G +T ++ L++ Y +SG D +L M + +P TY+I+
Sbjct: 450 KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSD-KKIKPTTVTYNII 508
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ +A Q +L +M G + TYN ++ R E + K+ + +
Sbjct: 509 LDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNV 568
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ ++ T+N + + + + + + +G+ P+ +T+ I++ + K G E+
Sbjct: 569 KFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADN 628
Query: 190 VMEYMQK 196
+ M+K
Sbjct: 629 MFSSMEK 635
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M+ G + ++ +L R+ D+A + + + T + + ++ T + +I
Sbjct: 521 AQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKL-CTMNVKFNITTLNTMI 579
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S ++ + L S +S G+ PN TY +I + E + M C
Sbjct: 580 NSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCA 639
Query: 131 PDVWTMNCTLRAFGNSGQI 149
P +N T+R G+I
Sbjct: 640 PCSRLLNDTIRTLLEKGEI 658
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ L+S+ G +L E PDV +++++IK + K
Sbjct: 213 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 272
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M+ G P+TVT+N ++D R + L ++ + C P+V T +
Sbjct: 273 ALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 332
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G+++ Y ++GI P+ T+N+L++ YGK G V + M +
Sbjct: 333 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 392
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+VT++ +ID + R G L ++ M RI+P+ T ++ + + ++ +
Sbjct: 393 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICL 452
Query: 261 LRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L ++ DI +N ++D + E + + M+++GC+PDK TY ++ Y
Sbjct: 453 LNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYC 512
Query: 320 TNGMKNHAKE----FQDLVE 335
MK+ E F ++VE
Sbjct: 513 ---MKSRISEAIMFFHEMVE 529
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 38/334 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q +KA EL + M + GC +T + ++ R+ + +L ++ C
Sbjct: 263 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM 322
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ +I KA + A+ +DM GI PNTVTYN LI+ YG+
Sbjct: 323 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 382
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M C PDV T + + + GQ+D + + IQP++ TF+I++ S K
Sbjct: 383 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 442
Query: 181 AGHF-EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
E + + E + + YN VID + G + + + + M + +P
Sbjct: 443 QNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKY 502
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ Y S I +FF+ +V+A
Sbjct: 503 TYTILIIGYCM---------------KSRISEAIMFFHEMVEA----------------- 530
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
GC PD +T + GM N L
Sbjct: 531 ---GCSPDSITVNCFISCLLKAGMPNEVDHVMRL 561
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ S ++ RSG A L + M PD S L+ SC A D L
Sbjct: 146 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 205
Query: 86 LSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LS S G R YN L+ + GR ++ + L + PDVW+
Sbjct: 206 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWS--------- 256
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
FN+++ + G +K ++E M ++ S V
Sbjct: 257 --------------------------FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV 290
Query: 205 TYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T+NI++D R ++ + E L RL R P+ VT S++ Y AGK E +V
Sbjct: 291 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYND 350
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ S IM +TV +N L++ YG++ V + M + C PD VT+ +++ Y G
Sbjct: 351 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 410
Query: 324 KNHA 327
+ A
Sbjct: 411 LDDA 414
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 45/372 (12%)
Query: 5 CKQPE--KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
C Q + +A +L + M + G C + ++ ++ + + G +KA L + M + P
Sbjct: 195 CNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP- 253
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TYS ++ + KA A DK +A L M +G+ P+ TYN LI Y + E
Sbjct: 254 --PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M + PDV +N + + G+I ++ G P + ++ I+L+ Y
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G M+ + + M + I T+N++I A+ G L + +F MR +KP
Sbjct: 372 ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431
Query: 239 VTLCSLVRAYGHAGK-----------------PEKL------------GSVLRF------ 263
VT +++ A GK P+K GS+L+
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG- 322
I N+ + LD VFF +++ +L + + + ++ G PD V Y ++ Y G
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551
Query: 323 MKNHAKEFQDLV 334
M+ + F +V
Sbjct: 552 MEKALRVFDAMV 563
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S+ LL + G +A LL M + C PDV Y+ +I K +
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTY++++ A +A+ + E L +M+++ PD WT N +
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + N L+ S K G ++ V + M +
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +Y I+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 418
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 479 HGSLLKAKEL 488
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 148/337 (43%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 46 RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAAS---R 102
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P TY+IL+ C +A + A + G+R + + + L+ + AK
Sbjct: 103 AQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK 162
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ N L++ G SGQ D + + + + P +
Sbjct: 163 RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-CSPDV 221
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + +VTY+ V+ A +A + + E R
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++ + P T +L+ Y G+ ++ V + + I+ D V N L+ + YG+
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 342 IK---EARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 128/303 (42%), Gaps = 1/303 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
+LF M+ +G +F L+ AY G+ DKA + M++ +P V TY +I +
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPHVVTYMTVIAA 440
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ D + M QG+ P+ Y+ LI + + + + ++++ D
Sbjct: 441 LCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + G++ + ++ + G+ P +N+L+D Y G EK V +
Sbjct: 501 IVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 560
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M +V Y +++ + + G + + LFR M + IKPS + ++ AG
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + S I ++ ++ ++ + +CF E + + ++ K D +T
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 313 TMV 315
TM+
Sbjct: 681 TMI 683
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N + D+ +
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGS 506
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P+ V YN L+D Y + M+S
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS +NI++D +AG
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + TY+IV+ + + +LF+ +R+ +K +TL +++
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+PD
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 746
Query: 309 VTYRTMVR 316
+VR
Sbjct: 747 RLLNHVVR 754
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 140/369 (37%), Gaps = 35/369 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PD 58
L K + +KA + MV++G + ++ L+ Y +G + +A + + M+ PD
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325
Query: 59 C-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
PDV +Y+I++ + L
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI P T+N LI AY M + + +M +P V T + A G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + + + G+ P ++ L+ + G K ++ + IV +
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I+ + G + + +F L + + P V L+ Y GK EK V + ++
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + V + LV+ Y ++ E + M Q+G KP + Y ++ G A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 328 K-EFQDLVE 335
K +F ++ E
Sbjct: 626 KVKFHEMTE 634
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 54 --------KNTP---------DCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P + +N TYSI+++ K FD+ L ++ +
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ + +T NT+I + + E + + P T + + G ++ E
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAED 732
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P N ++ K + A + + + ++S +T +++D F
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 792
Query: 215 RAGDLK-QMEYL 225
G + Q+ +L
Sbjct: 793 SKGTCREQIRFL 804
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + +A ++F M+ G + T +F A++ YG++G +A L+ MK DC PD
Sbjct: 240 GEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPD 299
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG------------- 109
V TY+ LI+ +K + V L M G+ P+ VT+ TLI AY
Sbjct: 300 VATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQ 359
Query: 110 ----------------------RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
RA+ ++ E ++ + L +V T + +
Sbjct: 360 EMEGSGFFIDQAMYTVMIAMYVRARDVSKAE-SVFRFLHSRGGLEVSTYVGVMDVYAEHK 418
Query: 148 QIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+D + +E ++AG++ PS+ +N+++ +YG F V E M+K S ++
Sbjct: 419 CLDQAREVFELAKNAGLKTPSL--YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASF 476
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I + L+ ++ + L+++ KPS + S+V YG G+ + V + +
Sbjct: 477 NSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLA 536
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
S + D + ++ L++AY E + L+ ++ G PD + Y +M++ YS G+
Sbjct: 537 SGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAE 596
Query: 327 AKEFQDLVEKMDETCLA 343
A++ + + ++ A
Sbjct: 597 AEKIYEEISRLSPDVFA 613
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 46/358 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ + E + + M+ E +++ L+ +GR+G+ D+A HM + +P
Sbjct: 127 LGRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIES-GVEP 185
Query: 62 D---VNTYSIL------IKSCLKAF---------------------------------AF 79
D V+TY L ++ KAF F
Sbjct: 186 DEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTKRPENPETFNTMISFYGEHAKF 245
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-EDCEPDVWTMNC 138
+ + ++M G+ TVT+N +I YG+A E EL + KM +DC PDV T N
Sbjct: 246 AEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNS 305
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ + + +++ + C E+ + +G+ P TF L+ +Y K A+++ M+
Sbjct: 306 LIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSG 365
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ Y ++I + RA D+ + E +FR + S R T ++ Y ++
Sbjct: 366 FFIDQAMYTVMIAMYVRARDVSKAESVFRFLHS-RGGLEVSTYVGVMDVYAEHKCLDQAR 424
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
V N+ + ++ +N ++ AYG F + V E M++ G P++ ++ ++++
Sbjct: 425 EVFELAKNAGLKTPSL-YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQ 481
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 8/284 (2%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+ KA + + + + +V Y+IL+++ +A ++ +Q S+M + + P TY+
Sbjct: 97 WRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYS 156
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
L+D +GRA M E M+ EPD ++ + G ++ EK + S
Sbjct: 157 ILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSE 216
Query: 163 GI------QP-SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ +P + TFN ++ YG+ F + S V M K T VT+N +I +G+
Sbjct: 217 NLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGK 276
Query: 216 AGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
AG ++ E L M+ + P T SL+ Y K E + L + +S + D V
Sbjct: 277 AGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQV 336
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
F L+ AY + + +++ M+ G D+ Y M+ Y
Sbjct: 337 TFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMY 380
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 135/305 (44%), Gaps = 8/305 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+F+ + G + + ++ AYG F A ++ E M+ P+ +++
Sbjct: 421 DQAREVFELAKNAGLKTPSL-YNVMMKAYGACDRFTDAVTVFEAMEKD-GASPNEASFNS 478
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ K + +Q +L + G +P+ + ++++ YG E E +ML+
Sbjct: 479 LIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASG 538
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E DV + L A+ +G ++ + ++AG P + ++ Y G +
Sbjct: 539 VEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAE 598
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC--VTLCSLVR 246
+ E + + S + N +++ + ++G + E LFR M +R KP V +++
Sbjct: 599 KIYEEISRL--SPDVFAANTMLNLYIKSGMFTEAEQLFRAM--QRGKPGLNEVACTMMLK 654
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK E+ V R + ++ D FN ++ Y + E L+ M++ G P
Sbjct: 655 LYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKEMRRAGLVP 714
Query: 307 DKVTY 311
+ T+
Sbjct: 715 SRSTF 719
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+ ++ +NILL + G+A +E + M TI TY+I++D GRAG +
Sbjct: 114 EANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIR 173
Query: 225 LFRLMRSERIKPSCV---TLCSLVRAYGHAGKPEKLGSVL---RFIDNSDIMLDTV-FFN 277
+R M ++P V T +L R +G + EK L +D + + FN
Sbjct: 174 FYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTKRPENPETFN 233
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++ YG FAE V M + G + VT+ M+ Y G +E + LV KM
Sbjct: 234 TMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAG---RTREAELLVTKM 290
Query: 338 DE 339
+
Sbjct: 291 KQ 292
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 4/331 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ EKA E+ +++V+ G + +++ Y + G D+A +E M+ + +
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME-SRGLR 309
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ ++ +I + DK + + M +GI P+ TYN LID YGR +F+
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + G+I E G+ P+ N +N+L+D
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M K TIVTYN +I + G LK+ E +F L+ S P +T
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVIT 489
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ Y +AG +K + + + F+ L+ + + + + M
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEML 548
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
Q PD+V Y M+ Y G A Q
Sbjct: 549 QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQ 579
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 6/279 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T SIL+ K +K + +L + G+ P V YNT+++ Y + LT+
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S P+ N + F ID E+ +K GI PS+ T+NIL+D YG+
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + ++E M++ +++Y +I+ + G + + E + R M + P+
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ G KL LRF D + I V +N L+ ++ E + + +
Sbjct: 421 NMLIDGSCTVG---KLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFL 477
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ G PD +TY +++ YS G E + ++K+
Sbjct: 478 ITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 138/316 (43%), Gaps = 37/316 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E + MV +G + +++ L+ YGR +F + F +LE M+ + +P+V +Y
Sbjct: 329 DKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE-KPNVISYGS 387
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAK----MFAEME--- 118
LI K + + +L DM +G+ PN YN LID G+ + F EM
Sbjct: 388 LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNG 447
Query: 119 -----LTLVKMLSEDCE--------------------PDVWTMNCTLRAFGNSGQIDTME 153
+T ++ C+ PDV T N + + N+G
Sbjct: 448 IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCL 507
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ YE + G++P+INTF+ L+ K G K + E +Q + S V YN +I +
Sbjct: 508 ELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQ-MNLSPDRVVYNAMIHCY 566
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
G +++ L + M ++P T SL+ + GK + ++ + ++ +
Sbjct: 567 QETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEA 626
Query: 274 VFFNCLVDAYGRLKCF 289
++ L+ + LK F
Sbjct: 627 DTYSLLIQGHCDLKDF 642
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 40/337 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K+ + +LF+ MV G + + + A + G A L E MK P
Sbjct: 41 LVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK-VVP 99
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V Y++LI K + L +MS + + PN VT+NTLID Y +A
Sbjct: 100 NVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKA---------- 149
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
G++D E+ + ++PSI TFN LL KA
Sbjct: 150 -------------------------GEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-LFRLMRSERIKPSCVT 240
E+ ++ ++ + TY+I+ D ++ D L+R + +K T
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK EK VL+ + ++ V +N +V+ Y ++ +E M+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
RG +P+ + + +++ + M + A+E+ V+KM
Sbjct: 305 SRGLRPNCIAFNSVIDKFCEMQMIDKAEEW---VKKM 338
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 147/366 (40%), Gaps = 39/366 (10%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A +LF M N +F L+ Y ++G D A L E MK +
Sbjct: 110 GLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK-VE 168
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + T++ L+ KA ++ + +L+++ G P+ TY+ + D ++ A L
Sbjct: 169 PSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228
Query: 121 LVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY----------------------- 156
L + + + + D +T + L G+++ E+
Sbjct: 229 LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYC 288
Query: 157 ------------EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
E+ +S G++P+ FN ++D + + +K ++ M + ++
Sbjct: 289 QIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVE 348
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYNI+ID +GR + + M KP+ ++ SL+ GK + VLR +
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM 408
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
++ + +N L+D + E + M + G VTY ++++ G
Sbjct: 409 VGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKL 468
Query: 325 NHAKEF 330
A+E
Sbjct: 469 KEAEEM 474
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A E+F + G + ++ +L+S Y +G K L E MK +
Sbjct: 461 GLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL-GLK 519
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +NT+ LI C K + L ++M + P+ V YN +I Y +
Sbjct: 520 PTINTFHPLISGCSKE-GIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSL 578
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M+ PD T N + G++ + + ++ G+ P +T+++L+ +
Sbjct: 579 QKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGH 636
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 9/265 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A F M G A ++ +L+ + G +A + + +T C PDV TY+ L
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC-PDVITYNSL 493
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSED 128
I A K L M G++P T++ LI G +K +++ TL +ML +
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS--GCSKEGIKLKETLFNEMLQMN 551
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD N + + +G + ++ G++P T+N L+ + K G +
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS---CVTLCSLV 245
+++ M+ TY+++I D +R M P+ C L + +
Sbjct: 612 DLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671
Query: 246 RAYGHAGKPEKLGS--VLRFIDNSD 268
R G + + + S + +DN D
Sbjct: 672 RKDGRLQEAQSICSEMIANGMDNLD 696
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 123/307 (40%), Gaps = 42/307 (13%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
LLS S + + L + M+ P ++++S +++ FD V L +M
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRL-PSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G RP+ + Y GRA M A ++L +K+ E
Sbjct: 61 GFRPDKLVY-------GRA-MLAAVKLGDLKLAME------------------------- 87
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+E + + P++ +N+L+ K + M + VT+N +ID
Sbjct: 88 --LFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+ +AG++ L M+ E+++PS +T SL+ A + E+ +L I + + D
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
++ + D G LK L++ ++ +G K D T ++ G A+E
Sbjct: 206 GFTYSIIFD--GLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEE 263
Query: 330 -FQDLVE 335
+ LVE
Sbjct: 264 VLKSLVE 270
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 39/365 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L MV+ GC + ++ ++++ RSG A LL M+ + + DV TYS +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 234
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S + D +L +M T+GI+ + VTYN+L+ +A + + L L M+S +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T N L F G++ + Y++ + GI P+I T+N L+D Y + +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 190 VMEYMQKYHYSWTI-----------------------------------VTYNIVIDAFG 214
+++ M + S I VTY+I++ F
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++G +K E LF+ M S + P +T L+ GK EK + + S + L V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ +++ + + + + +G KP+ +TY M+ G E L+
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG---SLSEANILL 531
Query: 335 EKMDE 339
KM+E
Sbjct: 532 RKMEE 536
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M +G ++ ++ +L+ ++G ++ LL+ M + + P+V T+++
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNV 303
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ +K + L +M T+GI PN +TYNTL+D Y +E L M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T ++ + ++D K + G+ + T++IL+ + ++G +
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + ++TY I++D G L++ +F ++ ++ V +++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK E ++ + + + + + ++ + +E +L M++ G P+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 309 VTYRTMVRAYSTNG 322
TY T++RA+ +G
Sbjct: 544 CTYNTLIRAHLRDG 557
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD T++ LIK + L+ M G +P+ VTYN++++ R+ +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM + + DV+T + + + G ID +++ ++ GI+ S+ T+N L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + +++ M ++T+N+++D F + G L++ L++ M + I P+ +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y + + ++L + + D V F L+ Y +K + V +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+RG + VTY +V+ + +G A+E FQ++V
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A LFQ M+ + F+ SA R+ F+ + ++ ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTL 126
Query: 67 SILI----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+I+I + C FA+ ++L + G P+T T+NTLI +E + +
Sbjct: 127 NIMINCFCRCCKTCFAY----SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ C+PDV T N + SG K + ++ + T++ ++DS + G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M+ ++VTYN ++ +AG L + M S I P+ +T
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + GK ++ + + + I + + +N L+D Y +E +L++M +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 303 GCKPDKVTYRTMVRAY 318
C PD VT+ ++++ Y
Sbjct: 363 KCSPDIVTFTSLIKGY 378
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 39 RSGLFD----KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
RSG+ D A +L + M ++ P P + +S + + F+ V + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRP--LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I N T N +I+ + R L K++ EPD T N ++ G++
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ G QP + T+N +++ ++G ++ M++ + + TY+ +ID+
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + LF+ M ++ IK S VT SLVR AGK +L+ + + +I+ +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN L+D + + E + + M RG P+ +TY T++ Y M+N E ++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC---MQNRLSEANNM 355
Query: 334 VEKM 337
++ M
Sbjct: 356 LDLM 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELFQ MV G + ++ LL +G +KA + E ++ + + Y+ +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTII 480
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + L + +G++PN +TY +I + +E + L KM +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
P+ T N +RA G + K E+ +S G ++ +++D
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 12/246 (4%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + ++F+ + G AN +++ L+ + +SG A L + M + PDV T
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMT 440
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y IL+ +K + D+ + V Y T+I+ + + +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +P+V T + G + K + G P+ T+N L+ ++ + G
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-----------LFRLMRSERI 234
+ ++E M+ +S + +VID A + Y L L SE+I
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKI 620
Query: 235 KPSCVT 240
+ S +T
Sbjct: 621 RLSSLT 626
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC ++ L+S+ G +L E PDV +++++IK + K
Sbjct: 208 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQK 267
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED-CEPDVWTMNCTL 140
L+ M+ G P+TVT+N ++D R + L ++ + C P+V T +
Sbjct: 268 ALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 327
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ +G+++ Y ++GI P+ T+N+L++ YGK G V + M +
Sbjct: 328 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 387
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+VT++ +ID + R G L ++ M RI+P+ T ++ + + ++ +
Sbjct: 388 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRL 447
Query: 261 LRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
L ++ DI +N ++D + E + + M+++GC+PDK TY ++ Y
Sbjct: 448 LNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYC 507
Query: 320 TNGMKNHAKE----FQDLVE 335
MK+ E F ++VE
Sbjct: 508 ---MKSRISEAIMFFHEMVE 524
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 38/334 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q +KA EL + M + GC +T + ++ R+ + +L ++ C
Sbjct: 258 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM 317
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ +I KA + A+ +DM GI PNTVTYN LI+ YG+
Sbjct: 318 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 377
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M C PDV T + + + GQ+D + + IQP++ TF+I++ S K
Sbjct: 378 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 437
Query: 181 AGHF-EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
E + + E + + YN VID + G + + + + M + +P
Sbjct: 438 QNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKY 497
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ Y S I +FF+ +V+A
Sbjct: 498 TYTILIIGYCM---------------KSRISEAIMFFHEMVEA----------------- 525
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
GC PD +T + GM N L
Sbjct: 526 ---GCSPDSITVNCFISCLLKAGMPNEVDHVMRL 556
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ S ++ RSG A L + M PD S L+ SC A D L
Sbjct: 141 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 200
Query: 86 LSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LS S G R YN L+ + GR ++ + L + PDVW+
Sbjct: 201 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWS--------- 251
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
FN+++ + G +K ++E M ++ S V
Sbjct: 252 --------------------------FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV 285
Query: 205 TYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
T+NI++D R ++ + E L RL R P+ VT S++ Y AGK E +V
Sbjct: 286 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYND 345
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ S IM +TV +N L++ YG++ V + M + C PD VT+ +++ Y G
Sbjct: 346 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 405
Query: 324 KNHA 327
+ A
Sbjct: 406 LDDA 409
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 161/400 (40%), Gaps = 77/400 (19%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ Q + A +LF M G + S+ AL+ + +G D+A L ++
Sbjct: 171 ILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE---- 226
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
QPD+ T++ L+K A ++ +L M G RP T Y L+D + R + E E
Sbjct: 227 -QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAE 285
Query: 119 LTLVKMLS-----------------------------------EDCEPDVWTMNCTLRAF 143
L +M + CEP+VWT N ++ F
Sbjct: 286 KMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGF 345
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
N G++ ++ + G++P + T+N+L+ GH E ++ M+ +
Sbjct: 346 CNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQ 405
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-------PEK 256
TYN++IDA + G + + LF + I+P+ VT +++ GK EK
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEK 465
Query: 257 LGSV-------------------------LRFID---NSDIMLDTVFFNCLVDAYGRLKC 288
+ S L FID D+ TV + ++D + +
Sbjct: 466 MVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + M GC PD VTY T VRAY G + A+
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAE 565
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 157/345 (45%), Gaps = 17/345 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A LF + G N+ +F +++ + G FD A + LE M + C P
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA-GCAP 473
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TYS I++ K + + + +M + ++P+TV Y +ID + + +
Sbjct: 474 DTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIW 533
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+S C PDV T ++RA+ N G++ E + + GI +N L+D +
Sbjct: 534 GQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSI 593
Query: 182 GHFEKMSAVMEYMQKY-----HYSWTIVTYN-----------IVIDAFGRAGDLKQMEYL 225
G + ++++M H+++ I+ + + + + +L + L
Sbjct: 594 GKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFEL 653
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
F LM+ + S +++ + + +++ S++ + D+ L+ + LV+ + +
Sbjct: 654 FELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCK 713
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L+ + + +L M G P+ ++Y+ ++ ++ G + AKE
Sbjct: 714 LRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 4/308 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F +LL+ + R L L HM + P TY+ LI++ + Q LS
Sbjct: 94 RTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLS 153
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M G RP+ T+N+LI Y R + + KM D + + F +G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG 213
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + + + + QP + T L+ A E+ +++ M++ + Y
Sbjct: 214 RVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYA 269
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++D + R ++ E + M + P VT ++V AY G+ V +
Sbjct: 270 ALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK 329
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +N +V + + + +L+ M++ G +PD VTY ++R +G A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389
Query: 328 KEFQDLVE 335
L+E
Sbjct: 390 FRLLRLME 397
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/358 (17%), Positives = 122/358 (34%), Gaps = 52/358 (14%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+ MV GC +T +++ + ++ + S ++ M D +P Y+I+I
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK-DVKPSTVNYTIVIDRL 520
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K + + M + G P+ VTY T + AY E E +++M D
Sbjct: 521 FKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDA 580
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL----------------DS 177
N + + G+ D + P+ TF ILL S
Sbjct: 581 MAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTS 640
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE----- 232
K + + E M+K + Y +++ F L ++ L M+ +
Sbjct: 641 VWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLN 700
Query: 233 --------------RIKP-SCVTLCS---------------LVRAYGHAGKPEKLGSVLR 262
R+ P + LCS L+ + G+ ++ + R
Sbjct: 701 EDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + D + + ++D R ++ +++Q CKP TY + ST
Sbjct: 761 GLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELST 818
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 39/365 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L MV+ GC + ++ ++++ RSG A LL M+ + + DV TYS +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 234
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S + D +L +M T+GI+ + VTYN+L+ +A + + L L M+S +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T N L F G++ + Y++ + GI P+I T+N L+D Y + +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 190 VMEYMQKYHYSWTI-----------------------------------VTYNIVIDAFG 214
+++ M + S I VTY+I++ F
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++G +K E LF+ M S + P +T L+ GK EK + + S + L V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ +++ + + + + +G KP+ +TY M+ G E L+
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG---SLSEANILL 531
Query: 335 EKMDE 339
KM+E
Sbjct: 532 RKMEE 536
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M +G ++ ++ +L+ ++G ++ LL+ M + + P+V T+++
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNV 303
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ +K + L +M T+GI PN +TYNTL+D Y +E L M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T ++ + ++D K + G+ + T++IL+ + ++G +
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + ++TY I++D G L++ +F ++ ++ V +++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK E ++ + + + + + ++ + +E +L M++ G P+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 309 VTYRTMVRAYSTNG 322
TY T++RA+ +G
Sbjct: 544 CTYNTLIRAHLRDG 557
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD T++ LIK + L+ M G +P+ VTYN++++ R+ +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM + + DV+T + + + G ID +++ ++ GI+ S+ T+N L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + +++ M ++T+N+++D F + G L++ L++ M + I P+ +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y + + ++L + + D V F L+ Y +K + V +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+RG + VTY +V+ + +G A+E FQ++V
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A LFQ M+ + F+ SA R+ F+ + ++ ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTL 126
Query: 67 SILI----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+I+I + C FA+ ++L + G P+T T+NTLI +E + +
Sbjct: 127 NIMINCFCRCCKTCFAY----SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ C+PDV T N + SG K + ++ + T++ ++DS + G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M+ ++VTYN ++ +AG L + M S I P+ +T
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + GK ++ + + + I + + +N L+D Y +E +L++M +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 303 GCKPDKVTYRTMVRAY 318
C PD VT+ ++++ Y
Sbjct: 363 KCSPDIVTFTSLIKGY 378
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 39 RSGLFD----KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
RSG+ D A +L + M ++ P P + +S + + F+ V + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRP--LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I N T N +I+ + R L K++ EPD T N ++ G++
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ G QP + T+N +++ ++G ++ M++ + + TY+ +ID+
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + LF+ M ++ IK S VT SLVR AGK +L+ + + +I+ +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN L+D + + E + + M RG P+ +TY T++ Y M+N E ++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC---MQNRLSEANNM 355
Query: 334 VEKM 337
++ M
Sbjct: 356 LDLM 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELFQ MV G + ++ LL +G +KA + E ++ + + Y+ +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTII 480
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + L + +G++PN +TY +I + +E + L KM +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
P+ T N +RA G + K E+ +S G ++ +++D
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 1/206 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + ++F+ + G AN +++ L+ + +SG A L + M + PDV T
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMT 440
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y IL+ +K + D+ + V Y T+I+ + + +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +P+V T + G + K + G P+ T+N L+ ++ + G
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVID 211
+ ++E M+ +S + +VID
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVID 586
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ + +L + MV +GC N ++ L+ YG + +A ++ M+ C+
Sbjct: 386 ILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEV-GCE 444
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D ++ M G+ P+T TY+ +I+ G+A A
Sbjct: 445 PDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWL 504
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ C P++ T N + + + K Y Q+AG QP T++I++++ G
Sbjct: 505 FCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGH 564
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ E+ +V MQ+ ++ Y +++D +G+AG++++ ++ M + + P+ T
Sbjct: 565 CGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPT 624
Query: 241 LCSLVRAY 248
SL+ A+
Sbjct: 625 CNSLLSAF 632
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A + ++ P + D +TY+ ++ +A FD + LL M G +PN VTYN LI
Sbjct: 360 ALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLI 419
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
YG A E +M CEPD T + +G ID Y++ Q AG+
Sbjct: 420 HCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLS 479
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GKAG+ + M ++ +VTYNI+I +A + + L
Sbjct: 480 PDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKL 539
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ M++ +P VT ++ A GH G E+ SV + + + D + LVD +G+
Sbjct: 540 YHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGK 599
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + M G P+ T +++ A+
Sbjct: 600 AGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAF 632
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 149/317 (47%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L + + P A F + + G + ++T ++ GR+ FD LLE M C
Sbjct: 350 ILKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKD-GC 408
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
QP+V TY+ LI A + + ++M G P+ VTY TLID + +A F ++ +
Sbjct: 409 QPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAG-FIDVAM 467
Query: 120 TLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
++ K + E PD +T + + G +G + + + G P++ T+NI++
Sbjct: 468 SMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQ 527
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KA ++E + MQ + VTY+IV++A G G L++ E +F M+ + P
Sbjct: 528 AKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDE 587
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
LV +G AG EK + + N+ ++ + N L+ A+ RL + +++
Sbjct: 588 PVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQS 647
Query: 299 MQQRGCKPDKVTYRTMV 315
M G +P TY ++
Sbjct: 648 MVALGLRPSLQTYTLLL 664
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G R + TY T++ GRA+ F + L +M+ + C+P+V T N + +G + +
Sbjct: 372 GFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEA 431
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + Q G +P T+ L+D + KAG + ++ + MQ+ S TY+++I+
Sbjct: 432 LNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINC 491
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG+L +LF M P+ VT ++ A E + + N+ D
Sbjct: 492 LGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPD 551
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V ++ +++A G E + V MQQ+ PD+ Y +V + G A E+
Sbjct: 552 KVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEW 609
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 3/309 (0%)
Query: 30 FTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
FT LLSA + G +D SL + M+ P++ T SILI D ++L+
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQME-LAGLSPNIYTLSILINCFSHLQRVDLAFSVLAK 158
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ G++P VT+ TLI+ + FA+ M++ C PDV+T + G+
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+K + AG QP++ T++ ++DS+ K + + YM+ S I TYN
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I K+ L MRS I P VT LV GK + VL+ +
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ D V ++ L+ Y E + + + M +GCKPD +Y ++ Y + AK
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 329 E-FQDLVEK 336
+ F +++ +
Sbjct: 399 QLFNEMIHQ 407
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 154/336 (45%), Gaps = 4/336 (1%)
Query: 3 GKCKQPEKAHE--LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A L + M + GC N +++ ++ ++ + ++A + +MK
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK-VKGIS 270
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI+ + + ALL++M + I P+ VT+N L+D + +E +
Sbjct: 271 PDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGV 330
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M EPDV T + + + ++ K ++ + G +P + ++NIL++ Y K
Sbjct: 331 LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ + M + V+YN +I + G L++ LF+ M + P+ T
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ + G K + R + ++ + V +N L+DA + + + + +
Sbjct: 451 YSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELF 510
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
+G +P+ Y T++ G+ + A E F+++ E
Sbjct: 511 VKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 1/312 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + ++ G +FT L++ + G F +A L + M C+PDV TY+ +I
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV-ARGCRPDVYTYTTII 210
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K LL M G +PN VTY+T+ID++ + + E M +
Sbjct: 211 NGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS 270
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD++T N ++ N Q + +S I P I TFN+L+D+ K G + V
Sbjct: 271 PDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGV 330
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M + +VTY+ ++ + ++ + LF M ++ KP + L+ Y
Sbjct: 331 LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ ++ + + + + + V +N L+ +L E + + + M G P+ T
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Query: 311 YRTMVRAYSTNG 322
Y ++ + G
Sbjct: 451 YSILLDGFCKQG 462
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 152/336 (45%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ELF MV GC + ++T +++ + G A LL+ M+ CQP
Sbjct: 178 LCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA-GCQP 236
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS +I S K ++ + S M +GI P+ TYN+LI + E L
Sbjct: 237 NVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALL 296
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S + PD+ T N + G++ + + G++P + T++ L+ Y
Sbjct: 297 NEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLR 356
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + + M + +YNI+I+ + + + + + LF M + + P+ V+
Sbjct: 357 SEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSY 416
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ G + ++ + + + + + ++ L+D + + F + + MQ
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476
Query: 302 RGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
KP+ V Y ++ A +G +++ K F +L K
Sbjct: 477 TYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 160/375 (42%), Gaps = 73/375 (19%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ +A ++F M +G + ++ +L+ + +A +LL M++ + PD+
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL-NIMPDI 308
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T+++L+ + K + Q +L M+ G+ P+ VTY++L+ Y E
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDA 368
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS---------------- 167
M+++ C+PDV++ N + + +ID ++ + + G+ P+
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428
Query: 168 -------------------INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ T++ILLD + K G+F K + MQ + +V YNI
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+IDA ++G+L+ LF + + ++P+ +++ G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG---------------- 532
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+LD L+ F M++ GC PD+++Y ++R + + K+ ++
Sbjct: 533 -LLDEA-----------LEAFRN-------MEEDGCPPDEISYNVIIRGFLHH--KDESR 571
Query: 329 EFQDLVEKMDETCLA 343
Q + E D+ +A
Sbjct: 572 AVQLIGEMRDKGFIA 586
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 150/324 (46%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + M GCD N ++ L++A+ R+G D+A L++ M+ +P++ T++
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREG-GLKPNLVTFNS 232
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA + + + +M +G+ P+ V+YNTL+ Y + E +M +
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV T + +G ++ + + G+Q + TF L+D + K G +
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M++ ++V YN +I+ + G + + L R M ++ +KP VT +++ AY
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + ++ D + ++ L+ K + + + M G +PD+
Sbjct: 413 CKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
VTY +++ + G A D
Sbjct: 473 VTYTSLIDGHCKEGNVERALSLHD 496
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+IL+++ + ++L DM G PN VTYNTL+ A+ RA E
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAE-R 213
Query: 121 LVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV M+ E +P++ T N + +G+++ K +++ G+ P ++N L+ Y
Sbjct: 214 LVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + +V M + +VT+ +I +AG+L++ L R MR ++ + +
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + G + +R + I V +N L++ Y + E + ++ M
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+ +G KPD VTY T++ AY NG
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNG 416
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 141/316 (44%), Gaps = 3/316 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ++F MV EG + S+ L+ Y + G +A S+ M
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK-GIM 294
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI KA ++ L+ +M +G++ N +T+ LID + + + L
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M +P V N + + G++D + + ++ G++P + T++ +L +Y K
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M + +TY+ +I L LF+ M S ++P VT
Sbjct: 415 NGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVT 474
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ + G E+ S+ + + ++ D V ++ L++ + E + +L +
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534
Query: 301 QRGCKPDKVTYRTMVR 316
P + Y ++R
Sbjct: 535 HEEPVPANIKYDALMR 550
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V N L A ++ + + + ++ S G+ P++ T+NIL+ + GH ++ +V
Sbjct: 121 PSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+ VTYN ++ AF RAG++ + E L +MR +KP+ VT S+V
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ E V + + D V +N LV Y ++ C E V M ++G PD VT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ +++ G A LV +M E L M F
Sbjct: 300 FTSLIHVMCKAGNLERA---VGLVREMRERGLQMNEITF 335
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G P+ + YN ++ A A + + MLS+ P+V+T N +RA G
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ AG P+ T+N L+ ++ +AG ++ +++ M++ +VT+N V++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+AG ++ +F M E + P V+ +LV Y G + SV + IM D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V F L+ + G++ M++RG + +++T+ ++ + G + A
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 125/300 (41%), Gaps = 21/300 (7%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ AL++ Y G D+A L+ M+ +PDV TYS ++ + K L M
Sbjct: 370 YNALINGYCMVGRMDEARELVREME-AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+ P+ +TY++LI K + + M+S +PD T + G +
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ +++ AG+ P + T+++L++ K+ ++ ++ + YH V NI
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL--FKLYHEEP--VPANIK 544
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
DA L R R+ +K ++ +L++ + G + V + I + +
Sbjct: 545 YDA------------LMRCCRNAELK----SVLALLKGFCMKGLMNEADKVYQSILDRNW 588
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
LD ++ L+ + R + + M Q G P+ + +++R GM A +
Sbjct: 589 NLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQ 648
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 18/289 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A EL + M +G + +++ +LSAY ++G AF L + M PD TYS
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN-GVLPDAITYSS 442
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KMLSE 127
LI+ + L +M + G++P+ VTY +LID + + + E L+L +M+
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK-EGNVERALSLHDEMVKA 501
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKC-----YEKFQSAGIQ----------PSINTFN 172
PDV T + + S + ++ +E+ A I+ + +
Sbjct: 502 GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVL 561
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
LL + G + V + + +++ Y+++I R G++ + + M
Sbjct: 562 ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC 621
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
P+ + SL+R G + V++ + N + D L+D
Sbjct: 622 GFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALID 670
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 152/330 (46%), Gaps = 3/330 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G+C + E +A LF MV G + S++ +++ +SG A LL M+ C+
Sbjct: 171 GRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEK-GCK 229
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ Y+ +I S K + LLS+M +GI P+ VTY+T++ + E +
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + P+ T + G + +E G +P+ T+N L+D Y
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ V++ M + + +YNI+I+ + + L + + L M + + P VT
Sbjct: 350 NNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++ G+P++ ++ + + +S ++ D + ++ L+D + E +L+ MQ
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ 469
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +PD V Y ++ G AKE
Sbjct: 470 ESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF MV NT +FT L+ + G+ +A + E M +P+ TY+ L
Sbjct: 285 EATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK-GAEPNAYTYNAL 343
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ D+ Q +L M +G P +YN LI+ Y + + E + LV+M ++
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD T + ++ G+ +++ S+G+ P + T++ LLD K GH ++
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ MQ+ IV YNI+I+ AG L+ + LF + ++ I+P+ T +++
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
G ++ + R +++ + ++ +N ++ +
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 118/282 (41%), Gaps = 2/282 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P V + + S K + V +L + M G+ N + N LI+ R
Sbjct: 89 RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM +PD T N + G+I + + G QP + +++ +++
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G+ ++ M++ +V Y +ID+ + + L M I P V
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ + G + + + ++M +TV F LVD + +E + V E M
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
++G +P+ TY ++ Y N + A++ D++ +D+ C
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM--VDKGC 368
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 36/251 (14%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--- 55
M G C Q ++A ++ MVD+GC S+ L++ Y + D+A SLL M
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403
Query: 56 TPD-----------CQ--------------------PDVNTYSILIKSCLKAFAFDKVQA 84
TPD CQ PD+ TYS L+ K D+
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LL M I P+ V YN LI+ A + K+ ++ +P + T ++
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G D + + K + G P+ ++N+++ + + +++ M +S
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSS 583
Query: 205 TYNIVIDAFGR 215
T+ +++D R
Sbjct: 584 TFQMLLDLESR 594
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML + P V L + Q T+ + G+ ++ + NIL++ +
Sbjct: 82 RMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN 141
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
H +V+ M K +T+N +I+ G++K+ LF M +P ++
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ +G +LR ++ + V + ++D+ + + +L M R
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR 261
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G PD VTY T++ + + G N A
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEA 286
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 1/324 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
EL + MV C N +F L+S R+GLF++ +L M C PD+ Y+ +I
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH-GCTPDIRMYATIID 305
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K +L+ M + G++PN V YNTL+ A+ + E E L +M +DC
Sbjct: 306 GICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL 365
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T N + F +G +D + + E+ G P + T+ +++ + K G ++ ++
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M ++Y IV+ A E L M + + +T +L+
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G E+ +L+ + + D + ++ ++D G+ E +L VM +G P+ + Y
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVE 335
++ A S G N + D ++
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQ 569
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 6/327 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ Q E A L A+ N ++ ++ A G A ++L+ M C
Sbjct: 99 GYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR-GCA 154
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y +++++ + F +L D+ +G + N +++A +
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHL 214
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + S CEPDV + N L+ + + +++ E+ P+I TFN L+ +
Sbjct: 215 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 274
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE++ V+ M ++ + I Y +ID + G LK + M S +KP+ V
Sbjct: 275 NGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVC 334
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++ A + E+ +L + + D LD V FN LVD + + + +LE M
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
GC PD +TY T++ + G+ + A
Sbjct: 395 VHGCMPDVITYTTVINGFCKEGLIDEA 421
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+ EL M D+ C + +F L+ + ++GL D+ LLE M C PDV TY+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-VHGCMPDVITYTT 407
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K D+ LL M+ G +PNT++Y ++ A+ + + E + +M+ +
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C + T N + G ++ + ++ G P + +++ ++D GKAG ++
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M S + Y+ + A R G + ++ +F
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF---------------------- 565
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
I ++ I D V +N ++ + + L M GC P++
Sbjct: 566 -------------DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
TY ++R ++ G A+E
Sbjct: 613 STYTILIRGLASEGFVKEAQEM 634
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 1/307 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M GC + +L A R G F A +LE + + C DV ++++
Sbjct: 141 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVL 199
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + DK LL D+ + G P+ V+YN ++ AK + ++ + +M+ C
Sbjct: 200 NAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 259
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + +G + + + + G P I + ++D K GH + +
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M Y +V YN ++ A ++ E L M + VT LV +
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G +++ +L + M D + + +++ + + E +L+ M GCKP+ ++
Sbjct: 380 NGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439
Query: 311 YRTMVRA 317
Y +++
Sbjct: 440 YTIVLKG 446
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A EL MV++G NT ++++ SA R G +K + +++++T +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDT-TIRS 575
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K ++ L+ M + G PN TY LI E +
Sbjct: 576 DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ--- 632
Query: 122 VKMLSEDC 129
+ML+E C
Sbjct: 633 -EMLTELC 639
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 159/326 (48%), Gaps = 12/326 (3%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
+V G + SF +++S + G A ++ M C+PDV +Y+ LI +
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRF-GCEPDVISYNSLIDGHCRNG 105
Query: 78 AFDKVQALLSDM-STQGI--RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+L + ++ G +P+ V++N+L + + + KM E+ + + ML + C P+V
Sbjct: 106 DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVV 164
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + F SG++ K + + + P++ TF L+D Y KAG E ++ + M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ S +VTY +ID F + G++++ E ++ M +R++P+ + +++ + G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
+ L + N + LD + ++ G+LK E ++E M++ PD V +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK---EATEIVEDMEKSDLVPDMVIF 341
Query: 312 RTMVRAYSTNG-MKNHAKEFQDLVEK 336
TM+ AY +G MK + L+E+
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIER 367
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 134/355 (37%), Gaps = 43/355 (12%)
Query: 5 CKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK E L F +M + N +FT L+ Y ++G + A SL + M+ +
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR-MSLN 232
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-----------A 111
V TY+ LI K + + + S M + PN++ Y T+ID + + A
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 112 KMFAE-MELTLVK-----------------------MLSEDCEPDVWTMNCTLRAFGNSG 147
KM + M L + M D PD+ + A+ SG
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ Y K G +P + + ++D K G + + V ++K + V Y
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE-AIVYFCIEKAND----VMYT 407
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++IDA + GD ++E LF + + P S + G + +
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++LD + + L+ E + V + M G PD + ++RAY G
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 122/300 (40%), Gaps = 6/300 (2%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C N +++ + + +SG A MK P+V T++ LI KA +
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA-LSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+L +M + N VTY LID + + E +M+ + EP+ +
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
F G D K K + G++ I + +++ G ++ + ++E M+K
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+V + +++A+ ++G +K ++ + +P V L +++ G+ +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+D+M + L+DA + F E++ + + + G PDK Y + + G
Sbjct: 398 IEKANDVM-----YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 95/247 (38%), Gaps = 37/247 (14%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++S P + N + GQ+ E G +P + ++N L+D + +
Sbjct: 44 LAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCR 103
Query: 181 AGHFEKMSAVMEYMQKYH-------------------------------------YSWTI 203
G S V+E ++ H S +
Sbjct: 104 NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV 163
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTY+ ID F ++G+L+ F M+ + + P+ VT L+ Y AG E S+ +
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + L+ V + L+D + + + + M + +P+ + Y T++ + G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 324 KNHAKEF 330
++A +F
Sbjct: 284 SDNAMKF 290
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++ +++ G + + + + ++ ++G +A C
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--------CIEKA 401
Query: 64 N--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
N Y++LI + K F +V+ L S +S G+ P+ Y + I + +
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E D+ + + G + + +++ ++GI P F++L+ +Y K
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 182 GHFEKMSAVMEYMQK 196
G+ S ++ MQ+
Sbjct: 522 GNMAAASDLLLDMQR 536
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 4/314 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A F+ M+++G + ++++A++ + ++G +A + T PDV Y+ L
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT-GVVPDVFLYNSL 667
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K +K L +M GI PN V YNTLI+ + + ++ +D
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MS 188
PDV T + + + SG + K +++ S GI P + IL+D GK G+ EK +S
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E QK S + +N +ID+F + G + + LF M +++ P+ VT L+ AY
Sbjct: 788 LFHEAQQKSVGSLS--AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G A E+ + ++ +I+ +T+ + L+ +Y ++ +M + + M+ RG D
Sbjct: 846 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905
Query: 309 VTYRTMVRAYSTNG 322
+ Y M AY G
Sbjct: 906 IAYGVMASAYCKEG 919
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 149/317 (47%), Gaps = 2/317 (0%)
Query: 19 VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFA 78
+++ C N ++ A + ++G D+A + + M PD +TY++L+ K
Sbjct: 268 MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK-GLGPDGHTYTLLVDGFCKQKR 326
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ + + M + G+ PN TY LID + + E +M++ + +V T N
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ +G++ + + AG++P T+N+L+D Y K+ K ++ M+
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ + TY+++I + DL++ + M +KP+ +L++AY + E
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L+ + + ++ D +NCL+ R K E K +L M ++G KP+ TY + Y
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566
Query: 319 STNG-MKNHAKEFQDLV 334
S +G ++ + F+D++
Sbjct: 567 SKSGEIQVAERYFKDML 583
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 5/339 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K + KA LF M+ G + +T ++ L+ Y +S KA LL MK P
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-ARKLTP 449
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TYS+LI + K +L M G++PN Y TLI AY + + EM + L
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY-EMAIEL 508
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+K M++ PD++ NC + + +++ + GI+P+ +T+ ++ Y K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + + M V Y I+I G+ + F+ M + + P
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628
Query: 241 LCSLVRAYGHAGKP-EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+++ + GK E +G L+F+ + ++ D +N L+ + + + + + M
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
G P+ V Y T++ G A+E D +E+ D
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +F + G + + +L+S + + G +KA L + M + P
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN-GINP 694
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ LI K K + L ++ + + P+ VTY+T+ID Y ++ E
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+S+ PD + + G G ++ + + Q + S++ FN L+DS+ K
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKH 813
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + IVTY I+IDA+G+A +++ E LF M + I P+ +T
Sbjct: 814 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 873
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
SL+ +Y G K+ S+ + ++ I D + + + AY
Sbjct: 874 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 915
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 141/357 (39%), Gaps = 37/357 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A EL + M+ G + + L+ R+ ++A LL M +P+ +TY
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-GEKGIKPNAHTYGA 561
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI----------DAYGRAKMFAEME 118
I K+ + DM + GI PN V Y LI +A K E
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 119 L-------------------------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
L +K L PDV+ N + F G I+
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ Y++ GI P+I +N L++ K G K + + +++ +VTY+ +ID +
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
++G+L + LF M S+ I P C L+ G G EK S+ + +
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
FN L+D++ + E + + + M + P+ VTY ++ AY M A++
Sbjct: 802 A-FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 857
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 149/337 (44%), Gaps = 4/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ EKA +L+ M+ G + N + L++ + G KA L + ++ D
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK-DLV 728
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +I K+ + L +M ++GI P+ Y LID G+ E L+
Sbjct: 729 PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL-EKALS 787
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + + N + +F G++ + ++ + P+I T+ IL+D+YGK
Sbjct: 788 LFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A E+ + M+ + +TY ++ ++ + G+ +M LF+ M + I +
Sbjct: 848 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ AY GK + +L I L+ F+ L+ + K + + +L M
Sbjct: 908 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ T T++ + +G ++ A + +++++
Sbjct: 968 KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 120/321 (37%), Gaps = 26/321 (8%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
S++ L SGL +A ++LE + T +P + L++ C + F
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTR--KPPLEILDSLVR-CYREFG--------- 168
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
N ++ ID + E + +SE P + N +R +
Sbjct: 169 -------GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ K Y A I P + T+ ++ ++ K G K V+ M+K + TYN
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYN 280
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I + G + + + +LM + + P T LV + + ++ + + +S
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + L+D + + E + + M RG K + VTY M+ + G
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG----- 395
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
E + +E +A PD
Sbjct: 396 -EMAKAMSLFNEMLMAGLEPD 415
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 45/348 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ ++ M +G + +F LL A + D+AF + E MK C+PD TY+I
Sbjct: 59 DNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKK-KHCEPDEYTYTI 117
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I+ + D+ AL +M +G PN + YNT+I A ++M + L KM+ ++
Sbjct: 118 MIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKN 177
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P+ +T + L GQ+ ++K E K+ + I + L+ + K GH
Sbjct: 178 CRPNEFTYSVILTLLAAEGQLHKLDKVVELSRKYMNRSI------YAYLVRTLNKLGHAS 231
Query: 186 KMSAVMEYMQKYH-----------------------------------YSWTIVTYNIVI 210
+ + M YH + + YN V
Sbjct: 232 EAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVF 291
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
A GR + + L+ M+ + P T L+ ++G AGK + + ++NSD
Sbjct: 292 TALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCK 351
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
D + +N L++ G+ E MQ++G PD VTY T++ +
Sbjct: 352 PDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECF 399
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 149/356 (41%), Gaps = 33/356 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M G+ + +++ LF+ M+++GC N ++ ++ A S + DK L M +C+
Sbjct: 121 MTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMME-KNCR 179
Query: 61 PDVNTYSI---LIKSCLKAFAFDKVQALLSDMSTQGIRPNTV-TYNTLIDAYGRAKMFAE 116
P+ TYS+ L+ + + DKV L + I V T N L A ++F
Sbjct: 180 PNEFTYSVILTLLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCN 239
Query: 117 M--------ELTLVKMLSEDCEP--------------------DVWTMNCTLRAFGNSGQ 148
M + ML C D N A G Q
Sbjct: 240 MWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQ 299
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I + YEK + G P I T+NIL+ S+G+AG + + E ++ I++YN
Sbjct: 300 ISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNS 359
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I+ G+ GDL + FR M+ + + P VT +L+ +G K E + +
Sbjct: 360 LINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG 419
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ V +N L+D R AE + ++Q+G PD +TY + R S + K
Sbjct: 420 CFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRK 475
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 5/309 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N ++ L+ AY RS D F + MK D+ +++L+ + K D+ +
Sbjct: 41 NGYTYKCLVQAYLRSCDSDNGFRVYLEMKR-KGYTLDIFAFNMLLDALAKDQKVDQAFKV 99
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
DM + P+ TY +I GR E +ML++ C P++ N ++A N
Sbjct: 100 FEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALAN 159
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
S +D + K +P+ T++++L G K+ V+E +KY + +I
Sbjct: 160 SRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVELSRKY-MNRSIYA 218
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++ + G + LF M S + S++ + +AGK + +L I
Sbjct: 219 Y--LVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIH 276
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I DT+ +N + A GRLK + + + E M+ G PD TY ++ ++ G
Sbjct: 277 EKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVY 336
Query: 326 HA-KEFQDL 333
A K F++L
Sbjct: 337 EAIKIFEEL 345
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 15/334 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK+H ++DE S ++ Y GL D+A LLE + + P ++ +I
Sbjct: 453 EKSH----ILLDE------HSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISA-AI 501
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K F+ L G + + + YN +I AYG+A+++ + L M +
Sbjct: 502 IDAYAEKGLWFEAESIFLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRG 561
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T N ++ F +D + + Q G +P+ TF+ ++ SY + G
Sbjct: 562 TWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAV 621
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + M + Y ++++ F G ++ FRLM I + + L SL++A+
Sbjct: 622 EVYDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAF 681
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G E + + N + DT+ N +++ Y L +E K V E +++RG D
Sbjct: 682 SKVGSLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGY-ADG 740
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
V++ TM+ Y GM + A E + E+M E+ L
Sbjct: 741 VSFATMIYLYKNIGMLDEAIE---VAEEMKESGL 771
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 8/278 (2%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+TY+ LI KA + +M T GI +T+T+NT+I G AE E L+K
Sbjct: 322 STYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLK 381
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD T N L + N G ID KCY + + G+ P + T LL +
Sbjct: 382 MEERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNM 441
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTLC 242
E + V+ M+K H + VI + G L + + L R + + P
Sbjct: 442 VEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRIS--A 499
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIM---LDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+++ AY G + S+ F+ D+ D + +N ++ AYG+ + + + + + M
Sbjct: 500 AIIDAYAEKGLWFEAESI--FLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSM 557
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ RG PD+ TY ++++ +S + + A+ +++M
Sbjct: 558 KNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRM 595
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+++ + + K+ D P+V Y+I++++ +A +D+++ ++M+ G+ P TY
Sbjct: 141 WERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTYG 200
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LID YG+ + E L + M PD TMN +R ++G+ D+ +K Y+ +
Sbjct: 201 MLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFDSADKFYKDWCRG 260
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV------------------ 204
++ + N ++ +G +++ +E + H+ T +
Sbjct: 261 LVELNDFDLNSRVEDFG-------VNSAVEPITPKHFCXTELFRIGTRIPNRKVSPEVDN 313
Query: 205 ---------TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
TYN +ID +G+AG LK +F M + I +T +++ G G
Sbjct: 314 CVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLA 373
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAY-------GRLKCFAEMKGVLEVMQQRGCKPDK 308
+ ++L ++ + DT +N + Y G LKC+ ++ V G PD
Sbjct: 374 EAETLLLKMEERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREV-------GLFPDV 426
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
VT+R ++ S +N ++ ++++ +M+++ + +
Sbjct: 427 VTHRALLHVLSE---RNMVEDVENVIAEMEKSHILL 459
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 2/293 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + + ++ AYG++ L++KAF L + MKN PD TY+ LI+ D+
Sbjct: 526 GKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNR-GTWPDECTYNSLIQMFSGGDLVDE 584
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ LL++M G +P T++ +I +Y R + ++ M+ D EP+ +
Sbjct: 585 ARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVN 644
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F GQ + K + + +GI + L+ ++ K G E + M+
Sbjct: 645 GFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGA 704
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ N +I+ + G + + + +F +R ER V+ +++ Y + G ++ V
Sbjct: 705 DTIASNSMINLYADLGMVSEAKQVFEDLR-ERGYADGVSFATMIYLYKNIGMLDEAIEVA 763
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ S ++ D F +++ Y E +L M R PD T+ +
Sbjct: 764 EEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVL 816
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 118/291 (40%), Gaps = 21/291 (7%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+ ++ ++ + M + G ++ L+ YG+ GL +A ++HM P
Sbjct: 171 LGQAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHM-TVRGIFP 229
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG--------RAKM 113
D T + +++ A FD D + N N+ ++ +G K
Sbjct: 230 DEVTMNTVVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKH 289
Query: 114 FAEMELTLV--KMLSEDCEPDV----------WTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
F EL + ++ + P+V T N + +G +G++ + + +
Sbjct: 290 FCXTELFRIGTRIPNRKVSPEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLT 349
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
GI TFN ++ + G GH + ++ M++ S TYNI + + G++
Sbjct: 350 TGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANDGNIDG 409
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
+R +R + P VT +L+ E + +V+ ++ S I+LD
Sbjct: 410 ALKCYRRIREVGLFPDVVTHRALLHVLSERNMVEDVENVIAEMEKSHILLD 460
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 135/359 (37%), Gaps = 43/359 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L M G Q+F+A++++Y R GL A + + M + D +P+ Y +
Sbjct: 583 DEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHA-DVEPNEILYGV 641
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + ++ M GI N + +LI A+ + + +M + +
Sbjct: 642 LVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNME 701
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D N + + + G + ++ +E + G + +F ++ Y G ++
Sbjct: 702 DGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADGV-SFATMIYLYKNIGMLDEAI 760
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV--- 245
V E M++ ++ VI+ + G +++ L M + ++ P T L
Sbjct: 761 EVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTIL 820
Query: 246 --------------------RAYG--------------HAGKPEKLGSVLRFIDNSDIML 271
+ Y HA E + L+ +++ L
Sbjct: 821 KKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLK----AEVQL 876
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D+ +N + AYG + + + M+ + KPD VTY +V Y GM K+
Sbjct: 877 DSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 35/310 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E+A + F+ M G N T+L+ A+ + G + A + MKN D + +
Sbjct: 651 QAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGADTIASN 710
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +I + + + D+ +G + V++ T+I Y M E +M
Sbjct: 711 S-MINLYADLGMVSEAKQVFEDLRERGY-ADGVSFATMIYLYKNIGMLDEAIEVAEEMKE 768
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK------ 180
D + + + +GQ+ + + + + P TFN+L K
Sbjct: 769 SGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTILKKGVIPLE 828
Query: 181 -------AGHFEK-------MSAVMEYMQ-------------KYHYSWTIVTYNIVIDAF 213
A H EK ++AV + K YN+ I A+
Sbjct: 829 AVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLKAEVQLDSFAYNVAIYAY 888
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
G A + + +F M+ + +KP VT +LV YG AG E + + + +I L+
Sbjct: 889 GAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNK 948
Query: 274 VFFNCLVDAY 283
F +++ +
Sbjct: 949 SLFFAIINTF 958
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 37/248 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F+ + + G A+ SF ++ Y G+ D+A + E MK + + D ++ +
Sbjct: 724 EAKQVFEDLRERGY-ADGVSFATMIYLYKNIGMLDEAIEVAEEMKESGLLR-DATSFRKV 781
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-----------------DAYGRAK 112
I+ + LL +M T+ + P+ T+N L A+ K
Sbjct: 782 IECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTILKKGVIPLEAVSQLESAFHEEK 841
Query: 113 MFAEMELTLV----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+A + L + + D + N + A+G + +ID +
Sbjct: 842 TYARQAIIAAVFSGLGLHASALESCDTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIF 901
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
K + ++P + T+ L+ YGKAG E + + ++ + +I+ F A
Sbjct: 902 MKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSA 961
Query: 217 G--DLKQM 222
DL QM
Sbjct: 962 DRYDLVQM 969
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+ + M + G + SF ++ Y +G + LL M T PD T+++
Sbjct: 757 DEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMV-TRKLLPDNRTFNV 815
Query: 69 L-------------IKSCLKAFAFDK-------VQALLSDMSTQG-------------IR 95
L + AF +K + A+ S + ++
Sbjct: 816 LFTILKKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLKAEVQ 875
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
++ YN I AYG A+ + +KM ++ +PD+ T + +G +G I+ +++
Sbjct: 876 LDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
Y + + I+ + + F +++++ A ++ + V + M+
Sbjct: 936 YSQLKYGEIELNKSLFFAIINTFRSADRYDLVQMVKQEMK 975
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 12/318 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQ 60
L + Q EKA +L M + GC + + AL+S Y ++ F +AF L M KN C
Sbjct: 20 LCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN--HCL 77
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+ ++ KA LL +M +G PN TYN +++ + E +
Sbjct: 78 PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM 137
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M PDV T N ++ ++D K + + P + ++ +++ K
Sbjct: 138 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 194
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + S +++ M + +VTY+ +ID F + G++++ L M +P+ V
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 241 LCSLVRA---YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
SL+ A GH GK E + L ++ D V +N +D + + + K V +
Sbjct: 255 YNSLLGALHRLGHIGKAEDM---LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 311
Query: 298 VMQQRGCKPDKVTYRTMV 315
M +RGC P+ +Y +V
Sbjct: 312 RMVERGCTPNASSYSMLV 329
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 5/320 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+D+ C + +F LL RS +KA LL MK C PD Y+ LI KA
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEM-GCVPDDAIYNALISGYSKAK 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
F + L++M P VTY ++D +A + L +M + C P+++T N
Sbjct: 60 DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ ++D +K E+ G P + T+N + K +++ +++ +
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC---DRVDEARKFLARM 176
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ +V+Y VI+ ++GDL + M + P VT SL+ + G+ E+
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+L + + V +N L+ A RL + + +L M++RG PD V+Y +
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 318 YSTNGMKNHAKE-FQDLVEK 336
AK F +VE+
Sbjct: 297 LCKAERVKKAKAVFDRMVER 316
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 8/281 (2%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
CQPD T++IL++ ++ +K + LL M G P+ YN LI Y +AK F +
Sbjct: 6 CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+ C P V T + +G+ K ++ + G P+I T+N++++
Sbjct: 66 KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM-EYLFRLMRSERIKPS 237
+ ++ ++E M Y +VTYN I + + + ++L R+ + P
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM----PVTPD 181
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
V+ +++ +G + +L + N D V ++ L+D + + G+L+
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M + GC+P+ V Y +++ A G H + +D++ +M+
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLG---HIGKAEDMLVEME 279
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 13/322 (4%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A +L M D+GC N ++ ++ D+A +LE M
Sbjct: 89 GLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA-VRGYF 147
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ IK K D+ + L+ M + P+ V+Y T+I+ ++
Sbjct: 148 PDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRM 204
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M + C PDV T + + F G+++ + G +P++ +N LL + +
Sbjct: 205 LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH K ++ M++ ++ +V+YN ID +A +K+ + +F M P+ +
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVL- 296
LV K ++L + ++ + ++D + + L+D + F E +
Sbjct: 325 YSMLVE---ELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFS 381
Query: 297 EVMQQRGCKPDKVTYRTMVRAY 318
+V+ ++ C+PD Y M+ ++
Sbjct: 382 KVLDEKICEPDVFFYNVMLDSH 403
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 7/336 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + ++A + M + S+T +++ +SG D A +L+ M N C P
Sbjct: 160 LCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNR-GCTP 215
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYS LI K ++ LL M G RPN V YN+L+ A R + E L
Sbjct: 216 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 275
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
V+M PDV + N + + ++ + +++ G P+ +++++L++ K
Sbjct: 276 VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK 335
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCVT 240
+ ++E ++ + I+ Y +++D + G + LF + E+I +P
Sbjct: 336 KELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ ++ + +K + + + + + V +N LV ++ + +L M
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMV 454
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
G PD VTY T+V A G A E F++ V+
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 48/338 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSF------------------------------- 30
L K ++ +KA +F MV+ GC N S+
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356
Query: 31 ----TALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
T LL + G FD+A +L + + C+PDV Y++++ S K DK +
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M + N VT+N L+ ++ E L+ M+ E PD T + A
Sbjct: 417 KQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+ + +E+ G P + T++ L+ E+ + + ++ I+ Y
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGY 535
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
A +GDL ++ L+ S+ ++P+ T + G K E LG D
Sbjct: 536 -----AENGSGDL-GLKLFVELIESD-VEPNARTFGKEIS--GKLVKAESLGKARGLFDR 586
Query: 267 S---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ D N L+D + + E + + M+Q
Sbjct: 587 AVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 45/365 (12%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+T +++ + + G DKA+S M + PDV
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR-ISPDV 231
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN-------------------------- 97
TYS +I + K A DK +L+ M G+ PN
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 98 ---------TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
VTYN+L+D + E M EPD+ T L+ + G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ M + GI P + FNIL+ +Y K ++ V M+++ + +VTY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA---YGHAGKPEKLGSVLRFID 265
VI ++G + F M E + P+ + SL+ + + K E+L +L +D
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL--ILEMLD 469
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I L+T+FFN ++ ++ + E + + ++M + G KP+ +TY T++ Y G +
Sbjct: 470 RG-ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMD 528
Query: 326 HAKEF 330
A +
Sbjct: 529 EATKL 533
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 1/325 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+QP++A + M +G + + ++ +L+ ++G +A + + M +PD+ T
Sbjct: 280 EQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIAT 338
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y L++ A ++ ALL M GI P+ +N LI AY + + E L KM
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P+V T + SG +D +E+ G+ P+I + L+ S ++
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K ++ M + +N +I + + G + + E LF LM +KP+ +T +L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y AGK ++ +L + + + D V +N L++ Y R+ + + + M G
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
P+ +TY +++ AKE
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKEL 603
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 2/333 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F +M G + + ++ LL Y G + +LL+ M P
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN-GIHP 369
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + ++ILI + K D+ + S M G+ PN VTY +I ++ + L
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E P++ + + + D E+ + GI + FN ++ S+ K
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + ++TY+ +ID + AG + + L M S +KP CVT
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y + + ++ + + +S + + + +N ++ + A K + + +
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 8/282 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
P V+TY ILI C +A D A L ++ +G R +T+ L+ K ++ M++
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLD 176
L +M C PDV++ L+ + + + + G P + ++ +++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF--GRAGDLKQMEYLFRLMRSERI 234
+ K G +K + M S +VTY+ +I A G+A D K ME L ++++ +
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD-KAMEVLTTMVKNG-V 262
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P+C+T S++ Y + +P++ L+ + + + D V +N L+D + E +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ + M +RG +PD TY T+++ Y+T G DL+ +
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 6/333 (1%)
Query: 1 MLGKCKQPEKAHELFQAM---VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++G C + + F A+ V +G +FT LL A ++
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 58 DCQPDVNTYSILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
C PDV + +IL+K C + + + ++ L ++D G P+ V+Y T+I+ + +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ T +ML PDV T + + A +D + G+ P+ T+N +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L Y + ++ ++ M+ +VTYN ++D + G + +F M +
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P T C+L++ Y G ++ ++L + + I D FN L+ AY + + E
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V M+Q G P+ VTY ++ +G + A
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 139/348 (39%), Gaps = 52/348 (14%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + A F+ M+DEG N +T+L+ + +DKA L+ M + C
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ SI+ C + + + L M G++PN +TY+TLID Y A E
Sbjct: 475 NTIFFNSIIHSHCKEGRVIES-EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S +PD T N + + ++D +++ S+G+ P+I T+NI+L
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL-- 591
Query: 181 AGHFEKMSAVMEYMQKYHYSWT---IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
H + +A E S T + TYNI++ + + +F+ +
Sbjct: 592 -FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL-------- 642
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
C+T D+ L+T FN ++ A ++ E K +
Sbjct: 643 CLT---------------------------DLQLETRTFNIMIGALLKVGRNDEAKDLFV 675
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
G P+ TYR M G L+E++D+ +M+
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQG----------LLEELDQLFFSME 713
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G N +++ L+ Y +G D+A LL M + +PD
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV-GMKPD 545
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI + D AL +M + G+ PN +TYN ++ + A + V
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 606 GITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 665
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + TY ++ + G L++++ LF M L
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLN 725
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR G+ + G+ L ID L+ + +D
Sbjct: 726 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 1/303 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S+ LL + G +A +LL M + C PDV Y+ +I K +
Sbjct: 143 GCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 202
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTYN+++ A +A+ + E L +M+++ P+ WT N +
Sbjct: 203 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 262
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + T ++L+ S K G ++ V + M +
Sbjct: 263 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 322
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +YNI+++ + G L M LF LM + I P T ++AY + G +K +
Sbjct: 323 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMII 382
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + D V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 383 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 442
Query: 321 NGM 323
+G+
Sbjct: 443 HGI 445
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-ME 118
P TY+IL+ C +A + A + G+R + + + L+ + AK E ++
Sbjct: 74 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 133
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ L + C PDV++ N L++ G SGQ D + + + + P + +N ++
Sbjct: 134 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTV-CSPDVVAYNTVI 192
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D + K G K + + M + +VTYN V+ A +A + + E R M ++R+
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEM 292
P+ T +L+ Y G+ ++ V + + I+ D V + L+ + YG++K E
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EA 309
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ V + M +G PD +Y M+ Y+T G
Sbjct: 310 RDVFDTMAMKGQNPDVFSYNIMLNGYATKG 339
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 34/223 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TPD 58
L K + +KA + MV++ N ++ L+ Y +G + +A + + M+ PD
Sbjct: 230 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 289
Query: 59 C-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
PDV +Y+I++ + L
Sbjct: 290 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 349
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI P+ T+N I AY M + + +M +PDV T + A G
Sbjct: 350 LMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 409
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
++D + + + G+ P +N L+ + G K +
Sbjct: 410 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGI 452
>gi|357450749|ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484699|gb|AES65902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 9/338 (2%)
Query: 1 MLGKCKQP---EKAHELFQAMVDEGCDA---NTQSFTALLSAYGRSGLFDKAFSL-LEHM 53
++ CK+ E A ++ M+ D N ++ Y G F A L L+
Sbjct: 405 LICSCKEAGLLEDAVGIYNQMMKSNADEKKLNKHIVCTMIDIYSVMGCFKDAEMLYLKLK 464
Query: 54 KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAK 112
K++ D+ YSI+++ ++A + + ++L D+ + I P+ ++ Y R
Sbjct: 465 KSSSPNSLDMIAYSIVVRMYVRAGSLEDACSVLDDIDKRPDIVPDVFLLRDMLRIYQRRN 524
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
M ++ K+L + D NC + + ID + + +++ G P+ T+N
Sbjct: 525 MVDKLAQVYYKILKDRLNWDQEFYNCVINCCARALPIDELSRLFDEMLQRGFMPNTFTYN 584
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++L+ +GKA F+K+ + +M K ++TYN +ID++G+ D + M R M+ +
Sbjct: 585 VMLNVFGKAKLFKKVRR-LYFMAKKQGLVDVITYNTIIDSYGKKKDFRNMSRTVRKMQFD 643
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
S S++ AYG + + SVL+ + S+ D +N +++ YG E+
Sbjct: 644 GFSVSLEAYNSMLDAYGKDSQMDAFRSVLKMMKESNCASDLYTYNIVINIYGEQGWIEEV 703
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
VL + + G +PD +Y T+++AY GM A E
Sbjct: 704 SDVLAELNECGLRPDLCSYNTLIKAYGIAGMVEEAVEL 741
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 36/298 (12%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV------------------------- 63
+++ ++ Y R+G + A S+L+ + PD PDV
Sbjct: 476 AYSIVVRMYVRAGSLEDACSVLDDIDKRPDIVPDVFLLRDMLRIYQRRNMVDKLAQVYYK 535
Query: 64 ----------NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM 113
Y+ +I C +A D++ L +M +G PNT TYN +++ +G+AK+
Sbjct: 536 ILKDRLNWDQEFYNCVINCCARALPIDELSRLFDEMLQRGFMPNTFTYNVMLNVFGKAKL 595
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
F ++ L M + DV T N + ++G M + K Q G S+ +N
Sbjct: 596 FKKVR-RLYFMAKKQGLVDVITYNTIIDSYGKKKDFRNMSRTVRKMQFDGFSVSLEAYNS 654
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
+LD+YGK + +V++ M++ + + + TYNIVI+ +G G ++++ + +
Sbjct: 655 MLDAYGKDSQMDAFRSVLKMMKESNCASDLYTYNIVINIYGEQGWIEEVSDVLAELNECG 714
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
++P + +L++AYG AG E+ +++ + + I D + L++A R F E
Sbjct: 715 LRPDLCSYNTLIKAYGIAGMVEEAVELIKEMRKNGIEPDQTTYTNLINALKRNDKFLE 772
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 119/239 (49%), Gaps = 2/239 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K +++ ++ + + + + + +++ R+ D+ L + M P+ TY++
Sbjct: 527 DKLAQVYYKILKDRLNWDQEFYNCVINCCARALPIDELSRLFDEMLQR-GFMPNTFTYNV 585
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ KA F KV+ L QG+ + +TYNT+ID+YG+ K F M T+ KM +
Sbjct: 586 MLNVFGKAKLFKKVRRLYFMAKKQGL-VDVITYNTIIDSYGKKKDFRNMSRTVRKMQFDG 644
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ N L A+G Q+D + + + + T+NI+++ YG+ G E++S
Sbjct: 645 FSVSLEAYNSMLDAYGKDSQMDAFRSVLKMMKESNCASDLYTYNIVINIYGEQGWIEEVS 704
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ + + + +YN +I A+G AG +++ L + MR I+P T +L+ A
Sbjct: 705 DVLAELNECGLRPDLCSYNTLIKAYGIAGMVEEAVELIKEMRKNGIEPDQTTYTNLINA 763
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 124 MLSEDCEPDV--WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+L+ D EP + N + A G + K + + P++ TF +L+ Y K
Sbjct: 74 ILASDSEPQLTYQIFNTLIYASSKRGLVKLTSKWFRMMLDCNVTPNVATFGMLMRLYQKN 133
Query: 182 GHFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ E+ VM +M+++ ++V Y+ +I + R G + E + LM E + +
Sbjct: 134 WNVEEAEFVMSHMKRF----SVVCESAYSSMITIYTRLGLYAKAESVVELMEKEVMVLNV 189
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSD--IMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
++ Y GK + VL ++ + + V +N ++ YG+ + M G
Sbjct: 190 ENWLVILNLYCQQGKMVEAERVLAIMEEEAGFCVENIVVYNTMITGYGKA---SNMDGAE 246
Query: 297 EVMQQRG--CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
V + G +PD+ +YR+M+ + G A+ + + ++++
Sbjct: 247 SVFLRLGGRIEPDETSYRSMIEGWGRAGNYEKARWYYEELKRL 289
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 2 LGKCKQPEKAHELFQAMV---DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
L K + E A L + ++ D Q F L+ A + GL M D
Sbjct: 57 LTKKQDWETAENLLRKIILASDSEPQLTYQIFNTLIYASSKRGLVKLTSKWFRMM---LD 113
Query: 59 CQ--PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C P+V T+ +L++ K + ++ + ++S M + + Y+++I Y R ++A+
Sbjct: 114 CNVTPNVATFGMLMRLYQKNWNVEEAEFVMSHMKRFSVVCES-AYSSMITIYTRLGLYAK 172
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGI-QPSINTFNIL 174
E + M E +V L + G++ E+ + AG +I +N +
Sbjct: 173 AESVVELMEKEVMVLNVENWLVILNLYCQQGKMVEAERVLAIMEEEAGFCVENIVVYNTM 232
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ YGKA + + +V + +Y +I+ +GRAG+ ++ + + ++
Sbjct: 233 ITGYGKASNMDGAESVFLRLGG-RIEPDETSYRSMIEGWGRAGNYEKARWYYEELKRLGF 291
Query: 235 KPSCVTLCSLVR 246
KPS L ++++
Sbjct: 292 KPSSSNLFTMIK 303
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 9/324 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +K E+ + M G + +F +++S ++ D AF + + M C
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLER-GCV 254
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMST--QGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD TYSI++ + +A D V +L M G T+N I A R+ F +
Sbjct: 255 PDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAK 314
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDS 177
L+ M+ P++ + N + SG +D K K +G +P + FN L+
Sbjct: 315 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 374
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ KAG + ++ M+ + +VTYN +ID + G LKQ + L + M++ KP
Sbjct: 375 FCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKP 434
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT +L+ Y G E+ S+ + D + +N ++ A+ + ++ +GV
Sbjct: 435 NVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVY 494
Query: 297 EVMQQRG--CKPDKVTYRTMVRAY 318
+ ++ + C PD +TYR ++ Y
Sbjct: 495 QQLKNKTSYCSPDAITYRILIDGY 518
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGC-DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK + A +L + M+D GC + F L+S + ++G +A LL MK C
Sbjct: 338 GLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNIC 397
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ LI K + + + LL +M G +PN VTY LI+ Y + M+ E E
Sbjct: 398 VPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAES 457
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF--QSAGIQPSINTFNILLDS 177
+M ++ C PD+ T N L AF +G + E Y++ +++ P T+ IL+D
Sbjct: 458 LFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDG 517
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-LFRLMRSERIKP 236
Y +A E+ +++ M +S TYN++I ++ +++ M + P
Sbjct: 518 YCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVP 577
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
S SLVR + G S+++ ++ ++D
Sbjct: 578 SASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 4/276 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ I KA DK +L +M GI P+ VT+ ++I +A +
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS--AGIQPSINTFNILLDSY 178
ML C PD T + L + ++DT+++ E Q+ AG + T N + +
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-LMRSERIKPS 237
++G F ++ M + +++YN VID ++G++ L R ++ S KP
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML-DTVFFNCLVDAYGRLKCFAEMKGVL 296
+ +L+ + AG+ + +L + +I + D V +N L+D + + K +L
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ MQ GCKP+ VTY ++ Y+ +GM A+ D
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFD 460
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 5/319 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQ 60
L K + + A ++F+ M++ GC ++ +++ +L R+ D +LEHM+ C
Sbjct: 232 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCV 291
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V T++ I + ++ F + +L M G PN ++YN +ID ++ +
Sbjct: 292 MEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKL 351
Query: 121 LVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-QPSINTFNILLDSY 178
KML S C+PDV N + F +G++ + + ++ I P + T+N L+D
Sbjct: 352 SRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQ 411
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G ++ +++ MQ +VTY +I+ + + G ++ E LF M ++ P
Sbjct: 412 SKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDI 471
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDN--SDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+T +++ A+ AG K V + + N S D + + L+D Y R + + +L
Sbjct: 472 ITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLL 531
Query: 297 EVMQQRGCKPDKVTYRTMV 315
+ M RG D TY ++
Sbjct: 532 QEMTARGWSCDSYTYNVLI 550
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI K+ D QALL M+ G PN VTY LID +A+ + T+
Sbjct: 10 VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ML CEPD+ T N + + ++D ++ G P+ T++ L+ +
Sbjct: 70 RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRR 129
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR----LMRSERIKPSC 238
++ ++ M +V Y I F A + Y R ++ S RI P
Sbjct: 130 RLDQARGLIREMILRGSVCNLVVYIDCIFGFCEA-RCQSSRYECRDGDEMIESGRI-PDV 187
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT + + AGK +K +L +D I D V F ++ + + V +
Sbjct: 188 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
M +RGC PD +TY M+ S + E + ++ M C+
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCV 291
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 138/352 (39%), Gaps = 46/352 (13%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA- 76
M G DA+ ++T L+ +SG D A +LL+ M + C P+V TY+ LI KA
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADA-GCAPNVVTYTALIDGLCKAR 59
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD---- 132
D +Q + M G P+ VTYN+LI A + L L +++ P+
Sbjct: 60 RPHDAIQT-VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 133 ----VWTMNCTLRAFGNS-GQIDTM-----------------EKCYEKFQS--------- 161
+W NC R + G I M C + QS
Sbjct: 119 STLVIW--NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGD 176
Query: 162 ----AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+G P + T+N + KAG +K ++E M + +VT+ +I +A
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID--NSDIMLDTVF 275
+ +F+ M P +T ++ A + + + VL + + +++
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
N + A R F K +L M + G P+ ++Y ++ +G + A
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 348
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 2/336 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ ++A EL + MV G N + T L+ + G +KAF L + + +
Sbjct: 303 GLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYK 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V+TY+ +I K ++ + LLS M QG+ PNT TY TLID + + F
Sbjct: 363 PNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL 422
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M E P+++T N + G +D + K G+Q T+ IL+ + +
Sbjct: 423 MDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ M K ++ I +Y +I F R +K+ E LF S + P+ T
Sbjct: 483 QADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKT 542
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ Y G + + + N D++ + L+ + + + + + M
Sbjct: 543 YTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMM 602
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+G P +VT T+ Y + A D +EK
Sbjct: 603 DKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 140/356 (39%), Gaps = 42/356 (11%)
Query: 6 KQPEKAHELFQAMV--------------------DEGCDANTQSFTALLSAYGRSGLFDK 45
K E+A+E+ Q MV ++G +TQ+ +L GL +
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEI 207
Query: 46 AFSLLEHMKNTPDCQ----PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
A ++ M CQ PD ++ +++ +C + + L+ M +G + T
Sbjct: 208 AENMFVEM-----CQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATC 262
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+IDA+ + + KM+ P+V + G I + E+
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322
Query: 162 AGIQPSINTFNILLDSYGKAGHFEK-MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
G +P++ T L+D K G EK ++ ++ Y + TY +I+ + + L
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF----- 275
+ E L M+ + + P+ T +L+ GH K+G+ +R + D+M F
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLID--GHC----KVGNFVRAYELMDLMGKEGFSPNIY 436
Query: 276 -FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+N ++D + E +L + G + D VTY ++ + N + F
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 1/253 (0%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
++ +M QG+ +T T N ++D + E V+M PD + + A
Sbjct: 176 MVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACC 235
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
N G++ EK G T +++D++ + G+ ++ M + + ++
Sbjct: 236 NMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVI 295
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV-LRF 263
+ +I+ + G +KQ L M KP+ T +L+ G EK + L+
Sbjct: 296 NFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKL 355
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ + + + +++ Y + + +L MQ++G P+ TY T++ + G
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 324 KNHAKEFQDLVEK 336
A E DL+ K
Sbjct: 416 FVRAYELMDLMGK 428
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 144/301 (47%), Gaps = 7/301 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ KQ ++L MV +GC ++ L+ +YGR+ + A + M+ C+
Sbjct: 347 ILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKA-GCE 405
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA + + M G+ P+T TY+ +I+ G+A A +
Sbjct: 406 PDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKL 465
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + K Y Q+AG +P T++I+++ G
Sbjct: 466 FCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 525
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G+ ++ A+ M++ ++ Y +++D +G+AG++++ ++ M + P+ T
Sbjct: 526 SGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPT 585
Query: 241 LCSLVRAYGHAGK-PEK---LGSVLRFIDNSDIMLDTVFFNCLVDAYGR--LKCFAEMKG 294
SL+ A+ + P+ L S+L N + T+ +C +A + C+ E+
Sbjct: 586 CNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMS 645
Query: 295 V 295
V
Sbjct: 646 V 646
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A +K P + D TY+ ++ +A F + LL M G +P VTYN LI
Sbjct: 321 ALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLI 380
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+YGRA + +M CEPD T + +G ++ + Y++ Q+AG+
Sbjct: 381 HSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLS 440
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GKAGH + M + +VTYNI+I +A + + L
Sbjct: 441 PDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKL 500
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+R M++ +P VT ++ GH+G ++ ++ + + + D + LVD +G+
Sbjct: 501 YRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGK 560
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ + M G P+ T +++ A+
Sbjct: 561 AGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAF 593
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ + C+P V T N + ++G + ++
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + + Q AG +P T+ L+D + KAG + + MQ S TY+++I+
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L + LF M + P+ VT ++ A + + R + N+ D
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V ++ +++ G E + + M+++ PD+ Y +V + G A E+
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEW 570
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 163/344 (47%), Gaps = 11/344 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ ++L + MV +GC N ++ L+ +YGR+ +A ++ M+ C+
Sbjct: 392 ILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEM-GCE 450
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D ++ M G+ P+T TY+ +I+ G++ +
Sbjct: 451 PDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRL 510
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + T + Y Q+AG +P T++I+++ G
Sbjct: 511 FCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGH 570
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIK--PS 237
G+ E+ AV M++ H+ Y +++D +G+AG++ K E+ ++R+ + P+
Sbjct: 571 CGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPT 630
Query: 238 CVTLCS-LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
C +L S +R + L +++ N + T+ +C +A + +M
Sbjct: 631 CNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEA----QSPYDMGFCC 686
Query: 297 EVMQQRGCKPDKVTYRTMVRA-YSTNGMKNHAKEFQDLVEKMDE 339
E+M G P ++M A +++H +F DL+ D
Sbjct: 687 ELMAVSG-HPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDR 729
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%)
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+K P D +TY+ ++ +A F + LL M G +PN VTYN LI +YGRA
Sbjct: 373 LKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRAN 432
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
E +M CEPD T + +G +D YE+ Q G+ P T++
Sbjct: 433 YLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYS 492
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
++++ GK+G+ + M IVTYNI+I +A + + L+R M++
Sbjct: 493 VMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNA 552
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
KP VT ++ GH G E+ +V + + + D + LVD +G+ +
Sbjct: 553 GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKA 612
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAY 318
M + G P+ T +++ A+
Sbjct: 613 WEWYHTMLRAGLLPNVPTCNSLLSAF 638
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 3/289 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++T ++ GR+ F LLE M CQP+V TY+ LI S +A + + +
Sbjct: 384 HTYTTMVGILGRAREFGAINKLLEQMVKD-GCQPNVVTYNRLIHSYGRANYLREALNVFN 442
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNS 146
M G P+ VTY TLID + +A F ++ +++ + + E PD +T + + G S
Sbjct: 443 QMQEMGCEPDRVTYCTLIDIHAKAG-FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + + + G P+I T+NIL+ KA +++ + MQ + VTY
Sbjct: 502 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTY 561
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+IV++ G G L++ E +F MR P LV +G AG EK +
Sbjct: 562 SIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLR 621
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ ++ + N L+ A+ R+ + +L+ M G P TY ++
Sbjct: 622 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 670
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TY T++ GRA+ F + L +M+ + C+P+V T N + ++G + + + +
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM 444
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
Q G +P T+ L+D + KAG + ++ E MQ+ S TY+++I+ G++G+L
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 504
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF M + P+ VT L+ A + + R + N+ D V ++ +
Sbjct: 505 SAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIV 564
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G E + V M+Q PD+ Y +V + G A E+
Sbjct: 565 MEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEW 615
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 5/305 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +++ M + G +T +++ +++ G+SG A L M + C P++ TY+ILI
Sbjct: 472 AMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQ-GCVPNIVTYNILI 530
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA + L DM G +P+ VTY+ +++ G E E +M
Sbjct: 531 ALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWV 590
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + +G +G ++ + Y AG+ P++ T N LL ++ + +
Sbjct: 591 PDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNL 650
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M + ++ TY +++ A M + LM + P+ L S+ A G
Sbjct: 651 LQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELM-AVSGHPAHAFLQSMPAA-GP 708
Query: 251 AGKP--EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + L + + D + +VD + E V EV Q+ PD
Sbjct: 709 DGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 768
Query: 309 VTYRT 313
V ++
Sbjct: 769 VKEKS 773
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 202 TIVTYNIVIDAFGRAGDLKQME-------YLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
T+ N IDA+ LKQ++ + L R T ++V G A +
Sbjct: 340 TLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREF 399
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ +L + + V +N L+ +YGR E V MQ+ GC+PD+VTY T+
Sbjct: 400 GAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTL 459
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ ++ G + A + E+M E L+ PD
Sbjct: 460 IDIHAKAGFLDVA---MSMYERMQEVGLS---PD 487
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 1/314 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A + + M++ GC N ++ L++ + + G D+A L M C P
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSP 304
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ILI K LL +M G PN +TYNTL+D+ ++ + +
Sbjct: 305 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 364
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML DC+P +T N + F GQ+D + ++ G P I T+NI++ +A
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 424
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ ++E M + +VTYN ++ +A + + ++ ++R+ VT
Sbjct: 425 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 484
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + +LR ++ + D V + L+ + + + M
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 544
Query: 302 RGCKPDKVTYRTMV 315
+GC P +TY ++
Sbjct: 545 KGCVPTVITYSIVI 558
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 1/315 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K Q + A+ELFQ M D GC + ++ ++S R+ D A LLE M C
Sbjct: 385 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA-GCP 443
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ ++ KA D+ + + G + VT +TLID +++ + E
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M PDV + F + Q+D + + G P++ T++I++D K
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ +++ M + + + Y VID ++ + L++LM+ P+ VT
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV + ++ +L +++ + DTV +N + D + + + + + M+
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683
Query: 301 QRGCKPDKVTYRTMV 315
RGC P Y ++
Sbjct: 684 SRGCSPTPFMYSLLL 698
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 153/374 (40%), Gaps = 39/374 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A+ L M G + + ++ +G D A M+ +C P V
Sbjct: 179 KARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR--NCAPSV 236
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+ + K+ +L DM G PN VTYNTLI+ + + E + +
Sbjct: 237 ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 296
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML C PDV+T N + + + K ++ G +P+ T+N L+DS K+G
Sbjct: 297 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 356
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM-------------- 229
+ + + M + + T+N++ID F + G L LF+LM
Sbjct: 357 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 416
Query: 230 ------RSERI---------------KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
R+ RI P VT S+V A + ++ V + N
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
LD V + L+D + + + + +L M++ G PD V Y ++ + + +
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 536
Query: 329 EFQDLVEKMDETCL 342
F E +D+ C+
Sbjct: 537 AF--FSEMLDKGCV 548
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 149/329 (45%), Gaps = 2/329 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ ++A++LF+ C ++ +++ L++ + ++ F +A+ LL+ M+ P
Sbjct: 146 KKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAV 204
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +IK D DM + P+ +TY L+DA ++ ++ L L M+
Sbjct: 205 YNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMI 263
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P+V T N + F G +D + + P + T+NIL+D Y K +
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 323
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ M KY +TYN ++D+ ++G L ++M KPS T ++
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ G+ + + + + + + D +N ++ R + + +LE M + GC
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 443
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
PD VTY ++V + A E +++
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L + M++ G + +T+++ +S +D+A+ L + MK T C P V TY++L+
Sbjct: 573 LLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQT-GCAPTVVTYNVLVDKL 631
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K D+ LL M + G P+TVTYN++ D + ++ + M S C P
Sbjct: 632 CKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTP 691
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSIN 169
+ + L ++D + +E+ AG + P I+
Sbjct: 692 FMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEIS 729
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 145/315 (46%), Gaps = 1/315 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M GC N ++ L++A+ R+G D A L+ M+ +P + T++ ++ KA
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG-GVRPSLVTFNTVVNGLCKAG 239
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ + + +M+ +G+ P+ V+YNTL+ Y +A E +M + PDV T
Sbjct: 240 RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFT 299
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ A +G ++ + + G++ + TF L+D + + G + M+ M++
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC 359
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
++V YN++I+ + + G + + L M ++ +KP VT +++ Y G +
Sbjct: 360 RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSA 419
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ R + ++ D + ++ L+ + + + E M Q G +PD+ TY T++
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479
Query: 318 YSTNGMKNHAKEFQD 332
+ G A D
Sbjct: 480 HCKEGNVQKALSLHD 494
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 140/307 (45%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L +M+ +G N ++ L+ A G ++A ++ C P+V TY+ L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ +A D + L+ M G+RP+ VT+NT+++ +A + +M E
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + N + + +G + + + G+ P + TF L+ + +AG+ E+ A+
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M++ T+ +ID F R G L + MR RI+PS V L+ Y
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ ++ ++ ++ + D V ++ ++ Y ++ + M ++G PD +T
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437
Query: 311 YRTMVRA 317
Y +++R
Sbjct: 438 YSSLIRG 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 151/352 (42%), Gaps = 19/352 (5%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A ++F M EG + S+ L+S Y ++G +A ++ M
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK-GVV 292
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + +A ++ AL+ M +G+R N T+ LID + R + L
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M +P V N + + G++D + + ++ G++P + T++ +L Y K
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M K +TY+ +I L LF M ++P T
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + G +K S+ + ++ D V ++ L+D + E + +L +
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLY 532
Query: 301 QRGCKPDKVTYR---------------TMVRAYSTNGMKNHA-KEFQDLVEK 336
PD + Y +++ +S G+ N A K +Q ++++
Sbjct: 533 YEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 115/297 (38%), Gaps = 20/297 (6%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A EL M +G + +++ +LS Y + G D AF L M
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK-GVV 432
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI+ + L M G++P+ TY TLID + + +
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC---------------YEKFQSAGIQ 165
+M+ + PDV T + + S + ++ YE
Sbjct: 493 HDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRT 552
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEY 224
+ LL + G + V + M H+ Y+++I R G++ K + +
Sbjct: 553 AEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSF 612
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+L+R P+ + SLVR G + +V++ + N + D L+D
Sbjct: 613 HKQLLRCG-FSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 168/341 (49%), Gaps = 8/341 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A+ + + V +G + ++ +L++ + + G D+A ++ + +
Sbjct: 304 GYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK-GLR 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + Y+ LIK + L+++M+ G PN TYN +I+ + ++
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +++ C PD++T N + + ++D+ + + S G+ P + T+N LL+ K
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG E++ + + M++ + I+TYNI++D+ +A + + L M+S+ +KP V+
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNS-DIMLDTVFFNCLVDAYG-RLKCFAEMKGVLEV 298
+L + G + + R ++ D+ T +N +V A+ +L MK + V
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK-LFSV 601
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M+ GC PD TYR ++ + M N + ++ L+E M++
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCK--MGNITQGYKFLLENMEK 640
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 143/320 (44%), Gaps = 14/320 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTYS 67
+AH+++ M D G ++ ++T + ++ ++ + ++ L ++N P+ C + Y
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTA---RPYAALRLLRNMPELGCDSNAVAYC 185
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++ + D + L +M + + P+ V +N L+ + + E E L K+L
Sbjct: 186 TVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR 245
Query: 128 DCEPDVWTMNCTLRAFGNSGQID---------TMEKCYEKFQSAGIQPSINTFNILLDSY 178
P+++T N ++ G +D E+ K + G +P T+N ++D Y
Sbjct: 246 GVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGY 305
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G + + V++ + TY +I+ F + GD + +F+ + ++PS
Sbjct: 306 CKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSI 365
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
V +L++ G ++ + + + + +N +++ ++ C ++ +++
Sbjct: 366 VLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDD 425
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
+GC PD TY T++ Y
Sbjct: 426 AIAKGCPPDIFTYNTLIDGY 445
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 133/332 (40%), Gaps = 36/332 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E + MV+ G + + ++ +++ Y + G+ A +L+ +PD TY L
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV-FKGFKPDEFTYCSL 336
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K D+ A+ D +G+RP+ V YNTLI + + + +M C
Sbjct: 337 INGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGC 396
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++WT N + G + + + G P I
Sbjct: 397 LPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDI--------------------- 435
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
TYN +ID + + L + M S+ + P +T +L+
Sbjct: 436 --------------FTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLC 481
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AGK E++ + + ++ + + +N +VD+ + K E +L M+ +G KPD V
Sbjct: 482 KAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVV 541
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
++ T+ + G + A + +EK + C
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVC 573
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 39/301 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M + GC N ++ +++ + G A L++ C PD+ TY+ LI
Sbjct: 384 ALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI-AKGCPPDIFTYNTLI 442
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D +++ M +QG+ P+ +TYNTL++ +A E+ M + C
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + + + +++ + +S G++P + +F L + K G + +
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562
Query: 191 MEYMQK-YHYSWTIVTYNI-----------------------------------VIDAFG 214
M+K Y T TYNI VID F
Sbjct: 563 FRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFC 622
Query: 215 RAGDLKQMEYLFRLMRSE-RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G++ Q Y F L E R PS T ++ K + ++ + I+ +T
Sbjct: 623 KMGNITQ-GYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Query: 274 V 274
V
Sbjct: 682 V 682
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 14/295 (4%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
KA + K+ + +TY +++ F++++ LLS+M N +
Sbjct: 22 KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN--VNNALLEGAY 79
Query: 105 IDA---YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
I+A YGR E T +M +C+P V + N + G + K Y + +
Sbjct: 80 IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
G+Q + T+ I + S+ K ++ M + V Y V+ +G+
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAG---KPEK-LGSVLRFIDNSDIMLDTVFFN 277
LF M + + P V LV G + E+ LG VL+ ++ +F
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259
Query: 278 CL-----VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
L +D R E + L M G +PD +TY +++ Y GM A
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+ E+F+AM ++GC N ++ ++ + ++ ++A LL MK + +
Sbjct: 479 GLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMK-SKGLK 537
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYG-RAKMFAEME 118
PDV ++ L K D L M Q + T TYN ++ A+ + M M+
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L V M + C+PD +T + F G I K + PS+ TF +L+
Sbjct: 598 LFSV-MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 5/220 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ +A +L M +G + SF L + + + G D A+ L M+ D
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH 574
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY+I++ + + + L S M G P+ TY +ID + + + L
Sbjct: 575 TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFL 634
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ + + P + T L ++ GI P T N + ++ K
Sbjct: 635 LENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNTIFEADKKV 692
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
K+ V + ++K H ++ TY ++ D LK+
Sbjct: 693 VAAPKI-LVEDLLKKGHIAY--YTYELLYDGIRDKKILKK 729
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 11/328 (3%)
Query: 7 QPEKAHE---LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
Q KA E L + MV +GC + ++ A+++ + G D A +LL M+ + DV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADV 250
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELT 120
Y+ +I K D L + M T+GI+P+ TYN LI YGR +++
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR---WSDASRL 307
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY-EKFQSAGIQPSINTFNILLDSYG 179
L ML ++ PD+ N + AF G++ EK Y E +S P + +N L+ +
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K E+ V M + VTY +I F +A D + +F+ M S+ + P +
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + G E V ++ D+ LD V + +++A + + + +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G KP+ VTY TM+ + G+K A
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 43/341 (12%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +P+ A L M +A+ + ++ + D AF L M+ T +
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME-TKGIK 282
Query: 61 PDVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ LI SCL + + LLSDM + I P+ V +N LIDA+ + E E
Sbjct: 283 PDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 120 TLVKML-SEDCEPDVWTMNCTLRAF----------------------GNS---------- 146
+M+ S+ C PDV N ++ F GN+
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 147 ---GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
D + +++ S G+ P I T+NILLD G+ E V EYMQK I
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTY +I+A +AG ++ LF + + +KP+ VT +++ + G E+ ++
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + ++ +N L+ A RL+ E + + R C
Sbjct: 522 MKEDGPLPNSGTYNTLIRA--RLRDGDEAASAELIKEMRSC 560
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 2/311 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N ++ TYSI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSI 115
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I + A+L M G P+ VT N+L++ + +E + +M+
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD T + + E+ G QP + T+ +++ K G +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K +V YN +ID + + LF M ++ IKP T L+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL-EVMQQRGCKPD 307
+ G+ +L + +I D VFFN L+DA+ + E + + E+++ + C PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 308 KVTYRTMVRAY 318
V Y T+++ +
Sbjct: 356 VVAYNTLIKGF 366
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 143/318 (44%), Gaps = 4/318 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q A + M+ G + + +LL+ + +A +L++ M QPD T+
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM-GYQPDTVTF 183
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-KML 125
+ L+ + + AL+ M +G +P+ VTY +I+ + + ++ L L+ KM
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-RGEPDLALNLLNKME 242
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E DV N + +D + K ++ GI+P + T+N L+ G +
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTLCSL 244
S ++ M + + + +V +N +IDAF + G L + E L+ +++S+ P V +L
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
++ + + E+ V R + ++ +TV + L+ + + + + V + M G
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 305 KPDKVTYRTMVRAYSTNG 322
PD +TY ++ NG
Sbjct: 423 HPDIMTYNILLDGLCNNG 440
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 125/308 (40%), Gaps = 12/308 (3%)
Query: 31 TALLSAYGRSGL-FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
T LL R+ L ++++F+ ++ DC+ + L + L+ D L DM
Sbjct: 17 TVLLKGNPRTTLCWERSFA----GASSDDCREN------LSRKVLQDLKLDDAIGLFGDM 66
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
P+ V ++ L+ A + F + +M + +++T + + F Q+
Sbjct: 67 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQL 126
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
K G PSI T N LL+ + + A+++ M + Y VT+ +
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+ + + L M + +P VT +++ G+P+ ++L ++ I
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
D V +N ++D + K + + M+ +G KPD TY ++ G + A
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 330 -FQDLVEK 336
D++EK
Sbjct: 307 LLSDMLEK 314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A +F+ MV +G + ++ LL +G + A + E+M+ D + D+ TY+
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTT 466
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I++ KA + L +S +G++PN VTY T++ + R + E + V+M +
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
P+ T N +RA G + ++ +S G +TF ++
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ E+ E+F+ M G NT ++T L+ + ++ D A + + M + PD+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDI 426
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+ + + M + ++ + VTY T+I+A +A +
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + +P+V T + F G + + + + + G P+ T+N L+ + + G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ +++ M+ ++ T+ +V +
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTN 574
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 149/330 (45%), Gaps = 9/330 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L++ M T +F L+SA G + A + + M + C+P+ + IL++
Sbjct: 140 LYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKM-SEKGCKPNEFSLGILVRGY 198
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A LL +M + G PN V YNT+I + E E + KM PD+
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQ---SAGI-QPSINTFNILLDSYGKAGHFEKMSA 189
T NC + A SGQI + + Q G+ +P+ T+N++L+ + G FE+ A
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M K + ++ +YNI + R+G L + + M + IKP+ + LV
Sbjct: 319 IFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G S+L + S + DTV ++ L+ Y R E VL M Q GC P+
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T ++ + G A E +DL++ M+E
Sbjct: 438 TCNILLHSLWKEG---RASEAEDLLQMMNE 464
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 149/355 (41%), Gaps = 40/355 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
P+ H L Q ++ + D S +L+ GL + A S +++ P P ++
Sbjct: 62 HPQIDH-LHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L + LK D V L DM+ ++P T T+N LI A KM
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ C+P+ +++ +R + +G ++ +S+G P+ +N ++ S G
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----IKPSCVTL 241
+ ++E M++ S IVT+N I A ++G + + +FR M+ + KP+ VT
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDI---------MLDTV------------------ 274
++ + G E+ ++ + NS+ ML V
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360
Query: 275 -------FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N LV + F++ + +L +M++ G PD VTY T++ Y G
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 37/343 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F +M + + +S+ + RSG +A +L M + +P++ +Y+I
Sbjct: 314 EEARAIFDSMKNSET-LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK-NIKPNLYSYNI 371
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K F +++L M G+ P+TVTY+TL+ Y R E L +M+
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+++T N L + G+ E + G T N +++ KAG+ +K
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491
Query: 189 AVMEYMQKYHYSWT-----------------------------IVTYNIVIDAFGRAGDL 219
++ M WT +TY +I + G +
Sbjct: 492 EIVSGM------WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + M +++ P + + + Y GK VL+ ++ +N L
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ G E+ G+++ M++RG P+ TY ++ S G
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGG 648
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-------- 53
L K + +A +L Q M + G + + +++ ++G DKA ++ M
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASL 505
Query: 54 --------------KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
N C PD TY+ +I K D+ + L +M + + P+++
Sbjct: 506 GNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSL 565
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
++T I Y + + L +M + C + T N ++ G+ QI + ++
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI P++ T+N ++ + G + + +++ M + S I T+ I+I AF +A D
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685
Query: 220 KQMEYLFRLMRS 231
+ LF + S
Sbjct: 686 GAAQELFEIALS 697
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + N R ++D + Y+ A ++P TFN+L+ + + G+ E V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV---TLCSLVRA 247
+ M + + I++ + RAG L MRS P+ V T+ S +
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ---QRGC 304
G + EKL +R + S D V FNC + A + E + MQ + G
Sbjct: 236 EGQTVEAEKLVEKMREVGLSP---DIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292
Query: 305 -KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
KP+ VTY M+ + + GM A+ D
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFD 321
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
H I YN++ + + + +L++ M ++KP T L+ A G E
Sbjct: 113 HDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENA 172
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + + LV Y R + +L+ M+ G P++V Y T++ +
Sbjct: 173 REVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232
Query: 318 YSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
G E + LVEKM E L+ PD
Sbjct: 233 LCGEG---QTVEAEKLVEKMREVGLS---PDI 258
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 45/372 (12%)
Query: 5 CKQPE--KAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
C Q + +A +L + M + G C + ++ ++ + + G +KA L + M + P
Sbjct: 195 CNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP- 253
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TYS ++ + KA A DK +A L M +G+ P+ TYN LI Y + E
Sbjct: 254 --PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M + PDV +N + + G+I ++ G P + ++ I+L+ Y
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G M+ + + M + I T+N++I A+ G L + +F MR +KP
Sbjct: 372 ATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431
Query: 239 VTLCSLVRAYGHAGK-----------------PEKL------------GSVLRF------ 263
VT +++ A GK P+K GS+L+
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG- 322
I N+ + LD VFF +++ +L + + + ++ G PD V Y ++ Y G
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551
Query: 323 MKNHAKEFQDLV 334
M+ + F +V
Sbjct: 552 MEKALRVFDAMV 563
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 1/310 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFD 80
GC + S+ LL + G +A LL M + C PDV Y+ +I K +
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
K L +M +GI P+ VTY++++ A +A+ + E L +M+++ PD WT N +
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ ++GQ + +++ + I P + N L+ S K G ++ V + M +
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ +Y I+++ + G L M LF LM + I P T L++AY + G +K +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 418
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + V + ++ A R+ + M +G PDK Y +++ + T
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 321 NGMKNHAKEF 330
+G AKE
Sbjct: 479 HGSLLKAKEL 488
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 148/337 (43%), Gaps = 28/337 (8%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS--------------GLFDKAFSLLEH 52
+PE+AH+L + G + L+A R+ LF++A S
Sbjct: 46 RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAAS---R 102
Query: 53 MKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
+ P TY+IL+ C +A + A + G+R + + + L+ + AK
Sbjct: 103 AQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK 162
Query: 113 MFAE-MELTLVKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSI 168
E +++ L + C PDV++ N L++ G SGQ D + + + + P +
Sbjct: 163 RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-CSPDV 221
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++D + K G K + + M + +VTY+ V+ A +A + + E R
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGR 285
M ++ + P T +L+ Y G+ ++ V + + I+ D V N L+ + YG+
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+K E + V + M +G PD +Y M+ Y+T G
Sbjct: 342 IK---EARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 146/349 (41%), Gaps = 41/349 (11%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ++F M +G + + S+T +L+ Y G L + M PD
Sbjct: 340 GKIKE---ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD-GIAPD 395
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTL 121
+ T+++LIK+ DK + ++M G++P+ VTY T+I A R KM ME
Sbjct: 396 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME-KF 454
Query: 122 VKMLSEDCEPDVWTMNCTLRAF-----------------GNSGQIDTM------------ 152
+M+ + PD + +C ++ F N ++D +
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKL 514
Query: 153 ------EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+ ++ + G+ P +N+L+D Y G EK V + M +V Y
Sbjct: 515 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++ + + G + + LFR M + IKPS + ++ AG+ +
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
S I ++ ++ ++ + +CF E + + ++ K D +T TM+
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 683
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 1/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A E F M+D+G + ++ L+ + G KA L+ + N + D+ +
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGS 506
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K Q + G+ P+ V YN L+D Y + M+S
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
EP+V + + G+ID + + GI+PS +NI++D +AG
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M + + TY+IV+ + + +LF+ +R+ +K +TL +++
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ + I S ++ V ++ ++ + E + + MQ GC+PD
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746
Query: 309 VTYRTMVR 316
+VR
Sbjct: 747 RLLNHVVR 754
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 141/369 (38%), Gaps = 35/369 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PD 58
L K + +KA + MV++G + ++ L+ Y +G + +A + + M+ PD
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325
Query: 59 C-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLS 87
PDV +Y+I++ + L
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI P+ T+N LI AY M + + +M +P V T + A G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D + + + G+ P ++ L+ + G K ++ + IV +
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I+ + G + + +F L + + P V L+ Y GK EK V + ++
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
I + V + LV+ Y ++ E + M Q+G KP + Y ++ G A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 328 K-EFQDLVE 335
K +F ++ E
Sbjct: 626 KVKFHEMTE 634
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--------------- 53
EKA +F AMV G + N + L++ Y + G D+ SL M
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 54 --------KNTP---------DCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ P + +N TYSI+++ K FD+ L ++ +
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ + +T NT+I + + E + + P T + + G ++ E
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAED 732
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ Q+AG +P N ++ K + A + + + ++S +T +++D F
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 792
Query: 215 RAGDLK-QMEYL 225
G + Q+ +L
Sbjct: 793 SKGTCREQIRFL 804
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A LF MV+ G + +FT L+ Y + G DKA +L E M T + +
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLK 534
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA + + L DM + I P+ ++Y T+++ + + + E
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDS 177
+ML + P++ T N ++ + SG M K YE K S GI P ++N L+D
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGD---MPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y K + EK ++ M+K + I+TYN++++ F G +++ E + R M I P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFID 265
T SL+ GH + + + RF D
Sbjct: 712 GATYSSLIN--GHVSQ-DNMKEAFRFHD 736
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 153/330 (46%), Gaps = 4/330 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+F M G + SF++L+ R+G +A M+ + PD Y+IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS-GIVPDNVIYTIL 438
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + A + +M +G + VTYNT ++ + KMFA+ ++ +M+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD +T +R + G +D +E ++P T+N L+D + KAG +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M + ++Y V++ F +G L + L M + I+P+ VT +L++ Y
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G K L + ++ I+ D+ +N L+D Y + + ++ M++RG + + +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY ++ + G +E + ++ KM E
Sbjct: 679 TYNLILNGFCAEG---KMQEAEQVLRKMIE 705
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 13/348 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ + E FQ + +G + + LL R+G D A+ + + + +V
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG-GIELNV 257
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T +I++ + K F+ V LSDM +G+ + VTYNTLI+AY R + E L
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS 317
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
S EP + T N L G+ D + + G+ P+ T+N LL + +
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + + M + +V+++ +I R G L Q FR M I P V
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437
Query: 244 LVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ + G L L+ D +D V +N ++ + K FA+ + M
Sbjct: 438 LIDGFCRNG---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+RG PD T+ T++R Y +G + A +L E M T L +PD
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKA---LNLFEAMVRTNL---KPD 536
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 150/336 (44%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E M +G A+ ++ L++AY R GL ++AF LL ++ +P
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF-SSRGMEP 325
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ ++ K +D+ + +L +M G+ PN TYNTL+ R E +
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M PD+ + + + +G + + + + +GI P + IL+D + +
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M +VTYN ++ + + LF M + P T
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+R Y G +K ++ + +++ D V +N L+D + + K + + M +
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD-LVEK 336
+ PD ++Y T++ + ++G+ A D ++EK
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 143/346 (41%), Gaps = 38/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L + G + ++ A+L + G +D+A +L M P+ TY+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAATYNT 367
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR------AKM-FAEMELTL 121
L+ + + Q + +MS +G+ P+ V++++LI R A M F EME +
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 122 V----------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ +ML+ C DV T N L +
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + G+ P TF L+ Y K G+ +K + E M + + VTYN +ID F
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-KPEKLGSVLRFIDNSDIMLD 272
+AG++ + + L+ M + I P ++ +++ + +G PE L + ++ I +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPN 606
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V N L+ Y R + L M G PD +Y T++ Y
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
PE A L M+++G N + L+ Y RSG KA+ L M + PD +Y+
Sbjct: 589 PE-ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSFSYN 646
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI LK +K L+++M +G++ N +TYN +++ + E E L KM+
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + + + + + +++ G+ P
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT----LCSLVRAYGHAG 252
+++ + Y++++ + +A L++ F+++R + + S L LVR
Sbjct: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
E G V+R I L+ N +V+A + + F + L M+ +G D VTY
Sbjct: 241 AWEIYGEVVR----GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296
Query: 313 TMVRAYSTNGMKNHA 327
T++ AY G+ A
Sbjct: 297 TLINAYCREGLVEEA 311
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 7/303 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ PD TY
Sbjct: 131 KPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAY-GRAKMFAEMELTLVKM 124
+ LI K + + +M TQG + P+ V YN LI Y R K+ ++ M
Sbjct: 187 ATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYR-EDM 245
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ V T N + A G+ E+ Q G+ P + T+NIL++ Y K G+
Sbjct: 246 VQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNE 305
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+K V E M + T VTY +I AF R G +++ + LF++ + I+P V +L
Sbjct: 306 KKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNAL 365
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ ++ G E+ ++ ++ I D V +N L+ + L E +G+++ M +RG
Sbjct: 366 INSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGI 425
Query: 305 KPD 307
+PD
Sbjct: 426 QPD 428
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 35/326 (10%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKAFAFDKVQAL 85
T +F +L +G +A LL M +P+ TY+ +I C + +VQA
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP-----RPNAVTYNTVIAGFCARG----RVQAA 166
Query: 86 LSDMSTQ----GIRPNTVTYNTLIDAY---GR----AKMFAEMELTLVKMLSEDCEPDVW 134
L M GI P+ TY TLI + GR AK+F EM + + P
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEM------LTQGEVAPSAV 220
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
N + + + G++D + E G+ ++ T+N+L+ + G AV+E M
Sbjct: 221 MYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEM 280
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
Q+ S + TYNI+I+ + + G+ K+ +F M + ++ + VT SL+ A+ G+
Sbjct: 281 QRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQV 340
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVM---QQRGCKPDKVT 310
++ + + I D V +N L++++ C +M+ E+M +++ PD VT
Sbjct: 341 QETDRLFKVAVKKGIRPDVVMYNALINSH----CAGGDMERAFEIMAEMEKKRIPPDDVT 396
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y T++R + G + A+ D + K
Sbjct: 397 YNTLIRGFCLLGRLDEARGLIDEMTK 422
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ +KA E+F+ M +G A ++T+L+ A+ R G + L + + +
Sbjct: 298 GYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFK-VAVKKGIR 356
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ LI S ++ ++++M + I P+ VTYNTLI + E
Sbjct: 357 PDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGL 416
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M +PD+ +GQ D E ++ GI P +T+ L++ G
Sbjct: 417 IDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE--GL 466
Query: 181 AGHFEKMSA 189
E+MSA
Sbjct: 467 TTVDEQMSA 475
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 157/361 (43%), Gaps = 39/361 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L MV+ GC + ++ ++++ RSG A LL M+ + + DV TYS +I S
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSL 228
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D +L +M T+GI+ + VTYN+L+ +A + + L L M+S + P+V
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T N L F G++ + Y++ + GI P+I T+N L+D Y + + +++
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 194 MQKYHYSWTI-----------------------------------VTYNIVIDAFGRAGD 218
M + S I VTY+I++ F ++G
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
+K E LF+ M S + P +T L+ GK EK + + S + L V +
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+++ + + + + +G KP+ +TY M+ G E L+ KM+
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG---SLSEANILLRKME 525
Query: 339 E 339
E
Sbjct: 526 E 526
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M +G ++ ++ +L+ ++G ++ LL+ M + + P+V T+++
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNV 293
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ +K + L +M T+GI PN +TYNTL+D Y +E L M+
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T ++ + ++D K + G+ + T++IL+ + ++G +
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + ++TY I++D G L++ +F ++ ++ V +++
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK E ++ + + + + + ++ + +E +L M++ G P+
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533
Query: 309 VTYRTMVRAYSTNG 322
TY T++RA+ +G
Sbjct: 534 CTYNTLIRAHLRDG 547
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD T++ LIK + L+ M G +P+ VTYN++++ R+ +
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM + + DV+T + + + G ID +++ ++ GI+ S+ T+N L+
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG + + +++ M ++T+N+++D F + G L++ L++ M + I P+ +
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y + + ++L + + D V F L+ Y +K + V +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+RG + VTY +V+ + +G A+E FQ++V
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A LFQ M+ + F+ SA R+ F+ + ++ ++ T
Sbjct: 58 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTL 116
Query: 67 SILI----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+I+I + C FA+ ++L + G P+T T+NTLI +E + +
Sbjct: 117 NIMINCFCRCCKTCFAY----SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 172
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ C+PDV T N + SG K + ++ + T++ ++DS + G
Sbjct: 173 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M+ ++VTYN ++ +AG L + M S I P+ +T
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + GK ++ + + + I + + +N L+D Y +E +L++M +
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352
Query: 303 GCKPDKVTYRTMVRAY 318
C PD VT+ ++++ Y
Sbjct: 353 KCSPDIVTFTSLIKGY 368
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 39 RSGLFD----KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
RSG+ D A +L + M ++ P P + +S + + F+ V + G
Sbjct: 51 RSGIVDIKKDDAIALFQEMIRSRP--LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 108
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I N T N +I+ + R L K++ EPD T N ++ G++
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ G QP + T+N +++ ++G ++ M++ + + TY+ +ID+
Sbjct: 169 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + LF+ M ++ IK S VT SLVR AGK +L+ + + +I+ +
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN L+D + + E + + M RG P+ +TY T++ Y M+N E ++
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC---MQNRLSEANNM 345
Query: 334 VEKM 337
++ M
Sbjct: 346 LDLM 349
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELFQ MV G + ++ LL +G +KA + E ++ + + Y+ +I
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTII 470
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + L + +G++PN +TY +I + +E + L KM +
Sbjct: 471 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 530
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
P+ T N +RA G + K E+ +S G ++ +++D
Sbjct: 531 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/390 (18%), Positives = 140/390 (35%), Gaps = 62/390 (15%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + ++F+ + G AN +++ L+ + +SG A L + M + PDV T
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMT 430
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y IL+ +K + D+ + V Y T+I+ + + +
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +P+V T + G + K + G P+ T+N L+ ++ + G
Sbjct: 491 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 550
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY-----------LFRLMRSERI 234
+ ++E M+ +S + +VID A + Y L L SE+I
Sbjct: 551 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKI 610
Query: 235 KPSCVTL-----CSLVRAYGHAGKPEKLG----------------SVLRFIDNSDIM--- 270
+ S +T C+ + + E G SVL+ N D+
Sbjct: 611 RLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLV 670
Query: 271 --------LDTVFFNCLVDAY------------------GRLKCFAEMKGVLEVMQQRGC 304
L+ + +VD GR + + + M QRG
Sbjct: 671 TNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGI 730
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
P+ +TY +++ + + A + DL+
Sbjct: 731 APNTITYSSLIDGFCKENRLDEANQMLDLM 760
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 153/335 (45%), Gaps = 13/335 (3%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK A +L + M ++GC N ++ ++ + + L +A M + P
Sbjct: 54 GLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIP- 112
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PDV TYS ++ ++ +L M + + PN VT+ LID + +M +E
Sbjct: 113 --PDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M + EPDV+T N + + + Q+D +K + G P++ ++NIL++ +
Sbjct: 171 LVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGH 230
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K+G ++ ++ M + I TY+ ++ F + G ++ + L + M S + P+
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNL 290
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGV 295
+T ++ G ++ +L+ + S I + + L++ +G+L+ E+
Sbjct: 291 ITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSN 350
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L V +G +P VTY M+ G+ N A E
Sbjct: 351 LFV---KGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 1/305 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF+ MV+ N +FT L+ + + +A+ + E M +PDV TY+ L
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK-GLEPDVYTYNAL 191
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ D+ Q L + M +G PN +YN LI+ + ++ E + L +M +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD++T + +R F G+ ++ ++ S G+ P++ T++I+LD K GH ++
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ MQ+ I Y I+I+ G L+ LF + + I+P+ VT ++
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + + R + + + ++ +N ++ + R ++E M +G D
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431
Query: 310 TYRTM 314
T+R +
Sbjct: 432 TFRML 436
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 2/328 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F MV EG + +++++L + G ++A SL + M + P+ T++IL
Sbjct: 98 EAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNKVTFTIL 156
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K + + M+ +G+ P+ TYN L+D Y E + M + C
Sbjct: 157 IDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC 216
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V + N + SG+ID + + + P I T++ L+ + + G ++
Sbjct: 217 APNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ M Y ++TY+IV+D + G L + L + M+ +I+P+ L+
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK E + + I V + ++ + E + M GC P+
Sbjct: 337 TFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSC 396
Query: 310 TYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
TY +++ + NG N + +++V K
Sbjct: 397 TYNVIIQGFLRNGDTPNAVRLIEEMVGK 424
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 4/323 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G +F LLS A L + M +PDV TYS +I K
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMG 59
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
LL M +G +PN V YNT+ID+ + ++ E +M+ E PDV+T +
Sbjct: 60 NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L F N G+++ +++ + P+ TF IL+D K + V E M +
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ TYN ++D + + + + LF +M + P+ + L+ + +G+ ++
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+L + + + D ++ L+ + ++ E + +L+ M G P+ +TY ++
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 318 YSTNGMKNHAKEFQDLVEKMDET 340
+G H E +L++ M E+
Sbjct: 300 LCKHG---HLDEAFELLKAMQES 319
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ +A +F+ M ++G + + ++ AL+ Y D+A L M + C
Sbjct: 159 GLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIM-DRKGCA 217
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V +Y+ILI K+ D+ + LL++MS + + P+ TY+TL+ + + E +
Sbjct: 218 PNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M S P++ T + L G +D + + Q + I+P+I + IL++
Sbjct: 278 LKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCT 337
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E + + T+VTY ++I + G + LFR M P+ T
Sbjct: 338 FGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCT 397
Query: 241 LCSLVRAYGHAG 252
+++ + G
Sbjct: 398 YNVIIQGFLRNG 409
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ +P++A EL + M G N +++ +L + G D+AF LL+ M+ +
Sbjct: 262 MRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQES-K 320
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P++ Y+ILI+ + + L S++ +GI+P VTY +I + + E
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+M C P+ T N ++ F +G + E+ G +TF +L D
Sbjct: 381 ELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
Length = 643
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A S+ +H+ +P + TY+IL+ + F+ + +LL+ + GIRP+++ +N L
Sbjct: 90 QAHSVFKHLMEEGH-KPSLVTYTILLTALTNQRMFESIPSLLAQVELAGIRPDSIFFNAL 148
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG- 163
I+A+ AK E T KM C P T N ++ +G G+ + ++ ++ G
Sbjct: 149 INAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGIEGS 208
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
I+P++ T+NIL+ ++ + E+ V+ M+ IVTYN + A+ + + E
Sbjct: 209 IKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETWRAE 268
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
L +++ R++ S T ++ Y + E+ ++ + ++ I+ + V FN L+ +
Sbjct: 269 ELIVEIQT-RVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGF 327
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVE 335
+ A + +L +M+Q G KPD VTY + +S+ G M K F ++E
Sbjct: 328 LDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIE 380
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 150/342 (43%), Gaps = 4/342 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ +A F M GC T +F L+ YG G +++ + + M +P++
Sbjct: 154 EAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGIEGSIKPNL 213
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+K+ ++ ++ M G+ P+ VTYNT+ AY E +V+
Sbjct: 214 TTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETWRAEELIVE 273
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + T + + +++ +C ++ + AGI P++ FN LL +
Sbjct: 274 IQTR-VRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVND 332
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M+++ IVTY+ ++ F G + + +F M I+P
Sbjct: 333 MAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSI 392
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + + A +PEK +L + + + + V F ++ + + V E M + G
Sbjct: 393 LAKGFVRAKQPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSG 452
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
P+ T+ T++ YS A+E +++ M ET + K
Sbjct: 453 VYPNLRTFETLIWGYSEQKQPWKAEE---VLQMMRETGVKPK 491
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 2/275 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G + + ++ + SAY + +A L+ ++ + T+ I
Sbjct: 230 EEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETWRAEELIVEIQTR--VRTSERTWGI 287
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + ++ + M GI PN V +NTL+ + A + L M
Sbjct: 288 IIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQFG 347
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L F + G + K ++K AGI+P ++IL + +A EK
Sbjct: 348 IKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKAE 407
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M +VT+ VI + D++ ++ M + P+ T +L+ Y
Sbjct: 408 DLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFETLIWGY 467
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + + + + DA+
Sbjct: 468 SEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAW 502
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+RA +S + ++ G +PS+ T+ ILL + FE + +++ ++
Sbjct: 79 MRALIDSNKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGI 138
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +N +I+AF A + + F M+ P+ T +L++ YG GKPE+
Sbjct: 139 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 198
Query: 260 VLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V + I + +N LV A+ + E GV+ M+ G +PD VTY T+ AY
Sbjct: 199 VFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAY 258
Query: 319 STNGMKNHAKEF 330
+ N A+E
Sbjct: 259 ANNDETWRAEEL 270
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 1/230 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ ++ Y R ++A ++ MK+ P+V ++ L+K L V +L
Sbjct: 283 RTWGIIIGGYCRESRLEEALRCVQQMKDA-GIVPNVVIFNTLLKGFLDVNDMAAVNNILG 341
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI+P+ VTY+ ++ + A+ KM+ EPD + + F +
Sbjct: 342 LMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAK 401
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q + E + G+ P++ TF ++ + E V E M K + T+
Sbjct: 402 QPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFE 461
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+I + + E + ++MR +KP T + A+ G E +
Sbjct: 462 TLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAWKAVGLIENI 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 9/225 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTP 57
G C++ E+A Q M D G N F LL + + L+E
Sbjct: 291 GYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQF---- 346
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+PD+ TYS + + K + M GI P+ Y+ L + RAK +
Sbjct: 347 GIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKA 406
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E L++M P+V T + + + +++ + YEK +G+ P++ TF L+
Sbjct: 407 EDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFETLIWG 466
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
Y + K V++ M++ T+ ++ DA+ G ++ +
Sbjct: 467 YSEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAWKAVGLIENI 511
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA L M +EG ++ ++ RSG + A M+ PD+ TY+
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM-GLLPDLITYNS 377
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + L D+ G+ P+ +TYN L+D Y R E +M+ +
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+PDV T + + + + +++ S G+QP +N + + G +
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E M S VTYNI +D ++G+LK L+ M S+ ++P C+T L+ A+
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAH 557
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + + + S + V + + AY R G + M + G +P++
Sbjct: 558 CERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNE 617
Query: 309 VTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
VTY ++ A G N A + F +++E+
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLER 646
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 35/354 (9%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-CQPDVNTYSILIKS 72
++ M+ G + + ++ LL ++ R G D+A LL M+ P C P TY+++I
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277
Query: 73 CLK---------------------AFAF-------------DKVQALLSDMSTQGIRPNT 98
+ AF F +K AL +M +GI P
Sbjct: 278 LARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTV 337
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
VTYNT+I R+ + V+M + PD+ T N + + +G + +
Sbjct: 338 VTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGD 397
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
+ AG+ PS+ T+NILLD Y + G E+ + M + + TY I+++ + +
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L + F M S+ ++P C + + A G + + + + I DTV +N
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+D + + + M G +PD +TY ++ A+ G A++ D
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFD 571
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKM 113
P + ++++++ +D ++++ ++M GI P+ VTYNTL+D++ R AK+
Sbjct: 194 PFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKL 253
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
EME C P T N + G+++ + ++ + + + S TFN
Sbjct: 254 LREMEAR-----PGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNP 307
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+ Y G EK A+ M+ T+VTYN +I R+G+++ F MR+
Sbjct: 308 LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMG 367
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+ P +T SL+ Y AG ++ + + + + + +N L+D Y RL E +
Sbjct: 368 LLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEAR 427
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA--KEFQD--LVEKMDETCLA 343
+ M ++GC+PD TY ++ + ++N A +EF D L + + C A
Sbjct: 428 RFKQEMVEQGCQPDVSTYTILMNG--SRKVRNLAMVREFFDEMLSKGLQPDCFA 479
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 6/335 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A LF + G + ++ LL Y R G ++A + M CQ
Sbjct: 381 GYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ-GCQ 439
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
PDV+TY+IL+ K V+ +M ++G++P+ YNT I A +E +L
Sbjct: 440 PDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQL 499
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
T V M+S D T N L SG + + K S G+QP T+ L+ ++
Sbjct: 500 TEV-MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G + + + M + VTY + I A+ R G+L F+ M E ++P+ V
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ A G+ + + + + L+D + + E + M
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
Q G PD T+ + + + G HA ++ + V
Sbjct: 679 HQHGIHPDHCTHNALFKGFD-EGQSKHAIQYMENV 712
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M P + N LRA + + D M Y + GI+PSI T+N LLDS+ + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 183 HFEKMSAVMEYMQKYHYSW--TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ + ++ M+ + VTYN+VI+ R G+L++ L MR + K S T
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFT 304
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y G EK G++ ++N I+ V +N ++ R + M+
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364
Query: 301 QRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
G PD +TY +++ Y G +K F DL
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL 398
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A LF MV+ G + +FT L+ Y + G DKA +L E M T + +
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLK 534
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI KA + + L DM + I P+ ++Y T+++ + + + E
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE---KFQSAGIQPSINTFNILLDS 177
+ML + P++ T N ++ + SG M K YE K S GI P ++N L+D
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGD---MPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y K + EK ++ M+K + I+TYN++++ F G +++ E + R M I P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFID 265
T SL+ GH + + + RF D
Sbjct: 712 GATYSSLIN--GHVSQ-DNMKEAFRFHD 736
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 153/330 (46%), Gaps = 4/330 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A E+F M G + SF++L+ R+G +A M+ + PD Y+IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS-GIVPDNVIYTIL 438
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + A + +M +G + VTYNT ++ + KMFA+ ++ +M+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD +T +R + G +D +E ++P T+N L+D + KAG +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M + ++Y V++ F +G L + L M + I+P+ VT +L++ Y
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G K L + ++ I+ D+ +N L+D Y + + ++ M++RG + + +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
TY ++ + G +E + ++ KM E
Sbjct: 679 TYNLILNGFCAEG---KMQEAEQVLRKMIE 705
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 13/348 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ + E FQ + +G + + LL R+G D A+ + + + +V
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG-GIELNV 257
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T +I++ + K F+ V LSDM +G+ + VTYNTLI+AY R + E L
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS 317
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
S EP + T N L G+ D + + G+ P+ T+N LL + +
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + + M + +V+++ +I R G L Q FR M I P V
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437
Query: 244 LVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ + G L L+ D +D V +N ++ + K FA+ + M
Sbjct: 438 LIDGFCRNG---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+RG PD T+ T++R Y +G + A +L E M T L +PD
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKA---LNLFEAMVRTNL---KPD 536
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 150/336 (44%), Gaps = 2/336 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E M +G A+ ++ L++AY R GL ++AF LL ++ +P
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF-SSRGMEP 325
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ ++ K +D+ + +L +M G+ PN TYNTL+ R E +
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M PD+ + + + +G + + + + +GI P + IL+D + +
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M +VTYN ++ + + LF M + P T
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+R Y G +K ++ + +++ D V +N L+D + + K + + M +
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD-LVEK 336
+ PD ++Y T++ + ++G+ A D ++EK
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 143/346 (41%), Gaps = 38/346 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L + G + ++ A+L + G +D+A +L M P+ TY+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAATYNT 367
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR------AKM-FAEMELTL 121
L+ + + Q + +MS +G+ P+ V++++LI R A M F EME +
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 122 V----------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ +ML+ C DV T N L +
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + G+ P TF L+ Y K G+ +K + E M + + VTYN +ID F
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-KPEKLGSVLRFIDNSDIMLD 272
+AG++ + + L+ M + I P ++ +++ + +G PE L + ++ I +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPN 606
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V N L+ Y R + L M G PD +Y T++ Y
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
PE A L M+++G N + L+ Y RSG KA+ L M + PD +Y+
Sbjct: 589 PE-ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSFSYN 646
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI LK +K L+++M +G++ N +TYN +++ + E E L KM+
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + + + + + +++ G+ P
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT----LCSLVRAYGHAG 252
+++ + Y++++ + +A L++ F+++R + + S L LVR
Sbjct: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
E G V+R I L+ N +V+A + + F + L M+ +G D VTY
Sbjct: 241 AWEIYGEVVR----GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296
Query: 313 TMVRAYSTNGMKNHA 327
T++ AY G+ A
Sbjct: 297 TLINAYCREGLVEEA 311
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 147/340 (43%), Gaps = 42/340 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF+ M ++G +A+ +T+++S RSG +A L + M + P +TY
Sbjct: 316 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD-KGLIPSAHTYGA 374
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + Q L+++M +GI N V +NTLID Y + M E V M +
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E DV+ N + D + G+ P+ +F L+D Y K G+F +
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 494
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M++ I+TYN++ID + + G++K+ L + + + P T SL+
Sbjct: 495 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 554
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK VD LK F EM QRG P+
Sbjct: 555 CIDGK--------------------------VDM--ALKLFDEMP-------QRGLVPNV 579
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
VTY M+ S +G ++E L ++M ET L PD
Sbjct: 580 VTYTAMISGLSKDG---RSEEAFKLYDEMKETGLT---PD 613
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 1/334 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + Q + F+ MV+ + S T +L + G + L++ + +
Sbjct: 204 LRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVA-AKGVKA 262
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY+ I+ K V +L+ M +G+ N VTY LI + E +
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + E DV+ + SG + +++ G+ PS +T+ L+ KA
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E ++ MQ V +N +ID + +G + + L +M + ++
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+ + ++ +L + + +T+ F L+D Y + F E K V M++
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+G P+ +TY ++ YS G A + +D +E
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 536
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q E A L M +G D N F L+ Y SG+ D+A L M+ +
Sbjct: 378 GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK-KGLE 436
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV Y+ + K D+ + LL M +G+ PNT+++ TLID Y + F E +
Sbjct: 437 SDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRV 496
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + P++ T N + + G + K ++ ++ G+ P + T L+
Sbjct: 497 FREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECI 556
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + M + +VTY +I + G ++ L+ M+ + P
Sbjct: 557 DGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTV 616
Query: 241 LCSLV 245
SLV
Sbjct: 617 YSSLV 621
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 136/335 (40%), Gaps = 9/335 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRS---GLFDKAFSLLEHMKNTP 57
G CK+ E +L + +G AN ++ A + Y + G + +L+E K
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME--KEGV 295
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C +V TY++LI ++ Q L +M +GI + Y ++I R+
Sbjct: 296 AC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +M + P T + +GQ++ + + Q GI + FN L+D
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y ++G ++ + M+K + YN + + + + L M + P+
Sbjct: 414 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 473
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ +L+ Y G + V R ++ + + + +N L+D Y + E + +
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 533
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ RG PD T +++ +G + A + D
Sbjct: 534 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 568
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 35/271 (12%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
++ L Y KMF E M + D + L A GQ+D+ + + +
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+ ++ ++ + I+LD K G E +M+ + +VTYN I+ + + DL
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ + LM E + + VT L+ + + GK E+ + + I D + ++
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 281 DAYGR-------LKCFAEM--KGVL--------------------------EVMQQRGCK 305
R L F EM KG++ MQ +G
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ V + T++ Y +GM + A Q ++EK
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A L +MV+ G NT SFT L+ Y + G F +A + M+ + P
Sbjct: 449 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV-P 507
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
++ TY++LI K + L ++ +G+ P+ T +LI G+ M ++
Sbjct: 508 NIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKL- 566
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M P+V T + G+ + K Y++ + G+ P ++ L+ S
Sbjct: 567 --FDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Query: 179 GKA 181
A
Sbjct: 625 HSA 627
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 1/314 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A + + M++ GC N ++ L++ + + G D+A L M C P
Sbjct: 112 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS-CSP 170
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ILI K LL +M G PN +TYNTL+D+ ++ + +
Sbjct: 171 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 230
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML DC+P +T N + F GQ+D + ++ G P I T+NI++ +A
Sbjct: 231 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 290
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ ++E M + +VTYN ++ +A + + ++ ++R+ VT
Sbjct: 291 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 350
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + +LR ++ + D V + L+ + + + M
Sbjct: 351 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 410
Query: 302 RGCKPDKVTYRTMV 315
+GC P +TY ++
Sbjct: 411 KGCVPTVITYSIVI 424
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 149/330 (45%), Gaps = 2/330 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ ++A++LF+ + C ++ +++ L++ + ++ F +A+ LL+ M+ P
Sbjct: 12 KKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAV 70
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +IK D DM P+ +TY L+DA ++ ++ L L M+
Sbjct: 71 YNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMI 129
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
C P+V T N + F G +D + + P + T+NIL+D Y K +
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 189
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ M KY +TYN ++D+ ++G L ++M KPS T ++
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ G+ + + + + + + D +N ++ R + + +LE M + GC
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
PD VTY ++V + A E +++
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 152/374 (40%), Gaps = 39/374 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + ++A+ L M G + + ++ +G D A M+ C P V
Sbjct: 45 KARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR--HCAPSV 102
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+ + K+ +L DM G PN VTYNTLI+ + + E + +
Sbjct: 103 ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 162
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML C PDV+T N + + + K ++ G +P+ T+N L+DS K+G
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 222
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM-------------- 229
+ + + M + + T+N++ID F + G L LF+LM
Sbjct: 223 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 282
Query: 230 ------RSERI---------------KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
R+ RI P VT S+V A + ++ V + N
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
LD V + L+D + + + + +L M++ G PD V Y ++ + + +
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402
Query: 329 EFQDLVEKMDETCL 342
F E +D+ C+
Sbjct: 403 AF--FSEMLDKGCV 414
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 38/264 (14%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ P+ +L Q MV GC+ N ++ L+ + +SG + AF+L + M DC+
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR-DCK 239
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P T++++I K D L M+ +G P+ TYN +I RA +
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI---------------- 164
L +M C PDV T N + + Q+D + YE ++ G
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359
Query: 165 -------------------QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
P + + IL+ + KA +K A M T++T
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLM 229
Y+IVID ++ ++ L + M
Sbjct: 420 YSIVIDKLCKSARVRDGCMLLKTM 443
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K Q + A+ELFQ M D GC + ++ ++S R+ D A LLE M C
Sbjct: 251 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA-GCP 309
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ ++ KA D+ + + G + VT +TLID +++ + E
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 369
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M PDV + F + Q+D + + G P++ T++I++D K
Sbjct: 370 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429
Query: 181 AGHFEKMSAVMEYM 194
+ +++ M
Sbjct: 430 SARVRDGCMLLKTM 443
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 150/335 (44%), Gaps = 5/335 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K A +L+ MV +G N +++AL+S + G A L M + +PDV
Sbjct: 209 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI-LENIKPDV 267
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T++IL+ K + + + + M QGI+PN VTY +L+D Y K + + L
Sbjct: 268 YTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYT 327
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD+ + N + F ++D +++ I P + T+N L+D K G
Sbjct: 328 MSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGK 387
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ M I+TY+ ++DA + + + L ++ + I+P+ T
Sbjct: 388 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 447
Query: 244 LVRAYGHAGKPEKLGSVLR--FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G+ E ++ + +I ++T + ++ + F E +L M+
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNT--YTVMIHGFCNKGLFDEALALLSKMKD 505
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
C PD VTY ++R+ + A++ ++++ +
Sbjct: 506 NSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 3/247 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++ +F M+ +G N ++ +L+ Y +KA S+L M
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR-GVN 334
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ +Y+ILI K D+ L +M + I P+ VTYN+LID + +
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKL 394
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M PD+ T + L A + Q+D K + GI+P++ T+ IL+D K
Sbjct: 395 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 454
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E + E + Y+ T+ TY ++I F G + L M+ P VT
Sbjct: 455 GGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVT 514
Query: 241 LCSLVRA 247
++R+
Sbjct: 515 YEIIIRS 521
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 1/300 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G NT +FT L+ G +A +++ Q D Y LI K
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM-GFQLDQVGYGTLIHGLCKVGETRA 180
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
LL + ++PN V Y+T+ID + K + +M+S+ P+V T + +
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F GQ+ + K I+P + TFNIL+D + K G ++ V M K
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+VTY ++D + ++ + + + M + P + L+ + K ++ ++
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + I+ D V +N L+D +L + +++ M RG PD +TY +++ A N
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q +KA L + D+G N ++T L+ + G + A ++ E +
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL-VKGYNI 475
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
VNTY+++I FD+ ALLS M P+ VTY +I
Sbjct: 476 TVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 22/223 (9%)
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH------------FEKMSA 189
F N+ + + + P FN +L S K+ H FE ++
Sbjct: 50 TFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP 109
Query: 190 VMEYMQKYH----YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
V+ + Q H Y +T+ +I G + Q + + + V +L+
Sbjct: 110 VLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLI 169
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G+ +LR +D + + + V ++ ++D + K + + M +G
Sbjct: 170 HGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 229
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
P+ VTY ++ + T G + +D ++ ++ L +PD
Sbjct: 230 PNVVTYSALISGFFTVG------QLKDAIDLFNKMILENIKPD 266
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 45/365 (12%)
Query: 7 QPEKAHELFQAMVDE---GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++A EL M D+ G + S+T +++ + + G DKA+S M + PDV
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR-ISPDV 231
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN-------------------------- 97
TYS +I + K A DK +L+ M G+ PN
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 98 ---------TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
VTYN+L+D + E M EPD+ T L+ + G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ M + GI P + FNIL+ +Y K ++ V M+++ + +VTY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA---YGHAGKPEKLGSVLRFID 265
VI ++G + F M E + P+ + SL+ + + K E+L +L +D
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL--ILEMLD 469
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I L+T+FFN ++ ++ + E + + ++M + G KP+ +TY T++ Y G +
Sbjct: 470 RG-ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMD 528
Query: 326 HAKEF 330
A +
Sbjct: 529 EATKL 533
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 1/325 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+QP++A + M +G + + ++ +L+ ++G +A + + M +PD+ T
Sbjct: 280 EQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIAT 338
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y L++ A ++ ALL M GI P+ +N LI AY + + E L KM
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P+V T + SG +D +E+ G+ P+I + L+ S ++
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K ++ M + +N +I + + G + + E LF LM +KP+ +T +L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y AGK ++ +L + + + D V +N L++ Y R+ + + + M G
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
P+ +TY +++ AKE
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKEL 603
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 11/336 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F+ ++ G A+ L+ R A S M P V+TY
Sbjct: 32 EDARHVFEELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 90
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI C +A D A L ++ +G R +T+ L+ K ++ M++ L +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAG 182
C PDV++ L+ + + + + G P + ++ +++ + K G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF--GRAGDLKQMEYLFRLMRSERIKPSCVT 240
+K + M S +VTY+ +I A G+A D K ME L ++++ + P+C+T
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD-KAMEVLTTMVKNG-VMPNCMT 268
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ Y + +P++ L+ + + + D V +N L+D + E + + + M
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+RG +PD TY T+++ Y+T G DL+ +
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 2/333 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++F +M G + + ++ LL Y G + +LL+ M P
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN-GIHP 369
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D + ++ILI + K D+ + S M G+ PN VTY +I ++ + L
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E P++ + + + D E+ + GI + FN ++ S+ K
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M + ++TY+ +ID + AG + + L M S +KP CVT
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ Y + + ++ + + +S + + + +N ++ + A K + + +
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 6/333 (1%)
Query: 1 MLGKCKQPEKAHELFQAM---VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
++G C + + F A+ V +G +FT LL A ++
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 58 DCQPDVNTYSILIKS-CLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
C PDV + +IL+K C + + + ++ L ++D G P+ V+Y T+I+ + +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
+ T +ML PDV T + + A +D + G+ P+ T+N +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
L Y + ++ ++ M+ +VTYN ++D + G + +F M +
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P T C+L++ Y G ++ ++L + + I D FN L+ AY + + E
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V M+Q G P+ VTY ++ +G + A
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 128/317 (40%), Gaps = 42/317 (13%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + A F+ M+DEG N +T+L+ + +DKA L+ M + C
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ SI+ C + + + L M G++PN +TY+TLID Y A E
Sbjct: 475 NTIFFNSIIHSHCKEGRVIES-EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S +PD T N + + ++D +++ S+G+ P+I T+NI+L
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL-- 591
Query: 181 AGHFEKMSAVMEY---MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
H + +A E + K + TYNI++ + + +F+ +
Sbjct: 592 -FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL-------- 642
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
C+T D+ L+T FN ++ A ++ E K +
Sbjct: 643 CLT---------------------------DLQLETRTFNIMIGALLKVGRNDEAKDLFA 675
Query: 298 VMQQRGCKPDKVTYRTM 314
+ G PD TY M
Sbjct: 676 ALSANGLVPDVRTYSLM 692
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 3/270 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G N +++ L+ Y +G D+A LL M + +PD
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV-GMKPD 545
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI + D AL +M + G+ PN +TYN ++ + A + V
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ +Q TFNI++ + K G
Sbjct: 606 GITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 665
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + + + TY+++ + G L++++ LF M + L
Sbjct: 666 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 725
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
S+VR G + G+ L ID L+
Sbjct: 726 SIVRKLLQRGDITRAGTYLSMIDEKHFSLE 755
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 15/334 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK+H ++DE S ++ Y GL D+A LLE + + P ++ +I
Sbjct: 453 EKSH----ILLDE------HSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISA-AI 501
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+ K F+ L G + + + YN +I AYG+A+++ + L M +
Sbjct: 502 IDAYAEKGLWFEAESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRG 561
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD T N ++ F +D + + Q G +P+ TF+ ++ SY + G
Sbjct: 562 TWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAV 621
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + M + Y ++++ F G ++ FRLM I + + L SL++A+
Sbjct: 622 EVYDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAF 681
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G E + + N + DT+ N +++ Y L +E K V E +++RG D
Sbjct: 682 SKVGSLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGY-ADG 740
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
V++ TM+ Y GM + A E + E+M E+ L
Sbjct: 741 VSFATMIYLYKNIGMLDEAIE---VAEEMKESGL 771
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 4/276 (1%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+TY+ LI KA + +M T GI +T+T+NT+I G AE E L+K
Sbjct: 322 STYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLK 381
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD T N L + N+G ID KCY + + G+ P + T LL +
Sbjct: 382 MEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNM 441
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTLC 242
E + V+ M+K H + VI + G L + + L R + + P
Sbjct: 442 VEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRIS--A 499
Query: 243 SLVRAYGHAGKPEKLGSVLRFI-DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ AY G + S+ + D S +D + +N ++ AYG+ + + + + + M+
Sbjct: 500 AIIDAYAEKGLWFEAESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKN 559
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
RG PD+ TY ++++ +S + + A+ +++M
Sbjct: 560 RGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRM 595
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 149/329 (45%), Gaps = 37/329 (11%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+++ + + K+ D P+V Y+I++++ +A +D+++ ++M+ G+ P TY
Sbjct: 141 WERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTYG 200
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
LID YG+ + E L + M PD TMN +R ++G+ D+ +K Y+ +
Sbjct: 201 MLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFDSADKFYKDWCRG 260
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV------------------ 204
++ + N ++ +G E ++ + + T +
Sbjct: 261 LVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTELFRIGTRIPNRKVSPEVDNCVRKPRL 320
Query: 205 --TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
TYN +ID +G+AG LK +F M + I +T +++ G G + ++L
Sbjct: 321 TSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLL 380
Query: 263 FIDNSDIMLDTVFFNCLVDAY-------GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
++ + DT +N + Y G LKC+ ++ V G PD VT+R ++
Sbjct: 381 KMEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREV-------GLFPDVVTHRALL 433
Query: 316 RAYSTNGMKNHAKEFQDLVEKMDETCLAM 344
S +N ++ ++++ +M+++ + +
Sbjct: 434 HVLSE---RNMVEDVENVIAEMEKSHILL 459
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 2/293 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + + ++ AYG++ L++KAF L + MKN PD TY+ LI+ D+
Sbjct: 526 GKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNR-GTWPDECTYNSLIQMFSGGDLVDE 584
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ LL++M G +P T++ +I +Y R + ++ M+ D EP+ +
Sbjct: 585 ARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVN 644
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F GQ + K + + +GI + L+ ++ K G E + M+
Sbjct: 645 GFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGA 704
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ N +I+ + G + + + +F +R ER V+ +++ Y + G ++ V
Sbjct: 705 DTIASNSMINLYADLGMVSEAKQVFEDLR-ERGYADGVSFATMIYLYKNIGMLDEAIEVA 763
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ S ++ D F +++ Y E +L M R PD T+ +
Sbjct: 764 EEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVL 816
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 135/359 (37%), Gaps = 43/359 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L M G Q+F+A++++Y R GL A + + M + D +P+ Y +
Sbjct: 583 DEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHA-DVEPNEILYGV 641
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + ++ M GI N + +LI A+ + + +M + +
Sbjct: 642 LVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNME 701
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
D N + + + G + ++ +E + G + +F ++ Y G ++
Sbjct: 702 DGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADGV-SFATMIYLYKNIGMLDEAI 760
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV--- 245
V E M++ ++ VI+ + G +++ L M + ++ P T L
Sbjct: 761 EVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTIL 820
Query: 246 --------------------RAYG--------------HAGKPEKLGSVLRFIDNSDIML 271
+ Y HA E + L+ +++ L
Sbjct: 821 KKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLK----AEVQL 876
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D+ +N + AYG + + + M+ + KPD VTY +V Y GM K+
Sbjct: 877 DSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 35/310 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E+A + F+ M G N T+L+ A+ + G + A + MKN D + +
Sbjct: 651 QAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGADTIASN 710
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S +I + + + D+ +G + V++ T+I Y M E +M
Sbjct: 711 S-MINLYADLGMVSEAKQVFEDLRERGY-ADGVSFATMIYLYKNIGMLDEAIEVAEEMKE 768
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK------ 180
D + + + +GQ+ + + + + P TFN+L K
Sbjct: 769 SGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTILKKGVIPLE 828
Query: 181 -------AGHFEK-------MSAVM-------------EYMQKYHYSWTIVTYNIVIDAF 213
A H EK ++AV + K YN+ I A+
Sbjct: 829 AVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLKAEVQLDSFAYNVAIYAY 888
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
G A + + +F M+ + +KP VT +LV YG AG E + + + +I L+
Sbjct: 889 GAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNK 948
Query: 274 VFFNCLVDAY 283
F +++ +
Sbjct: 949 SLFFAIINTF 958
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 37/248 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F+ + + G A+ SF ++ Y G+ D+A + E MK + + D ++ +
Sbjct: 724 EAKQVFEDLRERGY-ADGVSFATMIYLYKNIGMLDEAIEVAEEMKESGLLR-DATSFRKV 781
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI-----------------DAYGRAK 112
I+ + LL +M T+ + P+ T+N L A+ K
Sbjct: 782 IECYAINGQVRECGELLHEMVTRKLLPDNRTFNVLFTILKKGVIPLEAVSQLESAFHEEK 841
Query: 113 MFAEMELTLV----------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+A + L + + D + N + A+G + +ID +
Sbjct: 842 TYARQAIIAAVFSGLGLHASALESCDTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIF 901
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
K + ++P + T+ L+ YGKAG E + + ++ + +I+ F A
Sbjct: 902 MKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSA 961
Query: 217 G--DLKQM 222
DL QM
Sbjct: 962 HRYDLVQM 969
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A E+ + M + G + SF ++ Y +G + LL M T PD T+++
Sbjct: 757 DEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMV-TRKLLPDNRTFNV 815
Query: 69 L-------------IKSCLKAFAFDK-------VQALLSDMSTQG-------------IR 95
L + AF +K + A+ S + ++
Sbjct: 816 LFTILKKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALESCDTFLKAEVQ 875
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
++ YN I AYG A+ + +KM ++ +PD+ T + +G +G I+ +++
Sbjct: 876 LDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIEGVKQI 935
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
Y + + I+ + + F +++++ A ++ + V + M+
Sbjct: 936 YSQLKYGEIELNKSLFFAIINTFRSAHRYDLVQMVKQEMK 975
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 150/318 (47%), Gaps = 1/318 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M GC N ++ L+ AY + G D+AF LL+ M ++ QP++ +Y+++I
Sbjct: 33 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM-SSKGMQPNLISYNVIINGLC 91
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ + + +L +M +G P+ VTYNTL++ Y + F + + +M+ P V
Sbjct: 92 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 151
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + + ++ + +++ + G++P+ T+ L+D + + G + ++ M
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ +S ++VTYN I +++ + + M + + P V+ +++ + G+
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 271
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ + + + + D V ++ L+ ++ E + + M G PD+ TY T+
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331
Query: 315 VRAYSTNGMKNHAKEFQD 332
+ AY G N A D
Sbjct: 332 INAYCVEGDLNKALHLHD 349
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI+ K +M G PN VTYNTLIDAY + E
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S+ +P++ + N + G + + E+ G P T+N LL+ Y K
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+F + + M + S ++VTY +I++ +A +L + F MR ++P+ T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + G + +L + S V +N + + L+ E GV++ M
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
++G PD V+Y T++ + G + A + Q++VEK
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 97/204 (47%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ P+V+T N +R F + G++ C+ + + G P++ T+N L+D+Y K G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ +++ M +++YN++I+ R G +K+ + M + P VT +
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G + + + + + V + L+++ + + + M+ RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA 327
+P++ TY T++ +S G+ N A
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEA 204
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 132/320 (41%), Gaps = 23/320 (7%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + +A E F M G N +++T L+ + R GL ++A+ +L M + P V
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSV 220
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ I ++ ++ +M +G+ P+ V+Y+T+I + R +
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + PD T + ++ ++ ++ G+ P T+ L+++Y G
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLC 242
K + + M + VTY+++I+ + ++ + LF+L+ E + PS VT
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYD 399
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ + S+I +V L+ + E V E M +R
Sbjct: 400 TLIE------------------NCSNIEFKSVV--ALIKGFCMKGLMHEADRVFESMVER 439
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
KP + Y ++ + G
Sbjct: 440 NHKPGEAVYNVIIHGHCRGG 459
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%)
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
+ P++ T+NIL+ + G +K M++ +VTYN +IDA+ + G + +
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
L + M S+ ++P+ ++ ++ G ++ +L + D V +N L++ Y
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ F + + M + G P VTY ++ + N A EF D
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
++RS R+ P+ T L+R + G+ +K ++ + + + V +N L+DAY ++
Sbjct: 1 MIRS-RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
E G+L+ M +G +P+ ++Y ++ G KE +++E+M
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG---SMKEAWEILEEM 106
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 149/308 (48%), Gaps = 5/308 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQ 60
G+ ++ A +F+ M G + + ++ +L + F +A L + + K P +
Sbjct: 184 GRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLK 243
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD + ++I KA ++K + + ++M+ +G+ TVTYN+L+ + E+
Sbjct: 244 PDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETN---YKEVSKI 300
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M +PDV + + A+G + + + +E+ AGI+P+ +NILLD++
Sbjct: 301 YDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAI 360
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ V + M++ S I +Y ++ A+ A D++ E FR ++ + +P+ VT
Sbjct: 361 SGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVT 420
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L++ Y EK+ + + I ++ ++DAYG+ K F ++
Sbjct: 421 YGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIE 480
Query: 301 QRGCKPDK 308
G +PD+
Sbjct: 481 SCGLRPDQ 488
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 160/349 (45%), Gaps = 13/349 (3%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK +A ++ M +G N S TAL+ AYGR ++ A ++ M+ + +P
Sbjct: 149 GKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ-SGGPEPS 207
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG---IRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY I++K+ ++ F + + L + + ++P+ ++ +I + +A + +
Sbjct: 208 ALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARK 267
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M + T N + N ++ K Y++ Q AG+QP + ++ +L+ +YG
Sbjct: 268 VFAEMAARGVPQTTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLISAYG 324
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T YNI++DAF +G ++Q + +F+ M+ +R P
Sbjct: 325 KARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDIC 384
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +++ AY +A E + R + + V + L+ Y ++ +M E M
Sbjct: 385 SYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEM 444
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G + ++ T++ AY N K+F V +E RPD
Sbjct: 445 KVNGIRVNQTILTTIMDAYGKN------KDFGSAVIWFNEIESCGLRPD 487
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ +LI + K F++ + +L+ M+ +G PN V++ L++AYGR + + E +M
Sbjct: 141 FVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ 200
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAG 182
S EP T L+ F + E+ ++ + ++P F++++ + KAG
Sbjct: 201 SGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAG 260
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++EK V M T VTYN ++ + K++ ++ M+ ++P V+
Sbjct: 261 NYEKARKVFAEMAARGVPQTTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 317
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AYG A + E+ +V + ++ I +N L+DA+ + K V + M++
Sbjct: 318 LLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRD 377
Query: 303 GCKPDKVTYRTMVRAY 318
C PD +Y TM+ AY
Sbjct: 378 RCSPDICSYTTMLSAY 393
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ E+A +F+ M+D G +++ LL A+ SG+ ++A + + MK C PD
Sbjct: 324 GKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRD-RCSPD 382
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ ++ + + A + + + G RPN VTY TLI Y + +M
Sbjct: 383 ICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYE 442
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + + + A+G + + + + +S G++P NILL A
Sbjct: 443 EMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLSLAKTAE 502
Query: 183 HFEKMSAVMEY 193
++ + ++ Y
Sbjct: 503 ELDEANQLVGY 513
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 171 FNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
F +L+ +YGK G F + V+ M K Y+ +V++ +++A+GR E +FR M+
Sbjct: 141 FVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ 200
Query: 231 SERIKPSCVTLCSLVRAYGHAGK---PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
S +PS +T +++ + K E+L L + + D F+ ++ + +
Sbjct: 201 SGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAG 260
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
+ + + V M RG VTY +++ ++ TN KE + ++M L +P
Sbjct: 261 NYEKARKVFAEMAARGVPQTTVTYNSLM-SFETN-----YKEVSKIYDQMQRAGL---QP 311
Query: 348 D 348
D
Sbjct: 312 D 312
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/147 (16%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 187 MSAVMEYMQ-KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+S ++E+++ + ++++ + + ++I A+G+ GD + E + LM + P+ V+ +L+
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALM 180
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM---QQR 302
AYG + ++ R + + + + ++ + F E + + + + ++
Sbjct: 181 EAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKP 240
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE 329
KPD+ + ++ + G A++
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARK 267
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 147/340 (43%), Gaps = 42/340 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF+ M ++G +A+ +T+++S RSG +A L + M + P +TY
Sbjct: 312 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD-KGLIPSAHTYGA 370
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + Q L+++M +GI N V +NTLID Y + M E V M +
Sbjct: 371 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 430
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E DV+ N + D + G+ P+ +F L+D Y K G+F +
Sbjct: 431 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 490
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M++ I+TYN++ID + + G++K+ L + + + P T SL+
Sbjct: 491 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 550
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK VD LK F E M QRG P+
Sbjct: 551 CIDGK--------------------------VDM--ALKLFDE-------MPQRGLVPNV 575
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
VTY M+ S +G ++E L ++M ET L PD
Sbjct: 576 VTYTAMISGLSKDG---RSEEAFKLYDEMKETGLT---PD 609
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 1/334 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + Q + F+ MV+ + S T +L + G + L++ + +
Sbjct: 200 LRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVA-AKGVKA 258
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TY+ I+ K V +L+ M +G+ N VTY LI + E +
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + E DV+ + SG + +++ G+ PS +T+ L+ KA
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E ++ MQ V +N +ID + +G + + L +M + ++
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
S+ + ++ +L + + +T+ F L+D Y + F E K V M++
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+G P+ +TY ++ YS G A + +D +E
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 532
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q E A L M +G D N F L+ Y SG+ D+A L M+ +
Sbjct: 374 GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK-KGLE 432
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV Y+ + K D+ + LL M +G+ PNT+++ TLID Y + F E +
Sbjct: 433 SDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRV 492
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M + P++ T N + + G + K ++ ++ G+ P + T L+
Sbjct: 493 FREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECI 552
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + M + +VTY +I + G ++ L+ M+ + P
Sbjct: 553 DGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTV 612
Query: 241 LCSLV 245
SLV
Sbjct: 613 YSSLV 617
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 136/335 (40%), Gaps = 9/335 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRS---GLFDKAFSLLEHMKNTP 57
G CK+ E +L + +G AN ++ A + Y + G + +L+E K
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME--KEGV 291
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
C +V TY++LI ++ Q L +M +GI + Y ++I R+
Sbjct: 292 AC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +M + P T + +GQ++ + + Q GI + FN L+D
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y ++G ++ + M+K + YN + + + + L M + P+
Sbjct: 410 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 469
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
++ +L+ Y G + V R ++ + + + +N L+D Y + E + +
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 529
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
++ RG PD T +++ +G + A + D
Sbjct: 530 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 564
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 35/271 (12%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
++ L Y KMF E M + D + L A GQ+D+ + + +
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+ ++ ++ + I+LD K G E +M+ + +VTYN I+ + + DL
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ + LM E + + VT L+ + + GK E+ + + I D + ++
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 281 DAYGR-------LKCFAEM--KGVL--------------------------EVMQQRGCK 305
R L F EM KG++ MQ +G
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ V + T++ Y +GM + A Q ++EK
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A L +MV+ G NT SFT L+ Y + G F +A + M+ +
Sbjct: 444 GLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV- 502
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEM 117
P++ TY++LI K + L ++ +G+ P+ T +LI G+ M ++
Sbjct: 503 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKL 562
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M P+V T + G+ + K Y++ + G+ P ++ L+ S
Sbjct: 563 ---FDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 619
Query: 178 YGKA 181
A
Sbjct: 620 LHSA 623
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 149/330 (45%), Gaps = 9/330 (2%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L++ M T +F L+SA G + A + + M + C+P+ + IL++
Sbjct: 140 LYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKM-SEKGCKPNEFSLGILVRGY 198
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+A LL +M + G PN V YNT+I + E E + KM PD+
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQ---SAGI-QPSINTFNILLDSYGKAGHFEKMSA 189
T NC + A SGQI + + Q G+ +P+ T+N++L+ + G FE+ A
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M K + ++ +YNI + R+G L + + M + IKP+ + LV
Sbjct: 319 IFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G S+L + S + DTV ++ L+ Y R E VL M Q GC P+
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T ++ + G A E +DL++ M+E
Sbjct: 438 TCNILLHSLWKEG---RASEAEDLLQMMNE 464
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 149/355 (41%), Gaps = 40/355 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT-PDCQPDVNT 65
P+ H L Q ++ + D S +L+ GL + A S +++ P P ++
Sbjct: 62 HPQIDH-LHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L + LK D V L DM+ ++P T T+N LI A KM
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ C+P+ +++ +R + +G ++ +S+G P+ +N ++ S G
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER----IKPSCVTL 241
+ ++E M++ S IVT+N I A ++G + + +FR M+ + KP+ VT
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDI---------MLDTV------------------ 274
++ + G E+ ++ + NS+ ML V
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360
Query: 275 -------FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N LV + F++ + +L +M++ G PD VTY T++ Y G
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 37/343 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F +M + + +S+ + RSG +A +L M + +P++ +Y+I
Sbjct: 314 EEARAIFDSMKNSET-LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK-NIKPNLYSYNI 371
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K F +++L M G+ P+TVTY+TL+ Y R E L +M+
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+++T N L + G+ E + G T N +++ KAG+ +K
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491
Query: 189 AVMEYMQKYHYSWT-----------------------------IVTYNIVIDAFGRAGDL 219
++ M WT +TY +I + G +
Sbjct: 492 EIVSGM------WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + M +++ P + + + Y GK VL+ ++ +N L
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ G E+ G+++ M++RG P+ TY ++ S G
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGG 648
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-------- 53
L K + +A +L Q M + G + + +++ ++G DKA ++ M
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASL 505
Query: 54 --------------KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
N C PD TY+ +I K D+ + L +M + + P+++
Sbjct: 506 GNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSL 565
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
++T I Y + + L +M + C + T N ++ G+ QI + ++
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ GI P++ T+N ++ + G + + +++ M + S I T+ I+I AF +A D
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685
Query: 220 KQMEYLFRLMRS 231
+ LF + S
Sbjct: 686 GAAQELFEIALS 697
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P + N R ++D + Y+ A ++P TFN+L+ + + G+ E V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV---TLCSLVRA 247
+ M + + I++ + RAG L MRS P+ V T+ S +
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ---QRGC 304
G + EKL +R + S D V FNC + A + E + MQ + G
Sbjct: 236 EGQTVEAEKLVEKMREVGLSP---DIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292
Query: 305 -KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
KP+ VTY M+ + + GM A+ D
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFD 321
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
H I YN++ + + + +L++ M R+KP T L+ A G E
Sbjct: 113 HDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENA 172
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
V + + LV Y R + +L+ M+ G P++V Y T++ +
Sbjct: 173 REVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232
Query: 318 YSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
G E + LVEKM E L+ PD
Sbjct: 233 LCGEG---QTVEAEKLVEKMREVGLS---PDI 258
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 4/285 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+LG C+ A ++F M EG C N+ S++ L+ G ++AF L + M
Sbjct: 237 LLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM-GEK 295
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
CQP TY++LIK+ DK L +M +G +PN TY LID R E
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KM+ + P V T N + + G++ + + +P++ TFN L++
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G K +++ M S IV+YN++ID R G + L M S ++P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
C+T +++ A+ GK + + L + I LD V L+D
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 4/337 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E+A+ + + MV +G + ++ AL++ Y + G AF LL M+ C+
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CK 403
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ L++ + K LL M G+ P+ V+YN LID R
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S D EPD T + AF G+ D GI T L+D
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCN 523
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++E + K T + N+++D + LK+ + + + PS VT
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVT 583
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV +G +L + S + + + +++ + E + +L MQ
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G P+ VTY MV+ Y NG + A E + +VE+
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 138/329 (41%), Gaps = 1/329 (0%)
Query: 10 KAHELFQA-MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A E+F ++ G ++ T+LL + R A + + M C P+ +YSI
Sbjct: 212 EAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSI 271
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ L M +G +P+T TY LI A + + +M++
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+P+V T + G+I+ K GI PS+ T+N L++ Y K G
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+K + T+N +++ R G + +L + M + P V+ L+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G +L +++ D+ D + F +++A+ + L +M ++G D+
Sbjct: 452 CREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
VT T++ G A + + KM
Sbjct: 512 VTGTTLIDGVCNVGKTRDALFILETLVKM 540
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 139/340 (40%), Gaps = 23/340 (6%)
Query: 5 CKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLE-----HMKNTP 57
CKQ + A M+ +G + + T L+ G A +LE M TP
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTP 546
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
++ ++++ K + A+L ++ G+ P+ VTY TL+D R+ +
Sbjct: 547 ------HSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGS 600
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M C P+V+ + G+++ EK Q +G+ P+ T+ +++
Sbjct: 601 FRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG------RAGDLKQMEYLFRLMRS 231
Y G ++ + M + Y Y+ ++ F R D + ++ L ++
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVV-- 718
Query: 232 ERIKPSCVTLCS-LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
E++ S LC LV G+ ++ +++ I S + L+ + ++++Y K
Sbjct: 719 EQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKA-IDIIMESYCSKKKHT 777
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ ++ ++ + G P ++ +++ G A+E
Sbjct: 778 KCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERAREL 817
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 150/318 (47%), Gaps = 1/318 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
F M GC N ++ L+ AY + G D+AF LL+ M ++ QP++ +Y+++I
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM-SSKGMQPNLISYNVIINGLC 295
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
+ + + +L +M +G P+ VTYNTL++ Y + F + + +M+ P V
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + + ++ + +++ + G++P+ T+ L+D + + G + ++ M
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+ +S ++VTYN I +++ + + M + + P V+ +++ + G+
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ + + + + D V ++ L+ ++ E + + M G PD+ TY T+
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535
Query: 315 VRAYSTNGMKNHAKEFQD 332
+ AY G N A D
Sbjct: 536 INAYCVEGDLNKALHLHD 553
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI+ K +M G PN VTYNTLIDAY + E
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S+ +P++ + N + G + + E+ G P T+N LL+ Y K
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+F + + M + S ++VTY +I++ +A +L + F MR ++P+ T
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + G + +L + S V +N + + L+ E GV++ M
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
++G PD V+Y T++ + G + A + Q++VEK
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 126/265 (47%), Gaps = 2/265 (0%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV-- 122
+ +++KS D+ ++ + G P ++YN+++DA R++ ++ V
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P+V+T N +R F + G++ C+ + + G P++ T+N L+D+Y K G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ +++ M +++YN++I+ R G +K+ + M + P VT
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y G + + + + + V + L+++ + + + M+ R
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G +P++ TY T++ +S G+ N A
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEA 408
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 132/320 (41%), Gaps = 23/320 (7%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + +A E F M G N +++T L+ + R GL ++A+ +L M + P V
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSV 424
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ I ++ ++ +M +G+ P+ V+Y+T+I + R +
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ + PD T + ++ ++ ++ G+ P T+ L+++Y G
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME-YLFRLMRSERIKPSCVTLC 242
K + + M + VTY+++I+ + ++ + LF+L+ E + PS VT
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYD 603
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ + S+I +V L+ + E V E M +R
Sbjct: 604 TLIE------------------NCSNIEFKSVV--ALIKGFCMKGLMHEADRVFESMVER 643
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
KP + Y ++ + G
Sbjct: 644 NHKPGEAVYNVIIHGHCRGG 663
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS-GQID-TMEK 154
++ ++ ++ +Y M + T+ S P V + N L A S G + + E+
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Y + + + P++ T+NIL+ + G +K M++ +VTYN +IDA+
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G + + L + M S+ ++P+ ++ ++ G ++ +L + D V
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+N L++ Y + F + + M + G P VTY ++ + N A EF D
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M+ N +F ++ R+G +KA +E MK P+V TY+ L+
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK-AWGISPNVVTYNTLVDGY 245
Query: 74 LK---AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K A K +A + +M I PN VT+NTLID + + + A + +M + +
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + N+G+++ ++K G++P+I T+N L++ + K ++ + V
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + K ++T+N +IDA+ + G +++ L M E I P+ T L+
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ +L ++N + D V +N L+D + + +L M G KP+ VT
Sbjct: 426 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVT 485
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y T++ Y G A + +EK
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRMEK 511
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 6/314 (1%)
Query: 3 GKCKQPE-----KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
G CK+ KA + M+ N +F L+ + + A E M+
Sbjct: 244 GYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ- 302
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+P++ TY+ LI ++ L M G++PN VTYN LI+ + + KM E
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEA 362
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ ++ P+V T N + A+ G ++ GI P+++T+N L+
Sbjct: 363 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 422
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ + ++ M+ +VTYNI+ID + + E L M + +KP+
Sbjct: 423 LCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +L+ Y GK + +V ++ + V +N L+ Y ++ G+L
Sbjct: 483 HVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLN 542
Query: 298 VMQQRGCKPDKVTY 311
M ++G P++ TY
Sbjct: 543 EMLEKGLNPNRTTY 556
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 38/300 (12%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN-------------------------- 102
L+ + +K V+ + +M + I N T+N
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 103 ---------TLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
TL+D Y G A + E + +ML+ P+ T N + F +
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
+K +E+ Q G++P+I T+N L++ G E+ + + M IVTYN +I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ F + +K+ +F + + + P+ +T +++ AY G E+ S+ + + I+
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ +NCL+ R + K +L M+ +G K D VTY ++ N +A++
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A ++F + + N +F ++ AY + G+ ++ FSL M +
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE-GIL 410
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V+TY+ LI + + LL++M +G++ + VTYN LID + E
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M + +P+ T N + + G++ + + QP++ T+N+L+ Y K
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
E + ++ M + + TY+IV
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L A +I +E Y++ I ++NTFNI ++ +AG K +E M+
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228
Query: 197 YHYSWTIVTYNIVIDAF---GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ S +VTYN ++D + G AG + + E + M + +I P+ VT
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVT------------- 275
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
FN L+D + + + A K E MQ++G KP+ VTY +
Sbjct: 276 ----------------------FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 314 MVRAYSTNGMKNHAKEFQDLVEKM 337
++ NG +E DL +KM
Sbjct: 314 LINGLCNNG---KLEEAIDLWDKM 334
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 154/305 (50%), Gaps = 9/305 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A S+ +H+ + +P + TY+IL+ + F+ + +LL+++ G+RP+++ +N L
Sbjct: 85 QAHSVFKHLMDEGH-KPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNAL 143
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG- 163
I+A+ AK E T KM C P T N ++ +G G+ + ++ ++ G
Sbjct: 144 INAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGS 203
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
++P++ T+NIL+ ++ + E+ V+ MQ + IVTYN + A+ + + E
Sbjct: 204 VRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAE 263
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
L +++ R++ S T ++ Y G+ E+ ++ + ++ + + V FN L+ +
Sbjct: 264 ELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGF 322
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
A + +L +M++ G KPD VTY + +S+ G H + + +KM E +
Sbjct: 323 LDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLG---HMAKCMHVFDKMIEAGI- 378
Query: 344 MKRPD 348
PD
Sbjct: 379 --EPD 381
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 152/346 (43%), Gaps = 4/346 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ +A F M GC T +F L+ YG G +++ + + M +P++
Sbjct: 149 EAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNL 208
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+K+ ++ ++ M G P+ VTYNT+ AY E +V+
Sbjct: 209 TTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVE 268
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + T + + G+++ +C ++ + AG P++ FN LL + A
Sbjct: 269 IQTR-VRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAND 327
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M+K+ IVTY+ ++ F G + + ++F M I+P
Sbjct: 328 MAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSI 387
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + + A +PEK +L + + + + V F ++ + + V + M + G
Sbjct: 388 LAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSG 447
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P+ T+ T + YS A+E +++ M ET + K+ +
Sbjct: 448 VYPNLRTFETPIWGYSEQKQPWKAEE---VLQMMRETGVKPKQSTY 490
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+RA +S + ++ G +PS+ T+ ILL + FE + +++ ++
Sbjct: 74 MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +N +I+AF A + + F M+ P+ T +L++ YG GKPE+
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193
Query: 260 VLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V + + + +N LV A+ + E GV+ MQ G +PD VTY T+ AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253
Query: 319 STNGMKNHAKEF 330
+ N A+E
Sbjct: 254 ANNDETWRAEEL 265
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ ++ Y R G ++A ++ MK+ P+V ++ L+K L A V +L
Sbjct: 278 RTWGIIIGGYCREGRLEEALRCVQQMKDAGSV-PNVVIFNTLLKGFLDANDMAAVNKILG 336
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI+P+ VTY+ ++ + A+ KM+ EPD + + F +
Sbjct: 337 LMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQ 396
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q + E + G+ P++ TF ++ + E V + M K + T+
Sbjct: 397 QPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFE 456
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
I + + E + ++MR +KP T C + A+ G E +
Sbjct: 457 TPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENI 506
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 112/275 (40%), Gaps = 2/275 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G + + ++ + SAY + +A L+ ++ + T+ I
Sbjct: 225 EEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR--VRTSERTWGI 282
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + ++ + M G PN V +NTL+ + A A + L M
Sbjct: 283 IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFG 342
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L F + G + ++K AGI+P ++IL + +A EK
Sbjct: 343 IKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAE 402
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M +VT+ VI + D++ ++ M + P+ T + + Y
Sbjct: 403 DLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETPIWGY 462
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + + + + + DA+
Sbjct: 463 SEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAW 497
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 150/310 (48%), Gaps = 2/310 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E FQ M +G + +L+ + GL +A + M+ + + Y+ ++
Sbjct: 338 AWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQSEMERR-GIPSNTSIYNEIV 396
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K ++ + L +M +G++P VTYN L+DAY R +E L++M +
Sbjct: 397 NAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLGLQ 456
Query: 131 PDVWTMNCTLRAFGNSGQI-DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + NC + A+G ++ + E + + ++ GI+P+ +++ LL +Y G +EK
Sbjct: 457 PNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSYTSLLCAYAVNGQYEKAHI 516
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
M+K ++ TY ++D F RAGD ++ +R M +E++ + VT ++
Sbjct: 517 TYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMINEKVGGTRVTFHMVLDGLA 576
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G + V+ N + T+ +N L++ Y + ++ +L+ M KPD V
Sbjct: 577 KYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLKEMSALELKPDSV 636
Query: 310 TYRTMVRAYS 319
TY TM+ AY+
Sbjct: 637 TYSTMIYAYA 646
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G +NT + +++AY + ++A L MK +P + TY+IL+ + +
Sbjct: 380 MERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEK-GLKPTIVTYNILMDAYSRRL 438
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTM 136
+ V++LL +M G++PN +YN LI AYGR K +E E ++M ++ +P +
Sbjct: 439 QPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSY 498
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
L A+ +GQ + Y + ++PS+ T+ LLD + +AG +K+ M
Sbjct: 499 TSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMIN 558
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
T VT+++V+D + G Q + + + P+ +T L+ Y G+ K
Sbjct: 559 EKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYK 618
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
L +L+ + ++ D+V ++ ++ AY R++ F++ + M + G PD +Y+ ++
Sbjct: 619 LPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRSGQVPDAKSYKKLLN 678
Query: 317 AYSTNGMKNHAKEFQDLV 334
+ + K+ +V
Sbjct: 679 TLDVKSARKNIKDKSAIV 696
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 151/359 (42%), Gaps = 38/359 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ + ++ E+ + E + A +S G +D A+++ E M+ Q
Sbjct: 257 VLGRARMADEVLEILGRLPHERQFREAVLYNAAMSGVAYCGRYDDAWTIFEFMEKN-SVQ 315
Query: 61 PDVNTYSILIK--------------------------------SCLKAFAFD--KVQALL 86
PD T SI++ S +K F + K +AL+
Sbjct: 316 PDHITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALI 375
Query: 87 --SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
S+M +GI NT YN +++AY + E E V+M + +P + T N + A+
Sbjct: 376 IQSEMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYS 435
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTI 203
Q + +E + G+QP+ ++N L+ +YG+ EK M+ T
Sbjct: 436 RRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTS 495
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+Y ++ A+ G ++ + M+ ER+KPS T +L+ + AG +KL R
Sbjct: 496 SSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRS 555
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N + V F+ ++D + + + + V+ G P +TY ++ Y+ G
Sbjct: 556 MINEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGG 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG-LFDKAFSLLEHMKNTPDCQPDVNT 65
QPE L M D G N +S+ L+SAYGR + +KA MK +P ++
Sbjct: 439 QPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMK-ADGIKPTSSS 497
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ L+ + ++K DM + ++P+ TY L+D + RA ++ T M+
Sbjct: 498 YTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMI 557
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+E T + L G +F + G+ P+ T+NIL+++Y K G
Sbjct: 558 NEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHY 617
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
K+ +++ M VTY+ +I A+ R D + Y + M
Sbjct: 618 KLPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQM 661
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K E +++M++E +F +L + GL+ +A ++ N P TY+I
Sbjct: 547 DKLMETWRSMINEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNI-GLPPTTMTYNI 605
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + K K+ LL +MS ++P++VTY+T+I AY R + F++ +M+
Sbjct: 606 LMNTYAKGGQHYKLPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRSG 665
Query: 129 CEPDV 133
PD
Sbjct: 666 QVPDA 670
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 20/257 (7%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P + + GRA+M E+ L ++ E + N + G+ D
Sbjct: 245 QPTPQAWLVALVVLGRARMADEVLEILGRLPHERQFREAVLYNAAMSGVAYCGRYDDAWT 304
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA--VMEYMQKYH---YSWTIVTYNIV 209
+E + +QP T +I+L+ K +K+SA E+ Q+ + W++ +
Sbjct: 305 IFEFMEKNSVQPDHITSSIMLNVMKK----QKVSAKAAWEFFQRMNRKGVKWSLDVSASL 360
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS-LVRAYGHAGKPEKLGSVLRFIDNSD 268
I F G LK+ + + R PS ++ + +V AY + E+ + +
Sbjct: 361 IKMFCDEG-LKKEALIIQSEMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKG 419
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ V +N L+DAY R ++ +L M G +P+ +Y ++ AY
Sbjct: 420 LKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQ------- 472
Query: 329 EFQDLVEKMDETCLAMK 345
+ + EK ++ L MK
Sbjct: 473 --KKMSEKAEDAFLRMK 487
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ P+ TY
Sbjct: 56 KPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 111
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I K D+ + +M T+G ++P V YN LI Y L +M+
Sbjct: 112 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 171
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
V T N + A G+ + E+ G+ P + T+NIL++ + K G+ +
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 231
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + E M + T+VTY +I A + G +++ + LF I+P V +L+
Sbjct: 232 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
++ +G ++ ++ ++ I D V +N L+ L E + +++ M +RG +
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351
Query: 306 PDKVTYRTMVRAYSTNG 322
PD VTY T++ YS G
Sbjct: 352 PDLVTYNTLISGYSMKG 368
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 147/344 (42%), Gaps = 13/344 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A ++ + M + G A Q ++ ++S + + G D+A + + M + +P+ Y+
Sbjct: 89 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 148
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKM 124
LI D M +G+ TYN L+ A GR E+ + +M
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEM 205
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV+T N + G + + +E G++ ++ T+ L+ + K G
Sbjct: 206 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 265
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + + +V YN +I++ +G++ + + M +RI P VT +L
Sbjct: 266 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+R G+ ++ ++ + I D V +N L+ Y + + M +G
Sbjct: 326 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
P +TY +++ NG + A +++V++M E + PD
Sbjct: 386 NPTLLTYNALIQGLCKNGQGDDA---ENMVKEMVENGIT---PD 423
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 1/265 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
MV+ G ++ L+ A G +A+ L+E M PDV TY+ILI K
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFTYNILINGHCKEG 228
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
K + +MS +G+R VTY +LI A + E + + + PD+ N
Sbjct: 229 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 288
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ + SG ID + + + I P T+N L+ G ++ +++ M K
Sbjct: 289 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+VTYN +I + GD+K + M ++ P+ +T +L++ G+ +
Sbjct: 349 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 408
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDA 282
++++ + + I D + L++
Sbjct: 409 ENMVKEMVENGITPDDSTYISLIEG 433
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q ++ +LF V G + + AL++++ SG D+AF ++ M+ P
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAP 317
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ L++ D+ + L+ +M+ +GI+P+ VTYNTLI Y +
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+M+++ P + T N ++ +GQ D E ++ GI P +T+ L++
Sbjct: 378 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 12/332 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA +F M ++G N ++ ++ Y G + A LL M + PDV T+S L
Sbjct: 98 KAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER-NIDPDVVTFSAL 156
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + +K + L +M + I P T+TY+++ID + + + + M+S+ C
Sbjct: 157 INAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGC 216
Query: 130 EPDVWTMNCTL-----------RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
PD+ T+N + F G ++ + +++ S G+ P I T N LL
Sbjct: 217 SPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G EK + + QK T NI+I+ + + + LF + ++
Sbjct: 277 CENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDV 336
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ + G + + + I+ TV +N +VD + + E + +++
Sbjct: 337 VTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDS 396
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M GC PD VT+ T+++ Y G + E
Sbjct: 397 MVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 47/351 (13%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI------- 70
MV+ GC AN +FT L++ R G +A +L++ M QPD TY ++
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLG 59
Query: 71 -------------KSCLKAFAFD---------------KVQALLSDMSTQGIRPNTVTYN 102
+S +KA K Q + ++M +GI PN +TYN
Sbjct: 60 DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
+ID Y +++ E L M+ + +PDV T + + AF G++ E+ Y +
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA------ 216
I P+ T++ ++D + K E + + M S I+T N +ID RA
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 217 -----GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
G++ + LF+ M S + P VT +L+ GK EK + + S + L
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
DT N +++ + E + + G + D VTY ++ + G
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEG 350
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 159/375 (42%), Gaps = 48/375 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L + M++ D + +F+AL++A+ + G A L M + P TYS +I
Sbjct: 134 AEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR-NIFPTTITYSSMI 192
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM-----FAEMELTLV--- 122
K + + + M ++G P+ +T NTLID RAK F ++ V
Sbjct: 193 DGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQD 252
Query: 123 ---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA----------------- 162
+M+S PD+ T N L +G+++ + ++ FQ +
Sbjct: 253 LFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMC 312
Query: 163 ------------------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G++ + T+NIL+ + K G+F + + M + V
Sbjct: 313 KGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTV 372
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TYN ++D F + L++ + M SE P VT +L++ Y AG+ + + +
Sbjct: 373 TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEM 432
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-M 323
++ DT+ +N L+ + ++ + + E M G PD +T+R+M+ T +
Sbjct: 433 CQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAEL 492
Query: 324 KNHAKEFQDLVEKMD 338
+ +DL + +D
Sbjct: 493 QKGLTMLEDLQKSVD 507
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA E+F+ D +T + +++ + D+A+ L + + DV TY+I
Sbjct: 283 EKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLP-VNGVETDVVTYNI 341
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K F + + + +M +GI P+TVTYN+++D + + E + M+SE
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T + ++ + +G++D + + + G+ T+N L+ + K G
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
+ E M +T+ ++ +L++
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQK 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 88/211 (41%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ C +V T + G++ ++ G QP T+ +++ K G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ M + +V Y+ ++D + G+ + + +F M + I P+ +T
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ Y GK +LR + +I D V F+ L++A+ + + + + M +R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
P +TY +M+ + + AK DL+
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLM 211
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 158/333 (47%), Gaps = 7/333 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--TP---DCQPDVN 64
+A LF M GC N ++ L+ R+G + A L + M N +P +C+P++
Sbjct: 179 EATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIF 238
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+Y+I+I K + + + L ++M QG+RP+ VT++ LID + M E + L M
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PD++T + F G +D+ ++ + S G +P + ++ +L+ Y K +
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ + M + + T+ +++ AG + + LF +++ + P + +CS+
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAV-PKNLYICSV 417
Query: 245 -VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ G + + + + ++ LD FNCL+D + + + E + Q G
Sbjct: 418 FLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEG 477
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+PD VTY M+ + NG ++A ++E+
Sbjct: 478 LQPDVVTYCIMINGFCKNGQVDNANILFQMMEE 510
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 44/337 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+GK K+ A LF MVD+G + +F+AL+ + G+ +A LE M P
Sbjct: 250 IGKWKE---AKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMM-LRGIVP 305
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ T++ LI+ D + L M ++G P+ ++Y LI Y + E
Sbjct: 306 DLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ML PD+ T L+ +G++ +K + + + ++ ++ LD K
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425
Query: 182 G-HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G FE M E ++ Y+ I ++N +ID +A L+ LF + E ++P VT
Sbjct: 426 GCLFEAMELFNE-LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
C ++ + G+ +DN++I+ ++M+
Sbjct: 485 YCIMINGFCKNGQ----------VDNANILF-------------------------QMME 509
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ GC P+ +TY ++ + N N +E L+ KM
Sbjct: 510 ENGCTPNLLTYSALLHGFYKN---NKLEEVVKLLHKM 543
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 13/316 (4%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
SF LL A + + + FSL + M + P+ T +ILI +CL ++V+ LS
Sbjct: 93 SFNLLLGALAKIKHYSQVFSLYKKM-HLAGLSPNFFTLNILI-NCL--CNVNRVREGLSA 148
Query: 89 MS---TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M+ +G P+ VTY +LI +E ++M C P+V T ++
Sbjct: 149 MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 208
Query: 146 SGQIDTMEKCYEKFQSA------GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+G I+ K +++ + +P+I ++NI++D K G +++ + M
Sbjct: 209 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VT++ +ID + G + + + M I P T SL+ + G +
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + + D + + L+ Y + E + M + G PD T+ +++
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388
Query: 320 TNGMKNHAKEFQDLVE 335
G AK+ +V+
Sbjct: 389 LAGKVGDAKKLFGVVK 404
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 38/257 (14%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A ELF +M +G + + S+T L+ Y ++ ++A L M PD+ T+ +
Sbjct: 324 DSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGK-WPDMKTFCV 382
Query: 69 LIKSCL---------KAFAFDKVQA--------------------------LLSDMSTQG 93
L+K K F K A L +++ +
Sbjct: 383 LLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYN 442
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
++ + ++N LID +A+ K+ E +PDV T + F +GQ+D
Sbjct: 443 MKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNAN 502
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
++ + G P++ T++ LL + K E++ ++ M + S Y IV D
Sbjct: 503 ILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMV 562
Query: 214 GRAGDLKQMEYLFRLMR 230
+ D K E+L L R
Sbjct: 563 SK--DEKCREWLDILQR 577
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 95/240 (39%), Gaps = 6/240 (2%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
+ +++N L+ A + K ++++ KM P+ +T+N + N ++
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G P + T+ L+ + + + MQK +VTY +I R
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 217 GDLKQMEYLFRLMRSE------RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
G++ L + M + KP+ + ++ GK ++ + + + +
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D V F+ L+D + E K LE M RG PD T+ +++ + G + AKE
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 154/305 (50%), Gaps = 9/305 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A S+ +H+ + +P + TY+IL+ + F+ + +LL+++ G+RP+++ +N L
Sbjct: 85 QAHSVFKHLMDEGH-KPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNAL 143
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG- 163
I+A+ AK E T KM C P T N ++ +G G+ + ++ ++ G
Sbjct: 144 INAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGS 203
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
++P++ T+NIL+ ++ + E+ V+ MQ + IVTYN + A+ + + E
Sbjct: 204 VRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAE 263
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
L +++ R++ S T ++ Y G+ E+ ++ + ++ + + V FN L+ +
Sbjct: 264 ELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGF 322
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
A + +L +M++ G KPD VTY + +S+ G H + + +KM E +
Sbjct: 323 LDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLG---HMAKCMHVFDKMIEAGI- 378
Query: 344 MKRPD 348
PD
Sbjct: 379 --EPD 381
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 4/346 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ +A F M GC T +F L+ YG G +++ + + M +P++
Sbjct: 149 EAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNL 208
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+K+ ++ ++ M G P+ VTYNT+ AY E +V+
Sbjct: 209 TTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVE 268
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + T + + G+++ +C ++ + AG P++ FN LL + A
Sbjct: 269 IQTR-VRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAND 327
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M+K+ IVTY+ ++ F G + + ++F M I+P
Sbjct: 328 MAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSI 387
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + + A +PEK +L + + + + V F ++ + + V + M + G
Sbjct: 388 LAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSG 447
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P+ T+ T++ YS A+E +++ M ET + K+ +
Sbjct: 448 VYPNLRTFETLIWGYSEQKQPWKAEE---VLQMMRETGVKPKQSTY 490
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+RA +S + ++ G +PS+ T+ ILL + FE + +++ ++
Sbjct: 74 MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +N +I+AF A + + F M+ P+ T +L++ YG GKPE+
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193
Query: 260 VLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V + + + +N LV A+ + E GV+ MQ G +PD VTY T+ AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253
Query: 319 STNGMKNHAKEF 330
+ N A+E
Sbjct: 254 ANNDETWRAEEL 265
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 1/230 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ ++ Y R G ++A ++ MK+ P+V ++ L+K L A V +L
Sbjct: 278 RTWGIIIGGYCREGRLEEALRCVQQMKDAGSV-PNVVIFNTLLKGFLDANDMAAVNKILG 336
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI+P+ VTY+ ++ + A+ KM+ EPD + + F +
Sbjct: 337 LMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQ 396
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q + E + G+ P++ TF ++ + E V + M K + T+
Sbjct: 397 QPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFE 456
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+I + + E + ++MR +KP T C + A+ G E +
Sbjct: 457 TLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENI 506
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 2/275 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G + + ++ + SAY + +A L+ ++ + T+ I
Sbjct: 225 EEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR--VRTSERTWGI 282
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + ++ + M G PN V +NTL+ + A A + L M
Sbjct: 283 IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFG 342
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L F + G + ++K AGI+P ++IL + +A EK
Sbjct: 343 IKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAE 402
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M +VT+ VI + D++ ++ M + P+ T +L+ Y
Sbjct: 403 DLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGY 462
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + + + + + DA+
Sbjct: 463 SEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAW 497
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 4/330 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+ E+FQ V G N +F L+ Y ++A L+ M C PD TY+ ++
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEY-GCCPDNVTYNTVL 253
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K +V+ LL M G+ PN TYN L+ Y + K E + M +
Sbjct: 254 TALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGML 313
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDVWT N +R + G+ID + +K +S + P + T+N L+D + + +
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKL 373
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M+ VT+NI+I F G + + + M P C T +++ Y
Sbjct: 374 VEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCK 433
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AGK + ++ + + LDT N L+ K + + ++RG D+VT
Sbjct: 434 AGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVT 493
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Y T++ Y + + A + L E+M ET
Sbjct: 494 YGTLIMGYFKDEQADRALK---LWEEMKET 520
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 148/340 (43%), Gaps = 24/340 (7%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A L M + GC + ++ +L+A + + LL MKN+ P+ NTY+I
Sbjct: 228 EEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS-GLFPNRNTYNI 286
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K + ++ M+ +G+ P+ TYNT++ E KM S
Sbjct: 287 LVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346
Query: 129 CEPDVWTMNCTLRA-FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PDV T N + F + G D K E+ ++ G++ + T NI++ + G ++
Sbjct: 347 LVPDVVTYNTLIDGCFEHRGS-DAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEA 405
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR- 246
S VM M + +S TYN +I+ + +AG + + + M + +K TL +L+
Sbjct: 406 SNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHT 465
Query: 247 ---------AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
AY K K G + LD V + L+ Y + + + E
Sbjct: 466 MCLEKQLDDAYTLTMKARKRGYI----------LDEVTYGTLIMGYFKDEQADRALKLWE 515
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
M++ G +TY T++R +G + A + +L+EK
Sbjct: 516 EMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 152/397 (38%), Gaps = 71/397 (17%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K ++A E+ + M +G + ++ ++ G D+A L + M++ PDV
Sbjct: 293 KLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESF-KLVPDV 351
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI C + D L+ +M +G++ N VT+N +I + E +VK
Sbjct: 352 VTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVK 411
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS------ 177
M+ PD +T N + + +G++ K ++ G++ T N LL +
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ 471
Query: 178 ----------------------YGK--AGHFEKMSA-----VMEYMQKYHYSWTIVTYNI 208
YG G+F+ A + E M++ TI+TYN
Sbjct: 472 LDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNT 531
Query: 209 VIDAFGRAGDLKQ--------------------------------MEYLFRL---MRSER 233
+I +G Q +E F+ M
Sbjct: 532 IIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHS 591
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+KP T L+R G EK ++ + +DTV +N ++ ++ + + +
Sbjct: 592 LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAF 651
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ M+ + +PD+ TY +V + G A++
Sbjct: 652 DLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL 688
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 23/274 (8%)
Query: 69 LIKSCLKAFAFDKVQAL----LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ + L A+ K L + M RPN +T NTL++A R+ + L +
Sbjct: 140 LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSN--SSHSLVFSRE 197
Query: 125 LSEDC-----EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +D +P+V T N + + + + + + G P T+N +L +
Sbjct: 198 VFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALC 257
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K ++ ++ M+ TYNI++ + + LK+ + LM + + P
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG----- 294
T ++VR GK ++ + +++ ++ D V +N L+D CF E +G
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-----CF-EHRGSDAAF 371
Query: 295 -VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++E M+ RG K + VT+ M++ + T G + A
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEA 405
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFS----LLEHMKNTPDCQPD 62
+ ++A + ++++G + + ++ Y G +KAF ++EH +PD
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEH-----SLKPD 595
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T +IL++ + +K L + ++G +TVTYN +I ++ + + + +
Sbjct: 596 IFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMT 655
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+M ++ EPD +T N + +G+ + EK KF G Q
Sbjct: 656 EMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQ 698
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 152/329 (46%), Gaps = 2/329 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +KA+ LF M+ +G + ++++L+ ++ +KA ++L+HM + P+ TY
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDK-GVMPNTRTY 276
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I+I+ ++ LL MS G++P+ VTY LI Y + AE M+
Sbjct: 277 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVR 336
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ +P+ + L + G + + + GI FNIL+ +Y K G +K
Sbjct: 337 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 396
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
M++ +V+Y+ VI + G ++ Y F M SE + P+ ++ SL+
Sbjct: 397 AMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 456
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ +K+ + + N I D +F N ++D + E + +++ G KP
Sbjct: 457 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 516
Query: 307 DKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ V+Y T++ Y G M K+F +V
Sbjct: 517 NVVSYNTLIDGYCFVGKMDESIKQFDRMV 545
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 2/319 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--DCQPDVNTYSILIK 71
+F+ M + G + S+ AL+ +A LL HM +C P+V +YS +I
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K DK L +M QG P+ VTY++LID +A+ + E L M + P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ T N +R + + GQ++ + +K +G+QP + T+ +L+ Y K G + +V
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M + Y+I++ + G L + L LM + I L+ AY
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G +K + + + + D V ++ ++ ++ + M G P+ +++
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Query: 312 RTMVRAYSTNGMKNHAKEF 330
+++ + G +E
Sbjct: 452 TSLIHGLCSIGEWKKVEEL 470
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 138/321 (42%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + KA + Q M D+G NT+++ ++ Y G ++A LL+ M + QP
Sbjct: 248 LCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS-GLQP 306
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY +LI+ K + +++ M +G +PN+ Y+ L+ Y ++ L
Sbjct: 307 DVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 366
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + + N + A+ G +D + + + G++P + +++ ++ K
Sbjct: 367 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKI 426
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E M S I+++ +I G+ K++E L M + I P + +
Sbjct: 427 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 486
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ G+ + + + + + V +N L+D Y + E + M
Sbjct: 487 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS 546
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
G +PD TY ++ Y NG
Sbjct: 547 IGLRPDSWTYNALLNGYFKNG 567
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 151/371 (40%), Gaps = 46/371 (12%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+L M+ +G ++F L+ AY + G DKA + M+ +PDV +YS +I
Sbjct: 362 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN-GLRPDVVSYSTVI 420
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K + + M ++G+ PN +++ +LI + ++E +M++
Sbjct: 421 HILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 480
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD MN + G++ + ++ G++P++ ++N L+D Y G ++
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M TYN +++ + + G ++ L+R M + +K +T ++
Sbjct: 541 FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQ 600
Query: 251 AG----------KPEKLGSVLRF-------------------------IDNSDIMLDTVF 275
AG K G+ LR + + + LD
Sbjct: 601 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWT 660
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
FN +++A ++ E K + M RG P +TY M+++ G L+E
Sbjct: 661 FNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEG----------LLE 710
Query: 336 KMDETCLAMKR 346
+ D+ L+M++
Sbjct: 711 ESDDLFLSMEK 721
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 142/339 (41%), Gaps = 13/339 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDK-------AFSLLEHMKNTPDCQP 61
E A LF ++ + A+ +F ++L+ R+ A SL M +
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90
Query: 62 DVNTY--SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-ME 118
N Y ILI+ D A + G R VT N LI K + M+
Sbjct: 91 AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAGIQ--PSINTFNILL 175
+ +M PDV++ N ++ + +E G P++ +++ ++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
D + K G +K + + M + +VTY+ +ID +A + + E + + M + +
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ T ++R Y G+ E+ +L+ + S + D V + L+ Y ++ AE + V
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ M ++G KP+ Y ++ Y+T G ++ DL+
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 120/315 (38%), Gaps = 36/315 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + E A F MV EG N SFT+L+ G + K L M N
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-GIH 480
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD + ++ + K + Q + G++PN V+YNTLID Y E
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQID------------------------------ 150
+M+S PD WT N L + +G+++
Sbjct: 541 FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQ 600
Query: 151 -----TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ Y K G Q I T+N +L + ++ + E ++ + + T
Sbjct: 601 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWT 660
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+NIVI+A + G + + + LF M P +T ++++ G E+ + ++
Sbjct: 661 FNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSME 720
Query: 266 NSDIMLDTVFFNCLV 280
+ D+ N ++
Sbjct: 721 KNGCAADSHMLNVII 735
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 8/295 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A +L+ + + CQPDV TY+ LI + KA + +L+ + +G+ PN+ TY L
Sbjct: 449 RAMEVLDEL-SLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCIL 507
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+ + + +AE+ L M +CEPDV N + F G +D EK S
Sbjct: 508 LHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKC 567
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
P I T+N LL++ K G E+ + ++++ + ++TYN +IDA G++K+
Sbjct: 568 CPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMV 627
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY- 283
LF M S RI P +T SLV + E+ +L + T F ++ A
Sbjct: 628 LFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALC 687
Query: 284 --GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVE 335
G+++ AE +L VM + Y ++VR + +G A+ Q+L++
Sbjct: 688 RDGKVEAAAE---ILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAERLHQELID 739
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD LI+ +K +K + +L M G P+T+T N LI R +
Sbjct: 324 PDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQLSSAMSV 383
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M P+ T N +R N D +++ G P + T +L+D K
Sbjct: 384 LEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTLLVDLICK 443
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ V++ + +VTYN +I A +A LK + + + +E ++P+ T
Sbjct: 444 KCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTT 503
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
C L+ + + + ++ +L + ++ D +N ++ + + + VLE M
Sbjct: 504 YCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMV 563
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA 327
C PD VTY T++ A S GM A
Sbjct: 564 SDKCCPDIVTYNTLLNAISKEGMVEEA 590
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 9/306 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA----FAFDKVQA 84
S+T+L++AY R+ L ++A +LL+ MK T P TY+ ++ +C +A FD +
Sbjct: 176 SYTSLIAAYARNALHEEARALLDQMKAT-GVAPTAATYNTVLAACARATDPPVPFDMLLG 234
Query: 85 LLSDM---STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L ++M ++ +RP+ TYNTL+ A + + E+ L ML PD + +
Sbjct: 235 LFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD 294
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
AF ++G + + + + + G + + L++++ + G AV+ MQ +
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T TY +++D +GR G + LFR MR+ + P T L R +G G +++ +
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELF 413
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + D V ++ A G + + VLE M + G P Y +V A
Sbjct: 414 HDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHA 473
Query: 322 GMKNHA 327
M A
Sbjct: 474 AMYEEA 479
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 3/313 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ELF M G A+ ++ L+ A+ R G A ++L M+ C P TY +L
Sbjct: 304 RAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ-ADGCAPTAATYRVL 362
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + FD V+ L +M T + P+T TYN L +G F E+ ML
Sbjct: 363 LDLYGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGV 421
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD+ T + A G+ G + E G+ P+ + + L+++ G A +E+
Sbjct: 422 QPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYV 481
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTLCSLVRAY 248
M + T+ TYN + A+ R G ++ E +F R+ + I+ S + +L+ AY
Sbjct: 482 AFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAY 541
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + + S D +++AY E K E +Q P
Sbjct: 542 CQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSV 601
Query: 309 VTYRTMVRAYSTN 321
+ Y M+ Y+ N
Sbjct: 602 IAYCMMLSLYARN 614
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 35/179 (19%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG E+A+ F M + G +++ AL AY R GLF +A ++ M N
Sbjct: 470 LGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSN------ 523
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
GI+ + +++ LI+AY + +
Sbjct: 524 -----------------------------NAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++M PD ++ L A+ +G ID ++ +E+ QS+ PS+ + ++L Y +
Sbjct: 555 MEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYAR 613
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 12/347 (3%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A +F MV EGCD N+ +++ L++ G D+A +LE M
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-G 298
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V TY++ I + ++ L++ M +G RPN TY LI R ++E
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 355
Query: 119 LTL---VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + KML E P+ T N + G+ T K + + G + T+N ++
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
G EK + E M K T+VTYN +I+ + G++ L LM+ +
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P T LV + GK E + + + + V + L+D + + +
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
L+ M++ GC P+ +Y ++ S +N E + + +KM E L
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSK---ENRFSEAEKICDKMVEQGL 579
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 1/309 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++T+L+ + R+ D AF + + M C P+ TYS LI D+ +L +
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +GI P TY I A + E + +M C P+V T + G+
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ Y K G+ P+ T+N L++ G F + +M+ + TYN
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I GD+++ LF M P+ VT +L+ Y G +L + +
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N LV + + + M + G P+ V+Y ++ +S +G + A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 329 EFQDLVEKM 337
+E+M
Sbjct: 534 SLLKRMEEM 542
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 14/341 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A ++F M G ANTQ++ ++ G +KA L E M K P P V TY+ L
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP--LPTVVTYNTL 449
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I L + LL M G P+ TYN L+ + + +M+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + + G++D ++ + G P++ ++N +++ K F +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY- 248
+ + M + ++TY +ID R G + +F M + P+ T SL+
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629
Query: 249 --GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G A + E++ + + LDT ++ LV R F E + +++ M++RG P
Sbjct: 630 QEGKADEAERMSEI-----GCEPTLDT--YSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 682
Query: 307 DKVTYRTMVRAYSTNGMKNHA-KEFQDLVEKMDETCLAMKR 346
D+ Y +++ A+ N +HA K F + K + L++ R
Sbjct: 683 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 8/270 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A ++ MV++G N ++T L+ R+G AF + M+ C P
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLP 616
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TYS LI + D+ + MS G P TY+TL+ R F E E +
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 672
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M PD L A + ++D K + ++ G Q ++ + L+ + KA
Sbjct: 673 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 732
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E+ A+ + M + ++ + + +++D + G+L L +M S+ P+ T
Sbjct: 733 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Query: 242 CSLVRAYGHAGK---PEKLGSVLRFIDNSD 268
L R GK E L L+ + +S+
Sbjct: 793 VILGRELSRIGKSIESEPLADKLKVLKDSN 822
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 35/287 (12%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L M GI+P+ +T+NTLI+ + E EL L ++ D PDV+T +
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ +D +++ G P+ T++ L++ G ++ ++E M + T+
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY + I A ++ L M+ +P+ T +L+ GK E + +
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364
Query: 265 DNSDIMLDTVFFNCLVDAY---GR----LKCFAEMKG----------------------- 294
++ +TV +N L++ GR LK F M+G
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424
Query: 295 -----VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ E M + G P VTY T++ Y T G N+A DL+++
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%)
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+++ N L ++ Y++ ++GIQPS+ TFN L++ K G + ++
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
+ +Y S + TY +I R +L +F M E P+ VT +L+ + G
Sbjct: 223 QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++ +L + I + + A ++ E ++ M++RGC+P+ TY
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342
Query: 313 TMVRAYSTNG 322
++ S G
Sbjct: 343 ALISGLSRLG 352
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/297 (17%), Positives = 112/297 (37%), Gaps = 16/297 (5%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N F ++L+ R D+ F+ +H++ ++IK+C +V
Sbjct: 107 NMNCFISMLNRLVR----DRVFAPADHIR------------ILMIKACRNEEEIRRVADF 150
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L+++S G + + NTL+ + +M +ML+ +P + T N +
Sbjct: 151 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 210
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G++ E + + P + T+ L+ + + + + V + M K VT
Sbjct: 211 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVT 270
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +I+ G + + + M + I+P+ T + A E+ ++ +
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + L+ RL G+ M + G P+ VTY ++ G
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ +++ + N ++ + ++ L++ M + I+PS +T +L+ GK +
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 218
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L I D+ D + L+ + R + GV + M + GC P+ VTY T++
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI--- 275
Query: 319 STNGMKNHAK--EFQDLVEKMDE 339
NG+ N + E D++E+M E
Sbjct: 276 --NGLCNEGRVDEALDMLEEMIE 296
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 12/347 (3%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A +F MV EGCD N+ +++ L++ G D+A +LE M
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-G 298
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V TY++ I + ++ L++ M +G RPN TY LI R ++E
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 355
Query: 119 LTL---VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + KML E P+ T N + G+ T K + + G + T+N ++
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
G EK + E M K T+VTYN +I+ + G++ L LM+ +
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P T LV + GK E + + + + V + L+D + + +
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
L+ M++ GC P+ +Y ++ S +N E + + +KM E L
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSK---ENRFSEAEKICDKMVEQGL 579
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 145/326 (44%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + + E A L+ M+ EG NT ++ AL++ G F A + M+
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA- 406
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY+ +IK +K L M G P VTYNTLI+ Y L
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M CEPD WT N + F G++++ +++ G+ P+ ++ L+D + K
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + ++++ M++ + + +YN VI+ + + E + M + + P+ +T
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ G+ + + ++ + + ++ L+ + E + +L+ M++
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
+G PD+VT+ +++ + G +HA
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHA 672
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 3/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A ++F M G ANTQ++ ++ G +KA L E M K P P V TY+ L
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP--LPTVVTYNTL 449
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I L + LL M G P+ TYN L+ + + +M+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ + + G++D ++ + G P++ ++N +++ K F +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M + ++TY +ID R G + +F M + P+ T SL+
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK ++ +L+ ++ + D V F L+D + L +L M GCKP+
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689
Query: 310 TYRTMVRA 317
TY +++
Sbjct: 690 TYSVLLKG 697
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 1/309 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++T+L+ + R+ D AF + + M C P+ TYS LI D+ +L +
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +GI P TY I A + E + +M C P+V T + G+
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ Y K G+ P+ T+N L++ G F + +M+ + TYN
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I GD+++ LF M P+ VT +L+ Y G +L + +
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D +N LV + + + M + G P+ V+Y ++ +S +G + A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 329 EFQDLVEKM 337
+E+M
Sbjct: 534 SLLKRMEEM 542
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 35/292 (11%)
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ + L M GI+P+ +T+NTLI+ + E EL L ++ D PDV+T
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + +D +++ G P+ T++ L++ G ++ ++E M +
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
T+ TY + I A ++ L M+ +P+ T +L+ GK E
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAY---GR----LKCFAEMKG------------------ 294
+ + ++ +TV +N L++ GR LK F M+G
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419
Query: 295 ----------VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ E M + G P VTY T++ Y T G N+A DL+++
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A FQ MV+ G + N S+TAL+ + + G D A SLL+ M+ C P+V +Y+
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-GCNPNVESYNA 553
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVT---------------------------- 100
+I K F + + + M QG+ PN +T
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 101 -------YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
Y++LI + E E+ L +M + PD T + F G+ID
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGK 180
+ G +P+ T+++LL K
Sbjct: 674 LLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%)
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+++ N L ++ Y++ ++GIQPS+ TFN L++ K G + ++
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ +Y S + TY +I R +L +F M E P+ VT +L+ +
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ ++ +L + I + + A ++ E ++ M++RGC+P+ TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341
Query: 312 RTMVRAYSTNG 322
++ S G
Sbjct: 342 TALISGLSRLG 352
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/297 (17%), Positives = 112/297 (37%), Gaps = 16/297 (5%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N F ++L+ R D+ F+ +H++ ++IK+C +V
Sbjct: 107 NMNCFISMLNRLVR----DRVFAPADHIR------------ILMIKACRNEEEIRRVADF 150
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
L+++S G + + NTL+ + +M +ML+ +P + T N +
Sbjct: 151 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 210
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G++ E + + P + T+ L+ + + + + V + M K VT
Sbjct: 211 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVT 270
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y+ +I+ G + + + M + I+P+ T + A E+ ++ +
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + L+ RL G+ M + G P+ VTY ++ G
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ +++ + N ++ + ++ L++ M + I+PS +T +L+ GK +
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 218
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L I D+ D + L+ + R + GV + M + GC P+ VTY T++
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI--- 275
Query: 319 STNGMKNHAK--EFQDLVEKMDE 339
NG+ N + E D++E+M E
Sbjct: 276 --NGLCNEGRVDEALDMLEEMIE 296
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + + A ++F M C N ++++L+ + G D+A LL+ M+
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK-GLA 650
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL- 119
PD T++ LI + D LL M G +PN TY+ L+ + + E ++
Sbjct: 651 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIF 710
Query: 120 TLVKMLSEDCEP 131
LV C P
Sbjct: 711 PLVDNYFLGCNP 722
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 8/278 (2%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P KA E F+ M + GC + +++A++ AYGR+G D A L + + T + D T+S
Sbjct: 227 PNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRAR-TEKWRIDPVTFS 285
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI+ + FD + +M G++PN V YNTL+DA GRAK + + +M +
Sbjct: 286 TLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNN 345
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+P T LRA+G + + Y++ + G++ S+ +N LL G+ E+
Sbjct: 346 GLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEA 405
Query: 188 SAVMEYMQKYHY----SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+A+ E M+ SW T++ +I + +G + + E + M +P+ L S
Sbjct: 406 AAIFEDMKSSGNCMPDSW---TFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTS 462
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
L++ YG A + +++ + DI D F C+++
Sbjct: 463 LIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLN 500
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 14/322 (4%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-----------QP--DVNTYS 67
+ C+A + + +L G L A +L +M N +P +V Y+
Sbjct: 121 DSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYN 180
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+ +K K D+ + L +M +G++P+ +T++T+I + + + KM
Sbjct: 181 VTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEF 240
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C PD T + + A+G +G +D K Y++ ++ + TF+ L+ YG +G+F+
Sbjct: 241 GCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGC 300
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V E M+ +V YN ++DA GRA Q + +++ M + ++PS T +L+RA
Sbjct: 301 LNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA 360
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG-CKP 306
YG A E V + + + L V +N L+ + E + E M+ G C P
Sbjct: 361 YGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMP 420
Query: 307 DKVTYRTMVRAYSTNGMKNHAK 328
D T+ +++ YS +G + A+
Sbjct: 421 DSWTFSSLITIYSCSGKVSEAE 442
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+ K+P +A +++ M + G + ++ ALL AYGR+ + A + + MK +
Sbjct: 326 MGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEK-GLEL 384
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELT 120
V Y+ L+ C ++ A+ DM + G P++ T+++LI Y + +E E
Sbjct: 385 SVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAM 444
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L ML EP+++ + ++ +G + + D + + +++ I P
Sbjct: 445 LNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITP 490
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 44/341 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A LF MVDEG N +F L+ A ++G ++A LL+ M + PD TY+
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNT 348
Query: 69 LIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI CL+ D + L M ++GI + V+YN LI+ Y ++ E + +M+ +
Sbjct: 349 LIDGFCLEG-RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ P V T N L G++ + + + + P T+NILLD K H +
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEA 467
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ Y++ + + +I +N +ID +A ++ LF + E ++P+ +T ++
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+G+ E + D+ L M+++GC P+
Sbjct: 528 LCKSGQLE---------NAKDLFLG--------------------------MEEKGCAPN 552
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
VT+ T++R + N E Q +VE + E PD
Sbjct: 553 LVTFNTLMRGFCQN------DEMQKVVELLQEMAEKDFSPD 587
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 8/334 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G K+ E A +F ++D SF LL A + + SL + M + PD
Sbjct: 69 GHIKRSE-AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM-SLIGLAPD 126
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T +ILI D A+L +M +G PNTVT+ +L+ +E L
Sbjct: 127 FITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLR 186
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------IQPSINTFNILLD 176
KM+ P+V T L +G K +E+ + I+P++ + ++D
Sbjct: 187 KMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIID 246
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
S K G +K + M+ S +V Y+ +I G + + LF M E + P
Sbjct: 247 SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP 306
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT L+ A AGK E+ +L+ + DT +N L+D + + + +
Sbjct: 307 NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF 366
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ +G + D V+Y ++ Y +G AK+
Sbjct: 367 VSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 7/327 (2%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKA 76
M+ G NT +FT+L+ +A LL M +P+V TY L+ C+
Sbjct: 153 MLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM-GYRPNVVTYGTLLNGLCMTG 211
Query: 77 FAFDKVQALLSDMSTQG-----IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
V+ ++ G I+PN V Y T+ID+ + + + + ++M P
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISP 271
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
DV + + ++G+ + + + + G+ P++ TFN+L+D+ KAG E+ + ++
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL 331
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M + S TYN +ID F G + LF M S+ I+ V+ L+ Y +
Sbjct: 332 KLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKS 391
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ + + R + +IM + +N L+ R + + M+ P+ TY
Sbjct: 392 GRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY 451
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMD 338
++ N + A E +E D
Sbjct: 452 NILLDGLCKNNHLSEAMELFHYLENHD 478
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 1/302 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A+ L + M+ G +T ++ L+ + G D A L M+ + +
Sbjct: 318 LCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME-SKGIET 376
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +Y++LI K+ + + L +M + I P +TYNTL+ R +
Sbjct: 377 DAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLF 436
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M D P+ T N L + + + + ++ QPSI FN L+D KA
Sbjct: 437 GEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKA 496
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
E + + ++TY ++I ++G L+ + LF M + P+ VT
Sbjct: 497 RKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+R + + +K+ +L+ + D D + +VD + + + E +L
Sbjct: 557 NTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPA 616
Query: 302 RG 303
+G
Sbjct: 617 QG 618
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 117/323 (36%), Gaps = 49/323 (15%)
Query: 54 KNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL-----LSDMSTQGIRPNTVTYNTLIDAY 108
K+T PD +KS K+ + +A L DM P ++NTL+ A
Sbjct: 46 KDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPT---PPISSFNTLLGAV 102
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ K + ++ +M PD T+N + + N ++D + G P+
Sbjct: 103 AKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNT 162
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
TF L+ + + ++ M + Y +VTY +++ G+ L
Sbjct: 163 VTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222
Query: 229 MRSER------IKPSCVTLC-----------------------------------SLVRA 247
M + IKP+ V C S++
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
H G+ E + + + + + V FN L+DA + E +L++M QRG PD
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
TY T++ + G + A++
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDL 365
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 145/322 (45%), Gaps = 1/322 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+K + + M+D+ N ++ ++++A ++ DKA +L M + PD TY+
Sbjct: 105 DKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNS 163
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + + L M + G+ P+ VTYN+L+D + E M
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P++ T L+ + G + M + GI P+ F+IL+ +Y K E+
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M++ + VTY VI ++G ++ F M E + P + SL+
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
K E+ ++ + + I L+T+FFN ++D++ + E + + ++M + G KPD
Sbjct: 344 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 403
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
+TY T++ Y G + A +
Sbjct: 404 ITYSTLIDGYCLAGKMDEATKL 425
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 140/336 (41%), Gaps = 5/336 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYS 67
E A +F ++ G + S+ LL+ +A LL M + DC PDV +YS
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I K DK + ++M Q I PN VTYN++I A +A+ + L M+
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N + F +SGQ +K +S G++P + T+N L+D K G +
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M K I TY ++ + G L +M L LM I P+ LV A
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y K E+ V + + + V + ++ + + E M G P
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE-TCL 342
+ Y +++ T A+E ++E +D CL
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEEL--ILEMLDRGICL 366
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 142/324 (43%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
QP++A + M +G + + ++ +L+ ++G +A + + M +P++ TY
Sbjct: 173 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPEITTY 231
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L++ A ++ LL M GI PN ++ L+ AY + + E L KM
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 291
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ P+ T + SG+++ +E+ G+ P +N L+ +E+
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 351
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ M + +N +ID+ + G + + E LF LM +KP +T +L+
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 411
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y AGK ++ +L + + + D V ++ L++ Y ++ + + M+ G P
Sbjct: 412 GYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSP 471
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
D +TY +++ AKE
Sbjct: 472 DIITYNIILQGLFQTRRTAAAKEL 495
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 143/332 (43%), Gaps = 5/332 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G ++ LL Y G + LL+ M P+
Sbjct: 207 GRCTE---ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 262
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SIL+ + K ++ + S M QG+ PN VTY +I ++ + L
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E P N + + + E+ + GI + FN ++DS+ K G
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + + M + I+TY+ +ID + AG + + L M S +KP CVT
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ Y + + + R +++S + D + +N ++ + + A K + + +
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
G + + TY ++ N + + A + FQ+L
Sbjct: 503 GRQLELSTYNIILHGLCKNKLTDDALRMFQNL 534
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 143/369 (38%), Gaps = 46/369 (12%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H L MV G N F+ L+ AY + ++A + M+ P+ TY +I
Sbjct: 248 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGAVIG 306
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
K+ + M +G+ P + YN+LI + E +++ML
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 366
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ N + + G++ EK ++ G++P I T++ L+D Y AG ++ + ++
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY--- 248
M VTY+ +I+ + + +K LFR M S + P +T +++
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486
Query: 249 -------------GHAGKPEKLGS----------------VLRFIDN---SDIMLDTVFF 276
+G+ +L + LR N D+ L+ F
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546
Query: 277 NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
N ++DA ++ E K + G P+ TYR M G L+E+
Sbjct: 547 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG----------LLEE 596
Query: 337 MDETCLAMK 345
+D+ L+M+
Sbjct: 597 LDQLFLSME 605
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 3/279 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ ++ +LF MV G + +++ L+ Y +G D+A LL M + +PD
Sbjct: 379 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPD 437
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS LI K L +M + G+ P+ +TYN ++ + + A + V
Sbjct: 438 CVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 497
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+ + ++ T N L + D + ++ ++ TFNI++D+ K G
Sbjct: 498 GITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 557
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ + TY ++ + G L++++ LF M L
Sbjct: 558 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 617
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+VR G+ + G+ L ID L+ + +D
Sbjct: 618 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 656
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ D + ++++L++ + D+A + E M + DC P+V TY+ L
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTL 402
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK KA D+ L +MS +G+ NTVTY TLI + +A+ ++ +M+S+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD+ T + L N+G+++T +E Q + ++P I T+NI+++ KAG E
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +VTY ++ F R G ++ + LFR M+ E P T +L+RA+
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 250 HAGKPEKLGSVLR 262
G ++R
Sbjct: 583 RDGDKAASAELIR 595
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 1/312 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L MV+ G ++ +F L+ R +A +L++ M CQPD+ TY I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVV 228
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D +LL M I P V YNT+IDA K + +M ++
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T N +R N G+ + I P++ TF+ L+D++ K G + +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M K I TY+ +I+ F L + +++F LM S+ P+ VT +L++ +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
A + ++ + R + ++ +TV + L+ + + + + V + M G PD +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 311 YRTMVRAYSTNG 322
Y ++ NG
Sbjct: 469 YSILLDGLCNNG 480
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 1/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N ++ TYSI
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSI 121
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L+ M G P+ VT N+L++ + ++ + +M+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD +T N + + ++ G QP + T+ I+++ K G +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++++ M++ +V YN +IDA ++ LF M ++ I+P+ VT SL+R
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V F+ L+DA+ + E + + + M +R PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY +++ + + + AK +L+ D
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 140/321 (43%), Gaps = 38/321 (11%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNTYSIL 69
A L M++ + N +F+AL+ A+ + G +A L + M K + D PD+ TYS L
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSL 367
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I D+ + + M ++ PN VTYNTLI + +AK E +M
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ T + F + + D + +++ S G+ P I T++ILLD G E
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V EY+Q+ I TYNI+I+ +AG ++ LF + + +KP+ VT +++ +
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G E+ ++ R EMK + G PD
Sbjct: 548 RKGLKEEADALFR----------------------------EMK-------EEGPLPDSG 572
Query: 310 TYRTMVRAYSTNGMKNHAKEF 330
TY T++RA+ +G K + E
Sbjct: 573 TYNTLIRAHLRDGDKAASAEL 593
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 36/179 (20%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRS----------------------- 40
K K+ ++ ELF+ M G NT ++T L+ + ++
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 41 ------------GLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
G + A + E+++ + +PD+ TY+I+I+ KA + L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+S +G++PN VTY T++ + R + E + +M E PD T N +RA G
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E +LF ++ +G N ++T ++S + R GL ++A +L MK
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL- 568
Query: 61 PDVNTYSILIKSCLK 75
PD TY+ LI++ L+
Sbjct: 569 PDSGTYNTLIRAHLR 583
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 150/324 (46%), Gaps = 5/324 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
++A +L M D+GC + ++ +++ + G D A +E +K+ P C+P+ +Y
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA---MEFLKSLPSYGCEPNTVSY 260
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++K A ++ + L+++MS +G PN VT+N LI R + L ++
Sbjct: 261 NIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK 320
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+ + N L AF ++D E S+G P I ++N LL + + G +
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDA 380
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ ++ + +++YN VID +AG ++ L M ++ ++P +T ++
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISS 440
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ E+ + + I +TV +N ++ + + + M GC P
Sbjct: 441 GLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMP 500
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
++ TY ++ + G+ A+E
Sbjct: 501 NESTYTILIEGLAYEGLVKEAREM 524
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 10/311 (3%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C+ + S+ A+++ Y +G D A L+ M +PD TY+ LI+ D
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM----EPDTYTYNTLIRGLCGRGRTDNA 171
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
A+L DM +G P+ VTY L++A + + + L +M + C PD+ T N +
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G++D + + S G +P+ ++NI+L A +E +M M +
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VT+N++I R G ++ + + P+ ++ ++ A+ K ++ + +
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTMVRAYS 319
+ +S D V +N L+ A R E+ +E++ Q +GC P ++Y T++ +
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCR---GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408
Query: 320 TNGMKNHAKEF 330
G A E
Sbjct: 409 KAGKTEEALEL 419
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ ++A + MV GC + S+ LL+A R G D A LL +K+ C P
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK-GCTPV 396
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I KA ++ LL++M T+G++P+ +TY+T+ R E
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC 456
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ P+ N L + + S G P+ +T+ IL++ G
Sbjct: 457 KVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEG 516
Query: 183 HFEKMSAVM-EYMQKYHYSWTIV 204
++ +M E + S T+V
Sbjct: 517 LVKEAREMMAELCSRGVVSKTLV 539
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 40/277 (14%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEM 117
C+PDV +Y+ ++ D + L++ M + P+T TYNTLI GR + +
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNAL 172
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ L ML C PDV T L A K ++ + G P I T+N++++
Sbjct: 173 AV-LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G + ++ + Y V+YNIV+ A + E L M + P+
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT FN L+ R +L+
Sbjct: 292 VVT-----------------------------------FNMLISFLCRRGLVEPAMEILD 316
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ + GC P+ ++Y ++ A+ + A F +L+
Sbjct: 317 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 3/208 (1%)
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CEPDV + N + + +GQ+D + ++P T+N L+ G +
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNAL 172
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
AV++ M + +VTY I+++A + KQ L MR + P VT +V
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G+ + L+ + + +TV +N ++ + + + + ++ M ++G P+
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
VT+ ++ G+ A E D + K
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPK 320
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFD---KAFSLLEHMKNTPD 58
L K + E+A EL MV +G + +++ + S R G + KAF ++ M
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM----G 462
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P+ Y+ ++ K A L + M + G PN TY LI+ + E
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+M++E C V + + N G I ++
Sbjct: 523 ----EMMAELCSRGVVS-----KTLVNKGAIRLLD 548
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 159/329 (48%), Gaps = 3/329 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M+ +G + +T ++ A++ + + DKAF LL + ++ C+PD+ TY+IL+
Sbjct: 227 AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL-SSRGCKPDIITYNILL 285
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
++ L + + + L+S+M + G +PN VT++ LI R E L M + +
Sbjct: 286 RTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLK 345
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD + + + F G++D + E S G P I +N ++ + G ++ V
Sbjct: 346 PDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGD-LKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E + + + +YN + A +GD + +E + +L+ ++ I P +T SL+
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL-NQGIDPDEITYNSLISCLC 464
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++ +L + + + V +N ++ ++ + VL M ++GC+P++
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
TY ++ +G++ A E + + M+
Sbjct: 525 TYILLIEGIGFSGLRAEAMELANSLHGMN 553
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 3/328 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A+ + M G + ++ ++ ++ G D A + E + +C+P V
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKD-NCEPTV 208
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI++ + D LL +M ++G+ P+T+TYN +I + M + L
Sbjct: 209 ITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRS 268
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S C+PD+ T N LR + G+ EK + S G +P++ T +IL+ + + G
Sbjct: 269 LSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGK 328
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+ ++ M++ Y+ +I F R G L M S+ P V +
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA-YGRLKCFAEMKGVLEVMQQR 302
++ GK ++ V +D + +N L A + + ++ +L+++ Q
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ- 447
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD++TY +++ +GM + A E
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIEL 475
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 150/330 (45%), Gaps = 13/330 (3%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
+ MVD+G + T L+ + S KA ++E ++ +PDV Y+ LI +
Sbjct: 92 LECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG--KPDVFAYNALISGFI 149
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDV 133
KA + +L M ++G P+ VTYN +I ++ R K+ +E+ ++L ++CEP V
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI-FEELLKDNCEPTV 208
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + A G ID K ++ S G++P T+N ++ K +K ++
Sbjct: 209 ITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRS 268
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ I+TYNI++ G + E L M S KP+ VT L+ GK
Sbjct: 269 LSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGK 328
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVT 310
E+ ++LR + + D ++ L+ + GRL E LE M GC PD V
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF---LEYMISDGCLPDIVN 385
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
Y T++ G + A E + EK+DE
Sbjct: 386 YNTIMAGLCRTGKADQALE---VFEKLDEV 412
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V+ +L +SC +A +++ L M +G P+ + LI + ++ + +
Sbjct: 69 EVHLMKLLNRSC-RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKAT-RV 126
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++L +PDV+ N + F + Q++ + ++ +S G P + T+NI++ S+
Sbjct: 127 MEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + E + K + T++TY I+I+A G + L M S+ ++P +T
Sbjct: 187 GKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTY 246
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++R +K +LR + + D + +N L+ ++E + ++ M
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
GCKP+ VT+ ++ +G +E +L+ M E L +PD
Sbjct: 307 IGCKPNVVTHSILIGTLCRDG---KVEEAVNLLRSMKEKGL---KPD 347
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ + ++A E+F+ + + GC N S+ L SA SG +A ++ + N
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-G 448
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD TY+ LI + D+ LL DM + RPN V+YN ++ + +
Sbjct: 449 IDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAI 508
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
L M + C+P+ T + G SG
Sbjct: 509 EVLAAMTEKGCQPNETTYILLIEGIGFSG 537
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ P+ TY
Sbjct: 129 KPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 184
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I K D+ + +M T+G ++P V YN LI Y L +M+
Sbjct: 185 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 244
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
V T N + A G+ + E+ G+ P + T+NIL++ + K G+ +
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + E M + T+VTY +I A + G +++ + LF I+P V +L+
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
++ +G ++ ++ ++ I D V +N L+ L E + +++ M +RG +
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424
Query: 306 PDKVTYRTMVRAYSTNG 322
PD VTY T++ YS G
Sbjct: 425 PDLVTYNTLISGYSMKG 441
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 145/338 (42%), Gaps = 10/338 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A ++ + M + G A Q ++ ++S + + G D+A + + M + +P+ Y+
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKM 124
LI D M +G+ TYN L+ A GR E+ + +M
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEM 278
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV+T N + G + + +E G++ ++ T+ L+ + K G
Sbjct: 279 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 338
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + + +V YN +I++ +G++ + + M +RI P VT +L
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+R G+ ++ ++ + I D V +N L+ Y + + M +G
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
P +TY +++ NG + A +++V++M E +
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDA---ENMVKEMVENGI 493
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
MV+ G ++ L+ A G +A+ L+E M PDV TY+ILI K
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFTYNILINGHCKEG 301
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
K + +MS +G+R VTY LI
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALI-------------------------------- 329
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
A GQ+ +K +++ GI+P + +N L++S+ +G+ ++ +M M+K
Sbjct: 330 ---YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ VTYN ++ G + + L M I+P VT +L+ Y G +
Sbjct: 387 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 446
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + N + +N L+ + + + +++ M + G PD TY +++
Sbjct: 447 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506
Query: 318 YST 320
+T
Sbjct: 507 LTT 509
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q ++ +LF V G + + AL++++ SG D+AF ++ M+ P
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAP 390
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ L++ D+ + L+ +M+ +GI+P+ VTYNTLI Y +
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 450
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+M+++ P + T N ++ +GQ D E ++ GI P +T+ L++
Sbjct: 451 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 21/344 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A +L M ++GC+ + S+T ++S+ + G ++A L + QP
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL------SIRFQP 247
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V+ Y+ LI + + +V LL M +GI PN +TY+T+I + +EL L
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSG---IGNVELAL 304
Query: 122 V---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
KM C P+V+T ++ + G++ + + G +P++ +N L+
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G + +V M++ S + TY +ID F +AGDL ++ M + P+
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGV 295
V S+V + + S++ + + +TV FN + GR++C +
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL--- 481
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M+Q GC P+ TY ++ +N KE +LV +M+E
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLK---ENRIKEALELVTEMEE 522
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++ M +EG + N ++ L+ G +A S+ M+ C P+V+TY L
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERN-GCSPNVSTYGAL 395
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I KA + + M T G PN V Y ++++ R+ MF++ + KM +++C
Sbjct: 396 IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T N ++ SG+++ + + + G P+I T+N +LD K ++
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M++ +VTYN + F G ++ L M +KP +T +L AY
Sbjct: 516 LVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575
Query: 250 HAGK 253
GK
Sbjct: 576 MQGK 579
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 120/324 (37%), Gaps = 36/324 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M GC N +FT+L+ Y G +A ++ M +P+V Y+
Sbjct: 301 ELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE-GFEPNVVAYNT 359
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ S M G PN TY LID + +A KM++
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V + S EK + P+ TFN + +G E
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M++Y S I TYN V+D L++ RIK +
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDG---------------LLKENRIKEAL---------- 514
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
++ ++ + L+ V +N + + + F E +L M G KPD
Sbjct: 515 ----------ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
+TY T+ AY G A + D
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLD 588
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 22/314 (7%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
T++ L S Y RS KAF Q TY I+I+ + D VQ LL
Sbjct: 55 TETDIVLASNYFRSIANSKAF------------QHTQLTYQIMIEKLGRECDVDGVQYLL 102
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGN 145
M +GI + + +I+ Y R + AE L + + E C+P V N L A +
Sbjct: 103 QQMKLEGISCSEDLFINVINTYRRVGL-AEQALKMFYRIREFGCQPTVKIYNHLLDAMLS 161
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ +E Y + G +P++ T+NILL + K + ++ M +V+
Sbjct: 162 ENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVS 221
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y VI + + G +++ L S R +P+ +L+ + K +++ +L +
Sbjct: 222 YTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMV 276
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
I + + ++ ++ + + V M RGC P+ T+ ++++ Y M+
Sbjct: 277 EKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF---MRG 333
Query: 326 HAKEFQDLVEKMDE 339
E ++ +M E
Sbjct: 334 RVLEALNIWNRMAE 347
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 36/257 (14%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTP----------- 57
A E++ M+ GC N +T++++ RS +F +A+SL+E M N P
Sbjct: 408 ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIK 467
Query: 58 ---------------------DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRP 96
C P++ TY+ ++ LK + L+++M +G+
Sbjct: 468 GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMEL 527
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N VTYNT+ + F E L KML +PD T N A+ G++ T +
Sbjct: 528 NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL 587
Query: 157 EKFQSAG-IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FG 214
+K + G P + + LL E+ ++ M T+N ++ F
Sbjct: 588 DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFN 647
Query: 215 RAGDLKQMEYLFRLMRS 231
G L + L ++ S
Sbjct: 648 SLGHLGPIHILDDILTS 664
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 146/341 (42%), Gaps = 6/341 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK A L ++MV + C N ++ ++ + + +AF+L M T
Sbjct: 262 MNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI-TKG 320
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD+ TY+ LI + + V LL++M I PN V ++T++DA + M A
Sbjct: 321 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 380
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ M+ EPDV T + ++D K ++ G P++ ++NIL++ Y
Sbjct: 381 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 440
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ +K ++E M VTYN +I G L+ LF M + P
Sbjct: 441 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 500
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ + +L+ I+ S++ D + +N +D R + +
Sbjct: 501 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 560
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ +G +PD TY M+ G+ + A + L KMDE
Sbjct: 561 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANK---LFRKMDE 598
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P ++ L+ S K + V +L + M + GI P+ T N LI+++ +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L K+L C+PD T N +R G+I ++K G QP + T+ L++ K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ M + + ++ YN +ID+ + + + LF M ++ I P T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ A + + + + ++L + NS IM + V F+ +VDA + A V+++M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 301 QRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
+RG +PD VTY ++ + M K F +V K
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 4/332 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + ++ GC + +F L+ G +A L + QPDV TY L+
Sbjct: 204 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG-EGFQPDVVTYGTLM 262
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K LL M + RPN + YNT+ID+ + + E +M+++
Sbjct: 263 NGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 322
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD++T N + A N + + + ++ I P++ F+ ++D+ K G V
Sbjct: 323 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 382
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M K +VTY ++D ++ + +F M + P+ + L+ Y
Sbjct: 383 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 442
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ +K +L + ++ DTV +N L+ + + M G PD VT
Sbjct: 443 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
YR ++ N +H E L++ ++ + L
Sbjct: 503 YRILLDYLCKN---HHLAEAMVLLKAIEGSNL 531
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C + E +A ++F MV +GC N +S+ L++ Y + DKA LLE M +
Sbjct: 402 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM-SLQG 460
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
D TY+ LI AL +M G P+ VTY L+D + AE
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 520
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ L + + + D+ N + +G+++ + S G+QP + T+NI++
Sbjct: 521 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 580
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
K G ++ + + M + S YN +I F R+ + L + M +E
Sbjct: 581 CKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAE 634
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 3/311 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS- 72
L MV+ N F+ ++ A + G+ A +++ M +PDV TY+ L+
Sbjct: 347 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGH 405
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
CL++ D+ + M +G PN +YN LI+ Y + + + L +M + D
Sbjct: 406 CLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + G++ + + ++G P + T+ ILLD K H + +++
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ + I+ YNI ID RAG+L+ LF + S+ ++P T ++ G
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 584
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++ + R +D + D +N ++ + R +L+ M G D T
Sbjct: 585 LLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTT 644
Query: 313 TMVRAYSTNGM 323
+V S +G+
Sbjct: 645 LIVEMLSDDGL 655
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 10 KAHELFQAMV------DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K H L +AMV DA+ + + R+G + A L ++ ++ QPDV
Sbjct: 512 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL-SSKGLQPDV 570
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLV 122
TY+I+I K D+ L M G + YNT+I + R+ + F +L L
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQL-LQ 629
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
+ML+E DV T + + G +++ +E+ + G+
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDG----LDQSFERLRLRGV 667
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ P+ TY
Sbjct: 498 KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 553
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I K D+ + +M T+G ++P V YN LI Y L +M+
Sbjct: 554 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 613
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
V T N + A G+ + E+ G+ P + T+NIL++ + K G+ +
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 673
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + E M + T+VTY +I A + G +++ + LF I+P V +L+
Sbjct: 674 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
++ +G ++ ++ ++ I D V +N L+ L E + +++ M +RG +
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793
Query: 306 PDKVTYRTMVRAYSTNG 322
PD VTY T++ YS G
Sbjct: 794 PDLVTYNTLISGYSMKG 810
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 144/335 (42%), Gaps = 10/335 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A ++ + M + G A Q ++ ++S + + G D+A + + M + +P+ Y+
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 590
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKM 124
LI D M +G+ TYN L+ A GR E+ + +M
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEM 647
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV+T N + G + + +E G++ ++ T+ L+ + K G
Sbjct: 648 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 707
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + + +V YN +I++ +G++ + + M +RI P VT +L
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+R G+ ++ ++ + I D V +N L+ Y + + M +G
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
P +TY +++ NG + A +++V++M E
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDA---ENMVKEMVE 859
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
MV+ G ++ L+ A G +A+ L+E M PDV TY+ILI K
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFTYNILINGHCKEG 670
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
K + +MS +G+R VTY LI
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALI-------------------------------- 698
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
A GQ+ +K +++ GI+P + +N L++S+ +G+ ++ +M M+K
Sbjct: 699 ---YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ VTYN ++ G + + L M I+P VT +L+ Y G +
Sbjct: 756 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 815
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + N + +N L+ + + + +++ M + G PD TY +++
Sbjct: 816 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875
Query: 318 YST 320
+T
Sbjct: 876 LTT 878
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q ++ +LF V G + + AL++++ SG D+AF ++ M+ P
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAP 759
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ L++ D+ + L+ +M+ +GI+P+ VTYNTLI Y +
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+M+++ P + T N ++ +GQ D E ++ GI P +T+ L++
Sbjct: 820 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 874
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 10/326 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K A L + M++ G + +F ++L + A ++ + C+P
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER-GCRP 541
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS LI K D+ LL+ M G R NTVTY+T++D + + + L
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL 601
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C PD T N + F ++ + AG PS+ T+ L ++
Sbjct: 602 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 661
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVT 240
G F++ +++YM + +TY+ ++D +AG + + + Y ++ R E + P +
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 721
Query: 241 LCSLVRAYGHAGKPEK----LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+L+ AG+ ++ L ++R D++ ++ N L DA GR+ E+
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA-GRIDTGLEL---F 777
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG 322
M +RGCK D Y M+ AY G
Sbjct: 778 CGMAERGCKADIYAYNAMINAYCLKG 803
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 6/332 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ AH +F+ ++ GC N +++ L+ + D+A LL M C+
Sbjct: 517 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCR 575
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ TYS ++ LK + +L M G P+ VTYNTLID + + + E
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 635
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML P V T SG+ D + + + G P+ T++ ++D K
Sbjct: 636 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695
Query: 181 AGHFEKMSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQM-EYLFRLMRSERIKPSC 238
AG + E M + + ++ Y+ +ID +AG + + E+L R++R+ RI P
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI-PDV 754
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT L+ AG+ + + + D +N +++AY F+ +LE
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ G + VT+ +++A N + A +
Sbjct: 815 MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSY 846
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 147/353 (41%), Gaps = 22/353 (6%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ ++A ELF M + GC A+ ++ LL + +A+ +E M+ T C P
Sbjct: 320 LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSP 379
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V T+S LI+ A ++ + M + +GI PN TY L++ +A +E
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439
Query: 121 LVKMLSED---------------------CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+ML + C P + T N + SG + E
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+G+ P + TFN +LD K V + + +VTY+ +ID + +
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ L M + + VT ++V G+ E VLR + ++ + D V +N L
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+D + + + E G+L M + G P VTY T+ +G + A E D
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 24/349 (6%)
Query: 3 GKCKQ---PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK PE + EGC N +F+ L+ +G ++A+ + E M
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDM---------------------STQGIRPNT 98
P+ TY+ L++ KA +++ M Q RP
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473
Query: 99 VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
VTYNTL+ ++ M + L M+ PDV T N L +I +++
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
G +P++ T++ L+D K ++ ++ M + VTY+ V+D + G
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ + R MR P VT +L+ + + + +LR + + V +
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
L R F E +L+ M RGC P+ +TY ++V G A
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 702
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 9/317 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ E K +L + M GC N ++ L++A G +AFSLLE M C
Sbjct: 45 GLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAAN-GCP 103
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ T+ ++IK K + ++ +M +G P+ + L+ A E
Sbjct: 104 PELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFF 163
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++L PD T N + +G+++ + + P++ TF I +D K
Sbjct: 164 FQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSK 223
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ + M + S VTY+ +ID +AG +++ L+R + +
Sbjct: 224 AGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAG---KLDIALGLLRDKNSQAGMFA 280
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ A +L ++ + + + V FN L++ + + E + +VM+
Sbjct: 281 FSSLLHGLCQA---HRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337
Query: 301 QRGCKPDKVTYRTMVRA 317
+ GC D +TY +++
Sbjct: 338 ESGCSADVITYNILLKG 354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 10/328 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A+E + M+ G + +F+ L++ +G D L M C+
Sbjct: 728 GLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER-GCK 786
Query: 61 PDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
D+ Y+ +I + CLK F ALL +M T GI NTVT+ +I A E +
Sbjct: 787 ADIYAYNAMINAYCLKG-EFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDE-AV 844
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + EDC ++ + N + + S + + + + G P + ++D
Sbjct: 845 SYFHSIPEDCRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG E + +++ M+ +S + TY I+I +A L F M + +KP +
Sbjct: 904 KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
SL+ A+ A K + +LR +S I ++ +VD+ + + + V+ M
Sbjct: 964 VYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + C+P + ++ AY G + A
Sbjct: 1021 KSKNCEPGIHIWTSLATAYVAEGRVDEA 1048
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 10/320 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ +A L + M++ G + ++T L RSG FD+A +L++M C P+
Sbjct: 625 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA-ARGCAPNA 683
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMST-QGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYS ++ KA + M+ + + P+ + Y+ LID +A E L
Sbjct: 684 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLE 743
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ PDV T + + ++G+IDT + + G + I +N ++++Y G
Sbjct: 744 RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKG 803
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC---V 239
F A++E M+ + + VT+ IVI A + + F I C +
Sbjct: 804 EFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF-----HSIPEDCRDEI 858
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +L+ + + + E+ +LR + D + ++D + +L+ M
Sbjct: 859 SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEM 918
Query: 300 QQRGCKPDKVTYRTMVRAYS 319
+ RG PD TY M+ S
Sbjct: 919 RSRGHSPDLRTYTIMISGLS 938
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 22/343 (6%)
Query: 10 KAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK------------NT 56
+A E+++ MV EG N ++ LL ++G + E M ++
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHS 458
Query: 57 PD--------CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
P+ C+P + TY+ L+ K+ LL M G+ P+ +T+N+++D
Sbjct: 459 PEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ + + + L C P+V T + + ++D + K G + +
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T++ ++D K G E V+ M+ VTYN +ID F + L++ L R
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M PS VT +L +G+ ++ +L ++ + + ++ +VD +
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 289 FAEMKGVLEVM-QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
E G E M + P + Y ++ G + A EF
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 162/405 (40%), Gaps = 71/405 (17%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEH---MKNTP 57
G CK+ E A + MVD G + + T LL A G D+A+ + + TP
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
D P V T++I + KA
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF 234
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G+ PNTVTY+ LID +A ++++ L + ++ + ++ + L
Sbjct: 235 DSMPQTGVSPNTVTYDALIDGLCKA---GKLDIALGLLRDKNSQAGMFAFSSLLHGLC-- 289
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
Q +E+ + ++ P++ FN L++ +A ++ + + M++ S ++TY
Sbjct: 290 -QAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348
Query: 207 NIVIDAFGRAGDLKQMEYLFRLM-RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RFI 264
NI++ + + + LM R+E P+ VT +L++ +AG+ + V R +
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 265 DNSDIMLDTVFFNCLVDAYGRL-------KCFAEM--------------KGVLEVMQQRG 303
I + + L++ + +CF +M ++ + +
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C+P VTY T+V S +GM ++ L+E M E+ L+ PD
Sbjct: 469 CRPTLVTYNTLVTGLSKSGM---VRDALGLLEFMIESGLS---PD 507
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K PE A +L Q M G + +++T ++S ++ A E M + +P
Sbjct: 902 LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK-NLKP 960
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D YS LI + KA DKV + + GI P Y+T++D+ + + + +
Sbjct: 961 DAIVYSSLIDAFCKA---DKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVI 1017
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+M S++CEP + A+ G++D K Q
Sbjct: 1018 REMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 94/260 (36%), Gaps = 37/260 (14%)
Query: 99 VTYNTLID-------------AYGRAKMFA-----------------EMEL-----TLVK 123
VTYN LI+ A+ +A F + E+ L +
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M C P+ T N + A G+ E+ + G P + TF +++ K G
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E V++ M + + + +++ A G + + + F+ + P VT +
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF-FNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+V AG+ E G VL+ + S TVF F VD + + M Q
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAES-FSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240
Query: 303 GCKPDKVTYRTMVRAYSTNG 322
G P+ VTY ++ G
Sbjct: 241 GVSPNTVTYDALIDGLCKAG 260
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTYN++I+ +AG + FR +P+ VT +++ + +K +L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 263 FIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + V +N LV+A GR K E +LE M GC P+ +T+ +++
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAK---EAFSLLERMAANGCPPELITFGLIIKGLC 117
Query: 320 TNG 322
G
Sbjct: 118 KEG 120
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 17/343 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +Q +A EL + M+ E C N ++ ++ + + GL K + M N C P
Sbjct: 54 LRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGIC-P 112
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V YS LI + + L +M +QGI+ N +TYN+LI A R ++ E T
Sbjct: 113 NVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTF 172
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ E PDV T + G++ K +E G P+I T+N LL+
Sbjct: 173 SQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLH 232
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ + E M + +++YN +I+ + +G ++ LFR M+ E + PS T
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDI-----MLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L++A G ++ + +N I LDT + L+D + C E V
Sbjct: 293 TILLKALYQNG---RIRTAKELFNNMQICGQSPSLDT--YTVLLDGLCKNGCIEEAIDVF 347
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
++ KP Y ++ G A+ ++ +E DE
Sbjct: 348 RSLKSIKYKPSIRIYSILI------GGMFQARRWESAMEIFDE 384
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 144/330 (43%), Gaps = 3/330 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A F MV EG + +FT L+ + G +A+ + E M + P++ TY+
Sbjct: 166 KEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEA-PNIVTYNS 224
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ D L M +GI+ + ++YNTLI+ Y + E KM E+
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P + T L+A +G+I T ++ + Q G PS++T+ +LLD K G E+
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V ++ Y +I Y+I+I +A + +F + + + P+ VT ++
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + + ++ S D + FN ++ + + + L+ M+++ P+
Sbjct: 405 CKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464
Query: 309 VTYRTMVRAYSTNGMKNHAKE--FQDLVEK 336
+V Y+ + + +LV+K
Sbjct: 465 SVTLMLVNLYAADAQSSELPNNFLHELVQK 494
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 148/356 (41%), Gaps = 36/356 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
K ++F+ M++ G N +++L++ R G +A +L + M + + +V TY+ L
Sbjct: 97 KGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV-SQGIKANVITYNSL 155
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + + + S M +GI P+ VT+ TLID + E M+ +
Sbjct: 156 IHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L Q+D + +E GI+ + ++N L++ Y +G E+
Sbjct: 216 APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMT 275
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL------------------------ 225
+ MQ + +I TY I++ A + G ++ + L
Sbjct: 276 LFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC 335
Query: 226 -----------FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
FR ++S + KPS L+ A + E + I ++ + V
Sbjct: 336 KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIV 395
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+N +++ + E + + M++ GC+ D++++ ++R + A EF
Sbjct: 396 TYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEF 451
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+P++ T++ ++ G++ + ++K +G Q I + L+++ K +
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M S TY +VID+ + G + +FR M + I P+ + SL+
Sbjct: 66 LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK + ++ + + I + + +N L+ A R + E M G PD V
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
T+ T++ S G A + +L+ K E
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 14/298 (4%)
Query: 7 QPEKAHELFQAMVDEG--CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
+ ++A EL Q M D+G C + S+T +++ + + G DKA+ M + P+V
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR-GILPNVV 235
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TYS +I + KA A DK +L+ M G+ PN TYN+++ Y + E L KM
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
S+ EPDV T N + +G+ K ++ G++P I T+ LL Y G
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+M +++ M + ++I+I A+ + G + Q +F MR + + P VT ++
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN------CLVDAYGR-----LKCFAE 291
+ +G+ E + + + + +N C+ D + + LKC+ E
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLKCWIE 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 37/325 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M GC N S+ LL +A LL+ M + DC PDV +Y+ +I
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K DK +M +GI PN VTY+++I A +A+ + L M+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T N + + +SGQ +K S G++P + T+N L+D K G + + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY ++ + G L +M L LM I P+ L+ AY G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ ML V M+Q+G PD VTY
Sbjct: 389 KVDQ------------AML-----------------------VFSKMRQQGLNPDTVTYG 413
Query: 313 TMVRAYSTNG-MKNHAKEFQDLVEK 336
T++ +G +++ + F+ ++++
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDE 438
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 8/334 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQPDVNTY 66
E A +F ++ G A+ L+ R A S M + P++ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI SC A D A L ++ +G R + + + L+ K ++ M++ L +M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG--IQPSINTFNILLDSYGKAGH 183
C P+V++ N L+ + + + + G P + ++ +++ + K G
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSCVTLC 242
+K M +VTY+ +I A +A + K ME L ++++ + P+C T
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG-VMPNCRTYN 273
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S+V Y +G+P++ L+ + + + D V +N L+D + E + + + M +R
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
G KP+ TY T+++ Y+T G DL+ +
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 154/305 (50%), Gaps = 9/305 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A S+ +H+ + +P + TY+IL+ + F+ + +LL+++ G+RP+++ +N L
Sbjct: 85 QAHSVFKHLMDEGH-KPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNAL 143
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG- 163
I+A+ AK E T KM C P T N ++ +G G+ + ++ ++ G
Sbjct: 144 INAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGS 203
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
++P++ T+NIL+ ++ + E+ V+ MQ + IVTYN + A+ + + E
Sbjct: 204 VRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAE 263
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
L +++ R++ S T ++ Y G+ E+ ++ + ++ + + V FN L+ +
Sbjct: 264 ELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGF 322
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
A + +L +M++ G KPD VTY + +S+ G H + + +KM E +
Sbjct: 323 LDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLG---HMAKCMHVFDKMIEAGI- 378
Query: 344 MKRPD 348
PD
Sbjct: 379 --EPD 381
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 4/346 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ K+ +A F M GC T +F L+ YG G +++ + + M +P++
Sbjct: 149 EAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNL 208
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+K+ ++ ++ M G P+ VTYNT+ AY E +V+
Sbjct: 209 TTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVE 268
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + T + + G+++ +C ++ + AG P++ FN LL + A
Sbjct: 269 IQTR-VRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAND 327
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M+K+ IVTY+ ++ F G + + ++F M I+P
Sbjct: 328 MAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSI 387
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + + A +PEK +L + + + + V F ++ + + V + M + G
Sbjct: 388 LAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSG 447
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P+ T+ T++ YS A+E +++ M ET + K+ +
Sbjct: 448 VYPNLRTFETLIWGYSEQKQPWKAEE---VLQMMRETGVKPKQSTY 490
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+RA +S + ++ G +PS+ T+ ILL + FE + +++ ++
Sbjct: 74 MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ +N +I+AF A + + F M+ P+ T +L++ YG GKPE+
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193
Query: 260 VLRFID-NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V + + + +N LV A+ + E GV+ MQ G +PD VTY T+ AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253
Query: 319 STNGMKNHAKEF 330
+ N A+E
Sbjct: 254 ANNDETWRAEEL 265
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 1/230 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ ++ Y R G ++A ++ MK+ P+V ++ L+K L A V +L
Sbjct: 278 RTWGIIIGGYCREGRLEEALRCVQQMKDAGSV-PNVVIFNTLLKGFLDANDMAAVNKILG 336
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M GI+P+ VTY+ ++ + A+ KM+ EPD + + F +
Sbjct: 337 LMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQ 396
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
Q + E + G+ P++ TF ++ + E V + M K + T+
Sbjct: 397 QPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFE 456
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+I + + E + ++MR +KP T C + A+ G E +
Sbjct: 457 TLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENI 506
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 2/275 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G + + ++ + SAY + +A L+ ++ + T+ I
Sbjct: 225 EEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR--VRTSERTWGI 282
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + ++ + M G PN V +NTL+ + A A + L M
Sbjct: 283 IIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMKKFG 342
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L F + G + ++K AGI+P ++IL + +A EK
Sbjct: 343 IKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAE 402
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M +VT+ VI + D++ ++ M + P+ T +L+ Y
Sbjct: 403 DLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGY 462
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + + + + + DA+
Sbjct: 463 SEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAW 497
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ P+ TY
Sbjct: 503 KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I K D+ + +M T+G ++P V YN LI Y L +M+
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
V T N + A G+ + E+ G+ P + T+NIL++ + K G+ +
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + E M + T+VTY +I A + G +++ + LF I+P V +L+
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
++ +G ++ ++ ++ I D V +N L+ L E + +++ M +RG +
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798
Query: 306 PDKVTYRTMVRAYSTNG 322
PD VTY T++ YS G
Sbjct: 799 PDLVTYNTLISGYSMKG 815
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 144/335 (42%), Gaps = 10/335 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A ++ + M + G A Q ++ ++S + + G D+A + + M + +P+ Y+
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 595
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKM 124
LI D M +G+ TYN L+ A GR E+ + +M
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEM 652
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ PDV+T N + G + + +E G++ ++ T+ L+ + K G
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
++ + + + +V YN +I++ +G++ + + M +RI P VT +L
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+R G+ ++ ++ + I D V +N L+ Y + + M +G
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
P +TY +++ NG + A +++V++M E
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDA---ENMVKEMVE 864
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
MV+ G ++ L+ A G +A+ L+E M PDV TY+ILI K
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFTYNILINGHCKEG 675
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
K + +MS +G+R VTY LI
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALI-------------------------------- 703
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
A GQ+ +K +++ GI+P + +N L++S+ +G+ ++ +M M+K
Sbjct: 704 ---YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ VTYN ++ G + + L M I+P VT +L+ Y G +
Sbjct: 761 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 820
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + N + +N L+ + + + +++ M + G PD TY +++
Sbjct: 821 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880
Query: 318 YST 320
+T
Sbjct: 881 LTT 883
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q ++ +LF V G + + AL++++ SG D+AF ++ M+ P
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAP 764
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ L++ D+ + L+ +M+ +GI+P+ VTYNTLI Y +
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+M+++ P + T N ++ +GQ D E ++ GI P +T+ L++
Sbjct: 825 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 879
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 143/310 (46%), Gaps = 1/310 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A F M +G AN ++ +L+ ++ G +D LL M T P+V T+S
Sbjct: 282 DDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI-TRKITPNVVTFSA 340
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S +K + + L ++M T+GI PNT+TYN+LI K E + M+S+
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+PD+WT N + F + Q+D + + K G+ T++ L+ + ++
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAK 460
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + M I+TY I++D G+L++ + M +++ ++
Sbjct: 461 KVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+A K + S+ + + + D +N ++ + +E + M++ G +PD
Sbjct: 521 CNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDG 580
Query: 309 VTYRTMVRAY 318
TY T++RA+
Sbjct: 581 CTYNTLIRAH 590
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 146/333 (43%), Gaps = 11/333 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A LFQ+M+ F L R+ +D +L + M+ D+ T
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQME-LKGIAYDLYTL 128
Query: 67 SILIKSCLK----AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG-RAKMFAEMELTL 121
+I+I + FAF + + G PNTVT+NTL++ ++F +EL
Sbjct: 129 NIMINCFCRRRKLGFAFSAMGKIFK----LGYEPNTVTFNTLLNGLCLEGRVFEAVELVD 184
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+LS+ PD+ T+N + ++ + + G QP+ T+ +L+ K+
Sbjct: 185 CMVLSQHV-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G+ ++ M+ +VTY I+ID + G L F M ++ IK + T
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL+ ++ G+ + +LR + I + V F+ L+D+ + E K + M
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
RG +P+ +TY +++ + + A + DL+
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M+ GC N ++ +L+ +SG A LL M++ +P V TY+I+
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK-IKPHVVTYTII 271
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + K D + S+M T+GI+ N TYN+LI ++ + + L M++
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI 331
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T + + + G++ + Y + + GI+P+ T+N L+ ++ +
Sbjct: 332 TPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+M+ M I TYNI+I+ F +A + LFR M + VT +L++ +
Sbjct: 392 MMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFC 451
Query: 250 HAGK 253
+ K
Sbjct: 452 QSRK 455
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 141/319 (44%), Gaps = 3/319 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + KQ + L + M +G + + +++ + R AFS + + +
Sbjct: 99 LLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKL-GYE 157
Query: 61 PDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+ T++ L+ CL+ F+ V+ + + +Q + P+ +T NT+++ +E
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV-PDLITLNTIVNGLCLKDRVSEAVD 216
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +M++ C+P+ +T L SG + K + I+P + T+ I++D+
Sbjct: 217 LIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLC 276
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+ + TYN +I +F G L R M + +I P+ V
Sbjct: 277 KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVV 336
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + GK + + + I +T+ +N L+ K E ++++M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396
Query: 300 QQRGCKPDKVTYRTMVRAY 318
+GC PD TY ++ +
Sbjct: 397 VSKGCDPDIWTYNILINGF 415
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ M+ G + NT ++ +L+ D+A +++ M + C PD+ TY+IL
Sbjct: 353 EAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV-SKGCDPDIWTYNIL 411
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I KA D L MS +G+ +TVTY+TLI + +++ + +M+S+
Sbjct: 412 INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471
Query: 130 EPDVWTMNCTLRAFGNSGQI-------DTMEKC--------------------------- 155
P + T L ++G++ D M KC
Sbjct: 472 HPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531
Query: 156 -YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ S G++ I ++NI+L K + A+ M++ Y TYN +I A
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHL 591
Query: 215 RAGDLKQMEYLFRLMR 230
R D+ L M+
Sbjct: 592 RGNDITTSVQLIEEMK 607
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++FQ MV +G ++ LL +G ++A +L+ M + D+ Y+I+I
Sbjct: 459 AKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK-MELDIGIYNIII 517
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
A D +L + ++G++ + +YN ++ + +E + KM + E
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYE 577
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PD T N +RA I T + E+ + G +T I++D +G +K
Sbjct: 578 PDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDK 632
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 2/218 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K KQ + LF+ M G A+T +++ L+ + +S A + + M + P +
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV-SQGVHPGI 475
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+IL+ ++ +L M + + YN +I A +
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S+ + D+ + N L + + + K + G +P T+N L+ ++ +
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
++E M++ +S T IV+D +G+L +
Sbjct: 596 ITTSVQLIEEMKRCGFSSDASTVKIVMDMLS-SGELDK 632
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 7/325 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+ E F + G N +F ++ Y F A L M +C PD TY+ ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTIL 250
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + LL DM ++G+ PN TYN L+ Y + E + M +
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDVWT N + N G+I+ K ++ ++ + P + ++N L++ + + +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M + VT+NI++ + + G + M P CVT +L+ Y
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 251 AGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AG +G R +D ++ +D+V N ++ R K E +L ++RG D
Sbjct: 431 AG---NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQD 332
+V+Y T++ Y +G + A + D
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWD 512
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 4/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A + + M + ++ L++ G ++AF L + M+N
Sbjct: 287 GYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLL 345
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +Y+ LI CL+ + LL +MS +G++PN VT+N ++ Y + + T
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ KM PD T N + + +G + + ++ ++ T N +L + +
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E+ ++ +K Y V+Y +I + + G++ + L+ M+ + I PS VT
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ GK E+ S L + S ++ D +N ++ Y R + M
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+ KPD T ++R G+ A K F V K
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSK 622
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 41/283 (14%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ +T I AY ++ KM P++ T N L + ++
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 156 YEKFQSA---GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E F A GI P++NTFNI++ Y F+ + M KY+ S VTYN ++D
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 213 F---GRAGD--------------------------------LKQMEYLFRLMRSERIKPS 237
GR GD LK+ + LM + P
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ + G+ E+ + ++N ++ D V +N L++ +E +LE
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M ++G KP+ VT+ MV+ Y G + A + + KM+E+
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDA---SNTITKMEES 412
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C + E+A +++ G + ++ +L Y R G +KAF M +P
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKP 591
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T +IL++ +K L + ++G +TVTYNTLI + + + L
Sbjct: 592 DVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+M ++ PD +T N + A +SG+I E+ K G P
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 54/370 (14%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E F+ M G + + +S+ LLSA SG +A +L M C PD+ TY++
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT----CSPDIMTYNV 213
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K + Q+L+ ++ G PN TY+ +I+ Y + E +KM+ +
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273
Query: 129 CEPDVWTMNCTLRAFGNSGQID-------TMEKC-------------------------- 155
C P+ T N + F +G ++ MEK
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 156 ---YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH--YSWTIVTYNIVI 210
+ K + AG+ P+I T+N L+ + A ++S M+Y + + ++TY+I+I
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDA---RRLSEAMQYFDEMEGKCAPNVITYSILI 390
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN---S 267
D + +K+ M++ P+ VT L+ + G +L S L F + +
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG---ELKSALLFFEKMKLA 447
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+TV FN L+D + + + +L M GCKPD +TY ++ + N
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCS---ANRV 504
Query: 328 KEFQDLVEKM 337
++ Q L + M
Sbjct: 505 EDAQRLFDGM 514
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 43/331 (12%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + E+A E+F M++ C N +F L++ + ++G+ + A L M+ C+ +
Sbjct: 255 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI-GCKATI 313
Query: 64 NTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ LI S C K L + + G+ P VTYN+LI + A+ +E
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSE------ 367
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME-KCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ F D ME KC P++ T++IL+D K
Sbjct: 368 ----------------AMQYF------DEMEGKC---------APNVITYSILIDGLCKV 396
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ + +E M+ + Y+ T+VTY +I+ F + G+LK F M+ P+ V
Sbjct: 397 RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIF 456
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ A + +L + D + +NCL+ + + + + M
Sbjct: 457 NTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM-- 514
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
C P+ T+ ++R A+ D
Sbjct: 515 -ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 138/314 (43%), Gaps = 8/314 (2%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ ++A LF+ ++ N ++ L+ + + G +A S+ MK++ P+ +T
Sbjct: 11 RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS-GLLPNAST 69
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ L+ + L +M P + ++N L+ + A + L M
Sbjct: 70 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMR 129
Query: 126 SEDCEPDVWTMNCTLRAF----GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
T N L+ ++ +++ + +++ +++G++P + +++ILL + +
Sbjct: 130 KSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDS 189
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + A+ M S I+TYN+++D + + G + + L + + +P+ T
Sbjct: 190 GRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTY 246
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ Y K E+ V + S+ + + V FN L+ + + + + M++
Sbjct: 247 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306
Query: 302 RGCKPDKVTYRTMV 315
GCK VTY T++
Sbjct: 307 IGCKATIVTYNTLI 320
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 7/254 (2%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + A D+ L ++ PN TYN LI + + + M S
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ TMN L GQ+ + K + + Q+ P+ + NILL + AG
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAF----GRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
A ++ M+K S TYN+V+ A L+Q F+ M++ ++P + L
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ A +G+ + ++ + S D + +N L+D Y ++ E + +++ + + G
Sbjct: 183 LSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239
Query: 305 KPDKVTYRTMVRAY 318
+P+ TY ++ Y
Sbjct: 240 EPNVFTYSIIINCY 253
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L ++ + D + +++ + P+ +T+N+L+ + K G + +V M+
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
T N ++ G + LFR M++ P+ + L+R + AG+
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAY-------GRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ L+ + S + T +N ++ RL+ E + M+ G +PD
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEF---FKEMKASGVEPDLE 177
Query: 310 TYRTMVRAYSTNG 322
+Y ++ A S +G
Sbjct: 178 SYHILLSALSDSG 190
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 2/328 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF M+ EG N ++ L++ + G A LL M+ +CQP+V +S L
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTL 216
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S K + + S+M T+GI PN VTYN+LI + + + + +M+
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV+T+N + A G + + G++P++ T+N L+D + +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V + M +++YN +I+ + + + + YLF M + + P+ VT +L+
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
H G+ + S+ + + D V + L D + + + +L+ ++ PD
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 310 TYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
Y T++ G A++ F +L K
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSK 484
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 143/348 (41%), Gaps = 7/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K K L + M G + + ++++ D AFS L + QP
Sbjct: 80 IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH-QP 138
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++ LI+ + L M +G +PN VTY TLI+ + + L
Sbjct: 139 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 198
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M +C+P+V + + + Q+ + + + GI P+I T+N L+ K
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ +M M + T N V+DA + G + + + +M ++P+ VT
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + V + + D + + + +N L++ Y +++ + + E M +
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ P+ VTY T++ H QD + E + PD
Sbjct: 379 QELTPNTVTYNTLIHGLC------HVGRLQDAISLFHEMVARGQIPDL 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+AH++ M+ G + N ++ AL+ + D A + + M + DC +V +Y+ L
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK-DCVANVISYNTL 356
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAK----MFAEM----- 117
I K + DK L +MS Q + PNTVTYNTLI GR + +F EM
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 118 --ELTLVKMLSE---------------------DCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+L + LS+ + +PD+ L +G+++
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ S G+QP++ T+NI++ K G + S + M K S TYN++ F
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Query: 215 RAGD-LKQMEYLFRLM-RSERIKPSCVTL 241
R + L+ +E L ++ R + S TL
Sbjct: 537 RNNEALRTIELLEEMLARGFSVDVSTTTL 565
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEM-----------------ELTLV---------------- 122
P+TV +N L+ + + K + + L +V
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 123 --KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K+L +PD T +R G+I ++K G QP++ T+ L++ K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ M++ + +V ++ +ID+ + + + +F M ++ I P+ VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ + + + +++ + +S IM D N +VDA + AE V+++M
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 301 QRGCKPDKVTYRTMVRAYST-NGMKNHAKEFQDLVEK 336
RG +P+ VTY ++ + N + K F +V K
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 1/214 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + +KA LF+ M + NT ++ L+ G A SL M PD+
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI-PDL 420
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY L K DK ALL + P+ Y T++D RA +
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S+ +P+VWT N + G + K + + G P+ T+N++ + +
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ ++E M +S + T +++ G
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%)
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
T +ML + P N L + + T+ + S GI P + T I+++S
Sbjct: 57 TFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 116
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ + + + K + T+ +I G + + +LF M E +P+ V
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G +LR ++ + + V F+ L+D+ + + E + M
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Query: 300 QQRGCKPDKVTYRTMVRA 317
+G P+ VTY +++
Sbjct: 237 ITKGISPNIVTYNSLIHG 254
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 163/344 (47%), Gaps = 11/344 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ ++L + MV +GC N ++ L+ +YGR+ +A ++ M+ C+
Sbjct: 395 ILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEM-GCE 453
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY LI KA D ++ M G+ P+T TY+ +I+ G++ +
Sbjct: 454 PDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRL 513
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P++ T N + + T K Y Q+AG +P T++I+++ G
Sbjct: 514 FCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGY 573
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIK--PS 237
G+ E+ AV M++ ++ Y ++ID +G+AG++ K E+ ++R+ + P+
Sbjct: 574 CGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPT 633
Query: 238 CVTLCS-LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
C +L S +R + L +++ N + T+ +C +A + +M
Sbjct: 634 CNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEA----QSPYDMGFCC 689
Query: 297 EVMQQRGCKPDKVTYRTMVRA-YSTNGMKNHAKEFQDLVEKMDE 339
E+M G P ++M A +++H +F DL+ D
Sbjct: 690 ELMAVSG-HPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDR 732
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
A S +K P D +TY+ ++ +A F + LL M G +PN VTYN LI
Sbjct: 369 ALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLI 428
Query: 106 DAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ 165
+YGRA E +M CEPD T + +G +D YE+ Q G+
Sbjct: 429 HSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLS 488
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P T++++++ GK+G+ + M IVTYNI+I +A + + L
Sbjct: 489 PDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKL 548
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+R M++ KP VT ++ G+ G E+ +V + ++ + D + L+D +G+
Sbjct: 549 YRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGK 608
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ M + G P+ T +++ A+
Sbjct: 609 AGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAF 641
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 3/289 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++T ++ GR+ F LLE M CQP+V TY+ LI S +A + + +
Sbjct: 387 HTYTTMVGILGRAREFGAINKLLEQMVKD-GCQPNVVTYNRLIHSYGRANYLGEALNVFN 445
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNS 146
M G P+ VTY TLID + +A F ++ +++ + + E PD +T + + G S
Sbjct: 446 QMQEMGCEPDRVTYCTLIDIHAKAG-FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + + + G P+I T+NIL+ KA +++ + MQ + VTY
Sbjct: 505 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTY 564
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+IV++ G G L++ E +F M+ P L+ +G AG EK +
Sbjct: 565 SIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLR 624
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ ++ + N L+ A+ R+ + +L+ M G P TY ++
Sbjct: 625 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 673
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TY T++ GRA+ F + L +M+ + C+P+V T N + ++G + + + +
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM 447
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
Q G +P T+ L+D + KAG + ++ E MQ+ S TY+++I+ G++G+L
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 507
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF M + P+ VT L+ A + + R + N+ D V ++ +
Sbjct: 508 SAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIV 567
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ G E + V M+Q PD+ Y ++ + G A E+
Sbjct: 568 MEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEW 618
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 207 NIVIDAFGRAGDLKQME-------YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
N IDA+ LKQ++ + + L R T ++V G A + +
Sbjct: 348 NFSIDAYQANQILKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINK 407
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+L + + V +N L+ +YGR E V MQ+ GC+PD+VTY T++ ++
Sbjct: 408 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHA 467
Query: 320 TNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G + A + E+M E L+ PD
Sbjct: 468 KAGFLDVA---MSMYERMQEVGLS---PD 490
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 9/306 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA----FAFDKVQA 84
S+T+L++AY R+ L ++A +LL+ MK T P TY+ ++ +C +A FD +
Sbjct: 198 SYTSLIAAYARNALHEEARALLDQMKAT-GVAPTAATYNTVLAACARATDPPVPFDMLLG 256
Query: 85 LLSDM---STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L ++M ++ +RP+ TYNTL+ A + + E+ L ML PD + +
Sbjct: 257 LFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD 316
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
AF ++G + + + + + G + + L++++ + G AV+ MQ +
Sbjct: 317 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 376
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T TY +++D +GR G + LFR MR+ + P T L R +G G +++ +
Sbjct: 377 TAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELF 435
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + D V ++ A G + + VLE M + G P Y +V A
Sbjct: 436 HDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHA 495
Query: 322 GMKNHA 327
M A
Sbjct: 496 AMYEEA 501
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ELF M G A+ ++ L+ A+ R G A ++L M+ C P TY +L
Sbjct: 326 RAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ-ADGCAPTAATYRVL 384
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + FD V+ L +M T + P+T TYN L +G F E+ ML
Sbjct: 385 LDLYGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGV 443
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD+ T + A G+ G + E G+ P+ + + L+++ G A +E+
Sbjct: 444 QPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYV 503
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTLCSLVRAY 248
M + T+ TYN + A+ R G ++ E +F R+ + I+ S + +L+ AY
Sbjct: 504 AFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAY 563
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + + S D +++AY E K E +Q P
Sbjct: 564 CQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSV 623
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ Y M+ Y+ N + + DL+E+M
Sbjct: 624 IAYCMMLSLYARN---DRWTDAYDLLEEM 649
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 51/348 (14%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI-----------LIKSCLKA 76
Q F A+ + R G + ++ L ++M+ C+PD + ++I L+ CL+
Sbjct: 126 QDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEV 185
Query: 77 FA------------------------FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
F ++ +ALL M G+ P TYNT++ A RA
Sbjct: 186 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 245
Query: 113 -----------MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+FAEM S PD+ T N L A D E
Sbjct: 246 DPPVPFDMLLGLFAEMR----HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLE 301
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
AG+ P ++ ++D++ AG+ + + + M ++ Y +++A R G
Sbjct: 302 AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATAD 361
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+ R M+++ P+ T L+ YG G+ + + + R + + + DT +N L
Sbjct: 362 AVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFR 420
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+G F E+ + M + G +PD VT ++ A G+ A+E
Sbjct: 421 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDARE 468
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 36/226 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG E+A+ F M + G +++ AL AY R GLF +A ++ M N
Sbjct: 492 LGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSN------ 545
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
GI+ + +++ LI+AY + +
Sbjct: 546 -----------------------------NAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 576
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++M PD ++ L A+ +G ID ++ +E+ QS+ PS+ + ++L Y +
Sbjct: 577 MEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARN 636
Query: 182 GHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLF 226
+ ++E M+ S T V +++ + + + + +EY+
Sbjct: 637 DRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVL 682
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 151/345 (43%), Gaps = 18/345 (5%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN----TPDC 59
K ++ +A+E+F+ M+ GC N ++TAL+ + ++G +KA + MKN PD
Sbjct: 204 KTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDV 263
Query: 60 ------------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
+P+V TY L+ KA + + LL MS +G PN + Y+ LID
Sbjct: 264 DIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323
Query: 108 YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS 167
+ + E + KML C P+V+T + + ++D K K P+
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPN 383
Query: 168 INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
+ + ++D K G ++ +M M++ +VTY +ID FG+AG + + L +
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
LM S+ P+ +T L+ AG + +L + + + +++ +
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE- 502
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
F G+L + + G P Y+ ++ + G A E +
Sbjct: 503 -FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHE 546
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 151/349 (43%), Gaps = 21/349 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA +LFQ M G + ++T LL + + GL ++A + + M+ C P+V TY+
Sbjct: 139 EKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD-GCAPNVVTYTA 197
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEMELTL 121
LI + LK + + M + G PN VTY LID + +A +++A M+
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257
Query: 122 VKMLSEDC----------EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
V + D EP+V T + + ++ E G +P+ +
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
+ L+D + K G ++ V M + S + TY+ +ID + L + M
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
P+ V +V GK ++ ++ ++ + V + ++D +G+
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+L++M +GC P+ +TYR ++ G+ + A L+E+M +T
Sbjct: 438 CLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDA---HKLLEEMKQT 483
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 18/343 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA+ + + M+ +G ++ +++ ++ + +KAF L + MK PDV TY+
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRN-GITPDVYTYTT 162
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K ++ + +M G PN VTY LI AY + + + MLS
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI-----------------QPSINTF 171
C P++ T + +G+ + + Y + ++ + +P++ T+
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
L+D KA ++ ++E M + Y+ +ID F + G L + + +F M
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
P+ T SL+ + + VL + + + V + +VD ++ E
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
++ +M+++GC P+ VTY M+ + G + E L+
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 144/335 (42%), Gaps = 24/335 (7%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+ EGC + F +L+ AY RSG + A+ LL+ M QP Y+ILI
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMV-ICGYQPGYVVYNILIGGICSTE 60
Query: 78 AFDKVQAL------LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
++ + ++M G+ N V F + + +M+S+ P
Sbjct: 61 DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
D T + + N+ +++ + +++ + GI P + T+ LLD + K G E+
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ MQ+ + +VTY +I A+ + L + +F +M S P+ VT +L+ + A
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240
Query: 252 GKPEKLGSV-----------------LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
G+ EK + R +D+ + V + LVD + E +
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+LE M GC+P+++ Y ++ + G + A+E
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 22/291 (7%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQA 84
N +FT L G+ F+KA++++ M + PD +TYS +I A +K
Sbjct: 88 VNVCNFTRCLCCIGK---FEKAYNVIREMM-SKGFIPDSSTYSKVIGYLCNASKVEKAFQ 143
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L +M GI P+ TY TL+D + + + + +M + C P+V T + A+
Sbjct: 144 LFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYL 203
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ ++ + +E S G P+I T+ L+D + KAG EK + M+
Sbjct: 204 KTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKN-------- 255
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
D+ ++ FR++ SE +P+ VT +LV A K ++ +L +
Sbjct: 256 ----------DKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + ++ L+D + ++ E + V M GC P+ TY +++
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +L + M EGC+ N + AL+ + + G D+A + M C P
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGH-GCSP 347
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS LI K D +L+ M PN V Y ++D + E +
Sbjct: 348 NVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM 407
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---SAGIQPSINTFNILLDSY 178
+ M + C P+V T + FG +G++D +C E Q S G P+ T+ +L++
Sbjct: 408 LMMEEKGCYPNVVTYTAMIDGFGKAGRVD---RCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
AG + ++E M++ ++ I Y VI+ F
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH 501
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A+ L M ++GC N ++TA++ +G++G D+ LL+ M + C
Sbjct: 393 GLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM-TSKGCA 451
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY +LI C A D LL +M + Y +I+ + + + L
Sbjct: 452 PNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVAS---LG 508
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L+ LSED G P + + +L+D++ K
Sbjct: 509 LLAELSED----------------------------------GSVPILPVYKLLIDNFIK 534
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG E + E + + ++ TY +I++ A + + L+ M P
Sbjct: 535 AGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSM 593
Query: 241 LCSLVRAYGHAGKPEK 256
L L++ GK E+
Sbjct: 594 LVCLIKGLLRVGKWEE 609
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 6/217 (2%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M++E C P N + A+ SG K +K G QP +NIL+
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 184 FEKMSAVMEYMQKYH--YSWTIVTYNIVIDAFGRA----GDLKQMEYLFRLMRSERIKPS 237
M + + Y+ +V + + F R G ++ + R M S+ P
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T ++ +A K EK + + + + I D + L+D + ++ + + +
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
MQQ GC P+ VTY ++ AY + A E +++
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMM 218
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 8/203 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++ EL Q M +GC N ++ L++ +GL D A LLE MK T
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTY-WPK 487
Query: 62 DVNTYSILIKSCLKAFAFDKVQA--LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+ Y + ++ F+ + V + LL+++S G P Y LID + +A EM L
Sbjct: 488 HIGMY----RKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRL-EMAL 542
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L + LS T + + + ++D K Y G P ++ L+
Sbjct: 543 ELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLL 602
Query: 180 KAGHFEKMSAVMEYMQKYHYSWT 202
+ G +E+ + + + + W
Sbjct: 603 RVGKWEEALQLSDSICQMDIHWV 625
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 14/302 (4%)
Query: 43 FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 102
+++A + E +K + +V Y+I+++ KA + V++L +M ++GI P TY
Sbjct: 176 WERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYG 235
Query: 103 TLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
TLID Y + + E L +M + EPD TM ++ + +G+ E+ ++ +
Sbjct: 236 TLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNW--- 292
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
+ L GK SAV E + H + TYN +ID +G+AG L++
Sbjct: 293 -------SLGKTLKDEGKTSEPTATSAV-ESASQPHVCLSSYTYNTLIDTYGKAGQLREA 344
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
F M E I P+ VT +++ G+ G+ E+ S+++ ++ DT +N L+
Sbjct: 345 SDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 404
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ + + M++ +PD V+YRT++ A+S +++ E + LV +MDE L
Sbjct: 405 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFS---IRHLVGEAEILVSEMDERGL 461
Query: 343 AM 344
+
Sbjct: 462 EI 463
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 163/405 (40%), Gaps = 70/405 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q +A + F M+ EG NT +F ++ G G ++A SL++ M+ C PD
Sbjct: 336 GKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEEL-RCPPD 394
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY+ILI K D+ + M + P+ V+Y TL+ A+ + E E+ +
Sbjct: 395 TRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVS 454
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ----------SAGIQP------ 166
+M E D +T + R + +G + + +F SA I
Sbjct: 455 EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGH 514
Query: 167 -----------------SINTFNILLDSYGKAGHFEKMSAVMEYMQ-------KYHYSWT 202
S+ FN+++ +YG + +EK +++ M+ K+ Y+
Sbjct: 515 ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSL 574
Query: 203 I----------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
I + Y VI +F + G L+ E LF+ M +
Sbjct: 575 IQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNV 634
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
+P V L+ A+ G + + + + N+ + ++ V +N L+ Y ++ E +
Sbjct: 635 QPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQE 694
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMD 338
+++Q PD + M+ YS M A+E F+ L K D
Sbjct: 695 AYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGD 739
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK ++ L+ M+ G ++ L+ Y + GL ++A L+ M N +
Sbjct: 205 ILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRM-NKQGME 263
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMS----------------TQGIRP-------- 96
PD T +++++ KA F K + + S T +
Sbjct: 264 PDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCL 323
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
++ TYNTLID YG+A E T ML E P+ T N + GN GQ++
Sbjct: 324 SSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLM 383
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+K + P T+NIL+ + K + ++ ++ + M++ +V+Y ++ AF
Sbjct: 384 QKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIR 443
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR-------------- 262
+ + E L M ++ T +L R Y AG +K R
Sbjct: 444 HLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYS 503
Query: 263 -----FIDNSDIM--------------LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+ + I+ L + FN ++ AYG + + +++ M+ G
Sbjct: 504 ANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHG 563
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
PDK +Y ++++ ++ + + AK + + KM ET L
Sbjct: 564 VLPDKFSYNSLIQILASADLPHKAKFY---LMKMQETQL 599
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 2/256 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L P KA M + ++ + A++S++ + G + A L + M + Q
Sbjct: 577 ILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGY-NVQ 635
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y ILI + + ++ + G+ N V YN+LI Y + E +
Sbjct: 636 PDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEA 695
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + + PDV++ NC + + + E+ +E + G +F ++L Y +
Sbjct: 696 YKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEF-SFAMMLCMYKR 754
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++ +++ M++ +++YN V+ + G K F+ M I+P T
Sbjct: 755 IGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCT 814
Query: 241 LCSLVRAYGHAGKPEK 256
SL G P++
Sbjct: 815 FKSLGVVLVKCGIPKQ 830
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 14/344 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ + A ++ M + GC NT ++ L++ RSG ++AF + M++ PD
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY-GLVPDG 292
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY LI K+ ++ +ALL +MS ++PN V Y LID + R E + +
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M++ +P+ T + +R GQ+D ++ +P T+N++++ GH
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE-----GH 407
Query: 184 FEKMSA-----VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
F S ++ M+ S + TY+I+I ++G+ ++ L M ++ +KP+
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ Y G + + +++ D +N L+ ++ E
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
MQ+RG P++ TY ++ Y NG A++ LV++M +T L
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQ---LVQRMLDTGL 568
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 36/349 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +A L M N + L+ + R G D+AF +++ M QP
Sbjct: 302 LCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQP 360
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY L++ K D+ LL M RP+T+TYN +I+ + R + L
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 420
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+V+T + + SG+ + E+ + G++P+ + L+ Y +
Sbjct: 421 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 480
Query: 182 GH-------FEKMSAVMEYMQKYHYSWTI----------------------------VTY 206
G+ F+KM+ V Y Y+ I TY
Sbjct: 481 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 540
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I + + GDL+ E L + M +KP+ V L+ +Y + EK+ S + + +
Sbjct: 541 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 600
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+MLD + L+ VL +++ G PD Y +++
Sbjct: 601 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 649
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK F++M+D+G + + + L+ SG + AF +L ++ PDV+ YS
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV-PDVHVYSS 647
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K +K +L +MS +G+ PN V YN LID ++ + +L++
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + G I Y + + GI P +++L AG E+
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 767
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M ++ +I ++N ++D F + G +++ L ++ + P+ +T+ +++
Sbjct: 768 FLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826
Query: 249 GHAGKPEKLGSV 260
AGK ++ ++
Sbjct: 827 SEAGKLSEVHTI 838
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 158/410 (38%), Gaps = 71/410 (17%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
G C+ +PEKA +L + M +G N + L+S Y R G A + + M P
Sbjct: 441 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500
Query: 58 DCQ-------------------------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D P+ TYS LI LK + + L+
Sbjct: 501 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 560
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G++PN V Y L+++Y ++ ++ T ML + D + +S
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G ++ + + G P ++ ++ L+ K EK +++ M K IV Y
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-------------- 252
N +ID ++GD+ +F + ++ + P+CVT SL+ G
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740
Query: 253 ---KPEK-LGSVLRF-------IDNSDIMLDTVF---------FNCLVDAYGRLKCFAEM 292
P+ + SVL ++ + +++ +F FN LVD + + E
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 800
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDETC 341
+L V+ RG P+ +T ++ S G + F +L +K E+
Sbjct: 801 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 850
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 105/237 (44%), Gaps = 3/237 (1%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+ + ++AY + + F + LV+M C + T N + SG ++ + +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
G+ P T+ L++ K+ + A+++ M +V Y +ID F R G+
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ + + M + ++P+ +T +LVR G+ ++ +L+ + DT+ +N ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ + R + +L M+ G P+ TY M+ +G A DL+E+M
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA---SDLLEEM 458
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 14/334 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A EL + M+ G AN +++AL+ + D+A +LL PD+ TYS
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA + +MS P +TYN+LI Y RA E L KM+ ++
Sbjct: 261 VIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T + AF G++D + +++ + + P + TF L+D G E
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E + + TI TYN V+D + ++ +++ E L RS P+ VT LV
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437
Query: 249 GHAGKPEKLGSVLRFID--NSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
AG+ ++ L+++D NS+ + ++DA R + E M QRG
Sbjct: 438 CRAGRTDQ---ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P T+ T+V A A E L+E+M
Sbjct: 495 YVPAAATFATVVFALCKAHQPQQAHE---LLEEM 525
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 140/314 (44%), Gaps = 5/314 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++T L+ ++G A +L+ M + PD T +++++S D + L+ +
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEE 209
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M +G+ N +TY+ L+D + + E + L L ++ PD+ T + + +G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++ +E+ A P+ T+N L+ Y +AG ++ ++ M + + ++TY
Sbjct: 270 RLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ AF + G L LF+ M + ++ P VT SLV G+ E +L I
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+NC+VD Y + + + ++ + RG P+ VTY +V G + A
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446
Query: 328 KEFQDLVEKMDETC 341
++ D + C
Sbjct: 447 LQYLDQLNSEGGPC 460
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 111/273 (40%), Gaps = 6/273 (2%)
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY LI KA D+ LL DM ++G+ P T+ +N +I RA L + +
Sbjct: 81 TTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRL-RHALGVYR 139
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+++ PD T + +G++ + ++ SA P T +++ S
Sbjct: 140 QMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDR 199
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLC 242
+ ++E M + +TY+ ++D + L + L + R P VT
Sbjct: 200 VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYS 259
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ AG +L + + + +N L+ Y R E +L M
Sbjct: 260 TVIDGLCKAG---RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 316
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
C PD +TY T++ A+ G + A E FQ +V
Sbjct: 317 NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV 349
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK 54
L K QP++AHEL + M+ G + A++SAY R+G+ KA L ++
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 19/333 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
++A +L M D+GC + ++ +++ + G D A +E +KN P C+P+ +Y
Sbjct: 84 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSY 140
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++K A ++ + L+ +M +G PN VT+N LI R + L ++
Sbjct: 141 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+ + N L AF ++D + S G P I ++N LL + ++G +
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ ++ + +++YN VID +AG K+ L M S+ ++P +T ++
Sbjct: 261 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVM 299
+ E + + I +TV +N ++ + + + FA M G
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG----- 375
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
GC P++ TY ++ + G+ A++ D
Sbjct: 376 --NGCMPNESTYTILIEGLAYEGLIKEARDLLD 406
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 10/305 (3%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ A+++ Y +G D A L+ M +PD TY+ LI+ A+L +
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M + P+ VTY L++A + + + L +M + C PD+ T N + G+
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+D + + S G +P+ ++NI+L A +E +M M + +VT+N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I R G ++ + + P+ ++ L+ A+ K +K + L + +
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTMVRAYSTNGMKN 325
D V +N L+ A R E+ +E++ Q +GC P ++Y T++ + G
Sbjct: 238 CYPDIVSYNTLLTALCR---SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294
Query: 326 HAKEF 330
A E
Sbjct: 295 EALEL 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ +KA MV GC + S+ LL+A RSG D A LL +K+ C P
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK-GCAPV 276
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I KA + LL++M ++G++P+ +TY+T+ R +
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED------ 330
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+RAFG K Q GI+P+ +N ++ K
Sbjct: 331 ----------------AIRAFG-------------KVQDMGIRPNTVLYNAIILGLCKRR 361
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+ YM TY I+I+ G +K+ L
Sbjct: 362 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 37/344 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---PDCQ------ 60
+A + F M+D G N +T L++ + ++G +A S+ H+ PD Q
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531
Query: 61 -------------------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
PDV TYS LI K +K L +M +GI
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 591
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN YN L+D ++ M + EPD T + + + S +
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + S G+QP +N L+ K G EK M+ E +QK T +++N +ID +
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF--ATTLSFNTLIDGYC 709
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++ +++ LF+ M +++I P VT +++ + AGK E+ + + + ++++DTV
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ L+ Y +L +E+ + E M +G KPD+VTY ++ A+
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 146/352 (41%), Gaps = 36/352 (10%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TP 57
G CK + EKA E+ + M+ GC N+++F L+ Y R +A LL+ M+ P
Sbjct: 288 GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 347
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+P+V YS LI ++ + LL
Sbjct: 348 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
MS G+ P+ YN +I +A E L+++ +PD T + + +
Sbjct: 408 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 467
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ K +++ G+ P+ + +L++ + KAG+ + ++ ++ + T
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ I + G +++ +F ++ + + P T SL+ + G+ EK + +
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I + +N LVD + + + + M ++G +PD VTY TM+ Y
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 6/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K+ +A F+ M G + + +AL+ + R G D+ + + M + C
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS---CGI 275
Query: 62 DVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+N TY++LI K +K +L M T G +PN+ T+ LI+ Y R
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + P + + + + K EK +G++P++ ++ L+ Y
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G E+ +++ M + I YN +I +AG +++ ++ +KP V
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + + Y GK + + + +M + + L++ + + E + +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G PD T + NG A K F +L EK
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 152/354 (42%), Gaps = 37/354 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F + ++G + ++++L+S + + G +KAF L + M P++ Y+
Sbjct: 541 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM-CLKGIAPNIFIYNA 599
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K+ + + L M +G+ P++VTY+T+ID Y +++ AE +M S+
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P + N + G ++ + + G ++ +FN L+D Y K+ ++ S
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEAS 718
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M VTY VID +AG +++ LF+ M+ + VT SL+ Y
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFF-------------------------------- 276
G+ ++ ++ + + D V +
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838
Query: 277 ---NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ L+ A + + E +L+ M + G KP T+VR++ G + A
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 137/342 (40%), Gaps = 54/342 (15%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F L+ +Y R G+ D+A ++ KN SILI S ++ + L M
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKND----------SILI-SLIRCNS-------LRSM 200
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G+ PNT TY + RAK E +LT +M +PD + + F G I
Sbjct: 201 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 260
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV------------------- 190
D + + + S GI ++ T+N+L+ K G EK + +
Sbjct: 261 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 320
Query: 191 ----------------MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
++ M+K + + V+Y +I+ DL L M +
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP+ V +L+ Y G+ E+ +L + S + D +N ++ + E
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVE 335
L +Q RG KPD VT+ + YS G M AK F ++++
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 482
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 158/404 (39%), Gaps = 74/404 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L CK A++L + M G N ++ L+ Y G ++A LL+ M + P
Sbjct: 359 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAP 417
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMF 114
D+ Y+ +I KA ++ L ++ +G++P+ VT+ I Y + AK F
Sbjct: 418 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 477
Query: 115 AEM---------------------------ELTLVKMLSE-DCEPDVWTMNCTLRAFGNS 146
EM L++ + L PDV T + + +
Sbjct: 478 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 537
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ K + + + G+ P + T++ L+ + K G EK + + M + I Y
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-----------PE 255
N ++D ++GD+++ LF M + ++P VT +++ Y + P
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 256 KLGSVLRFIDNSDI------------------MLD-----TVFFNCLVDAYGRLKCFAEM 292
K F+ N+ + ML T+ FN L+D Y + E
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEA 717
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA----KEFQD 332
+ + M + PD VTY T++ + G A KE Q+
Sbjct: 718 SQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 39/317 (12%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A +LF M ++G + ++ +++ ++ Y +S +AFSL M + Q
Sbjct: 603 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP-SKGVQ 661
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y+ L+ C K +K L +M +G T+++NTLID Y ++ E
Sbjct: 662 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQL 720
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+++ PD T + +G+++ +++ Q + T+ L+ Y K
Sbjct: 721 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 780
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVI------------------------------ 210
G ++ A+ E M VTY +VI
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840
Query: 211 -----DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
A + DL + L M +KPS +LVR++ AGK ++ V +
Sbjct: 841 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900
Query: 266 NSDIMLDTVFFNCLVDA 282
+ ++ DT LV+
Sbjct: 901 SLGLVPDTTTLIDLVNG 917
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAV------------------MEYMQKYHYSWTI 203
G P + F+IL+DSY + G ++ + V + M +
Sbjct: 152 GGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNT 209
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
TY I+ RA + + + F M+ +KP +L+ + G +++ +
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269
Query: 264 IDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + I ++ + +N L+ +G+++ AE +L+ M GCKP+ T+ ++ Y
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAE---ILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 321 NGMKNHAKEFQDLVEK 336
A E D +EK
Sbjct: 327 EHNMGRALELLDEMEK 342
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 7/325 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
+ E F + G N +F ++ Y F A L M +C PD TY+ ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTIL 250
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + LL DM ++G+ PN TYN L+ Y + E + M +
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDVWT N + N G+I+ K ++ ++ + P + ++N L++ + + +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+E M + VT+NI++ + + G + M P CVT +L+ Y
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 251 AGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
AG +G R +D ++ +D+V N ++ R K E +L ++RG D
Sbjct: 431 AG---NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQD 332
+V+Y T++ Y +G + A + D
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWD 512
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 4/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A + + M + ++ L++ G ++AF L + M+N
Sbjct: 287 GYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLL 345
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +Y+ LI CL+ + LL +MS +G++PN VT+N ++ Y + + T
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ KM PD T N + + +G + + ++ ++ T N +L + +
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E+ ++ +K Y V+Y +I + + G++ + L+ M+ + I PS VT
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ GK E+ S L + S ++ D +N ++ Y R + M
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+ KPD T ++R GM A K F V K
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSK 622
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 41/283 (14%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
P+ +T I AY ++ KM P++ T N L + ++
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 156 YEKFQSA---GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E F A GI P++NTFNI++ Y F+ + M KY+ S VTYN ++DA
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 213 F---GRAGD--------------------------------LKQMEYLFRLMRSERIKPS 237
GR GD LK+ + LM + P
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T L+ + G+ E+ + ++N ++ D V +N L++ +E +LE
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M ++G KP+ VT+ MV+ Y G + A + + KM+E+
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDA---SNTITKMEES 412
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ + A M + G + ++ L++ Y ++G +AF ++ M + + D
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMD 452
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
T + ++++ + ++ LLS +G + V+Y TLI Y +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M ++ P T NC + G+ + + +G+ P T+N +L Y + G
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG 572
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
EK M + + + T NI++ G L++ LF S+ VT
Sbjct: 573 DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYN 632
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVM 299
+L+ + G+ + ++L ++ ++ D +N ++ A GR++ E + + M
Sbjct: 633 TLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIR---EAEEFMSKM 689
Query: 300 QQRGCKPDKV 309
++G P +V
Sbjct: 690 LEKGXLPXQV 699
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C + E+A +++ G + ++ +L Y R G +KAF M +P
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKP 591
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T +IL++ +K L + ++G +TVTYNTLI + + + L
Sbjct: 592 DVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+M ++ PD +T N + A +SG+I E+ K G P
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 2/328 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF M+ EG N ++ L++ + G A LL M+ +CQP+V +S L
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTL 216
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S K + + S+M T+GI PN VTYN+LI + + + + +M+
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV+T+N + A G + + G++P++ T+N L+D + +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V + M +++YN +I+ + + + + YLF M + + P+ VT +L+
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
H G+ + S+ + + D V + L D + + + +L+ ++ PD
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 310 TYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
Y T++ G A++ F +L K
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSK 484
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 143/348 (41%), Gaps = 7/348 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K K L + M G + + ++++ D AFS L + QP
Sbjct: 80 IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH-QP 138
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D T++ LI+ + L M +G +PN VTY TLI+ + + L
Sbjct: 139 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 198
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M +C+P+V + + + Q+ + + + GI P+I T+N L+ K
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ +M M + T N V+DA + G + + + +M ++P+ VT
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + + + V + + D + + + +N L++ Y +++ + + E M +
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
+ P+ VTY T++ H QD + E + PD
Sbjct: 379 QELTPNTVTYNTLIHGLC------HVGRLQDAISLFHEMVARGQIPDL 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+AH++ M+ G + N ++ AL+ + D A + + M + DC +V +Y+ L
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK-DCVANVISYNTL 356
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAK----MFAEM----- 117
I K + DK L +MS Q + PNTVTYNTLI GR + +F EM
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 118 --ELTLVKMLSE---------------------DCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+L + LS+ + +PD+ L +G+++
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ S G+QP++ T+NI++ K G + S + M K S TYN++ F
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Query: 215 RAGD-LKQMEYLFRLM-RSERIKPSCVTL 241
R + L+ +E L ++ R + S TL
Sbjct: 537 RNNEALRTIELLEEMLARGFSVDVSTTTL 565
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 96 PNTVTYNTLIDAYGRAKMFAEM-----------------ELTLV---------------- 122
P+TV +N L+ + + K + + L +V
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 123 --KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
K+L +PD T +R G+I ++K G QP++ T+ L++ K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ ++ M++ + +V ++ +ID+ + + + +F M ++ I P+ VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ + + + +++ + +S IM D N +VDA + AE V+++M
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 301 QRGCKPDKVTYRTMVRAYST-NGMKNHAKEFQDLVEK 336
RG +P+ VTY ++ + N + K F +V K
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 1/214 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + +KA LF+ M + NT ++ L+ G A SL M PD+
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI-PDL 420
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY L K DK ALL + P+ Y T++D RA +
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S+ +P+VWT N + G + K + + G P+ T+N++ + +
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ ++E M +S + T +++ G
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV G + ++ L ++ DKA +LL+ ++ + + PD+ Y+
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS-NWDPDIQIYTT 460
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ +A + + L S++S++G++PN TYN +I + + AE +M
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ T N R F + + + E+ + G ++T +L+ G + +
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 580
Query: 189 AVM-EYMQ 195
++ +Y+Q
Sbjct: 581 QILCKYVQ 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%)
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
T +ML + P N L + + T+ + S GI P + T I+++S
Sbjct: 57 TFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 116
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ + + + K + T+ +I G + + +LF M E +P+ V
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G +LR ++ + + V F+ L+D+ + + E + M
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Query: 300 QQRGCKPDKVTYRTMVRA 317
+G P+ VTY +++
Sbjct: 237 ITKGISPNIVTYNSLIHG 254
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 14/344 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ + A ++ M + GC NT ++ L++ RSG ++AF + M++ PD
Sbjct: 256 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY-GLVPDG 314
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY LI K+ ++ +ALL +MS ++PN V Y LID + R E + +
Sbjct: 315 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 374
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M++ +P+ T + +R GQ+D ++ +P T+N++++ GH
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE-----GH 429
Query: 184 FEKMSA-----VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
F S ++ M+ S + TY+I+I ++G+ ++ L M ++ +KP+
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ Y G + + +++ D +N L+ ++ E
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
MQ+RG P++ TY ++ Y NG A++ LV++M +T L
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQ---LVQRMLDTGL 590
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 5/330 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P + +A+ D G + L+ Y +SG A ++ M++ P + +
Sbjct: 156 PVVLASIHRALSDSG-HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDR-GMAPSIRCCN 213
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+K L+A A + + M GI P+ TY+TLI+AY + + F + LV+M
Sbjct: 214 ALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRER 273
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C + T N + SG ++ + + G+ P T+ L++ K+ +
Sbjct: 274 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 333
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A+++ M +V Y +ID F R G+ + + + M + ++P+ +T +LVR
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G+ ++ +L+ + DT+ +N +++ + R + +L M+ G P+
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY M+ +G A DL+E+M
Sbjct: 454 VYTYSIMIHGLCQSGEPEKA---SDLLEEM 480
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 36/349 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +A L M N + L+ + R G D+AF +++ M QP
Sbjct: 324 LCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQP 382
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY L++ K D+ LL M RP+T+TYN +I+ + R + L
Sbjct: 383 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 442
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+V+T + + SG+ + E+ + G++P+ + L+ Y +
Sbjct: 443 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 502
Query: 182 GH-------FEKMSAVMEYMQKYHYSWTI----------------------------VTY 206
G+ F+KM+ V Y Y+ I TY
Sbjct: 503 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 562
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I + + GDL+ E L + M +KP+ V L+ +Y + EK+ S + + +
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+MLD + L+ VL +++ G PD Y +++
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 671
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK F++M+D+G + + + L+ SG + AF +L ++ PDV+ YS
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV-PDVHVYSS 669
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K +K +L +MS +G+ PN V YN LID ++ + +L++
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + G I Y + + GI P +++L AG E+
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M ++ +I ++N ++D F + G +++ L ++ + P+ +T+ +++
Sbjct: 790 FLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848
Query: 249 GHAGKPEKLGSV 260
AGK ++ ++
Sbjct: 849 SEAGKLSEVHTI 860
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 158/409 (38%), Gaps = 71/409 (17%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
G C+ +PEKA +L + M +G N + L+S Y R G A + + M P
Sbjct: 463 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522
Query: 58 DCQ-------------------------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D P+ TYS LI LK + + L+
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 582
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G++PN V Y L+++Y ++ ++ T ML + D + +S
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G ++ + + G P ++ ++ L+ K EK +++ M K IV Y
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-------------- 252
N +ID ++GD+ +F + ++ + P+CVT SL+ G
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762
Query: 253 ---KPEK-LGSVLRF-------IDNSDIMLDTVF---------FNCLVDAYGRLKCFAEM 292
P+ + SVL ++ + +++ +F FN LVD + + E
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 822
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDET 340
+L V+ RG P+ +T ++ S G + F +L +K E+
Sbjct: 823 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 871
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA +L M +EG ++ A++ +SG + A M+ QPDV TY+
Sbjct: 325 KKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAM-GLQPDVITYNS 383
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ KA + + L D+ G+ P +TYN LID Y R E +M+ +
Sbjct: 384 LLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PDV T ++ N+ + + +++ S G+QP +N + + G K
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E M S VTYNI+ID + G+L + L M ++P C+T L+ A+
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + + V + + AY R G M + G +P++
Sbjct: 564 CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 623
Query: 309 VTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+TY ++ A G A + F +++E+
Sbjct: 624 ITYNVLIHALCRTGRTQLAYRHFHEMLER 652
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 9/317 (2%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC N + +++ R G ++A ++E M+ + + TY+ LI L K
Sbjct: 269 GCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK--KASSFTYNPLITGLLAKGFVKK 326
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L +M +GI P VTYN +I ++ ++ V+M + +PDV T N L
Sbjct: 327 ADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLN 386
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+ +G + + + AG+ P++ T+NIL+D Y + G E+ + E M +
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA---YGHAGKPEKLG 258
+ TY I++ A L F M S+ ++P C + +RA G K +L
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLR 506
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
V+ I DTV +N L+D + + K + M G +PD +TY ++ A+
Sbjct: 507 EVMML---EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563
Query: 319 STNGMKNHAKE-FQDLV 334
G+ A++ F+D++
Sbjct: 564 CERGLLREARKFFKDMI 580
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEM 117
PDV + +++ A +D + A+ ++M GI P+ VTYNTL+D++ GR A M
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVA-M 258
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L ++ C P+ T N + G ++ + E + + S T+N L+
Sbjct: 259 LLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF-TYNPLITG 317
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G +K + M+ T+VTYN +I ++G ++ + F MR+ ++P
Sbjct: 318 LLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
+T SL+ Y AG ++ + + ++ + + +N L+D Y RL E + + E
Sbjct: 378 VITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKE 437
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD--LVEKMDETCLA 343
M ++GC PD TY +++ A+EF D L + + C A
Sbjct: 438 EMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 142/334 (42%), Gaps = 12/334 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A LF + G ++ L+ Y R G ++A L E M C
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQ-GCL 445
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY----GRAKMFAE 116
PDV TY+IL+K A + + +M ++G++P+ YNT I A AK F
Sbjct: 446 PDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRL 505
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
E+ M+ E D T N + +G ++ + K G+QP T+ L+
Sbjct: 506 REV----MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIH 561
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
++ + G + + M + + VTY + I A+ R G+L FR M E ++P
Sbjct: 562 AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEP 621
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ +T L+ A G+ + + ++ + + L+D + + +
Sbjct: 622 NEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFY 681
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M Q G PD +T++ + + + G NHA E+
Sbjct: 682 FEMHQNGIHPDYLTHKALFKGFD-EGHMNHAIEY 714
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M S PDV N LR ++ + D + + + GI+PSI T+N LLDS+ K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251
Query: 183 HFEKMSAVMEYMQKYHYSW--TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+K++ +++ M+ VT+N+VI R GDL++ + MR + K S T
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFT 310
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ G +K + ++N IM V +N ++ +G L+ ++ ++
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMI--HGLLQSGQVEAAQVKFVE 368
Query: 301 QR--GCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
R G +PD +TY +++ Y G +K F DL
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL 404
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA L + M+ EG ++T ++ L+ ++G + A L M + QPD TY+ L
Sbjct: 501 KAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN-GLQPDCITYTCL 559
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + + + + DM + G+ P+ VTY I AY R KML E
Sbjct: 560 IHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGV 619
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
EP+ T N + A +G+ + + + G+ P+ T+ +L+D K G++E
Sbjct: 620 EPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMR 679
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
M + +T+ + F +EYL
Sbjct: 680 FYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIEYL 715
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+ F+ M++EG + N ++ L+ A R+G A+ M P+ TY++LI
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLER-GLVPNKYTYTLLI 665
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
K ++ +M GI P+ +T+ L + M +E +L E
Sbjct: 666 DGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIEYLENAVLGE 722
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 19/333 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
++A +L M D+GC + ++ +++ + G D A +E +KN P C+P+ +Y
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSY 65
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++K A ++ + L+ +M +G PN VT+N LI R + L ++
Sbjct: 66 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 125
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+ + N L AF ++D + S G P I ++N LL + ++G +
Sbjct: 126 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 185
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ ++ + +++YN VID +AG K+ L M S+ ++P +T ++
Sbjct: 186 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 245
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMKGVLEVM 299
+ E + + I +TV +N ++ + + + FA M G
Sbjct: 246 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG----- 300
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
GC P++ TY ++ + G+ A++ D
Sbjct: 301 --NGCMPNESTYTILIEGLAYEGLIKEARDLLD 331
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ +KA MV GC + S+ LL+A RSG D A LL +K+ C P
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK-GCAPV 201
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I KA + LL++M ++G++P+ +TY+T+ R +
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED------ 255
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+RAFG K Q GI+P+ +N ++ K
Sbjct: 256 ----------------AIRAFG-------------KVQDMGIRPNTVLYNAIILGLCKRR 286
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
+ YM TY I+I+ G +K+ L
Sbjct: 287 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 330
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P+KA +LF M + GC + SF +L +S +KA+ L ++ D TY
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTY 198
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ K +L +M +GI PN TYNT++ + RA ++M
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
DCE DV T + FG +G+I +++ G+ PS+ T+N ++ K + E
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ E M + Y + TYN++I AG+ + E L + M +E +P+ T ++R
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
Y + EK + + + D + + +N L+
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 3 GKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C K+ KA E+ + MV+ G + N ++ +L + R+G A+ MK DC+
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-DCE 262
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ ++ A + + + +M +G+ P+ TYN +I + +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ EP+V T N +R ++G+ E+ ++ ++ G +P+ T+N+++ Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
EK + E M + TYNI+I
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 2/294 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ SF + R L +SL+ M++ P T++I+ + A DK L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSL-RIGPSPKTFAIVAERYASAGKPDKAVKL 148
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M G + ++NT++D ++K E L + L D T N L +
Sbjct: 149 FLNMHEHGCFQDLASFNTILDVLCKSKR-VEKAYELFRALRGRFSVDTVTYNVILNGWCL 207
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + ++ GI P++ T+N +L + +AG M+K +VT
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y V+ FG AG++K+ +F M E + PS T ++++ E + +
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ +N L+ F+ + +++ M+ GC+P+ TY M+R YS
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 96/238 (40%), Gaps = 2/238 (0%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+++ ID R + + + +M S P T + ++G+ D K +
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
G + +FN +LD K+ EK + ++ +S VTYN++++ +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRT 211
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + + M I P+ T ++++ + AG+ + D +D V + +
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
V +G + V + M + G P TY M++ + ++N F+++V +
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
T+ + +S I PS TF I+ + Y AG +K + M ++ + ++N ++
Sbjct: 109 TVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL 168
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
D ++ +++ LFR +R RF
Sbjct: 169 DVLCKSKRVEKAYELFRALRG------------------------------RF------S 192
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+DTV +N +++ + +K + VL+ M +RG P+ TY TM++ + G HA EF
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 331 QDLVEKMD 338
++K D
Sbjct: 253 FLEMKKRD 260
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 9/306 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA----FAFDKVQA 84
S+T+L++AY R+ L ++A +LL+ MK T P TY+ ++ +C +A FD +
Sbjct: 176 SYTSLIAAYARNALHEEARALLDQMKAT-GVAPTAATYNTVLAACARATDPPVPFDMLLG 234
Query: 85 LLSDM---STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L ++M ++ +RP+ TYNTL+ A + + E+ L ML PD + +
Sbjct: 235 LFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD 294
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
AF ++G + + + + + G + + L++++ + G AV+ MQ +
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T TY +++D +GR G + LFR MR+ + P T L R +G G +++ +
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELF 413
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + D V ++ A G + + VLE M + G P Y +V A
Sbjct: 414 HDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHA 473
Query: 322 GMKNHA 327
M A
Sbjct: 474 AMYEEA 479
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ELF M G A+ ++ L+ A+ R G A ++L M+ C P TY +L
Sbjct: 304 RAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ-ADGCAPTAATYRVL 362
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + FD V+ L +M T + P+T TYN L +G F E+ ML
Sbjct: 363 LDLYGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGV 421
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD+ T + A G+ G + E G+ P+ + + L+++ G A +E+
Sbjct: 422 QPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYV 481
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTLCSLVRAY 248
M + T+ TYN + A+ R G ++ E +F R+ + I+ S + +L+ AY
Sbjct: 482 AFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAY 541
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + + S D +++AY E K E +Q P
Sbjct: 542 CQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSV 601
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ Y M+ Y+ N + + DL+E+M
Sbjct: 602 IAYCMMLSLYARN---DRWTDAYDLLEEM 627
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 51/348 (14%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI-----------LIKSCLKA 76
Q F A+ + R G + ++ L ++M+ C+PD + ++I L+ CL+
Sbjct: 104 QDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEV 163
Query: 77 FA------------------------FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
F ++ +ALL M G+ P TYNT++ A RA
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 113 -----------MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+FAEM S PD+ T N L A D E
Sbjct: 224 DPPVPFDMLLGLFAEMR----HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLE 279
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
AG+ P ++ ++D++ AG+ + + + M ++ Y +++A R G
Sbjct: 280 AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATAD 339
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+ R M+++ P+ T L+ YG G+ + + + R + + + DT +N L
Sbjct: 340 AVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFR 398
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+G F E+ + M + G +PD VT ++ A G+ A+E
Sbjct: 399 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDARE 446
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 36/226 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG E+A+ F M + G +++ AL AY R GLF +A ++ M N
Sbjct: 470 LGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSN------ 523
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
GI+ + +++ LI+AY + +
Sbjct: 524 -----------------------------NAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++M PD ++ L A+ +G ID ++ +E+ QS+ PS+ + ++L Y +
Sbjct: 555 MEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARN 614
Query: 182 GHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLF 226
+ ++E M+ S T V +++ + + + + +EY+
Sbjct: 615 DRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVL 660
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +ELF AM ++GC +T ++ A++ + +SG +KA+ LLE MK P
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK-VKGHPP 402
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY +I K D+ L + + GI+ N V Y++LID +G+ E L +
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 462
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++ + P+V+T NC L A + +I+ C++ + P+ T++IL++ +
Sbjct: 463 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 522
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F K + MQK +TY +I +AG++ + LF ++ P +
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASY 582
Query: 242 CSLVRAYGHAGK 253
+++ A K
Sbjct: 583 NAMIEGLSSANK 594
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ- 60
L K ++ E+A +F+ M D+ C N +F++L+ G+ G D A+SL E M DC
Sbjct: 204 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML---DCGH 260
Query: 61 -PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P Y+ LI+S K + + +M G P+ NT +D +A +
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ + PD + + + +G + + + + G + +N ++D +
Sbjct: 321 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G K ++E M+ + T+VTY VID + L + LF +S IK + V
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 440
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
SL+ +G G+ ++ ++ + + + +NCL+DA + + E + M
Sbjct: 441 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 500
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ C P+++TY ++
Sbjct: 501 KDLKCPPNQITYSILING 518
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 1/317 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC + E H++++ MV GC + + ++G +K +L + N PD
Sbjct: 276 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHGFIPDA 334
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YSILI +KA ++ L M QG +T YN +ID + ++ + L +
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + P V T + ++D +E+ +S GI+ ++ ++ L+D +GK G
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ +ME + + + + T+N ++DA +A ++ + F+ M+ + P+ +T
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ K K + + + +T+ + ++ + E G+ + G
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574
Query: 304 CKPDKVTYRTMVRAYST 320
PD +Y M+ S+
Sbjct: 575 GIPDSASYNAMIEGLSS 591
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + ++A+ L + +G + ++ +L+ G+ ++A + E MK D P+
Sbjct: 101 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPN 158
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ILI + + + DM G+ PN +T N +ID +A+ E
Sbjct: 159 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 218
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C P+ T + + G G++D YEK G P + L+ S+ K G
Sbjct: 219 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 278
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + + M S + N +D +AG+ ++ LFR + + P +
Sbjct: 279 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 338
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AG + + + +LDT +N ++D + + + +LE M+ +
Sbjct: 339 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 398
Query: 303 GCKPDKVTYRTMV 315
G P VTY +++
Sbjct: 399 GHPPTVVTYGSVI 411
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 138/333 (41%), Gaps = 32/333 (9%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC----------LKAFAFDKVQALLSD 88
+S +AF +++ M+ +P + Y+ILI KA D+ L
Sbjct: 22 KSRKLREAFDIIQTMRKF-KFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQ 80
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ P YNT+I YG A F E L + ++ P V NC L G +
Sbjct: 81 LEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRR 140
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
++ + +E+ + + P++ T+NIL+D + G + + M++ ++T NI
Sbjct: 141 VEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 199
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID +A L++ +F M + P+ VT SL+ G G+ + S+ + +
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKG--VLEVMQQRGCKPDKV---TY------------ 311
+ + + L+ ++ KC + G + + M GC PD TY
Sbjct: 260 HVPGAIVYTSLIRSF--FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 317
Query: 312 -RTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
R + R + +G A+ + L+ + + LA
Sbjct: 318 GRALFREINAHGFIPDARSYSILIHGLVKAGLA 350
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 14/286 (4%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P N L+ +C+K+ + ++ M RP Y LI G +F + L
Sbjct: 8 PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV-LC 66
Query: 121 LVKMLSEDCE-----------PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN 169
L E E P + N + +G++G+ D E+ ++ G PS+
Sbjct: 67 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126
Query: 170 TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+N +L GK E+ + E M++ + TYNI+ID R G L + M
Sbjct: 127 AYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDM 185
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+ P+ +T+ ++ A K E+ S+ +D+ + V F+ L+D G+
Sbjct: 186 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 245
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
+ + E M G P + Y +++R++ G K K ++++V
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 291
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 11/185 (5%)
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG------- 214
+G PS N L+ + K+ + +++ M+K+ + Y I+I G
Sbjct: 4 SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPW 63
Query: 215 ---RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+A L + LF + R P +++ YG AGK ++ +L +
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ +NC++ G+ + E + E M +R P+ TY ++ G N A E +
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 332 DLVEK 336
D +E+
Sbjct: 183 DDMER 187
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 12/353 (3%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C E H L F+ M C N +++T L+ +SG ++A L M +
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLE 279
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI+ LL M T G+ PN T++ LIDA + + E +L
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ + + + + +G+ID ++ +K S G P ++++ L+D +
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + ++E M + + VTY I+ID R + + +F M + I P VT
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
VR+Y G+ E S++ + + + + V +N L+ Y L ++ EVM
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA---------KEFQDLVEKMDETCLAM 344
+G KP++ +Y ++R +++ K+ Q L+E + E L +
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPL 572
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 151/368 (41%), Gaps = 44/368 (11%)
Query: 1 MLGKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ H +F M GC ++TALL +G+ +A ++ M+
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMR-ADS 172
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PD + Y+ ++ +A ++ + LL + + G PN V YN LID Y A EME
Sbjct: 173 CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEME 229
Query: 119 LTLVKMLSED---CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L D C P+V T + SG+++ + + AG++P++ T+ L+
Sbjct: 230 HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
GH + ++ M+ T++++IDA + +++ + + + +K
Sbjct: 290 QGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ V SL+ GK + +++ + + + D ++ L+D R K ++ +
Sbjct: 350 VNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLM 409
Query: 296 LEVMQQRGCK-----------------------------------PDKVTYRTMVRAYST 320
LE M ++G + PD VTY VR+Y
Sbjct: 410 LEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 321 NGMKNHAK 328
G A+
Sbjct: 470 EGRMEDAE 477
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 16/349 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E+A ++V +G N +T+L+ ++G D A L++ M + P
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI-SEGFVP 385
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D ++YS LI + + +L DM +GI+ + VTY +ID R +
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM++ PD+ T +R++ G+++ E + G+ P++ T+N L+ Y
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 182 GHFEKMSAVMEYMQKYHY-----SWTIVTYNIV--------IDAFGRAGDLKQMEYLFRL 228
G + + E M + S+T++ +V +D + + D+K ++ L
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW-KIADMKDLQVLLED 564
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
+ ++ + +R + E+ + N+++ + ++D RLK
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+ +L+ M + G P +YR ++ + G AKE F DL+ K
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLK 673
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 143/362 (39%), Gaps = 50/362 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A LF MV+ G + N ++TAL+ G AF LL H+ T
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HLMETNGLV 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T+S+LI + K ++ Q L + +G++ N V Y +LID + +
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQI--------DTMEK------------------ 154
+ KM+SE PD + + + ++ D MEK
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Query: 155 ---------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
++K + GI P I T+ + + SY + G E +++ M +VT
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I + G + Q F +M + KP+ + L+R + + + D
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554
Query: 266 NSD--IMLDTV----------FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
D ++L+ + ++C + R+ E K MQ P + Y +
Sbjct: 555 MKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614
Query: 314 MV 315
++
Sbjct: 615 II 616
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 4/312 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++T L++AY +G A L + + PD Y+ + +A +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVLGYCRAGMLTHACRV 129
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M +G TY L+ A M E V M ++ C PD +
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+ + E E+ S G +P+I +N L+D Y AG E V E M S + T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y +I ++G +++ LF M ++P+ VT +L++ + G + +L ++
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + F+ L+DA + + E + L + ++G K ++V Y +++ G +
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 326 HAKEFQDLVEKM 337
A E L++KM
Sbjct: 370 AADE---LMQKM 378
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 133/327 (40%), Gaps = 2/327 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +++ G ++ ++T+ + Y R+G+ A + M C TY+ L+
Sbjct: 91 AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTYTALL 149
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
L A + A+ M P+T Y T++ A E E+ L + +S E
Sbjct: 150 HGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ N + + N+G+++ K +E P++ T+ L+ K+G E+ +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + +VTY +I G L+ L LM + + P+ T L+ A
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K E+ L + + ++ V + L+D + +++ M G PD +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 311 YRTMVRAYSTNGMKNHAK-EFQDLVEK 336
Y +++ + A +D++EK
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 46/307 (14%)
Query: 50 LEHMKNTPDCQ-PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
L H +P P + + L+ + + F +++L S M + +R TY TLI+AY
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAY 82
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
A + L +L PD + + + +G + + + G +
Sbjct: 83 CLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTA 142
Query: 169 NTFNILLDSYGKAGHFEKMSAVM-------------EYMQKYH----------------- 198
T+ LL AG + AV Y H
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202
Query: 199 -----YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ IV YN +ID + AG+++ +F M R P+ T L+ +GK
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK 262
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVT 310
E+ + + + + + V + L+ G L+C + L +M+ G P+ T
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL---LHLMETNGLVPNDWT 319
Query: 311 YRTMVRA 317
+ ++ A
Sbjct: 320 FSVLIDA 326
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +ELF AM ++GC +T ++ A++ + +SG +KA+ LLE MK P
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK-VKGHPP 647
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY +I K D+ L + + GI+ N V Y++LID +G+ E L +
Sbjct: 648 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 707
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++ + P+V+T NC L A + +I+ C++ + P+ T++IL++ +
Sbjct: 708 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 767
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F K + MQK +TY +I +AG++ + LF ++ P +
Sbjct: 768 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASY 827
Query: 242 CSLVRAYGHAGK 253
+++ A K
Sbjct: 828 NAMIEGLSSANK 839
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 5/335 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++P+ LF M + G + N FT L+ + R G D A SLL+ MK+
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN-SLDA 263
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y++ I KA D +M + G+ P+ VTY ++I +A E + L
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEA-VEL 322
Query: 122 VKMLSEDCE-PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ L ++ + P + N + +G++G+ D E+ ++ G PS+ +N +L GK
Sbjct: 323 FEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGK 382
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E+ + E M++ + TYNI+ID R G L + M + P+ +T
Sbjct: 383 KRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLT 441
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ ++ A K E+ S+ +D+ + V F+ L+D G+ + + E M
Sbjct: 442 VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 501
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLV 334
G P + Y +++R++ G K K ++++V
Sbjct: 502 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ- 60
L K ++ E+A +F+ M D+ C N +F++L+ G+ G D A+SL E M DC
Sbjct: 449 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML---DCGH 505
Query: 61 -PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P Y+ LI+S K + + +M G P+ NT +D +A +
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 565
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
++ + PD + + + +G + + + + G + +N ++D +
Sbjct: 566 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 625
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K+G K ++E M+ + T+VTY VID + L + LF +S IK + V
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
SL+ +G G+ ++ ++ + + + +NCL+DA + + E + M
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ C P+++TY ++
Sbjct: 746 KDLKCPPNQITYSILING 763
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 1/317 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC + E H++++ MV GC + + ++G +K +L + N PD
Sbjct: 521 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHGFIPDA 579
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YSILI +KA ++ L M QG +T YN +ID + ++ + L +
Sbjct: 580 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + P V T + ++D +E+ +S GI+ ++ ++ L+D +GK G
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ +ME + + + + T+N ++DA +A ++ + F+ M+ + P+ +T
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ K K + + + +T+ + ++ + E G+ + G
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819
Query: 304 CKPDKVTYRTMVRAYST 320
PD +Y M+ S+
Sbjct: 820 GIPDSASYNAMIEGLSS 836
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + ++A+ L + +G + ++ +L+ G+ ++A + E MK D P+
Sbjct: 346 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPN 403
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ILI + + + DM G+ PN +T N +ID +A+ E
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C P+ T + + G G++D YEK G P + L+ S+ K G
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + + M S + N +D +AG+ ++ LFR + + P +
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 583
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AG + + + +LDT +N ++D + + + +LE M+ +
Sbjct: 584 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 643
Query: 303 GCKPDKVTYRTMV 315
G P VTY +++
Sbjct: 644 GHPPTVVTYGSVI 656
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 2/309 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ +LL R+ FD +LE M + P N L+ +C+K+ + ++
Sbjct: 126 EAYNSLLMVMARNTEFDHLERILEEM-SLSGFGPSSNISIELVANCVKSRKLREAFDIIQ 184
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M RP Y LI A + M + +M E +V +R F G
Sbjct: 185 TMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREG 244
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D ++ +S + I +N+ +D +GKAG + M+ + VTY
Sbjct: 245 RVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYT 304
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+I +A L + LF + R P +++ YG AGK ++ +L
Sbjct: 305 SMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 364
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + +NC++ G+ + E + E M +R P+ TY ++ G N A
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAA 423
Query: 328 KEFQDLVEK 336
E +D +E+
Sbjct: 424 LEIRDDMER 432
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P+KA +LF M + GC + SF +L +S +KA+ L ++ D TY
Sbjct: 135 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTY 192
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ K +L +M +GI PN TYNT++ + RA ++M
Sbjct: 193 NVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 252
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
DCE DV T + FG +G+I +++ G+ PS+ T+N ++ K + E
Sbjct: 253 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 312
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ E M + Y + TYN++I AG+ + E L + M +E +P+ T ++R
Sbjct: 313 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 372
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
Y + EK + + + D + + +N L+
Sbjct: 373 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 408
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ K E+ + MV+ G + N ++ +L + R+G A+ MK DC+ DV T
Sbjct: 203 KRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVT 261
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ A + + + +M +G+ P+ TYN +I + + +M+
Sbjct: 262 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 321
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EP+V T N +R ++G+ E+ ++ ++ G +P+ T+N+++ Y + E
Sbjct: 322 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 381
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + E M + TYNI+I
Sbjct: 382 KALGLFEKMGSGDCLPNLDTYNILISG 408
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 2/294 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ SF + R L +SL+ M++ P T++I+ + A DK L
Sbjct: 84 DASSFDLAIDIAARLHLHPTVWSLIHRMRSL-RIGPSPKTFAIVAERYASAGKPDKAVKL 142
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M G + ++NT++D ++K E L + L D T N L +
Sbjct: 143 FLNMHEHGCFQDLASFNTILDVLCKSKR-VEKAYELFRALRGRFSVDTVTYNVILNGWCL 201
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + ++ GI P++ T+N +L + +AG M+K +VT
Sbjct: 202 IKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 261
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y V+ FG AG++K+ +F M E + PS T ++++ E + +
Sbjct: 262 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 321
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ +N L+ F+ + +++ M+ GC+P+ TY M+R YS
Sbjct: 322 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 375
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 96/238 (40%), Gaps = 2/238 (0%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
+++ ID R + + + +M S P T + ++G+ D K +
Sbjct: 87 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 146
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
G + +FN +LD K+ EK + ++ +S VTYN++++ +
Sbjct: 147 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRT 205
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ + + M I P+ T ++++ + AG+ + D +D V + +
Sbjct: 206 PKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 265
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
V +G + V + M + G P TY M++ + ++N F+++V +
Sbjct: 266 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
T+ + +S I PS TF I+ + Y AG +K + M ++ + ++N ++
Sbjct: 103 TVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL 162
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
D ++ +++ LFR +R RF
Sbjct: 163 DVLCKSKRVEKAYELFRALRG------------------------------RF------S 186
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+DTV +N +++ + +K + VL+ M +RG P+ TY TM++ + G HA EF
Sbjct: 187 VDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 246
Query: 331 QDLVEKMD 338
++K D
Sbjct: 247 FLEMKKRD 254
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 155/345 (44%), Gaps = 6/345 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +A E+F+ M E C + ++ L+++ +G F KA L + MK +P
Sbjct: 20 LAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEP 79
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ LI + + + LLS+M + I N TY+++I + + E L
Sbjct: 80 DRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVL 139
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M++ C PDV+ N ++ F S ++ + Y+ +G +P +++IL+ K
Sbjct: 140 EEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKI 199
Query: 182 GHFEKMSAVME--YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G ++ ++ M+ Y ++T++ +I R G+L++ +F M KP+
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 259
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ A K + + + + I D V +N L+ Y + E + + M
Sbjct: 260 TYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319
Query: 300 Q-QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
G +P VT+ T++ + G A E LV +M LA
Sbjct: 320 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANE---LVAEMGTKGLA 361
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 2/296 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK-NTPDCQPDVNTYS 67
EKA E++Q MV+ G + S+ L+ + G D++ +L M P+V T+S
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI + +K + M G +PN TY TLI RA+ + KM
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFEK 186
PD N + + G +D EK Y + AG+QP+I TFN L+D + K G +
Sbjct: 288 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ ++ M + TY I+I RA L + +++ MR ++ V+ S V
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 407
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
G ++ +V S + + F L ++ +L + + ++E + R
Sbjct: 408 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+++ +G + + +E +S PS+ T+N+L++S AG F K + + M++
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 199 Y----SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
W TYN +I +G+ + L MR + I + T S++++ KP
Sbjct: 76 RVEPDRW---TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
E+ VL + + D FN ++ + R + + V + M + G KPD V+Y +
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 315 VRAYSTNG 322
+ + G
Sbjct: 193 IHGLAKIG 200
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 47/284 (16%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV-------------------------- 133
Y+ ++ + +A M A+ M SE C P +
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 134 ----------WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
WT N + +SG + K + + I ++ T++ ++ S K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+ V+E M + + +N V+ F R+ ++++ +++ M KP V+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 244 LVRAYGHAGKPEKLGSVLR--FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV--- 298
L+ GK ++ +L + + + + + F+ L+ R E++ LEV
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRT---GELEKALEVFGS 248
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
M + GCKP+K TY T++ A+E L EKM + C+
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARE---LFEKMTQACI 289
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++ ++ S KAG + V E M+ ++VTYN++I++ AG+ + LF+
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70
Query: 229 MRSE-RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
M+ E R++P T +L+ +G E +L + + +I + ++ ++ + +
Sbjct: 71 MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS-TNGMKNHAKEFQDLVE 335
E VLE M GC PD + +++ ++ +N M+ + +Q +VE
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE 179
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 153/359 (42%), Gaps = 42/359 (11%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ +A L MV +GC + ++ +++ + G D AF LL M+ +P V Y
Sbjct: 201 KASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGK-LEPGVLIY 259
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA---YGRAKMFAEMELTLVK 123
+ +I K D L +M T+GIRPN VTY++LI YGR +++ L
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLSD 316
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV+T + + AF G++ EK Y++ I PSI T++ L++ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 184 FEKMSAVMEYMQKYH-------YSWTI----------------------------VTYNI 208
++ + E+M H YS I VTY
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I +AGD + +F+ M S+ + P+ +T +L+ GK EK V ++ S
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +N +++ + + + + +G KPD V Y TM+ + G K A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 150/329 (45%), Gaps = 1/329 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K + A LF+ M +G N ++++L+S G + A LL M P
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+S LI + +K + + L +M + I P+ VTY++LI+ + E +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+S+ C PDV + + ++ F + ++D + + + G+ + T+ L+ +A
Sbjct: 385 EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQA 444
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + + M I+TYN ++D + G L++ +F ++ +++P+ T
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ AGK E + + + D V +N ++ + R E + + M++
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G P+ Y T++RA +G + + E
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAEL 593
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L+ MV D + ++++L++ + D+A + E M + C PDV +YS L
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVSYSTL 402
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
IK KA D+ L +MS +G+ NTVTY TLI +A + +M+S+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L +G+++ +E Q + ++P+I T+NI+++ KAG E
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + +V YN +I F R G ++ + LF+ M+ + P+ +L+RA
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 250 HAGKPEKLGSVLR 262
G E +++
Sbjct: 583 RDGDREASAELIK 595
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF MV + F+ LLSA + FD SL E M+N + TYSI
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GMPHNHYTYSI 121
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + A+L M G PN VT ++L++ Y +K +E + +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ T N + + ++ + G QP + T+ ++++ K G +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M++ ++ Y +ID + + LF+ M ++ I+P+ VT SL+
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I D F+ L+DA+ + E + + + M +R P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
VTY +++ + + + AK+ F+ +V K
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 149/325 (45%), Gaps = 2/325 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + M+ G + N + ++LL+ Y S +A +L++ M T QP+ T++ LI
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT-GYQPNTVTFNTLI 193
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ AL+ M +G +P+ VTY +++ + + L KM E
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V + + +D +++ ++ GI+P++ T++ L+ G + S +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + + + T++ +IDAF + G L + E L+ M I PS VT SL+ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ ++ + F+ + D V ++ L+ + + K E + M QRG + VT
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 311 YRTMVRAYSTNGMKNHAKE-FQDLV 334
Y T+++ G + A+E F+++V
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMV 458
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+F+ MV +G N ++ LL ++G +KA + E+++ + +P + TY+I+I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMI 508
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ KA + L ++S +G++P+ V YNT+I + R E + +M +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
P+ N +RA G + + ++ +S G +T ++
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 10/341 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A+E+F M +GC N S+T L+ +G ++A L M +
Sbjct: 236 ILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-N 294
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C P V TY++LI + + + KV+AL ++M +G PN TY LID + E
Sbjct: 295 CCPTVRTYTVLIYAL--SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L +M + P V T N + + G ID + + +S P+ T+N L+
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K K A++ M + S +++TYN +I + DL+ L LM + P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
T + G+ E+ G++ + + + V + L+D Y ++ +L
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
E M C P+ TY ++ + KE LV KM
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCK---EKKMKEASSLVAKM 570
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 167/384 (43%), Gaps = 44/384 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A ++ M ++G + ++ AL+ Y + G+ D AF +L+ M++ C
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN-SCG 401
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AEMEL 119
P+ TY+ LI K K ALL+ M + + P+ +TYN+LI +G+ K+ E
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI--HGQCKVNDLESAY 459
Query: 120 TLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L+ +++E+ PD WT + + G+++ ++ ++ G++ + + L+D Y
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 179 GKAGHFEKMSAVMEYM-------QKYHYSW----------------------------TI 203
K G + +++E M Y Y+ T+
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTY I+I + G +F M S +P T + + AY G E++ V+
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS-TNG 322
++ I+ D V + L+D Y RL L+ M GCKP +++ S N
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699
Query: 323 MKNHAKEFQ-DLVEKMDETCLAMK 345
MK E D V E +A+K
Sbjct: 700 MKETRSEIGIDSVSNTLEYEIALK 723
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 21/344 (6%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ E+A LF ++ +G AN +TAL+ Y + G D A+SLLE M N C P+
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA-CLPN 543
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++LI+ K + +L++ M T G++P VTY LI + F
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M+S +PDV T L A+ + G ++ ++ K GI P + T+ +L+D Y + G
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-------------MEYLFRLM 229
+ ++ M ++ +I+I +K+ +EY L
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALK 723
Query: 230 RSERIKPSCVTL-----CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
E++ T+ +L+ + + E+ ++ + + +N L+D
Sbjct: 724 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 783
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+L +AE +++ M + G P +Y+ +V G AK
Sbjct: 784 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK 827
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 146/365 (40%), Gaps = 39/365 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M ++ C +++T L+ A SG +A +L MK C+P+V+TY++L
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVL 340
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGI----------------------------------- 94
I K D+ + +LS+MS +G+
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
PNT TYN LI + + + L KML P + T N + +++ +
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
G+ P T+++ +D+ K G E+ + + ++ V Y +ID +
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G + L M ++ P+ T L+ K ++ S++ + + V
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ L+ + F V M G +PD TY + AY + GM +E D++
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM---LEEVDDVI 637
Query: 335 EKMDE 339
KM+E
Sbjct: 638 AKMNE 642
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 21/335 (6%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + +A L M+ G ++T L+ + G FD A + HM + Q
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL-GYQ 611
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ + + ++V +++ M+ +GI P+ VTY LID Y R +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQI-------------DTME-----KCYEKFQSA 162
L M+ C+P ++ ++ ++ + ++ +T+E K +EK
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G ++ + L+ + + E+ ++ +M++ S + YN ++D + G +
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L M + P + LV G EK +V + + D V + L+D
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ E ++++M+++GC+P+ +TY ++
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 21/333 (6%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G+CK E A+ L M + G + +++ + + G ++A +L + +K +
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK-AKGVK 506
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y+ LI K D +LL M PN+ TYN LI+ + K E
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ KML+ +P V T + G D K + S G QP + T+ L +Y
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E++ V+ M + +VTY ++ID + R G + + M KPS
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIM------------------LDTVFFNCLVDA 282
+ L++ H + ++ S + S+ + +D + L+
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 746
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + E +G++ M++RG P + Y +++
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 1/322 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
++ +++ N +F A+++ Y + G +A L PD TY+ LI
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGH 239
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D + M +G + N V+Y LI A E M ++C P V
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + A SG+ + + + G +P+++T+ +L+D K ++ ++
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + ++VTYN +ID + + G + + LM S P+ T L+ K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
K ++L + + + +N L+ ++ +L +M + G PD+ TY
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 314 MVRAYSTNGMKNHAKEFQDLVE 335
+ G A D V+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVK 501
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 110/256 (42%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + Y+ ++ S K D+++ + ++ I PN T+N +++ Y + E EL
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
K++ PD +T + + +D + + G Q + ++ L+
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG + + M + + T+ TY ++I A +G + LF M+ + +P+
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K ++ +L + ++ V +N L+D Y + + +L++M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 300 QQRGCKPDKVTYRTMV 315
+ C P+ TY ++
Sbjct: 396 ESNSCGPNTRTYNELI 411
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
F KM+A E+ + T+ YN ++ + + + +M+ ++ + + +I P+ T +
Sbjct: 144 FRKMNADGEF----KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V Y G + I + + DT + L+ + R K V +M Q+G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEKMDETC 341
C+ ++V+Y ++ G N A K F D+ E D C
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTE--DNCC 296
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 12/353 (3%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C E H L F+ M C N +++T L+ +SG ++A L M +
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLE 279
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI+ LL M T G+ PN T++ LIDA + + E +L
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ + + + + +G+ID ++ +K S G P ++++ L+D +
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + ++E M + + VTY I+ID R + + +F M + I P VT
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
VR+Y G+ E S++ + + + + V +N L+ Y L ++ EVM
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA---------KEFQDLVEKMDETCLAM 344
+G KP++ +Y ++R +++ K+ Q L+E + E L +
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPL 572
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 156/378 (41%), Gaps = 46/378 (12%)
Query: 1 MLGKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ H +F M GC ++TALL +G+ +A ++ M+
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMR-ADS 172
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PD + Y+ ++ +A ++ + LL + + G PN V YN LID Y A EME
Sbjct: 173 CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEME 229
Query: 119 LTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L M C P+V T + SG+++ + + AG++P++ T+ L+
Sbjct: 230 HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
GH + ++ M+ T++++IDA + +++ + + + +K
Sbjct: 290 QGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ V SL+ GK + +++ + + + D ++ L+D R K ++ +
Sbjct: 350 VNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLM 409
Query: 296 LEVMQQRGCK-----------------------------------PDKVTYRTMVRAYST 320
LE M ++G + PD VTY VR+Y
Sbjct: 410 LEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 321 NGMKNHAKEFQDLVEKMD 338
G A+ +V+ +D
Sbjct: 470 EGRMEDAESM--IVQMVD 485
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 143/362 (39%), Gaps = 50/362 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A LF MV+ G + N ++TAL+ G AF LL H+ T
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HLMETNGLV 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T+S+LI + K ++ Q L + +G++ N V Y +LID + +
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQI--------DTMEK------------------ 154
+ KM+SE PD + + + ++ D MEK
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Query: 155 ---------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
++K + GI P I T+ + + SY + G E +++ M +VT
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I + G + Q F +M + KP+ + L+R + + + D
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554
Query: 266 NSD--IMLDTV----------FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
D ++L+ + ++C + R+ E K MQ P + Y +
Sbjct: 555 MKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614
Query: 314 MV 315
++
Sbjct: 615 II 616
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 4/312 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++T L++AY +G A L + + PD Y+ + +A +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVLGYCRAGMLTHACRV 129
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M +G TY L+ A M E V M ++ C PD +
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+ + E E+ S G +P+I +N L+D Y AG E V E M S + T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y +I ++G +++ LF M ++P+ VT +L++ + G + +L ++
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + F+ L+DA + + E + L + ++G K ++V Y +++ G +
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 326 HAKEFQDLVEKM 337
A E L++KM
Sbjct: 370 AADE---LMQKM 378
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 2/327 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +++ G ++ ++T+ + Y R+G+ A + M C TY+ L+
Sbjct: 91 AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTYTALL 149
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
L A + + M P+T Y T++ A E E+ L + +S E
Sbjct: 150 HGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ N + + N+G+++ K +E P++ T+ L+ K+G E+ +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + +VTY +I G L+ L LM + + P+ T L+ A
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K E+ L + + ++ V + L+D + +++ M G PD +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 311 YRTMVRAYSTNGMKNHAK-EFQDLVEK 336
Y +++ + A +D++EK
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 112/307 (36%), Gaps = 46/307 (14%)
Query: 50 LEHMKNTPDCQ-PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
L H +P P + + L+ + + F +++L S M + +R TY TLI+AY
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAY 82
Query: 109 GRAKMFAEMELTLVKMLSEDCEPD-----------------------------------V 133
A + L +L PD
Sbjct: 83 CLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTA 142
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
+T L +G + + ++ P + + ++ +AG E+ ++E
Sbjct: 143 FTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ IV YN +ID + AG+++ +F M R P+ T L+ +GK
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK 262
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVT 310
E+ + + + + + V + L+ G L+C + L +M+ G P+ T
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL---LHLMETNGLVPNDWT 319
Query: 311 YRTMVRA 317
+ ++ A
Sbjct: 320 FSVLIDA 326
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 25/352 (7%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + + A ++F+ M C N ++ ++S RSG ++AF E M + PD
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY-GLSPDA 315
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY L+ K + +ALL +MS G++PN V Y TL+D + + AE L +
Sbjct: 316 FTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNE 375
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS----YG 179
M+S +P+ + +R GQ+ K + G +P T++ L+ Y
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G FE ++ M+ TY I+I+ + G+ K+ L M SE +KP+
Sbjct: 436 KDGAFE----LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
L+ + G L + ++++ D +N L+ + E + +
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 300 QQRGCKPDKVTYRTMVRAYS----------------TNGMKNHAKEFQDLVE 335
Q+RG PD+ TY ++ Y +G+K +A + DL+E
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLE 603
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 149/334 (44%), Gaps = 3/334 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK Q +A +L M+ G +T ++ L+ + + D AF LL M+N+
Sbjct: 394 GLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNS-GIL 452
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY I+I + + LL +M ++G++PN Y LI + + + +
Sbjct: 453 PNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACES 512
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + PD++ N ++ G+I+ E+ Y + Q G+ P T++ L+ Y K
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 572
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ EK +++ M TY +++ + ++ D +++ + + M KP
Sbjct: 573 TRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHI 632
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++R + E VL ++ + ++ D ++ L+ ++ + G+L+ M
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ G +P V Y ++ + +G + A+ D +
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 136/356 (38%), Gaps = 37/356 (10%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
G C+ E +A L + M+ EG N + L+ + + G A LE+M P
Sbjct: 464 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLP 523
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
D PD TYS LI K +K LL
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G++PN TY L++ Y ++ ++ L ML +PD +R S
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
++ + + G+ P ++ ++ L+ K EK +++ M K IV Y
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +ID F R+GD+ + +F + ++ + P+CVT +L+ G + + + +
Sbjct: 704 NALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD 763
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
I D +N L + + E M RG + + T+VR + G
Sbjct: 764 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL-FSTLVRGFCKRG 818
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 4/264 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS +++ KA FD + + +M + N VTYN +I R+ E
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ PD +T + G++ + ++ +G++P++ + L+D + K
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + ++ M + Y+ +I + G L + L M +P T
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 241 LCSLVRAYGHAGKPEKLGS--VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L++ GH +K G+ +L + NS I+ + + +++ + E +LE
Sbjct: 423 YHPLMQ--GHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNG 322
M G KP+ Y ++ +S G
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEG 504
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 111/310 (35%), Gaps = 68/310 (21%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---KNTPDCQ 60
K + EKA +L Q M++ G N ++T LL Y +S +K S+L+ M + PD
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631
Query: 61 -------------------------------PDVNTYSILIKSCLKAFAFDKVQALLSDM 89
PD++ YS LI K +K LL +M
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+ +G+ P V YN LID + R+ + +L++ P+ T + +G I
Sbjct: 692 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDI 751
Query: 150 DTMEKCYEKFQSAGIQPS----------------------------------INTFNILL 175
Y+ GI P ++ F+ L+
Sbjct: 752 TDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLV 811
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ K G ++ ++ M T VI FG+AG L + +F ++ ++
Sbjct: 812 RGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871
Query: 236 PSCVTLCSLV 245
S SL+
Sbjct: 872 QSSTDRFSLL 881
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 6/251 (2%)
Query: 98 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
T + L+D Y + ++ M P N L+ + ++ + K
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ AGI P + T++ L+++ KA F+ V E M++ + VTYN++I R+G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+++ M + P T +L+ G+ ++ ++L + S + + V +
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
LVD + + AE +L M G +P+K+ Y ++R G A + +
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL------L 408
Query: 338 DETCLAMKRPD 348
+E RPD
Sbjct: 409 NEMIKVGHRPD 419
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 35/262 (13%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+K L+A A + V L M GI P+ TY+T ++A+
Sbjct: 216 LLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAH-------------------- 255
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C R F D +K +E+ + + T+N+++ ++G E+
Sbjct: 256 ---------CKARDF------DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E M Y S TY +++ + G LK+ + L M +KP+ V +LV +
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + +L + ++ + + + ++ L+ ++ +L M + G +PD
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
TY +++ + + K+ A E
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFEL 442
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 147/323 (45%), Gaps = 12/323 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A LF M ++G N ++ +++ + SG + +A LL M PDV T+S+LI
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER-KMSPDVVTFSVLI 325
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ +K F + + L ++M +GI PNT+TYN++ID + + E M ++ C
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS 385
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T + + + + ++D K + G+ + T+ L+ + + G+ +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-----------IKPSCV 239
++ M +VT N ++D G LK +F++M+ + ++P
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ + GK + + + + ++ DT+ +N ++D + E + + M
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+G PD VT+ T++ Y G
Sbjct: 566 GSKGFSPDVVTFTTLINGYCKVG 588
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL+ M+ G NT ++ +++ + + D A + ++ T C PDV T+SIL
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF-YLMATKGCSPDVITFSIL 394
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSED 128
I A D LL +MS +G+ NT+TY TLI + + + A ++L L +M+S
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL-LQEMISSG 453
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA-----------GIQPSINTFNILLDS 177
P+V T N L N+G++ + ++ Q + ++P + T+NIL+
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G F + + E M +TYN VID + L + +F M S+ P
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +L+ Y G R D L+ F EM
Sbjct: 574 VVTFTTLINGYCKVG---------RVGDG-------------------LEVFCEMG---- 601
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+RG + +TYRT++ + G N A + FQ+++
Sbjct: 602 ---RRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 152/380 (40%), Gaps = 48/380 (12%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C++ +A L MV++G N ++ ++ + G A +LL M+
Sbjct: 184 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR 243
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+P+V YS +I K Q L S+M +GI PN TYN +I+ + + ++E +
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303
Query: 119 LTLVKMLSEDCEPDVWTM-----------------------------------NCTLRAF 143
L +M PDV T N + F
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
++D E+ + + G P + TF+IL+D Y A + ++ M +
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+TY +I F + G+L L + M S + P+ VT +L+ + GK + + +
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483
Query: 264 IDNSDIMLDTVF-FNCL---VDAYGRLKC-------FAEMKGVLEVMQQRGCKPDKVTYR 312
+ S + LD FN + V Y L C F+E + + E M RG PD +TY
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543
Query: 313 TMVRAYSTNGMKNHAKEFQD 332
+++ + A + D
Sbjct: 544 SVIDGLCKQSRLDEATQMFD 563
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C N +FT L++ R G +A +LL+ M QP+ TY ++ K
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSA 231
Query: 83 QALLSDMS-TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
LL M I+PN V Y+ +ID + + + +M + P+++T NC +
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F +SG+ ++ + + P + TF++L+++ K G F + + M
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+TYN +ID F + L E +F LM ++ P +T L+ Y A + + +L
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ ++ +T+ + L+ + +L +L+ M G P+ VT T++ N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471
Query: 322 GMKNHAKEFQDLVEK 336
G A E +++K
Sbjct: 472 GKLKDALEMFKVMQK 486
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 18/321 (5%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLE--HMKNTPDCQPDV 63
K + A +LF MV F LL R D SL M+ P C ++
Sbjct: 55 KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP-C--NI 111
Query: 64 NTYSILIK---SCLK-AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+++ILIK SC K FA + ++ G P+ VT++TL+ +E
Sbjct: 112 YSFTILIKCFCSCSKLPFAL----STFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA-- 165
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ + C+P+V + G++ ++ G+QP+ T+ ++D
Sbjct: 166 --LHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 223
Query: 180 KAGHFEKMSAVMEYMQKY-HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G ++ M++ +V Y+ +ID + G + LF M+ + I P+
Sbjct: 224 KMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNL 283
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T ++ + +G+ + +LR + + D V F+ L++A + F E + +
Sbjct: 284 FTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNE 343
Query: 299 MQQRGCKPDKVTYRTMVRAYS 319
M RG P+ +TY +M+ +S
Sbjct: 344 MLPRGIIPNTITYNSMIDGFS 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 45/241 (18%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP----------DCQ 60
A +L Q M+ G N + LL +G A + + M+ + D +
Sbjct: 442 ALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVE 501
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ILI + F + + L +M +G+ P+T+TYN++ID +
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCK---------- 551
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++D + ++ S G P + TF L++ Y K
Sbjct: 552 -------------------------QSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G V M + +TY +I F + G++ +F+ M S + P +T
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Query: 241 L 241
+
Sbjct: 647 I 647
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 9/306 (2%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA----FAFDKVQA 84
S+T+L++AY R+ L ++A +LL+ MK T P TY+ ++ +C +A FD +
Sbjct: 176 SYTSLIAAYARNALHEEARALLDQMKAT-GVAPTAATYNTVLAACARATDPPVPFDMLLG 234
Query: 85 LLSDM---STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L ++M ++ +RP+ TYNTL+ A + + E+ L ML PD + +
Sbjct: 235 LFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD 294
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
AF ++G + + + + + G + + L++++ + G AV+ MQ +
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T TY +++D +GR G + LFR MR+ + P T L R +G G +++ +
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELF 413
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + D V ++ A G + + VLE M + G P Y +V A
Sbjct: 414 HDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHA 473
Query: 322 GMKNHA 327
M A
Sbjct: 474 AMYEEA 479
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ELF M G A+ ++ L+ A+ R G A ++L M+ C P TY +L
Sbjct: 304 RAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ-ADGCAPTAATYRVL 362
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + FD V+ L +M T + P+T TYN L +G F E+ ML
Sbjct: 363 LDLYGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGV 421
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD+ T + A G+ G + E G+ P+ + + L+++ G A +E+
Sbjct: 422 QPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYV 481
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF-RLMRSERIKPSCVTLCSLVRAY 248
M + T+ TYN + A+ R G ++ E +F R+ + I+ S + +L+ AY
Sbjct: 482 AFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAY 541
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + + S D +++AY E K E +Q P
Sbjct: 542 CQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSV 601
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ Y M+ Y+ N + + DL+E+M
Sbjct: 602 IAYCMMLSLYARN---DRWTDAYDLLEEM 627
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 51/348 (14%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI-----------LIKSCLKA 76
Q F A+ + R G + ++ L ++M+ C+PD + ++I L+ CL+
Sbjct: 104 QDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEV 163
Query: 77 FA------------------------FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK 112
F ++ +ALL M G+ P TYNT++ A RA
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 113 -----------MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 161
+FAEM S PD+ T N L A D E
Sbjct: 224 DPPVPFDMLLGLFAEMR----HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLE 279
Query: 162 AGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ 221
AG+ P ++ ++D++ AG+ + + + M ++ Y +++A R G
Sbjct: 280 AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATAD 339
Query: 222 MEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD 281
+ R M+++ P+ T L+ YG G+ + + + R + + + DT +N L
Sbjct: 340 AVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFR 398
Query: 282 AYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+G F E+ + M + G +PD VT ++ A G+ A+E
Sbjct: 399 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDARE 446
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 36/226 (15%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG E+A+ F M + G +++ AL AY R GLF +A ++ M N
Sbjct: 470 LGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSN------ 523
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
GI+ + +++ LI+AY + +
Sbjct: 524 -----------------------------NAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++M PD ++ L A+ +G ID ++ +E+ QS+ PS+ + ++L Y +
Sbjct: 555 MEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARN 614
Query: 182 GHFEKMSAVMEYMQKYHYSWT-IVTYNIVIDAFGRAGDLKQMEYLF 226
+ ++E M+ S T V +++ + + + + +EY+
Sbjct: 615 DRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVL 660
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 15/320 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A +LF+ M +G S+T+L+ +++A L M N QP
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQ-GVQP 302
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+++LI K + + LL M +GI PN +TYN+LI+ +
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY--- 178
V M S+ CEPDV + + + +++ K Y G +P + T+ LL
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 422
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GK G +K+ VM+ Y + Y I ++ + G L + LF ++S IK
Sbjct: 423 GKVGDAKKLFGVMKV---YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDI 479
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
L+ AGK E + + ++ D V +N ++ + R + + +
Sbjct: 480 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 539
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
M++ GC PDK+TY T++R +
Sbjct: 540 MEKNGCTPDKITYATLIRGF 559
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 118/300 (39%), Gaps = 36/300 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF MV++G N +F L+ + G +A LLE M P++ TY+
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR-GIVPNLLTYNS 344
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI+ + + L M ++G P+ + Y LI+ Y + E ML
Sbjct: 345 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 404
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEK---------------------------------- 154
PDV T L G++ +K
Sbjct: 405 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 464
Query: 155 -CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ K +S I+ I FN L+D KAG E + E + + +VTYNI+I F
Sbjct: 465 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 524
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + + LF+ M P +T +L+R + + K EK+ +L + D+ LD
Sbjct: 525 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 146/346 (42%), Gaps = 23/346 (6%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + F M+ SFT LLS + + + F L M+ PD T +IL
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR-LSGISPDCCTLNIL 137
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + A+++ + +G P+ VTY TLI ++ L +M C
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEK------FQSAGIQPSINTFNILLDSYGKAGH 183
P+ T ++ +G I K +++ +P + +++I++D+ K
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + E M+ + T+++Y ++ ++ + LF M ++ ++P+ VT
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNV 309
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ GK + +L + I+ + + +N L++ + + + + M +G
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369
Query: 304 CKPDKVTYRTMVRAY-STNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C+PD + Y ++ Y T+ ++ K + +++ KRPD
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ-------VGKRPD 408
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+P +A E F + ++G N ++ +LS + + A+ L M + + + T
Sbjct: 160 KKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM-NIRSSLYT 218
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++I+I K K + + M T G++PN VTYNT+I + F + M
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMK 278
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ EPD +T N + G+++ K G+ P+ T+N L+D Y G +
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K A + M ++VTYN+ I A G + + + + MR + + P VT L+
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
Y G ++ +L + I V + L+ G+ E + +QQ G
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
PD + + ++ + NG N + FQ L+++MD
Sbjct: 459 PDIIVFNALIDGHCANG--NIDRAFQ-LLKEMD 488
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 142/314 (45%), Gaps = 36/314 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +FQ M D+G + + ++ + +S + G ++A L+ M P+ TY+
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYNA 326
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI DK A +M ++GI + VTYN I A +F E
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA-----LFME------------ 369
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
G G D M K + + G+ P T NIL++ Y + G ++
Sbjct: 370 ---------------GRMGDADNMIK---EMREKGMMPDAVTHNILINGYCRCGDAKRAF 411
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M T+VTY +I G+ +K+ + LF ++ E + P + +L+ +
Sbjct: 412 GLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGH 471
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ +L+ +DN ++ D + +N L+ Y R E + +L+ M++RG KPD
Sbjct: 472 CANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDH 531
Query: 309 VTYRTMVRAYSTNG 322
++Y T++ YS G
Sbjct: 532 ISYNTLISGYSKRG 545
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA+ M+ +G A+ ++ + A G A ++++ M+ PD T++I
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK-GMMPDAVTHNI 396
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + + LL +M +GI+P VTY +LI G+ E + K+ E
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD+ N + +G ID + ++ + + P T+N L+ Y + G E+
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M++ ++YN +I + + GD+K + M + P+ +T +L++
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+ E +L+ + + I D + +++A
Sbjct: 577 CKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK + ++A LF + EG + F AL+ + +G D+AF LL+ M N
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM-KVL 493
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ L++ + ++ + LL +M +GI+P+ ++YNTLI Y + +
Sbjct: 494 PDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+M++ +P + T N ++ + + + E+ ++ S GI P +T+
Sbjct: 554 RDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E+A E+F M+ G ++ ++ +LL + G + ++ M+ + D
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMR-SRDVV 362
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ +S ++ ++ DK + + G+ P+ V Y LI Y R M +E
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML + C DV T N L + +K + + G+ P T IL+D + K
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ + + + M++ +VTYN ++D FG+ GD+ + ++ M S+ I P+ ++
Sbjct: 483 LGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 542
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV A G + V + + I + N ++ Y R ++ + LE M
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI 602
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G PD ++Y T++ + +N +K F LV+KM+E
Sbjct: 603 SEGFVPDCISYNTLIYGFVKE--ENMSKAF-GLVKKMEE 638
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 11/330 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA F ++ + G + +T L+ Y R G+ +A +L M C DV TY+
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ-GCAMDVVTYNT 440
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMELTLVKMLSE 127
++ K + L ++M+ +G+ P++ T LID + + + MEL KM +
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL-FKKMKEK 499
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ DV T N L FG G IDT ++ + S I P+ +F+IL+++ GH +
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V + M T++ N +I + R+G+ E M SE P C++ +L+
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI-- 617
Query: 248 YGHAGKPEKLGSVLRFIDNSD-----IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
YG K E + + + ++ D +N ++ + R E + VL M +R
Sbjct: 618 YGFV-KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G PD+ TY +++ + + A F D
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHD 706
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 1/324 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK + ++G + ++ L+SAY GL ++AF L+ H + P V TY+
Sbjct: 242 EKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM-HAMPSKGFSPGVYTYNT 300
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K +++ + + ++M G+ P++ TY +L+ + E E M S D
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD+ + + F SG +D + + AG+ P + IL+ Y + G +
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + + +VTYN ++ + L + + LF M + P TL L+ +
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGH 480
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + + + + I LD V +N L+D +G++ K + M + P
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQD 332
+++ +V A + G + A D
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWD 564
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 158/343 (46%), Gaps = 8/343 (2%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
++ CK+ + + +F M + F++++S + RSG DKA +K
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-G 395
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD Y+ILI+ + + L ++M QG + VTYNT++ + KM E +
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+M PD +T+ + G + + ++K + I+ + T+N LLD +
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GK G + + M T ++++I+++A G L + ++ M S+ IKP+
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ S+++ Y +G L + + + D + +N L+ + + + ++ G+++
Sbjct: 576 MICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKK 635
Query: 299 MQQR--GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M+++ G PD TY +++ + +N KE + ++ KM E
Sbjct: 636 MEEKQGGLVPDVFTYNSILHGFCR---ENQMKEAEAVLRKMIE 675
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 140/327 (42%), Gaps = 4/327 (1%)
Query: 13 ELFQAMVD--EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
E+ ++V C +N F L+ + ++ +A+ ++ + ++ + LI
Sbjct: 139 EIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLR-SKGYTVSIDACNALI 197
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S ++ + + ++S G+ N T N +++A + ++ L ++ +
Sbjct: 198 GSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVY 257
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T N + A+ + G ++ + S G P + T+N +++ K G +E+ V
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + S TY ++ + GD + E +F MRS + P V S++ +
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+G +K + + ++ D V + L+ Y R +E + M Q+GC D VT
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437
Query: 311 YRTMVRAYSTNGMKNHA-KEFQDLVEK 336
Y T++ M A K F ++ E+
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTER 464
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 100/235 (42%), Gaps = 17/235 (7%)
Query: 98 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT------ 151
+++ + +I R+ ++ + +++M+ V +N + + N G D+
Sbjct: 103 SLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLI 162
Query: 152 --------MEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ + YE F +S G SI+ N L+ S + G E + + + +
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
+ T NI+++A + G ++++ ++ + + P VT +L+ AY G E+ +
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + + +N +++ + + K V M + G PD TYR+++
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++ M+ + +++ Y RSG LE M + PD +Y+ L
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI-SEGFVPDCISYNTL 616
Query: 70 IKSCLKAFAFDKVQALLSDMSTQ--GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
I +K K L+ M + G+ P+ TYN+++ + R E E L KM+
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + F + + + +++ G P
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 3/330 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E +A ELF MV GC + ++T +++ + G A L++ M CQ
Sbjct: 170 GLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV-GCQ 228
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TYS LI S K ++ + S M +GI P V+Y +LI + E
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAM 288
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M S + PD+ T + + F G + + + G++P++ T+N L+ Y
Sbjct: 289 LNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M + +Y+I+I+ + + + + LF M + + P+ V+
Sbjct: 349 QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ A+ GK + + + + + + D ++ L++ + + + + MQ
Sbjct: 409 YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
KP+ V Y ++ + +G NHA++
Sbjct: 469 GTYLKPNLVMYTILIDSMCKSGNLNHARKL 498
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 153/334 (45%), Gaps = 3/334 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++F M +G S+T+L+ + +A ++L M + + PD+ T+S+L
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL-NIMPDIVTFSLL 307
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K + Q +L M+ G+ PN +TYN+L+ Y E M++ C
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGC 367
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PDV++ + + + +ID ++ + + G+ P+ ++ L+ ++ + G +
Sbjct: 368 KPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARE 427
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ + M Y + TY+++++ F + G L + LFR M+ +KP+ V L+ +
Sbjct: 428 LFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMC 487
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+G + + + D + +++ + E M++ GC P++
Sbjct: 488 KSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEF 547
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+Y ++R + + K+ ++ Q + E D+ +A
Sbjct: 548 SYNVIIRGFLQH--KDESRAVQLIGEMRDKGFVA 579
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 3/309 (0%)
Query: 30 FTALLSAYGR-SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
F LLSA R +D SL + M+ P+ T +ILI D ++L+
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQME-LAGLSPNTCTLNILINCFCLMQHVDLGFSVLAK 151
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+ G++P +T+ TLI+ +A FA+ M++ C+PDV+T + G+
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGE 211
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+K G QP + T++ L+DS K + + YM+ S T+V+Y
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I K+ + M S I P VT L+ + G + VL+ +
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ + + +N L+ Y E + + +VM RGCKPD +Y ++ Y + AK
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 329 E-FQDLVEK 336
+ F +++ +
Sbjct: 392 QLFNEMIHQ 400
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 1/305 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
++ G +FT L++ ++G F +A L + M CQPDV TY+ +I K
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV-ARGCQPDVYTYTTIINGLCKMG 210
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
L+ M G +P+ VTY+TLID+ + ++ E M ++ P V +
Sbjct: 211 ETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYT 270
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
++ + + + S I P I TF++L+D + K G+ + V++ M +
Sbjct: 271 SLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM 330
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
++TYN ++ + ++ + LF +M + KP + L+ Y + ++
Sbjct: 331 GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEA 390
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + + + +TV + L+ A+ +L E + + + M G PD TY ++
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450
Query: 318 YSTNG 322
+ G
Sbjct: 451 FCKQG 455
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 144/316 (45%), Gaps = 3/316 (0%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C E H L F+ M C N +++T L+ +SG ++A L M +
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLE 279
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI+ LL M T G+ PN T++ LIDA + + E +L
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ + + + + +G+ID ++ +K S G P ++++ L+D +
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + ++E M + + VTY I+ID R + + +F M + I P VT
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
VR+Y G+ E S++ + + + + V +N L+ Y L ++ EVM
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 301 QRGCKPDKVTYRTMVR 316
+G KP++ +Y ++R
Sbjct: 520 GKGWKPNEDSYTVLLR 535
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 45/346 (13%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A LF MV+ G + N ++TAL+ G AF LL H+ T
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HLMETNGLV 314
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T+S+LI + K ++ Q L + +G++ N V Y +LID + +
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQI--------DTMEK------------------ 154
+ KM+SE PD + + + ++ D MEK
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Query: 155 ---------CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
++K + GI P I T+ + + SY + G E +++ M +VT
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I + G + Q F +M + KP+ + L+R + + + D
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554
Query: 266 NSDIM---LDTVFFNCLVDAYGRLK--CFAEMKGVLEVMQQRGCKP 306
D+ D + + L+ YG L+ AE +L VM++ G +P
Sbjct: 555 MKDLQESNYDEIVWKILI--YGLLQKGSVAEFSSLLSVMKEHGYQP 598
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 156/378 (41%), Gaps = 46/378 (12%)
Query: 1 MLGKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ H +F M GC ++TALL +G+ +A ++ M+
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMR-ADS 172
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C PD + Y+ ++ +A ++ + LL + + G PN V YN LID Y A EME
Sbjct: 173 CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEME 229
Query: 119 LTLV---KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L M C P+V T + SG+++ + + AG++P++ T+ L+
Sbjct: 230 HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALI 289
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
GH + ++ M+ T++++IDA + +++ + + + +K
Sbjct: 290 QGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
+ V SL+ GK + +++ + + + D ++ L+D R K ++ +
Sbjct: 350 VNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLM 409
Query: 296 LEVMQQRGCK-----------------------------------PDKVTYRTMVRAYST 320
LE M ++G + PD VTY VR+Y
Sbjct: 410 LEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 321 NGMKNHAKEFQDLVEKMD 338
G A+ +V+ +D
Sbjct: 470 EGRMEDAESM--IVQMVD 485
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 4/312 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++T L++AY +G A L + + PD Y+ + +A +
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVLGYCRAGMLTHACRV 129
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M +G TY L+ A M E V M ++ C PD +
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+ + E E+ S G +P+I +N L+D Y AG E V E M S + T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y +I ++G +++ LF M ++P+ VT +L++ + G + +L ++
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ ++ + F+ L+DA + + E + L + ++G K ++V Y +++ G +
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 326 HAKEFQDLVEKM 337
A E L++KM
Sbjct: 370 AADE---LMQKM 378
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 16/245 (6%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A EL Q M+ EG + S+++L+ R +A +LE M Q
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK-GIQ 419
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
TY+I+I ++ + + + M GI P+ VTY + +Y + E
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+V+M+ P++ T N +R + N G + +E G +P+ +++ +LL K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 181 AGHFEKMSAV-----MEYMQKYHYS---WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+ + M+ +Q+ +Y W I+ Y ++ + G + + L +M+
Sbjct: 540 KSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLL-----QKGSVAEFSSLLSVMKEH 594
Query: 233 RIKPS 237
+PS
Sbjct: 595 GYQPS 599
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 125/305 (40%), Gaps = 1/305 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +++ G ++ ++T+ + Y R+G+ A + M C TY+ L+
Sbjct: 91 AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTYTALL 149
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
L A + A+ M P+T Y T++ A E E+ L + +S E
Sbjct: 150 HGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ N + + N+G+++ K +E P++ T+ L+ K+G E+ +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + +VTY +I G L+ L LM + + P+ T L+ A
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K E+ L + + ++ V + L+D + +++ M G PD +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 311 YRTMV 315
Y +++
Sbjct: 390 YSSLI 394
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 46/307 (14%)
Query: 50 LEHMKNTPDCQ-PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
L H +P P + + L+ + + F +++L S M + +R TY TLI+AY
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAY 82
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
A + L +L PD + + + +G + + + G +
Sbjct: 83 CLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTA 142
Query: 169 NTFNILLDSYGKAGHFEKMSAVM-------------EYMQKYH----------------- 198
T+ LL AG + AV Y H
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202
Query: 199 -----YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ IV YN +ID + AG+++ +F M R P+ T L+ +GK
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK 262
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVT 310
E+ + + + + + V + L+ G L+C + L +M+ G P+ T
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL---LHLMETNGLVPNDWT 319
Query: 311 YRTMVRA 317
+ ++ A
Sbjct: 320 FSVLIDA 326
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ + +AHEL + G T S+ +L+ L D A L MK C PD
Sbjct: 810 CKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPD 868
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++L+ + K+ +++ + +M +G VTYNT+I +++ +
Sbjct: 869 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 928
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++S+ P T L +G+I+ E + + G + + +NILL+ + AG
Sbjct: 929 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 988
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ EK+ + + M + I +Y I+ID +AG L FR + ++P +T
Sbjct: 989 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1048
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ G + + E+ S+ + I+ + +N L+ G+ AE + E + +
Sbjct: 1049 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1108
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++R YS +G + A
Sbjct: 1109 GWKPNVFTYNALIRGYSVSGSTDSA 1133
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 145/357 (40%), Gaps = 37/357 (10%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M + G N ++ L+ +SG +A + + M P V TYS+L+ +
Sbjct: 227 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMM-VDGVVPSVRTYSVLMVAFG 285
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + V LL +M G++PN +Y I G+A+ F E L +M +E C+PDV
Sbjct: 286 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVI 345
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T ++ ++G+I + + K + + +P T+ LLD + G + + + M
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAM 405
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDL-----------------KQMEY------------- 224
+ Y+ +V Y VIDA + G + +Q Y
Sbjct: 406 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 465
Query: 225 -----LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF+ M KP+ T + YG +G+ K + + I+ D V N +
Sbjct: 466 GDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 525
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ + K V ++ G PD +TY M++ S + A K F D++E
Sbjct: 526 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 582
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 145/313 (46%), Gaps = 9/313 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + E++ AM +G + N ++TA++ A + G +A + + MK P+ +Y
Sbjct: 394 ESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSY 452
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEMELTLV 122
+ LI LKA F L M G +PN T+ I+ YG++ K EL
Sbjct: 453 NSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL--- 509
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M S+ PDV N L SG++ ++ + + ++ G+ P T+ +++ KA
Sbjct: 510 -MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 568
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
F++ + M + + ++ N +ID +AG + +F ++ ++P+ T
Sbjct: 569 KFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYN 628
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ G GK +++ +L + +S+ + + +N ++D + + +L M +
Sbjct: 629 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 688
Query: 303 GCKPDKVTYRTMV 315
GC PD +Y T++
Sbjct: 689 GCIPDLSSYNTVI 701
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 138/326 (42%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E L + M G N S+T + G++ FD+A+ +L M+N C+P
Sbjct: 284 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENE-GCKP 342
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+++LI+ A + + M +P+ VTY TL+D + +
Sbjct: 343 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIW 402
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M ++ +V + A G++ + +++ + GI P ++N L+ + KA
Sbjct: 403 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 462
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + +YM + T+ + I+ +G++G+ + + LM+S+ I P V
Sbjct: 463 DRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 522
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G+ V + + DT+ + ++ + F E + M +
Sbjct: 523 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 582
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
C PD + +++ G + A
Sbjct: 583 NNCVPDVLVVNSLIDTLYKAGRGDEA 608
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK LFQ MVD+G + + +S+T ++ ++G + + + +PD+ TY++
Sbjct: 991 EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-GLEPDLITYNL 1049
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L ++M +GI PN TYN+LI G+A AE ++L++
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1109
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI--LLDSY--GKAGHF 184
+P+V+T N +R + SG D+ Y + G P+ +T +I L+ ++ G + +
Sbjct: 1110 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSY 1169
Query: 185 EKMSAVM--EYMQKYHYSW 201
E + + E M Y +W
Sbjct: 1170 EIIVTFINAEGMLAYSRAW 1188
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++ ++A+ + M +EGC + + T L+ +G A + MK + D +
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS-DQK 376
Query: 61 PDVNTYSIL---------------IKSCLKAFAF-DKVQA-------------------L 85
PD TY L I + +KA + D V A +
Sbjct: 377 PDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEM 436
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M +GI P +YN+LI + +A F + M +P+ +T + +G
Sbjct: 437 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGK 496
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+ + YE +S GI P + N +L K+G V ++ S +T
Sbjct: 497 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 556
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++I +A + +F M P + + SL+ AG+ ++ + +
Sbjct: 557 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ +N L+ GR E+ +LE M P+ +TY T++ NG N
Sbjct: 617 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 676
Query: 326 HA 327
A
Sbjct: 677 DA 678
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 132/311 (42%), Gaps = 3/311 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E+F M + AN +F A+ G G A L MK + TY+ L+
Sbjct: 190 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA-GIVLNAYTYNGLVYF 248
Query: 73 CLKAFAFDK-VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+K+ FD+ + M G+ P+ TY+ L+ A+G+ + + L +M + +P
Sbjct: 249 LVKS-GFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 307
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+V++ +R G + + D + + ++ G +P + T +L+ AG V
Sbjct: 308 NVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 367
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+K VTY ++D F G+ + + ++ M+++ + V +++ A
Sbjct: 368 WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 427
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ + + + I+ + +N L+ + + F + + + M G KP+ T+
Sbjct: 428 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTH 487
Query: 312 RTMVRAYSTNG 322
+ Y +G
Sbjct: 488 VLFINYYGKSG 498
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 118/304 (38%), Gaps = 36/304 (11%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LIK K + L+ + G+ T +YN+LI + E +M
Sbjct: 805 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---------------------------- 160
C PD +T N L A G S +I+ M K E+
Sbjct: 865 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 924
Query: 161 -------SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
S G P+ T+ LLD KAG E + M +Y YNI+++
Sbjct: 925 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ +++ +LF+ M + I P + ++ AG+ + R + + D
Sbjct: 985 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1044
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQD 332
+ +N L+D G+ K E + MQ++G P+ TY +++ G A K +++
Sbjct: 1045 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1104
Query: 333 LVEK 336
L+ K
Sbjct: 1105 LLTK 1108
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 1/308 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+ +L ++ + GL +A +++ P + D ++ L++ LK +K
Sbjct: 730 TLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEI 789
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+++ GI + LI + K E + K S + N + +
Sbjct: 790 IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENL 849
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
ID E + + + G P T+N+LLD+ GK+ E+M V E M + Y T VTYN
Sbjct: 850 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 909
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+I ++ L+Q L+ + S+ P+ T L+ AG+ E ++ +
Sbjct: 910 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 969
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA- 327
+ +N L++ + ++ + + M +G PD +Y ++ G N
Sbjct: 970 CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGL 1029
Query: 328 KEFQDLVE 335
F+ L+E
Sbjct: 1030 TYFRQLLE 1037
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 19/237 (8%)
Query: 104 LIDAYGR----AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
L+ +GR A++F M+ +VK +V T G G + +
Sbjct: 178 LMRDHGRVGDMAEVFDVMQRQIVK-------ANVGTFAAIFGGLGVEGGLRSAPVALPVM 230
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AGI + T+N L+ K+G + V + M ++ TY++++ AFG+ D+
Sbjct: 231 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDV 290
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS----DIMLDTVF 275
+ + +L R M + +KP+ + +R G A + ++ +L ++N D++ TV
Sbjct: 291 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVL 350
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
L DA GR+ ++ K V M++ KPD+VTY T++ ++ NG E +
Sbjct: 351 IQVLCDA-GRI---SDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN 403
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 38/352 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +F + G +T ++T ++ ++ FD+A + M +C P
Sbjct: 529 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN-NCVP 587
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI + KA D+ + + + P TYNTL+ GR E+ L
Sbjct: 588 DVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 647
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P++ T N L +G ++ + G P ++++N ++ K
Sbjct: 648 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 707
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR-------------- 227
+ + ++ M+K T ++ +F + G +K+ ++ +
Sbjct: 708 ERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSS 766
Query: 228 ---LMR--------------SERIKPSCVT-----LCSLVRAYGHAGKPEKLGSVLRFID 265
LM +E I S +T LC L++ K + +++
Sbjct: 767 CHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 826
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ + L T +N L+ +G+ M++ GC PD+ TY ++ A
Sbjct: 827 SFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA 878
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 90/203 (44%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L + G++ M + ++ Q ++ ++ TF + G G + M++
Sbjct: 173 NYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 232
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
TYN ++ ++G ++ ++++M + + PS T L+ A+G E
Sbjct: 233 AGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVET 292
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ +LR ++ + + + + G+ + F E +L M+ GCKPD +T+ +++
Sbjct: 293 VLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQ 352
Query: 317 AYSTNGMKNHAKEFQDLVEKMDE 339
G + AK+ ++K D+
Sbjct: 353 VLCDAGRISDAKDVFWKMKKSDQ 375
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A ELF MV G + N S+T +++ ++G A + + M+ C+P+
Sbjct: 177 GKIKE---AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN-GCKPN 232
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TYS +I S K + LS+M +GI PN TYN+++ + E
Sbjct: 233 VVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFK 292
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ D P+ T + G + +E G++P I+T+N L+D Y
Sbjct: 293 EMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQR 352
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ V E M + + +YNI+I+ + ++ + + + L M + + P VT
Sbjct: 353 LMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYS 412
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L++ G+P++ ++ + + + + V + L+D + + E +L+ M+++
Sbjct: 413 TLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEK 472
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+P+ V Y ++ G AKE
Sbjct: 473 KLEPNIVHYTILIEGMFIAGKLEVAKEL 500
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 4/322 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M G + +F AL++ G +A L M +P+V +Y+ +I K
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH-EPNVISYTTVINGLCKTG 212
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ M G +PN VTY+T+ID+ + ++ + L +M+ P+V+T N
Sbjct: 213 NTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYN 272
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ F N GQ++ + +++ + P+ TF IL+D K G + V E M +
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK 332
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
I TYN ++D + + + + +F +M + P + L+ Y + + ++
Sbjct: 333 GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEA 392
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S+L + + + DTV ++ L+ +L E + + M G P+ VTY ++
Sbjct: 393 KSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDG 452
Query: 318 YSTNGMKNHAKEFQDLVEKMDE 339
+ +G H E L++ M E
Sbjct: 453 FCKHG---HLDEALKLLKSMKE 471
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 3/278 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A LF+ MV NT +FT L+ + G+ +A + E M +PD++TY
Sbjct: 283 QLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK-GVEPDISTY 341
Query: 67 SILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+ L+ CL+ ++ + + M +G P +YN LI+ Y +++ E + L +M
Sbjct: 342 NALMDGYCLQRL-MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ PD T + ++ G+ +++ S G P++ T+ ILLD + K GH +
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ M++ IV Y I+I+ AG L+ + LF + + +P T ++
Sbjct: 461 EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ G ++ + R +++ + ++ +N ++ +
Sbjct: 521 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 5/280 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P V + + S K + V +L + M + N + N LI+ R
Sbjct: 90 RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM PD T N + N G+I + + + G +P++ ++ +++
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSER-IKPS 237
K G+ V + M++ +VTY+ +ID+ + + ME+L ++ ER I P+
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV--ERGIPPN 267
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T S+V + + G+ + + + + D+M +TV F LVD + +E + V E
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
M ++G +PD TY ++ Y + N AK+ F+ ++ K
Sbjct: 328 TMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN--- 55
M G C Q +A ++F+ M+ +GC S+ L++ Y +S D+A SLL M +
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404
Query: 56 TPD-----------CQ--------------------PDVNTYSILIKSCLKAFAFDKVQA 84
PD CQ P++ TY IL+ K D+
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LL M + + PN V Y LI+ A + K+ + PD+ T ++
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G D + K + G P+ ++N+++ + + +++ M +S +
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLS 584
Query: 205 TYNIVID 211
T+ +++D
Sbjct: 585 TFQMLLD 591
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 93/218 (42%), Gaps = 1/218 (0%)
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +M+ + P V L +F Q T+ + + ++ + NIL++
Sbjct: 80 SFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLC 139
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ H + +V+ M K +T+N +I+ G +K+ LF M +P+ +
Sbjct: 140 RLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI 199
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +++ G V + ++ + + V ++ ++D+ + + + L M
Sbjct: 200 SYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
+RG P+ TY ++V + G N A + F+++V +
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR 297
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 153/339 (45%), Gaps = 21/339 (6%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQ 60
CK+ ++A +L M D+GC + ++ +++ + G D A +E +KN P C+
Sbjct: 206 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCE 262
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ +Y+I++K A ++ + L+ +M +G PN VT+N LI R +
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 322
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ C P+ + N L AF ++D + S G P I ++N LL + +
Sbjct: 323 LEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 382
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + ++ ++ + +++YN VID +AG K+ L M S+ ++P +T
Sbjct: 383 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 442
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMK 293
++ + E + + I +TV +N ++ + + + FA M
Sbjct: 443 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 502
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G GC P++ TY ++ + G+ A++ D
Sbjct: 503 G-------NGCMPNESTYTILIEGLAYEGLIKEARDLLD 534
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 126/309 (40%), Gaps = 15/309 (4%)
Query: 24 DANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
DA T + LSA GR+ E + C PDV Y+ ++ A D
Sbjct: 97 DAGTCAALIKKLSASGRTA---------EARRVLAACGPDVMAYNAMMAGYCGAGQVDAA 147
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ ++ + + + T +TLI GR + A L +ML C PDV T L
Sbjct: 148 RRWCAE---RAVERDAYTCDTLIRGLCGRGRT-ANALAVLDEMLRRRCVPDVVTYTILLE 203
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A K ++ + G P I T+N++++ + G + ++ + Y
Sbjct: 204 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 263
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
V+YNIV+ A + E L M + P+ VT L+ G E VL
Sbjct: 264 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 323
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
I +++ +N L+ A+ + K + L++M RGC PD V+Y T++ A +
Sbjct: 324 EQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 383
Query: 322 GMKNHAKEF 330
G + A E
Sbjct: 384 GEVDVAVEL 392
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 40/378 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K +PE+++++ + M+ GC+ + +F ++ + RS +KA + +HM + +P
Sbjct: 20 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES-GYKP 78
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK--------- 112
D +Y ILI K D+ +LS+M +G P+ Y++L+ A +A+
Sbjct: 79 DNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLF 138
Query: 113 -------------MFAEMELTL-----VKMLSE--------DCEPDVWTMNCTLRAFGNS 146
MF E+ L L VK SE C+P+V N L +S
Sbjct: 139 DEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSS 198
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
GQ++ + + +S P + T+N LLD+ KA E+ + E M+ Y ++T+
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I R G+L++ +F M KP+ T +L+ A K + + +
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ-QRGCKPDKVTYRTMVRAYSTNGMKN 325
+ I D V +N L+ Y + E + + M G +P VT+ T++ + G
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378
Query: 326 HAKEFQDLVEKMDETCLA 343
A E LV +M LA
Sbjct: 379 RANE---LVAEMGTKGLA 393
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 2/297 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q E+A+ LF M C + ++ LL A ++ ++ L E M+ P+V T+
Sbjct: 200 QLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR-AAGYVPNVITF 258
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S LI + +K + M G +PN TY TLI RA+ + KM
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS-AGIQPSINTFNILLDSYGKAGHFE 185
PD N + + G +D EK Y + AG+QP+I TFN L+D + K G
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + ++ M + TY I+I RA L + +++ MR ++ V+ S V
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 438
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
G ++ +V S + + F L ++ +L + + ++E + R
Sbjct: 439 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 158/339 (46%), Gaps = 4/339 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ + A ++ M + GC NT ++ L++ RSG ++AF + M++ PD
Sbjct: 129 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY-GLVPDG 187
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY LI K+ ++ +ALL +MS ++PN V Y LID + R E + +
Sbjct: 188 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 247
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M++ +P+ T + +R GQ+D ++ +P T+N++++ + + +
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++ M+ S + TY+I+I ++G+ ++ L M ++ +KP+
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G + + +++ D +N L+ ++ E MQ+RG
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
P++ TY ++ Y NG A++ LV++M +T L
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQ---LVQRMLDTGL 463
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 36/349 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ +A L M N + L+ + R G D+AF +++ M QP
Sbjct: 197 LCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQP 255
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TY L++ K D+ LL M RP+T+TYN +I+ + R + L
Sbjct: 256 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLL 315
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+V+T + + SG+ + E+ + G++P+ + L+ Y +
Sbjct: 316 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 375
Query: 182 GH-------FEKMSAVMEYMQKYHYSWTI----------------------------VTY 206
G+ F+KM+ V Y Y+ I TY
Sbjct: 376 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 435
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I + + GDL+ E L + M +KP+ V L+ +Y + EK+ S + + +
Sbjct: 436 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 495
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+MLD + L+ VL +++ G PD Y +++
Sbjct: 496 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLI 544
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 5/330 (1%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
P + +A+ D G + L+ Y +SG A ++ M++ P + +
Sbjct: 29 PVVLASIHRALSDSG-HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDR-GLAPSIRCCN 86
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+K L+A A + + M GI P+ TY+TLI+AY + + F + LV+M
Sbjct: 87 ALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRER 146
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C + T N + SG ++ + + G+ P T+ L++ K+ +
Sbjct: 147 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 206
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
A+++ M +V Y +ID F R G+ + + + M + ++P+ +T +LVR
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G+ ++ +L+ + DT+ +N +++ + R + +L M+ G P+
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
TY M+ +G A DL+E+M
Sbjct: 327 VYTYSIMIHGLCQSGEPEKA---SDLLEEM 353
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K EK F++M+D+G + + + L+ SG + AF +L ++ PDV
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV-PDV 537
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ YS LI K +K +L +MS +G+ PN V YN LID ++ +
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+L++ P+ T + G I Y + + GI P +++L AG
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+ ++E M ++ +I ++N ++D F + G +++ L ++ + P+ +T+ +
Sbjct: 658 LEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716
Query: 244 LVRAYGHAGKPEKLGSV 260
++ AGK ++ ++
Sbjct: 717 IISGLSEAGKLSEVHTI 733
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 71/409 (17%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---P 57
G C+ +PEKA +L + M +G N + L+S Y R G A + + M P
Sbjct: 336 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395
Query: 58 DCQ-------------------------------PDVNTYSILIKSCLKAFAFDKVQALL 86
D P+ TYS LI LK + + L+
Sbjct: 396 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 455
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M G++PN V Y L+++Y ++ ++ T ML + D + +S
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G ++ + + + G P ++ ++ L+ K EK +++ M K IV Y
Sbjct: 516 GNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG-------------- 252
N +ID ++GD+ +F + ++ + P+CVT SL+ G
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635
Query: 253 ---KPEK-LGSVLRF-------IDNSDIMLDTVF---------FNCLVDAYGRLKCFAEM 292
P+ + SVL ++ + +++ +F FN LVD + + E
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 695
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEKMDET 340
+L V+ RG P+ +T ++ S G + F +L +K E+
Sbjct: 696 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 744
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ + A L + + GC ++ ALL+ + G ++A LL + + C P
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTP 233
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ LI K + L +M+ +G+ +TV Y LI +A +
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M S+ C PDV T++ + +G+I + ++ ++ G+ P+ ++ L+ KA
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ ++ M+K + +TYNI+ID ++GD++ F M KP T
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
LV + AG + V + +S + V + L+ + + + + M++
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
RGC PD Y ++V +G
Sbjct: 474 RGCPPDSFVYSSLVDGLCKSG 494
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK K+ +A++LF+ M G +T +TAL+ ++G +A S+ + M + C P
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM-TSQGCVP 303
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELT 120
DV T S +I KA + M +G+ PN V Y+ LI +A KM +E+
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM- 362
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PD T N + SG ++ +++ AG +P + T+NIL+ + K
Sbjct: 363 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCK 422
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ + V + M H S +VTY +I + L + F+ M+ P
Sbjct: 423 AGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFV 482
Query: 241 LCSLVRAYGHAGKPE 255
SLV +GK E
Sbjct: 483 YSSLVDGLCKSGKLE 497
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 6/325 (1%)
Query: 6 KQPEKAHELFQAMV-DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP--DCQPD 62
++PE+A + + M D G + ++ +L +SG K + ++H + T C D
Sbjct: 108 REPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSG---KVLAAMDHFETTTTNGCTID 164
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY+ ++ K AL+ ++ G P TYN L++ + E L
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K++ C PDV T + G + K +++ G+ + L+ +AG
Sbjct: 225 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ S+V + M +VT + +ID +AG + +F+ M + + P+ V
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ A K + +L + + DT+ +N L+D + + + M +
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
GCKPD TY +V + G + A
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAA 429
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 135/326 (41%), Gaps = 12/326 (3%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ +++ L++ Y + ++AF+++ M+ P + T+++++ K+
Sbjct: 93 DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+T G + TY ++D + K + + K+ + C P + T N L
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
G+++ K G P + T+ L+D GK + + + M V
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y +I +AG + Q +++ M S+ P VTL +++ AG+ + + ++
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332
Query: 266 NSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + V ++ L+ ++ C EM L M++ C PD +TY ++ +G
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEM---LAQMKKAFCTPDTITYNILIDGLCKSG 389
Query: 323 MKNHAKEFQDLVEKMDETCLAMKRPD 348
A+ F D E ++ C +PD
Sbjct: 390 DVEAARAFFD--EMLEAGC----KPD 409
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ + A E+ M C +T ++ L+ +SG + A + + M C+P
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA-GCKP 408
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+IL+ KA D + DMS+ PN VTY TLI + + + L
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYF 468
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M C PD + + + SG+++ +++ + +G+ S T L+ KA
Sbjct: 469 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKA 527
Query: 182 GHFEKMSAVMEYMQK------YHYSWTIVT 205
++ ++ ++K Y Y+ I T
Sbjct: 528 NRVDEAVSLFNAIRKEGMPHPYAYNSIIST 557
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 48/272 (17%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ---- 148
G + + T N L+D + R K E L L+ PDV T N + + + +
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 149 ---IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG-------HFEKMS---------- 188
I ME+ Y G+ PS+ T N++L K+G HFE +
Sbjct: 114 FAVIREMEEDY------GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHT 167
Query: 189 ------------------AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
A+ME + + TI TYN +++ + G L++ L R +
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227
Query: 231 SERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA 290
P VT SL+ G + + + + + ++LDTV + L+ +
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287
Query: 291 EMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ V + M +GC PD VT TM+ G
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 319
>gi|326492636|dbj|BAJ90174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 631
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 149/314 (47%), Gaps = 20/314 (6%)
Query: 41 GLFD-----KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
GL D +A L H+ + +P + TY+ L+ + AF+ + +LL+ M G+R
Sbjct: 73 GLIDAKKPHQAQDLFGHLADE-GHRPSLVTYTTLLTAVTNQRAFEAIPSLLAGMDAAGLR 131
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE--DCEPDVWTMNCTLRAFGNSGQIDTME 153
P+ + +N LI+++ A E T KM C P + T N ++ FG +G+ D +
Sbjct: 132 PDAIFFNALINSFVEAGRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDESQ 191
Query: 154 KCYEKFQ-----------SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ ++ ++ ++P++ T+NIL+ ++ E+ V+ M+
Sbjct: 192 RIFDMMAGGDGDGDRDRVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPD 251
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
+VTYN V A+ + + + E L M R++ S T +V Y G+ E+ +R
Sbjct: 252 VVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVR 311
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ ++ ++ + + FN L+ + A VL +M+ G KPD VTY + A+S+ G
Sbjct: 312 QMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLG 371
Query: 323 -MKNHAKEFQDLVE 335
M +K F +VE
Sbjct: 372 HMAKCSKVFDKMVE 385
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 10/325 (3%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN----------TPDCQPDVNTYSILIK 71
GC +F L+ +G +G D++ + + M +P++ TY+IL+K
Sbjct: 166 GCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAGGDGDGDRDRVASTVRPNLTTYNILVK 225
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+ ++ ++ M +G+ P+ VTYNT+ AY + E +V+M+
Sbjct: 226 AWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARLRT 285
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
T + + G+++ +C + + AG+ P++ FN LL + A V+
Sbjct: 286 SERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVL 345
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+ + IVTY+ ++AF G + + +F M I+P L + + A
Sbjct: 346 GLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRA 405
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
+P K +L + + + V F ++ + + V M+ G +P+ T+
Sbjct: 406 QQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTF 465
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEK 336
T++ YS A+E ++++
Sbjct: 466 ETLIWGYSEQKQPWKAEEVLQMMQE 490
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G + + ++ + SAY ++ +A L+ M + T+ I
Sbjct: 234 EEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRA-RLRTSERTWGI 292
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + ++ + M G+ PN + +NTL+ + A A + L M
Sbjct: 293 IVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFG 352
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L AF + G + K ++K AGI+P ++IL + +A K
Sbjct: 353 IKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAE 412
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M + +VT+ VI + D+ ++R MR ++P+ T +L+ Y
Sbjct: 413 ELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGY 472
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + + I ++ + DA+
Sbjct: 473 SEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAW 507
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 145/348 (41%), Gaps = 55/348 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A F M GC AN ++TALL AY ++ +A + M + C P+ TYS
Sbjct: 340 EQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA-GCPPNTITYSA 398
Query: 69 LIKSCLKAFAFDKVQALLSDM----------------STQGIRPNTVTYNTLIDAYGRAK 112
L+ KA K + + + T I PN VTY LID +A
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
+ + L MLS CEP+ + + F G+ID ++ + + G P+++T+
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYT 518
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D+ K + V+ M + + +VTY +ID R G+ ++ L +M +
Sbjct: 519 SLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK 578
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +L+ G +GK +D S L+ F +
Sbjct: 579 GCSPNVVTYTALIDGLGKSGK----------VDLS------------------LQLFIQ- 609
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
M +GC P+ VTYR ++ G+ + A L+ +M +T
Sbjct: 610 ------MSTKGCAPNYVTYRVLINHCCAAGLLDEA---HSLLSEMKQT 648
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 143/343 (41%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM---------- 53
K KQ +A ++F M+D GC NT +++AL+ ++G KA + +
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSD 429
Query: 54 -----KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
K+T P+V TY LI KA Q LL M + G PN + Y+ LID +
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ + ++M P V T + A ++D K + + P++
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNV 549
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ ++D + G +K ++ M++ S +VTY +ID G++G + LF
Sbjct: 550 VTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQ 609
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M ++ P+ VT L+ AG ++ S+L + + + +V + K
Sbjct: 610 MSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS--KK 667
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE ++ G P Y ++ +S G A E
Sbjct: 668 FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELH 710
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 143/345 (41%), Gaps = 23/345 (6%)
Query: 11 AHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A ++++ M+ C NT +F L G+ FD AF +++ M PD +TYS
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGK---FDMAFQIIKVMMGK-GFVPDTSTYS 292
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +A +K L +M + G+ P+ TY LID++ +A + + +M S
Sbjct: 293 KVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSI 352
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C +V T L A+ + Q+ + + AG P+ T++ L+D KAG +K
Sbjct: 353 GCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKA 412
Query: 188 SAVME-------------YMQKYH---YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
V Y + H + +VTY +ID +A + + L M S
Sbjct: 413 CEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLS 472
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+P+ + +L+ + GK + V + + + L+DA + +
Sbjct: 473 NGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 532
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
VL M + C P+ VTY M+ G A + ++E+
Sbjct: 533 AMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ MV+ C N ++TA++ R G KA LL M+ C P+V TY+ LI
Sbjct: 533 AMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK-GCSPNVVTYTALI 591
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ D L MST+G PN VTY LI+ A + E +L+ + +
Sbjct: 592 DGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH-SLLSEMKQTYW 650
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P C++ G S + E+ +S G P + +L+D++ KAG E+ +
Sbjct: 651 PKYLQGYCSVVQ-GFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709
Query: 191 MEYMQKYHYSWTIVT---YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + S I + Y +I A A L++ L+ + + + P L++
Sbjct: 710 HKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKG 769
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 119/335 (35%), Gaps = 45/335 (13%)
Query: 36 AYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
A + G + A ++E D + D + +I ++A FD+ + L M
Sbjct: 84 ALCKEGRWSDALVMIER----EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCI 139
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN VTY TL+ + + K + + M+ E C P+ N + ++ N+ K
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKA---------------------------------- 181
++ G P +NI + S
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259
Query: 182 -------GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
G F+ +++ M + TY+ VI A +++ LF+ M+S +
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P T L+ ++ AG E+ S + + + V + L+ AY + K +
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASD 379
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ M GC P+ +TY +V G A E
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + + +LF M +GC N ++ L++ +GL D+A SLL MK T P
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY--WP 651
Query: 62 D-VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE---- 116
+ Y +++ K F LL ++ + G P Y LID + +A E
Sbjct: 652 KYLQGYCSVVQGFSKKFIAS--LGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709
Query: 117 ----MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
MEL+ ++ D++T ++A + Q++ + Y + G+ P ++ F
Sbjct: 710 HKEMMELSSSLNITSK---DMYTS--LIQALCLASQLEKAFELYSEITRKGVVPELSVFV 764
Query: 173 ILLDSYGKAGHFEK 186
L+ K + +
Sbjct: 765 CLIKGLIKVNKWNE 778
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 9/341 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M N ++ Y G F +A L + +K D+ +SI
Sbjct: 591 ESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLK-CSGIALDMVAFSI 649
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+++ +KA + ++L+ M Q I P+ Y ++ Y + M ++++ K+L
Sbjct: 650 VVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKS 709
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+ + D NC + + + + + + + G P+ TFN++LD YGKA F K
Sbjct: 710 EVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKA 769
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ +M + +++YN VI A+G D K M R M+ + S ++
Sbjct: 770 KELF-WMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDG 828
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
YG G+ E +VL+ + S D +N +++ YG E+ GVL +++ G +PD
Sbjct: 829 YGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPD 888
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+Y T+++AY GM A DLV++M E + PD
Sbjct: 889 LCSYNTLIKAYGVAGMVEDAI---DLVKEMRENGI---EPD 923
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 148/347 (42%), Gaps = 71/347 (20%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV------ 63
+A +L+Q + G + +F+ ++ Y ++G A S+L M+ + PD+
Sbjct: 627 EAEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDM 686
Query: 64 -----------------------------NTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
Y+ +I C +A ++ L S+M +G
Sbjct: 687 LRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGF 746
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
PNT+T+N ++D YG+AK+F + + L M + DV + N + A+G++ M
Sbjct: 747 SPNTITFNVMLDVYGKAKLFNKAK-ELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMAS 805
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Q G S+ +N +LD YGK G E V++ M++ Y+ TYNI+I+ +G
Sbjct: 806 AVRNMQFDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYG 865
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
G + ++ + +R ++P + +L++AYG AG E D D++ +
Sbjct: 866 EQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVE---------DAIDLVKE-- 914
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
M++ G +PDK+TY ++ A N
Sbjct: 915 ------------------------MRENGIEPDKITYSNLITALQKN 937
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 118/281 (41%), Gaps = 17/281 (6%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEM 117
C + ++++K + + DK M G + N YN ++ GR + +
Sbjct: 185 CNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYNVILRVLGRREDWGTA 244
Query: 118 ELTLVKMLSE-----DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
E +M+ E E D N + A G + K + G+QP+I TF
Sbjct: 245 E----RMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFG 300
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDLKQMEYLFRLM 229
+L+ Y K + E+ V M+ S+ I+ Y+ +I + R + E + LM
Sbjct: 301 MLMGLYQKGWNVEEAEFVFSKMR----SFGIICQSAYSAMITIYTRLSLYNKAEEIIGLM 356
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
+++ + L+ AY G+ E+ VL + + + V FN L+ YG+L
Sbjct: 357 GEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNM 416
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
A + + +Q G +PD+ TYR+M+ + G A+ +
Sbjct: 417 AAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWY 457
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 153/365 (41%), Gaps = 40/365 (10%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA------FSLLEHMKNT 56
GK A LF + + G + + ++ +++ +GR+G + +A L +M N+
Sbjct: 411 GKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYMPNS 470
Query: 57 PDCQPDVN-----------------------TYSILIKSCLKAFA----FDKVQALLSDM 89
+ +N +S ++ + LKA+ +KV LL D
Sbjct: 471 SNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPLLLKDS 530
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTL--VKMLSEDCEPDVW-TMNCTLRAFGNS 146
Q + N + + L+ Y + + E L K + E +++ + C+ + GN
Sbjct: 531 FYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDNLYHLLICSCKELGN- 589
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+++ + Y + + +P+++ ++D Y G F + + + ++ + +V +
Sbjct: 590 --LESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKCSGIALDMVAF 647
Query: 207 NIVIDAFGRAGDLKQM-EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+IV+ + +AG LK L + + E I P ++R Y G KL + I
Sbjct: 648 SIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKIL 707
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
S++ D +NC+++ R E+ + M QRG P+ +T+ M+ Y + N
Sbjct: 708 KSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFN 767
Query: 326 HAKEF 330
AKE
Sbjct: 768 KAKEL 772
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 151/359 (42%), Gaps = 42/359 (11%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E+ M ++ N +++ LL+AY + G ++A +L M+ P++ ++ L
Sbjct: 348 KAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEAS-FSPNIVAFNTL 406
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL---------- 119
I K Q L D+ G+ P+ TY ++I+ +GR + E E
Sbjct: 407 ITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGY 466
Query: 120 --------TLVKMLS--EDCEPDVWTMNCTLR-AFGNSGQIDTMEKCYEKFQSAGIQPSI 168
TL+ + + +D E + T++ L+ +S + T+ K YEK P +
Sbjct: 467 MPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPLL 526
Query: 169 -------------NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ +IL+ +Y K ++ V+ + ++ Y+++I +
Sbjct: 527 LKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDNLYHLLICSCKE 586
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG---KPEKLGSVLRFIDNSDIMLD 272
G+L+ ++ M KP+ C+++ Y G + EKL L+ S I LD
Sbjct: 587 LGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKC---SGIALD 643
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQ-QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V F+ +V Y + + VL M+ Q PD YR M+R Y GM + K+
Sbjct: 644 MVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDL 702
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 123/287 (42%), Gaps = 34/287 (11%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKSC 73
F+ M++ G N +F L+ Y + ++A + M++ CQ + YS +I
Sbjct: 284 FRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQ---SAYSAMITIY 340
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ ++K + ++ M + N + L++AY + E E LV+M P++
Sbjct: 341 TRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNI 400
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
N + +G + ++ + Q+AG++P T+ +++ +G+ G++++ +
Sbjct: 401 VAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKE 460
Query: 194 MQKYHYSWTIVTYNIVI-------DAFGRAGDLKQMEYLFRLMRSERIKPSC---VTLCS 243
+++ Y +I D G G L M +K C L +
Sbjct: 461 LKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDM-----------LKIGCQHSSILGT 509
Query: 244 LVRAYGHAGKPEKLGSVLR-------FIDNS--DIMLDTVFFNCLVD 281
L++AY AG+ K+ +L+ ++ + I++ T NCLVD
Sbjct: 510 LLKAYEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVD 556
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/294 (16%), Positives = 124/294 (42%), Gaps = 2/294 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C+ + + +L R DK+ E M+N + ++N Y+++++ + +
Sbjct: 185 CNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYNVILRVLGRREDWGTA 244
Query: 83 QALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ ++ ++S G + +NTLI A R ML +P++ T +
Sbjct: 245 ERMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMG 304
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+ ++ E + K +S GI + ++ ++ Y + + K ++ M + +
Sbjct: 305 LYQKGWNVEEAEFVFSKMRSFGIICQ-SAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAM 363
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ + ++++A+ + G L++ E + M+ P+ V +L+ YG +
Sbjct: 364 NVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLF 423
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
I N+ + D + +++ +GR + E + + +++ G P+ T++
Sbjct: 424 LDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYMPNSSNLYTLI 477
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q E + Q M ++ ++ +++ YG G D+ +L ++ +PD
Sbjct: 830 GKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELREC-GLRPD 888
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
+ +Y+ LIK+ A + L+ +M GI P+ +TY+ LI A + + E
Sbjct: 889 LCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKYLE 942
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++ +K K + + L +M +G++P+ VT++T+I + ++ KM
Sbjct: 182 YNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMP 241
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
S DC PD T + + A+G +G +D Y++ ++ + TF+ ++ +G AG+++
Sbjct: 242 SFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYD 301
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
V E M+ +V YN ++DA GRA Q++ +++ M PS T SL+
Sbjct: 302 GCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLL 361
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG-C 304
RAYG A E V + + + L+ + +N L+ + E + + M+ G C
Sbjct: 362 RAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTC 421
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVE 335
PD T+ +M+ YS G + A+E D+VE
Sbjct: 422 SPDSWTFSSMITIYSCGGKVSEAEEMLNDMVE 453
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C P KA E F+ M C+ + +++ ++ AYGR+G D AFSL + + T + + D
Sbjct: 227 CSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRAR-TENWRIDPA 285
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
T+S +IK A +D + +M GI+PN V YN L+DA GRAK +++ +M
Sbjct: 286 TFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEM 345
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ P T LRA+G + + Y++ + G+Q ++ +N LL G+
Sbjct: 346 IKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYV 405
Query: 185 EKMSAVMEYMQKYHY----SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + M+ SWT ++ +I + G + + E + M P+
Sbjct: 406 NEAVEIFQDMKSSGTCSPDSWT---FSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFV 462
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
L SL++ YG A + + + + + D F CL++
Sbjct: 463 LTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNV 504
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC+ E A +LF+ M++ G + +F+ ++S L KA E M + DC PD
Sbjct: 191 KCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSF-DCNPDD 249
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TYS +I + +A D +L T+ R + T++T+I +G A + +
Sbjct: 250 VTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEE 309
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + +P++ NC L A G + + ++ Y++ G PS T+ LL +YG+A +
Sbjct: 310 MKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARY 369
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCVTLC 242
E V + M++ ++ YN ++ G + + +F+ M+S P T
Sbjct: 370 GEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFS 429
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
S++ Y GK + +L + + + L+ YG+ K ++ + +
Sbjct: 430 SMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIEL 489
Query: 303 GCKPD 307
G PD
Sbjct: 490 GLTPD 494
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+ K+P + +++ M+ G + ++ +LL AYGR+ + A + + MK Q
Sbjct: 329 MGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEK-GLQL 387
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI-RPNTVTYNTLIDAYGRAKMFAEMELT 120
+V Y+ L+ C ++ + DM + G P++ T++++I Y +E E
Sbjct: 388 NVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEM 447
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
L M+ +P+++ + ++ +G + ++D + + + + G+ P
Sbjct: 448 LNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTP 493
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + E A +++ M ++G N + LL+ G ++A + + MK++ C PD
Sbjct: 365 GRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPD 424
Query: 63 VNTYS--ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
T+S I I SC + + +L+DM G PN +LI YG+AK ++ T
Sbjct: 425 SWTFSSMITIYSC--GGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRT 482
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNS--GQIDTMEKCYEKFQSAGIQPSIN-TFNILLDS 177
+++ PD C L + G++ + C + P + +LL
Sbjct: 483 FNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVR-----ANPKLGFVVELLLGE 537
Query: 178 YGKAGHF 184
K G+F
Sbjct: 538 QDKEGNF 544
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+ YN+ + F + D++ E LF M + +KP VT +++ P K
Sbjct: 180 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 239
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + D D V ++ ++DAYGR + + + + D T+ TM++ + G
Sbjct: 240 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAG 298
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 10/341 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ + A+E+F M +GC N S+T L+ +G ++A L M +
Sbjct: 236 ILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-N 294
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
C P V TY++LI + + + KV+AL ++M +G PN TY LID + E
Sbjct: 295 CCPTVRTYTVLIYAL--SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L +M + P V T N + + G ID + + +S P+ T+N L+
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
K K A++ M + S +++TYN +I + DL+ L LM + P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
T + G+ E+ G++ + + + V + L+D Y ++ +L
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
E M C P+ TY ++ + KE LV KM
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCK---EKKMKEASSLVAKM 570
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 146/365 (40%), Gaps = 39/365 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M ++ C +++T L+ A SG +A +L MK C+P+V+TY++L
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVL 340
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGI----------------------------------- 94
I K D+ + +LS+MS +G+
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
PNT TYN LI + + + L KML P + T N + +++ +
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
G+ P T+++ +D+ K G E+ + + ++ V Y +ID +
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G + L M ++ P+ T L+ K ++ S++ + + V
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ L+ + F V M G +PD TY + AY + GM +E D++
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM---LEEVDDVI 637
Query: 335 EKMDE 339
KM+E
Sbjct: 638 AKMNE 642
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 39/331 (11%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + KA L M++ + ++ +L+ + + A+ LL M N
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM-NENGLV 471
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS+ I + K ++ L + +G++ N V Y LID Y +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML++ C P+ +T N + ++ K + G++P++ T+ IL+ K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F+ V +M Y + TY + A+ G L++++ + M E I P VT
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y +LG R D F C+VD
Sbjct: 652 YTVLIDGYA------RLGLTHRAFD---------FLKCMVDT------------------ 678
Query: 301 QRGCKPDKVTYRTMVRAYS-TNGMKNHAKEF 330
GCKP +++ S N MK E
Sbjct: 679 --GCKPSLYIVSILIKNLSHENRMKETRSEI 707
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 141/342 (41%), Gaps = 18/342 (5%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G+CK E A+ L M + G + +++ + + G ++A +L + +K +
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK-AKGVK 506
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y+ LI K D +LL M PN+ TYN LI+ + K E
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ KML+ +P V T + G D K + S G QP + T+ L +Y
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E++ V+ M + +VTY ++ID + R G + + M KPS
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF-FNC--LVDAYGRLKCFAEMKGVLE 297
+ L++ H + ++ S+I +D+V N + D + L+ +K + E
Sbjct: 687 VSILIKNLSHENRMKE--------TRSEIGIDSVSNVNSVDIADVWKTLEYEIALK-LFE 737
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
M + GC D Y ++ + + +E Q LV M E
Sbjct: 738 KMVEHGCTIDVSIYGALIAGFCQ---QERLEEAQGLVHHMKE 776
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 1/322 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
++ +++ N +F A+++ Y + G +A L PD TY+ LI
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGH 239
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D + M +G + N V+Y LI A E M ++C P V
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + A SG+ + + + G +P+++T+ +L+D K ++ ++
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + ++VTYN +ID + + G + + LM S P+ T L+ K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
K ++L + + + +N L+ ++ +L +M + G PD+ TY
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 314 MVRAYSTNGMKNHAKEFQDLVE 335
+ G A D V+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVK 501
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 145/350 (41%), Gaps = 23/350 (6%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + +A L M+ G ++T L+ + G FD A + HM + Q
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL-GYQ 611
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV TY+ + + ++V +++ M+ +GI P+ VTY LID Y R +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M+ C+P ++ ++ ++ + ++ E GI N ++ + K
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMK------ETRSEIGIDSVSNVNSVDIADVWK 725
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+E + E M ++ + + Y +I F + L++ + L M+ + PS
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG------ 294
SL+ KLG + D M++ L+++Y L C ++G
Sbjct: 786 YNSLLDCCC------KLGVYAEAVRLVDAMVENGLLP-LLESYKLLVCGLYIEGSNEKAK 838
Query: 295 -VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
V + G D+V ++ ++ + + E D++E+ D T A
Sbjct: 839 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQA 888
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 110/256 (42%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P + Y+ ++ S K D+++ + ++ I PN T+N +++ Y + E EL
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
K++ PD +T + + +D + + G Q + ++ L+
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+AG + + M + + T+ TY ++I A +G + LF M+ + +P+
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ K ++ +L + ++ V +N L+D Y + + +L++M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 300 QQRGCKPDKVTYRTMV 315
+ C P+ TY ++
Sbjct: 396 ESNSCGPNTRTYNELI 411
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
F KM+A E+ + T+ YN ++ + + + +M+ ++ + + +I P+ T +
Sbjct: 144 FRKMNADGEF----KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V Y G + I + + DT + L+ + R K V +M Q+G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEKMDETC 341
C+ ++V+Y ++ G N A K F D+ E D C
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTE--DNCC 296
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 143/321 (44%), Gaps = 1/321 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ ++A L + + GC ++ ALL+ + G ++A LL + + C P
Sbjct: 44 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTP 102
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TY+ LI K + L +M+++G+ +TV Y LI +A +
Sbjct: 103 DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY 162
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M S+ C PDV T++ + +G+I + ++ ++ G+ P+ ++ L+ KA
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ ++ M+K + +TYNI+ID ++GD+ F M KP T
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ + AG + V + +S + V + L+ + + + + M++
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
RGC PD Y ++V +G
Sbjct: 343 RGCPPDSFVYSSLVDGLCKSG 363
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 19/335 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK K+ +A++LF+ M G +T +TAL+ ++G +A S+ + M + C P
Sbjct: 114 LGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM-TSQGCVP 172
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELT 120
DV T S +I KA + M +G+ PN V Y+ LI +A KM +E+
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM- 231
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M C PD T N + SG + +++ AG +P + T+NIL+ + K
Sbjct: 232 LAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCK 291
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ + V + M S +VTY +I + L + ++ M+ P
Sbjct: 292 AGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFV 351
Query: 241 LCSLVRAYGHAGKPEKLGSVLRF-------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
SLV +GK E G + F + NS +F C + E
Sbjct: 352 YSSLVDGLCKSGKLE--GGCMLFDEMERSGVANSQTRTRLIFHLCKANR------VDEAV 403
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ +++ G P Y +++ A +G N +
Sbjct: 404 SLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQ 437
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 1/299 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+F+ L++ ++G+ +A SL + T C D++TY+ ++ K + AL+
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQE-TTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEK 59
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
++ G P TYN L++ + E L K++ C PDV T + G +
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
K +++ S G+ + L+ +AG + S+V + M +VT +
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID +AG + +F+ M + + P+ V +L+ A K + +L + +
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
DT+ +N L+D + A + + M + GCKPD TY ++ + G + A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 12/287 (4%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
T+SILI +KA + +L + +T G + TY T++D + K E + K+
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ C P + T N L G+++ K G P + T+ L+D GK
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + + M + V Y +I +AG + Q +++ M S+ P VTL ++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQ 301
+ AG+ + + ++ + + V ++ L+ ++ C EM L M++
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM---LAQMKK 237
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C PD +TY ++ +G A+ F D E ++ C +PD
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFD--EMLEAGC----KPD 278
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 12/342 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K +A +LF M+ +G + +++AL+S + G + A L M + +PDV
Sbjct: 237 KVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI-LENIKPDV 295
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T++IL+ + K + + + M QGI+PN VTYN+L+D Y K + +
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD+ + + + F + D +++ I P + T++ L+D K+G
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ M TI TYN ++DA + + + L ++ + I+P+ T
Sbjct: 416 ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 244 LVRAYGHAGKPEKLGSVLR--FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L++ +GK E V + ++ +DT + ++ + F E +L M+
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDT--YTIMIQGFCVEGLFNEALALLSKMED 533
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
GC PD TY ++ + K+ D+ EK+ +A
Sbjct: 534 NGCIPDAKTYEIIILSL-------FKKDENDMAEKLLREMIA 568
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 150/351 (42%), Gaps = 36/351 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K L Q M G N + L++ + + GL AFS+ + P
Sbjct: 95 LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM-GYVP 153
Query: 62 DVNTYSILIKS-CLK-----AFAF-DKVQAL----------------------------L 86
D T++ LIK CLK AF F DKV AL L
Sbjct: 154 DTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLL 213
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ ++PN V YNT+ID+ + K+ E +M+S+ PDV T + + F
Sbjct: 214 QRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCIL 273
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+++ + K I+P + TFNIL++++ K G ++ V + M K VTY
Sbjct: 274 GKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N ++D + ++ + + +F M + P + ++ + K ++ ++ + +
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+I+ D V ++ L+D + + +++ M RG P TY +++ A
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 128/330 (38%), Gaps = 40/330 (12%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
N S+++ + + + D A SL + +NT P ++ ++ S +K+ + V
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNT---TPPAFEFNKILGSLVKSKHYHTVL 105
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
L M +GI+PN V N LI+ + + + K+L PD T ++
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGL 165
Query: 144 GNSGQIDTMEKCYEKFQSAG-----------------------------------IQPSI 168
GQI ++K + G +QP++
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+N ++DS K + + M S +VTY+ +I F G L LF
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M E IKP T LV A+ GK ++ +V + I + V +N L+D Y +K
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ K + M Q G PD +Y M+ +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +L M D G +++ ++L A + DKA +LL +K+ QP
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK-GIQP 468
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ TYSILIK ++ + + + + +G N TY +I + +F E L
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
KM C PD T + + + D EK + + G++P
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++F+ ++ +G + N ++T ++ + GLF++A +LL M++ C PD TY I
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDN-GCIPDAKTYEI 545
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
+I S K D + LL +M +G+RP +
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRPRQI 576
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 6/226 (2%)
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++L + P + N L + S T+ +K + GI+P++ NIL++ + + G
Sbjct: 75 RLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLG 134
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+V + K Y +T+ +I G ++Q + + ++
Sbjct: 135 LIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYG 194
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ G+ +L+ +D + + + V +N ++D+ ++K E + M +
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
G PD VTY ++ + G N A DL KM L +PD
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDA---IDLFNKM---ILENIKPD 294
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 1/300 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q + +FQAM +G + +++ A++ +SG DKA+ +LE MK P
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMK-VKHVHP 628
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY ++ K D+ L + ++GI N + Y++LID +G+ E L L
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + P+V+T N + A + +ID C++ + P+ T++IL++ +
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ K + MQK +VTY +I + G++ LF ++ P +
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ +A +P + V L+ L+DA + +C + V V+ +
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSE 868
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 157/337 (46%), Gaps = 5/337 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-Q 60
L + +QPE+A EL + M D G + + FT L+ A R G + A +L++ +K + C +
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS--CLE 243
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y++ I KA + D ++ G+RP+ V+Y +++ +A E E
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M +E P + N + +G++ + D K E+ + G PS+ +FN +L GK
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK 363
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ + + M+K I TYNI+ID AG + + + M + P+ ++
Sbjct: 364 KRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ +V A + E+ + ++V + L+D G+ + + E M
Sbjct: 423 VNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G + + Y +++R + +G K K +++++ +
Sbjct: 483 DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 3/315 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQ 60
L K Q E+AH +F++ + GC+ N+ ++ +L+ G+ G D A+ L E M + D
Sbjct: 430 LCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + Y+ LI++ + + +M +G RP+ NT +D +A +
Sbjct: 490 PII--YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M S PDV + + + +GQ ++ G +N ++D K
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G +K V+E M+ H T+ TY ++D + L + LF +S+ I+ + +
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL 667
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
SL+ +G G+ ++ +L + + + +N L+DA + + E + M+
Sbjct: 668 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK 727
Query: 301 QRGCKPDKVTYRTMV 315
+ C P+ TY ++
Sbjct: 728 EMKCSPNTYTYSILI 742
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 165/385 (42%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G ++ + A++L + + + GC + SF ++L+ G+ D+A +L + MK D +P+
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK--DAKPN 384
Query: 63 VNTYSILIKS-CL----------------------------------KAFAFDKVQALLS 87
++TY+I+I C+ KA ++ +
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRA-------KMFAEM-----------ELTLVK------ 123
S +G PN+VTY +LID G+ ++F +M +L++
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504
Query: 124 -----------MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
M+ PD+ +N + +G+++ +E +S G P + +++
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
IL+ KAG + S + + M + ++ YN V+D ++G + + + M+ +
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+ P+ T S+V + ++ + + I L+ + ++ L+D +G++ E
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
+LE M ++G P+ T+ +++ A
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDA 709
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 146/354 (41%), Gaps = 36/354 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY--------------------GR-- 39
LGK + + A+ LF+ M+D G DAN +T+L+ + GR
Sbjct: 465 LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524
Query: 40 -------------SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+G +K ++ E MK+ PDV +YSILI KA + +
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSF-GFLPDVRSYSILIHGLTKAGQARETSNIF 583
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
MS QG + YN ++D ++ + L +M + P V T +
Sbjct: 584 QAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKI 643
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
++D +E+ +S GI+ ++ ++ L+D +GK G ++ ++E M K + + T+
Sbjct: 644 DRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 703
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N ++DA + ++ + F+ M+ + P+ T L+ K K + +
Sbjct: 704 NSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 763
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
++ + V + ++ ++ + + E + G PD ++ ++ S
Sbjct: 764 QGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSN 817
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 129/303 (42%), Gaps = 3/303 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + EK +F+ M G + +S++ L+ ++G + ++ + M D
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ-GFALDA 595
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ ++ K+ DK +L +M + + P TY +++D + E + +
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
S+ E +V + + FG G+ID E+ G+ P++ T+N L+D+ K
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ + M++ S TY+I+I+ R + ++ M+ + + P+ VT +
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775
Query: 244 LVRAYGHAGKPEKLGSVL-RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
++ G S+ RF N I D+ FN L++ E V E + R
Sbjct: 776 MISGLAKVGNITDAYSLFERFKTNGGIP-DSASFNALIEGMSNANRPMEAYQVFEETRLR 834
Query: 303 GCK 305
GC+
Sbjct: 835 GCR 837
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 142/343 (41%), Gaps = 42/343 (12%)
Query: 31 TALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
AL++ RS + AF ++ M++ +P + Y++LI + +A ++ LL M
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHL-KFRPPFSAYTVLIGALAEARQPERALELLRQMQ 203
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFGNSGQI 149
G + + TL+ A R E L LV + C EPD+ N + FG +G +
Sbjct: 204 DVGYEVSVPLFTTLVRALAREGQM-EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262
Query: 150 DTMEKCYEKFQSAGIQPS-----------------------------------INTFNIL 174
D K + + ++ G++P +N +
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ YG A F+ ++E +++ ++V++N ++ G+ + + LF +M+ +
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-A 381
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP+ T ++ AG+ + + ++ + + + + N +VD + E
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ E +RGC P+ VTY +++ G + A L EKM
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR---LFEKM 481
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 106/258 (41%), Gaps = 6/258 (2%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
++ +L +MS G L+ R++ + + M P +
Sbjct: 125 LEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIG 184
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A + Q + + + Q G + S+ F L+ + + G E A+++ ++
Sbjct: 185 ALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP 244
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
IV YN+ ID FG+AG + F +++ ++P V+ S+V AG +LG
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAG---RLGEAE 301
Query: 262 RFIDNSDIMLDT---VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D +N ++ YG + F + +LE +++RGC P V++ +++
Sbjct: 302 ELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL 361
Query: 319 STNGMKNHAKEFQDLVEK 336
+ A D+++K
Sbjct: 362 GKKRKVDEALTLFDVMKK 379
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 5/337 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M +EG N +T +L+ + +K S +K P TY
Sbjct: 139 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLK-ACGLSPTAATYGC 197
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K KA K +L +M G+ PN + Y ++D Y R F M+S
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ N + AF +G++D E ++ + P+I T+ +LD Y K G+ +K
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 317
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V + ++ +V+YN ++ +A ++ + M + + P+ + +L Y
Sbjct: 318 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGY 377
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AG EK + + + ++ +D V + L+ A + V + + G K ++
Sbjct: 378 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNR 437
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEK----MDETC 341
+TY TM+ ++ G + A++ + ++K +D C
Sbjct: 438 ITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTIC 474
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 143/318 (44%), Gaps = 1/318 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ K KA ++ + M G N + ++ Y R G F AF + E M + +
Sbjct: 201 LFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV-SAGLK 259
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y+IL+ + KA DK +L ++ + P TY +++D Y + +
Sbjct: 260 PDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEV 319
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ + P V + N L + Q++ + + G+ P+ ++ L + Y +
Sbjct: 320 FDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYAR 379
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG EK + + M+K + + IV Y ++ A ++G +++ +F+ + +K + +T
Sbjct: 380 AGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRIT 439
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
C+++ + G+ K +L + LDT+ + + A R E+ L VM+
Sbjct: 440 YCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMR 499
Query: 301 QRGCKPDKVTYRTMVRAY 318
++ + + TY T++ +
Sbjct: 500 EKKLEVNARTYTTLIHGW 517
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++T++L Y + G KA + + +K T +P V +Y+ L+ KA + + +L+
Sbjct: 298 ETYTSILDGYVKGGNIQKALEVFDRIK-TAGLRPGVVSYNSLLSGLAKARQMENARLMLN 356
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M G+ PN +Y L + Y RA + +M E+ D+ L+A SG
Sbjct: 357 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 416
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + +++ AG++ + T+ +LD + + G K ++ MQK+ + + Y
Sbjct: 417 AMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYT 476
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I A R+GD +++ +MR ++++ + T +L+ + A P++ S S
Sbjct: 477 SFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKAS 536
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ LD+ NCL+ G + C ++ + E +Q
Sbjct: 537 GLQLDSALSNCLLS--GLISCASQNSTLGEKIQ 567
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 11/276 (3%)
Query: 63 VNTYSILIKSCLKAFAF---------DKV--QALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
VN + ++ K L+ + DKV +A M I+PN Y +LI AY A
Sbjct: 6 VNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEA 65
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+ +MLS+ + + + + ++G + E +EKF++ + P +
Sbjct: 66 RDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVY 125
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N ++ +Y +AG+ E + A++ M++ + + Y V++ F D ++ F +++
Sbjct: 126 NSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA 185
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ P+ T +V+ + AG K +L +D + + + + ++D Y R F
Sbjct: 186 CGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTA 245
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
V E M G KPD V Y +V A+ G + A
Sbjct: 246 AFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 136/308 (44%), Gaps = 7/308 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A F+AM N +T+L+ AY + + A + E M + Q + + +I
Sbjct: 36 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML-SQGIQLNEAVFCSII 94
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
A + + + + P + YN+++ AY +A +E L +M E +
Sbjct: 95 SGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQ 154
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKC---YEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
++ L F +I EKC + + ++ G+ P+ T+ ++ + KAG+ K
Sbjct: 155 GNLGLYTTVLNGF---AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKA 211
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++E M K+ S + Y +++D + R GD ++ M S +KP V LV A
Sbjct: 212 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHA 271
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ AG+ +K VL I+ + ++ + ++D Y + + V + ++ G +P
Sbjct: 272 FCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPG 331
Query: 308 KVTYRTMV 315
V+Y +++
Sbjct: 332 VVSYNSLL 339
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 7/320 (2%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+ + L+ Y R G A + E M+ +P+V+ Y+ LI + +A + A
Sbjct: 18 REYGLLVDFYARHGDKVAARATFEAMR-ASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M +QGI+ N + ++I Y A E K +E+ P N ++A+ +G
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++T+E + + G Q ++ + +L+ + + EK + ++ S T TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ F +AG++ + + M + P+ + ++ Y G V + ++
Sbjct: 197 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 256
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V +N LV A+ + + GVLE ++ P TY +++ Y G
Sbjct: 257 GLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG----- 311
Query: 328 KEFQDLVEKMDETCLAMKRP 347
Q +E D A RP
Sbjct: 312 -NIQKALEVFDRIKTAGLRP 330
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 1/312 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F + G T SF L++ +S D+ F L + M+ PDV TYS+LI
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN-RIYPDVFTYSVLI 300
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D + L +M +G+RPN +T+ LID R++ T +ML+ +
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N L G ++ K ++ + G++P T+ L+D Y K G E +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + V + +I F R G ++ E R M +KP T ++ Y
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G + +L+ + + + +N L++ + +LE M G PD +T
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540
Query: 311 YRTMVRAYSTNG 322
Y ++ + NG
Sbjct: 541 YNILLEGHCKNG 552
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A +LF M G N +FTAL+ RS D A + M T +
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML-TMGVK 360
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMEL 119
PD+ Y+ L+ K +K + L+ +M G++P+ +TY TLID Y + + + ME+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M E D + F G++ E+ + AG++P T+ +++D Y
Sbjct: 421 R-KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC 479
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G+ + +++ MQ + ++TYN++++ + G +K L M + + P +
Sbjct: 480 KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDI 539
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
T L+ + GK E L L+ + +++D ++ LV Y +
Sbjct: 540 TYNILLEGHCKNGKAEDL---LKLRNEKGLIVDYAYYTSLVSEYNK 582
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 135/353 (38%), Gaps = 37/353 (10%)
Query: 6 KQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
K + A +F A++D G + F AL+ AY SG A ++N+ + Q +
Sbjct: 131 KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS-NFQIPFH 189
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ + + + + S++ G P YN LI+ + + + +L ++
Sbjct: 190 GCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P + N + S +D + + + I P + T+++L+ K G
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 185 EKMSAVMEYMQK-----------------------------YHYSWT------IVTYNIV 209
+ + + MQ+ YH T +V YN +
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTL 369
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++ + GD+ + L MR +KP +T +L+ Y G E + + ++ +
Sbjct: 370 LNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+LD V F L+ + R + + L M + G KPD TY ++ Y G
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
NS T+ Y + G P + +NIL++ + K G + ++K T V
Sbjct: 200 NSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV 259
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
++N +I+ ++ +L + L + M RI P T L+ G+ + + +
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ + + F L+D R + M G KPD V Y T++ G
Sbjct: 320 QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379
Query: 325 NHAKEFQDLVEKMDETCLAMKRPD 348
N A++ +DE + +PD
Sbjct: 380 NKARKL------VDEMRMVGMKPD 397
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 153/339 (45%), Gaps = 21/339 (6%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQ 60
CK+ ++A +L M D+GC + ++ +++ + G D A +E +KN P C+
Sbjct: 204 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCE 260
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ +Y+I++K A ++ + L+ +M +G PN VT+N LI R +
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 320
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ C P+ + N L AF ++D + S G P I ++N LL + +
Sbjct: 321 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 380
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G + ++ ++ + +++YN VID +AG K+ L M S+ ++P +T
Sbjct: 381 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 440
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV-------DAYGRLKCFAEMK 293
++ + E + + I +TV +N ++ + + + FA M
Sbjct: 441 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 500
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G GC P++ TY ++ + G+ A++ D
Sbjct: 501 G-------NGCMPNESTYTILIEGLAYEGLIKEARDLLD 532
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 15/309 (4%)
Query: 24 DANT-QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
DA T + LSA GR+ E + C PDV Y+ ++ A D
Sbjct: 95 DAGTCAALIKKLSASGRTA---------EARRVLAACGPDVMAYNAMVAGYCGAGQLDAA 145
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ L+++M + P+ TYNTLI GR + A L +ML C PDV T L
Sbjct: 146 RRLVAEMP---VEPDAYTYNTLIRGLCGRGRT-ANALAVLDEMLRRRCVPDVVTYTILLE 201
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A K ++ + G P I T+N++++ + G + ++ + Y
Sbjct: 202 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 261
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
V+YNIV+ A + E L M + P+ VT L+ G E VL
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 321
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
I +++ +N L+ A+ + K + L++M RGC PD V+Y T++ A +
Sbjct: 322 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 381
Query: 322 GMKNHAKEF 330
G + A E
Sbjct: 382 GEVDVAVEL 390
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 31/345 (8%)
Query: 3 GKC-KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G C K KA L M++ + ++ +L++ R+G D A+ LL MK P
Sbjct: 302 GLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKER-GLVP 360
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY I K+ ++ + L ++ +G+ N + Y+ LID Y + E
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KMLS++C P+ +T N + ++G + +++ G++P++ TFNIL+ K
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G F+ ++ M TYN I+ + AG +++ E + M+ E + P T
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSD--------IMLDTVFFN--CLVDAYGR-----L 286
SL++AYG G VL+ + ++D + L F+ +V+ G +
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600
Query: 287 KCFAEMKG--------------VLEVMQQRGCKPDKVTYRTMVRA 317
F ++ G + E M++ GC PD Y ++
Sbjct: 601 SNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISG 645
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 148/343 (43%), Gaps = 10/343 (2%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C K + A +F+ M + N S+ L+ +G D+A SL MK+
Sbjct: 234 ILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDC- 288
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P+V TY+ LIK + K LL +M + + P+ +TYN+LI RA
Sbjct: 289 CYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAY 347
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L M PD T C + S +++ + ++ G+ ++ +++L+D Y
Sbjct: 348 RLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGY 407
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G ++ + E M + S T+N +I AG+LK+ LF M +KP+
Sbjct: 408 CKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV 467
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T L+ G + L+ + +S +N ++ Y E + ++
Sbjct: 468 YTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQ 527
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
M++ G PD TY ++++AY G+ A F L D C
Sbjct: 528 MKEEGVPPDDFTYTSLIKAYGKLGLTYSA--FDVLKSMFDADC 568
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 2/308 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A LF M D+ C N ++TAL+ R + KA LL+ M + PD+ TY+
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNV-HKAMGLLDEMLER-NLVPDLITYNS 332
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +A D LLS M +G+ P+ TY ID ++ E + E
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+V + + + G++D +EK S P+ TFN L+ AG+ ++
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ + M K T+ T+NI+I + GD + M S KP T + + Y
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
AGK ++ ++ + + D + L+ AYG+L VL+ M C+P
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572
Query: 309 VTYRTMVR 316
T+ ++++
Sbjct: 573 HTFLSLIK 580
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 144/380 (37%), Gaps = 67/380 (17%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A LF+ M+ + C N +F AL+ +G +A SL + M +
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM-GLK 464
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V T++ILI LK FD L M + G +P TYN I+ Y A E E
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM 524
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL----- 175
+V+M E PD +T ++A+G G + + A +PS +TF L+
Sbjct: 525 MVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFD 584
Query: 176 -----DSYGKAG-------------------HFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ G+ G F+ + + E M+K+ + Y +I
Sbjct: 585 KRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLIS 644
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPS------CVTLCSLVRAYGHA-------------- 251
+ +L L M+ E I PS ++ C ++ YG A
Sbjct: 645 GICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704
Query: 252 ---------------GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
G+ E+ SV + + D + + L+D + E +
Sbjct: 705 QLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLF 764
Query: 297 EVMQQRGCKPDKVTYRTMVR 316
E M++ GC TY + +
Sbjct: 765 EEMEKNGCNFSPRTYSILTQ 784
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 122/308 (39%), Gaps = 6/308 (1%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ LL+ R GL D+ L M D+ T++++I K + + + M
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEE-FVSMDIYTFNLMINVYCKMGFVKEAKQFMCKM 218
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+ P+ T + I Y R+K + ++ E + + N + +G+I
Sbjct: 219 IQAGLSPDYFTSTSFILGYCRSKDVD----SAFRVFEEMPNRNEVSYNQLIHGLCEAGRI 274
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D + + + P++ T+ L+ + + M + E +++ + ++TYN +
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLER-NLVPDLITYNSL 333
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I RAG L L LM+ + P T + + + E+ + + +
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ + ++ L+D Y ++ E + E M + C P+ T+ ++ + G A
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453
Query: 330 FQDLVEKM 337
D + KM
Sbjct: 454 LFDQMVKM 461
>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
Length = 610
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 155/342 (45%), Gaps = 50/342 (14%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
++P +AH F+ +VD+G +P +
Sbjct: 92 ARRPHQAHSAFRHLVDDGH------------------------------------RPSLV 115
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ L+ + AFD + LL+++ G+RP+++ +N LI+A A+ E T ++M
Sbjct: 116 TYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRM 175
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF------QSAGIQPSINTFNILLDSY 178
C P T N ++ +G +G+ + ++ ++ A ++P++ T+NIL+ ++
Sbjct: 176 GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAW 235
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPS 237
AG E+ V+ M+ +VTYN + A+ + + + E L M + ++ S
Sbjct: 236 CDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS 295
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
T +V Y G +LG LR + +S ++ + + FN L+ + A +
Sbjct: 296 ERTWGIIVGGYCREG---RLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDD 352
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVE 335
VL +M+Q G KPD VTY + A S+ G M K F ++E
Sbjct: 353 VLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIE 394
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 146/333 (43%), Gaps = 15/333 (4%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-----CQPDVN 64
+A F M GC +F L+ YG +G +++ + + M + +P++
Sbjct: 167 EATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLT 226
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+IL+K+ A ++ +++ M G P+ VTYNTL AY + E +V+M
Sbjct: 227 TYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEM 286
Query: 125 LSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ T + + G++ +C + + +G+ P++ FN LL + A
Sbjct: 287 AQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDAND 346
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ V+ M+++ IVTY+ ++A G + + +F M I+P
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---------AYGRLKCFAEMKG 294
L + Y A +PEK +LR + + + V F ++ Y LK + +
Sbjct: 407 LAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWTFETLIWGYSELKQPWKAEE 466
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
VL++MQ G +P + TY + A+ G+ +A
Sbjct: 467 VLQMMQDAGVRPKQTTYCLVADAWKAVGLVENA 499
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G D + ++ L SAY ++ +A L+ M + T+ I
Sbjct: 242 EEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGI 301
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + + + M G+ PN + +NTL+ + A A ++ L M
Sbjct: 302 IVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFG 361
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L A + G + K ++K AGI+P ++IL Y +A EK
Sbjct: 362 IKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAE 421
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAF------GRAGDLKQ---MEYLFRLMRSERIKPSCV 239
++ M + +VT+ VI + +LKQ E + ++M+ ++P
Sbjct: 422 ELLRQMGRLGVRPNVVTFTTVISGWTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQT 481
Query: 240 TLCSLVRAYGHAG 252
T C + A+ G
Sbjct: 482 TYCLVADAWKAVG 494
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 7/318 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK + + A +LF+ MV G C N ++ AL+ + D A +++ + D
Sbjct: 55 GLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKR-DF 113
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ L+ + + D+ A + M+ +G P V++N +I RA+ A+
Sbjct: 114 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALE 173
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ D P++ T + + S Q+D ++ ++ S G +P + + L+ +
Sbjct: 174 VFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 233
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG + ++ M +VTY +VID + G + +FR + + + P+ V
Sbjct: 234 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 293
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y A + ++ G V+R + + V +N ++ + E G+ M
Sbjct: 294 TYSALIGGYCRASRVDEGGKVMREMACRP---NVVTYNTMIWGLSMVDRNEEAYGMFREM 350
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ G PD TYR + RA
Sbjct: 351 SECGFVPDARTYRGLKRA 368
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 1/299 (0%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
EG N ++ + +L R G +A + QPDV +Y+ LI K D
Sbjct: 4 EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63
Query: 81 KVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
L M + G RPN TYN L+D + + + D PDV T N
Sbjct: 64 AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ A G++D + + G P++ +FN ++ +A V M +
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VTY++VID ++ L + + L M SE +P V LV + AG+ +
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+LR + + + D V + ++D ++ + + + C P+ VTY ++ Y
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 7/322 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK KA +F M +G + S TAL+ AYG+ ++KA S+ M ++ +P
Sbjct: 151 GKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSS-GPEPS 209
Query: 63 VNTYSILIKSCLKAFAFDKVQAL---LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
TY +++K ++ F + + L D ++P+ ++ +I Y +A + E
Sbjct: 210 ALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNY-EKAR 268
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ ++ E P +L +F + + K Y++ Q AG++P + ++ +L+++YG
Sbjct: 269 KIFGLMRERGVPQSTVTYNSLMSFETN--YKEVSKTYDQMQRAGLRPDVVSYALLINAYG 326
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA E+ AV E M T YNI++DAF +G + Q +F+ MR +R P
Sbjct: 327 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDIC 386
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ +++ AY +A E R + + V + L+ Y ++ +M E M
Sbjct: 387 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEM 446
Query: 300 QQRGCKPDKVTYRTMVRAYSTN 321
Q G K ++ Y M+ AY N
Sbjct: 447 QVHGIKANQAIYTAMMDAYGKN 468
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKA---FSLLEHMKNTPDC 59
GK KQ KA +F+ M+ G + + ++ +L + F +A F L + +P
Sbjct: 186 GKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSP-L 244
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD + ++I KA ++K + + M +G+ +TVTYN+L+ K E+
Sbjct: 245 KPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYK---EVSK 301
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
T +M PDV + + A+G + + + +E+ AG++P+ +NILLD++
Sbjct: 302 TYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 361
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G ++ V + M++ + I +Y ++ A+ A D++ E FR ++ + +P+ V
Sbjct: 362 ISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVV 421
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L++ Y EK+ + I + + ++DAYG+ K F + M
Sbjct: 422 TYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEM 481
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
G PD+ ++ T K A
Sbjct: 482 GFCGVPPDRKATNILLSLAKTEAEKEEA 509
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 49 LLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+LE ++ P + +L+ + K F+K + + DM +G P+ +++ L++AY
Sbjct: 126 ILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAY 185
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQ 165
G+ K + + E +MLS EP T L+ F + E+ +E + + ++
Sbjct: 186 GKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLK 245
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P F++++ Y KAG++EK + M++ + VTYN ++ + K++
Sbjct: 246 PDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSF---ETNYKEVSKT 302
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
+ M+ ++P V+ L+ AYG A + E+ +V + ++ + +N L+DA+
Sbjct: 303 YDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 362
Query: 286 LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY-STNGMKNHAKEFQDL 333
+ + V + M++ C PD +Y TM+ AY + + M+ K F+ L
Sbjct: 363 SGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRL 411
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 4/229 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M K EKA ++F M + G +T ++ +L+S K + ++ +
Sbjct: 257 MYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQR----AGLR 312
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV +Y++LI + KA ++ A+ +M G+RP YN L+DA+ + M +
Sbjct: 313 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 372
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M + C PD+ + L A+ N+ ++ EK + + + G +P++ T+ L+ Y K
Sbjct: 373 FKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAK 432
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+ EKM E MQ + Y ++DA+G+ D + F+ M
Sbjct: 433 ISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEM 481
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK ++ E+A +F+ M+D G +++ LL A+ SG+ D+A ++ + M+ C PD
Sbjct: 326 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRD-RCTPD 384
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ ++ + + A + + + G PN VTY TLI Y + +M
Sbjct: 385 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYE 444
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M + + + A+G + + +++ G+ P NILL
Sbjct: 445 EMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEA 504
Query: 183 HFEKMSAVMEYMQKY 197
E+ + ++ Y KY
Sbjct: 505 EKEEANLLVGYSSKY 519
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
++P +AH F+ +VD+G H +P +
Sbjct: 92 ARRPHQAHSAFRHLVDDG-----------------------------H-------RPSLV 115
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+ L+ + AFD + LL+++ G+RP+++ +N LI+A A+ E T ++M
Sbjct: 116 TYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRM 175
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF------QSAGIQPSINTFNILLDSY 178
C P T N ++ +G +G+ + ++ ++ A ++P++ T+NIL+ ++
Sbjct: 176 GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAW 235
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPS 237
AG E+ V+ M+ +VTYN + A+ + + + E L M + ++ S
Sbjct: 236 CDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS 295
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
T +V Y G +LG LR + +S ++ + + FN L+ + A +
Sbjct: 296 ERTWGIIVGGYCREG---RLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDD 352
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVE 335
VL +M+Q G KPD VTY + A S+ G M K F ++E
Sbjct: 353 VLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIE 394
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 6/316 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-----CQPDVN 64
+A F M GC +F L+ YG +G +++ + + M + +P++
Sbjct: 167 EATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLT 226
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+IL+K+ A ++ +++ M G P+ VTYNTL AY + E +V+M
Sbjct: 227 TYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEM 286
Query: 125 LSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ T + + G++ +C + + +G+ P++ FN LL + A
Sbjct: 287 AQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDAND 346
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ V+ M+++ IVTY+ ++A G + + +F M I+P
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + Y A +PEK +LR + + + V F ++ + + V M+ G
Sbjct: 407 LAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAG 466
Query: 304 CKPDKVTYRTMVRAYS 319
+P+ T+ T++ YS
Sbjct: 467 VRPNLRTFETLIWGYS 482
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G D + ++ L SAY ++ +A L+ M + T+ I
Sbjct: 242 EEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGI 301
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + + + M G+ PN + +NTL+ + A A ++ L M
Sbjct: 302 IVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFG 361
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L A + G + K ++K AGI+P ++IL Y +A EK
Sbjct: 362 IKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAE 421
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + +VT+ VI + D+ ++ MR ++P+ T +L+ Y
Sbjct: 422 ELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGY 481
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + ++ + + + DA+
Sbjct: 482 SELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAW 516
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 84/220 (38%), Gaps = 9/220 (4%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTP 57
G C++ L + M D G N F LL + D L+E
Sbjct: 305 GYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQF---- 360
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+PD+ TYS + + K + M GI P+ Y+ L Y RA+ +
Sbjct: 361 GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKA 420
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E L +M P+V T + + + + + Y + AG++P++ TF L+
Sbjct: 421 EELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWG 480
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
Y + K V++ MQ TY +V DA+ G
Sbjct: 481 YSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVG 520
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 5/330 (1%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A +F +M + GC + SF +L +S + A++L + +K + D +Y
Sbjct: 142 KPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKG--KFKADCVSY 199
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++ K +L +M +G+ PN TYN +++ Y RA E ++M
Sbjct: 200 NIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKK 259
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C+ DV T + G G+I + + G+ PS+ TFN L+ K E
Sbjct: 260 RKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVEN 319
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ E M K Y +TYN+VI G++++ L M + +P+ T L+R
Sbjct: 320 AILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIR 379
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM--KGVLEV-MQQRG 303
+ AG+ EK + + + N D + + +N L+++ K + G L V M RG
Sbjct: 380 YFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRG 439
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
P K+T+ ++ G ++ AKE L
Sbjct: 440 FLPRKLTFNRVLDGLLLTGNQDFAKEILSL 469
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ KA E+ + MV+ G N ++ +L+ Y R+G ++A+ MK C DV T
Sbjct: 210 KRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKR-KCDIDVVT 268
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I + + + + M G+ P+ T+N LI + L +M+
Sbjct: 269 YTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMV 328
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
P+ T N +R + G++ + E+ + +P++ T+NIL+ + AG E
Sbjct: 329 KRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIE 388
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + + M + TYNI+I++
Sbjct: 389 KGLDLFQKMGNGDCLPNLDTYNILINS 415
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 119/299 (39%), Gaps = 7/299 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
KA + + + P +++ I C + F + L+S M + + P+ T+ +
Sbjct: 74 KALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAII 133
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS--A 162
+ Y + M C D+ + N L S ++ E Y F++
Sbjct: 134 AERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRV---EMAYNLFKALKG 190
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
+ ++NI+++ + K +++ M + + + TYNI+++ + RAG +
Sbjct: 191 KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEA 250
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
F M+ + VT S++ G G+ ++ +V + ++ FN L+
Sbjct: 251 WGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQI 310
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ + E M +RG P+ +TY ++R G A E + +E D+ C
Sbjct: 311 LCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERME--DDDC 367
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 80/212 (37%), Gaps = 43/212 (20%)
Query: 157 EKFQSAGIQPSINTFNILLD---SYG-KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
E S IQ + N +L ++G KA HF K ++ + Y + + +++ ID
Sbjct: 47 ESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFK---ILSHHPSYCHQAS--SFDHAIDI 101
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
R D + + +L MRS R+ PS T + Y GKP + +V + D
Sbjct: 102 CARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQD 161
Query: 273 TVFFNCLVDAYGRLK-------CFAEMKG---------------------------VLEV 298
FN ++D + K F +KG +L+
Sbjct: 162 LSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKE 221
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M +RG P+ TY M+ Y G N A F
Sbjct: 222 MVERGLTPNLTTYNIMLNGYFRAGQTNEAWGF 253
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 1/312 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +F + G T SF L++ +S D+ F L + M+ PDV TYS+LI
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN-RIYPDVFTYSVLI 300
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K D + L +M +G+RPN +T+ LID R++ T +ML+ +
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ N L G ++ K ++ + G++P T+ L+D Y K G E +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M + V + +I F R G ++ E R M +KP T ++ Y
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G + +L+ + + + +N L++ + +LE M G PD +T
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540
Query: 311 YRTMVRAYSTNG 322
Y ++ + NG
Sbjct: 541 YNILLEGHCKNG 552
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A +LF M G N +FTAL+ RS D A + M T +
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML-TMGVK 360
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKMFAEMEL 119
PD+ Y+ L+ K +K + L+ +M G++P+ +TY TLID Y + + + ME+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
M E D + F G++ E+ + AG++P T+ +++D Y
Sbjct: 421 R-KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC 479
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G+ + +++ MQ + ++TYN++++ + G +K L M + + P +
Sbjct: 480 KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDI 539
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
T L+ + GK E L L+ + +++D ++ LV Y +
Sbjct: 540 TYNILLEGHCKNGKAEDL---LKLRNEKGLIVDYAYYTSLVSEYNK 582
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 135/353 (38%), Gaps = 37/353 (10%)
Query: 6 KQPEKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
K + A +F A++D G + F AL+ AY SG A ++N+ + Q +
Sbjct: 131 KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS-NFQIPFH 189
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
L+ + + + + S++ G P YN LI+ + + + +L ++
Sbjct: 190 GCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P + N + S +D + + + I P + T+++L+ K G
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 185 EKMSAVMEYMQK-----------------------------YHYSWT------IVTYNIV 209
+ + + MQ+ YH T +V YN +
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTL 369
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
++ + GD+ + L M+ +KP +T +L+ Y G E + + ++ +
Sbjct: 370 LNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+LD V F L+ + R + + L M + G KPD TY ++ Y G
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
NS T+ Y + G P + +NIL++ + K G + ++K T V
Sbjct: 200 NSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV 259
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
++N +I+ ++ +L + L + M RI P T L+ G+ + + +
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ + + F L+D R + M G KPD V Y T++ G
Sbjct: 320 QQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379
Query: 325 NHAKEFQDLVEKMDETCLAMKRPD 348
N A++ +DE + +PD
Sbjct: 380 NKARKL------VDEMKMVGMKPD 397
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 1/301 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + ++ +L+ Y + GL A +L M+N C+P+V +Y+IL+ K D+
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK-GCKPNVYSYTILVDGFCKLGKIDE 436
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
LL++MS G++PNTV +N LI A+ + E +M + C+PDV+T N +
Sbjct: 437 AYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 496
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+I S G+ + T+N L++++ + G ++ ++ M
Sbjct: 497 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL 556
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+TYN +I RAG++ + LF M + + PS ++ L+ +G E+
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + D V FN L++ R + + +Q G PD VTY T++
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676
Query: 322 G 322
G
Sbjct: 677 G 677
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 3/252 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + ++A+ L M +G NT F L+SA+ + +A + M C+
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCK 485
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI + LL DM ++G+ NTVTYNTLI+A+ R E
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 545
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M+ + D T N ++ +G++D +EK G+ PS + NIL++ +
Sbjct: 546 VNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 605
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ + M + IVT+N +I+ RAG ++ +FR +++E I P VT
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 665
Query: 241 LCSLVRAYGHAG 252
+L+ G
Sbjct: 666 YNTLMSWLCKGG 677
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 148/334 (44%), Gaps = 8/334 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG CK + +A ++ M+ G + ++ L++ + G D A L +
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 343
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEM 117
+P ++ LI + D +A+LSDM T GI P+ TYN+LI Y + +
Sbjct: 344 -KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L M ++ C+P+V++ + F G+ID + + G++P+ FN L+ +
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ K + + M + + T+N +I ++K +L R M SE + +
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +L+ A+ G+ ++ ++ + +LD + +N L+ R + + + E
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE 582
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
M + G P ++ ++ +GM A EFQ
Sbjct: 583 KMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
F L+ + G D A ++L M + PDV TY+ LI K +L DM
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G +PN +Y L+D + + E L +M ++ +P+ NC + AF +I
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + + G +P + TFN L+ + + ++ M VTYN +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I+AF R G++K+ L M + +T SL++ AG+ +K S+ + +
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ ++ N L++ R E + M RG PD VT+ +++ G
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 642
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 1/270 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ + M ++GC N S+T L+ + + G D+A++LL M + +P+ ++ LI
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM-SADGLKPNTVGFNCLI 460
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + + +M +G +P+ T+N+LI L M+SE
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
+ T N + AF G+I K + G T+N L+ +AG +K ++
Sbjct: 521 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSL 580
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M + + ++ NI+I+ R+G +++ + M P VT SL+
Sbjct: 581 FEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 640
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
AG+ E ++ R + I DTV +N L+
Sbjct: 641 AGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 144/381 (37%), Gaps = 67/381 (17%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG + + L M DEG F +++ Y ++G + L+ M+N C+P
Sbjct: 115 LGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP 174
Query: 62 DVNTYSILIK-----SCLKA-----------------FAF-------------DKVQALL 86
+Y+++++ +C K F F D ++L
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVL 234
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
DM+ G PN+V Y TLI + + E L +M C PD T N +
Sbjct: 235 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 294
Query: 147 GQIDTMEKCYEKFQSAGIQPSINT-------------------------------FNILL 175
+I+ K + G P T FN L+
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLI 354
Query: 176 DSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
+ G + AV+ M Y + TYN +I + + G + + R MR++
Sbjct: 355 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC 414
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
KP+ + LV + GK ++ ++L + + +TV FNCL+ A+ + E
Sbjct: 415 KPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 474
Query: 295 VLEVMQQRGCKPDKVTYRTMV 315
+ M ++GCKPD T+ +++
Sbjct: 475 IFREMPRKGCKPDVYTFNSLI 495
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 85/224 (37%), Gaps = 36/224 (16%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK-YHYSW 201
G++G+ T+++ + + GI + F ++ Y KAG + + +M M+ Y
Sbjct: 115 LGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP 174
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
T +YN+V++ K +F M S +I P+ T +++A + + SVL
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVL 234
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC----------------- 304
R + + ++V + L+ + + E +LE M GC
Sbjct: 235 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 294
Query: 305 ------------------KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD +TY ++ G + AK+
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 3/310 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ M G D +SF LL A + GL +A + + M++ PD+ +Y+ L+ +
Sbjct: 294 VFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRD--QYTPDLRSYTALMLAW 351
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
A + + +DM +G++P+ V +NT+ID R + E M ++ P+V
Sbjct: 352 CNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNV 411
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
WT +R G++D +C+E+ Q AG QP + T+ LL YG A ++++A++E
Sbjct: 412 WTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEE 471
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M + TYN +I +++ M ++ ++P+ T ++++Y G+
Sbjct: 472 MAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGR 531
Query: 254 PEKLG-SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+G +V + I D + ++ + R AE LE M Q+G K ++ Y
Sbjct: 532 NYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYN 591
Query: 313 TMVRAYSTNG 322
+S G
Sbjct: 592 KFAADFSKAG 601
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 126/339 (37%), Gaps = 16/339 (4%)
Query: 3 GKCKQPEKAHELFQAMVD---EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---- 55
G PE + A+ D G DAN ++ + LS L +H
Sbjct: 164 GASSHPEHVGRVCAAIADVMAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRR 223
Query: 56 -------TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
+ + + TY ++ KA F+ + AL+ +M G + I ++
Sbjct: 224 FFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKAGAL-CMDAFKIAIKSF 282
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
A M + V + NC L A G + +++ + P +
Sbjct: 283 AAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDL 341
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
++ L+ ++ A + + V M + +V +N +ID R + +F L
Sbjct: 342 RSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFEL 401
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M+++ P+ T L+R + GK + + + + + CL+ YG K
Sbjct: 402 MKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKR 461
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +LE M Q+GC PD TY +++ + M + A
Sbjct: 462 MDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDA 500
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 15/302 (4%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A S H+ + +P + TY+ L+ + AFD + LL+++ G+RP+++ +N L
Sbjct: 97 QAHSAFRHLVDDGH-RPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNAL 155
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF----- 159
I+A A+ E T ++M C P T N ++ +G +G+ + ++ ++
Sbjct: 156 INALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGA 215
Query: 160 -QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
A ++P++ T+NIL+ ++ AG E+ V+ M+ +VTYN + A+ + +
Sbjct: 216 GGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDE 275
Query: 219 LKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTV 274
+ E L M + ++ S T +V Y G +LG LR + +S ++ + +
Sbjct: 276 TWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREG---RLGEALRCVRQMKDSGVLPNVI 332
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDL 333
FN L+ + A + VL +M+Q G KPD VTY + A S+ G M K F +
Sbjct: 333 VFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKM 392
Query: 334 VE 335
+E
Sbjct: 393 IE 394
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 6/316 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD-----CQPDVN 64
+A F M GC +F L+ YG +G +++ + + M + +P++
Sbjct: 167 EATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLT 226
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+IL+K+ A ++ +++ M G P+ VTYNTL AY + E +V+M
Sbjct: 227 TYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEM 286
Query: 125 LSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ T + + G++ +C + + +G+ P++ FN LL + A
Sbjct: 287 AQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDAND 346
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ V+ M+++ IVTY+ ++A G + + +F M I+P
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L + Y A +PEK +LR + + + V F ++ + + V M+ G
Sbjct: 407 LAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAG 466
Query: 304 CKPDKVTYRTMVRAYS 319
+P+ T+ T++ YS
Sbjct: 467 VRPNLRTFETLIWGYS 482
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M G D + ++ L SAY ++ +A L+ M + T+ I
Sbjct: 242 EEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGI 301
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ + + + M G+ PN + +NTL+ + A A ++ L M
Sbjct: 302 IVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFG 361
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T + L A + G + K ++K AGI+P ++IL Y +A EK
Sbjct: 362 IKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAE 421
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + +VT+ VI + D+ ++ MR ++P+ T +L+ Y
Sbjct: 422 ELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGY 481
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+P K VL+ + ++ + + + DA+
Sbjct: 482 SELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAW 516
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 84/220 (38%), Gaps = 9/220 (4%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTP 57
G C++ L + M D G N F LL + D L+E
Sbjct: 305 GYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQF---- 360
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+PD+ TYS + + K + M GI P+ Y+ L Y RA+ +
Sbjct: 361 GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKA 420
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
E L +M P+V T + + + + + Y + AG++P++ TF L+
Sbjct: 421 EELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWG 480
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
Y + K V++ MQ TY +V DA+ G
Sbjct: 481 YSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVG 520
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 7/318 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK + + A +LF+ MV G C N ++ AL+ + D A +++ + D
Sbjct: 105 GLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKR-DF 163
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TY+ L+ + + D+ A + M+ +G P V++N +I RA+ A+
Sbjct: 164 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALE 223
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ D P++ T + + S Q+D ++ ++ S G +P + + L+ +
Sbjct: 224 VFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 283
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
AG + ++ M +VTY +VID + G + +FR + + + P+ V
Sbjct: 284 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 343
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ Y A + ++ G V+R + + V +N ++ + E G+ M
Sbjct: 344 TYSALIGGYCRASRVDEGGKVMREMACRP---NVVTYNTMIWGLSMVDRNEEAYGMFREM 400
Query: 300 QQRGCKPDKVTYRTMVRA 317
+ G PD TYR + RA
Sbjct: 401 SECGFVPDARTYRGLKRA 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 127/311 (40%), Gaps = 1/311 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A L + M EG N ++ + +L R G +A + QPDV +Y+
Sbjct: 42 DAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTT 101
Query: 69 LIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI K D L M + G RPN TYN L+D + + +
Sbjct: 102 LINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKR 161
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
D PDV T N + A G++D + + G P++ +FN ++ +A
Sbjct: 162 DFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADA 221
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V M + +VTY++VID ++ L + + L M SE +P V LV
Sbjct: 222 LEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 281
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ AG+ + +LR + + + D V + ++D ++ + + + C P+
Sbjct: 282 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPN 341
Query: 308 KVTYRTMVRAY 318
VTY ++ Y
Sbjct: 342 VVTYSALIGGY 352
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 8/293 (2%)
Query: 39 RSGLFDKAFSLLEHMKNTPDCQPDVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRP 96
R+G ++A L + P CQ + TY++LI+ A D +LL +M +G++
Sbjct: 3 RAGSHNQALQLF---RENP-CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQC 58
Query: 97 NTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
N T + ++ R A+ +E + +PDV + + G++D
Sbjct: 59 NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 118
Query: 156 YEKFQSA-GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ K +A G +P+ T+N L+D K + AV+ +K ++ +VTYN ++ A
Sbjct: 119 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALF 178
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G + + F M E P+ V+ +++ A + V + + D + V
Sbjct: 179 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 238
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
++ ++D + E + +L+ M GC+PD V Y +V +S G + A
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSA 291
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELF-QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L + K+ A+ F A G + ++T +L GR+ FD +LL+ M C
Sbjct: 40 ILKQQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIRE-GC 98
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AEME 118
+P+V TY+ LI +A D L + M G P+ VTY TLID +A A ME
Sbjct: 99 EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAME 158
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M PD +T + + G +G+++ K + + G PS+ T+NI++D +
Sbjct: 159 L-YRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLH 217
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KAG F+ + +Q+ Y+ VTY I+++ G G ++ E +F M
Sbjct: 218 AKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADN 277
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+V +G G EK + +S + + N L+ AY R + GVL
Sbjct: 278 PIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGG 337
Query: 299 MQQRGCKPDKVTYRTMV 315
M + G P TY +++
Sbjct: 338 MAKWGLYPTLQTYTSLL 354
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 17/323 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G Q E +A+ N +L +G+ A++ + + D
Sbjct: 10 GILNQHGWGDETVRALAGLNASLNAYQVNEILKQQKEAGV---AYNFFIWARKQAGFKHD 66
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFA 115
V+TY+ ++ +A +FD + LL +M +G PN VTYN LI YGRA K+F
Sbjct: 67 VHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFN 126
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M++ CEPD T + +G D + Y + Q AG +P T++I++
Sbjct: 127 VMQMV-------GCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIII 179
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
GKAG + M Y+ ++VTYNI+ID +AG L+ ++
Sbjct: 180 HCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYA 239
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P VT ++ G+ G E V ++ + + D F +VD +G+ +
Sbjct: 240 PDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQW 299
Query: 296 LEVMQQRGCKPDKVTYRTMVRAY 318
M G +P+ +++ AY
Sbjct: 300 FNRMLDSGLQPNVPACNSLLSAY 322
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 43/346 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + + +LF M GC+ + ++ L+ ++G D A L M++ +PD
Sbjct: 113 GRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHA-GFRPD 171
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYSI+I KA + L +M+ +G P+ VTYN +ID + +A F +M L L
Sbjct: 172 TFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKF-DMALKLY 230
Query: 123 KMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------ 163
L E PD T + GN G I+ E+ +E+ + AG
Sbjct: 231 SDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKT 290
Query: 164 -----------------IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+QP++ N LL +Y ++ ++ V+ M K+ T+ TY
Sbjct: 291 GNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTY 350
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++ + + + LF LM P+ +CSL+ + G AG +G + F D
Sbjct: 351 TSLLSSCAACRAAWEYDALFGLMGGTG-HPAHPFVCSLLASGGTAGGTMVVG-IRCFFDA 408
Query: 267 ---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
++ F + L+D R V EV ++ P+ V
Sbjct: 409 MQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEKNLYPNAV 454
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ E CEP+V T N + +G + +D+
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + Q G +P T+ L+D KAG + + MQ + TY+I+I
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHC 181
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M PS VT ++ + AGK + + + D
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V + +++ G + + V E M++ G D + MV + G A ++
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQW 299
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AG + ++T+ +L G+A F+ ++ +++ M + +VTYN +I +GRA DL
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF +M+ +P VT C+L+ AG + + R + ++ DT ++ +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSII 178
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ G+ + M RG P VTY ++ ++ G + A K + DL E
Sbjct: 179 IHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK EKA + F M+D G N + +LLSAY RS +D A +L M
Sbjct: 286 MWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKW-GLY 344
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
P + TY+ L+ SC A + AL M G
Sbjct: 345 PTLQTYTSLLSSCAACRAAWEYDALFGLMGGTG 377
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 163/396 (41%), Gaps = 68/396 (17%)
Query: 2 LGKCKQPEKAHELFQ-AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK---NTP 57
L K ++ +A+++F+ ++ + CD N ++ L+ + ++G ++AF LL MK ++P
Sbjct: 79 LVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSP 138
Query: 58 D-----------------------------CQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
D C PD ++IL+ KA + + ++ +
Sbjct: 139 DVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEE 198
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
MS +GI P+ VTYN+LID ++ E L M+ P++ T N + + +G
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
+ E+ +G P + TFN L+ + + +K V+ M+K + +VTYN+
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---- 264
+I AG + L M I P +T SL+ + + E+ + +
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 265 ---------------------DNSDIMLDTVF----------FNCLVDAYGRLKCFAEMK 293
D + +LD +F FN L++ + E +
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+L VM++ GC P TY +V G + AKE
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKE 474
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 2/276 (0%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C + TY+ LI KA ++ LL++M +G P+ VT+++++ A +
Sbjct: 101 CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAM 160
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ S +C PD N + + Q+ + E+ GI P + T+N L+D
Sbjct: 161 QYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K+ E+ ++E M K +VTYN +I + + G L M P
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT SL+ + K +K VL + + V +N L+ E +L
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
M RG PD +TY +++ + N A + Q+L+
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM 374
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 3/246 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
AH+L + M+ G + +F +L+S + + DKA +L MK C P++ TY++LI
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL-CAPNLVTYNVLI 320
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
A ++ LLS+M +GI P+ +TYN+LI + R + M+
Sbjct: 321 SGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380
Query: 131 PDVWTMNCTLR-AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD + CTL A S + D + AG P++ TFN L++ + ++
Sbjct: 381 PDGISY-CTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ M++ TY +++ +AG + + + +M SE I+P + ++V
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499
Query: 250 HAGKPE 255
GK +
Sbjct: 500 REGKQD 505
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 6/275 (2%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSD-MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T + L+++ +KA + + D + Q N +TYNTLI + +A L +
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PDV T + ++A N+G + + + +S P FNIL+ KA
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQ 188
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ ++E M + +VTYN +ID ++ +++ L M +++P+ VT +
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G ++ + S D V FN L+ + + + VL +M++
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
C P+ VTY ++ G N A E L+ +MD
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACE---LLSEMD 340
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+A +L + MV N ++ L+ Y ++G A L+E M +
Sbjct: 217 GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGT-H 275
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEM 117
PDV T++ LI + DK +L M PN VTYN LI GRA E+
Sbjct: 276 PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACEL 335
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
L +M PD+ T N + F + QI+ + G+ P ++ L +
Sbjct: 336 ---LSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K+ F++ A+++ M + T+N +++ + L + +L +MR P+
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVL 261
T LV AG+ + VL
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVL 476
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C++ +KA E+ M C N ++ L+S +G ++A LL M +
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM-DGRGIL 345
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+ LI + F ++ + + M +G+ P+ ++Y TL A +++ F E
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M P+++T N + S ++D + G P+ +T+ +L+ K
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
AG + V+ M + + ++ R G
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 13/337 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A EL + M N ++ +++ + G A ++ M+ PD TY
Sbjct: 131 KPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLV--- 122
+ LI K + + +M T+G + P+ V YN LI Y ++++ L
Sbjct: 187 ATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD---VGKLDVALQYRE 243
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M+ V T N + A + E+ Q G P + T+NIL++ Y K G
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ +K V E M + T VTY +I F R G +++ + LF + + I+P V
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L+ ++ G E+ ++ ++ I D + +N L+ + L E + +++ M +R
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G +PD V+Y T++ YS G A +D E MD+
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRD--EMMDK 458
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A+ + + M G + ++ L++ Y + G KA + E M + TY+ LI
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQK-GVRATAVTYTSLI 331
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + L + +GIRP+ V YN LI+++ + +M +
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N +R F G++D ++ GIQP + ++N L+ Y G + V
Sbjct: 392 PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ M ++ T++TYN +I + E L + M ++ I P T SL+
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ ++A L M G + S+ L+S Y G A + + M +
Sbjct: 406 LLGRL---DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK-GFN 461
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
P + TY+ LI+ K D + L+ +M +GI P+ TY +LI+
Sbjct: 462 PTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 147/332 (44%), Gaps = 1/332 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ + +L + MV GC N +F L+ R+GLF++ +L M + C PD+
Sbjct: 239 KRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH-GCTPDIRM 297
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ K + +L M + G++PN V YNT++ A+ + + E L +M
Sbjct: 298 YATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF 357
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
DC D T N + F +G + + + E+ G P + T+ +++ + K G +
Sbjct: 358 DNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLID 417
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ +++ M ++Y IV+ A E L M + P+ VT +++
Sbjct: 418 EAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVI 477
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G E+ +L+ + + D + ++ ++D G+ E +L VM +G
Sbjct: 478 NFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 537
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
P+ + Y ++ A S G N + D ++ +
Sbjct: 538 PNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A EL M D C + +F L+ + ++GL + LLE M C PDV TY+
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH-GCVPDVITYTT 405
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K D+ LL M+ G RPNT++Y ++ A+ + + E + +M+ +
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+ T N + G ++ + ++ G P + +++ ++D GKAG ++
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M S + Y+ + A + G + ++ +F ++ I+
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRS------------ 573
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
D V +N ++ + + L M GC P++
Sbjct: 574 -----------------------DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
TY ++R ++ G A+E
Sbjct: 611 STYTILIRGLASEGFVKEAQEM 632
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 139/332 (41%), Gaps = 39/332 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAY-GRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A + Q + GC + + +L+A + G D+A LL + + C PDV +Y+
Sbjct: 170 RSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYN 229
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
++K A + +VQ L+ +M G PN VT+NTLI R +F + L +M+
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C PD+ L G ++ + ++ S G++P++ +N +L A +E+
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ M VT+NI++D F + G + ++ L M P +T +++
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
+ G ID + ++L + M GC+P+
Sbjct: 410 FCKEG----------LIDEAVMLLKS-------------------------MAACGCRPN 434
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
++Y +++ + + +DL+ +M E
Sbjct: 435 TISYTIVLKGLCS---AERWVDAEDLMSQMIE 463
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 139/307 (45%), Gaps = 6/307 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK---AFAFDKV 82
N ++ ++ A G A S+L+ M+ C P Y +++++ F
Sbjct: 114 NAYTYFPVVRALCARGRIADALSVLDEMRRR-GCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML--SEDCEPDVWTMNCTL 140
+L D+ +G + N +++A + L L++ L S C+PDV + N L
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
+ + + ++ E+ G P++ TFN L+ + G FE++ V+ M + +
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
I Y V+D + G L+ + M S +KP+ V ++++ A + E+ +
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
L + ++D LD V FN LVD + + + +LE M + GC PD +TY T++ +
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412
Query: 321 NGMKNHA 327
G+ + A
Sbjct: 413 EGLIDEA 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + ++A EL MV++G NT ++++ SA + G ++ + +++++ +
Sbjct: 515 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV-TIRS 573
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K D+ L+ M + G PN TY LI E +
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ--- 630
Query: 122 VKMLSEDC 129
+ML+E C
Sbjct: 631 -EMLTELC 637
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 4/321 (1%)
Query: 20 DEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAF 79
EG + ++T ++ GR+ F+ LL+ M+ C+P V TY+ LI + +A
Sbjct: 60 QEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRRE-GCEPCVVTYNRLIHAYGRANFL 118
Query: 80 DKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ + M +G P+ VTY TL+D + +A KM +PD +T +
Sbjct: 119 GEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVI 178
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ G +G++ K +E+ G PS+ T+NI++D K+G++ + MQ +
Sbjct: 179 IHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGF 238
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
VTY+I+++ G+ G L++ E +F M P +V +G A E+
Sbjct: 239 HPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALE 298
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ + +S + + N L+ +Y R++ F GV+E M+ G P T+ T++ +
Sbjct: 299 WYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTH-TILLSSC 357
Query: 320 TNGMKNHAKEFQDLVEKMDET 340
T ++H + +L+ + ET
Sbjct: 358 TASAQHH--QVVNLMHRSSET 376
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 3/279 (1%)
Query: 40 SGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV 99
SGL A + K + DV TY+ +I +A F+ LL +M +G P V
Sbjct: 47 SGL---ALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVV 103
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
TYN LI AYGRA E +M E C PD T + +G D Y+K
Sbjct: 104 TYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKM 163
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
Q AG QP T+++++ GKAG + + E M + ++ ++VTYNI+ID ++G+
Sbjct: 164 QQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNY 223
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
L+ M+ P VT ++ G G ++ + ++ + + D + +
Sbjct: 224 VMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVM 283
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
VD +G+ + + M G P+ +++ +Y
Sbjct: 284 VDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSY 322
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + +A +LF+ MV+ G + ++ ++ +SG + A L M++ P
Sbjct: 182 LGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDA-GFHP 240
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TYSI+++ + + + + ++M G P+ Y ++D +G+A+ AE L
Sbjct: 241 DRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARN-AERALEW 299
Query: 122 V-KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
KML P+V N L ++ Q D E ++ G+ P++ T ILL S
Sbjct: 300 YQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTA 359
Query: 181 AGHFEKMSAVMEYMQKYHYSWT 202
+ ++ +M + YS+
Sbjct: 360 SAQHHQVVNLMHRSSETVYSFV 381
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK + E+A E +Q M+D G N Q +LL +Y R FD AF ++E MK
Sbjct: 286 MWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMK-AWGLV 344
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMS 90
P + T++IL+ SC + +V L+ S
Sbjct: 345 PTLQTHTILLSSCTASAQHHQVVNLMHRSS 374
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD----- 58
K KQ +A+++F MVD GC N ++ AL+ ++G KAF + + T D
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429
Query: 59 ----CQ------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
C+ P+V TY L+ KA D LL M + G PN + Y+ LID +
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+A + ++M P V T + G++D K + P++
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 549
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ ++D + G EK ++ M++ S +VTY +ID G+AG + LF
Sbjct: 550 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M + P+ VT L+ AG +K +L + + + C + + K
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KS 667
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE M+ G P Y ++ +S G A E
Sbjct: 668 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 710
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 140/336 (41%), Gaps = 52/336 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF+ M GC ++TAL+ AY ++ +A + M + C+P+ TY
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA-GCRPNDVTYGA 398
Query: 69 LIKSCLKAF----AFDKVQALLSDMST------------QGIRPNTVTYNTLIDAYGRAK 112
L+ KA AF+ L+ + + PN VTY L+D +A
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
L MLS CEP+ + + F +G+ID+ ++ + + G PS++T+
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D K G + V+ M K + +VTY +ID R G+ ++ L LM +
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +L+ G AGK D+ LD
Sbjct: 579 GCSPNVVTYTALIDGLGKAGK-------------IDLSLD-------------------- 605
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ M ++GC P+ VTYR ++ G+ + A+
Sbjct: 606 --LFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 29/348 (8%)
Query: 11 AHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A +++ M+ C N +F L G+ FDKAF L++ M PD +TYS
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRK-GFVPDTSTYS 292
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A +K L +M G+ P+ TY LID++ +A + + + +M S
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P V T + A+ + Q+ + + AG +P+ T+ L+D KAG+ K
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 188 SAVMEYM----------------QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
V + ++ + +VTY ++D +A + L M S
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKC 288
+P+ + +L+ + AGK + V + + + L+D GRL
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD- 531
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
MK VL M + C P+ VTY M+ G A + L+E+
Sbjct: 532 -LAMK-VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 577
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AHEL AM+ GC+ N + AL+ + ++G D A + M P
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC-GYLP 512
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+TY+ LI K D +LS M PN VTY +ID R +E L L
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE-SEKALKL 571
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ++ E C P+V T + G +G+ID + + G P+ T+ +L++
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-----GDLKQME 223
AG +K ++ M++ ++ + Y I F ++ G L++ME
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 126/337 (37%), Gaps = 47/337 (13%)
Query: 36 AYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
A + G + A ++E D + D + +I ++A FD+ + L M
Sbjct: 84 ALCKEGRWADALDMIER----EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 139
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN VTY TL+ + + K + + M++E C P+ N + ++ N K
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 156 YEKFQSAGIQPSINTFNILLDS-------------------YGK---------------- 180
+ + G P +NI + S YG+
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259
Query: 181 ------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
G F+K +++ M + + TY+ VI A +++ LF+ M+ +
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P T L+ ++ AG E+ + + + V + L+ AY + K +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ M GC+P+ VTY +V G N +K F+
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAG--NISKAFE 414
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + + +LF M +GC N ++ L++ +GL DKA LL MK T P
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY--WP 651
Query: 62 D-VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y I+ K+F +L +M + G P Y LID + +A E+ +
Sbjct: 652 KYLQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRL-EIAME 708
Query: 121 LVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L K + E + D ++A + Q++ + Y + G P ++ F L+
Sbjct: 709 LHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 43/332 (12%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPDVNTYSILIKS 72
LF M + G + + FT ++ + R G D A SLL+ MK+ +C D+ Y++ I
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKS--NCLHADIVLYNVCIDC 277
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVT-------------------------------- 100
KA D ++ + G+ P+ VT
Sbjct: 278 FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC 337
Query: 101 ---YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 157
YNT+I YG A F E L + + C P V NC L G G++ + +E
Sbjct: 338 AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE 397
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ + P+++T+N+L+D KAG E V + M++ ++T NI+ID +A
Sbjct: 398 EMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
L + +F M + P VT CSL+ G G+ + + + +SD + + V +
Sbjct: 457 KLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516
Query: 278 CLVDAYGRLKCFAEMKG--VLEVMQQRGCKPD 307
L+ ++ KC + G + + M RGC PD
Sbjct: 517 SLIKSF--FKCGRKEDGHKIFKEMIHRGCSPD 546
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 161/347 (46%), Gaps = 8/347 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KC + E H++F+ M+ GC + + A + ++G K +L E +K + PDV
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK-SRGFIPDV 582
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+YSILI +KA + L M QG +T YNT ID + ++ + L +
Sbjct: 583 MSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M ++ +P V T + ++D +E+ +S G++ ++ ++ L+D +GK G
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ +ME + + + + T+N ++DA +A ++ + F+ M++ + P+ +T
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ K K + + + +T+ + ++ + AE + E + G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Query: 304 CKPDKVTYRTMVR--AYSTNGMKNHAKEFQDLVEK----MDETCLAM 344
PD +Y ++ +YS M+ + K F++ K +TC+A+
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAY-KIFEETRMKGCNIHTKTCIAL 868
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 2/313 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + ++A+ L + GC + ++ +L+ G+ G +A E MK D P+
Sbjct: 349 GSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK--DAAPN 406
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
++TY++LI KA + + M G+ PN +T N +ID +AK E
Sbjct: 407 LSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFE 466
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M + C PD T + G G++D + YE+ + P+ + L+ S+ K G
Sbjct: 467 GMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
E + + M S + N +D +AG+ + LF ++S P ++
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ AG + + + +LDT +N +D + + + +LE M+ +
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646
Query: 303 GCKPDKVTYRTMV 315
G +P VTY +++
Sbjct: 647 GRQPTVVTYGSVI 659
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 146/338 (43%), Gaps = 5/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + + A + F + G + ++T+++ + D+A + E M+ + P
Sbjct: 278 FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNV-P 336
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
Y+ +I A FD+ +LL +G P+ + YN ++ G+ E T
Sbjct: 337 CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF 396
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M +D P++ T N + +G+++ K + + AG+ P++ T NI++D KA
Sbjct: 397 EEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKA 455
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ ++ E M S VT+ +ID G+ G + L+ M P+ V
Sbjct: 456 KKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVY 515
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SL++++ G+ E + + + + D N +D + + + + E ++
Sbjct: 516 TSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKS 575
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
RG PD ++Y ++ G A+E +L M E
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGF---ARETYELFYAMKE 610
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 148/356 (41%), Gaps = 36/356 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ ++A +F+ M + C + +F +L+ G+ G D A+ L E M ++ D P
Sbjct: 452 LCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS-DKIP 510
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y+ LIKS K + + +M +G P+ N +D +A +
Sbjct: 511 NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALF 570
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
++ S PDV + + + +G + + + G + +N +D + K+
Sbjct: 571 EEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKS 630
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G K ++E M+ T+VTY VID + L + LF +S ++ + V
Sbjct: 631 GKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIY 690
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR-------LKCFAEMKG 294
SL+ +G G+ ++ ++ + + + +NCL+DA + L CF MK
Sbjct: 691 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKN 750
Query: 295 V----------------------------LEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + MQ++G KP+ +TY TM+ + G
Sbjct: 751 LKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 134/337 (39%), Gaps = 5/337 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + ++A E+F+ M ++ ++ YG +G FD+A+SLLE K C
Sbjct: 312 VLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK-ARGCI 370
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V Y+ ++ K + +M PN TYN LID +A
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKV 429
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M P+V T+N + + ++D +E P TF L+D GK
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + E M V Y +I +F + G + +F+ M P
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L + + AG+ K ++ I + + D + ++ L+ + E + M+
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK 609
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++GC D Y T + + +G N A + L+E+M
Sbjct: 610 EQGCVLDTHAYNTFIDGFCKSGKVNKAYQ---LLEEM 643
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 1/270 (0%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y L+ K FD + +L +MS G P+T T LI + ++ E + M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P + A + + D M + + Q G + S++ F ++ + + G
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++++ M+ IV YN+ ID FG+AG + F ++S + P VT S+
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + ++ + ++ + + +N ++ YG F E +LE + RGC
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369
Query: 305 KPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
P + Y ++ G A + F+++
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEM 399
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 4/289 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+++ +LL ++ FD +L M + P T LI SC+K+ + L+
Sbjct: 129 EAYDSLLLVMAKNVKFDYFEQILGEM-SIAGFGPSTKTCIELILSCIKSNKLREGFDLIQ 187
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNS 146
M RP Y TLI A + +++ LTL + E E V +R F
Sbjct: 188 CMRKFKFRPAFSAYTTLIGALSSVQE-SDIMLTLFHQMQELGYEVSVHLFTTVIRVFARE 246
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++D ++ +S + I +N+ +D +GKAG + ++ + VTY
Sbjct: 247 GRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTY 306
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I + L + +F M R P +++ YG AGK ++ S+L
Sbjct: 307 TSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKA 366
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ + +NC++ G+ E E M ++ P+ TY ++
Sbjct: 367 RGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLI 414
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + ++A+ + + ++ +G N ++ LL A ++ ++A ++MKN P
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG-TP 755
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ TYSILI + F+K +M QG++PNT+TY T+I +A AE
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLF 815
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ + PD + N + S + K +E+ + G T LLD+ K
Sbjct: 816 ERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKD 875
Query: 182 GHFEKMSAV 190
E+ + V
Sbjct: 876 ECLEQAAIV 884
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL++ M +GC + ++ L+ + G A +L+ M+ C P++ TYS L
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK-GCAPNIVTYSTL 392
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ S + +D +A+L MS +G N+ YN +I A G+ E + +M S+ C
Sbjct: 393 LHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGC 452
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+PD+ T N + N+ Q+D E + G+ + T+N L+ + +G +++
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLR 512
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M + +V+YN +I A + G++ + L M ++ IKP+ + L+
Sbjct: 513 LANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELC 572
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AGK + + + N + D V +N L++ ++ +LE + PD V
Sbjct: 573 KAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIV 632
Query: 310 TYRTMV 315
TY ++
Sbjct: 633 TYNILI 638
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 141/335 (42%), Gaps = 11/335 (3%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C +A L M+ GC + ++ LL R+ D+A+++L +
Sbjct: 257 VLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV----- 311
Query: 59 CQPDVNTYSI--LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE 116
P+VN + +I+ CL + L M ++G P+ TYN L+ +
Sbjct: 312 --PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGS 369
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
L +M + C P++ T + L +F +G D ++ + G + +N ++
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
+ GK G ++ +++ M+ I TYN +I + + E++F + E +
Sbjct: 430 ALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVA 489
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ +T +L+ A H+G+ ++ + + LD V +N L+ A + +L
Sbjct: 490 NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
E M +G KP+ +Y ++ G A E
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q ++A +F +++EG AN ++ L+ A SG + + L M C DV +Y
Sbjct: 471 QMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV-LHGCPLDVVSY 529
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-KMFAEMELTLVKML 125
+ LIK+ K D+ LL +M T+GI+PN +YN LI+ +A K+ +EL+ +ML
Sbjct: 530 NGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS-KEML 588
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ PD+ T N + G EK + + P I T+NIL+ + K +
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648
Query: 186 KMS-----AVMEYMQKYHYSWTIVTYNIV 209
S AV + +W ++ N V
Sbjct: 649 DASMLLDKAVSGGIVPNERTWGMMVQNFV 677
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 133/341 (39%), Gaps = 33/341 (9%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
+S+ A+LS R+ A L M P T+ + ++ + ALL
Sbjct: 146 RSYNAVLSTLARADCHADALLLYRRMLRD-RVPPTTFTFGVAARALCRLGRARDALALLR 204
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
M+ G P+ V Y T+I A AE L +ML C DV T N + G
Sbjct: 205 GMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLG 264
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILL----------DSYGKAGHFEKMSAVM------ 191
+ + ++ G PS+ T+ LL ++Y G +++ VM
Sbjct: 265 HVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIR 324
Query: 192 ---------------EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
E M + TYNI++ + G + M + P
Sbjct: 325 GCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAP 384
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT +L+ ++ G + ++L + +++ +N ++ A G+ E ++
Sbjct: 385 NIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLV 444
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+ M+ +GCKPD TY T++ N + A+ F +L+E+
Sbjct: 445 QEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 121/290 (41%), Gaps = 8/290 (2%)
Query: 45 KAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+A LL+ M P +Y+ ++ + +A L M + P T T+
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186
Query: 105 IDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
A R + L M C PD + A G + ++ G
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 165 QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
+NTFN ++ GH + + +++ M + + ++VTY ++ R +Q +
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT---RQADE 303
Query: 225 LFRLM-RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ ++ R + + V L +++R GK + + + + D +N L+
Sbjct: 304 AYAMLGRVPEV--NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Query: 284 GRL-KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+L +C + ++ +L+ M+++GC P+ VTY T++ ++ NGM + A+ D
Sbjct: 362 CKLGRCGSAVR-MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A EL + M+++G + ++ L++ + G A +LLE + N + P
Sbjct: 571 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE-NVHP 629
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR 110
D+ TY+ILI K D LL + GI PN T+ ++ + R
Sbjct: 630 DIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 156/379 (41%), Gaps = 40/379 (10%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ EKA E+ + + G A+ + ++ Y R G +KA +E M++ +
Sbjct: 360 GLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF-GLR 418
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T++ LI DK + + M+ +G+ P+ TYNTLID YG+ F
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M +P+V + + G+I E G+ P+ +N+L+D
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + M + S T+VTYN++ID + G L + E + S P +T
Sbjct: 539 VGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDN---------------------------------- 266
SL+ Y +AG K + + N
Sbjct: 599 YNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQ 658
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+++ D V +N ++ Y + + + + M +G PDK+TY +++ + G ++
Sbjct: 659 MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSN 718
Query: 327 AKEFQDLVEKMDETCLAMK 345
K DLV M LA K
Sbjct: 719 IK---DLVNNMKAKELAPK 734
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 11/326 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A L + M G + +++ L R + A L E +
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ---ATEKGI 347
Query: 62 DVNTY--SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+N Y SIL+ K +K + +L + G+ + V YNT ++ Y R + L
Sbjct: 348 RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAIL 407
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
T+ +M S P+ T N + F + ++D E+ +K G+ PS+ T+N L+D YG
Sbjct: 408 TIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYG 467
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K F++ ++E M++ +V+Y +I+ + G + + E + R M + P+
Sbjct: 468 KLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQ 527
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
L+ G K+ LRF D S+I V +N L+D + E + L
Sbjct: 528 VYNMLIDGSCMVG---KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFL 584
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ G PD +TY +++ Y+ G
Sbjct: 585 TQITSSGHSPDVITYNSLISGYANAG 610
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 12/349 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L +C A EL++ ++G N + + LL+ + G +KA +L+
Sbjct: 326 LLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVAD 385
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V Y+ + + +K + M + G+RPN++T+N+LID + K + E +
Sbjct: 386 EV-IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM + P V T N + +G D + E+ + G++P++ ++ L++ K
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVT 240
G + V+ M YN++ID G +K + + +MRSE I P+ VT
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE-ISPTLVT 563
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK + L I +S D + +N L+ Y ++ G+ E M+
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK-RPD 348
G KP TY ++ S G+ +LVEK+ L M PD
Sbjct: 624 NLGIKPTVRTYHPLISGCSKEGI--------ELVEKLYNEMLQMNLLPD 664
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 37/320 (11%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ +KA E + M ++G + +++ L+ YG+ FD+ F +LE M+ +P+V +
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI-GVKPNVVS 493
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT--------------------------- 98
Y LI K + + +L DM +G+ PN
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553
Query: 99 --------VTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
VTYN LID + E E L ++ S PDV T N + + N+G +
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
YE ++ GI+P++ T++ L+ K G E + + M + + V YN +I
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI 672
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
+ G+ ++ L + M + I P +T SL+ + GK + ++ + ++
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732
Query: 271 LDTVFFNCLVDAYGRLKCFA 290
++ LV + LK F+
Sbjct: 733 PKADTYDILVKGHCDLKDFS 752
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 4/336 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K +A EL++ M +G + S + L S F K L ++N+ + D
Sbjct: 118 KSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENS-GFRTDT 176
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y+ I++ +K L M +G+RPN YN LI R K + E +
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + + + T N + + G++D K E+ + + P+I TFN LL K
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++++ M+ + TY+I+ D R D L+ + I+ + T
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ GK EK +L+ + ++ D V +N V+ Y R+ + +E M+ G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+P+ +T+ +++ + + A+E+ V+KM E
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEW---VKKMAE 449
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 44/325 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDAN----TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
G C+ EK + M DE C+ N ++ L+ Y + G D AF + E MK
Sbjct: 220 GLCR--EKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK-S 276
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-MFAEM 117
P++ T++ L+ K + ++LL +M G P+ TY+ L D R M
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM 336
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
EL + + + +T + L G+++ E+ +KF G+ +N ++
Sbjct: 337 EL-YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNG 395
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
Y + G K +E M+ + +T+N +ID F ++ + E + M + + PS
Sbjct: 396 YCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPS 455
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +N L+D YG+L F +LE
Sbjct: 456 VET-----------------------------------YNTLIDGYGKLCTFDRCFQILE 480
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNG 322
M++ G KP+ V+Y +++ +G
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDG 505
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 95/258 (36%), Gaps = 7/258 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M+GK K A F M+ ++ L+ + G +A L + ++
Sbjct: 538 MVGKVKD---ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH-S 593
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM-EL 119
PDV TY+ LI A K L M GI+P TY+ LI G +K E+ E
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS--GCSKEGIELVEK 651
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ML + PD N + + G ++ GI P T+N L+ +
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G + ++ M+ + TY+I++ D +R M P+
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771
Query: 240 TLCSLVRAYGHAGKPEKL 257
L G+ +++
Sbjct: 772 ICNELTAGLEQEGRLQEV 789
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 39/230 (16%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + +A + + G + ++ +L+S Y +G K L E MKN +
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL-GIK 628
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMST----------------------------- 91
P V TY LI C K + V+ L ++M
Sbjct: 629 PTVRTYHPLISGCSKE-GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687
Query: 92 ------QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
QGI P+ +TYN+LI + R + ++ + M +++ P T + ++ +
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCD 747
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
Y + P+ + N L + G +++ + M
Sbjct: 748 LKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMN 797
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +L+ M+ + + A++ Y G KA+SL + M + PD TY+
Sbjct: 647 ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQ-GIHPDKMTYNS 705
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ L+++M + + P TY+ L+ + K F+ + +M+ +
Sbjct: 706 LILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI 164
P+ N G++ ++ + GI
Sbjct: 766 FLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 1/288 (0%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
S+ +LL++ ++ +AF++ M + PDV +YSILI K + + L
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M PN TYN ++ R A+ + +M+S C PDV T + + F + +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
D + +E S G +P+ T+N LL K ++ + M + VTY
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
++ F G ++Q +F M S+ P V L++ + AGKP + + + + + +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ-RGCKPDKVTYRTMV 315
DTV N ++D + K + V E M+Q GC PD VTY +++
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 8/336 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + A L + M+ G + + + L++ ++ +A L+ M T +
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118
Query: 62 D-VNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+Y+ L+ S KA + A+ S M S + + P+ V+Y+ LID + + E
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+M+ +C P+V T N L G+I + YE+ SAG P + T++ L+ +
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFS 238
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
A ++ + E M VTYN ++ + + LFR M P V
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ + + GK E+ V + + D V +NCL+ + R E + + +VM
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
R CKPD V++ M+ S AK D VE
Sbjct: 359 VSRECKPDTVSHNIMIDGLSK------AKRLDDAVE 388
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 3/320 (0%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ A E+ M C N +++ L+ + R KA SLL M Q
Sbjct: 388 GYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER-KLQ 446
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ILI K LLS M+ G+ P+ TY+ ID + + E
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + + + + + + G++ +K SAG P+ T+N L+D Y K
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+F++ +++ M K TY I+ID + + Q +F M S P
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ + AY G+ + ++ ++ IM DT+ + +DAYGR G+L+ M
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686
Query: 301 QRGCKPDKVTYRTMVRAYST 320
+ GC+P TY +++ S
Sbjct: 687 EVGCEPSYYTYSCLIKHLSN 706
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 151/340 (44%), Gaps = 3/340 (0%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C K + A+ +F +M ++GC N S+T L+ + + D+A L M + +
Sbjct: 246 ILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM-HEDN 304
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P V TY+++I + + + + +M+ + +PN TY LI + F + +
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ML + P V T N + + G + + +S P+ T+N L+ +
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ + K +++ M + +VTYNI+I + GDL L LM + P
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T + G E+ S+ + I + V ++ L+D Y ++ ++ + +L+
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
M GC P+ +TY +++ Y A+ D++ K D
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 1/276 (0%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+ LI + D A+ M +G N V+Y LI + A+ E
Sbjct: 238 DTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLF 297
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M ++C P V T + A G+ +++ QP+++T+ +L+ S +
Sbjct: 298 SQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCED 357
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+F+ ++ M + ++VTYN +ID + + G + LM S P+ T
Sbjct: 358 SNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTY 417
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ + K S+L + + + V +N L+ + +L +M +
Sbjct: 418 NELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNE 477
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G PD+ TY + G+ A+ F+ L EK
Sbjct: 478 SGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ ++A L M+ + ++T L+ + FD+A + + M +T
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS-H 621
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV Y+ I + + L+ M+ +GI P+T+ Y IDAYGR
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----------------MEKCYE------ 157
L +M CEP +T +C ++ N+ + C+
Sbjct: 682 LKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEF 741
Query: 158 ------KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
K G P+ NT+ + K G E + ++M++ S YN ++
Sbjct: 742 TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLG 801
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKP---SC-VTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
+ G + +M R P SC + LC L G EK V
Sbjct: 802 CSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLY----DEGNDEKAKRVFCSFLQC 857
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ D + + L+D + + + +M+ +GC+ TY ++ +
Sbjct: 858 EYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 108/253 (42%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++L+ + D+++++ +M + PN T NT+++ Y + E EL + K++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
D +T + + + +D + + G + ++ L+ + +A +
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + M + + T+ TY ++I A + G + +F+ M + +P+ T L+
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ + +L + ++ V +N L+D Y + A +L +M+ C
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411
Query: 306 PDKVTYRTMVRAY 318
P+ TY ++ +
Sbjct: 412 PNARTYNELILGF 424
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 60/135 (44%)
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E + ++ + + + T+ YN+++ R + +M+ ++ M + + P+ TL +
Sbjct: 150 LEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNT 209
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+V Y G + + I + + LDT + L+ Y R K + M +G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 304 CKPDKVTYRTMVRAY 318
C ++V+Y ++ +
Sbjct: 270 CLRNEVSYTNLIHGF 284
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 148/314 (47%), Gaps = 1/314 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M +G ++ ++ +L+ ++G ++ LL+ M + P+V T+++
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM-TSRKIIPNVITFNV 280
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K + L +M T+GI PNT+TYN+L+D Y +E L M+ +
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T ++ + ++D K + K G+ + T++IL+ + ++G E
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M ++TY I++D G L++ +F ++ ++ V ++
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK E ++ + + + + + ++ + +E +L M++ G +P+
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520
Query: 309 VTYRTMVRAYSTNG 322
TY T++RA+ +G
Sbjct: 521 CTYNTLIRAHLRDG 534
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 39/365 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L MV+ GC N ++ ++++ +SG A LL M + + + DV TYS +
Sbjct: 153 EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM-DERNVKADVFTYSTI 211
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S + D +L +M T+GI+ + VTYN+L+ +A + + L M S
Sbjct: 212 IDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+V T N + F G++ + Y++ + GI P+ T+N L+D Y + +
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331
Query: 190 VMEYMQKYHYSWTI-----------------------------------VTYNIVIDAFG 214
+++ M + + S I VTY+I++ F
Sbjct: 332 MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++G L+ E LF+ M S + P +T L+ GK EK + + S + LD V
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 334
+ +++ + + + + +G KP+ +TY M+ G E L+
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG---SLSEANILL 508
Query: 335 EKMDE 339
KM+E
Sbjct: 509 RKMEE 513
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 142/277 (51%), Gaps = 3/277 (1%)
Query: 60 QPDVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD T++ LI CL++ + V L++ M G +PN VTYN++++ ++ +
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAV-VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLAL 190
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L KM + + DV+T + + + G ID +++ ++ GI+ S+ T+N L+
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGL 250
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KAG + +++ M ++T+N++ID F + G L++ L++ M ++ I P+
Sbjct: 251 CKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNT 310
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T SL+ Y + + ++L + ++ D V F L+ Y ++K E +
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK 370
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLV 334
+ +RG + VTY +V+ + +G A+E FQ++V
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+ + A +LFQ M+ + F+ S + F+ + M+ ++ T
Sbjct: 45 KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKME-LNGIAHNIYTL 103
Query: 67 SILI----KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+I+I + C FA+ ++L + G P+T T+NTLI+ +E + +
Sbjct: 104 NIMINCFCRCCKTCFAY----SVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ C+P+V T N + SG K ++ + T++ ++DS + G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ ++ + M+ ++VTYN ++ +AG L + M S +I P+ +T
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ + GK ++ + + + I +T+ +N L+D Y +E +L++M +
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339
Query: 303 GCKPDKVTYRTMVRAY 318
C PD VT+ ++++ Y
Sbjct: 340 NCSPDIVTFTSLIKGY 355
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 10/304 (3%)
Query: 39 RSGLFD----KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
RSG+ D A L + M ++ P P + +S F+ V M G
Sbjct: 38 RSGIVDIKEDDAIDLFQEMIRSRP--LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNG 95
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
I N T N +I+ + R L K++ EPD T N + ++
Sbjct: 96 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ G QP++ T+N +++ K+G ++ M + + + TY+ +ID+
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R G + LF+ M ++ IK S VT SLV AGK +L+ + + I+ +
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNV 275
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+ FN L+D + + E + + M +G P+ +TY +++ Y M+N E ++
Sbjct: 276 ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYC---MQNRLSEANNM 332
Query: 334 VEKM 337
++ M
Sbjct: 333 LDLM 336
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ELFQ MV G + ++ LL +G +KA + E ++ + D+ Y+I
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MNLDIVMYTI 455
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I+ K + L + +G++PN +TY +I + +E + L KM +
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
EP+ T N +RA G + K E+ +S G ++ +++D A
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ ++ +LF+ + G ANT +++ L+ + +SG + A L + M + PDV
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL-GVLPDV 415
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY IL+ +K + D+ + + V Y +I+ + +
Sbjct: 416 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCS 475
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + +P+V T + G + K + G +P+ T+N L+ ++ + G
Sbjct: 476 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGD 535
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
+ ++E M+ +S + +VID A
Sbjct: 536 LTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 13/337 (3%)
Query: 9 EKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
E+A ++ M E G + N ++A++ A G + +A L+ M+ D Y+
Sbjct: 429 ERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMREC-GLSADPVVYT 487
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQG--IRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
I +C K ++K LS + ++ +R YN I A G+AK ++ + M
Sbjct: 488 AAIGACEKFGQWEKALDTLSKLVSEKPPMRSLMWGYNAAISALGKAKQMEGIKDLVATMK 547
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +PD +T +RA G G + + + AG++P+ +N L+ S K E
Sbjct: 548 ASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRVVYNTLIASVLKGEQME 607
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K ++ M++ + TY ++ R D ++ E L M S +KP+ TL +++
Sbjct: 608 KADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALLSEMESFGVKPNSRTLTAVL 667
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV---MQQR 302
+ YG AG+ E+ ++ D S +++D + FN L+ G + + + VLE+ M+ R
Sbjct: 668 KVYGDAGEVERALALFEQYDASGMVMDVICFNTLM---GPVLKKDDPETVLELFSRMESR 724
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
G +PD +T ++RA G A L+EKM E
Sbjct: 725 GVEPDSLTMSLVLRAAEQAGAAEWA---WLLMEKMRE 758
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 44 DKAFSLLEHMKNTPDCQPDVNTYSILIK--SCLKAFAFDKVQALLSDMSTQGIRPNTVTY 101
D A L+E MK +PD+ TY L+ S D V L ++ G++PN++TY
Sbjct: 357 DFALGLMEEMKRE-GVEPDIITYGSLMSALSPRGLAGADIVLELFETLAKSGLKPNSITY 415
Query: 102 NTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+ I AYG + E LV M E EP+ + + ++A N GQ + ++ +
Sbjct: 416 VSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMR 475
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM--QKYHYSWTIVTYNIVIDAFGRAGD 218
G+ + + + K G +EK + + +K + YN I A G+A
Sbjct: 476 ECGLSADPVVYTAAIGACEKFGQWEKALDTLSKLVSEKPPMRSLMWGYNAAISALGKAKQ 535
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
++ ++ L M++ +KP T +++RA G G E+ S+L ++ + + + V +N
Sbjct: 536 MEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRVVYNT 595
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
L+ + + + + +L M++ G PD TY T++
Sbjct: 596 LIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIM 632
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
EG D + ++A++S Y G ++ A +L++ M D D TY + +C +A +
Sbjct: 227 EGLDLSA-VYSAVVSGYAVDGSWEDASALVDEMFAN-DVPRDEYTYCAAMNACKEAGKWM 284
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDA-----------------------------YGRA 111
+ A L M G+ PNT+ YNT+I A GR
Sbjct: 285 QAAAFLPRMREDGVPPNTIAYNTVIGACAFFGRPNKAWNNNRETSSFLRPTSTRENKGRG 344
Query: 112 KMFAEMELT---------LVKMLSEDCEPDVWTMNCTLRAFGNSG--QIDTMEKCYEKFQ 160
A+ E + + +M E EPD+ T + A G D + + +E
Sbjct: 345 LSPAQAEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADIVLELFETLA 404
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDL 219
+G++P+ T+ + +YG G +E+ ++ MQK H Y+ V+ A G
Sbjct: 405 KSGLKPNSITYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQW 464
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK-LGSVLRFIDNSDIMLDTVF-FN 277
K+ MR + V + + A G+ EK L ++ + + M ++ +N
Sbjct: 465 KRALETLDEMRECGLSADPVVYTAAIGACEKFGQWEKALDTLSKLVSEKPPMRSLMWGYN 524
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ A G+ K +K ++ M+ G KPD+ TY M+RA +G
Sbjct: 525 AAISALGKAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDG 569
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK KQ E +L M G + ++ A++ A G G +++++S+L M+ +P
Sbjct: 530 LGKAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQA-GVRP 588
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ Y+ LI S LK +K +L+ M G+ P+ TY T++ R + E L
Sbjct: 589 NRVVYNTLIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALL 648
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S +P+ T+ L+ +G++G+++ +E++ ++G+ + FN L+ K
Sbjct: 649 SEMESFGVKPNSRTLTAVLKVYGDAGEVERALALFEQYDASGMVMDVICFNTLMGPVLKK 708
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
E + + M+ +T ++V+ A +AG + L MR E
Sbjct: 709 DDPETVLELFSRMESRGVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREE 759
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 136/323 (42%), Gaps = 52/323 (16%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A F M GC N ++TALL AY +S +A + M C P+ TYS
Sbjct: 504 EQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA-CYPNAITYSA 562
Query: 69 LIKSCLKAFAFDKVQALLSDM----------------STQGIRPNTVTYNTLIDAYGRAK 112
LI KA K + + + T I PN VTY L++ +A+
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
++ L ML+ CEP+ + + F G+ID+ ++ + + G PS++T+
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYT 682
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D K G + V+ M K + +VTY ++D + G+ ++ L LM +
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +L+ G AGK VDA L+ F +M
Sbjct: 743 GCSPNVVTYTALIDGLGKAGK--------------------------VDA--GLELFMQM 774
Query: 293 KGVLEVMQQRGCKPDKVTYRTMV 315
K +GC P+ VTYR ++
Sbjct: 775 K-------TKGCAPNYVTYRILI 790
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 29/348 (8%)
Query: 11 AHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A ++++ M+ C NT +F L G+ F+KAF +++ M PD +TY+
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGK---FEKAFQIVKEMMRK-GFVPDASTYT 456
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I +A DK L +M G+ P+ TY LID++ +A + + + +M S
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P+V T L A+ S Q+ + + P+ T++ L+D KAG +K
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKA 576
Query: 188 SAVMEYM--------QKYHY--------SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
V + +++ S +VTY +++ +A + L M +
Sbjct: 577 CEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLA 636
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKC 288
+P+ + +LV + G+ + V + + + L+D GRL
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD- 695
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
MK VL M + C P+ VTY MV G A L+EK
Sbjct: 696 -LAMK-VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEK 741
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 18/338 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ AH+L AM+ GC+ N + AL+ + + G D A + M P
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC-GYLP 676
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+TY+ LI K D +LS M PN VTY ++D + E L L
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE-TEKALNL 735
Query: 122 VKMLS-EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ++ + C P+V T + G +G++D + + + ++ G P+ T+ IL++
Sbjct: 736 LSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCA 795
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR-----AGDLKQMEYLFRLMRSERIK 235
AG + +++ M++ H+ + Y + F + G L++ME S
Sbjct: 796 AGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEME-------SHDTA 848
Query: 236 PSCVTLCSLVRAYGHAGKPE---KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P L+ ++ AG+ E +L + + +S M L+ A E
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEA 908
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ M++RG PD + +V+ N A +
Sbjct: 909 VALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 133/370 (35%), Gaps = 45/370 (12%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L Q E A + + M G + + + A + G + A LLE D +
Sbjct: 213 VLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLER----EDFK 268
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D + +I ++A F++ + L M PN VTY TL+ + + K +
Sbjct: 269 LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRI 328
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY-G 179
+ M++E C P N + + N+ K + + + G P +NI + S G
Sbjct: 329 INMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICG 388
Query: 180 K----------------------------------------AGHFEKMSAVMEYMQKYHY 199
+ G FEK +++ M + +
Sbjct: 389 REELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGF 448
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
TY VI +A + + LF+ M+ + P T L+ ++ AG E+ S
Sbjct: 449 VPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQS 508
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ ++ + V + L+ AY + K + + M C P+ +TY ++
Sbjct: 509 WFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLC 568
Query: 320 TNGMKNHAKE 329
G A E
Sbjct: 569 KAGEIQKACE 578
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 1/313 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+G+ + KA + + MV+ N+ +F L+ + + A + E M+ + +P
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ-SQGLKP 336
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ L+ ++ + LL +M + ++PN +TYN LI+ Y + K+ E
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELF 396
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ + P+V T N L + G+++ + G P+ +T+N L+ + +
Sbjct: 397 DNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G E++ ++ MQ VTYNI+I A+ + K+ L M + +KPS +T
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ Y G ++ + ++ + V +N L+ Y R + G+L M +
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576
Query: 302 RGCKPDKVTYRTM 314
+G P++ TY +
Sbjct: 577 KGLIPNRTTYEII 589
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 157/326 (48%), Gaps = 4/326 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+++ M+ N +F +++ + G +KA +++ MK P+V TY+ LI
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMK-VWGFWPNVVTYNTLIDGY 275
Query: 74 LKAFAFDKV---QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K K+ A+L +M + PN+VT+N LID + + + + +M S+ +
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P V T N + N G+++ + ++ S+ ++P++ T+N L++ Y K E+ +
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + K + ++T+N ++ + + G +++ L ++M + P+ T L+ +
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
GK E++ ++L + + DTV +N L+ A+ K + +++ M +G KP +T
Sbjct: 456 EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y ++ Y G A + +EK
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEK 541
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 144/342 (42%), Gaps = 55/342 (16%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
L A+ R+G + S+L C P L+ + +K F V+ + +M +
Sbjct: 180 LEAFKRAGDYRYKLSVL-------SCNP-------LLSALVKENEFGGVEFVYKEMIRRK 225
Query: 94 IRPNTVTY-----------------------------------NTLIDAY---GRAKMFA 115
I PN +T+ NTLID Y GR
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + L +M+ P+ T N + F + K +E+ QS G++P++ T+N L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ G + +++ M + ++TYN +I+ + + L++ LF + + +
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ +T +L+ Y GK E+ + + + + + +NCL+ + R E+K +
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
L MQ RG K D VTY ++ A+ K K+ L+++M
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCE---KKEPKKAARLIDEM 504
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 3/223 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E+A ELF + +G N +F LL Y + G ++AF LL+ +
Sbjct: 382 GYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFL 440
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ +TY+ LI + ++V+ LL++M +G++ +TVTYN LI A+ K +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +ML + +P T N L + G + ++ + G ++ T+N+L+ Y +
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
G E + ++ M + TY I+ + G L +E
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
V + N L A + +E Y++ I P++ TFN +++ K G K V++
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254
Query: 193 YMQKYHYSWTIVTYNIVIDAF---GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
M+ + + +VTYN +ID + GR G + + + + + M ++ P+ VT L+ +
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF- 313
Query: 250 HAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
K E L + L+ + + + V +N LV+ E K +L+ M KP
Sbjct: 314 --CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
+ +TY ++ Y + A+E D + K T
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 152/325 (46%), Gaps = 13/325 (4%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT---------- 56
Q E+A + Q M + C T ++ L+ YG +G ++A L+ H+ N
Sbjct: 102 QMEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDG 161
Query: 57 --PDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
P +P++ T + L+ + + ++ +++ + + G++P+ VTYNTL AY A
Sbjct: 162 LEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRV 221
Query: 115 AEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL 174
AE+E + M + +P++ T + + +G + + + + G+ P + FN L
Sbjct: 222 AELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTL 281
Query: 175 LDSYGKAGHFE-KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L Y + + K+ V++ M + TY+ +++ + AG + + + M+ +R
Sbjct: 282 LKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDR 341
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
+KP L + Y +G+ + S+L+ + + + V + ++ + + +
Sbjct: 342 VKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDAL 401
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAY 318
VLE+M +RG P+ T +T+V +
Sbjct: 402 RVLELMLERGEAPNLNTVQTLVWGF 426
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 23/288 (7%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ-GIRPNTVTYNTLIDAYGRAKMFAEME 118
+P V Y++ I + + Q LL M + G+ P++V +NT+I+ + E
Sbjct: 48 RPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAM 107
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY-------------EKFQSAGIQ 165
+ +M ++C P T N ++ +G +GQ + ++ E +
Sbjct: 108 RVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVAR 167
Query: 166 PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYL 225
P++ T N LL+++ + G E+ V+ ++ VTYN + A+ AG + ++E L
Sbjct: 168 PNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDL 227
Query: 226 FRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG- 284
M++ R+KP+ T L+ Y G PE+ +L + + D V FN L+ Y
Sbjct: 228 IADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQ 287
Query: 285 ----RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+LK ++ VL++M G +PD TY T++ +S+ GM + A+
Sbjct: 288 ENDQQLK----LEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQ 331
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 15/328 (4%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
+G + + +T ++ +A LL+ M+ PD ++ +I +
Sbjct: 45 QGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQME 104
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML--------SED---- 128
+ ++ +M + RP T TYNTLI YG A + + ++ +L SED
Sbjct: 105 EAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEP 164
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
P++ TMN L A+ G+++ + +SAG+QP T+N L +Y AG ++
Sbjct: 165 VARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAEL 224
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ M+ + TY I+I + + G ++ L ++ E + P V +L++
Sbjct: 225 EDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKG 284
Query: 248 YGHAGKPE-KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y + KL VL + + + D ++ +++ + + + +L MQQ KP
Sbjct: 285 YSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKP 344
Query: 307 DKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
D + + + Y +G + A+ QD+
Sbjct: 345 DVRAFAILAKGYVRSGRTHEAESLLQDM 372
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 2/299 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + + G + ++ L AY +G + L+ MKN +P++ TY+I
Sbjct: 187 EEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNA-RLKPNLRTYAI 245
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAK-MFAEMELTLVKMLSE 127
LI + ++ LLS + +G+ P+ V +NTL+ Y + ++E+ L M +
Sbjct: 246 LISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAAN 305
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PDV T + + + ++G D + + Q ++P + F IL Y ++G +
Sbjct: 306 GVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEA 365
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++++ M + + +V Y +I + G + + LM P+ T+ +LV
Sbjct: 366 ESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVWG 425
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ A +P + ++ + + + +D+ + + A+ L E +L ++R P
Sbjct: 426 FCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGFPFETDRILASDRRRQLSP 484
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 151/330 (45%), Gaps = 3/330 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + +A + + M G A+T ++ ++ + R ++AF LL M+
Sbjct: 392 GLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKG-GIS 450
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TYSI+I + ++ LL M G++PN Y LI Y R F+ T
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACET 510
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM E+ PD++ N + N G++D + Y++ G QP+ T+ L+ Y
Sbjct: 511 LKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG+ EK ++ M + Y +++ + ++ +L+++ + M + + P
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ +G + SVL I+ + ++ D++ + L+ + + + G+L+ M
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++G +P Y ++ + + +HA+
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNI 720
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 1/327 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K + E A ++ + M + GC N ++ L+ R+G ++AF + M++ PD
Sbjct: 255 KVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDY-GLVPDG 313
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY +I K D+ + LL +MS G+ PN V Y+TLID + R E + +
Sbjct: 314 FTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M + +P+ T + +R G++ + ++ G T+N++++ + + +
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
E+ ++ M+K S + TY+I+I+ + G+ ++ L M ++ +KP+
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ Y G L+ + ++ D +N L+ + E + M ++G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+P+ TY ++ YS G A++
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 147/336 (43%), Gaps = 3/336 (0%)
Query: 3 GKCKQ--PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ P++A L M G N ++ L+ + R G D+AF +++ M + Q
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEM-SAAGVQ 380
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ TY LI+ K + +L M+ G +T+TYN +I+ + R E L
Sbjct: 381 PNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLL 440
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M P+V+T + + G+ + E+ + G++P+ + L+ Y +
Sbjct: 441 LNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCR 500
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G F ++ M + + + + YN +I G + + + M + +P+ T
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT 560
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y AG EK +L + NS + + + +++ Y + ++ L+ M
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSML 620
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
++G PD Y ++ S++G A ++EK
Sbjct: 621 EKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 129/322 (40%), Gaps = 3/322 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E+A L + M+ +G N + L+S Y R G F A L+ M +
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE-NLT 520
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y+ LI D+ +M +G +PN TY LI Y A + E
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML+ P+ + L + S ++ + + G+ P + I++ +
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+GH + +V+ ++K + Y +I F +A D+++ L M + I+P
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + + ++ I + + V + L+D Y + + + M
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML 760
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
G PD Y + S +G
Sbjct: 761 TEGVAPDAFVYSVLAAGCSNSG 782
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 24/305 (7%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
+F L + +GL+ +A LL+ M P +++ S +A +
Sbjct: 122 AFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPP------LVLSSVHRALSG--------- 166
Query: 89 MSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
S QG RP V + L+D Y GR + AE+ L L+K L P + N L+
Sbjct: 167 -SDQGRRP--VVLDVLVDTYKKTGRVRDGAEVVL-LMKDLG--LAPSLRCCNGLLKDLLR 220
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ +D + K + AGI P + T++ L+++Y K E V+E M++ S +VT
Sbjct: 221 ADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVT 280
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YN +I RAG +++ + M + P T +++ G+P++ +L +
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ +M + V ++ L+D + R E +++ M G +P+K+TY ++R G
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400
Query: 326 HAKEF 330
A
Sbjct: 401 RASRI 405
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 2/245 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK ++M+++G + + + ++ SG A S+L ++ PD Y
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN-GLVPDSLIYGS 668
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA +K LL +M+ +GI P YN LID + ++ + ++ +
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T + + +G I Y + + G+ P +++L +G ++
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQAL 788
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ E M Y+ I ++N ++ F + G L++ +M + I PS +T+ ++V
Sbjct: 789 FITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGL 847
Query: 249 GHAGK 253
G AGK
Sbjct: 848 GEAGK 852
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 3/249 (1%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M GI P+ TY+TLI+AY + + + + +M C +V T N + +G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNI 208
I+ ++ + G+ P T+ +++ K G ++ +++ M +V Y+
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD 268
+ID F R G+ + + + M + ++P+ +T +L+R G+ + +L+ +
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 269 IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
M DT+ +N +++ + R E +L M++ G P+ TY ++ G A
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA- 472
Query: 329 EFQDLVEKM 337
L+E+M
Sbjct: 473 --SGLLEQM 479
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 35/226 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A + + G ++ + +L+S + ++ +KA LL+ M +P ++ Y+
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK-GIEPGISCYNA 703
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ + + + + +G+ PN VTY TLID Y +A + +ML+E
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------------- 163
PD + + NSG + E+ + G
Sbjct: 764 VAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVK 823
Query: 164 ---------IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
I PS+ T ++ G+AG + + +Q+ + S
Sbjct: 824 FLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNAS 869
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Vitis vinifera]
Length = 1071
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 5/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + +KA E+F A+ EGC + + +++ AY + G ++A+ L E + +
Sbjct: 685 LYGKQHKLKKAIEVFSAI--EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGK-GIE 741
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V + S ++ + + + ++ G+ +TV YNT I+A A
Sbjct: 742 LGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSI 801
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN--TFNILLDSY 178
+M+S P + T N + +G ++D + + K + +G+ S++ T+ L+ Y
Sbjct: 802 YDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYY 861
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GKAG + S + MQ+ V+YNI+I+ + AG + + LF+ M + P
Sbjct: 862 GKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDS 921
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +L+RAY + K + + + N ++ V FN L+ A+ + E + V
Sbjct: 922 LTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 981
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
+ G PD YRTM+R Y
Sbjct: 982 LLSAGLSPDVACYRTMLRGY 1001
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 136/324 (41%), Gaps = 11/324 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA L +V G A S +L++ YG+ KA + ++ C Y +
Sbjct: 659 KAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIEG---CTSGKLIYISM 715
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + K ++ L +++ +GI V+ + ++ A E E + + +
Sbjct: 716 IDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGL 775
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
E D N + A +G++ Y++ S G+ PSI T+N ++ YG+ K+
Sbjct: 776 ELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRG---RKLDK 832
Query: 190 VMEYMQKYHYSWTIV-----TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+E K S V TY +I +G+AG + LFR M+ E IKP V+ +
Sbjct: 833 AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIM 892
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y AG + + + + D++ + L+ AY + F E + + MQ G
Sbjct: 893 INVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGV 952
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAK 328
P V + ++ A++ G A+
Sbjct: 953 LPSCVHFNQLLSAFAKAGFTEEAE 976
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 35/263 (13%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ + Y L+ YG+ E ++ML CEPD L + G+ M
Sbjct: 189 QPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLS 248
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-------QKYHYSWTI---- 203
Y Q GI PSI FN +L S K K+ + M + Y+ I
Sbjct: 249 FYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTVVISSLV 308
Query: 204 ------------------------VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
VTY+++I + G+ + L+ MR RI PS
Sbjct: 309 KDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNY 368
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SL+ Y G + S+ ++ + I+ D V + L+ YG+L + + + +
Sbjct: 369 TCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKET 428
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+Q G ++ TY M + + +G
Sbjct: 429 EQLGLLTNEKTYIAMAQVHLNSG 451
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 3 GKCKQPEKAHELFQAM--VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G+ ++ +KA E+F G + +++T L+S YG++G +A L M+ +
Sbjct: 825 GRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEE-GIK 883
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +Y+I+I A + Q L M G P+++TY LI AY ++ F E E T
Sbjct: 884 PGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEET 943
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M +E P N L AF +G + E+ Y SAG+ P + + +L Y
Sbjct: 944 IMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLD 1003
Query: 181 AGHFEK 186
G EK
Sbjct: 1004 YGCVEK 1009
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 5/329 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+GK K E+A F M++ GC+ + + +L Y R G S ++ P
Sbjct: 205 VGKIKLAEQA---FLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQER-GIIP 260
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ ++ ++ S K KV L +M +G+ PN+ TY +I + + + E T
Sbjct: 261 SIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTVVISSLVKDGLVEESFKTF 320
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P+ T + + +G D K YE + I PS T LL Y K
Sbjct: 321 YEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKN 380
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + ++ M+K V Y ++I +G+ G + E F+ + + T
Sbjct: 381 GDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTY 440
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++ + + ++G EK +++ + + +I + L+ Y + A + + + +
Sbjct: 441 IAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQALSK 500
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G PD + M+ Y + AK+F
Sbjct: 501 TGL-PDAGSCNDMLNLYIKLDLLEKAKDF 528
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 125/297 (42%), Gaps = 4/297 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + ++G + +T ++ ++A +G A S+ + M + P + TY+
Sbjct: 761 QEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSL-GVAPSIQTYNT 819
Query: 69 LIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I + DK + + S G+ + TY LI YG+A E L +M
Sbjct: 820 MISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQE 879
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +P + N + + +G ++ ++ G P T+ L+ +Y ++ F +
Sbjct: 880 EGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLE 939
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ MQ + V +N ++ AF +AG ++ E ++ + S + P +++R
Sbjct: 940 AEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLR 999
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
Y G EK + I S + D + V Y E +G+L+ M+ G
Sbjct: 1000 GYLDYGCVEKGITFFEQIRES-VEPDRFIMSSAVHFYKLAGKELEAEGILDSMKSLG 1055
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 16/325 (4%)
Query: 19 VDEGCDA----NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
VD+ +A NT + +L Y G K +L+ + T ++ S LI
Sbjct: 596 VDDTVEALNQNNTLALELMLGLYSEVGNACKVEEILKMLLKTAG---GLSVASHLISKFT 652
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS--EDCEPD 132
+ K Q L + G + +LI YG+ + +++ S E C
Sbjct: 653 REGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKA----IEVFSAIEGCTSG 708
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ A+ G+ + YE+ GI+ + + + ++ + G ++ V+
Sbjct: 709 KLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIR 768
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
+ V YN I+A AG L ++ M S + PS T +++ YG
Sbjct: 769 RSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGR 828
Query: 253 KPEKLGSVLRFIDNSDI--MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
K +K + S + LD + L+ YG+ E + MQ+ G KP KV+
Sbjct: 829 KLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS 888
Query: 311 YRTMVRAYSTNGMKNHAKE-FQDLV 334
Y M+ Y+T G+ + A+E FQ ++
Sbjct: 889 YNIMINVYATAGLHHEAQELFQAML 913
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/125 (18%), Positives = 54/125 (43%)
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
Y +++ Y I++ +G+ G +K E F M +P V +++ Y G+ + +
Sbjct: 188 YQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAML 247
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
S + I+ FN ++ + + ++ + M +G P+ TY ++ +
Sbjct: 248 SFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTVVISSL 307
Query: 319 STNGM 323
+G+
Sbjct: 308 VKDGL 312
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 4/324 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-Q 60
+ + +QPE+A EL + M + G + FT L+ A R G + A +L++ +K + C +
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGS--CLE 249
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ Y++ I KA D ++ +QG++P+ V+Y ++I +A +E E
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M +E P + N + +G++GQ + K ++ + G PS+ +FN +L GK
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
++ + E M+K TYNI+ID AG +++ + M + P+ +T
Sbjct: 370 KRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+ +V A K E + ++V + L+D G+ + + E M
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENML 488
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMK 324
G + V Y +++R + +G K
Sbjct: 489 DTGHNANPVVYTSLIRNFFMHGRK 512
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 153/385 (39%), Gaps = 72/385 (18%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G Q E A++L + + GC + SF ++L+ G+ D+A +L E MK D +P+
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK--DAEPN 390
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+TY+I+I A ++ + +M G+ PN +T N ++D +AK F
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTM------------------------------ 152
C P+ T + G G +D
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510
Query: 153 -----EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY-----SWT 202
K +++ G QP + N +D KAG EK A+ E ++ Y + S++
Sbjct: 511 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 570
Query: 203 IV------------------------------TYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I+ YN V+D F ++G L + + M+ +
Sbjct: 571 ILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK 630
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
R+ P+ T S++ + ++ + + I L+ + ++ L+D +G++ E
Sbjct: 631 RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRA 317
+LE M ++G P+ T+ +++ A
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDA 715
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 36/304 (11%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K Q + +F AM +G + +++ A++ + +SG DKA+ +LE MK P
Sbjct: 576 LTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK-VKRVPP 634
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY +I K D+ L + ++GI N + Y++LID +G+ E L L
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+ + P+V+T N + A + +I+ C++ + P+ T++IL++ +
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+ K + MQK +VTY +I + G++ LF ER K
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF-----ERFK------ 803
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+ G P D FN L++ E V E +
Sbjct: 804 -------ANGGTP-----------------DAASFNALIEGMSHANRAIEAYHVFEETRL 839
Query: 302 RGCK 305
+GC+
Sbjct: 840 KGCR 843
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 134/311 (43%), Gaps = 1/311 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E H++F+ M GC + + ++G +K ++ E +K PDV +YSI
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY-GFLPDVRSYSI 571
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + ++ M QG + YN ++D + ++ + L +M +
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P V T + ++D +E+ +S GI+ ++ ++ L+D +GK G ++
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++E M K + + T+N ++DA +A ++ + F+ M+ + P+ T L+
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
K K + + ++ + V + ++ ++ + + E + G PD
Sbjct: 752 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811
Query: 309 VTYRTMVRAYS 319
++ ++ S
Sbjct: 812 ASFNALIEGMS 822
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 42/344 (12%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
L+SA R+ D A ++ M+ +P + Y++LI + +A ++ LL M
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRL-KFRPAFSAYTVLIGAMAEARQPERALELLRQMQEV 211
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDT 151
G + TL+ A R E L LV + C EPD+ N + FG +G +D
Sbjct: 212 GYEVGVPLFTTLVRALAREGR-VEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270
Query: 152 MEKCYEKFQSAGIQPS-----------------------------------INTFNILLD 176
K + + +S G++P +N ++
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
YG AG FE +++ +++ ++V++N ++ G+ + + LF M+ + +P
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-AEP 389
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ T ++ AGK E+ + ++++ + + + N +VD + K F +
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 340
E QRGC P+ VTY +++ G K + + L E M +T
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGL---GKKGNVDDAYRLFENMLDT 490
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 136/332 (40%), Gaps = 8/332 (2%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + +A ELF M E ++ ++ YG +G F+ A+ LL+ +K C
Sbjct: 296 VLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER-GCI 354
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ ++ K D+ L M PN+ TYN +ID A E +
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMI 413
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA---GIQPSINTFNILLDS 177
+M P++ T+N + + + E YE F++A G P+ T+ L+D
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKF---EPAYEMFETASQRGCNPNSVTYCSLIDG 470
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
GK G+ + + E M ++ V Y +I F G + +F+ M +P
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
L + + AG EK ++ I + D ++ L+ + E +
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
M+Q+G D Y +V + +G + A E
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 16/291 (5%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE- 127
L+ + ++ D + +++ M RP Y LI A A+ E L L++ + E
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQ-PERALELLRQMQEV 211
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
E V +RA G+++ ++ + + ++P I +N+ +D +GKAG+ +
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 271
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ V+Y +I +AG L + E LF M +ER P +++
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
YG AG+ E +L + + V FN ++ G+ + E + E M ++ +P+
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPN 390
Query: 308 KVTYRTMV----------RAYSTNGMKNHAKEFQDLVE---KMDETCLAMK 345
TY ++ AY HA F +L+ +D C A K
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKK 441
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 3/256 (1%)
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
++ +L +MS G L+ A R + + E + M P +
Sbjct: 131 MEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIG 190
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
A + Q + + + Q G + + F L+ + + G E A+++ ++
Sbjct: 191 AMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEP 250
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
IV YN+ ID FG+AG++ F ++S+ +KP V+ S++ AG+ + +
Sbjct: 251 DIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ + +N ++ YG F +L+ +++RGC P V++ +++ +
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSIL---TCL 367
Query: 322 GMKNHAKEFQDLVEKM 337
G K E L E M
Sbjct: 368 GKKRKVDEALTLFEAM 383
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 157/337 (46%), Gaps = 6/337 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ E A+E+ M G N + +L + ++KA LL M +C
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK-NCP 333
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D T++IL+ + D+V LL M G P+ +TY T+I+ + + + E +
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 393
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M S C+P+ + L+ ++ + E+ + G P+ TFN +++ K
Sbjct: 394 LKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCK 453
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +++ M + +++Y+ VID G+AG ++ L +M ++ I P+ +T
Sbjct: 454 KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S+ A G+ +K+ + I ++ I D V +N ++ + + + L M
Sbjct: 514 YSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMV 573
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
GC P++ TY +++ ++ G+ A QDL+ ++
Sbjct: 574 SNGCMPNESTYTALIKGLASEGLLCEA---QDLLSEL 607
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 142/323 (43%), Gaps = 9/323 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLS---AYGRSG----LFDKAFSLLEHMKNTPD--C 59
++ E+ + + GC+A+ S+ A+L A R G L D+ + E + C
Sbjct: 203 DEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGC 262
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PD+ Y+ +I K + +LS M + G++PN V YNT++ A + + E
Sbjct: 263 TPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEE 322
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M ++C D T N + F +G +D + + E+ G P + T+ +++ +
Sbjct: 323 LLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 382
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ +++ M ++Y IV+ E L M + P+ V
Sbjct: 383 KEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPV 442
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ G E+ +L+ + + D + ++ ++D G+ E +L VM
Sbjct: 443 TFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVM 502
Query: 300 QQRGCKPDKVTYRTMVRAYSTNG 322
+G P+ +TY +M A + G
Sbjct: 503 INKGITPNVITYSSMAFALAREG 525
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 136/332 (40%), Gaps = 15/332 (4%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLE--HMKNTPDCQPDVNTYSI 68
A + M C + ++ + RSG + A +LE H K + D ++
Sbjct: 135 ALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGS---TLDTGNCNL 191
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL--------- 119
+I + D+ +L + G + V+YN ++ AK + ++E
Sbjct: 192 VINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVH 251
Query: 120 -TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M C PD+ + G + + + S G++P++ +N +L
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGI 311
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
A +EK ++ M + + VT+NI++D F + G + ++ L M P
Sbjct: 312 CSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 371
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +++ + G ++ +L+ + + +T+ + ++ + + + + ++
Sbjct: 372 ITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSR 431
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M Q+GC P+ VT+ T++ G+ A E
Sbjct: 432 MIQQGCLPNPVTFNTIINFLCKKGLVEQAIEL 463
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 107/280 (38%), Gaps = 47/280 (16%)
Query: 94 IRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCEP--------------------- 131
+ PN TY ++ GR ++ A+ L +M S C P
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRI-ADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA 170
Query: 132 --------------DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
D N + A + G +D + K G + I ++N +L
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKG 230
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWT----------IVTYNIVIDAFGRAGDLKQMEYLFR 227
A + + +M+ M K H + + I Y +ID + G + +
Sbjct: 231 LCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
M S +KP+ V ++++ A + EK +L + + LD V FN LVD + +
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNG 350
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ +LE M + GC PD +TY T++ + G+ + A
Sbjct: 351 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 390
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A EL M+++G N +++++ A R G DK + +++++ +
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDA-TIRS 544
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D Y+ +I S K D L+ M + G PN TY LI + E +
Sbjct: 545 DAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ--- 601
Query: 122 VKMLSEDC 129
+LSE C
Sbjct: 602 -DLLSELC 608
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 6/312 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M +GC + ++ ++S + D+A +L M P +Y+ ++
Sbjct: 178 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV 231
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + F +V +++SDM +G++PN +TY T++DA+ +A L +M+ C
Sbjct: 232 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 291
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T +R + G++ + + G PS ++NIL+ G + S++
Sbjct: 292 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 351
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+++ + TY+ +ID F +AGDL ++ M KP+ V ++V +
Sbjct: 352 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 411
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ S++ + + +TV FN L+ + + GV M++ GC P+ T
Sbjct: 412 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 471
Query: 311 YRTMVRAYSTNG 322
Y ++ G
Sbjct: 472 YNELIHGLFREG 483
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 1/311 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++++ MV EG +T S+ L+ G A S+L M+ C P+V TYS LI
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLI 371
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ +DMS G +PN V Y ++D + + MF + + + KML E+C
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N +R+ + ++ + + + G P+ T+N L+ + G+ +
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 491
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ MQ + ++VTYN V+ + ++ M + I+P+ T +++ AY
Sbjct: 492 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 551
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ +L ++ + + + + L+ + L M G P+ VT
Sbjct: 552 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 611
Query: 311 YRTMVRAYSTN 321
+ +VR N
Sbjct: 612 WNVLVRGVFRN 622
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 5/273 (1%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P+V TY++L+++ + + +L +M+ +G P+ VTY T++ + E
Sbjct: 156 HPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATE 215
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M P + N + A ++ + G+QP++ T+ ++D++
Sbjct: 216 VLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFC 270
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KAG A++ M + +VT+ ++ G + ++R M +E PS V
Sbjct: 271 KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTV 330
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ L+R G + S+L ++ + ++ L+D + + + M
Sbjct: 331 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 390
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ GCKP+ V Y MV + M N AK D
Sbjct: 391 SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 423
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+M G+ PN TYN L+ A + L +M + C PD T +
Sbjct: 149 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL---C 205
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
++D +++ E A + P ++N ++ + + +++ +V+ M ++TY
Sbjct: 206 KLDRLDEATEVL--AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 263
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++DAF +AG+L+ + M P+ VT +LVR G+ + R++
Sbjct: 264 TIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE 323
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
TV +N L+ + +L M+Q GC P+ TY T++ +S G
Sbjct: 324 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 7/177 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L C++ +A +F M GC N +++ L+ R G A ++ M+ + +
Sbjct: 444 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQ-SHGIEL 502
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
+ TY+ ++ + + + M QGI+PN T++ +I AY G +M A M
Sbjct: 503 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM- 561
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L M +C ++ + N ++ K GI P+ T+N+L+
Sbjct: 562 --LGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 616
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K K +EL + + ++ + SG D A+++++ M C+P+V
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEM-GASGCRPNVVI 457
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LIK+ L+ F +L +M QGI P+T YN+LI +AK E L++M+
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD +T + + +G+ + +K ++ G+ P+ L++ Y K G
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + M + TY ++++ + G + E +F MR + I P + +L+
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ G +K S+ + + + + + +N L+ + R + K +L+ M +G
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQ 331
P+ VTY T++ Y +G + A+ FQ
Sbjct: 698 PNAVTYCTIIDGYCKSG--DLAEAFQ 721
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 142/342 (41%), Gaps = 37/342 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A+ + + M GC N +T L+ + + F A +L+ M+ PD Y+
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQ-GIAPDTFCYNS 495
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS-- 126
LI KA D+ ++ L +M G +P+ TY I Y A FA + + +ML
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555
Query: 127 ----------------------EDCEP-----------DVWTMNCTLRAFGNSGQIDTME 153
E C D T + +G+++ E
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + + + GI P + ++ L+D + K G+ +K S++ + M + + ++ YN+++ F
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGF 675
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
R+G++++ + L M + P+ VT C+++ Y +G + + + ++ D+
Sbjct: 676 CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ LVD RL + E ++GC + ++
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALI 776
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 164/366 (44%), Gaps = 28/366 (7%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A E+F M +G + S+ L+ + + G KA S+ + M
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA-GLTS 663
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V Y++L+ ++ +K + LL +MS +G PN VTY T+ID Y ++ AE
Sbjct: 664 NVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLF 723
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS--AGIQPSINTFNILLDSYG 179
+M + PD + + +++ +E+ F++ G S FN L++
Sbjct: 724 DEMKLKGLVPDSFVYTTLVDG---CCRLNDVERAITIFETNEKGCASSSAPFNALINWVF 780
Query: 180 KAGHFEKMSAVMEYMQKYHYSW----TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
K G E + ++ + + VTYNI+ID + G+L+ + LF M+ +
Sbjct: 781 KFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLM 840
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ +T SL+ Y G+ ++ SV + + I D + ++ +++A+ + + +
Sbjct: 841 PTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVL 900
Query: 296 LEVMQQR-----GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD-------------LVEKM 337
L+ M + GCK T R ++ ++ G A++ + ++E +
Sbjct: 901 LDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELI 960
Query: 338 DETCLA 343
+E+C++
Sbjct: 961 NESCIS 966
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 18/339 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM------KN 55
L K K+ ++A MV+ G + ++ A +S Y +G F A ++ M N
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559
Query: 56 TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
C +N Y C K + A S M QGI + TY L++ +
Sbjct: 560 KVLCTGLINEY------CKKGKVIEACSAFRS-MVEQGILGDAKTYTVLMNGLVKNGKVN 612
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ E +M + PDV++ + F G + +++ AG+ ++ +N+LL
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ ++G EK +++ M + VTY +ID + ++GDL + LF M+ + +
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEM 292
P +LV E+ ++ + + FN L++ +G+ + +M
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIFE-TNEKGCASSSAPFNALINWVFKFGKTELTTDM 791
Query: 293 -KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+++ + KP+ VTY M+ G AKE
Sbjct: 792 INRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKEL 830
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 133/331 (40%), Gaps = 5/331 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDC 59
G CKQ E A L M G A+ +++ L+ + D A L+ M +
Sbjct: 289 GLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSI 348
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
P + Y I + S K A +K +AL M T G+ P Y +LI+ + R K +
Sbjct: 349 DPMMYDYFICVMS--KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYE 406
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
LV++ + +T ++ +SG +D ++ ++G +P++ + L+ ++
Sbjct: 407 LLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFL 466
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ F V++ M++ + YN +I +A + + M KP
Sbjct: 467 QKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAF 526
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + + Y AG+ ++ + ++ + V L++ Y + E M
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSM 586
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++G D TY ++ NG N A+E
Sbjct: 587 VEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 123/328 (37%), Gaps = 37/328 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA LF M+ G +++ +L+ + R K + LL +K + TY
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKR-NIVISPYTYGT 425
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+K + D ++ +M G RPN V Y TLI + + F + L +M +
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD + CY N L+ KA ++
Sbjct: 486 IAPDTF--------------------CY---------------NSLIIGLSKAKKMDEAR 510
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M + + TY I + AG+ + + M + P+ V L+ Y
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + S R + I+ D + L++ + + + + M+ +G PD
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630
Query: 309 VTYRTMVRAYSTNG-MKNHAKEFQDLVE 335
+Y T++ +S G M+ + F ++V+
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 128/318 (40%), Gaps = 15/318 (4%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
++++ MV+ + QS+ L+ A+ R G A +L + ++ T ++ +
Sbjct: 210 DVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK------TEEELGTATLNV-- 261
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
D+ L MS +G+ P+ +YN LID + K + + LV+M S D
Sbjct: 262 -------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ + D + S G ++ + K G EK A+ +
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFD 374
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M + + Y +I+ F R ++++ L ++ I S T + V+ +G
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSG 434
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ ++++ + S + V + L+ + + F + VL+ M+++G PD Y
Sbjct: 435 DLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494
Query: 313 TMVRAYSTNGMKNHAKEF 330
+++ S + A+ F
Sbjct: 495 SLIIGLSKAKKMDEARSF 512
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 5/320 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ GK + +KA E+F A+ EGC + + +++ AY + G ++A+ L E + +
Sbjct: 619 LYGKQHKLKKAIEVFSAI--EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGK-GIE 675
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
V + S ++ + + + ++ G+ +TV YNT I+A A
Sbjct: 676 LGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSI 735
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSIN--TFNILLDSY 178
+M+S P + T N + +G ++D + + K + +G+ S++ T+ L+ Y
Sbjct: 736 YDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYY 795
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
GKAG + S + MQ+ V+YNI+I+ + AG + + LF+ M + P
Sbjct: 796 GKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDS 855
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T +L+RAY + K + + + N ++ V FN L+ A+ + E + V
Sbjct: 856 LTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 915
Query: 299 MQQRGCKPDKVTYRTMVRAY 318
+ G PD YRTM+R Y
Sbjct: 916 LLSAGLSPDVACYRTMLRGY 935
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 136/324 (41%), Gaps = 11/324 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA L +V G A S +L++ YG+ KA + ++ C Y +
Sbjct: 593 KAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIEG---CTSGKLIYISM 649
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + K ++ L +++ +GI V+ + ++ A E E + + +
Sbjct: 650 IDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGL 709
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
E D N + A +G++ Y++ S G+ PSI T+N ++ YG+ K+
Sbjct: 710 ELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRG---RKLDK 766
Query: 190 VMEYMQKYHYSWTIV-----TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+E K S V TY +I +G+AG + LFR M+ E IKP V+ +
Sbjct: 767 AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIM 826
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y AG + + + + D++ + L+ AY + F E + + MQ G
Sbjct: 827 INVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGV 886
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAK 328
P V + ++ A++ G A+
Sbjct: 887 LPSCVHFNQLLSAFAKAGFTEEAE 910
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 14/242 (5%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+P+ + Y L+ YG+ E ++ML CEPD L + G+ M
Sbjct: 189 QPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLS 248
Query: 155 CYEKFQSAGIQPSINTFNILLDS------YGKA--------GHFEKMSAVMEYMQKYHYS 200
Y Q GI PSI FN +L S +GK G E+ M+ +
Sbjct: 249 FYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFV 308
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
VTY+++I + G+ + L+ MR RI PS T SL+ Y G + S+
Sbjct: 309 PEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSL 368
Query: 261 LRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
++ + I+ D V + L+ YG+L + + + + +Q G ++ TY M + +
Sbjct: 369 FSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLN 428
Query: 321 NG 322
+G
Sbjct: 429 SG 430
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 3 GKCKQPEKAHELFQAM--VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G+ ++ +KA E+F G + +++T L+S YG++G +A L M+ +
Sbjct: 759 GRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEE-GIK 817
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P +Y+I+I A + Q L M G P+++TY LI AY ++ F E E T
Sbjct: 818 PGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEET 877
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++ M +E P N L AF +G + E+ Y SAG+ P + + +L Y
Sbjct: 878 IMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLD 937
Query: 181 AGHFEK 186
G EK
Sbjct: 938 YGCVEK 943
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 125/297 (42%), Gaps = 4/297 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + ++G + +T ++ ++A +G A S+ + M + P + TY+
Sbjct: 695 QEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSL-GVAPSIQTYNT 753
Query: 69 LIKSCLKAFAFDKVQALLSDM--STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I + DK + + S G+ + TY LI YG+A E L +M
Sbjct: 754 MISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQE 813
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +P + N + + +G ++ ++ G P T+ L+ +Y ++ F +
Sbjct: 814 EGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLE 873
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ MQ + V +N ++ AF +AG ++ E ++ + S + P +++R
Sbjct: 874 AEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLR 933
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
Y G EK + I S + D + V Y E +G+L+ M+ G
Sbjct: 934 GYLDYGCVEKGITFFEQIRES-VEPDRFIMSSAVHFYKLAGKELEAEGILDSMKSLG 989
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 12/310 (3%)
Query: 33 LLSAYGRSGLF-DKAF--SLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
L+ G +GLF D F +L +K ++ S LI + K Q L +
Sbjct: 542 LIQEMGTNGLFKDSEFIQTLSLILKMLLKTAGGLSVASHLISKFTREGDISKAQNLNDQL 601
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS--EDCEPDVWTMNCTLRAFGNSG 147
G + +LI YG+ + +++ S E C + A+ G
Sbjct: 602 VKLGRGAEDASIASLITLYGKQHKLKKA----IEVFSAIEGCTSGKLIYISMIDAYAKCG 657
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ + YE+ GI+ + + + ++ + G ++ V+ + V YN
Sbjct: 658 KAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYN 717
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I+A AG L ++ M S + PS T +++ YG K +K + S
Sbjct: 718 TFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCS 777
Query: 268 DI--MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
+ LD + L+ YG+ E + MQ+ G KP KV+Y M+ Y+T G+ +
Sbjct: 778 GVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHH 837
Query: 326 HAKE-FQDLV 334
A+E FQ ++
Sbjct: 838 EAQELFQAML 847
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 134/318 (42%), Gaps = 22/318 (6%)
Query: 30 FTALLSAYGRSG---LFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+T LL YG+ G L ++AF LE ++ C+PD ++ + + + +
Sbjct: 195 YTILLRVYGQVGKIKLAEQAF--LEMLE--AGCEPDEVACGTMLCTYARWGRHKAMLSFY 250
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVK--MLSEDCE-----------PD 132
S + +GI P+ +N ++ + + + + ++ +LVK ++ E + P+
Sbjct: 251 SAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFVPE 310
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
T + + +G D K YE + I PS T LL Y K G + + ++
Sbjct: 311 EVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFS 370
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M+K V Y ++I +G+ G + E F+ + + T ++ + + ++G
Sbjct: 371 EMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSG 430
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
EK +++ + + +I + L+ Y + A + + + + G PD +
Sbjct: 431 NFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQALSKTGL-PDAGSCN 489
Query: 313 TMVRAYSTNGMKNHAKEF 330
M+ Y + AK+F
Sbjct: 490 DMLNLYIKLDLLEKAKDF 507
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/350 (17%), Positives = 136/350 (38%), Gaps = 24/350 (6%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A + F+ G N +++ A+ + SG F+KA +++E M++ +
Sbjct: 392 GKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSR-NIWFS 450
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+Y +L++ + +A +S G+ P+ + N +++ Y + + + + +
Sbjct: 451 RFSYIVLLQCYVMKEDLASAEATFQALSKTGL-PDAGSCNDMLNLYIKLDLLEKAKDFIF 509
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGI---QPSINTFNILL---- 175
++ + E D+ ++ + G + ++ ++ + G+ I T +++L
Sbjct: 510 QIRKDPVEFDMELCKTVMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTLSLILKMLL 569
Query: 176 -------------DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
+ + G K + + + K + +I +G+ LK+
Sbjct: 570 KTAGGLSVASHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKA 629
Query: 223 EYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
+F + E + S++ AY GK E+ + + I L V + +V A
Sbjct: 630 IEVFSAI--EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHA 687
Query: 283 YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
E + V+ + G + D V Y T + A G + A D
Sbjct: 688 LANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYD 737
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 148/360 (41%), Gaps = 39/360 (10%)
Query: 1 MLGKCK--QPEKAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
+LG C+ A ++F M E C N+ S++ L+ G ++AF L + M
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM-GEK 295
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
CQP TY++LIK+ DK L +M +G +PN TY LID R E
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
KM+ + P V T N + + G++ + + +P++ TFN L++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ G K +++ M S IV+YN++ID R G + L M I+P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR----------LK 287
C+T +++ A+ GK + + L + I LD V L+D + L+
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Query: 288 CFAEMK--------GVLEVMQQRGCK-----------------PDKVTYRTMVRAYSTNG 322
+M+ V+ M +GCK P VTY T+V +G
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 4/337 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ + E+A+ + + MV + + ++ AL++ Y + G AF LL M+ C+
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CK 403
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V T++ L++ + K LL M G+ P+ V+YN LID R
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M D EPD T + AF G+ D GI T L+D K
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G ++E + K T + N+++D + +K+ + + + PS VT
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+LV +G +L + S + + + +++ + E + +L MQ
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
G P+ VTY MV+ Y NG + A E + +VE+
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 134/326 (41%), Gaps = 36/326 (11%)
Query: 10 KAHELFQA-MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+A E+F + ++ G ++ T+LL + R A + + M C P+ +YSI
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + ++ L M +G +P+T TY LI
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI----------------------- 308
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+A + G ID +++ G +P+++T+ +L+D + G E+ +
Sbjct: 309 ------------KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V M K +++TYN +I+ + + G + L +M KP+ T L+
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GKP K +L+ + ++ + D V +N L+D R +L M +PD
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLV 334
+T+ ++ A+ G + A F L+
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLM 502
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 3/285 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C+ +P KA L + M+D G + S+ L+ R G + A+ LL M N D
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFD 471
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
+PD T++ +I + K D A L M +GI + VT TLID + +
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L ++ ++N L ++ K G+ PS+ T+ L+D
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
++G ++E M+ + Y I+I+ + G +++ E L M+ + P+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
VT +V+ Y + GK ++ +R + L+ ++ L+ +
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 163/376 (43%), Gaps = 38/376 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A L + + + G N + AL+ + + FD+A L + M C
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV TYSILI + D + L +M G++P+ YN+LI+ + + + E +
Sbjct: 402 DV-TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLM 460
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M+++ EP V T + + + G+I+ + Y + GI PSI TF LL +A
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRA 520
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERI------ 234
G + M +++ VTYN++I+ + G++ K E+L ++ +
Sbjct: 521 GLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSY 580
Query: 235 KPSCVTLC----------------------------SLVRAYGHAGKPEKLGSVLRFIDN 266
+P LC L+ + GK E+ SV + +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGL 640
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ LD V + L+D + K G+L+ M RG KPD V Y +M+ A S G
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 327 AKEFQDLVEKMDETCL 342
A DL+ ++E C+
Sbjct: 701 AFGIWDLM--INEGCV 714
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 4/333 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K +A E+ M GCD N + L+ + +A + + + + +PDV T
Sbjct: 241 KDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-ELKPDVVT 299
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y L+ K F+ ++ +M P+ ++L++ R + E L LVK +
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGL-RKRGKVEEALNLVKRV 358
Query: 126 SE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+E P+++ N + + D E +++ G+ P+ T++IL+D + + G
Sbjct: 359 AEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + + M ++ YN +I+ + GD+ E L M +++++P+ VT SL
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ Y GK K + + I+ F L+ R + + M +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF-QDLVEK 336
KP++VTY M+ Y G + A EF +++EK
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 11/320 (3%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A + C+ N +T LL + R G ++A S+ + M D+ Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDM-GLRGVDLDLVCY 650
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+LI LK LL +M +G++P+ V Y ++IDA + F E M++
Sbjct: 651 GVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA-GHFE 185
E C P+ T + +G ++ E K + P+ T+ LD K G +
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMK 770
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
K + + K + T TYN++I F R G +++ L M + + P C+T +++
Sbjct: 771 KAVELHNAILKGLLANT-ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEV---MQQ 301
+K + + I D V +N L+ C A EM E+ M +
Sbjct: 830 SELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC----CVAGEMGKATELRNEMLR 885
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
+G KP+ T T + S++
Sbjct: 886 QGLKPNTETSETTISNDSSS 905
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 125/328 (38%), Gaps = 38/328 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK A L M+++ + ++T+L+ Y G +KA L M
Sbjct: 446 GHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIV 504
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + T++ L+ +A L ++M+ ++PN VTYN +I+ Y ++
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M+ + PD ++ + +GQ + + + + + LL + +
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ +V + M +V Y ++ID + D K L + M +KP
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKP---- 680
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
D V + ++DA + F E G+ ++M
Sbjct: 681 -------------------------------DDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
GC P++VTY ++ G N A+
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 142/357 (39%), Gaps = 40/357 (11%)
Query: 10 KAHELFQAMVD--EGCD-ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
K E+F A+ E C +++ SF L+ Y RS + + M P+V T
Sbjct: 136 KPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTL 195
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
S L+ +K F L DM GIRP+ Y +I + K + + +V+M +
Sbjct: 196 SALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEA 255
Query: 127 EDCEPDVWTMNCTLRAF-----------------GNSGQIDTMEKC--------YEKFQS 161
C+ ++ N + G + D + C ++F+
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFE- 314
Query: 162 AGIQ-----------PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
G++ PS + L++ K G E+ +++ + ++ S I YN +I
Sbjct: 315 VGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALI 374
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
D+ + + + E LF M + P+ VT L+ + GK + S L + + +
Sbjct: 375 DSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLK 434
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+N L++ + + + + ++ M + +P VTY +++ Y + G N A
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q E+A EL M+ +G + ++T ++S R KA L M +
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM-TEKGIR 854
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
PD Y+ LI C A K L ++M QG++PNT T T I
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 155/323 (47%), Gaps = 6/323 (1%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS-CLKA 76
+V G + SF +++S + G A ++ M C+PDV +Y+ LI C
Sbjct: 47 LVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRF-GCEPDVISYNSLIDGHCRNG 105
Query: 77 FAFDKVQALLSDMSTQGI--RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
L S ++ G +P+ V++NTL + + + KM E+ + + ML + C P+V
Sbjct: 106 DIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML-KCCSPNVV 164
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + + F SG++ K + + + P++ TF L+D Y KAG E + ++ E M
Sbjct: 165 TYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEM 224
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
++ S +VTY +ID F + G++++ ++ M +R++P+ + +++ + G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDS 284
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+ L + N + LD + ++ + E ++E M++ PD + + TM
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTM 344
Query: 315 VRAYSTNG-MKNHAKEFQDLVEK 336
+ AY +G MK + L+E+
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIER 367
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 125/348 (35%), Gaps = 11/348 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E L++ M N ++TAL+ + + G +A + M +
Sbjct: 207 GYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLE-DRVE 265
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ Y+ +I + D L+ M QG+R + Y +I E
Sbjct: 266 PNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEI 325
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M D PD+ + A+ SG++ Y K G +P + + ++D K
Sbjct: 326 VEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + A+ + + V Y ++IDA + D ++E LF + + P
Sbjct: 386 NGQLHE--AISYFCTE---KANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFM 440
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S + G + + + LD + L+ E + V + M
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEML 500
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ G PD + ++RAY G A DL+ M LA D
Sbjct: 501 RSGVCPDSAVFDLLIRAYEKEGNMTTA---SDLLLDMQTRGLARAVSD 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 105/284 (36%), Gaps = 39/284 (13%)
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
LS + P+ VT N I + A L ++S P + N +
Sbjct: 8 FLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVC 67
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT-- 202
GQ+ G +P + ++N L+D + + G V+E ++ Y +T
Sbjct: 68 KLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRA-SYGFTCK 126
Query: 203 ------------------------------------IVTYNIVIDAFGRAGDLKQMEYLF 226
+VTY+ ID F ++G+LK F
Sbjct: 127 PDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSF 186
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
M+ + + P+ VT L+ Y AG E + S+ + + L+ V + L+D + +
Sbjct: 187 NCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G+ M + +P+ + Y T++ + G ++A +F
Sbjct: 247 GEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKF 290
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD----- 58
K KQ +A+++F MVD GC N ++ AL+ ++G KAF + + T D
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429
Query: 59 ----CQ------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
C+ P+V TY L+ KA D LL M + G PN + Y+ LID +
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+A + ++M P V T + G++D K + P++
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 549
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
T+ ++D + G EK ++ M++ S +VTY +ID G+AG + LF
Sbjct: 550 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M + P+ VT L+ AG +K +L + + + C + + K
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KS 667
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+LE M+ G P Y ++ +S G A E
Sbjct: 668 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 710
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 140/336 (41%), Gaps = 52/336 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A LF+ M GC ++TAL+ AY ++ +A + M + C+P+ TY
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA-GCRPNDVTYGA 398
Query: 69 LIKSCLKAF----AFDKVQALLSDMST------------QGIRPNTVTYNTLIDAYGRAK 112
L+ KA AF+ L+ + + PN VTY L+D +A
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 113 MFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
L MLS CEP+ + + F +G+ID+ ++ + + G PS++T+
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+D K G + V+ M K + +VTY +ID R G+ ++ L LM +
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
P+ VT +L+ G AGK D+ LD
Sbjct: 579 GCSPNVVTYTALIDGLGKAGK-------------IDLSLD-------------------- 605
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+ M ++GC P+ VTYR ++ G+ + A+
Sbjct: 606 --LFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 29/348 (8%)
Query: 11 AHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A +++ M+ C N +F L G+ FDKAF L++ M PD +TYS
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRK-GFVPDTSTYS 292
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I A +K L +M G+ P+ TY LID++ +A + + + +M S
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P V T + A+ + Q+ + + AG +P+ T+ L+D KAG+ K
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 188 SAVMEYM----------------QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
V + ++ + +VTY ++D +A + L M S
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKC 288
+P+ + +L+ + AGK + V + + + L+D GRL
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD- 531
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
MK VL M + C P+ VTY M+ G A + L+E+
Sbjct: 532 -LAMK-VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 577
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + + AHEL AM+ GC+ N + AL+ + ++G D A + M P
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC-GYLP 512
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V+TY+ LI K D +LS M PN VTY +ID R +E L L
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE-SEKALKL 571
Query: 122 VKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ++ E C P+V T + G +G+ID + + G P+ T+ +L++
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA-----GDLKQME 223
AG +K ++ M++ ++ + Y I F ++ G L++ME
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 126/337 (37%), Gaps = 47/337 (13%)
Query: 36 AYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
A + G + A ++E D + D + +I ++A FD+ + L M
Sbjct: 84 ALCKEGRWADALDMIER----EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 139
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN VTY TL+ + + K + + M++E C P+ N + ++ N K
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 156 YEKFQSAGIQPSINTFNILLDS-------------------YGK---------------- 180
+ + G P +NI + S YG+
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259
Query: 181 ------AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
G F+K +++ M + + TY+ VI A +++ LF+ M+ +
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P T L+ ++ AG E+ + + + V + L+ AY + K +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+ M GC+P+ VTY +V G N +K F+
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAG--NISKAFE 414
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + + +LF M +GC N ++ L++ +GL DKA LL MK T P
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY--WP 651
Query: 62 D-VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ Y I+ K+F +L +M + G P Y LID + +A E+ +
Sbjct: 652 KYLQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRL-EIAME 708
Query: 121 LVKMLSE---DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L K + E + D ++A + Q++ + Y + G P ++ F L+
Sbjct: 709 LHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 6/312 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M +GC + ++ ++S + D+A +L M P +Y+ ++
Sbjct: 182 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV 235
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + F +V +++SDM +G++PN +TY T++DA+ +A L +M+ C
Sbjct: 236 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 295
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T +R + G++ + + G PS ++NIL+ G + S++
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 355
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+++ + TY+ +ID F +AGDL ++ M KP+ V ++V +
Sbjct: 356 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 415
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ S++ + + +TV FN L+ + + GV M++ GC P+ T
Sbjct: 416 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 475
Query: 311 YRTMVRAYSTNG 322
Y ++ G
Sbjct: 476 YNELIHGLFREG 487
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 1/311 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++++ MV EG +T S+ L+ G A S+L M+ C P+V TYS LI
Sbjct: 317 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLI 375
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ +DMS G +PN V Y ++D + + MF + + + KML E+C
Sbjct: 376 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 435
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N +R+ + ++ + + + G P+ T+N L+ + G+ +
Sbjct: 436 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 495
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ MQ + ++VTYN V+ + ++ M + I+P+ T +++ AY
Sbjct: 496 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 555
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ +L ++ + + + + L+ + L M G P+ VT
Sbjct: 556 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 615
Query: 311 YRTMVRAYSTN 321
+ +VR N
Sbjct: 616 WNVLVRGVFRN 626
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 141/332 (42%), Gaps = 9/332 (2%)
Query: 4 KCKQPEKAHELF-QAMVDEGCDANTQS--FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+ P++A + F +A+ D GC T+ + L+ A R + + ++M+
Sbjct: 102 RAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKD-GVH 160
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY++L+++ + + +L +M+ +G P+ VTY T++ + E
Sbjct: 161 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 220
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M P + N + A ++ + G+QP++ T+ ++D++ K
Sbjct: 221 LAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 275
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG A++ M + +VT+ ++ G + ++R M +E PS V+
Sbjct: 276 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 335
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+R G + S+L ++ + ++ L+D + + + M
Sbjct: 336 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 395
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ GCKP+ V Y MV + M N AK D
Sbjct: 396 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 7/177 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L C++ +A +F M GC N +++ L+ R G A ++ M+ + +
Sbjct: 448 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQ-SHGIEL 506
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
+ TY+ ++ + + + M QGI+PN T++ +I AY G +M A M
Sbjct: 507 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM- 565
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L M +C ++ + N ++ K GI P+ T+N+L+
Sbjct: 566 --LGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 620
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 21/343 (6%)
Query: 8 PEKAHELFQAMVDEGC---------------DANTQSFTA-----LLSAYGRSGLFDKAF 47
PE + A+VD C A+ Q+ +A L+ A G A
Sbjct: 124 PEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADAL 183
Query: 48 SLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA 107
+L+ M C PDV TY+IL+++ K + + L+ M +G PN VTYN +IDA
Sbjct: 184 VVLDGML-CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 108 YGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS 167
R + L + S C+P+ N L+ F + + ++ ++ P+
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 168 INTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
T N+++++ + G +K++ +E M K+ + +VTYN VI G++ L
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362
Query: 228 LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLK 287
M+S KP VT ++++ A + E ++ + +D + D FN ++ + +
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG 422
Query: 288 CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ V + M ++GC P+ TY T++ + G A E
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 137/318 (43%), Gaps = 2/318 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A EL M EGC+ N ++ ++ A R G D+A LL + + C+P+ Y+ +
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSR-GCKPNTVNYNTV 274
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+K + +L +M + PN T N +I+ R + ++ L L KM C
Sbjct: 275 LKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGC 334
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+V T N + G +D+ + QS G +P I T+N +L A +E
Sbjct: 335 TANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEE 394
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+M M + T+N +I + + G + Q +F+ M + P+ T +++
Sbjct: 395 LMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLT 454
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
AGK E+ +L + N D + L ++ + E+ V+ +Q G P V
Sbjct: 455 KAGKMEQALELLNEMANKGFNTDK-MYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTV 513
Query: 310 TYRTMVRAYSTNGMKNHA 327
Y T++ NG ++A
Sbjct: 514 LYNTVLLGLCRNGKTDYA 531
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 37/320 (11%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E+ MV E C N + +++ R GL K LE M C +V TY+ +I
Sbjct: 287 ADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH-GCTANVVTYNAVI 345
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ D LLS+M + G +P+ VTYNT++ A + + E ++KM D
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD T N + + G I + +++ G P+ T++ ++ KAG E+ +
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M ++ T Y ++ ++ + ++++ + ++ I P V +++
Sbjct: 466 LNEMANKGFN-TDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 524
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
GK +D +D VL M GC PD+ T
Sbjct: 525 NGK-------------TDYAID----------------------VLADMVSCGCMPDEST 549
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y ++ G A+E
Sbjct: 550 YIILIEGLFYEGYSKEAREL 569
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 124/324 (38%), Gaps = 39/324 (12%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P A + +A G +A ++ AL+ Y R+GL + A ++ M
Sbjct: 111 RPADAARVVEAC---GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHN 167
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++ C + D + +L M +G P+ VTYN L+ A + + + + + M +
Sbjct: 168 PLIHALCERGRVADAL-VVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRA 226
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E CEP+ T N + A G +D + S G +P+ +N +L + +
Sbjct: 227 EGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVD 286
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ M + + T N++I+ R G L+++ M + VT +++
Sbjct: 287 ADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVIS 346
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G + S L + N MQ GCKP
Sbjct: 347 GMCEQGN---VDSALELLSN--------------------------------MQSFGCKP 371
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
D VTY T+++ + A+E
Sbjct: 372 DIVTYNTVLKGLCSADRWEDAEEL 395
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT---Y 66
+A E+F+ M ++GC+ N+ +++ ++ ++G ++A LL M N NT Y
Sbjct: 426 QAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK-----GFNTDKMY 480
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+L +S K ++V ++ + GI P TV YNT++ R L M+S
Sbjct: 481 RVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVS 540
Query: 127 EDCEPDVWT 135
C PD T
Sbjct: 541 CGCMPDEST 549
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 6/312 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ M +GC + ++ ++S + D+A +L M P +Y+ ++
Sbjct: 155 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV 208
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + F +V +++SDM +G++PN +TY T++DA+ +A L +M+ C
Sbjct: 209 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 268
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+V T +R + G++ + + G PS ++NIL+ G + S++
Sbjct: 269 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 328
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ M+++ + TY+ +ID F +AGDL ++ M KP+ V ++V +
Sbjct: 329 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 388
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ S++ + + +TV FN L+ + + GV M++ GC P+ T
Sbjct: 389 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 448
Query: 311 YRTMVRAYSTNG 322
Y ++ G
Sbjct: 449 YNELIHGLFREG 460
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 1/311 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++++ MV EG +T S+ L+ G A S+L M+ C P+V TYS LI
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLI 348
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
KA ++ +DMS G +PN V Y ++D + + MF + + + KML E+C
Sbjct: 349 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 408
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P+ T N +R+ + ++ + + + G P+ T+N L+ + G+ +
Sbjct: 409 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 468
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ MQ + ++VTYN V+ + ++ M + I+P+ T +++ AY
Sbjct: 469 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 528
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G+ +L ++ + + + + L+ + L M G P+ VT
Sbjct: 529 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 588
Query: 311 YRTMVRAYSTN 321
+ +VR N
Sbjct: 589 WNVLVRGVFRN 599
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 123/328 (37%), Gaps = 15/328 (4%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ----------PDVN 64
Q M G + A + A+ R+G D+A + C P
Sbjct: 78 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPHRAAALQPPHRR 137
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
+ + + + +L +M+ +G P+ VTY T++ + E L M
Sbjct: 138 AAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 197
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
P + N + A ++ + G+QP++ T+ ++D++ KAG
Sbjct: 198 -----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGEL 252
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
A++ M + +VT+ ++ G + ++R M +E PS V+ L
Sbjct: 253 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 312
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+R G + S+L ++ + ++ L+D + + + M + GC
Sbjct: 313 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 372
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
KP+ V Y MV + M N AK D
Sbjct: 373 KPNVVVYTNMVDVFCKKLMFNQAKSLID 400
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 7/177 (3%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L C++ +A +F M GC N +++ L+ R G A ++ M++ +
Sbjct: 421 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSH-GIEL 479
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEME 118
+ TY+ ++ + + + M QGI+PN T++ +I AY G +M A M
Sbjct: 480 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM- 538
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L M +C ++ + N ++ K GI P+ T+N+L+
Sbjct: 539 --LGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 593
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 152/335 (45%), Gaps = 2/335 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ ++ + A F+ M + C + +F L+ ++G+ +KAF + M P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D ++ ++++ LKA + + + M G P+ + YNT+ID +A E L
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
ML++ C P T + + +G ++ E+ + ++G +P+ + L+ + K+
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ ++ + M + Y ++T+ ++ID ++G+ +Q F M KP+ VT
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
++++ G+ +++ + D+V + CL+D + +L E +L+ + +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
P+ Y ++V G + K DL E+
Sbjct: 464 CSSSPNLQLYSSLVNGLCDGG--SVEKTLDDLFEQ 496
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
Q DV TY+ L+ + + + A+ +M GI PNT ++N LI ++ R + +
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175
Query: 120 TLVKMLSEDCEPDVWT----MNC--------------------------------TLRAF 143
M + C+PD+ T ++C +R
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ ++ + + + + G P +N ++D KAGH ++ V++ M T
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTY I++++ +AG L++ E LFR+M + +P+ V SL+ + +G+ ++ S+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + D + ++D + F + E M + GCKP+ VTY T+++ S G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 37/279 (13%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TYN L++ K +++ +ML P+ ++ N +R+F + + D
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGH-------FEKMSA---------------- 189
C+E + +P ++TF IL+D KAG F +M A
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 190 -------------VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
V M+K + + YN +ID +AG ++ + M ++ P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT LV + AG E+ + R + S ++V + L+ + + E +
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ M + G +PD +T+ M+ +G + AK F++++
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 142/375 (37%), Gaps = 54/375 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A + + M+ GC ++ ++ LL + + G D+A LL+ + P
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS-SP 468
Query: 62 DVNTYS-------------------------------------ILIKSCLKAFAFDKVQA 84
++ YS I++ C K D+
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC-KTGRLDEACR 527
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE-----PDVWTMNCT 139
+ M ++G +P+ TYN LI+ R++ E + L D E PD T
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSR---ENRVERAFALLHDLEKVGYLPDAVTYTPL 584
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
G++D K E+ S G + + L G ++ ++ + M +
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+ Y +I+ + L+ F M + KP+ T +LV+A HAG ++ +
Sbjct: 645 APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE--A 702
Query: 260 VLRF---IDNSDIMLDTVFFNCLVDAYGR-LKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
RF + +++ + ++ L+ + + LK A +K + E M RG P VT ++
Sbjct: 703 FHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALK-LFEDMISRGNVPTAVTSASLF 761
Query: 316 RAYSTNGMKNHAKEF 330
+G A+E
Sbjct: 762 DGLVRSGKTEKAQEL 776
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AG Q + T+N L++ ++ + A+ E M K + ++NI+I +F R
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVFFNC 278
F +M+ +R KP T LV AG EK V + + D
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+V + K E + V M++ G PD + Y TM+ + G HA+E +++ M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG---HAQEALKVLDNM 286
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ E A + F M+ +G ++TAL+ A +G D+AF E M +
Sbjct: 658 LIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG 717
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y LI KA D L DM ++G P VT +L D R+ + + L
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
+M + P T L S +
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKSDE 804
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 147/319 (46%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ ++ + A F+ M + C + +F L+ ++G+ +KAF + M PD
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
++ ++++ LKA + + + M G P+ + YNT+ID +A E L
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML++ C P T + + +G ++ E+ + ++G +P+ + L+ + K+G
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ + M + Y ++T+ ++ID ++G+ +Q F M KP+ VT +
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
+++ G+ +++ + D+V + CL+D + +L E +L+ + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 304 CKPDKVTYRTMVRAYSTNG 322
P+ Y ++V+ G
Sbjct: 466 SSPNLQLYSSLVKGLCDGG 484
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
Q DV TY+ L+ + + + A+ +M GI PNT ++N LI ++ R + +
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175
Query: 120 TLVKMLSEDCEPDVWT----MNC--------------------------------TLRAF 143
M + C+PD+ T ++C +R
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ ++ + + + + G P +N ++D KAGH ++ V++ M T
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
VTY I++++ +AG L++ E LFR+M + +P+ V SL+ + +G+ ++ S+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ + D + ++D + F + E M + GCKP+ VTY T+++ S G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 2/313 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ ++A E+F M G + ++ ++ ++G +A +L++M C P
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA-CVPTE 295
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY IL+ S KA ++ + L M+ G RPN+V Y +LI + ++ E +
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ PDV T + SG + K +E+ G +P++ T+ ++ K G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+M+ M + VTY ++D F + G L + L + P+ S
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 244 LVRAYGHAGKPEK-LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
LV+ G E L + + LD ++ + E + + M
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 303 GCKPDKVTYRTMV 315
GCKPD TY ++
Sbjct: 536 GCKPDATTYNILI 548
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 37/279 (13%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TYN L++ K +++ +ML P+ ++ N +R+F + + D
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGH-------FEKMSA---------------- 189
C+E + +P ++TF IL+D KAG F +M A
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 190 -------------VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
V M+K + + YN +ID +AG ++ + M ++ P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ VT LV + AG E+ + R + S ++V + L+ + + E +
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLV 334
+ M + G +PD +T+ M+ +G + AK F++++
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 141/374 (37%), Gaps = 52/374 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A + + M+ GC ++ ++ LL + + G D+A LL+ + P
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS-SP 468
Query: 62 DVNTYSILIKSCL------------------------------------KAFAFDKVQAL 85
++ YS L+K K D+ +
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE-----PDVWTMNCTL 140
M ++G +P+ TYN LI+ R++ E + L D E PD T
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSR---ENRVERAFALLHDLEMVGYLPDAVTYTPLC 585
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
G++D K E+ S G + + L G ++ ++ + M + +
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSV 260
Y +I+ + L+ F M + KP+ T +LV+A HAG ++ +
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE--AF 703
Query: 261 LRF---IDNSDIMLDTVFFNCLVDAYGR-LKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
RF + +++ + ++ L+ + + LK A +K + E M RG P VT ++
Sbjct: 704 HRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALK-LFEDMISRGNVPTAVTSASLFD 762
Query: 317 AYSTNGMKNHAKEF 330
+G A+E
Sbjct: 763 GLVRSGKTEKAQEL 776
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AG Q + T+N L++ ++ + A+ E M K + ++NI+I +F R
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR-FIDNSDIMLDTVFFNC 278
F +M+ +R KP T LV AG EK V + + D
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+V + K E + V M++ G PD + Y TM+ + G HA+E +++ M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG---HAQEALKVLDNM 286
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K+ E A + F M+ +G ++TAL+ A +G D+AF E M +
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V Y LI KA D L DM ++G P VT +L D R+ + + L
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNS 146
+M + P T L S
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKS 802
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 4/317 (1%)
Query: 1 MLGKCKQPEKAHELF-QAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
+L + K+ A+ F A G + ++T +L GR+ FD +LL+ M C
Sbjct: 40 ILKQQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIRE-GC 98
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF-AEME 118
+P+V TY+ LI +A D L + M G P+ VTY TLID +A A M+
Sbjct: 99 EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMD 158
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M PD +T + + G +G+++ K + + G PS+ T+NI++D +
Sbjct: 159 L-YRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLH 217
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
KAG F+ + +Q+ Y+ VTY I+++ G G ++ E +F M
Sbjct: 218 AKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADN 277
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+V +G G EK + +S + + N L+ AY R + GVL
Sbjct: 278 PIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGG 337
Query: 299 MQQRGCKPDKVTYRTMV 315
M + G P TY +++
Sbjct: 338 MAKWGLYPTLQTYTSLL 354
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 17/323 (5%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G Q E +A+ + N +L +G+ A++ + + D
Sbjct: 10 GILNQHGWGDETVRALAGLNANLNAYQVNEILKQQKEAGV---AYNFFIWARKQAGFKHD 66
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KMFA 115
V+TY+ ++ +A +FD + LL +M +G PN VTYN LI YGRA K+F
Sbjct: 67 VHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFN 126
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
M++ CEPD T + +G D Y + Q AG +P T++I++
Sbjct: 127 VMQMV-------GCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIII 179
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
GKAG + M Y+ ++VTYNI+ID +AG L+ ++
Sbjct: 180 HCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYA 239
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P VT ++ G+ G E V ++ + + D F +VD +G+ +
Sbjct: 240 PDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQW 299
Query: 296 LEVMQQRGCKPDKVTYRTMVRAY 318
M G +P+ +++ AY
Sbjct: 300 FNRMLDSGLQPNVPACNSLLSAY 322
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%)
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
G + + TY T++ GRAK F + L +M+ E CEP+V T N + +G + +D+
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + Q G +P T+ L+D KAG + + MQ + TY+I+I
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHC 181
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
G+AG L LF M PS VT ++ + AGK + + + D
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
V + +++ G + + V E M++ G D + MV + G A ++
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQW 299
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 141/352 (40%), Gaps = 60/352 (17%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+ + + +LF M GC+ + ++ L+ ++G D A L M++ +PD
Sbjct: 113 GRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHA-GFRPD 171
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TYSI+I KA + L +M+ +G P+ VTYN +ID + +A F +M L L
Sbjct: 172 TFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKF-DMALKLY 230
Query: 123 KMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG------------------ 163
L E PD T + GN G I+ E+ +E+ + AG
Sbjct: 231 SDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKT 290
Query: 164 -----------------IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
+QP++ N LL +Y ++ ++ V+ M K+ T+ TY
Sbjct: 291 GNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTY 350
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL---------VRAYGHAGKPEKL 257
++ + + + LF LM P+ +CSL +R + A + E+L
Sbjct: 351 TSLLSSCAACRAAWEYDALFGLMGGTG-HPAHPFVCSLLASGEMVVGIRCFFDAMQFEEL 409
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
S F D+ L+D R V EV ++ P+ V
Sbjct: 410 ESRRGFADS------------LIDFLHRAGKAVAAGSVWEVAAEKNLYPNAV 449
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AG + ++T+ +L G+A F+ ++ +++ M + +VTYN +I +GRA DL
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF +M+ +P VT C+L+ AG + + R + ++ DT ++ +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSII 178
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ G+ + M RG P VTY ++ ++ G + A K + DL E
Sbjct: 179 IHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
M GK EKA + F M+D G N + +LLSAY RS +D A +L M
Sbjct: 286 MWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKW-GLY 344
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG 93
P + TY+ L+ SC A + AL M G
Sbjct: 345 PTLQTYTSLLSSCAACRAAWEYDALFGLMGGTG 377
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 146/315 (46%), Gaps = 1/315 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q + +L+ + G + +F+ ++ Y ++G A S+LE M+ D PD+ +
Sbjct: 339 QFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLF 398
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+++ + DK+ L + G+ + YN LI+ RA E+ +ML
Sbjct: 399 RDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLFNEMLQ 458
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+P+ T N L + + + + + + G+ I ++N ++ +YG+ F+
Sbjct: 459 RGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDVI-SYNTIIAAYGRKRDFKN 517
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
M++ + MQ +S ++ YN V+DA+G+ G ++ + + M++ T ++
Sbjct: 518 MASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMN 577
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
YG G +++ VL + + D +N L+ AYG + G+++ M+Q G +P
Sbjct: 578 IYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRQNGVEP 637
Query: 307 DKVTYRTMVRAYSTN 321
DK+TY ++ N
Sbjct: 638 DKITYTNLITTLQKN 652
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 153/369 (41%), Gaps = 48/369 (13%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK------NT 56
GK A LF + + G + + ++ +++ +GR G + +A + +K N+
Sbjct: 126 GKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLGFKPNS 185
Query: 57 PDCQPDVN-----------------------TYSILIKSCLKAFA----FDKVQALLSDM 89
P+ +N YS ++ + LKA+ DK+ LL
Sbjct: 186 PNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKAYEKVGRIDKIPFLLKGS 245
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD-VWTMN------CTLRA 142
Q + N + + L+ AY + + E +K+L + D V+ N C+ +
Sbjct: 246 FYQHVTVNQNSCSILVIAYVKNLLVDEA----IKLLGDKKWNDPVFEDNLYHLLICSCKE 301
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G+ +D+ K Y + +P+++ ++D Y G F + + ++
Sbjct: 302 LGH---LDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQFNEGEKLYMKLKSSGIGLD 358
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
++ ++IVI + +AG LK + M E+ + P ++R Y G +KL +
Sbjct: 359 VIAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLFRDMLRVYQQCGMMDKLNDLY 418
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
I S ++ D +NCL++ R E+ + M QRG P+ +T+ M+ Y+
Sbjct: 419 FKILKSGVVWDQELYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKA 478
Query: 322 GMKNHAKEF 330
+ N A+E
Sbjct: 479 KLFNKAREL 487
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 38/351 (10%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA E+ M D+ N +++ LL+AY + G +KA LL M+ P + Y+I
Sbjct: 62 DKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAK-FSPTIVAYNI 120
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA Q L S + G+ P+ TY ++I+ +GR + E E ++
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 180
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P+ + + G + + + G Q S + LL +Y K G +K+
Sbjct: 181 FKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYS-SILGTLLKAYEKVGRIDKIP 239
Query: 189 AVMEYMQKYHY-------SWTIVTY--NIVID-AFGRAGDLKQMEYLFR----------- 227
+++ H S ++ Y N+++D A GD K + +F
Sbjct: 240 FLLKGSFYQHVTVNQNSCSILVIAYVKNLLVDEAIKLLGDKKWNDPVFEDNLYHLLICSC 299
Query: 228 --------------LMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
LM +P+ C+++ Y G+ + + + +S I LD
Sbjct: 300 KELGHLDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQFNEGEKLYMKLKSSGIGLDV 359
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQ-QRGCKPDKVTYRTMVRAYSTNGM 323
+ F+ ++ Y + + VLE M+ ++ PD +R M+R Y GM
Sbjct: 360 IAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLFRDMLRVYQQCGM 410
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
QP+V T+ +++ K + ++ + + M + GI + Y+ +I Y R ++ + E
Sbjct: 8 QPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIICQS-AYSAMITIYTRLSLYDKAEE 66
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ M + ++ L A+ G+++ E+ Q A P+I +NIL+ YG
Sbjct: 67 VIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGYG 126
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
KA + + +Q TY +I+ +GR G+ K+ E+ ++ ++ KP+
Sbjct: 127 KASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLGFKPNSP 186
Query: 240 TLCSLVRAYGHAGKPE 255
L +L+ G E
Sbjct: 187 NLYTLINLQAEHGDEE 202
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV---TYNIVIDAFGRAGDL 219
G+QP++ TF +++ Y K + E+ M+ S+ I+ Y+ +I + R
Sbjct: 6 GVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMR----SFGIICQSAYSAMITIYTRLSLY 61
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
+ E + LMR +++ + L+ AY GK EK +L + + V +N L
Sbjct: 62 DKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNIL 121
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ YG+ + + +Q G +PD TYR+M+ + G A+ +
Sbjct: 122 ITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWY 172
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
ML +P+V T + + ++ E + + +S GI + ++ ++ Y +
Sbjct: 2 MLELGVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIICQ-SAYSAMITIYTRLSL 60
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++K V+ M+ + + ++++A+ + G L++ E L M+ + P+ V
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNI 120
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L+ YG A + I N+ + D + +++ +GR+ + E + + +++ G
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 180
Query: 304 CKPDKVTYRTMVRAYSTNG 322
KP+ T++ + +G
Sbjct: 181 FKPNSPNLYTLINLQAEHG 199
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK Q E + Q M + C A+ ++ +++ YG G D+ +L ++ PD
Sbjct: 545 GKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLTELREC-GLGPD 603
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLI 105
+ +Y+ LIK+ A + L+ +M G+ P+ +TY LI
Sbjct: 604 LCSYNTLIKAYGIAGMVEDAVGLVKEMRQNGVEPDKITYTNLI 646
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 147/309 (47%), Gaps = 4/309 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS- 72
L+ M+ G N ++ ++++ +SG ++A L+ M+ C P+V YS LI
Sbjct: 154 LYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKV-GCVPNVVNYSTLIDGY 212
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
CL+ D+ +++ M ++G PN TY +L++ Y + + E L + L + PD
Sbjct: 213 CLRG-QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ T + +G+ ++ + + G P+I T+ +LLD K G+ E+ A+ +
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
MQ+ +V Y I+ID+ + G +K + LF + E +KP+ T +LV A G
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + R ++ D +N ++ + + K + + ++E M RG D T R
Sbjct: 392 LIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-R 450
Query: 313 TMVRAYSTN 321
++ + TN
Sbjct: 451 ALLNDFPTN 459
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 4/318 (1%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G + + S + L++ + D S+L + +P + T++ L+ D+
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKL-GLEPSIVTFTTLLNGLCMEGKMDQ 150
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
V L DM +G++PN TYN +I++ ++ E L +M C P+V + +
Sbjct: 151 VMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+ GQ+D ++ S G P++ T+ L++ Y K E+ +++ +
Sbjct: 211 GYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVP 270
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
IVT+ +I RAG + LFR + + P+ +T L+ G E+ ++
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALF 330
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + S + + V + L+D+ + + K + + G KP+ TY +V A
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390
Query: 322 GMKNHAKEFQDLVEKMDE 339
G+ E L KM+E
Sbjct: 391 GL---IIEAHKLFRKMEE 405
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+ +P A +LF+ + G N ++ LL + G ++AF+L + M+ + +
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS-TVK 339
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P++ Y+ILI S K + L S + +G++PN TY L+ A + + E
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKL 399
Query: 121 LVKMLSEDCEPDVWTMNCTLRAF 143
KM + C PD N ++ F
Sbjct: 400 FRKMEEDGCTPDKCAYNVIIQGF 422
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G +T+ ++ + GI+ I++ +IL++ + + +V+ + K +IVT+
Sbjct: 76 GHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTF 135
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+++ G + Q+ L+ M ++P+ T ++ + +GK + L+ ++
Sbjct: 136 TTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEK 195
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + V ++ L+D Y E + V ++M +GC P+ TY +++ Y
Sbjct: 196 VGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYC------K 249
Query: 327 AKEFQDLVEKMDETCLAMKRPDF 349
+ ++ V+ +DET PD
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDI 272
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC + + ELF ++DEG N ++TAL+ A + GL +A L M+ C P
Sbjct: 352 LCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED-GCTP 410
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLID 106
D Y+++I+ L+ + L+ +M +G + T L D
Sbjct: 411 DKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 153/344 (44%), Gaps = 42/344 (12%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK A ++ M G N S TAL+ AYGR ++ A ++ M+++ +P
Sbjct: 151 GKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSS-GPKPS 209
Query: 63 VNTYSILIKSCL--------------------------------------KAFAFDKVQA 84
TY I++K+ + KA ++K +
Sbjct: 210 AVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQ 269
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
+ + M+ +G+ +TVTYN+L+ + E+ +M +PDV + + A+G
Sbjct: 270 IFALMTQRGVPKSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVISYALLINAYG 326
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + D +E+ AG++P+ +NILLD++ +G E+ V + M++ Y+ +
Sbjct: 327 KARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLC 386
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+Y ++ A+ A D+ E F ++ + ++P+ VT +L++ Y +K+ +
Sbjct: 387 SYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEM 446
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ + F ++DAYG+ K F + M+Q G PD+
Sbjct: 447 QLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVPPDQ 490
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 40/359 (11%)
Query: 2 LGKCKQPEKAHELFQAM----VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
L + KQ +K H + Q + D N L++AYG+ G F A +L +M N
Sbjct: 111 LVRFKQLKKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYM-NKM 169
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P+V +++ L+++ + ++ +A+ M + G +P+ VTY ++ + F E
Sbjct: 170 GYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEA 229
Query: 118 ELTLVKMLSED---CEPDVWTMNCTL---RAFGN---SGQI------------------- 149
E +L E+ +PD + + R GN + QI
Sbjct: 230 EEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSL 289
Query: 150 -------DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ K Y++ Q +G+QP + ++ +L+++YGKA ++ AV E M T
Sbjct: 290 MSFETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPT 349
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
YNI++DAF +G ++Q +F+ MR +R P + +++ AY +A +
Sbjct: 350 HKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFN 409
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + V + L+ Y + +M E MQ RG K ++ + T++ AY N
Sbjct: 410 RLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGKN 468
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
LI AYG+ F+ E L M P+V + + A+G + + E + + QS+G
Sbjct: 146 LITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSG 205
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYM---QKYHYSWTIVTYNIVIDAFGRAGDLK 220
+PS T+ I+L ++ + F++ V E + +K ++++I +AG+ +
Sbjct: 206 PKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYE 265
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 280
+ +F LM + S VT SL+ +++ + + S + D + + L+
Sbjct: 266 KARQIFALMTQRGVPKSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVISYALLI 322
Query: 281 DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
+AYG+ + E V E M G +P Y ++ A++ +GM A+
Sbjct: 323 NAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAR 370
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+L+ +YGK G+F V+ YM K Y +V++ +++A+GR E +FR M+S
Sbjct: 145 MLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSS 204
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI---DNSDIMLDTVFFNCLVDAYGRLKCF 289
KPS VT +++ + K ++ V + + S + D F+ ++ + + +
Sbjct: 205 GPKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNY 264
Query: 290 AEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
+ + + +M QRG VTY +++ ++ TN KE + ++M + L +PD
Sbjct: 265 EKARQIFALMTQRGVPKSTVTYNSLM-SFETN-----YKEVSKIYDQMQRSGL---QPD 314
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 7/316 (2%)
Query: 5 CKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVN 64
C E++ EL + ++ N +F ++ + G +A +LL MK C PDV
Sbjct: 172 CLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAI-GCSPDVV 230
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT---L 121
TY+ LI K ++V+ L+ +M G RP+ VTYN L++ + + F ME
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCK---FGRMERAYSYF 287
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M E +V T + + AF +G + K + + + G++P+ T+ L+D KA
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + + M + +VTY +++D + G + + E +FRLM I+ + +
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+L+ + E+ S+L + + + LD + L+ L+ E K +L M +
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
Query: 302 RGCKPDKVTYRTMVRA 317
G KP+ V Y ++ A
Sbjct: 468 CGLKPNNVIYTNIMDA 483
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 7/307 (2%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
LLS GL D A L ++ P+ T + + L A ++ L + Q
Sbjct: 134 LLSLLADRGLLDDAVLALARVREL-RVPPNTRTCNHI----LLCLARERSSELAWRLFEQ 188
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
PN T+N +ID + AE L +M + C PDV T N + +G G+++ +
Sbjct: 189 LPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
EK + + G +P + T+N L++ + K G E+ + M++ +VT++ +DA
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDA 308
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
F + G +++ LF MR + +KP+ VT LV AG+ + + + + L+
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368
Query: 273 TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
V + LVD + AE + V +M++ G + +++ Y T++ + KN +
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV--YKNSERALSL 426
Query: 333 LVEKMDE 339
L E D+
Sbjct: 427 LSEMKDK 433
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 38/337 (11%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + +A ++F+ M G AN +T L+ + ++A SLL MK+ +
Sbjct: 378 GLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDK-GME 436
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV+ Y LI D+ ++LL+ M G++PN V Y ++DA +A+ +E
Sbjct: 437 LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIAL 496
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM+ P++ T + +G ID + K G++P++ + L+D K
Sbjct: 497 LQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK 556
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G +K +++ M S V ++D + G+L+
Sbjct: 557 NGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD------------------- 597
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
A+ K + NS + LD + C V + L E + VL M
Sbjct: 598 ------AFALKAK----------MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
+ G PD V Y ++ G A Q+ +E +
Sbjct: 642 ENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 136/330 (41%), Gaps = 1/330 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GKC + E+ +L M GC + ++ AL++ + + G ++A+S MK +
Sbjct: 240 GKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKRE-GVMAN 298
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V T+S + + K + L + M +G++PN VTY L+D +A + +
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + +V T + G++ E + + AGI+ + + L+ +
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ E+ +++ M+ + Y +I L + + L M +KP+ V
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYT 478
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+++ A A K + ++L+ + +S + V + LVD + E M
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
G +P+ Y +V NG + A D
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLD 568
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 11/335 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-----FDKAFSLLEHMKNTPDCQPDVN 64
KA L G S+ A+L A R +D A + M P+V
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRN-GVSPNVY 208
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
TY+++I+ + +K + M +GI PN VTYNTLIDA + K E L M
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
++ + N + G++ + + E+ + G+ P T+N L++ + K G+
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNL 328
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ ++ M S +VTY +I+ +AG+L + +F MR ++P+ T +L
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTL 388
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
+ + G + VL + S V +N LV Y L E G+L M +RG
Sbjct: 389 IDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL 448
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQ---DLVEK 336
PD V+Y T++ + + K FQ ++VEK
Sbjct: 449 PPDVVSYSTVIAGFCRE--RELGKAFQMKEEMVEK 481
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 148/327 (45%), Gaps = 7/327 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK + M EG N ++ L+ A + +A +LL M ++ +Y+
Sbjct: 224 EKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA-VGGVAANLISYNS 282
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +V L+ +M +G+ P+ VTYNTL++ + + + + L +M+ +
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+V T + +G + + +++ + G++P+ T+ L+D + + G +
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAY 402
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V+ M +S ++VTYN ++ + G +++ + R M + P V+ +++ +
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462
Query: 249 GHAGKPEKLGSVLRFIDN---SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+ +LG + + ++ DTV ++ L+ + E + M +RG
Sbjct: 463 C---RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQD 332
PD+VTY +++ AY +G + A D
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHD 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 14/329 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ ++A L +AM G AN S+ ++++ G + L+E M+ PD
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK-GLVPDE 312
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ L+ K + LLS+M +G+ PN VTY TLI+ +A + +
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M P+ T + F G ++ K + +G PS+ T+N L+ Y G
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ ++ M + +V+Y+ VI F R +L + + M + + P VT S
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF-AEMKGVLEV---M 299
L++ K + + R + + D V + L++AY C E+ L + M
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY----CVDGELSKALRLHDEM 548
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
QRG PD VTY ++ NG+ A+
Sbjct: 549 VQRGFLPDNVTYSVLI-----NGLNKKAR 572
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 133/326 (40%), Gaps = 8/326 (2%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK + E EL + M +G + ++ L++ + + G + LL M P+
Sbjct: 289 GKGRMSEVG-ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK-GLSPN 346
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ LI KA + + M +G+RPN TY TLID + + + E L
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ P V T N + + G++ G+ P + +++ ++ + +
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
K + E M + VTY+ +I L + LFR M + P VT
Sbjct: 467 ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYT 526
Query: 243 SLVRAYGHAGKPEKLGSVLRFID---NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
SL+ AY G +L LR D + D V ++ L++ + K +L +
Sbjct: 527 SLINAYCVDG---ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKN 325
PD VTY T++ S N K+
Sbjct: 584 FYEESVPDDVTYNTLIENCSNNEFKS 609
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 32/281 (11%)
Query: 52 HMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
H+ ++P V + +++KS + K LL + G P ++YN ++DA R
Sbjct: 123 HLCSSPFSSSAV--FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLR- 179
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
R+ N D E+ + G+ P++ T+
Sbjct: 180 -----------------------------RSSSNHRDYDDAERVFRDMVRNGVSPNVYTY 210
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N+++ G EK M M+K S +VTYN +IDA + +K+ L R M
Sbjct: 211 NVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAV 270
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ + ++ S++ G+ ++G ++ + ++ D V +N LV+ + + +
Sbjct: 271 GGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQ 330
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+L M +G P+ VTY T++ G + A E D
Sbjct: 331 GLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 24/318 (7%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + MV+ G + S++ +++ + R KAF + E M PD TYS
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEK-GVLPDTVTYSS 492
Query: 69 LIKS-CLK---AFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
LI+ CL+ AFD L +M +G+ P+ VTY +LI+AY ++ +M
Sbjct: 493 LIQGLCLQQKLVEAFD----LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS------- 177
+ PD T + + + ++ K P T+N L+++
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFK 608
Query: 178 --------YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLM 229
+ G + V + M + ++ YN++I R G++ + L+ +
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Query: 230 RSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF 289
V + +LV+A G ++L +L+ I S + D LV+ +
Sbjct: 669 EHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNM 728
Query: 290 AEMKGVLEVMQQRGCKPD 307
+ VL M + G PD
Sbjct: 729 DAVLNVLTEMAKDGLLPD 746
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
DT C F S+ + F++++ S + G K ++ ++ ++ T+++YN V
Sbjct: 120 DTFHLCSSPFSSSAV------FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAV 173
Query: 210 IDAFGRAG-----DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
+DA R D E +FR M + P+ T ++R G EK +R +
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM- 323
+ I + V +N L+DA + K E +L M G + ++Y +++ NG+
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI-----NGLC 288
Query: 324 -KNHAKEFQDLVEKM 337
K E +LVE+M
Sbjct: 289 GKGRMSEVGELVEEM 303
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 153/319 (47%), Gaps = 2/319 (0%)
Query: 17 AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKA 76
AM +G +NT + L++AY ++ ++A + MK TY+IL+ + +
Sbjct: 399 AMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEK-GLSATAMTYNILMGAYCRR 457
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWT 135
+ V++LL +M G+RPN +YN LI YG+ K +E E ++M ++ P T
Sbjct: 458 LQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSST 517
Query: 136 MNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQ 195
L A+ +G + Y + G++PS+ T+ L+D + +AG EK+ M
Sbjct: 518 YTSLLCAYAVNGLHEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDTEKLMETWRSMI 577
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
T V +++V+D + G Q + R ++P+ +T L+ A+ G+
Sbjct: 578 NEKVPGTRVIFHMVLDGLAKHGLYVQATDVIYEFRRAGLQPTVMTYNILMNAFARGGQHY 637
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
KL +L+ + ++ D+V ++ ++ AY R++ F+ ++M + G PD +Y+ ++
Sbjct: 638 KLPQLLKEMAAMELKPDSVTYSTMIYAYARVRDFSRAFYYHKLMVRSGQLPDVSSYKKLL 697
Query: 316 RAYSTNGMKNHAKEFQDLV 334
+ + K+ +V
Sbjct: 698 NTLDVKAARKNIKDKNAIV 716
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 40/371 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFD---KAFSLLEHMKNTPD 58
LG+ + ++ E+ +++ E + + A +S G +D K F L+E PD
Sbjct: 278 LGRAQMADEVLEIVESLPPERRFSEAVLYNAAMSGLAYRGRYDDTWKVFKLMEKKNIQPD 337
Query: 59 CQPDVNTYSILIKSCLKA----------------FAFD--------------KVQALL-- 86
+ ++ KS A ++ D K +AL+
Sbjct: 338 HMTSLIMLDVMNKSKTSAKDAWEFFQRMERKGVKWSLDICISLIKIFCDNGLKTEALIIQ 397
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
S M +GI NT YNTLI+AY +A E E V+M + T N + A+
Sbjct: 398 SAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRR 457
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF-EKMSAVMEYMQKYHYSWTIVT 205
Q + +E + Q G++P+ ++N L+ YG+ EK M+ T T
Sbjct: 458 LQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSST 517
Query: 206 YNIVIDAFGRAGDLKQMEYLFRL-MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y ++ A+ G L + YL + M+ E +KPS T +L+ + AG EKL R +
Sbjct: 518 YTSLLCAYAVNG-LHEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDTEKLMETWRSM 576
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
N + V F+ ++D + + + V+ ++ G +P +TY ++ A++ G
Sbjct: 577 INEKVPGTRVIFHMVLDGLAKHGLYVQATDVIYEFRRAGLQPTVMTYNILMNAFARGG-- 634
Query: 325 NHAKEFQDLVE 335
H K Q L E
Sbjct: 635 QHYKLPQLLKE 645
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K EKA + F M +G + ++T+LL AY +GL +KA+ MK +P + T
Sbjct: 494 KMSEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAVNGLHEKAYLTYVDMKRE-GLKPSLET 552
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ LI +A +K+ M + + V ++ ++D + ++ + + +
Sbjct: 553 YTALIDMFRRAGDTEKLMETWRSMINEKVPGTRVIFHMVLDGLAKHGLYVQATDVIYEFR 612
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+P V T N + AF GQ + + ++ + ++P T++ ++ +Y + F
Sbjct: 613 RAGLQPTVMTYNILMNAFARGGQHYKLPQLLKEMAAMELKPDSVTYSTMIYAYARVRDFS 672
Query: 186 K 186
+
Sbjct: 673 R 673
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 128/307 (41%), Gaps = 48/307 (15%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS--ILIKSCLKAFAF----DK 81
Q++ + A GR+ + D+ ++E + P +S +L + + A+ D
Sbjct: 269 QAWLLAVVALGRAQMADEVLEIVESL-------PPERRFSEAVLYNAAMSGLAYRGRYDD 321
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ M + I+P+ +T ++D ++K A+ D W
Sbjct: 322 TWKVFKLMEKKNIQPDHMTSLIMLDVMNKSKTSAK---------------DAWEF----- 361
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
+++ + G++ S++ L+ + G + + M+K +
Sbjct: 362 --------------FQRMERKGVKWSLDICISLIKIFCDNGLKTEALIIQSAMEKKGIAS 407
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
YN +I+A+ +A +++ E +F M+ + + + +T L+ AY +PE + S+L
Sbjct: 408 NTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLL 467
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAE-MKGVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ + + + +N L+ YG+ K +E + M+ G P TY +++ AY+
Sbjct: 468 LEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAV 527
Query: 321 NGMKNHA 327
NG+ A
Sbjct: 528 NGLHEKA 534
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 1/327 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A ++ + +GC ++T L+ + +A +LE M C PD+ TY+ L
Sbjct: 253 QAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMA-MEGCYPDIVTYNSL 311
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ K ++ ++ ++ + G++PN VTYNTLI + + E++ L M
Sbjct: 312 VNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSS 371
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P T N L SG +D Y + P I T+N LL K G ++
Sbjct: 372 PPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQ 431
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++ + S +VTYNIVID R G ++ + L+ M + I P +T SL +
Sbjct: 432 LLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFC 491
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
A + E+ +L+ + + + + C++ R K VL++M + C PD+
Sbjct: 492 RADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDER 551
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y +++A + GM A + + K
Sbjct: 552 IYSALIKAVADGGMLKEANDLHQTLIK 578
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 149/371 (40%), Gaps = 42/371 (11%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A L M + + S T L+ + R GL D+A L M + PD TY+++I
Sbjct: 149 AARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGV-PDTITYNMVI 207
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDA------YGRAKMFAEMEL----- 119
K L+ DMS G P+ +TYN++I + +A F +L
Sbjct: 208 GGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCP 267
Query: 120 ------------------------TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
L M E C PD+ T N + G+ +
Sbjct: 268 PYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALV 327
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
S G+QP+ T+N L+ S G+++++ +++ M + T VTYNI+++ +
Sbjct: 328 ILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCK 387
Query: 216 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVF 275
+G L + + M +E P +T +L+ G ++ +L + + V
Sbjct: 388 SGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVT 447
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+N ++D RL K + + M +G PD++T+ ++ + A + ++ E
Sbjct: 448 YNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFC------RADQLEEATE 501
Query: 336 KMDETCLAMKR 346
+ E + +R
Sbjct: 502 LLKEMSMKEQR 512
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A + MV E C + ++ LLS + G D+ LL + T C
Sbjct: 384 GLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGT-SCS 442
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY+I+I + + + + L +M +GI P+ +T+++L + RA E
Sbjct: 443 PGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATEL 502
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M ++ C + ++D + + P ++ L+ +
Sbjct: 503 LKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVAD 562
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
G ++ + + + + K W I+ I+++
Sbjct: 563 GGMLKEANDLHQTLIK----WKILKKEIMLN 589
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 89/244 (36%), Gaps = 36/244 (14%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++ ++ + M + ++ LL+ +SGL D+A S M T +C PD+ TY+
Sbjct: 357 DEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMV-TENCSPDIITYNT 415
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ K D+ LL+ + P VTYN +ID R
Sbjct: 416 LLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARL----------------- 458
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
G +++ ++ Y++ GI P T + L + +A E+ +
Sbjct: 459 ------------------GSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEAT 500
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+++ M Y VI R + + LM + P +L++A
Sbjct: 501 ELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAV 560
Query: 249 GHAG 252
G
Sbjct: 561 ADGG 564
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 5/325 (1%)
Query: 21 EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFD 80
+GC + ++ ++ + R G +A L E T + PDV TY++LI C K+ +
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM-TKESVPDVFTYNLLIALC-KSKQLE 317
Query: 81 KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTL 140
+ L + G+ + TY+ L+DA+G+A A+ M C PD N +
Sbjct: 318 EALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLI 377
Query: 141 RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYS 200
G G++D + E GI P T+NI++D G +EK + M++ +S
Sbjct: 378 SCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 437
Query: 201 WTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE-KLGS 259
+VTYN +++ + + LF M++ + P T +L+ AG+ E L
Sbjct: 438 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 497
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
R + ++ +N L+ + R + + + M + C PD +TY +V +S
Sbjct: 498 SARLVKMGHAP-NSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFS 556
Query: 320 TNGMKNHAKE-FQDLVEKMDETCLA 343
G + A E Q++V + LA
Sbjct: 557 RRGHTSMAMELLQEMVREGHTPALA 581
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C +T +FTA + ++A +L + M+ T DC PDV Y+ LI KA D+
Sbjct: 85 CQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRA 144
Query: 83 QALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
+ + +G +PN V+++TL+ + + +ML + DV N +
Sbjct: 145 LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIH 204
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
G + + + T+ IL++++ +AG ++++ ME + +
Sbjct: 205 CTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCAL 264
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+ V YN +I F R G L + LF ++ P T +L+ A + + E+ ++
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLF 323
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + ++LD ++ L+DA+G+ A+ V MQ+ GC PD V Y ++
Sbjct: 324 QEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQ 383
Query: 322 GMKNHAKEFQDLVEKMD 338
G + A E L+E M+
Sbjct: 384 GKVDEALE---LLEDMN 397
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 146/345 (42%), Gaps = 14/345 (4%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDA--NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L + ++ E+A LF M E CD + ++ L++ Y ++G D+A + +K C
Sbjct: 99 LCEVRRVEQAMTLFDDM-RETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSC 157
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P+ ++ L+ K A+ +M G++ + NTLI R M +
Sbjct: 158 KPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARR 217
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M + C D +T + A +GQ+ + E + G S +N ++ +
Sbjct: 218 LLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFI 277
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G + + + E + TYN++I A ++ L++ LF+ +
Sbjct: 278 RCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVF 336
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ A+G AG+ K V + + M DTV +N L+ G+ E +LE M
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396
Query: 300 QQRGCKPDKVTYRTMV----------RAYSTNGMKNHAKEFQDLV 334
++G PD TY ++ +AYS GM K D+V
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 441
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + KA E+F M GC +T + L+S G+ G D+A LLE M N P
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIMP 403
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D TY+I+I ++K + M + P+ VTYNTL++ + + E
Sbjct: 404 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + C PD+ T + +G+++ + + G P+ +N L+ + ++
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRS 523
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G +K + + M + +TY I++ F R G L + M E P+ T
Sbjct: 524 GQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATY 583
Query: 242 CSLVRAYGHAGKPE 255
L+R+ AG+ E
Sbjct: 584 NVLIRSLSMAGQVE 597
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 1/207 (0%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L C + EKA+ F M + ++ LL+ + D+A L + M+ C
Sbjct: 414 VLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK-CM 472
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ T+ LI + KA + + + G PN+ YN LI + R+ +
Sbjct: 473 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYEL 532
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ C PD T + F G + ++ G P++ T+N+L+ S
Sbjct: 533 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 592
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYN 207
AG E + + M ++ + TY+
Sbjct: 593 AGQVEDAYTLFKEMIAKGFNPDMQTYS 619
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
Y+ AG+ +T ++ K G E ++ ++ +++ + VT I AFGR
Sbjct: 6 YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65
Query: 216 AGDL-KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI-DNSDIMLDT 273
AGDL M L + R +P V + + + E+ ++ + + D D
Sbjct: 66 AGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRG-CKPDKVTYRTMV 315
V +N L+ Y + + ++Q G CKP+ V++ T+V
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLV 168
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 158/329 (48%), Gaps = 4/329 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K ++A + F+ M + G + +T L+ + R+G+ +A + + M C
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ-GCV 304
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ ++ K + L ++M+ +G+ P+ T+ TLI+ Y + +
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ + +PDV T N + F +++ + + + S I P+ ++ IL++ Y
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 424
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + M + + TI+T N ++ + RAG+ + + M + I P +T
Sbjct: 425 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 484
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + ++ +++ ++NS ++ D + +N +++ + R E + ++ M
Sbjct: 485 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 544
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+RG PD+ TY +++ + T +N+ KE
Sbjct: 545 ERGVNPDRSTYTSLINGHVT---QNNLKE 570
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 8/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E M ++G + ++ L++AY R GL ++AF L++ M +P
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 165
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ +I K + + + +L +M G+ P+T TYN L+ R + E
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S+ PD+ + + + +G +D K + ++AG+ P + IL+ + +
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V + M + +VTYN +++ + L + + LF M + P T
Sbjct: 286 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV--- 298
+L+ Y G K ++ + ++ D V +N L+D + + +EM+ V E+
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK---GSEMEKVNELWND 402
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
M R P+ ++Y ++ Y G + A + + ++VEK
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C +N F L+ Y ++ + +K+ C +N + L+ +K D
Sbjct: 23 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLC-VSINACNSLLGGLVKVGWVDLA 81
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ ++ G++ N T N +I+A + + + L M + PDV T N + A
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G ++ + + G++P + T+N +++ K G + + V++ M K S
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
TYNI++ R ++ E +F M S+ + P V+ +L+ G ++ R
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N+ + D V + L+ + R +E V + M ++GC D VTY T++
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321
Query: 323 MKNHAKE-FQDLVEK 336
M + A E F ++ E+
Sbjct: 322 MLSEADELFTEMTER 336
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L+ MV++G +A + ++ Y R+G KA L +M PD TY+ L
Sbjct: 430 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGIVPDGITYNTL 488
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +K D+ AL++ M G+ P+ +TYN +++ + R E EL ++KM+
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 548
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + + + +++ G P
Sbjct: 549 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E M+ +G + ++ L++ + + D+AF+L+ M+N+ PDV TY+++
Sbjct: 465 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITYNVI 523
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + + + ++ M +G+ P+ TY +LI+ + E +ML
Sbjct: 524 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
Query: 130 EPD 132
PD
Sbjct: 584 VPD 586
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+++ +E + + G P + F++L+ +Y +A + ++ +I N
Sbjct: 9 RVEIVESLVLTYGNCGSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
++ + G + +++ + ++ + TL ++ A K E S L ++
Sbjct: 67 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ D V +N L++AY R E +++ M +G KP TY ++ G A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186
Query: 328 KEFQD 332
K D
Sbjct: 187 KGVLD 191
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 16/343 (4%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+D+ N ++ ++++A ++ DKA +L M + PD TY+ ++ +
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSG 165
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ L M + G+ P+ VTYN+L+D + E M +PD+ T
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L+ + G + M + GI P+ F+IL+ +Y K E+ V M++
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ VTY VID ++G ++ F M E ++P + SL+ + K EK
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY------ 311
+ + + I L T+FFN ++D++ + E + ++M + G KPD +T
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEA 405
Query: 312 RTMVRAYSTNGMKNHAKEF---------QDLVEKMDETCLAMK 345
+ + A+S+NG+ + + Q L+E++D+ L+M+
Sbjct: 406 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 448
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 130/310 (41%), Gaps = 9/310 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYS 67
E A +F ++ G + S+ LL+ +A LL M + DC PDV +YS
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+I K DK M Q I PN VTYN++I A +A+ + L M+
Sbjct: 93 TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD T N + F +SGQ +K +S G++P + T+N L+D K G +
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M K I TY ++ + G L +M L LM I P+ LV A
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y K E+ V + + + V + ++D + + E M G +PD
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Query: 308 KVTYRTMVRA 317
+ Y +++ +
Sbjct: 326 SIVYNSLIHS 335
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 29/304 (9%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G+C + A ++F +M G + ++ LL Y G + LL+ M P+
Sbjct: 200 GRCTE---ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPN 255
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+SIL+ + K ++ + S M QG+ PN VTY T+ID ++ + L
Sbjct: 256 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFE 315
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ E PD N + + + + E+ + + GI S FN ++DS+ K G
Sbjct: 316 QMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375
Query: 183 HFEKMSAVMEYMQKYHYSWTIVT-------------------------YNIVIDAFGRAG 217
+ + + M + I+T Y ++ + G
Sbjct: 376 RVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 435
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
L++++ LF M L +VR G+ + G+ L ID L+ +
Sbjct: 436 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS 495
Query: 278 CLVD 281
+D
Sbjct: 496 LFID 499
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 81/211 (38%), Gaps = 11/211 (5%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K + E A F+ M+DEG ++ + +L+ + ++KA L M + C
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 359
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ SI+ C + + + L M G++P+ +T GR E +
Sbjct: 360 STIFFNSIIDSHCKEGRVIESGK-LFDLMVRIGVKPDIIT-------LGRND---EAKDL 408
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
V S P+ WT G ++ +++ + + G N ++ +
Sbjct: 409 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 468
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
G + + + + H+S T ++ ID
Sbjct: 469 RGEITRAGTYLSMIDEKHFSLEASTASLFID 499
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 5/344 (1%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+ E L M + GC + S+ ++ + +A +L M C PDV +
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVS 274
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+++I K L ++M +G+ PN VTYN+++ A +A+ + EL L +M
Sbjct: 275 YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMF 334
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD T + + G+ K +++ G+ P I TFN L+DS K +
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSK 394
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + + + + I++Y+I++ + G M LF M I L+
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
A+ G ++ + + + + V + ++ A R+ A+ L M G K
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P+ V Y ++++ + T+G AKE + E MD+ + RP+
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKEL--VSEMMDQ---GIPRPNI 553
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 2/307 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
+ LF +M D G A++ F L++A+ + G+ D+A + M+ P+V TY+ +I
Sbjct: 432 NNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ-GVSPNVVTYATVIA 490
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSEDCE 130
+ + LS M + G++PNTV Y++LI + + EL M
Sbjct: 491 ALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPR 550
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ + + + N G++ + + G +P I TFN L+D Y G +K V
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGV 610
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M +VTY+ +I+ + ++G + LFR M +R+KP+ VT ++
Sbjct: 611 LDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFR 670
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ + + S + + ++ R C E + + K +
Sbjct: 671 AGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAI 730
Query: 311 YRTMVRA 317
TM+ A
Sbjct: 731 LNTMIHA 737
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 154/357 (43%), Gaps = 26/357 (7%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
G + E L + +GC + S+T ++ G KA +L M P+
Sbjct: 248 GGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQK-GVVPN 306
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GR----AKMFA 115
V TY+ ++ + KA A DK + +L M I+P+ VTY +I Y GR AKMF
Sbjct: 307 VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
EM E PD+ T N + + + + + + G +P I +++ILL
Sbjct: 367 EMT-------REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
Y G F M+ + M +NI+I+A + G + + +F MR + +
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEM 292
P+ VT +++ A G+ L + + + +TV ++ L+ + G L E+
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
V E+M Q +P+ + +++ + G +A++ +LV + + RPD
Sbjct: 540 --VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD------RPDI 588
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 13/327 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRS----------GLFDKAFSLLEHMKNTPD 58
E AH LF ++ + + ++ L+A R+ L F+ + + P
Sbjct: 100 EDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPR 159
Query: 59 CQP-DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P V+TY IL+ C +A D A + + G+R + + NT + AK E
Sbjct: 160 VVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEA 219
Query: 118 ELTLVKMLSE-DCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
L+ +SE C PD ++ N +++ G S + ++ + G P + ++ +++
Sbjct: 220 LSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVI 279
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
G K + M + +VTYN ++ A +A + + E + R M I+
Sbjct: 280 HGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQ 339
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P VT +++ Y G+ ++ + + + ++ D V FN L+D+ + K E +
Sbjct: 340 PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ +G KPD ++Y ++ Y+T G
Sbjct: 400 FHSIATKGHKPDIISYSILLHGYATEG 426
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 2/322 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +KA + + M D + ++TA++ Y G + +A + + M P
Sbjct: 317 LCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTRE-GLIP 375
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ T++ L+ S K + + ++T+G +P+ ++Y+ L+ Y F +M
Sbjct: 376 DIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLF 435
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M D N + A G +D + + + G+ P++ T+ ++ + +
Sbjct: 436 HSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI-KPSCVT 240
G + M V Y+ +I F GDL + + L M + I +P+
Sbjct: 496 GRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
S++ + + G+ V + + D FN L+D Y + + GVL+ M
Sbjct: 556 FSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
G +PD VTY T++ Y +G
Sbjct: 616 SAGTEPDVVTYSTLINGYFKSG 637
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 138/335 (41%), Gaps = 3/335 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A E M+ G NT + +L+ + G KA L+ M + +P++ +S +I
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
S Q + + + G RP+ T+N+LID Y + L M+S E
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV T + + + SG+ID + + ++P+ T++++LD +AG +
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + +I TY I++ R + LF + + +K L +++ A
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+ E+ + + S ++ + + ++ + E + M++ GC P
Sbjct: 741 VKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRL 800
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMK 345
++R G A + + K+D T ++++
Sbjct: 801 LNDIIRMLLQKGEIVKAGYY---MSKVDGTIISLE 832
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 10 KAHELFQAMVDEGCD-ANTQSFTALLSAY---GRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
KA EL M+D+G N F++++ + GR F+L+ H+ + +PD+ T
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD----RPDIFT 590
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ LI DK +L M + G P+ VTY+TLI+ Y ++ + + +ML
Sbjct: 591 FNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREML 650
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ +P T + L +G+ +K + + +G SI+T+ I+L + +
Sbjct: 651 CKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTD 710
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + + + + I N +I A + ++ LF + + + P+ T
Sbjct: 711 EAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAST 765
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/245 (17%), Positives = 99/245 (40%), Gaps = 1/245 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA + AMV G + + +++ L++ Y +SG D L M +P TYS+
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREML-CKRVKPTTVTYSL 663
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++ +A + + +M G + TY ++ R E K+ + +
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ ++ +N + A + + + ++G+ P+ +T+ +++ + K G E+
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEAD 783
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M+K + + N +I + G++ + Y + I T L+ +
Sbjct: 784 IMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLF 843
Query: 249 GHAGK 253
G+
Sbjct: 844 ASKGR 848
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 2/213 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF+ M+ + T +++ +L R+G A + M + ++TY+I+++
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM-SISTYTIILQGL 703
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
+ D+ L + ++ NT+I A + K E + + P+
Sbjct: 704 CRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNA 763
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
T + G ++ + + + G PS N ++ + G K M
Sbjct: 764 STYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSK 823
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLK-QMEYL 225
+ S T +++I F G + Q+++L
Sbjct: 824 VDGTIISLEASTTSLLISLFASKGRYREQIKFL 856
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 12/311 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A ++ M G N ++ AL+ YGR+G + ++++ M + PD YS
Sbjct: 129 ELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEM-SRDGFGPDSFVYSK 187
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I + K ++ ++ G+ + YN++ID +G+ +E KM E
Sbjct: 188 VIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEG 247
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD+ T N ++ +G + + + K Q G+ P F ++ G+ G ++ +
Sbjct: 248 VKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIK 307
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
E M+ + + Y I++D +G+ G + E ++SE I+PS C L AY
Sbjct: 308 RNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAY 367
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYG-------RLKCFAEMKG----VLE 297
G E+ VL+ ++ I + + N L++A+G L + +K + E
Sbjct: 368 AQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTVPEIYE 427
Query: 298 VMQQRGCKPDK 308
M+ GC PD+
Sbjct: 428 EMESAGCTPDR 438
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 144/327 (44%), Gaps = 1/327 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA +L M G + S+T ++ A G G +A ++ M + + D+ Y++
Sbjct: 59 DKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHL-GLKLDLRVYNV 117
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+++SCL+ + +L++M GI N TY L+D YGRA ++ + +M +
Sbjct: 118 MLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDG 177
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PD + + + + ++G + + + G+ +N ++D++GK G +
Sbjct: 178 FGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEAL 237
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
V E MQ+ I+T+N +I +AGD+ + LF M+ E + P +++
Sbjct: 238 EVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRL 297
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK + + + + LVD YG+ F + + ++ G +P
Sbjct: 298 GEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSA 357
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ + AY+ G+ + L+E
Sbjct: 358 SMFCVLANAYAQQGLCEQTVKVLQLME 384
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 35/293 (11%)
Query: 65 TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKM 124
Y+ I+ + DK LL+ M G + +Y T+I+A G E E +M
Sbjct: 44 VYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREM 103
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
+ + D+ N LR+ G ++ +K + + GI + T+ L+D YG+AG
Sbjct: 104 VHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRL 163
Query: 185 EKMSAVMEYMQK-------YHYSWTIVT----------------------------YNIV 209
+ AV+ M + + YS I YN +
Sbjct: 164 NDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSI 223
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
ID FG+ G+L + +F M+ E +KP +T SL++ + AG K + + +
Sbjct: 224 IDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGL 283
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
D F ++ G + +K E M+ RG + Y +V Y G
Sbjct: 284 YPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYG 336
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 40/277 (14%)
Query: 101 YNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 160
+ TLI+ + + K +E + E+ V+ N +R G +D K + +
Sbjct: 12 FPTLINTHMKNKHQVSVEEVSISENGEELSGVVY--NARIRESCRVGDVDKAMKLLAQME 69
Query: 161 SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 220
+ G S+ ++ ++++ G G + A+ M + YN+++ + R G L+
Sbjct: 70 ALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLE 129
Query: 221 QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL------------------- 261
+ + M + I + T +LV YG AG+ + +V+
Sbjct: 130 LADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVI 189
Query: 262 ----------------RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
R I + LD +N ++D +G+ +E V E MQ+ G K
Sbjct: 190 GVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVK 249
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
PD +T+ ++++ + G A E L KM E L
Sbjct: 250 PDIMTWNSLIQWHCKAGDVGKALE---LFSKMQEEGL 283
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 39/373 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K L Q M EG + N +F L++ + + GL AFS+L + +P
Sbjct: 78 LVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKM-GYEP 136
Query: 62 DVNTYSILIKS-CLKA----------------FAFDKVQ------------------ALL 86
D+ T + IK CLK F D+V LL
Sbjct: 137 DIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLL 196
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
+ + ++ N V YNT+ID + K + +M+++ PDV T + +R F
Sbjct: 197 RRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIV 256
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ + K I+P + TFNIL+D + K G +K V++ M + T+
Sbjct: 257 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTF 316
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N ++D F + +K+ + +F +M + IKP+ VT CSL+ Y + K + +
Sbjct: 317 NTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ 376
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + +N +++ + ++K + + M + PD VTY +++ +G ++
Sbjct: 377 RGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISY 436
Query: 327 AKEFQDLVEKMDE 339
A FQ LV +M +
Sbjct: 437 A--FQ-LVNEMHD 446
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 6/256 (2%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
++ ++ S +K+ + V +L M +GI PN VT+N LI+ + + + L K+L
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
EPD+ T+N ++ F GQI ++K + G ++ L++ K G
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ + V YN VID + + L+ M ++RI P VT +L+
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQR 302
R + GK + + + +I D FN LVD + GRLK + K VL++M +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLK---KAKNVLDMMMIQ 307
Query: 303 GCKPDKVTYRTMVRAY 318
KP+ T+ T+V +
Sbjct: 308 DIKPNVSTFNTLVDGF 323
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 1/246 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K K A +L+ MV + + +++AL+ + G A L M + +P
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI-LENIKP 276
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T++IL+ K K + +L M Q I+PN T+NTL+D + + + E +
Sbjct: 277 DVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVF 336
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M+ + +P+V T + + Q++ +K + G+ +++++NI+++ + K
Sbjct: 337 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKI 396
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+K + M H +VTYN +ID ++G + L M P+ +T
Sbjct: 397 KKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITY 456
Query: 242 CSLVRA 247
S++ A
Sbjct: 457 NSILNA 462
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C KQ KA ++F M G AN S+ +++ + + DKA L M +
Sbjct: 355 MDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH-KH 413
Query: 59 CQPDVNTYSILI----KSCLKAFAFDKVQ-------------------ALLSDMSTQGIR 95
PDV TY+ LI KS ++AF V ALL+ + QGI+
Sbjct: 414 IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQ 473
Query: 96 PNTVTYNTLI 105
PN T LI
Sbjct: 474 PNMHTDTILI 483
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 3/318 (0%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A L + M++ G + ++ L+S + G ++ F L M +
Sbjct: 500 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIE 558
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY++LI + D+ L ++ ++ + PN TY +ID Y +A E E
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
++L+++ E + N +RA+ +G K ++ +S GI P+ T++ L+
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E +++ M+K +V Y +I + + G + ++ + + M S I P+ +T
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ Y +G + +L + I+ DTV +N L + + + E + + M
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 301 QRGCKPDKVTYRTMVRAY 318
Q G D++TY T+V +
Sbjct: 799 QEGLPLDEITYTTLVHGW 816
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 147/322 (45%), Gaps = 3/322 (0%)
Query: 3 GKCKQPEK--AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A EL+ ++++G AN + AL+ ++G +A LL+ M
Sbjct: 465 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+ TY+ LI C K ++ L +M QGI P+T TYN LI R E
Sbjct: 525 DKI-TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ S D P+V+T + + + +I+ EK + + + ++ + +N L+ +Y +
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ + + + M+ T TY+ +I G ++ + L MR E + P+ V
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ Y G+ +K+ +VL+ + + DI + + + ++D Y + +L M
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
+G PD VTY + + G
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEG 785
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E+ +LF ++ + + N+ + L+ AY R+G +AF L + M+ +
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR-SKGIP 663
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P TYS LI + + L+ +M +G+ PN V Y LI Y + ++
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 723
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M S D P+ T + + SG + T K + GI P T+N+L + + K
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
G E+ + +YM + +TY ++ + + L E
Sbjct: 784 EGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQE 826
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 9/313 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A +LF M G N ++ L+ + G D+AF E M + TYS+
Sbjct: 263 EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD-GVNATLITYSV 321
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI +K F++ ++L + +G PN V YNTLID Y + + M+S+
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T+N ++ F GQ++ E E+ S G + F ++ FE
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLVRA 247
+ M + ++ + G +E FRL+ + + VT +L+
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE-KGFGANLVTTNALIHG 500
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA---YGRLKCFAEMKGVLEVMQQRGC 304
G ++ +L+ + +LD + +N L+ G+++ +++G M ++G
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG---EMVKQGI 557
Query: 305 KPDKVTYRTMVRA 317
+PD TY ++
Sbjct: 558 EPDTFTYNLLIHG 570
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F+ + ++G ++ T LLS+ ++ +K++ + E M+ PDV +S I +
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ--GVSPDVYLFSTAINAF 256
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K + L DM G+ PN VTYN LI +G K
Sbjct: 257 CKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLI--HGLCK--------------------- 293
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
G +D + EK G+ ++ T+++L++ K F + ++V++
Sbjct: 294 ------------HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 341
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
+ ++ V YN +ID + + G+L + M S+ I P+ VTL S+++ + G+
Sbjct: 342 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 401
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
E+ +L + + ++ F ++ F L M R +P+ T
Sbjct: 402 MEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461
Query: 314 MVRAYSTNGMKNHAKEF 330
+V G + A E
Sbjct: 462 LVGGLCKEGKHSDAVEL 478
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 133/320 (41%), Gaps = 3/320 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYSILIKSCLKA 76
MV +G + N+ + +++ + + G ++A +LE M + P T +I+ C+ +
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT-TIIHWLCMNS 435
Query: 77 FAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTM 136
F+ L +M + +RPN TL+ + ++ ++L + ++ T
Sbjct: 436 -RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N + +G + + +K G T+N L+ K G E+ + M K
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
TYN++I R G L + L+ +S + P+ T ++ Y A K E+
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ + ++ L++V +N L+ AY R E + + M+ +G P TY +++
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674
Query: 317 AYSTNGMKNHAKEFQDLVEK 336
G AK D + K
Sbjct: 675 GMCNIGRMEDAKCLIDEMRK 694
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 155/326 (47%), Gaps = 4/326 (1%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS- 72
+++ M+ N +F ++ ++G +KA ++E +K P++ TY+ LI
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK-AWGFSPNIVTYNTLIDGH 245
Query: 73 CLKAFAFD--KVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
C K A + A+L +M I PN +T+NTLID + + + + +M + +
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + N+G++D ++K G++P+I TFN L++ + K ++ +
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
+ + + +T+N +IDAF +AG +++ L M E I P+ T L+
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR 425
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
+L ++N ++ D V +N L+ + + ++ + +L M G KP+ VT
Sbjct: 426 NQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVT 485
Query: 311 YRTMVRAYSTNGMKNHAKEFQDLVEK 336
Y T++ Y G A + + +EK
Sbjct: 486 YNTLMDGYCMEGNLKAALKVRTQMEK 511
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 6/314 (1%)
Query: 3 GKCKQPE-----KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP 57
G CK+ +A + + M+ N +F L+ + + A + E M+
Sbjct: 244 GHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ- 302
Query: 58 DCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEM 117
+P++ TY+ LI D+ AL M G++PN VT+N LI+ + + KM E
Sbjct: 303 GLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA 362
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +D P+ T N + AF +G ++ + GI P+++T+N L+
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAG 422
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
+ + ++ M+ Y +VTYNI+I + + G+ + E L M + +KP+
Sbjct: 423 LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPN 482
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
VT +L+ Y G + V ++ + V +N L+ + + + +L
Sbjct: 483 HVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLN 542
Query: 298 VMQQRGCKPDKVTY 311
M ++G P++ TY
Sbjct: 543 EMLEKGLNPNRTTY 556
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 131/306 (42%), Gaps = 38/306 (12%)
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN------------------------- 97
+N+ + L+ + +K ++Q + +M + I+PN
Sbjct: 165 LNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIE 224
Query: 98 ----------TVTYNTLIDAY---GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
VTYNTLID + G A + L +ML+ P+ T N + F
Sbjct: 225 DIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFC 284
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ + +E+ Q G++P+I T+N L++ G ++ A+ + M IV
Sbjct: 285 KDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIV 344
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
T+N +I+ F + +K+ LF + + + P+ +T +++ A+ AG E+ ++ +
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ I + +NCL+ R + K +L M+ K D VTY ++ + +G
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEP 464
Query: 325 NHAKEF 330
+ A++
Sbjct: 465 SKAEKL 470
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 52/253 (20%)
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
AL++DM + Y T ++ + ++F ++ K+ C P L A
Sbjct: 129 NALITDMLV-------LAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNP-------LLSA 174
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ M+ Y++ IQP++ TFNI ++ KAG K V+E ++ + +S
Sbjct: 175 LVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234
Query: 203 IVTYNIVIDAF---GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
IVTYN +ID G AG + + + + + M + +I P+ +T
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEIT------------------- 275
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
FN L+D + + + K E MQ++G KP+ VTY +++ S
Sbjct: 276 ----------------FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319
Query: 320 TNGMKNHAKEFQD 332
NG + A D
Sbjct: 320 NNGKLDEAIALWD 332
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 3 GKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK AH +L M G N + +LL AY R D+ +L+ M+N +
Sbjct: 76 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN-EGIE 134
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+IL+ A KV+A+ +M ++ + + Y+++I+AY RA
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + EP+ T + F GQ++ E Q G+ + FN ++D Y +
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+K + M+K + TYN + RA + + + L R+M + ++P+ V+
Sbjct: 255 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 314
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + + G + + R + + V +N ++D Y + E + M+
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
++G PD +Y +V + NG
Sbjct: 375 KKGLVPDIYSYAALVHGHCVNG 396
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 136/310 (43%), Gaps = 5/310 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--YSILIKSCLKAFAFDKVQALL 86
S + ++ Y +SG A LL+ M P VN Y+ L+ + + D+V +L
Sbjct: 69 SASVVVDGYCKSGRVAHARQLLDEM---PRHGVKVNALCYNSLLDAYTREKDDDRVAEML 125
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +GI P TY L+D A+ ++E +M S++ DV+ + + A+ +
Sbjct: 126 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 185
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + +++ GI+P+ +T+ L++ + K G E ++ MQ + +
Sbjct: 186 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 245
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +ID + R + + + +M I+ T +L A + ++ ++LR +
Sbjct: 246 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 305
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + V + L+ + E + + M G +P VTY M+ Y G
Sbjct: 306 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 365
Query: 327 AKEFQDLVEK 336
A+ F++ +EK
Sbjct: 366 AERFKNEMEK 375
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 42/334 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K +F+ M + + ++++++AY R+G +A + + +P
Sbjct: 147 LSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGN-GIEP 205
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF---AEME 118
+ +TY LI K + + L++DM +G+ N + +NT+ID Y R M E++
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + KM E DV+T N + ++D + G++P+ ++ L+ +
Sbjct: 266 MIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 322
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G + + M ++VTYN+++D + + G +++ E M + + P
Sbjct: 323 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI 382
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ +LV +GH N VD L+ F EMK
Sbjct: 383 YSYAALV--HGHC------------------------VNGKVDV--ALRLFEEMK----- 409
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
QRG KP+ V Y ++ + G A + D
Sbjct: 410 --QRGSKPNLVAYTALISGLAKEGRSEEAFQLYD 441
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 1/242 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A L M G N F ++ Y R + DKA + M+ + DV
Sbjct: 219 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM-GIELDV 277
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ L +A D+ + LL M +G+RPN V+Y TLI + E +
Sbjct: 278 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 337
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M EP + T N + + G I E+ + + G+ P I ++ L+ + G
Sbjct: 338 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 397
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + E M++ +V Y +I + G ++ L+ M + + P +
Sbjct: 398 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 457
Query: 244 LV 245
LV
Sbjct: 458 LV 459
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFG--NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L+K + C V ++ ++ G SG++ + ++ G++ + +N LLD+Y
Sbjct: 53 LLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAY 112
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++++ +++ M+ T+ TY I++D A D+ ++E +F M+S+ +
Sbjct: 113 TREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDV 172
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
S++ AY AG + V + I + + L++ + ++ + ++
Sbjct: 173 YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTD 232
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MQ RG +++ + TM+ Y M + A E + ++EKM
Sbjct: 233 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM 271
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P+KA +LF M + GC + SF +L +S +KA+ L ++ D TY
Sbjct: 139 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR--FSADTVTY 196
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ K +L +M +GI PN TYNT++ + RA + ++M
Sbjct: 197 NVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKK 256
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+CE DV T + FG +G+I +++ G+ PS+ T+N + K E
Sbjct: 257 RNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVEN 316
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ E M + Y + TYN++I AG + E L + M +E +P+ T ++R
Sbjct: 317 AVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIR 376
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA 282
Y + EK + + D + + +N L+
Sbjct: 377 YYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISG 412
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ KA E+ + MVD G + N ++ +L + R+G +A+ MK +C+ DV T
Sbjct: 207 KRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKR-NCEIDVVT 265
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ ++ A + + + +M +G+ P+ TYN I + + +M+
Sbjct: 266 YTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMV 325
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+ EP+V T N +R ++G+ E+ ++ ++ G +P+ T+N+++ Y + E
Sbjct: 326 RKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 385
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDA 212
K + E M + TYNI+I
Sbjct: 386 KALGLFEKMGTGDCLPNLDTYNILISG 412
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 123/294 (41%), Gaps = 2/294 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+ SF + R + +SL+ M++ P T++I+ + + DK L
Sbjct: 88 DASSFDLAIDIAARLHIHPTVWSLIHRMRSL-RIGPSPKTFAIVAERYASSGKPDKAVKL 146
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M G + ++NT++D ++K E L + L D T N + +
Sbjct: 147 FLNMHEHGCFQDLASFNTILDVLCKSKR-VEKAYELFRALRGRFSADTVTYNVIVNGWCL 205
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ + ++ GI P++ T+N +L + +AG + M+K + +VT
Sbjct: 206 IKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVT 265
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y V+ FG AG++K+ +F M E + PS T + ++ E + +
Sbjct: 266 YTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMV 325
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS 319
+ +N L+ F+ + +++ M+ GC+P+ TY M+R YS
Sbjct: 326 RKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 379
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 126/288 (43%), Gaps = 2/288 (0%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F + Y SG DKA L +M + C D+ +++ ++ K+ +K L
Sbjct: 125 KTFAIVAERYASSGKPDKAVKLFLNM-HEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 183
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
+ + +TVTYN +++ + K + L +M+ P++ T N L+ F +G
Sbjct: 184 ALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAG 242
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
QI + + + + + + T+ ++ +G AG ++ V + M + ++ TYN
Sbjct: 243 QIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYN 302
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I + ++ +F M + +P+ T L+R HAGK + +++ ++N
Sbjct: 303 AFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENE 362
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+ +N ++ Y + G+ E M C P+ TY ++
Sbjct: 363 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILI 410
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 122/290 (42%), Gaps = 11/290 (3%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D +++ + I + V +L+ M + I P+ T+ + + Y + +
Sbjct: 88 DASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLF 147
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINT--FNILLDSYG 179
+ M C D+ + N L S ++ EK YE F++ + S +T +N++++ +
Sbjct: 148 LNMHEHGCFQDLASFNTILDVLCKSKRV---EKAYELFRALRGRFSADTVTYNVIVNGWC 204
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K V++ M + + TYN ++ F RAG ++Q F M+ + V
Sbjct: 205 LIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVV 264
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++V +G AG+ ++ +V + ++ +N + + + E M
Sbjct: 265 TYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEM 324
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
++G +P+ TY ++R G + +E +E +E C P+F
Sbjct: 325 VRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRME--NEGC----EPNF 368
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 152/327 (46%), Gaps = 2/327 (0%)
Query: 12 HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIK 71
H+L +A +D G ++ L++ Y + G KA + MK + NTYS+L+
Sbjct: 287 HKL-KARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMK-AQGITLNRNTYSMLVD 344
Query: 72 SCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
++ F ++ DMS GI P+ VTYN L+ A+ +++ L +M + C P
Sbjct: 345 GYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSP 404
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+ T + F +G + K + + AG +P+ T+N+++ + + G ++ ++V+
Sbjct: 405 TIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVI 464
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
+ M+ +Y ++ F G++ + + KP ++ SL++A A
Sbjct: 465 DEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKA 524
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ + +V + + + ++ FN L+D + + E G+++ M+Q G PD +Y
Sbjct: 525 GRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSY 584
Query: 312 RTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ V A G A E + +++ D
Sbjct: 585 TSFVNACCKAGDMQKATETIEEMKQQD 611
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 141/304 (46%), Gaps = 10/304 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K +Q +A +L M GC Q++ ++ + ++G A+ + MK C+P+
Sbjct: 383 KSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMK-LAGCRPNA 441
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL-- 121
TY++++ + ++ D+ +++ +M G++PN +Y TL+ + E+ L
Sbjct: 442 TTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFAS---IGEIGLAFKC 498
Query: 122 VKMLSEDCE-PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+K ++E + P + + L+A +G++ E+ AG+ + FN LLD + +
Sbjct: 499 LKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQ 558
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + +M+ M++ ++ I +Y ++A +AGD+++ M+ + ++P+ T
Sbjct: 559 RGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQT 618
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE---MKGVLE 297
L+ + PEK + + ++ D + C+V + A GVL+
Sbjct: 619 YTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLSKAAIARETVRNGVLQ 678
Query: 298 VMQQ 301
V +
Sbjct: 679 VTSE 682
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 3/256 (1%)
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y++LI K + M GI + YN LI AY A+ + +M
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E P+ T + + +G+SG ++ EK +++ S ++ ++ ++ +Y KAG+ E
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE---RIKPSCVTLC 242
+ A++ M++ T+ YNI++D + R Q +F +++ + P+ VT
Sbjct: 246 RAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYG 305
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ Y GK K + + I L+ ++ LVD Y +L FA V E M +
Sbjct: 306 CLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEA 365
Query: 303 GCKPDKVTYRTMVRAY 318
G +PD VTY +++A+
Sbjct: 366 GIEPDWVTYNILLKAF 381
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 17/326 (5%)
Query: 6 KQPEKAHELFQAM--VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+QP++ ++ A +D+ + + + L+ YG+ G A E M+ V
Sbjct: 103 EQPKEVRKVVNAFKRIDKAVE---RDYALLIHYYGKRGDKRGARVTFEKMR-AAGIDSSV 158
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
+ Y+ LI++ + A + + +M +GI PN T++ +I YG + E +
Sbjct: 159 HAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQR 218
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA-- 181
+SE+ +V + + A+ +G ++ E + G++ ++ +NIL+D Y +
Sbjct: 219 SVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHI 278
Query: 182 -----GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
F K+ A ++ S T VTY +I+ + + G + + + M+++ I
Sbjct: 279 EAQCLNVFHKLKARID----TGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITL 334
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
+ T LV Y G SV + + I D V +N L+ A+ + + +L
Sbjct: 335 NRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLL 394
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNG 322
M+ RGC P TY T++ + G
Sbjct: 395 GRMKTRGCSPTIQTYITIIDGFMKTG 420
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+G G +EK ++AGI S++ +N L+ +Y A + + + +E M+
Sbjct: 133 YGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPN 192
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
T++ +I +G +G+++ E F+ SE + S++ AY AG E+ +++
Sbjct: 193 AATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVA 252
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR---GCKPDKVTYRTMVRAYS 319
++ + +N L+D Y R A+ V ++ R G P VTY ++ Y+
Sbjct: 253 DMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYT 312
Query: 320 TNGMKNHAKEF 330
G A EF
Sbjct: 313 KLGKMMKALEF 323
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 9/332 (2%)
Query: 3 GKCKQPEKA--HELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A LF+ M + GC N +++ L+ + + ++A + +MK D
Sbjct: 89 GLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK-AKDIS 147
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY+ LI+ + + ALL++M++ I PN VT+N L+D + + E
Sbjct: 148 PTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGV 207
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M EPDV T N + + ++ K ++ + G +P + +++IL++ Y K
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
A ++ + M + V+YN +I + G L++ + LF+ M + P+ T
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLE 297
L+ + G K + R + ++ + + V +N LV+A G LK E+ L
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF 387
Query: 298 VMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
V+ G +P+ Y T++ G+ + A E
Sbjct: 388 VI---GLQPNVQIYTTIINGLCKEGLLDEALE 416
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 1/277 (0%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ T +ILI + D ++L+ G++P VT+ TLI+ G+ FA+
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M++ C+PD +T + G+ ++K + AG Q ++ T++ L+ S K
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ + YM+ S TI TY +I K+ L M S I P+ VT
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV + GK VL+ + + D V +N L+ Y E + + +VM
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+GCKPD +Y ++ Y + AK+ F +++ +
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ 284
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 1/301 (0%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
G +FT L++ G+ G F +A L + M CQPD TY+ +I K
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV-ARGCQPDDYTYTTIINGLCKIGETAL 98
Query: 82 VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLR 141
L M G + N VTY+TLI + + + E M ++D P ++T ++
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158
Query: 142 AFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
N + + S I P++ TFN+L+D++ K G V++ M +
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
+VTYN ++ + ++ + LF +M ++ KP + L+ Y A + ++ +
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
+ + + V +N L+ +L E + + + M G P+ TY ++ +
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338
Query: 322 G 322
G
Sbjct: 339 G 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 133/302 (44%), Gaps = 1/302 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A L M N +F L+ + + G A +L+ M +PDV TY+
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEM-GVEPDVVTYNS 225
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+ + + L M T+G +P+ +Y+ LI+ Y +AK E + +M+ +
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ + N + G++ + ++ + G P++ T+ ILLD + K G+ K
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ MQ + +V YNI+++A ++G+LK LF + ++P+ +++
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGL 405
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G ++ R +++ D +N ++ + + K + ++ M+ RG D
Sbjct: 406 CKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465
Query: 309 VT 310
T
Sbjct: 466 GT 467
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 149/317 (47%), Gaps = 2/317 (0%)
Query: 19 VDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFA 78
+++ C N ++ A + ++G D+A + + M PD +TY++L+ K
Sbjct: 268 MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK-GLGPDGHTYTLLVDGFCKQKR 326
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
+ + + M + G+ PN TY LID + + E +M++ + +V T N
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ +G++ + + AGI+P T+N+L+D Y K+ K ++ M+
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ + TY+++I + DL++ + M +KP+ +L++AY + E
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L+ + + ++ D +NCL+ R K E K +L M ++G KP+ TY + Y
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566
Query: 319 STNG-MKNHAKEFQDLV 334
S +G ++ + F+D++
Sbjct: 567 SKSGEIQVAERYFKDML 583
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A F+ M+++G + ++++A++ + ++G +A + T PDV Y+ L
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT-GVVPDVFLYNSL 667
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKM--FAEMELTLVKMLSE 127
I K +K L +M GI PN V YNTLI+ YG K E +M+S+
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD + + G G ++ + + Q + S++ FN L+DS+ K G +
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEA 786
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + M + IVTY I+IDA+G+A +++ E LF M + I P+ +T SL+ +
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
Y G K+ S+ + ++ I D + + + AY
Sbjct: 847 YNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 882
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 139/358 (38%), Gaps = 38/358 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+ K + KA LF M+ G + +T ++ L+ Y +S KA LL MK P
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-ARKLTP 449
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYG------------ 109
TYS+LI + K +L M G++PN Y TLI AY
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 110 -----------------------RAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
RAK E ++ LV M + +P+ T + + S
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G+I E+ ++ S+GI P+ + IL+ + G+ + + + M + I Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ +I + + G K+ +F + P SL+ + G EK + + +
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 267 SDIMLDTVFFNCLVDAYGRLKC--FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ I + V +N L++ YG K E + + M +G PD Y ++ G
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 149/368 (40%), Gaps = 43/368 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A + M+ G N ++ A++ ++G KA SL M +PD TY++
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML-MAGIEPDTWTYNL 421
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQ-----------------------------------G 93
LI LK+ K LL++M + G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
++PN Y TLI AY + + EM + L+K M++ PD++ NC + + +++
Sbjct: 482 VKPNVFMYGTLIKAYVQESRY-EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ GI+P+ +T+ ++ Y K+G + + M V Y I+I
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP-EKLGSVLRFIDNSDIML 271
G+ + F+ M + + P +++ + GK E +G L+F+ + ++
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVP 659
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYS---TNGMKNHAK 328
D +N L+ + + + + + M G P+ V Y T++ Y + + K
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFK 719
Query: 329 EFQDLVEK 336
F +++ K
Sbjct: 720 LFDEMISK 727
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 39/218 (17%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYG--RSGLFDKAFSLLEHMKNTPD 58
G CK+ EKA +L+ M+ G + N + L++ YG +SG +AF L + M +
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMI-SKG 728
Query: 59 CQPDVNTYSILIKSCLKAFAFDKV----------------------------------QA 84
PD Y ILI C K +K +
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 788
Query: 85 LLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L DM + + PN VTY LIDAYG+A+M E E + M + + P+ T L ++
Sbjct: 789 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 848
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G M ++ ++ GI + ++ +Y K G
Sbjct: 849 QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 120/321 (37%), Gaps = 26/321 (8%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
S++ L SGL +A ++LE + T +P + L++ C + F
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTR--KPPLEILDSLVR-CYREFG--------- 168
Query: 88 DMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSG 147
N ++ ID + E + +SE P + N +R +
Sbjct: 169 -------GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 148 QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYN 207
+ K Y A I P + T+ ++ ++ K G K V+ M+K + TYN
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYN 280
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS 267
I + G + + + +LM + + P T LV + + ++ + + +S
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
+ + + L+D + + E + + M RG K + VTY M+ + G
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG----- 395
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
E + +E +A PD
Sbjct: 396 -EMAKAMSLFNEMLMAGIEPD 415
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 158/329 (48%), Gaps = 4/329 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K ++A + F+ M + G + +T L+ + R+G+ +A + + M C
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ-GCV 461
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ ++ K + L ++M+ +G+ P+ T+ TLI+ Y + +
Sbjct: 462 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 521
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ + +PDV T N + F +++ + + + S I P+ ++ IL++ Y
Sbjct: 522 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 581
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + M + + TI+T N ++ + RAG+ + + M + I P +T
Sbjct: 582 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 641
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + ++ +++ ++NS ++ D + +N +++ + R E + ++ M
Sbjct: 642 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 701
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+RG PD+ TY +++ + T +N+ KE
Sbjct: 702 ERGVNPDRSTYTSLINGHVT---QNNLKE 727
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 8/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E M ++G + ++ L++AY R GL ++AF L++ M +P
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 322
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ +I K + + + +L +M G+ P+T TYN L+ R + E
Sbjct: 323 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 382
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S+ PD+ + + + +G +D K + ++AG+ P + IL+ + +
Sbjct: 383 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 442
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V + M + +VTYN +++ + L + + LF M + P T
Sbjct: 443 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV--- 298
+L+ Y G K ++ + ++ D V +N L+D + + +EM+ V E+
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK---GSEMEKVNELWND 559
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
M R P+ ++Y ++ Y G + A + + ++VEK
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C +N F L+ Y ++ + +K+ C +N + L+ +K D
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLC-VSINACNSLLGGLVKVGWVDLA 238
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ ++ G++ N T N +I+A + + + L M + PDV T N + A
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G ++ + + G++P + T+N +++ K G + + V++ M K S
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
TYNI++ R ++ E +F M S+ + P V+ +L+ G ++ R
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N+ + D V + L+ + R +E V + M ++GC D VTY T++
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478
Query: 323 MKNHAKE-FQDLVEK 336
M + A E F ++ E+
Sbjct: 479 MLSEADELFTEMTER 493
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L+ MV++G +A + ++ Y R+G KA L +M PD TY+ L
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGIVPDGITYNTL 645
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +K D+ AL++ M G+ P+ +TYN +++ + R E EL ++KM+
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 705
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + + + +++ G P
Sbjct: 706 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 122/318 (38%), Gaps = 59/318 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
L KC++ + + F + C + QSF+A++ RS + PD
Sbjct: 104 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRS-------------RRLPD 150
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEM 117
Q +I ++ +V+ + S + T G N + ++ L+ Y +A+ E
Sbjct: 151 AQA-------VILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG 203
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ S+ + N L G +D + Y++ +G+Q ++ T NI++++
Sbjct: 204 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 263
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K E + + M++ +VTYN +I+A+ R G L++ L M + +KP
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 323
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +++ GK + KGVL+
Sbjct: 324 VFTYNAIINGLCKTGK-----------------------------------YLRAKGVLD 348
Query: 298 VMQQRGCKPDKVTYRTMV 315
M + G PD TY ++
Sbjct: 349 EMLKIGMSPDTATYNILL 366
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E M+ +G + ++ L++ + + D+AF+L+ M+N+ PDV TY+++
Sbjct: 622 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITYNVI 680
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + + + ++ M +G+ P+ TY +LI+ + E +ML
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Query: 130 EPD 132
PD
Sbjct: 741 VPD 743
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Query: 140 LRAFGNSG--QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
LR SG +++ +E + + G P + F++L+ +Y +A + ++
Sbjct: 156 LRMVRKSGVSRVEIVESLVLTYGNCGSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSK 213
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+I N ++ + G + +++ + ++ + TL ++ A K E
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S L ++ + D V +N L++AY R E +++ M +G KP TY ++
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 318 YSTNGMKNHAKEFQD 332
G AK D
Sbjct: 334 LCKTGKYLRAKGVLD 348
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ + +AHEL + G T + +L+ L D A L MK C PD
Sbjct: 731 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPD 789
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++L+ + K+ +++ + +M +G VTYNT+I +++ +
Sbjct: 790 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 849
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++S+ P T L +G+I+ E + + G + + +NILL+ + AG
Sbjct: 850 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 909
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ EK+ + + M + I +Y I+ID +AG L FR + ++P +T
Sbjct: 910 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 969
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ G + + E+ S+ + I+ + +N L+ G+ AE + E + +
Sbjct: 970 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1029
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++R YS +G + A
Sbjct: 1030 GWKPNVFTYNALIRGYSVSGSTDSA 1054
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 37/357 (10%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M + G N ++ L+ +SG FD+ + + P V TYS+L+ +
Sbjct: 148 LPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYRVMMVDGVVPSVRTYSVLMVAFG 206
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + V LL +M G++PN +Y I G+AK F E L KM +E C+PDV
Sbjct: 207 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 266
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T ++ ++G+I + + K + + +P T+ LLD +G G + + + M
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 326
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDL-----------------KQMEY------------- 224
+ Y+ +V Y VIDA + G + +Q Y
Sbjct: 327 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 386
Query: 225 -----LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF+ M KP+ T + YG +G+ K + + I+ D V N +
Sbjct: 387 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 446
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ + K V ++ G PD +TY M++ S + A K F D++E
Sbjct: 447 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E++ AM +G + N ++TA++ A + G +A + + MK P+ +Y+ LI
Sbjct: 321 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSLISG 379
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEMELTLVKMLSED 128
LKA F L M G +PN T+ I+ YG++ K EL M S+
Sbjct: 380 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL----MKSKG 435
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV N L SG++ ++ + + ++ G+ P T+ +++ KA F++
Sbjct: 436 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 495
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + + ++ N +ID +AG + +F ++ ++P+ T +L+
Sbjct: 496 KIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGL 555
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK +++ +L + +S+ + + +N ++D + + +L M +GC PD
Sbjct: 556 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDL 615
Query: 309 VTYRTMV 315
+Y T++
Sbjct: 616 SSYNTVI 622
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E L + M G N S+T + G++ FD+A+ +L M+N C+P
Sbjct: 205 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE-GCKP 263
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+++LI+ A + + M +P+ VTY TL+D +G +
Sbjct: 264 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 323
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M ++ +V + A G++ + +++ + GI P ++N L+ + KA
Sbjct: 324 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 383
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + ++M + T+ + I+ +G++G+ + + LM+S+ I P V
Sbjct: 384 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 443
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G+ V + + DT+ + ++ + F E + M +
Sbjct: 444 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
C PD + +++ G + A
Sbjct: 504 NNCVPDVLAVNSLIDTLYKAGRGDEA 529
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELF+ M G N + ++ YG+SG KA E MK + PDV + ++
Sbjct: 389 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK-SKGIVPDVVAGNAVL 447
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ + + ++ G+ P+T+TY +I +A F E M+ +C
Sbjct: 448 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 507
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV +N + +G+ D + + + + ++P+ T+N LL G+ G +++ +
Sbjct: 508 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 567
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+E M +Y ++TYN ++D + G
Sbjct: 568 LEEMYHSNYPPNLITYNTILDCLCKNG 594
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK LFQ MVD+G + + +S+T ++ ++G + + + +PD+ TY++
Sbjct: 912 EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-GLEPDLITYNL 970
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L ++M +GI PN TYN+LI G+A AE ++L++
Sbjct: 971 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
+P+V+T N +R + SG D+ Y + G P+ +T+
Sbjct: 1031 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ K+ ++A+ + M +EGC + + T L+ +G A + MK + D +
Sbjct: 239 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS-DQK 297
Query: 61 PDVNTYSIL---------------IKSCLKAFAF-DKVQA-------------------L 85
PD TY L I + +KA + D V A +
Sbjct: 298 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEM 357
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M +GI P +YN+LI + +A F + M +P+ +T + +G
Sbjct: 358 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 417
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+ + YE +S GI P + N +L K+G V ++ S +T
Sbjct: 418 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 477
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++I +A + +F M P + + SL+ AG+ ++ + +
Sbjct: 478 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ +N L+ GR E+ +LE M P+ +TY T++ NG N
Sbjct: 538 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 597
Query: 326 HA 327
A
Sbjct: 598 DA 599
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 3/311 (0%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E+F M + AN +F A+ G G A L MK + TY+ L+
Sbjct: 111 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA-GIVLNAYTYNGLVYF 169
Query: 73 CLKAFAFDK-VQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEP 131
+K+ FD+ + M G+ P+ TY+ L+ A+G+ + + L +M + +P
Sbjct: 170 LVKS-GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 228
Query: 132 DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVM 191
+V++ +R G + + D + K ++ G +P + T +L+ AG V
Sbjct: 229 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 288
Query: 192 EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHA 251
M+K VTY ++D FG GD + + ++ M+++ + V +++ A
Sbjct: 289 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 348
Query: 252 GKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTY 311
G+ + + + I+ + +N L+ + + F + + + M G KP+ T+
Sbjct: 349 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 408
Query: 312 RTMVRAYSTNG 322
+ Y +G
Sbjct: 409 VLFINYYGKSG 419
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 36/304 (11%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LIK K + L+ + G+ T YN+LI + E +M
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---------------------------- 160
C PD +T N L A G S +I+ M K E+
Sbjct: 786 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845
Query: 161 -------SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
S G P+ T+ LLD KAG E + M +Y YNI+++
Sbjct: 846 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ +++ +LF+ M + I P + ++ AG+ + R + + D
Sbjct: 906 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 965
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQD 332
+ +N L+D G+ K E + MQ++G P+ TY +++ G A K +++
Sbjct: 966 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1025
Query: 333 LVEK 336
L+ K
Sbjct: 1026 LLTK 1029
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 36/351 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +F + G +T ++T ++ ++ FD+A + M +C P
Sbjct: 450 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN-NCVP 508
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI + KA D+ + + + P TYNTL+ GR E+ L
Sbjct: 509 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 568
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P++ T N L +G ++ + G P ++++N ++ K
Sbjct: 569 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 628
Query: 182 GHFEKMSAVMEYMQK-----YHYSWTIV-----------TYNIVIDAFGRAGDLKQMEYL 225
+ + ++ M+K Y TI+ +I+ D F + G
Sbjct: 629 ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 688
Query: 226 FRLMR--------------SERIKPSCVT-----LCSLVRAYGHAGKPEKLGSVLRFIDN 266
LM +E I S +T LC L++ K + +++ +
Sbjct: 689 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 748
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ L T +N L+ +G+ M++ GC PD+ TY ++ A
Sbjct: 749 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA 799
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L G++ M + ++ Q ++ ++ TF + G G + M++
Sbjct: 94 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 153
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
TYN ++ ++G ++ ++R+M + + PS T L+ A+G E
Sbjct: 154 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 213
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ +LR ++ + + + + G+ K F E +L M+ GCKPD +T+ +++
Sbjct: 214 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 273
Query: 317 AYSTNGMKNHAKEFQDLVEKMDE 339
G + AK+ ++K D+
Sbjct: 274 VLCDAGRISDAKDVFWKMKKSDQ 296
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK K+ E+A LF M +G N ++ +L+ G++G +A + E + T +P
Sbjct: 975 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL-TKGWKP 1033
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL 104
+V TY+ LI+ + + D A M G PN+ TY L
Sbjct: 1034 NVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 150 DTMEKCYEKFQSAGIQPSIN----TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
D + E+F+SA +P + + N +L+ G M+ V + MQ+ + T
Sbjct: 68 DGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 127
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ + G G L+ +M+ I + T LV +G + V R +
Sbjct: 128 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 187
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ ++ L+ A+G+ + + +L M+ G KP+ +Y +R K
Sbjct: 188 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQ--AKR 245
Query: 326 HAKEFQDLVEKMDETCLAMKRPD 348
+ ++ L + +E C +PD
Sbjct: 246 FDEAYRILAKMENEGC----KPD 264
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 44/366 (12%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A M+ EG + +F LL RS FDKA+ + +K+ D ++ I
Sbjct: 106 DQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS--KVVLDAYSFGI 163
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-------AKMFAEM-ELT 120
+IK C +A F K LL+ + G+ PN V Y TLID + +F +M L
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLG 223
Query: 121 LV---------------------------KMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
LV M P+ + NC + + N G +D
Sbjct: 224 LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAF 283
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
K + + + GI + T+NIL+ + F + ++ + K S IVTYNI+I+ F
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSD---IM 270
+ LF ++S + P+ VT +L+ Y K E L L + + I
Sbjct: 344 CDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGY---SKVENLAGALDLVKEMEERCIA 400
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKE 329
V + L+DA+ RL + + +M++ G PD TY ++ +G MK +K
Sbjct: 401 PSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKL 460
Query: 330 FQDLVE 335
F+ L E
Sbjct: 461 FKSLGE 466
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 1/301 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A LF M G N +++ L++ + + GL + F + E+MK + P+ Y+ LI
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS-GIVPNAYAYNCLI 270
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
DK + ++M +GI +TYN LI R K F E + K+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + F + ++D+ + + + +S+G+ P++ T+N L+ Y K + +
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M++ + + VTY I+IDAF R ++ + LM + P T L+
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCV 450
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
G ++ + + + + ++V +N ++ Y + +L M Q G P+ +
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVAS 510
Query: 311 Y 311
+
Sbjct: 511 F 511
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 9/304 (2%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
++++ M G N ++ L+S Y G+ DKAF + M+ V TY+ILI
Sbjct: 249 QMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK-GIACGVMTYNILIGG 307
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
+ F + L+ ++ G+ PN VTYN LI+ + + ++ S P
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367
Query: 133 VWTMNCTLRAFGN----SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+ T N + + +G +D +++ E+ I PS T+ IL+D++ + H EK
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERC----IAPSKVTYTILIDAFARLNHTEKAC 423
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M+K + TY++++ G++K+ LF+ + ++P+ V +++ Y
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G + +L + S ++ + F + R + + E + +L M G KP
Sbjct: 484 CKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Query: 309 VTYR 312
Y+
Sbjct: 544 SLYK 547
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 60/389 (15%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN------------ 55
P KA LF +G + S + +L+ SG+ +A SL+ + +
Sbjct: 19 PTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLT 78
Query: 56 ----TPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTL------- 104
TP C Y ++ + + + + D+ L M +G P + T+N L
Sbjct: 79 QAHFTP-CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRS 137
Query: 105 ------------------IDAYGRAKM--------FAEMELTLVKMLSE-DCEPDVWTMN 137
+DAY M + L+ ML E P+V
Sbjct: 138 NYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYT 197
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
+ G + + + K G+ P+ +T+++L++ + K G + + E M++
Sbjct: 198 TLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS 257
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
YN +I + G + + +F MR + I +T L+ G + +K
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI---GGLCRGKKF 314
Query: 258 GSVLRFIDNSD---IMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
G ++ + + + + V +N L++ + ++ + ++ G P VTY T+
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTL 374
Query: 315 VRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ YS ++N A DLV++M+E C+A
Sbjct: 375 IAGYSK--VENLAGAL-DLVKEMEERCIA 400
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 9/339 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK+ + A L M AN F ++ + + + A L M+ T +
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME-TKGIR 290
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+V TY+ LI + LLS+M + I PN VT+N LIDA+ + E E
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ +PD T N + F ++D ++ ++ S P+I T+N L++ + K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
E + M + VTY +I F +AGD + +F+ M S R+ +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ GK + + +++ S++ L+ +N +++ + E ++
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE---AWDLFC 527
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
KPD VTY TM+ + K +E DL KM E
Sbjct: 528 SLSIKPDVVTYNTMISGLCS---KRLLQEADDLFRKMKE 563
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A +LF MV + F LLSA + F+ SL E M+ T D+ TYSI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSI 123
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I + A+L+ M G P+ VT ++L++ Y +K ++ + +M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PD +T + + ++ G QP + T+ +++ K G +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M+ +V +N +ID+ + ++ LF M ++ I+P+ VT SL+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ G+ +L + I + V FN L+DA+ + E + + E M QR PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 309 VTYRTMVRAYSTNGMKNHAKE-FQDLVEK 336
+TY ++ + + + AK+ F+ +V K
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 33/171 (19%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
KCK+ E ELF+ M G NT ++T ++ + ++G D A + + M + D+
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDI 468
Query: 64 NTYSILIKSC----------------------LKAFAFD----------KVQALLSDMST 91
TYSIL+ L F ++ KV +
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
I+P+ VTYNT+I ++ E + KM + P+ T N +RA
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ C K DK + + M+ G+ N Y I+ YGR + F + E ++L+
Sbjct: 160 VLLAYC-KDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT 218
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
P T ++++ +G++D +++ ++ S ++P +N+++ +YGK G
Sbjct: 219 GPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKV 278
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ +V + M++ + TIVT+N ++ K E +FR +++ ++ P + +L
Sbjct: 279 EQAMSVYQSMKRERVALTIVTFNSLLAC---QKTWKDAEDVFRKLQAAKLDPDVFSYTAL 335
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V AY A + E + + + I V +N L++AY + K + VL+ M+Q GC
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P +Y +++ AY + +L+ K ++T L MK D
Sbjct: 396 TPTVESYTSLISAYVS----------VNLMAKAEQTVLRMKEADL 430
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 9/326 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+L CK Q +K +FQ M + G AN + +T + YGR FDKA ++ + + T
Sbjct: 161 LLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT-G 219
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQ---ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
P TY ++KS +A D VQ L++D + ++P+ YN +I YG+
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ M E + T N L E + K Q+A + P + ++ L+
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTALV 336
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
++Y KA E A + M T V YN +I+A+ + D + + + M+
Sbjct: 337 NAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCT 396
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ + SL+ AY K + + +D+ + F L+ Y M
Sbjct: 397 PTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMMRS 456
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTN 321
E M+ G +P++ Y +V AY +N
Sbjct: 457 FETMKLAGLEPNRHVYTVLVNAYGSN 482
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ + D + S+TAL++AY ++ + A + + M +P Y+ LI
Sbjct: 313 AEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMI-AAGIRPTQVAYNALI 371
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + +A+L M G P +Y +LI AY + A+ E T+++M D +
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T + + N ++D M + +E + AG++P+ + + +L+++YG F+ SA+
Sbjct: 432 PNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFD--SAI 489
Query: 191 MEYMQ 195
+ Y Q
Sbjct: 490 IWYKQ 494
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
KCK PE A + + M GC +S+T+L+SAY L KA + MK D QP+
Sbjct: 375 AKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEA-DLQPN 433
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ T+ IL+ D + M G+ PN Y L++AYG F +
Sbjct: 434 LQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYK 493
Query: 123 KMLSEDCEPD 132
+ML C+PD
Sbjct: 494 QMLGTGCKPD 503
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 139/319 (43%), Gaps = 6/319 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A EL + + G N S+T L+ AY + G + KA +L + + + D+ +Y
Sbjct: 362 EEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGE-KSDLVSYGA 420
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
I + A D + M +G+ P+ YN L+ + M+L L +ML +
Sbjct: 421 FIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRN 480
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+PDV+ + F +G++D K ++ G+ P I +N ++ + K G
Sbjct: 481 VQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDAL 540
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ + M H++ TY+ VID + + D+ +F M + KP+ +T SL+ +
Sbjct: 541 SCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGF 600
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ V + + D++ + V + LV + + + E+M GC P+
Sbjct: 601 CKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPND 660
Query: 309 VTYRTMVRAYSTNGMKNHA 327
T+ Y NG+ N A
Sbjct: 661 ATFH-----YLINGLTNTA 674
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 137/318 (43%), Gaps = 3/318 (0%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E +L M G + N + F ++ A + GL +A +L M C
Sbjct: 284 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEM-GCG 342
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ TY+I+I K ++ LL +G+ PN +Y L+ AY + + +
Sbjct: 343 PDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGM 402
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L ++ + D+ + + +G+ID EK G+ P +NIL+ K
Sbjct: 403 LFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCK 462
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G M ++ M + + + +ID F R G+L + +F+++ + + P V
Sbjct: 463 KGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 522
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++++ + GK S L +++ D ++ ++D Y + + + M
Sbjct: 523 YNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 582
Query: 301 QRGCKPDKVTYRTMVRAY 318
+ KP+ +TY +++ +
Sbjct: 583 KHKFKPNVITYTSLINGF 600
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 136/321 (42%), Gaps = 4/321 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK E+ L + + C + + ++ Y + G A L +K P
Sbjct: 218 LGKI---EEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELK-MKGVLP 273
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY LI KA F+ V LL++M+ +G+ N +N +IDA + + E L
Sbjct: 274 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEML 333
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M C PD+ T N + G+I+ ++ EK + G+ P+ ++ L+ +Y K
Sbjct: 334 RRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKK 393
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + K S ++ + + +V+Y I AG++ + M + + P
Sbjct: 394 GDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIY 453
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
L+ G+ + +L + + ++ D F L+D + R E + +V+ +
Sbjct: 454 NILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIR 513
Query: 302 RGCKPDKVTYRTMVRAYSTNG 322
+G P V Y M++ + G
Sbjct: 514 KGVDPGIVGYNAMIKGFCKFG 534
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 10/290 (3%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C D +S L+K F +++ +L +M Q ++P ++ LI AY + +
Sbjct: 91 CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSL-DRA 149
Query: 119 LTLVKMLSE--DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF----QSAGIQPSINTFN 172
L L + E +C P N L SG++D + Y+K G T +
Sbjct: 150 LQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTS 209
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
I++ G E+ ++++ +V YN++ID + + GDL+ ++ +
Sbjct: 210 IMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMK 269
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+ P+ T +L+ + AG+ E + +L + + ++ FN ++DA + E
Sbjct: 270 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEA 329
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+L M + GC PD TY M+ +S G +E +L+EK E L
Sbjct: 330 AEMLRRMAEMGCGPDITTYNIMIN-FSCKG--GRIEEADELLEKAKERGL 376
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 4/299 (1%)
Query: 28 QSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLS 87
++F+AL+ AY SG D+A L ++ +C P ++L+ +K+ D L
Sbjct: 131 EAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYD 190
Query: 88 DM--STQGIRPNTVTYNTLIDAYGRAKM--FAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
M + G Y T I G + E + + C P V N + +
Sbjct: 191 KMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGY 250
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
G + + + + G+ P++ T+ L++ + KAG FE + ++ M + +
Sbjct: 251 CKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 310
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
+N VIDA + G + + + R M P T ++ G+ E+ +L
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK 370
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ + + L+ AY + + + G+L + + G K D V+Y + G
Sbjct: 371 AKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAG 429
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 128/318 (40%), Gaps = 21/318 (6%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A ++F+ ++ +G D + A++ + + G A S L M N+ PD TYS
Sbjct: 502 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEM-NSVHHAPDEYTYST 560
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +K + M +PN +TY +LI+ + + E M S D
Sbjct: 561 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD 620
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG--------- 179
P+V T + F +G+ + +E G P+ TF+ L++
Sbjct: 621 LVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLI 680
Query: 180 --KAGHFEKMSAVMEY---MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
K + S ++++ M + I YN VI + G + + L M ++
Sbjct: 681 EEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGF 740
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAE 291
V +L+ H GK ++ +++ N + V ++ +D Y GRL +E
Sbjct: 741 LIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRL---SE 797
Query: 292 MKGVLEVMQQRGCKPDKV 309
+L+ + + D+V
Sbjct: 798 ASVILQTLVEDSKFSDQV 815
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 158/329 (48%), Gaps = 4/329 (1%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L K ++A + F+ M + G + +T L+ + R+G+ +A + + M C
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ-GCX 565
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
DV TY+ ++ K + L ++M+ +G+ P+ T+ TLI+ Y + +
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTL 625
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+ + +PDV T N + F +++ + + + S I P+ ++ IL++ Y
Sbjct: 626 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 685
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + M + + TI+T N ++ + RAG+ + + M + I P +T
Sbjct: 686 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 745
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + ++ +++ ++NS ++ D + +N +++ + R E + ++ M
Sbjct: 746 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 805
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+RG PD+ TY +++ + T +N+ KE
Sbjct: 806 ERGVNPDRSTYTSLINGHVT---QNNLKE 831
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 8/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ E M ++G + ++ L++AY R GL ++AF L++ M +P
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 426
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ +I K + + + +L +M G+ P+T TYN L+ R + E
Sbjct: 427 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 486
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S+ PD+ + + + +G +D K + ++AG+ P + IL+ + +
Sbjct: 487 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 546
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V + M + +VTYN +++ + L + + LF M + P T
Sbjct: 547 GVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV--- 298
+L+ Y G K ++ + ++ D V +N L+D + + +EM+ V E+
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK---GSEMEKVNELWND 663
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
M R P+ ++Y ++ Y G + A + + ++VEK
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C +N F L+ Y ++ + +K+ C +N + L+ +K D
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLC-VSINACNSLLGGLVKVGWVDLA 342
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ ++ G++ N T N +I+A + + + L M + PDV T N + A
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G ++ + + G++P + T+N +++ K G + + V++ M K S
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
TYNI++ R ++ E +F M S+ + P V+ +L+ G ++ R
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N+ + D V + L+ + R +E V + M ++GC D VTY T++
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 323 MKNHAKE-FQDLVEK 336
M + A E F ++ E+
Sbjct: 583 MLSEADELFTEMTER 597
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L+ MV++G +A + ++ Y R+G KA L +M PD TY+ L
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML-LKGIVPDGITYNTL 749
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I +K D+ AL++ M G+ P+ +TYN +++ + R E EL ++KM+
Sbjct: 750 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 809
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
PD T + + + +++ G P
Sbjct: 810 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 122/318 (38%), Gaps = 59/318 (18%)
Query: 2 LGKCKQPEKAHELFQAMVDEGC---DANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
L KC++ + + F + C + QSF+A++ RS + PD
Sbjct: 208 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRS-------------RRLPD 254
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEM 117
Q +I ++ +V+ + S + T G N + ++ L+ Y +A+ E
Sbjct: 255 AQA-------VILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG 307
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ S+ + N L G +D + Y++ +G+Q ++ T NI++++
Sbjct: 308 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 367
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K E + + M++ +VTYN +I+A+ R G L++ L M + +KP
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 427
Query: 238 CVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLE 297
T +++ GK + KGVL+
Sbjct: 428 VFTYNAIINGLCKTGK-----------------------------------YLRAKGVLD 452
Query: 298 VMQQRGCKPDKVTYRTMV 315
M + G PD TY ++
Sbjct: 453 EMLKIGMSPDTATYNILL 470
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E M+ +G + ++ L++ + + D+AF+L+ M+N+ PDV TY+++
Sbjct: 726 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITYNVI 784
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ + + + ++ M +G+ P+ TY +LI+ + E +ML
Sbjct: 785 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Query: 130 EPD 132
PD
Sbjct: 845 VPD 847
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 140 LRAFGNSG--QIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
LR SG +++ +E + + G P + F++L+ +Y +A + ++
Sbjct: 260 LRMVRKSGVSRVEIVESLVLTYGNCGSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSK 317
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+I N ++ + G + +++ + ++ + TL ++ A K E
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
S L ++ + D V +N L++AY R E +++ M +G KP TY ++
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 318 YSTNGMKNHAKEFQDLVEKM 337
G AK D + K+
Sbjct: 438 LCKTGKYLRAKGVLDEMLKI 457
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 3/325 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNT 65
Q +KA+ LF AM+D G + ++++++SA ++ DKA + M KN PD
Sbjct: 222 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN--GVMPDCIM 279
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ L+ + + + M G+ P+ VTY L+D + E ++
Sbjct: 280 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 339
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD T L + G + M + G+Q + FN+++ +Y K +
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 399
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ V M++ + IV Y V+D AG + F ++SE + P+ V +L+
Sbjct: 400 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 459
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
K +K+ + + + I LDT+FFN ++ + E K + ++M + G +
Sbjct: 460 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE 519
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
P+ TY T++ Y +G + A +
Sbjct: 520 PNTNTYNTLIDGYCLDGKMDEAMKL 544
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 6/338 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQP 61
+ +P AH++F ++ G A+ LS R+ A SL M P
Sbjct: 39 RATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPA-VAISLFNRMPRAGATSAAP 97
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELT 120
++ TY I+I C + D A + + T G+R + + ++ L+ R + M++
Sbjct: 98 NIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIV 157
Query: 121 LVKMLSEDCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAGIQP-SINTFNILLDSY 178
L +M C+PD+++ L+ + ++ + G P + + +++
Sbjct: 158 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 217
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ G +K ++ + M S +VTY+ +I A + + + +F M + P C
Sbjct: 218 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ SLV Y +GKP++ + + + + D V + L+D + E + + +
Sbjct: 278 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ +RG KPD TY T++ Y+T G + DL+ K
Sbjct: 338 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 137/324 (42%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++A +F+ M G + + ++TAL+ ++G +A + + + +PD TY
Sbjct: 292 KPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTY 350
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+ A ++ LL M +G++ +N ++ AY + E L M
Sbjct: 351 GTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ 410
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ PD+ L +G++D + +S G+ P+I F L+ ++K
Sbjct: 411 QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDK 470
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M + +N ++ + G + + + LF LM I+P+ T +L+
Sbjct: 471 VEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID 530
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y GK ++ +L + + + V +N +++ Y + + +L M +G P
Sbjct: 531 GYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNP 590
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
VTY +++ G AKE
Sbjct: 591 GIVTYEMLLQGLFQAGRTVAAKEL 614
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 3/278 (1%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR-P-NTVTYNTLIDAYGRAKMFAE 116
C+PD+ +Y+IL+K + LL M+ R P + V Y T+I+ R +
Sbjct: 166 CKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK 225
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
ML PDV T + + A + +D + + + G+ P + L+
Sbjct: 226 AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 285
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 236
Y +G ++ + + M ++ +VTY ++D + G + +F + KP
Sbjct: 286 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345
Query: 237 SCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVL 296
T +L+ Y G ++ +L + + L FN ++ AY + E V
Sbjct: 346 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 405
Query: 297 EVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
M+Q+G PD V Y T++ T G + A +F L
Sbjct: 406 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 443
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 136/320 (42%), Gaps = 1/320 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A LF M + GC+ N ++T L+ + G D+A +L M P V ++ L
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEK-GVAPSVVPFNAL 366
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I S K + +L M ++ + PN TYN LI + R K L KM+
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV T N + G +D+ + + G P TFN + + G +
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
++E +++ H Y +ID + +AG ++ LF+ M +E P+ +T ++
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
GK + ++ + D+ +N LV+ + F +L + G +P+ V
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606
Query: 310 TYRTMVRAYSTNGMKNHAKE 329
TY ++AY + G A+E
Sbjct: 607 TYTAFIKAYCSQGRLEEAEE 626
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 4/304 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
N +++ L+ + R D+A +LL M + PDV TY+ LI + D L
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVES-KLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
M G P+ T+N + R E L + + + + + +
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+G+I+ +++ + P+ TFN+++D K G + ++E M K+ T+ T
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YNI+++ + D + + + S +P+ VT + ++AY G+ E+ ++ I
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK 632
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
N ++LD+ +N L++AYG + GVL M GC+P +TY +++ ++
Sbjct: 633 NEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV---IEK 689
Query: 326 HAKE 329
H KE
Sbjct: 690 HKKE 693
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 46/372 (12%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E A LF+ M+ E C N+ +F ++ + G A L+E M D +
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF-DVK 567
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P ++TY+IL++ LK + FD+ +L+ + + G +PN VTY I AY E E
Sbjct: 568 PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEM 627
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL-----L 175
++K+ +E D + N + A+G G +D+ + G +PS T++IL +
Sbjct: 628 VIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVI 687
Query: 176 DSYGKAGH------------------------FEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ + K G F + + E M + + TY+ +I+
Sbjct: 688 EKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLIN 747
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
+ G L L+ MR I PS + SL+ + G G + +D+ M+
Sbjct: 748 GLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGM---FGEAVTLLDS---MM 801
Query: 272 DTVFFNCLVDAYGRLKC--FAEM-----KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ L ++Y L C F +M + V + + G D+V ++ ++ + G
Sbjct: 802 ECSHLAHL-ESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYV 860
Query: 325 NHAKEFQDLVEK 336
+ E +L+EK
Sbjct: 861 DQCSELLNLMEK 872
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 16/342 (4%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ E+A +F M N S+T L+ +G +A M+
Sbjct: 231 VLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMRED-G 285
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P V TY++L+ + ++ + +L +M +G PN TY LID + E
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M+ + P V N + ++ G ++ +S + P++ T+N L+ +
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++ A++ M + S +VTYN +I G + LFRLM + P
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
T + + G+ + +L + + + + L+D Y + + +
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD---LVEKM 337
M C P+ +T+ M+ +G++ K QD LVE M
Sbjct: 526 MLAEECLPNSITFNVMI-----DGLRKEGK-VQDAMLLVEDM 561
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 13/322 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A LF+ M+ +G + +F A + R G +A +LE +K + + + Y+
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK-HVKANEHAYTA 505
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI KA + +L M + PN++T+N +ID + + L + M D
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
+P + T N + D + + S+G QP++ T+ + +Y G E+
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ ++ YN++I+A+G G L + R M +PS +T S++ +
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY-SILMKH 684
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVD---AYGRLKCFAEMKGVLEVMQQRGCK 305
K +K GS + + LD N VD + ++ F + E M + GC
Sbjct: 685 LVIEKHKKEGS-------NPVGLDVSLTNISVDNTDIWSKID-FGITTVLFEKMAECGCV 736
Query: 306 PDKVTYRTMVRAYSTNGMKNHA 327
P+ TY ++ G N A
Sbjct: 737 PNLNTYSKLINGLCKVGRLNVA 758
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 46/310 (14%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A E+ + +EG ++ + L++AYG GL D AF +L M T C+P TYSI
Sbjct: 622 EEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT-GCEPSYLTYSI 680
Query: 69 LIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
L+K ++ + + D+S I + + ID +G + E KM
Sbjct: 681 LMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID-FGITTVLFE------KMAEC 733
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
C P++ T + + G+++ Y + GI PS N LL S K G F +
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR- 246
+++ M + + + +Y ++I LF M E+ + CSL+R
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICG------------LFEQMNKEKAE---AVFCSLLRC 838
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y + D V + L+D + + +L +M++ GC+
Sbjct: 839 GYNY---------------------DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRL 877
Query: 307 DKVTYRTMVR 316
TY +++
Sbjct: 878 HPETYSMLMQ 887
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 123/293 (41%), Gaps = 35/293 (11%)
Query: 73 CLKAFAF-DKVQALLSDMST---QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
CL F+ D++ +L +M T + PN +T NT++++Y + A L V++L +
Sbjct: 160 CLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCE 219
Query: 129 CEPDVWTMNCTL----------RAFG---------------------NSGQIDTMEKCYE 157
PD++T + RA G +G++ + +
Sbjct: 220 PGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWA 279
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ + G P++ T+ +L+ + ++G + ++ M++ + TY ++ID + G
Sbjct: 280 RMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
+ + + M + + PS V +L+ +Y G E VL +++ + + +N
Sbjct: 340 RMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYN 399
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
L+ + R K +L M + PD VTY T++ G+ + A
Sbjct: 400 ELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C P++NTYS LI K + +L M GI P+ + +N+L+ + + MF E
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI--DTMEKCYEKFQSAGIQPSINTFNILLD 176
L M+ +C + L G Q+ + E + G + +L+D
Sbjct: 795 TLLDSMM--ECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLID 852
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
K G+ ++ S ++ M+K TY++++ RA
Sbjct: 853 GLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 1/168 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
LF+ M + GC N +++ L++ + G + AFSL HM+ P ++ L+ SC
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREG-GISPSEIIHNSLLSSC 784
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K F + LL M + +Y LI + E +L D
Sbjct: 785 CKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDE 844
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ +G +D + + G + T+++L+ +A
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 8/344 (2%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K +A +LF MV +G + +++AL+S + G A L M + +PDV
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI-LENIKPDV 295
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
T++IL+ + K + + + M QGI+PN VTYN+L+D Y K + +
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M PD+ + + + F + D +++ I P + T++ L+D K+G
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+++ M I TYN ++DA + + + L + + +P T
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
L++ +GK E V + LD + ++ + F E +L M+ G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRP 347
C PD TY ++ + K+ D+ EK+ +A P
Sbjct: 536 CIPDAKTYEIIILSL-------FKKDENDMAEKLLREMIARGLP 572
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 3/308 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTP-DCQPDVNTYSIL 69
A +F ++ G +T +FT L G +AF L H K D +Y L
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF--LFHDKVVALGFHFDQISYGTL 196
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K LL + ++PN V YNT+ID+ + K+ E +M+S+
Sbjct: 197 IHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGI 256
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV T + + F G++ + K I+P + TFNIL++++ K G ++
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V + M K VTYN ++D + ++ + + +F M + P + ++ +
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
K ++ ++ + + +I+ D V ++ L+D + + +++ M RG P+
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436
Query: 310 TYRTMVRA 317
TY +++ A
Sbjct: 437 TYNSILDA 444
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 17/339 (5%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K K L Q M G N + L++ + + GL AFS+ + P
Sbjct: 95 LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM-GYVP 153
Query: 62 DVNTYSILIKS-CLK-----AFAF-DKVQALLSDMSTQGIRPNTVTYNTLIDAYGR-AKM 113
D T++ L K CLK AF F DKV AL G + ++Y TLI + +
Sbjct: 154 DTITFTTLSKGLCLKGQIQQAFLFHDKVVAL-------GFHFDQISYGTLIHGLCKVGET 206
Query: 114 FAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNI 173
A ++L L ++ +P+V N + + ++ + + S GI P + T++
Sbjct: 207 RAALDL-LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSA 265
Query: 174 LLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSER 233
L+ + G + + M + + T+NI+++AF + G +K+ + +F +M +
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 234 IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMK 293
IKP+ VT SL+ Y + K S+ + + D ++ +++ + ++K F E
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 294 GVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
+ + M ++ PD VTY +++ S +G ++A + D
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 5/306 (1%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
N S+++ + + + D A SL + +NT P ++ ++ S +K+ + V
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNT---TPPAFEFNKILGSLVKSKHYHTVL 105
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
L M +GI+PN V N LI+ + + + K+L PD T +
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGL 165
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
GQI ++K + G ++ L+ K G +++ + +
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRF 263
V YN +ID+ + + + LF M S+ I P VT +L+ + GK + +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 264 IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGM 323
+ +I D FN LV+A+ + E K V ++M ++G KP+ VTY +++ Y
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 324 KNHAKE 329
N AK
Sbjct: 346 VNKAKS 351
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +L M D G N ++ ++L A ++ DKA +LL K+ QP
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK-GFQP 468
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D++TYSILIK ++ + + + D+ +G + Y +I + +F E L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
KM C PD T + + + D EK + + G+ +N +++ L +
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL--PLNFYDLYLTRLAQT 586
Query: 182 GH 183
H
Sbjct: 587 WH 588
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 143/322 (44%), Gaps = 3/322 (0%)
Query: 3 GKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK AH +L M G N + +LL AY R D+ +L+ M+N +
Sbjct: 152 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENE-GIE 210
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+IL+ A KV+A+ +M ++ + + Y+++I+AY RA
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + EP+ T + F GQ++ E Q G+ + FN ++D Y +
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+K + M+K + TYN + RA + + + L R+M + ++P+ V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + + G + + R + + V +N ++D Y + E + + M+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
++G PD +Y +V + NG
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNG 472
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 5/310 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--YSILIKSCLKAFAFDKVQALL 86
S + ++ Y +SG A LL+ M P VN Y+ L+ + + D+V +L
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEM---PRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +GI P TY L+D A+ ++E +M S++ DV+ + + A+ +
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + +++ GI+P+ +T+ L++ + K G E ++ MQ + +
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +ID + R + + + +M I+ T +L A + ++ ++LR +
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + V + L+ + E + + M G +P VTY M+ Y G
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 327 AKEFQDLVEK 336
A+ F+ +EK
Sbjct: 442 AERFKKEMEK 451
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K +F+ M + + ++++++AY R+G +A + + +P
Sbjct: 223 LSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGN-GIEP 281
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF---AEME 118
+ +TY LI K + + L++DM +G+ N + +NT+ID Y R M E++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + KM E DV+T N + ++D + G++P+ ++ L+ +
Sbjct: 342 MIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G + + M ++VTYN+++D + + G +++ E + M + + P
Sbjct: 399 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDI 458
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ +LV +GH N VD L+ F EMK
Sbjct: 459 YSYAALV--HGHC------------------------VNGKVDV--ALRLFEEMK----- 485
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
QRG KP+ V Y ++ + G A + D
Sbjct: 486 --QRGSKPNLVAYTALISGLAKEGRSEEAFQLYD 517
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 1/242 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A L M G N F ++ Y R + DKA + M+ + DV
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM-GIELDV 353
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ L +A D+ + LL M +G+RPN V+Y TLI + E +
Sbjct: 354 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M EP + T N + + G I E+ ++ + G+ P I ++ L+ + G
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGK 473
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + E M++ +V Y +I + G ++ L+ M + + P +
Sbjct: 474 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 533
Query: 244 LV 245
LV
Sbjct: 534 LV 535
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFG--NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L+K + C V ++ ++ G SG++ + ++ G++ + +N LLD+Y
Sbjct: 129 LLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAY 188
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++++ +++ M+ T+ TY I++D A D+ ++E +F M+S+ +
Sbjct: 189 TREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDV 248
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
S++ AY AG + V + I + + L++ + ++ + ++
Sbjct: 249 YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTD 308
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MQ RG +++ + TM+ Y M + A E + ++EKM
Sbjct: 309 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM 347
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 7/331 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A ++F +M GC + QSF +L +S + A++L + K + D +Y
Sbjct: 151 KPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKG--KFRADCVSY 208
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++++ +K +L +M +G+ PN +YNT++ Y RA E ++M
Sbjct: 209 NVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKK 268
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
DCE DV T + FG +G+I K ++ G+ PS+ T+N + K + +
Sbjct: 269 RDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDN 328
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVTLCSLV 245
+ E M Y +TYN+VI G++++ ME++ R M+ + +P+ T ++
Sbjct: 329 AIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGR-MKDDGCEPNVQTYNLVI 387
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA-YGRLKC--FAEMKGVLEVMQQR 302
R + G+ +K + + + + D + + +N L+ A + R K +L M R
Sbjct: 388 RYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDR 447
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
G P K T+ ++ G + AKE L
Sbjct: 448 GFVPRKFTFNRVLNGLLLTGNQGFAKEILRL 478
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 131/339 (38%), Gaps = 54/339 (15%)
Query: 8 PEKAHELFQAMVDEGCDANTQSFTALLSAYG----RSGLFDKAFSLLEHMKNTPDCQ--- 60
P+ + + + + ++G A F LLS + +D A + ++++P +
Sbjct: 67 PQLVNTILKRLWNDGPKA--LQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLV 124
Query: 61 ---------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA 111
P T++I+ + A + + M G + ++NT++D ++
Sbjct: 125 YRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKS 184
Query: 112 KMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTF 171
K EM L K+ D + N + + + + + ++ G+ P++ ++
Sbjct: 185 KR-VEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSY 243
Query: 172 NILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRS 231
N +L Y +AG + M+K ++TY VI FG AG++K+ +F M
Sbjct: 244 NTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVK 303
Query: 232 ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAE 291
+ + PS T + ++ VL DN D N +V
Sbjct: 304 KGVLPSVATYNAFIQ-------------VLCKKDNVD--------NAIV----------- 331
Query: 292 MKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
+ E M +G P+ +TY ++R G A EF
Sbjct: 332 ---IFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEF 367
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 158 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+ +SA + P+ TF I+ + Y AG + V M ++ + ++N ++D ++
Sbjct: 126 RMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSK 185
Query: 218 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 277
++ LF++ + + + CV+ +V + + K +L+ + + + +N
Sbjct: 186 RVEMAYNLFKVFKG-KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYN 244
Query: 278 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEK 336
++ Y R E M++R C+ D +TY T++ + G +K K F +V+K
Sbjct: 245 TMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK 304
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 17/321 (5%)
Query: 33 LLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
LL A GR+ A +L E PD +++++IK + F K L+ M+
Sbjct: 191 LLIARGRA---QDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEF 247
Query: 93 GIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED--CEPDVWTMNCTLRAFGNSGQID 150
G P+T+T+N L+D RAK L++ L D C P+V T + + +G+++
Sbjct: 248 GCSPDTITHNILVDGLCRAKQVNRGH-DLLRRLQRDGVCMPNVVTYTSVISGYCKAGRME 306
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY--HYSWTIVTYNI 208
Y +G +P+ T+N+L++ YGKA E SAV Y Q +VT++
Sbjct: 307 DALSVYNDMLESGTRPNTVTYNVLINGYGKALDME--SAVRMYRQLILRRCPPDVVTFSS 364
Query: 209 VIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-PEKLGSVLRFIDNS 267
+ID + R G L +++ M I+P+ T ++ + + E LG + +
Sbjct: 365 LIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRA 424
Query: 268 DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
DI T +N ++D + E ++ M+++GC PDK TY ++ + MK
Sbjct: 425 DIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHC---MKGRI 481
Query: 328 KEFQDLVEKMDETCLAMKRPD 348
E L KM ET RPD
Sbjct: 482 PEAITLFHKMVETGC---RPD 499
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 36/323 (11%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+KA EL + M + GC +T + L+ R+ ++ LL ++ C P+V TY+
Sbjct: 235 QKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTS 294
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I KA + ++ +DM G RPNTVTYN LI+ YG+A +++
Sbjct: 295 VISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRR 354
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH-FEKM 187
C PDV T + + + GQ+D + +++ IQP++ TF+I++ S K E +
Sbjct: 355 CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEAL 414
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ E + + YN VID + G +++ + M + P T L+
Sbjct: 415 GFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILI-- 472
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GH K GR+ E + M + GC+PD
Sbjct: 473 IGHCMK------------------------------GRIP---EAITLFHKMVETGCRPD 499
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF 330
K+T + + GM N +
Sbjct: 500 KITVNSFISCVLKAGMPNEVDQI 522
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK E A +++ ++ C + +F++L+ Y R G D A + + M QP+
Sbjct: 335 GKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQH-HIQPN 393
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQG-IRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V T+SI+I S K + L +++ + I P T YN +ID + E L +
Sbjct: 394 VYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIV 453
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C PD +T + G+I + K G +P T N + KA
Sbjct: 454 TDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKA 513
Query: 182 GHFEKMSAVM 191
G ++ +M
Sbjct: 514 GMPNEVDQIM 523
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 37/344 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSL---LEHMKNTPDCQ------ 60
+A + F M+D G N +T L++ + ++G +A S+ L + PD Q
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620
Query: 61 -------------------------PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR 95
PDV TYS LI K +K L +M +GI
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 680
Query: 96 PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKC 155
PN YN L+D ++ M + EPD T + + + S +
Sbjct: 681 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740
Query: 156 YEKFQSAGIQPSINTFNILLDSYGKAGHFEK-MSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ + S G+QP +N L+ K G EK M+ E +QK T +++N +ID +
Sbjct: 741 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF--ATTLSFNTLIDGYC 798
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
++ +++ LF+ M +++I P VT +++ + AGK E+ + + + ++++DTV
Sbjct: 799 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 858
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ L+ Y +L +E+ + E M +G KPD+VTY ++ A+
Sbjct: 859 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 36/352 (10%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN---TP 57
G CK + EKA E+ + MV GC N+++F L+ Y R +A LL+ M+ P
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436
Query: 58 DC-------------------------------QPDVNTYSILIKSCLKAFAFDKVQALL 86
+P+V YSILI + ++ + LL
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
MS G+ P+ YN +I +A E L+++ +PD T + + +
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G++ K +++ G+ P+ + +L++ + KAG+ + ++ + + T
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+ I + G +++ +F ++ + + P T SL+ + G+ EK + +
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
I + +N LVD + + + + M ++G +PD VTY TM+ Y
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 150/370 (40%), Gaps = 37/370 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L KC E +++ M+D + ++T L+ A ++G A +L M + P
Sbjct: 203 LLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEM-DEKGLNP 261
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+ YS++I+ + D+ L M +G+ PNT TY + RAK E +LT
Sbjct: 262 NEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTF 321
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M +PD + + F G ID + + + S GI ++ T+N+L+ K
Sbjct: 322 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 381
Query: 182 GHFEKMSAV-----------------------------------MEYMQKYHYSWTIVTY 206
G EK + + ++ M+K + + V+Y
Sbjct: 382 GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 441
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
+I+ DL L M +KP+ V L+ AY G+ E+ +L +
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC 501
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG-MKN 325
S + D +N ++ + E L +Q RG KPD VT+ + YS G M
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561
Query: 326 HAKEFQDLVE 335
AK F ++++
Sbjct: 562 AAKYFDEMLD 571
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 139/338 (41%), Gaps = 6/338 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K+ +A F+ M G + + +AL+ + R G D+ + + M + C
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS---CGI 364
Query: 62 DVN--TYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+N TY++LI K +K +L M T G +PN+ T+ LI+ Y R
Sbjct: 365 PINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALE 424
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L +M + P + + + + K EK +G++P++ ++IL+ +Y
Sbjct: 425 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYA 484
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
G E+ +++ M + I YN +I +AG +++ ++ +KP V
Sbjct: 485 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 544
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T + + Y GK + + + +M + + L++ + + E + +
Sbjct: 545 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL 604
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
G PD T + NG A K F +L EK
Sbjct: 605 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 155/361 (42%), Gaps = 37/361 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A ++F + ++G + ++++L+S + + G +KAF L + M P
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM-CLKGIAP 681
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
++ Y+ L+ K+ + + L M +G+ P++VTY+T+ID Y +++ AE
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M S+ +P + N + G ++ + + G ++ +FN L+D Y K+
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKS 800
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
++ S + + M VTY VID +AG +++ LF+ M+ + VT
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFF------------------------- 276
SL+ Y G+ ++ ++ + + D V +
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 277 ----------NCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ L+ A + + E +L+ M + G KP T+VR++ G +
Sbjct: 921 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980
Query: 327 A 327
A
Sbjct: 981 A 981
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 144/343 (41%), Gaps = 2/343 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L CK A++L + M G N ++ L+ AY G ++A LL+ M + P
Sbjct: 448 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM-SCSGVAP 506
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D+ Y+ +I KA ++ L ++ +G++P+ VT+ I Y + E
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 566
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+ML P+ + +G + + + + G+ P + T + + K
Sbjct: 567 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKN 626
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G ++ V +++ + TY+ +I F + G++++ L M + I P+
Sbjct: 627 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+LV +G ++ + + + D+V ++ ++D Y + + AE + M
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746
Query: 302 RGCKPDKVTYRTMVRAYSTNG-MKNHAKEFQDLVEKMDETCLA 343
+G +P Y +V G M+ F+++++K T L+
Sbjct: 747 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS 789
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 39/317 (12%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A +LF M ++G + ++ +++ ++ Y +S +AFSL M + Q
Sbjct: 692 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP-SKGVQ 750
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P Y+ L+ C K +K L +M +G T+++NTLID Y ++ E
Sbjct: 751 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQL 809
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+++ PD T + +G+++ +++ Q + T+ L+ Y K
Sbjct: 810 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 869
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVI------------------------------ 210
G ++ A+ E M VTY +VI
Sbjct: 870 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929
Query: 211 -----DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
A + DL + L M +KPS +LVR++ AGK ++ V +
Sbjct: 930 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989
Query: 266 NSDIMLDTVFFNCLVDA 282
+ ++ DT LV+
Sbjct: 990 SLGLVPDTTTLIDLVNG 1006
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 122/305 (40%), Gaps = 11/305 (3%)
Query: 35 SAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGI 94
+ Y S + D S+L +N P V + ILI S + D+ + I
Sbjct: 135 TPYSSSSILD---SVLFWFRNYGGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKNDSI 189
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
+ + N+L+ + M ML DV+T + A +G + ++
Sbjct: 190 LISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKR 249
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
+ G+ P+ ++++++ + G ++ + M + TY I+
Sbjct: 250 VLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLC 309
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
RA + + + F M+ +KP +L+ + G +++ + + + I ++ +
Sbjct: 310 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 369
Query: 275 FFNCLVDA---YGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
+N L+ +G+++ AE +L+ M GCKP+ T+ ++ Y A E
Sbjct: 370 TYNVLIHGLCKFGKMEKAAE---ILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 332 DLVEK 336
D +EK
Sbjct: 427 DEMEK 431
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 9/322 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CKQ + + + M G N S+++LL R+G + AF L + +K+ +
Sbjct: 327 GLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ-GFK 385
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D YSI++ C + + L +DM P+ Y++LI AY R + E
Sbjct: 386 HDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEV 445
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
M+S+ P+V T + F N G I +K + G+ PS+ T+ +++ K
Sbjct: 446 FELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCK 505
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
M + M K Y V Y+I+ID F +A DL++ L+ M E KP+ T
Sbjct: 506 VNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFT 565
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV-- 298
SL+ H K ++ ++ + + + D + + L+ Y + + MK LE+
Sbjct: 566 YTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKR---SNMKAALEIFR 622
Query: 299 -MQQRGCKPDKVTYRTMVRAYS 319
M+ G D Y ++ +S
Sbjct: 623 EMETEGLSADSFVYTCLIGGFS 644
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
+Q ++A E+F+ MV +G N + T L+ + GL +AF L+ ++ P + T
Sbjct: 437 RQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQF-GVVPSLCT 495
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y ++I K + + + +DM +G P+TV Y+ +ID + +A E KM+
Sbjct: 496 YRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMV 555
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
E +P+++T + + ++ + ++ G+ P + L+ Y K + +
Sbjct: 556 DEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMK 615
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ M+ S Y +I F + + + M ++ + P+ VT L+
Sbjct: 616 AALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLI 675
Query: 246 RAYGHAGKPEK 256
Y G +K
Sbjct: 676 VGYFKIGDEKK 686
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 37/307 (12%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY--GRAKMFAEMELTLVKM 124
+ L+K ++ ++L DM + G PN +Y+ L+ Y G E L +M
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239
Query: 125 LSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHF 184
E P+ T L ++ Q+ + + G + FN ++ + G
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQV 299
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
K V + M+K + + +Y+I++D + GD+ Y+ M I P+ V+ SL
Sbjct: 300 HKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359
Query: 245 VRAYGHAGKPEKLGSVLRFIDNS--------------------------DIMLDTVFFNC 278
+ AG+ E + + + + D+ D V N
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 279 LVDAYG---------RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
+ DAY R + E V E+M G P+ VT +V +S G+ A
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 330 FQDLVEK 336
F D V +
Sbjct: 480 FLDKVRQ 486
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 132/330 (40%), Gaps = 41/330 (12%)
Query: 46 AFSLLEHMKNTPDCQPDVNTYSILIKSCLKA--FAFDKVQALLSDMSTQGIRPNTVTYNT 103
A SL + MK++ P+V +YS+L+ ++ LLS+M +G+RPN TY T
Sbjct: 195 ARSLFDDMKSSGP-SPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYAT 253
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEP-DVWTMNCTLRAFGNSGQIDTMEKCYEKFQSA 162
+ AK + ++ML + P + + N + F + GQ+ + ++ +
Sbjct: 254 YLYGLCHAKQ-VKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKC 312
Query: 163 GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM 222
G P +++++IL+D K G ++ M + + +V+Y+ ++ RAG ++
Sbjct: 313 GFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELA 372
Query: 223 EYLFRLMRSERIK-----------------------------------PSCVTLCSLVRA 247
LF+ ++ + K P SL+ A
Sbjct: 373 FELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYA 432
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
Y + ++ V + + I + V LV + E L+ ++Q G P
Sbjct: 433 YCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPS 492
Query: 308 KVTYRTMVRAY-STNGMKNHAKEFQDLVEK 336
TYR ++ N + F D++++
Sbjct: 493 LCTYRVIIHGLCKVNKPNDMWGIFADMIKR 522
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 3 GKCKQPEKAH--ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK AH +L M G N + +LL AY R D+ +L+ M+N +
Sbjct: 152 GYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENE-GIE 210
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V TY+IL+ A KV+A+ +M ++ + + Y+++I+AY RA
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ + EP+ T + F GQ++ E Q G+ + FN ++D Y +
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+K + M+K + TYN + RA + + + L R+M + ++P+ V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+L+ + + G + + R + + V +N ++D Y + E + M+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450
Query: 301 QRGCKPDKVTYRTMVRAYSTNG 322
++G PD +Y +V + NG
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNG 472
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 136/310 (43%), Gaps = 5/310 (1%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT--YSILIKSCLKAFAFDKVQALL 86
S + ++ Y +SG A LL+ M P VN Y+ L+ + + D+V +L
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEM---PRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201
Query: 87 SDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
M +GI P TY L+D A+ ++E +M S++ DV+ + + A+ +
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
G + + +++ GI+P+ +T+ L++ + K G E ++ MQ + +
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +ID + R + + + +M I+ T +L A + ++ ++LR +
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ + V + L+ + E + + M G +P VTY M+ Y G
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 327 AKEFQDLVEK 336
A+ F++ +EK
Sbjct: 442 AERFKNEMEK 451
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 42/334 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + K +F+ M + + ++++++AY R+G +A + + +P
Sbjct: 223 LSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGN-GIEP 281
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF---AEME 118
+ +TY LI K + + L++DM +G+ N + +NT+ID Y R M E++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ + KM E DV+T N + ++D + G++P+ ++ L+ +
Sbjct: 342 MIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
G + + M ++VTYN+++D + + G +++ E M + + P
Sbjct: 399 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI 458
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+ +LV +GH N VD L+ F EMK
Sbjct: 459 YSYAALV--HGHC------------------------VNGKVDV--ALRLFEEMK----- 485
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
QRG KP+ V Y ++ + G A + D
Sbjct: 486 --QRGSKPNLVAYTALISGLAKEGRSEEAFQLYD 517
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 1/242 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A L M G N F ++ Y R + DKA + M+ + DV
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM-GIELDV 353
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ L +A D+ + LL M +G+RPN V+Y TLI + E +
Sbjct: 354 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M EP + T N + + G I E+ + + G+ P I ++ L+ + G
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 473
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + E M++ +V Y +I + G ++ L+ M + + P +
Sbjct: 474 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 533
Query: 244 LV 245
LV
Sbjct: 534 LV 535
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFG--NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L+K + C V ++ ++ G SG++ + ++ G++ + +N LLD+Y
Sbjct: 129 LLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAY 188
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
+ ++++ +++ M+ T+ TY I++D A D+ ++E +F M+S+ +
Sbjct: 189 TREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDV 248
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
S++ AY AG + V + I + + L++ + ++ + ++
Sbjct: 249 YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTD 308
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MQ RG +++ + TM+ Y M + A E + ++EKM
Sbjct: 309 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKM 347
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
GK K+ A LF MV G + N S+ +++ ++G A + M+ +P+
Sbjct: 180 GKIKE---AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPN 235
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
V TY+ +I S K ++ LS+M +GI P+ VTYNT++ + E
Sbjct: 236 VVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
+M+ + PD T N + G + E G +P+ T+N L+D Y
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
++ V+ M + + +YNI+I+ + ++ + + + L M + + P VT
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+L++ G+P + ++ + + +S ++ D + ++ L+D + + E +L+ M +R
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
KP+ + Y ++R G AKE
Sbjct: 476 RIKPNIILYTILIRGMFIAGKLEVAKEL 503
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 1/277 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
Q +A LF+ MV +T +F L+ + G+ +A + E M +P+ TY
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEK-GAEPNAYTY 344
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+ L+ D+ +L M +G PN +YN LI+ Y ++K E + L +M
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
++ PD T + ++ G+ +++ S+G+ P + ++ILLD + K GH ++
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 464
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+++ M + I+ Y I+I AG L+ + LF + ++ I+P T +++
Sbjct: 465 ALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIK 524
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
G ++ R +++ + D+ +N ++ +
Sbjct: 525 GLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+P V + + S K + +L + M G+ N + N LI+ R
Sbjct: 93 RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ KM +PD T N + N G+I + + +G +P++ ++N +++
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G+ V M++ +VTYN +ID+ + + + M I P V
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +++ + G+ + + + + ++M DTV FN LVD + +E + V E M
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332
Query: 300 QQRGCKPDKVTYRTMVRAY 318
++G +P+ TY ++ Y
Sbjct: 333 TEKGAEPNAYTYNALMDGY 351
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 3/252 (1%)
Query: 1 MLGKC--KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G C Q ++A ++ M+ +GC N S+ L++ Y +S ++A LL M + +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM-SEKN 406
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD TYS L++ + + L +M + G+ P+ + Y+ L+D + + E
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +M +P++ +R +G+++ ++ + K + GI+P I T+N+++
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G ++ M+ + +YN++I F + D L M +R
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADS 586
Query: 239 VTLCSLVRAYGH 250
T L+ H
Sbjct: 587 STFQMLLDLESH 598
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 36/243 (14%)
Query: 95 RPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
RP+ V + + + + K ++ +M +V+++N + +D
Sbjct: 93 RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
K GIQP TFN L++ G ++ + M + +++YN VI+
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ G+ +FR M R KP+ VT
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVT---------------------------------- 238
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDL 333
+N ++D+ + + E L M RG PD VTY T++ + + G N A + F+++
Sbjct: 239 -YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 334 VEK 336
V +
Sbjct: 298 VGR 300
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +A +L M G D + ++F L+ AYGR+G +K F++L M++ +
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK-GIK 472
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V ++ ++K+ K + A+L DM + + PN YN++IDAY + + L
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ KM S ++T N L+ + QID E+ + G++P + ++N ++ +
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
G ++ +++ M KY T+ TY+ ++ A G AG + ME L++ M + ++PS
Sbjct: 593 KGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPS 649
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 148/313 (47%), Gaps = 3/313 (0%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + KA ++ + +V G T + L++ Y + AFS+ E MK+ +
Sbjct: 344 GLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR-HIR 402
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ LI K + + L+ +M G+ P+ T+NTLIDAYGRA +
Sbjct: 403 PDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTV 462
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L M + + +V + ++AF +G+I + + P+ +N ++D+Y +
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+G E+ ++E M+ S +I TYN+++ + + + E L + ++ ++P V+
Sbjct: 523 SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVS 582
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A + G ++ +L+ + DI ++ L+ A G +M+ + + M
Sbjct: 583 YNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMV 642
Query: 301 QRGCKPDKVTYRT 313
+ +P Y T
Sbjct: 643 HKNVEPSSSIYGT 655
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 150/365 (41%), Gaps = 36/365 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E L M+ +G N ++ LLS R+G D+ +L++ M + PD TYSI
Sbjct: 247 EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY-SMLPDGFTYSI 305
Query: 69 LI---------KSCLKAFA--------------------------FDKVQALLSDMSTQG 93
L ++ L F K + +L + G
Sbjct: 306 LFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 365
Query: 94 IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTME 153
+ P T YNTLI+ Y + + +M S PD T N + I E
Sbjct: 366 LVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAE 425
Query: 154 KCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
+ + +G+ PS+ TFN L+D+YG+AG EK V+ MQ ++++ V+ AF
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAF 485
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ G + + + M + + P+ S++ AY +G E+ ++ + +S +
Sbjct: 486 CKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASI 545
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDL 333
+N L+ + E + ++ + +G +PD V+Y T++ A G + A E
Sbjct: 546 FTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Query: 334 VEKMD 338
+ K D
Sbjct: 606 MHKYD 610
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 9/309 (2%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM--ST 91
L + GR AF LL +PD ++ +++C+ A D+ A+L M S
Sbjct: 133 LLSVGRHADVRAAFGLLV----AAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSE 188
Query: 92 QGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT 151
P+ +YN +I R+ ++ +M+ P+ T N + G ++
Sbjct: 189 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEA 248
Query: 152 MEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVID 211
+ ++ G +P++ T+N+LL +AG ++ A+M+ M Y TY+I+ D
Sbjct: 249 GFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFD 308
Query: 212 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIML 271
R GD + M LF + + T L+ GK K VL + ++ ++
Sbjct: 309 GLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 368
Query: 272 DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
T +N L++ Y +++ + E M+ R +PD +TY ++ M E +
Sbjct: 369 TTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM---ITEAE 425
Query: 332 DLVEKMDET 340
DLV +M+++
Sbjct: 426 DLVMEMEKS 434
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 26/335 (7%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +L++ M G ANT +F ++ Y R DK +L M + D PD T++
Sbjct: 248 ERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLEQILHTMADA-DVDPDATTFNS 306
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQG-------------------IRPNTVTYNTLIDAYG 109
L+ + + ++++ + +G +P+ TY TL+ Y
Sbjct: 307 LVAAFVGLGELSLAESIVQSLRGEGEHQKRVPALLPKLREHSAKFQPDVRTYTTLMKGYV 366
Query: 110 RAKMFAEMELTLVKMLSEDCE---PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQP 166
+ ++ LV M E P+ T +RA G +D ++ + +
Sbjct: 367 QHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEARVILQEMATQKVAA 426
Query: 167 SINTFNILLDSY--GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEY 224
++ T+N LL ++ ++E M++ +V+YN +I+ + AGD +Q
Sbjct: 427 NVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALA 486
Query: 225 LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL-RFIDNSDIMLDTVFFNCLVDAY 283
+F MR ++ S VT +L++A+ +G+ E + V + + + +D V +N L+DAY
Sbjct: 487 VFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAY 546
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
R + LE M+ RG P TY T+V+ Y
Sbjct: 547 ARAGLEQDATRALEDMKSRGFSPTNATYNTLVKTY 581
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKN--TPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
+ +++T L+ Y + A LL M+ T P+ T++ I++C K D+ +
Sbjct: 354 DVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEAR 413
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
+L +M+TQ + N VTYNTL+ C V+ + RA
Sbjct: 414 VILQEMATQKVAANVVTYNTLLQGV--------------------C---VFPITDMKRAL 450
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
+ E + AG++ + ++N L++ Y +AG E+ AV M++ +
Sbjct: 451 ----------EIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAVFTRMREAKVPASK 500
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSE-RIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VTY ++ AF R+G + + +F M + R++ V +L+ AY AG + L
Sbjct: 501 VTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAGLEQDATRALE 560
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
+ + +N LV YGR + F ++ + + + R + D R
Sbjct: 561 DMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLWKEINARSVEEDSAAVR 610
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 11 AHELFQAMVDEGCDA---NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
A +L AM E A N +FT + A + GL D+A +L+ M T +V TY+
Sbjct: 374 AMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEARVILQEMA-TQKVAANVVTYN 432
Query: 68 ILIKSCLKAFAFDKVQAL--LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
L++ D +AL + DM G+ + V+YNTLI+ Y A + +M
Sbjct: 433 TLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAVFTRMR 492
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGIQPSINTFNILLDSYGKAGHF 184
T ++AF SG+ + + K + + ++ + +N L+D+Y +AG
Sbjct: 493 EAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAGLE 552
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
+ + +E M+ +S T TYN ++ +GR+ + Q+ L++ + + ++ +
Sbjct: 553 QDATRALEDMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLWKEINARSVEEDSAAV--- 609
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
KP +G+ + D + L+D++ R F V++ M ++G
Sbjct: 610 ------RDKPLVVGA---------LKPDAALLDSLIDSFVRGGYFQLALQVVDCMDRQG 653
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 18/188 (9%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A +F M + A+ ++ L+ A+ RSG + + M P + DV ++
Sbjct: 482 EQALAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNT 541
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI + +A L DM ++G P TYNTL+ YGR++ F ++ L ++ +
Sbjct: 542 LIDAYARAGLEQDATRALEDMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLWKEINARS 601
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
E D + G ++P + L+DS+ + G+F+
Sbjct: 602 VEEDSAAVRDKPLVVG------------------ALKPDAALLDSLIDSFVRGGYFQLAL 643
Query: 189 AVMEYMQK 196
V++ M +
Sbjct: 644 QVVDCMDR 651
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 96/234 (41%), Gaps = 25/234 (10%)
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
E +PD N L A N G ++ E+ +E + G++ + TFN+++ Y + +K
Sbjct: 225 ERMKPDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDK 284
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE-------------- 232
+ ++ M T+N ++ AF G+L E + + +R E
Sbjct: 285 LEQILHTMADADVDPDATTFNSLVAAFVGLGELSLAESIVQSLRGEGEHQKRVPALLPKL 344
Query: 233 -----RIKPSCVTLCSLVRAYGHAGKPE---KLGSVLRFIDNSDIMLDTVFFNCLVDAYG 284
+ +P T +L++ Y + +L ++ S M + V F + A
Sbjct: 345 REHSAKFQPDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACA 404
Query: 285 RLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA---YSTNGMKNHAKEFQDLVE 335
++ E + +L+ M + + VTY T+++ + MK + +D+ E
Sbjct: 405 KMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPITDMKRALEIVEDMKE 458
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 29/200 (14%)
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQM------ 222
+ +L+ + + G V+ M + Y + ++ V+ G+ D Q+
Sbjct: 147 DAMGLLVMASARVGTAHYSLGVLRTMLELGYHPPVKVWSAVVSKLGKNVDDAQLALKVFD 206
Query: 223 --------EYLFRLMRS-ERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
+ + +L R ER+KP + + A + G E+ + + + +T
Sbjct: 207 EVCQCVVEQGMIQLHRKMERMKPDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANT 266
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY--------------S 319
+ FN ++ Y R++ +++ +L M PD T+ ++V A+ S
Sbjct: 267 LTFNVMIKLYARVEKLDKLEQILHTMADADVDPDATTFNSLVAAFVGLGELSLAESIVQS 326
Query: 320 TNGMKNHAKEFQDLVEKMDE 339
G H K L+ K+ E
Sbjct: 327 LRGEGEHQKRVPALLPKLRE 346
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 15/318 (4%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLL--EHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQ 83
+T+ L+A RSG ++A S+L + P PDV TY+ L+ + +A D
Sbjct: 9 STRLMNVCLAALCRSGSLERAESVLIDAILLGMP---PDVVTYNTLLAAHCRAAGLDAGF 65
Query: 84 ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAF 143
A+L M G+ PN VTYN+LI A R + +ML PD W+ N +
Sbjct: 66 AVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCL 125
Query: 144 GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTI 203
SG + + + G+ P T+N LLD KAGH + Y+Q+ I
Sbjct: 126 FRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGI 185
Query: 204 VTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK-PEKLGSVLR 262
VTYN +I+ R+G + + R + P+ VT ++++ G+ + L + L
Sbjct: 186 VTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLS 245
Query: 263 FIDNSDIMLDTVFFNCLVDAY----GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
++ I VF C V + GR++ E E+M Q G + D Y T++
Sbjct: 246 LLEGGHI--PDVFPYCTVISALVKKGRVE---EANAYSELMIQSGSRLDTACYNTLIHLR 300
Query: 319 STNGMKNHAKEFQDLVEK 336
G + A E ++E+
Sbjct: 301 CQEGKLDDAFELLSMMEE 318
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 128/334 (38%), Gaps = 5/334 (1%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +LF M+ G + S+ L+ RSG + A+ + M P TY+ L
Sbjct: 98 RALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAE-KGVTPCTTTYNTL 156
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA + + G+ VTYNT+I+ R+ + L ++ +
Sbjct: 157 LDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEH 216
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T ++ G+ D + + G P + + ++ + K G E+ +A
Sbjct: 217 TPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANA 276
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
E M + YN +I + G L L +M ++ T LV
Sbjct: 277 YSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLC 336
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G E L +++ D+ + V +NCLVDA + ++ + ++ K D
Sbjct: 337 KLGHIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKSD---QVDAAIRLLHDMKLK-DDF 392
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
TY ++V G + A +F + + LA
Sbjct: 393 TYTSLVHGLCRVGRYHMASKFLRICLREGNNVLA 426
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 45/365 (12%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC N+ +F AL++ + + G LLE M QP+V +Y+ L++ K + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMA-ARGIQPNVVSYNGLLEGLCKLERWHE 63
Query: 82 VQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ L+ DM ++G R P+ VTY+TL+ Y +A E L +++S PD
Sbjct: 64 AEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + S ++ + E+ AG P++ TFN L+ + + E ++++ M
Sbjct: 124 MASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VTYN ++D +AG L++ E L M++ P V S V +GK
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243
Query: 260 VLRFIDNSD------------------------------------IMLDTVFFNCLVDAY 283
VL + +SD L+ V ++ +VD
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+L E + V+E M + GC+PD VTY ++V NG+ K ++ VE + E +
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLV-----NGLCKAGK-IEEAVEAVREMAME 357
Query: 344 MKRPD 348
+P+
Sbjct: 358 GCKPN 362
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 11/313 (3%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+ GC +F L+S R + A SLL+ M + + DV TY+ L+ KA
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS-GVKADVVTYNTLMDGLCKAG 201
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ + LL M G P+ V Y++ + ++ L +M D +P+V T N
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSA-GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
L SG+IDT + E+ S+ G ++ ++ ++D K G ++ +VME M +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK--- 253
+VTY+ +++ +AG +++ R M E KP+ VT CSLV G+
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 254 ----PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
E++ S D+ + T +N L+ + + + M+ +GC PD V
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVST--YNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 310 TYRTMVRAYSTNG 322
+Y T+V + +G
Sbjct: 440 SYSTIVEGLARSG 452
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + ++A +L + M GC + ++++ + +SG A +LE M+++ D
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS-D 252
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P+V TY+ ++ K+ D ++ M S+ G N V Y+T++D + E
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M C PDV T + + +G+I+ + + G +P+ T+ L+
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 178 YGKAGHFEKMSAVMEYMQKY-----HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
G + ++E M H ++ TYN +I +AG + F+ MRS+
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Query: 233 RIKPSCVTLCSLVRAYGHAGK 253
P V+ ++V +G+
Sbjct: 433 GCDPDGVSYSTIVEGLARSGR 453
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 5/330 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGL-FDKAFSLLEHMKNTPDC 59
G CK+ + + L + + G + ++ A R G D A S+ + N DC
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN--DC 341
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PDV TY+ILI K + L + S +G+ PN ++Y LI AY ++K +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++M C+PD+ T + SG +D K G+ P +N+L+
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G F + M + Y +ID F R+GD + +F L + +K V
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
++++ + +G ++ + + ++ ++ D ++ ++D Y + + A + M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKE 329
++ CKP+ VTY +++ + G A+E
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 16/344 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ + A +L M + GC + ++ L+ SG D A ++ + + PD
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-GVSPDA 450
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
Y++L+ K F + L S+M + I P+ Y TLID + R+ F E
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ + + DV N ++ F SG +D C + + P T++ ++D Y K
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ YM+K +VTY +I+ F GD K E F+ M+ + P+ VT +
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630
Query: 244 LVRAYG-HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL---KCFAEMKG----- 294
L+R+ + EK + + + + V FNCL+ + + K AE G
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 295 ------VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
M+ G Y + + +GM A FQD
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 139/321 (43%), Gaps = 5/321 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E +L + +GC N + ++ Y + G + A+ + + +K P + T+
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK-LKGFMPTLETFGT 280
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I K F LLS++ +G+R + N +IDA R + ++ +++ D
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C+PDV T N + G+ + ++ G+ P+ ++ L+ +Y K+ ++ S
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + IVTY I+I +G + + + + P L+
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 249 GHAGK--PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G+ P KL + + + +I+ D + L+D + R F E + V + ++G K
Sbjct: 461 CKTGRFLPAKL--LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 307 DKVTYRTMVRAYSTNGMKNHA 327
D V + M++ + +GM + A
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEA 539
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 138/332 (41%), Gaps = 10/332 (3%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+L + + + ++ + +E ++ + +L AY SG KA + +++ D
Sbjct: 108 LLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSV 167
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV + L+ +K+ + + +M +G + Y+T I G M E ++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG--DSVDNYSTCILVKG---MCNEGKVE 222
Query: 121 LVKMLSE-----DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + L E C P++ N + + G I+ +++ + G P++ TF ++
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ + K G F ++ +++ ++ N +IDA R G + + K
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P T L+ GK E L ++ + + + L+ AY + K + +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA 327
L M +RGCKPD VTY ++ +G + A
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 5/261 (1%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKMLSEDCEPDVWTMN 137
F++++ +L ++ + ++ + ++ AY + ++ +E+ + D PDV N
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN--ILLDSYGKAGHFEKMSAVMEYMQ 195
L S ++ K Y++ G S++ ++ IL+ G E ++E
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRG--DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW 232
Query: 196 KYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
IV YN +I + + GD++ +F+ ++ + P+ T +++ + G
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 256 KLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMV 315
+L + + + F N ++DA R + + + CKPD TY ++
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 316 RAYSTNGMKNHAKEFQDLVEK 336
G K A F D K
Sbjct: 353 NRLCKEGKKEVAVGFLDEASK 373
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 14/330 (4%)
Query: 14 LFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
L + M+ G + N+ + +LS ++G D+A SL MK PD+ YSI+I
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK-ADGLSPDLVAYSIVIHG 407
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K FD L +M + I PN+ T+ L+ + M E L ++S D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + SG I+ + ++ GI PS+ TFN L+ Y K + + +++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ Y + ++V+Y ++DA+ G+ K ++ L R M++E I P+ VT + +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 253 KPEKLGSVLRF------------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
K E VLR +++ I D + +N ++ R+K + LE+M+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
R TY ++ + G A F
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSF 677
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCD--ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q + + E D + SF +++S Y + G D A S +
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLV 254
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ILI + + L SDM+ G+ P++VTYN L + M +
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYG 179
+ ML + PDV T L G ID + S G + SI +++L
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ ++ M+ S +V Y+IVI + G +L+ M +RI P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G + S+L + +S LD V +N ++D Y + C E + +V+
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ G P T+ +++ Y A++ D+++
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 15/269 (5%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C++ +A L +++ G + + ++ Y +SG ++A L + + T
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET-G 498
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P V T++ LI K + + +L + G+ P+ V+Y TL+DAY ++
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----MEKCYEK-------FQSAGIQP 166
+M +E P T + + + + E+ +EK +S GI P
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
T+N ++ + H +E M+ + + TYNI+ID+ G +++ +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
++ + + S +L++A+ G PE
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 15/295 (5%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A L+ M D+ N+++ ALL + G+ +A SLL+ + ++ +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-T 465
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ Y+I+I K+ ++ L + GI P+ T+N+LI Y + + AE
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + P V + + A+ N G ++++ + ++ GI P+ T++++ +
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 181 AGH------------FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
FEK + M+ +TYN +I R L +
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
M+S + S T L+ + G K S + + ++ L + L+ A+
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ELF+ +++ G + +F +L+ Y ++ +A +L+ +K P V +Y+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVVSYTT 543
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA------------KMFAE 116
L+ + + L +M +GI P VTY+ + R ++F +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ L M SE PD T N ++ + E +S + S T+NIL+D
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
S G+ K + + +Q+ + S + Y +I A GD + LF
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N TY+T++D R + + L L +D P V + N + + G +D + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G+ PS+ + NIL++ G + + M K+ VTYNI+ F
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL------RFIDNSDIM 270
G + + R M + + P +T L+ G + +G VL R + + I+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID-MGLVLLKDMLSRGFELNSII 364
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+V + L GR+ E + M+ G PD V Y ++
Sbjct: 365 PCSVMLSGLCKT-GRID---EALSLFNQMKADGLSPDLVAYSIVIHG 407
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 15/227 (6%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +A ++ + G + S+T L+ AY G L MK
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK-AEGIP 570
Query: 61 PDVNTYSILIKS------------CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
P TYS++ K L+ F+K + L DM ++GI P+ +TYNT+I
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
R K + + L M S + + T N + + G I + Q + S
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ L+ ++ G E + + ++ +I Y+ VI+ R
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 11/326 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E H L + MV +G + + T L+ + KA ++E ++ QPDV Y+
Sbjct: 107 ESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG--QPDVFAYNA 163
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSE 127
LI K D +L M ++ P+TVTYN +I + R K+ +++ L ++LS+
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV-LNQLLSD 222
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C+P V T + A G +D K ++ S G++P + T+N ++ K G ++
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ ++ +++YNI++ A G ++ E L M SE+ P+ VT L+
Sbjct: 283 FEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGC 304
GK E+ ++L+ + + D ++ L+ A+ GRL E LE M GC
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF---LETMISDGC 399
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD V Y T++ NG + A E
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEI 425
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 155/331 (46%), Gaps = 3/331 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L M+ G + ++ ++ + G+ D+AF ++ +++ +PDV +Y+I
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE-LKGSEPDVISYNI 303
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ L +++ + L++ M ++ PN VTY+ LI R E + L+K++ E
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE-AMNLLKLMKEK 362
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD ++ + + AF G++D + E S G P I +N +L + K G ++
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + + S +YN + A +GD + ++ M S I P +T S++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G ++ +L + + + V +N ++ + + + VLE M GC+P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ TY ++ G + A E + + ++D
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 8/287 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D I +SC + + LL M +G P+ + LI + + + + +
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPK-AVRV 146
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++L + +PDV+ N + F +ID + ++ +S P T+NI++ S
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V+ + + T++TY I+I+A G + + L M S +KP T
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++R G ++ ++R ++ D + +N L+ A + E + ++ M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C P+ VTY ++ +G +E +L++ M E L PD
Sbjct: 327 EKCDPNVVTYSILITTLCRDG---KIEEAMNLLKLMKEKGLT---PD 367
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQ 60
L K + ++A E+F + + GC N+ S+ + SA SG +A +LE M N D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID-- 470
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ +I + D+ LL DM + P+ VTYN ++ + +A +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSG 147
L M+ C P+ T + G +G
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAG 557
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 45/365 (12%)
Query: 22 GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDK 81
GC N+ +F AL++ + + G LLE M D QP+V +Y+ L++ K + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMA-ARDIQPNVVSYNGLLEGLCKLERWHE 63
Query: 82 VQALLSDMSTQGIR--PNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCT 139
+ L+ DM ++G R P+ VTY+TL+ Y +A E L +++S PD
Sbjct: 64 AEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123
Query: 140 LRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHY 199
+ + S ++ + E+ AG P++ TFN L+ + + E ++++ M
Sbjct: 124 VASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VTYN ++D +AG L++ E L M++ P V S V +GK
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQ 243
Query: 260 VLRFIDNS--------------------------DIM----------LDTVFFNCLVDAY 283
VL + +S ++M L+ V ++ +VD
Sbjct: 244 VLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303
Query: 284 GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+L E + V+E M + GC+PD VTY ++V NG+ K ++ VE + E +
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLV-----NGLCKAGK-IEEAVEAVREMAME 357
Query: 344 MKRPD 348
+P+
Sbjct: 358 GCKPN 362
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 159/339 (46%), Gaps = 7/339 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQ--SFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
L K ++ +A EL + M+ G + +++ LLS Y ++G +++ LL+ + +
Sbjct: 55 LCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISR-GL 113
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
+PD Y+ ++ S K+ + LL +M G P +T+NTLI R K +
Sbjct: 114 RPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L KM + + DV T N + +G++ E+ E+ +++G P + ++ +
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL-KQMEYLFRLMRSERIKPSC 238
K+G V+E M+ H+ +VTYN ++D ++G + +E + ++ S+ +
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
V ++V G+ ++ SV+ + + D V ++ LV+ + E +
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
M GCKP+ VTY ++V + G E + +VE+M
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCG---RLAEAERMVEEM 389
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 147/336 (43%), Gaps = 9/336 (2%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + E++ EL + ++ G + +T ++++ +S +A LLE M C
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRA-GCC 149
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + T++ LI C + + +LL M+ G++ + VTYNTL+D +A E E
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +M + C PDV + + SG++ + E+ + + P++ T+N +LD K
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 181 AGHFEKMSAVMEYMQKYH-YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+G + +ME M +V Y+ V+D + G ++ + M +P V
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T SLV AGK E+ +R + + V + LV AE + ++E M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 300 -----QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
C P TY ++ G + A +F
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKF 425
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 13/320 (4%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
M+ GC +F L+S R + A SLL+ M + + DV TY+ L+ KA
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS-GVKADVVTYNTLMDGLCKAG 201
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ + LL M G P+ V Y++ + ++ + L +M +P+V T N
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSA-GIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
L SG+IDT + E+ S+ G ++ ++ ++D K G ++ +VME M +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
+VTY+ +++ +AG +++ R M E KP+ VT CSLV G+
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR--- 378
Query: 257 LGSVLRFIDNSDIML--------DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
L R ++ +N L+ + + + M+ +GC PD
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Query: 309 VTYRTMVRAYSTNGMKNHAK 328
V+Y T+V + +G A+
Sbjct: 439 VSYSTIVEGLARSGRALQAE 458
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + AH++ + M D D N ++ +L +SG D A ++E M ++ C
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V YS ++ K + ++++ M+ G RP+ VTY++L++ +A E
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-----PSINTFNILL 175
+ +M E C+P+ T + + G++ E+ E+ S G PS++T+N L+
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALI 410
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMR 230
KAG + + M+ V+Y+ +++ R+G Q E + +R
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 9/261 (3%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + ++A +L + M GC + ++++ + +SG A +LE M+++
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEM 117
P+V TY+ ++ K+ D ++ M S+ G N V Y+T++D + E
Sbjct: 254 -DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312
Query: 118 ELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ M C PDV T + + +G+I+ + + G +P+ T+ L+
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSW-----TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
G + ++E M ++ TYN +I +AG + F+ MRS+
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Query: 233 RIKPSCVTLCSLVRAYGHAGK 253
P V+ ++V +G+
Sbjct: 433 GCDPDGVSYSTIVEGLARSGR 453
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M G PN+VT+N L++ + + + E L M + D +P+V + N L +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 149 IDTMEKCYEKFQSAGIQ--PSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
E+ S G + P + T++ LL Y KAG E+ +++ + + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
V+ + ++ L + L M P+ +T +L+ E S+L+ +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
S + D V +N L+D + E + +LE M+ GC PD V Y + V +G
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 3/325 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDCQPDVNT 65
Q +KA+ LF AM+D G + ++++++SA ++ DKA + M KN PD
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN--GVMPDCIM 280
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ L+ + + + M G+ P+ VTY L+D + E ++
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
+PD T L + G + M + G+Q + FN+++ +Y K +
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ V M++ + IV Y V+D AG + F ++SE + P+ V +L+
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
K +K+ + + + I LDT+FFN ++ + E K + ++M + G +
Sbjct: 461 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE 520
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
P+ TY T++ Y +G + A +
Sbjct: 521 PNTNTYNTLIDGYCLDGKMDEAMKL 545
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 13/342 (3%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMK--NTPDCQP 61
+ +P AH++F ++ G A+ LS R+ A SL M P
Sbjct: 39 RATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPA-VAISLFNRMPRAGATSAAP 97
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIR--PNTVTYNT---LIDAYGRAKMFAE 116
++ TY I+I C + D A + + T G+R PN + ++ L A GRA
Sbjct: 98 NIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRA---MR 154
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAF-GNSGQIDTMEKCYEKFQSAGIQP-SINTFNIL 174
M++ L +M C+PD+++ L+ + ++ + G P + + +
Sbjct: 155 MDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 214
Query: 175 LDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERI 234
++ + G +K ++ + M S +VTY+ +I A + + + +F M +
Sbjct: 215 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 274
Query: 235 KPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
P C+ SLV Y +GKP++ + + + + D V + L+D + E +
Sbjct: 275 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 334
Query: 295 VLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
+ + + +RG KPD TY T++ Y+T G + DL+ K
Sbjct: 335 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 376
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 137/324 (42%), Gaps = 1/324 (0%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P++A +F+ M G + + ++TAL+ ++G +A + + + +PD TY
Sbjct: 293 KPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTY 351
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+ A ++ LL M +G++ +N ++ AY + E L M
Sbjct: 352 GTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ 411
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ PD+ L +G++D + +S G+ P+I F L+ ++K
Sbjct: 412 QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDK 471
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
+ + M + +N ++ + G + + + LF LM I+P+ T +L+
Sbjct: 472 VEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID 531
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y GK ++ +L + + + V +N +++ Y + + +L M +G P
Sbjct: 532 GYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNP 591
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
VTY +++ G AKE
Sbjct: 592 GIVTYEMLLQGLFQAGRTVAAKEL 615
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 7/310 (2%)
Query: 27 TQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALL 86
+ S L +A GR+ D + + C+PD+ +Y+IL+K + LL
Sbjct: 139 SSSQGPLCTAGGRAMRMDIVLRRMPEL----GCKPDLFSYTILLKGLCDDKTSQQALDLL 194
Query: 87 SDMSTQGIR-P-NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
M+ R P + V Y T+I+ R + ML PDV T + + A
Sbjct: 195 HIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALS 254
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
+ +D + + + G+ P + L+ Y +G ++ + + M ++ +V
Sbjct: 255 KTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 314
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
TY ++D + G + +F + KP T +L+ Y G ++ +L +
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 374
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ L FN ++ AY + E V M+Q+G PD V Y T++ T G
Sbjct: 375 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 434
Query: 325 NHA-KEFQDL 333
+ A +F L
Sbjct: 435 DDALSQFNSL 444
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 4/339 (1%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
M G CK + ++A + M+++GC + ++ ++ Y +SG+ +A LL+
Sbjct: 287 MRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAV-FKG 345
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
PD TY LI ++ L ++ + ++P+ V YN+L+ R +
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
+ +M+ E C PD+WT N + G I G P + TFN L+D Y
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K + ++E M Y + ++TYN V++ +AG K++ F M + +P+
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
+T L+ + + E+ V+ + ++ D V FN L+ + R + +
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Query: 299 MQQRGCKPDKVTYRTMVRAYSTN-GMKNHAKEFQDLVEK 336
+ ++G T+ ++ AYS+ M+ K F +++ K
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 624
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 145/359 (40%), Gaps = 38/359 (10%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
L ++ G AN + + G ++A +L+E M PDV TY+ L++
Sbjct: 233 LLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY--VAPDVVTYNTLMRGL 290
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL------------- 119
K + L M QG P+ TYNT+ID Y ++ M E EL
Sbjct: 291 CKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDR 350
Query: 120 ----TLVKML-----------------SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEK 158
+L+ L ++D +PD+ N ++ G I + +
Sbjct: 351 VTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNE 410
Query: 159 FQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
G P I T+NI+++ K G+ + VM Y + T+N +ID + +
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLK 470
Query: 219 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNC 278
L L M + I P +T S++ AGK +++ + + + +N
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530
Query: 279 LVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK-EFQDLVEK 336
L++ + ++ E GV+ M Q G PD V++ T++ + NG + A FQ L EK
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 133/309 (43%), Gaps = 3/309 (0%)
Query: 3 GKCKQPEKAHEL--FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q H L MV+EGC + ++ +++ + G A ++
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI-VKGYL 452
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV T++ LI K D L+ M T GI P+ +TYN++++ +A E+ T
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ + C P+ T N + F Q++ + G+ P +FN L+ + +
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G + + + + + YS T T+NI+I A+ +++ E +F M S+ KP T
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
LV A ++ + L + + + F +++ +E ++ +M
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692
Query: 301 QRGCKPDKV 309
+ G P+ V
Sbjct: 693 RMGVVPEVV 701
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 137/366 (37%), Gaps = 40/366 (10%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P A L +++ + GCDA ++ ++ G A L + M D PDV T+
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR-DVFPDVATF 214
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQG--------------------------------- 93
+ ++ + + + ALL+ + +G
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA 274
Query: 94 -IRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTM 152
+ P+ VTYNTL+ + E L +M+++ C PD +T N + + SG +
Sbjct: 275 YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334
Query: 153 EKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA 212
+ + G P T+ L++ G E+ + Q +V YN ++
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 213 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLD 272
R G + + M E P T ++ G V+ + D
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454
Query: 273 TVFFNCLVDAY-GRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
FN L+D Y RLK + ++ ++E M G PD +TY +++ G AKE
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQ-LVERMWTYGIAPDVITYNSVLNGLCKAG---KAKEVN 510
Query: 332 DLVEKM 337
+ E+M
Sbjct: 511 ETFEEM 516
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 16/308 (5%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ A + AY R+G A E M + C P Y+ ++ + + A D+ + M
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERM-DLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM 132
Query: 90 STQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLSE---DCEPDVWTMNCTL-RA 142
G+ P+ T+ + ++ GR + L L++ LSE D +P + CT+ R
Sbjct: 133 LAAGVAPDARTHTVRLKSFCLTGRP----HVALRLLRSLSERGCDAKPAAY---CTVVRG 185
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
G +++ + P + TFN +L + + G + A++ + K S
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
T NI I G L++ L M + P VT +L+R K ++ L
Sbjct: 246 KFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ N + D +N ++D Y + E +L+ +G PD+VTY +++ G
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 323 MKNHAKEF 330
A E
Sbjct: 365 DIERALEL 372
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 38/367 (10%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K K+ E+A L++ MV G + + +AL+ R G F +A++L M P+
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKI-GVAPNH 329
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY I S K ++ LL +M ++G+ + V Y T++D G+ E + L
Sbjct: 330 VTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRH 389
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
LS++ P+ T + A +G ID E+ + + + P++ TF+ +L+ K G
Sbjct: 390 ALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGC 449
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
K + M M+ + +VTY +ID F + + ++R M E ++ + + S
Sbjct: 450 IAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDS 509
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIML-------------------------------- 271
LV G E+ ++ + + ++L
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569
Query: 272 ---DTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAK 328
D V +N ++ RL F+E K L+ M+ G +PD+ TY TM+ A G N +K
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREG--NTSK 627
Query: 329 EFQDLVE 335
+ L E
Sbjct: 628 ALKLLNE 634
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 152/356 (42%), Gaps = 36/356 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M + G + + ++ ++SA R G KA LL MK + +P++ TY+ L
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWS-SIKPNLITYTTL 650
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY---------------------------- 101
+ L+A +K + LL++M++ G P +TY
Sbjct: 651 VVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGL 710
Query: 102 -------NTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEK 154
NTL+ M + + L +ML PD T N + S +D
Sbjct: 711 HADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFA 770
Query: 155 CYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 214
Y + G+ P+I TFN LL AG + V+ M+K +TY+I++ +
Sbjct: 771 TYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA 830
Query: 215 RAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTV 274
+ + + L+ M S+ P T SL+ + AG + + + ++ +
Sbjct: 831 KKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSS 890
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++ L++ + +L+ E++ +L+ M++ G KP K T +M RA+S GM A+
Sbjct: 891 TYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRL 946
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 1/289 (0%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ AL+ Y + A +++E M T DV Y+ L+ + D + M
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERM-TTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM 250
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
G+ P+ VT+ TLI Y + K E M+ PDV T++ + G+
Sbjct: 251 KADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + G+ P+ T+ +DS K + ++ M + +V Y V
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
+D G+ G +++ + + R S+ I P+CVT LV A+ AG + +L ++ +
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+ V F+ +++ + C A+ G + M+ G P+ VTY T++ +
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGF 479
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 3/319 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + E+A ++ + + + N ++T L+ A+ R+G D A +L M+ P
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK-SVSP 432
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T+S ++ +K K + M GI PN VTY TLID + + + E L +
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQ-GQEAALDV 491
Query: 122 VK-MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ ML E E + + ++ + +G I+ E ++ G+ + L+D K
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ V + + + + S V YN+ I+ R G + + + MR+ ++P T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
+++ A G K +L + S I + + + LV + K +L M
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671
Query: 301 QRGCKPDKVTYRTMVRAYS 319
G P +TYR +++A S
Sbjct: 672 SAGFTPTPLTYRRVLQACS 690
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 1/320 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++ Q +++ + + ++ R G F +A S L+ M+NT +PD TY+ +I
Sbjct: 558 ALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT-GLEPDQATYNTMI 616
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + K LL++M I+PN +TY TL+ A + + + L +M S
Sbjct: 617 SAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFT 676
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P T L+A S + + +E AG+ I +N L+ G K + V
Sbjct: 677 PTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIV 736
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
++ M + +T+N +I ++ L + M + + P+ T +L+
Sbjct: 737 LDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLES 796
Query: 251 AGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVT 310
AG+ + +V+ + + + + ++ LV Y + E + M +G P T
Sbjct: 797 AGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 856
Query: 311 YRTMVRAYSTNGMKNHAKEF 330
Y +++ ++ GM N AKE
Sbjct: 857 YNSLISDFAKAGMMNQAKEL 876
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 10/337 (2%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP-DVNTYSIL 69
A + M G + + + L R+GL +A +L E + V ++ L
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFAEMELTLVKMLS 126
I K A++ M+TQG+ + V YNTL+ + G A E+ +M +
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVA---ERMKA 252
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+ EP V T + + +I+ YE +G+ P + T + L+D + G F +
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
A+ M K + VTY ID+ + + + L M S + V +++
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD 372
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
G GK E+ VLR + +I + V + LVDA+ R + +L M+++ P
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLA 343
+ VT+ +++ G A + + KM ++ +A
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGY---MRKMKDSGIA 466
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 11/312 (3%)
Query: 25 ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV-- 82
A+T S+ L+ G A +L M C+ V + + + L + +
Sbjct: 115 ADTVSYNIFLAGLSEQGHGRLAPPVLSEM-----CKRGVPWDGVTMSTALVGLSRTGLVG 169
Query: 83 -QALLSDMSTQGIRPN---TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
A L++M +G + V +N LID Y + + A + +M ++ DV N
Sbjct: 170 EAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT 229
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ F SG D + E+ ++ G++PS+ T L+ Y K E+ + E M +
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+VT + ++D R G + LFR M + P+ VT C+ + + + +
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L + + + +D V + ++D G+ E K VL P+ VTY +V A+
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409
Query: 319 STNGMKNHAKEF 330
G + A++
Sbjct: 410 CRAGNIDGAEQM 421
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 7/306 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A +L + M + A T S + + A +SG +A ++++MK+ C+PDV T++
Sbjct: 35 QAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGA-CKPDVVTFN 93
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI KA D+ Q +L +M G N VTYNTLI+ A E L + M +
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT- 152
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEK 186
PD T N + F SG+ID E+ Q AG P T++IL++ K+ + K
Sbjct: 153 --TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210
Query: 187 MSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ E + + ++V +N ++D + +A DL + L M P VT +++
Sbjct: 211 ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTII 270
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G +K ++L + + D V + LV + E +++ M + GC
Sbjct: 271 DGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Query: 306 PDKVTY 311
P+ VTY
Sbjct: 331 PNAVTY 336
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+TQ++ A++ + +SG D+A+ LE MK C PD TYSILI K+ K L
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 86 LSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L +M + + V +NTL+D Y +A+ L ML C PDV T + +
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G +D EK S G +P + T+ +L+ KAG + +++ M + + V
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
TY++V D + L L +R +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 18/320 (5%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L+ A+ +G A LL M+ P P + Y+ + + K+ + ++ +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +P+ VT+NTLI +A E + L +M ++ T N + ++G+
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYN 207
+ Q P T+N ++ + K+G ++ +E M Q+ S TY+
Sbjct: 140 ---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
I+I+ ++ +L++ + L + M + S V +LV Y A ++ +L +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
D V ++ ++D R + +LE M RGCKPD VTY +V G
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG---- 312
Query: 327 AKEFQDLVEKMDETCLAMKR 346
KM E C +KR
Sbjct: 313 ---------KMVEACRLVKR 323
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 3 GKCKQP--EKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK KA EL Q M+ + C A+ +F L+ Y ++ D+A LL M C
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE-HGC 259
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TYS +I + DK ALL M ++G +P+ VTY L+ +A E
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +ML + C P+ T + ++D + G + F LL S
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVK 379
Query: 180 K 180
K
Sbjct: 380 K 380
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 14/330 (4%)
Query: 14 LFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
L + M+ G + N+ + +LS ++G D+A SL MK PD+ YSI+I
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK-ADGLSPDLVAYSIVIHG 407
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K FD L +M + I PN+ T+ L+ + M E L ++S D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + SG I+ + ++ GI PS+ TFN L+ Y K + + +++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ Y + ++V+Y ++DA+ G+ K ++ L R M++E I P+ VT + +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 253 KPEKLGSVLRF------------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
K E VLR +++ I D + +N ++ R+K + LE+M+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
R TY ++ + G A F
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSF 677
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCD--ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q + + E D + SF +++S Y + G D A S +
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLV 254
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ILI + + L SDM+ G+ P++VTYN L + M +
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYG 179
+ ML + PDV T L G ID + S G + SI +++L
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ ++ M+ S +V Y+IVI + G +L+ M +RI P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G + S+L + +S LD V +N ++D Y + C E + +V+
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ G P T+ +++ Y A++ D+++
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 15/269 (5%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C++ +A L +++ G + + ++ Y +SG ++A L + + T
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET-G 498
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P V T++ LI K + + +L + G+ P+ V+Y TL+DAY ++
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----MEKCYEK-------FQSAGIQP 166
+M +E P T + + + + E+ +EK +S GI P
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
T+N ++ + H +E M+ + + TYNI+ID+ G +++ +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPE 255
++ + + S +L++A+ G PE
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 15/295 (5%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + + A L+ M D+ N+++ ALL + G+ +A SLL+ + ++ +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-T 465
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D+ Y+I+I K+ ++ L + GI P+ T+N+LI Y + + AE
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L + P V + + A+ N G ++++ + ++ GI P+ T++++ +
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 181 AGH------------FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
FEK + M+ +TYN +I R L +
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
M+S + S T L+ + G K S + + ++ L + L+ A+
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ELF+ +++ G + +F +L+ Y ++ +A +L+ +K P V +Y+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVVSYTT 543
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA------------KMFAE 116
L+ + + L +M +GI P VTY+ + R ++F +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 117 MELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
+ L M SE PD T N ++ + E +S + S T+NIL+D
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 177 SYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFR 227
S G+ K + + +Q+ + S + Y +I A GD + LF
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N TY+T++D R + + L L +D P V + N + + G +D + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G+ PS+ + NIL++ G + + M K+ VTYNI+ F
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL------RFIDNSDIM 270
G + + R M + + P +T L+ G + +G VL R + + I+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID-MGLVLLKDMLSRGFELNSII 364
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+V + L GR+ E + M+ G PD V Y ++
Sbjct: 365 PCSVMLSGLCKT-GRID---EALSLFNQMKADGLSPDLVAYSIVIHG 407
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 15/227 (6%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +A ++ + G + S+T L+ AY G L MK
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK-AEGIP 570
Query: 61 PDVNTYSILIKS------------CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
P TYS++ K L+ F+K + L DM ++GI P+ +TYNT+I
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
R K + + L M S + + T N + + G I + Q + S
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGR 215
+ L+ ++ G E + + ++ +I Y+ VI+ R
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 10/333 (3%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKN-TPDCQPDVNTYSILIKS 72
+ + M + GC N S T +L +A LL M + C P+V +YS +
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDG 207
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
LK DK A +M + I PN VTY+++I A + + + +M+ P+
Sbjct: 208 LLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+T + F +SGQ+ K EK S G++P++ T++ +D K G + +
Sbjct: 268 CFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFY 327
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
M K I TY+ ++ + G L +M LF LM ++P +L+ A G
Sbjct: 328 SMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387
Query: 253 KPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
K ++ V + + + + V +N L++ Y ++ + + M G P+ +TY
Sbjct: 388 KVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYN 447
Query: 313 TMVRAYSTNGMKNHAKEF---------QDLVEK 336
M++ G AKEF +DL+E+
Sbjct: 448 IMLQGLFRTGRTGTAKEFYVQIIKSGKKDLIEQ 480
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 39/267 (14%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KN--TPDC- 59
K P+KA+ ++ M+D N +++++++A + DKA + + M KN TP+C
Sbjct: 210 KGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCF 269
Query: 60 ------------------------------QPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+P+V TYS + K + + + M
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSM 329
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G++P+ TY++L+ Y EM M+ D +PD + N + A G++
Sbjct: 330 VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
D + K + G++P+ T+N L++ Y K E A+ + M S +TYNI+
Sbjct: 390 DEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIM 449
Query: 210 IDAF---GRAGDLKQMEYLFRLMRSER 233
+ GR G K E+ ++++S +
Sbjct: 450 LQGLFRTGRTGTAK--EFYVQIIKSGK 474
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 10/337 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
E A ++F ++ G A +S L+ R A S M P V+TY
Sbjct: 35 EDALDVFDELLRRGIGAPIRSLNGALADVARDNP-AAAVSRFNRMARAGASMVTPTVHTY 93
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MELTLVKML 125
ILI C A D A L + +G R + +N L+ K + M++ L M
Sbjct: 94 GILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMT 153
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF--QSAGIQPSINTFNILLDSYGKAGH 183
C P+V++ L+ + + + G P++ +++ + D K G
Sbjct: 154 ELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGD 213
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAF--GRAGDLKQMEYLFRLMRSERIKPSCVTL 241
+K A M +VTY+ +I A G+A D K ME R++++ + P+C T
Sbjct: 214 PDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMD-KAMEVHDRMVKNG-VTPNCFTY 271
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
SLV + +G+ + L + ++ + + V ++ +D + E + + M +
Sbjct: 272 TSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVK 331
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
RG KPD TY +++ Y+ G DL+ + D
Sbjct: 332 RGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSD 368
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
+L+ C K DK + + M+ G+ N Y I+ YGR + F + E ++L+
Sbjct: 160 VLLAYC-KDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT 218
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF---QSAGIQPSINTFNILLDSYGKAGHF 184
P T ++++ +G++D +++ ++ S ++P +N+++ +YGK G
Sbjct: 219 GPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKV 278
Query: 185 EKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
E+ +V + M++ + TIVT+N ++ K E +FR +++ ++ P + +L
Sbjct: 279 EQAMSVYQSMKRERVALTIVTFNSLLAC---QKTWKDAEDVFRKLQAAKLDPDVFSYTAL 335
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGC 304
V AY A + E + + + I V +N L++AY + K + VL+ M+Q GC
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPDF 349
P +Y +++ AY + +L+ K ++T L MK D
Sbjct: 396 TPTVESYTSLISAYVS----------VNLMAKAEQTVLRMKEADL 430
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 9/326 (2%)
Query: 1 MLGKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+L CK Q +K +FQ M + G AN + +T + YGR FDKA ++ + + T
Sbjct: 161 LLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT-G 219
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQ---ALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
P TY ++KS +A D VQ L++D + ++P+ YN +I YG+
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ M E + T N L E + K Q+A + P + ++ L+
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTALV 336
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
++Y KA E A + M T V YN +I+A+ + D + + + M+
Sbjct: 337 NAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCT 396
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGV 295
P+ + SL+ AY K + + +D+ + F L+ Y M
Sbjct: 397 PTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRS 456
Query: 296 LEVMQQRGCKPDKVTYRTMVRAYSTN 321
E M+ G +P++ Y +V AY +N
Sbjct: 457 FETMKLAGLEPNRHVYTVLVNAYGSN 482
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ++F+ + D + S+TAL++AY ++ + A + + M +P Y+ LI
Sbjct: 313 AEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMI-AAGIRPTQVAYNALI 371
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ K + +A+L M G P +Y +LI AY + A+ E T+++M D +
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T + + N ++D M + +E + AG++P+ + + +L+++YG F+ SA+
Sbjct: 432 PNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFD--SAI 489
Query: 191 MEYMQ 195
+ Y Q
Sbjct: 490 IWYKQ 494
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ + +AHEL + G T + +L+ L D A L MK C PD
Sbjct: 856 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPD 914
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
TY++L+ + K+ +++ + +M +G VTYNT+I +++ +
Sbjct: 915 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 974
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
++S+ P T L +G+I+ E + + G + + +NILL+ + AG
Sbjct: 975 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 1034
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ EK+ + + M + I +Y I+ID +AG L FR + ++P +T
Sbjct: 1035 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1094
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
L+ G + + E+ S+ + I+ + +N L+ G+ AE + E + +
Sbjct: 1095 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1154
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHA 327
G KP+ TY ++R YS +G + A
Sbjct: 1155 GWKPNVFTYNALIRGYSVSGSTDSA 1179
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 37/357 (10%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
M + G N ++ L+ +SG FD+ + + P V TYS+L+ +
Sbjct: 273 LPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYRVMMVDGVVPSVRTYSVLMVAFG 331
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + V LL +M G++PN +Y I G+AK F E L KM +E C+PDV
Sbjct: 332 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 391
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T ++ ++G+I + + K + + +P T+ LLD +G G + + + M
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDL-----------------KQMEY------------- 224
+ Y+ +V Y VIDA + G + +Q Y
Sbjct: 452 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 511
Query: 225 -----LFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
LF+ M KP+ T + YG +G+ K + + I+ D V N +
Sbjct: 512 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 571
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQDLVE 335
+ + K V ++ G PD +TY M++ S + A K F D++E
Sbjct: 572 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 628
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
E++ AM +G + N ++TA++ A + G +A + + MK P+ +Y+ LI
Sbjct: 446 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSLISG 504
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA----KMFAEMELTLVKMLSED 128
LKA F L M G +PN T+ I+ YG++ K EL M S+
Sbjct: 505 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL----MKSKG 560
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
PDV N L SG++ ++ + + ++ G+ P T+ +++ KA F++
Sbjct: 561 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 620
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
+ M + + ++ N +ID +AG + +F ++ ++P+ T +L+
Sbjct: 621 KIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGL 680
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
G GK +++ +L + +S+ + + +N ++D + + +L M +GC PD
Sbjct: 681 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDL 740
Query: 309 VTYRTMV 315
+Y T++
Sbjct: 741 SSYNTVI 747
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 1/326 (0%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
GK + E L + M G N S+T + G++ FD+A+ +L M+N C+P
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE-GCKP 388
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T+++LI+ A + + M +P+ VTY TL+D +G +
Sbjct: 389 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 448
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M ++ +V + A G++ + +++ + GI P ++N L+ + KA
Sbjct: 449 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 508
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
F + ++M + T+ + I+ +G++G+ + + LM+S+ I P V
Sbjct: 509 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 568
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++ +G+ V + + DT+ + ++ + F E + M +
Sbjct: 569 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 628
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHA 327
C PD + +++ G + A
Sbjct: 629 NNCVPDVLAVNSLIDTLYKAGRGDEA 654
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A ELF+ M G N + ++ YG+SG KA E MK + PDV + ++
Sbjct: 514 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK-SKGIVPDVVAGNAVL 572
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K+ + + ++ G+ P+T+TY +I +A F E M+ +C
Sbjct: 573 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 632
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PDV +N + +G+ D + + + + ++P+ T+N LL G+ G +++ +
Sbjct: 633 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 692
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAG 217
+E M +Y ++TYN ++D + G
Sbjct: 693 LEEMYHSNYPPNLITYNTILDCLCKNG 719
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LG+ K+ ++A+ + M +EGC + + T L+ +G A + MK + D +
Sbjct: 364 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS-DQK 422
Query: 61 PDVNTYSIL---------------IKSCLKAFAF-DKVQA-------------------L 85
PD TY L I + +KA + D V A +
Sbjct: 423 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEM 482
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGN 145
+M +GI P +YN+LI + +A F + M +P+ +T + +G
Sbjct: 483 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 542
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
SG+ + YE +S GI P + N +L K+G V ++ S +T
Sbjct: 543 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 602
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
Y ++I +A + +F M P + + SL+ AG+ ++ + +
Sbjct: 603 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ +N L+ GR E+ +LE M P+ +TY T++ NG N
Sbjct: 663 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 722
Query: 326 HA 327
A
Sbjct: 723 DA 724
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK LFQ MVD+G + + +S+T ++ ++G + + + +PD+ TY++
Sbjct: 1037 EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-GLEPDLITYNL 1095
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI K+ ++ +L ++M +GI PN TYN+LI G+A AE ++L++
Sbjct: 1096 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1155
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPS 167
+P+V+T N +R + SG D+ Y + G P+
Sbjct: 1156 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 13/316 (4%)
Query: 13 ELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS----- 67
E+F M + AN +F A+ G G A L MK +N Y+
Sbjct: 236 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIV---LNAYTYNGLV 292
Query: 68 -ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
L+KS A + + ++ D G+ P+ TY+ L+ A+G+ + + L +M +
Sbjct: 293 YFLVKSGFDREALEVYRVMMVD----GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 348
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
+P+V++ +R G + + D + K ++ G +P + T +L+ AG
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 408
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
V M+K VTY ++D FG GD + + ++ M+++ + V +++
Sbjct: 409 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 468
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
A G+ + + + I+ + +N L+ + + F + + + M G KP
Sbjct: 469 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 528
Query: 307 DKVTYRTMVRAYSTNG 322
+ T+ + Y +G
Sbjct: 529 NGYTHVLFINYYGKSG 544
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 36/304 (11%)
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LIK K + L+ + G+ T YN+LI + E +M
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ---------------------------- 160
C PD +T N L A G S +I+ M K E+
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970
Query: 161 -------SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 213
S G P+ T+ LLD KAG E + M +Y YNI+++
Sbjct: 971 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030
Query: 214 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDT 273
AG+ +++ +LF+ M + I P + ++ AG+ + R + + D
Sbjct: 1031 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1090
Query: 274 VFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHA-KEFQD 332
+ +N L+D G+ K E + MQ++G P+ TY +++ G A K +++
Sbjct: 1091 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1150
Query: 333 LVEK 336
L+ K
Sbjct: 1151 LLTK 1154
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 104 LIDAYGR----AKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
L+ +GR A++F M+ +VK +V T G G + +
Sbjct: 224 LMRGHGRVGDMAEVFDVMQRQIVKA-------NVGTFAAIFGGLGVEGGLRSAPVALPVM 276
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ AGI + T+N L+ K+G + V M ++ TY++++ AFG+ D+
Sbjct: 277 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 336
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNS----DIMLDTVF 275
+ + +L R M + +KP+ + +R G A + ++ +L ++N D++ TV
Sbjct: 337 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 396
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
L DA GR+ ++ K V M++ KPD+VTY T++ + NG
Sbjct: 397 IQVLCDA-GRI---SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNG 439
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 36/351 (10%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + A +F + G +T ++T ++ ++ FD+A + M +C P
Sbjct: 575 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN-NCVP 633
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV + LI + KA D+ + + + P TYNTL+ GR E+ L
Sbjct: 634 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 693
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+M + P++ T N L +G ++ + G P ++++N ++ K
Sbjct: 694 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 753
Query: 182 GHFEKMSAVMEYMQK-----YHYSWTIV-----------TYNIVIDAFGRAGDLKQMEYL 225
+ + ++ M+K Y TI+ +I+ D F + G
Sbjct: 754 ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 813
Query: 226 FRLMR--------------SERIKPSCVT-----LCSLVRAYGHAGKPEKLGSVLRFIDN 266
LM +E I S +T LC L++ K + +++ +
Sbjct: 814 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 873
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ L T +N L+ +G+ M++ GC PD+ TY ++ A
Sbjct: 874 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA 924
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%)
Query: 137 NCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQK 196
N L G++ M + ++ Q ++ ++ TF + G G + M++
Sbjct: 219 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 278
Query: 197 YHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEK 256
TYN ++ ++G ++ ++R+M + + PS T L+ A+G E
Sbjct: 279 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 338
Query: 257 LGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVR 316
+ +LR ++ + + + + G+ K F E +L M+ GCKPD +T+ +++
Sbjct: 339 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 398
Query: 317 AYSTNGMKNHAKEFQDLVEKMDE 339
G + AK+ ++K D+
Sbjct: 399 VLCDAGRISDAKDVFWKMKKSDQ 421
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 150 DTMEKCYEKFQSAGIQPSIN----TFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
D + E+F+SA +P + + N +L+ G M+ V + MQ+ + T
Sbjct: 193 DGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 252
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
+ + G G L+ +M+ I + T LV +G + V R +
Sbjct: 253 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 312
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKN 325
++ ++ L+ A+G+ + + +L M+ G KP+ +Y +R K
Sbjct: 313 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQ--AKR 370
Query: 326 HAKEFQDLVEKMDETCLAMKRPD 348
+ ++ L + +E C +PD
Sbjct: 371 FDEAYRILAKMENEGC----KPD 389
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 37/363 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E+++ M + G ++ LL +Y + G + LL M+ C P+ TY++L
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR-GCAPNDVTYNVL 275
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K F++ + L+ +M G++ + TYN LI Y M AE +M+ +
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V T N + G++ + + + P + ++N L+ Y + G+ K
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR--- 246
+ + ++ + TIVTYN ++D R G+L+ + L M +E I P VT LV
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 247 -----------------------AYGHAGK---PEKLGSVLRFIDNSDIML------DTV 274
+Y +A + KLG R + ML D +
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+N +VD +L E +L+ M G PD VTY +++ A+ NG +E F ++
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575
Query: 334 VEK 336
+ K
Sbjct: 576 LSK 578
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A L M+ G + ++ L+ Y G+ +A SL E M P
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV-LKGASP 337
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ I K LSDM + P+ V+YNTLI Y R + L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL------- 174
++ S P + T N L G+++ ++ + + GI P I T+ IL
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 175 -------------------LDSYG---------KAGHFEKMSAVMEYMQKYHYSWTIVTY 206
LDSY K G + ++ E M + ++ Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N+V+D + G+L++ L + M S+ + P VT S++ A+ G+ K + + +
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 267 SDIMLDTVFFNCLVDAY---GRLK----CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY- 318
+ V + L+ + GRL+ F+EM Q++G P+ +TY +++
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM-------QEKGILPNVITYNSLINGLC 630
Query: 319 STNGMKNHAKEFQDLVEK 336
M F ++VEK
Sbjct: 631 KVRRMDQAYNFFAEMVEK 648
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 152/372 (40%), Gaps = 42/372 (11%)
Query: 3 GKCK--QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK + A + M+ + S+ L+ Y R G KAF L + +++
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI-YLF 406
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P + TY+ L+ + + Q L +M +GI P+ VTY L++ + + +
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ML E E D + + G E+ + G P + +N+++D K
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G+ E+ S +++ M VTY +I A G L++ +F M S+ + PS VT
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 241 LCSLVRAYGHAGKPEKLGSVLRF--IDNSDIMLDTVFFNCLVDAYGRLK-------CFAE 291
L+ +GHAGK + + F + I+ + + +N L++ +++ FAE
Sbjct: 587 YTVLI--HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644
Query: 292 M--KGVL--------------------------EVMQQRGCKPDKVTYRTMVRAYSTNGM 323
M KG+ + M RG +PD T+ +++ +
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCK 704
Query: 324 KNHAKEFQDLVE 335
++ + L++
Sbjct: 705 LQAVRQLESLLD 716
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 13/271 (4%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM--KNTPD 58
G CK A E F M+ EG + ++ ++ + + G +AFSL E M K P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP- 511
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY---GRAKMFA 115
PD+ Y++++ K ++ LL M + G+ P+ VTY ++I A+ GR +
Sbjct: 512 --PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
E+ +MLS+ P V T + G+++ + + Q GI P++ T+N L+
Sbjct: 570 EI---FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
+ K ++ M + +Y I+I+ G+ ++ L++ M ++
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQ 686
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
P T +L++ G K + + + +D+
Sbjct: 687 PDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 23/312 (7%)
Query: 8 PEKAHELFQ-AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
P A LF+ A G + F A+L ++ L A+ ++E + N +
Sbjct: 95 PRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR----IV 150
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+LI C+ + K+ LL I Y + M + KM+
Sbjct: 151 DVLIGGCVSSEVSVKILDLL------------------IWVYSKKSMVEQCLSVFDKMIK 192
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PDV N LR + + + Y GI+P+I T+N LLDSY K G ++
Sbjct: 193 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQ 252
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ MQ+ + VTYN++I+ + G+ +Q + L M +K S T L+
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y + G + S+ + +N + +L ++ L M P
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 307 DKVTYRTMVRAY 318
D V+Y T++ Y
Sbjct: 373 DVVSYNTLIYGY 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
S+ ++L+ Y K E+ +V + M K S + N ++ + + ++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
R M IKP+ VT +L+ +Y GK ++ +L + + V +N L++ +
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
F + KG++ M + G K TY ++ Y GM A Q+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 1/206 (0%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
E V ++ + + ++ ++K + + P + N +L K
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V M ++ TIVTYN ++D++ + G ++Q L M+ P+ VT L+
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ E+ ++ + + + + +N L+ Y AE + E M +G P
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340
Query: 310 TYRTMVRAYSTNG-MKNHAKEFQDLV 334
TY + + G M + ++ D++
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDML 366
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A+ F MV++G N S+T L++ G + +A SL + M + QP
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR-GVQP 687
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQ 92
D T+S L+K K V+ L S + ++
Sbjct: 688 DSCTHSALLKQLGKDCKLQAVRQLESLLDSE 718
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 7/306 (2%)
Query: 9 EKAHELFQAMVDEGCDANTQS-FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYS 67
+ A +L + M + A T S + + A +SG +A ++++MK+ C+PDV T++
Sbjct: 35 QAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGA-CKPDVVTFN 93
Query: 68 ILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSE 127
LI KA D+ Q +L +M G N VTYNTLI+ A E L + M +
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT- 152
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF-QSAGIQPSINTFNILLDSYGKAGHFEK 186
PD T N + F SG+ID E+ Q AG P T++IL++ K+ + K
Sbjct: 153 --TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210
Query: 187 MSAVM-EYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
++ E + + ++V +N ++D + +A DL + L M P VT +++
Sbjct: 211 ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTII 270
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
G +K ++L + + D V + LV + E +++ M + GC
Sbjct: 271 DGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Query: 306 PDKVTY 311
P+ VTY
Sbjct: 331 PNAVTY 336
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 26 NTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
+TQ++ A++ + +SG D+A+ LE MK C PD TYSILI K+ K L
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 86 LSDM-STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFG 144
L +M + + V +NTL+D Y +A+ L ML C PDV T + +
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 145 NSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIV 204
G +D EK S G +P + T+ +L+ KAG + +++ M + + V
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
TY++V D + L L +R +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 18/320 (5%)
Query: 29 SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSD 88
++ L+ A+ +G A LL M+ P P + Y+ + + K+ + ++ +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 89 MSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQ 148
M +P+ VT+NTLI +A E + L +M ++ T N + ++G+
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 149 IDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM-QKYHYSWTIVTYN 207
+ Q P T+N ++ + K+G ++ +E M Q+ S TY+
Sbjct: 140 ---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 208 IVIDAFGRAGDLKQMEYLFRLMRSER-IKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
I+I+ ++ +L++ + L + M + S V +LV Y A ++ +L +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
D V ++ ++D R + +LE M RGCKPD VTY +V G
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG---- 312
Query: 327 AKEFQDLVEKMDETCLAMKR 346
KM E C +KR
Sbjct: 313 ---------KMVEACRLVKR 323
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 3 GKCKQP--EKAHELFQAMVD-EGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC 59
G CK KA EL Q M+ + C A+ +F L+ Y ++ D+A LL M C
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE-HGC 259
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMEL 119
PDV TYS +I + DK ALL M ++G +P+ VTY L+ +A E
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
+ +ML + C P+ T + ++D + G + F LL S
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVK 379
Query: 180 K 180
K
Sbjct: 380 K 380
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 154/368 (41%), Gaps = 42/368 (11%)
Query: 1 MLGKCKQPEKAHELFQAMVDEG-CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNT--- 56
ML + EK HE++ M ++G C +T +++AL+SA+G+ G +D A L + MK
Sbjct: 207 MLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLY 266
Query: 57 -------------------------------PDCQPDVNTYSILIKSCLKAFAFDKVQAL 85
C V TY+ IK KA D +
Sbjct: 267 PTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRV 326
Query: 86 LSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV---KMLSEDCEPDVWTMNCTLRA 142
DM G +P+ V N+LI+ G+ +E+TL KM S C+P+V T N ++A
Sbjct: 327 FLDMIKDGCKPDVVLINSLINILGKV---GRLEVTLKLFRKMESWQCKPNVVTYNTVIKA 383
Query: 143 -FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSW 201
F +EK + GI PS T++IL+D + K EK ++E M + +
Sbjct: 384 LFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPP 443
Query: 202 TIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL 261
Y +I++ G+ + LF ++ S +++ +G G+ + +
Sbjct: 444 CPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLF 503
Query: 262 RFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTN 321
++ D +N L+ R E + +L M + GC PD ++ ++ +
Sbjct: 504 NEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLART 563
Query: 322 GMKNHAKE 329
G+ + A E
Sbjct: 564 GVPDRAIE 571
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 145/376 (38%), Gaps = 39/376 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
+LGK K KA +F + C ++ +++ + G +K + M N +C
Sbjct: 172 LLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCF 231
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TYS LI + K +D L +M G+ P Y TL+ Y + +
Sbjct: 232 PDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDV 291
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ +M + C V+T ++ G +G++D + + G +P + N L++ GK
Sbjct: 292 IKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGK 351
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGRAGDLKQMEYLFRLMRSERIKPSCV 239
G E + M+ + +VTYN VI A F + F M+ I PS
Sbjct: 352 VGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSF 411
Query: 240 TLCSLVRAYGHAGKPEK--------------------------LGSVLRFIDNSDIMLD- 272
T L+ + + EK LG V R+ +++ L+
Sbjct: 412 TYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLEL 471
Query: 273 --------TVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ ++ +G+ +E + M++ G KPD Y ++ GM
Sbjct: 472 KENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMI 531
Query: 325 NHAKEFQDLVEKMDET 340
+ A Q L+ MDE
Sbjct: 532 DEA---QSLLRTMDEN 544
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LGK + + A+ +F M+ +GC + +L++ G+ G + L M++ C+P
Sbjct: 314 LGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESW-QCKP 372
Query: 62 DVNTYSILIKSCLKAFA-FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
+V TY+ +IK+ + A + + M GI P++ TY+ LID + + E L
Sbjct: 373 NVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRI-EKALL 431
Query: 121 LVKMLSEDCEPDVWTMNCTL-RAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L++ + E P C+L + G + + + + + + S + +++ +G
Sbjct: 432 LLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFG 491
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G + + M+K + YN ++ RAG + + + L R M P
Sbjct: 492 KCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLN 551
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
+ ++ G P++ + + +S I D V +N ++ F E ++ M
Sbjct: 552 SHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREM 611
Query: 300 QQRGCKPDKVTYRTMVRA 317
+G + + +TY +++ A
Sbjct: 612 NLKGFEYNNITYTSILEA 629
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFD------KAFSLLEHMK 54
+LGK + E +LF+ M C N ++ ++ A LF+ +A S E MK
Sbjct: 348 ILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKA-----LFECKAPASEAASWFEKMK 402
Query: 55 NTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMF 114
P TYSILI K +K LL +M +G P Y +LI++ G+ K +
Sbjct: 403 GC-GIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRY 461
Query: 115 -AEMELTLVKMLSEDC-EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 172
A EL L L E+C ++ FG G++ + + + G +P + +N
Sbjct: 462 EAANELFL--ELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYN 519
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
L+ +AG ++ +++ M + S + ++NI+++ R G + +F M+S
Sbjct: 520 ALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSS 579
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
IKP V+ +++ HAG E+ ++R ++ + + + +++A G++
Sbjct: 580 IIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKV 633
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC-QPD 62
K + EKA L + M ++G ++ +L+++ G+ ++ A L +K +C
Sbjct: 422 KTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKE--NCGHSS 479
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
Y+++IK K + L ++M G +P+ YN L+ RA M E + L
Sbjct: 480 ARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLR 539
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
M C PD+ + N L +G D + + K +S+ I+P ++N +L AG
Sbjct: 540 TMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAG 599
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGD 218
FE+ + +M M + + +TY +++A G+ +
Sbjct: 600 LFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVDE 635
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 49/322 (15%)
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT-----VTYNTLIDAYGRAKMF 114
+ D +++ LI S +A + ++ + DM +R +T V + ++ G+AKM
Sbjct: 124 EHDSSSFMALIHSLDEAGFYGEMWKTIQDM----VRSSTCVISSVYLSEIVKLLGKAKMV 179
Query: 115 ------------------AEMELTLVKMLSED------------------CEPDVWTMNC 138
A +++ ML ++ C PD T +
Sbjct: 180 NKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSA 239
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
+ AFG G D+ + +++ + G+ P+ + LL Y K EK V++ M+
Sbjct: 240 LISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKG 299
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ T+ TY I G+AG + +F M + KP V + SL+ G G+ E
Sbjct: 300 CTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTL 359
Query: 259 SVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFA-EMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+ R +++ + V +N ++ A K A E E M+ G P TY ++
Sbjct: 360 KLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDG 419
Query: 318 YSTNGMKNHAKEFQDLVEKMDE 339
+ N ++ L+E+MDE
Sbjct: 420 FCKT---NRIEKALLLLEEMDE 438
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 1/323 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L + M+ G + ++ A++ + G+ ++A L+ + + C+PDV +Y+IL
Sbjct: 235 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL-TSKGCEPDVISYNIL 293
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+++ L +D+ + L+++M ++G PN VTY+ LI + R E L M+ ++
Sbjct: 294 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PD ++ + + A G++D + S G P I +N +L + K G+ +
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ ++ + +YN +I A GD + + M S+ I P +T SL+
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G E+ +L ++ S + +N ++ +++ + G+ M ++GC+P++
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 533
Query: 310 TYRTMVRAYSTNGMKNHAKEFQD 332
TY ++ G + A E +
Sbjct: 534 TYILLIEGIGFAGWRTEAMELAN 556
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 148/333 (44%), Gaps = 1/333 (0%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K Q E A ++ M G + ++ ++ + A ++L+ + +C P V
Sbjct: 159 KVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL-LDNCMPTV 217
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ILI++ + ++ LL +M +G+ P+ TYN +I + M +
Sbjct: 218 ITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITS 277
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
+ S+ CEPDV + N LRAF N G+ D EK + S G +P+ T++IL+ S + G
Sbjct: 278 LTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 337
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
++ +V++ M + + +Y+ +I A + G L + M S P V +
Sbjct: 338 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 397
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
++ A G + + + + +N ++ A + G++ M +G
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
PD++TY +++ +G+ A D +E+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 2/316 (0%)
Query: 15 FQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCL 74
+ +V++G + T L+ + +KA ++E +++ +PDV Y+ +I
Sbjct: 101 LECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES--HTEPDVFAYNAVISGFC 158
Query: 75 KAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVW 134
K + +L+ M +G P+ VTYN +I + + L ++L ++C P V
Sbjct: 159 KVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVI 218
Query: 135 TMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYM 194
T + A G I+ K E+ + G+ P + T+N ++ K G E+ + ++ +
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278
Query: 195 QKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKP 254
+++YNI++ AF G + E L M S +P+ VT L+ + G+
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338
Query: 255 EKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
++ SVL+ + ++ DT ++ L+ A + G+++ M GC PD V Y T+
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 398
Query: 315 VRAYSTNGMKNHAKEF 330
+ A NG N A E
Sbjct: 399 LAALCKNGNANQALEI 414
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L C +A + AM+ +G D + ++ +L+S R GL ++A LL+ M+ + +P
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS-GFRP 495
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAE-MEL 119
V +Y+I++ K D + ++M +G RPN TY LI+ G A E MEL
Sbjct: 496 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 5 CKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CK+ E + LF M + G + ++ +L+ YG+ G ++ SL MK+ C PD
Sbjct: 300 CKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV-GCVPD 358
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ TY+ LI K + S+M G++PN VTY+TLIDA+ + M
Sbjct: 359 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM-------- 410
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
G I K + + G+ P+ T+ L+D+ KAG
Sbjct: 411 -----------------------QGAI----KLFVDMRRTGLLPNEFTYTSLIDANCKAG 443
Query: 183 HFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLC 242
+ + ++ M + IVTY ++D +AG + + E +FR M + I P+
Sbjct: 444 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 503
Query: 243 SLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQR 302
+LV Y A + E +L+ + +I D + + ++ + + E K +LE M+ R
Sbjct: 504 ALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Query: 303 GCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
G + V T++ AY G + A F
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNF 591
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 7/299 (2%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C + + F L S + GL ++A M+N P + + L+ K+ V
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTL-PKARSCNFLLHRLSKSGNGQLV 273
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ +DM GI P+ TYN +ID + V+M PDV T N +
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY---MQKYHY 199
+G G ++ + + + + G P I T+N L++ Y K FEKM EY M+
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK---FEKMPRAFEYFSEMKNNGL 390
Query: 200 SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGS 259
+VTY+ +IDAF + G ++ LF MR + P+ T SL+ A AG +
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450
Query: 260 VLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY 318
+L + + + L+ V + L+D + E + V M + G P++ Y +V Y
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK +A E+F++M+ +G N Q +TAL+ Y ++ + A +L+ M + +
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC-NIK 531
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRA-------KM 113
PD+ Y +I ++ + +L +M ++GI N V T+IDAY +A
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591
Query: 114 FAEM-----ELTLV-----------------------KMLSEDCEPDVWTMNCTLRAFGN 145
F EM E T+V +MLS +P+V +
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651
Query: 146 SGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
+ I++ +K +++ Q G+ P I F L+D K G+ ++ ++ M + + +
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
Y ++ F + G+L Q F M + I P V L+R Y G+
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQ 759
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 153/371 (41%), Gaps = 41/371 (11%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
K ++ +A E F M + G N +++ L+ A+ + G+ A L M+ T P+
Sbjct: 371 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT-GLLPNE 429
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+ LI + KA + LL+DM G++ N VTY L+D +A E E
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 124 MLSEDCEPD--VWT----------------------MNCTLRA---------FGNSGQ-- 148
ML + P+ V+T C ++ +G+ Q
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 149 IDTMEKCYEKFQSAGI--QPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
++ + E+ +S GI P I+T ++D+Y KAG + MQ TIVTY
Sbjct: 550 LEETKLILEEMKSRGISANPVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 607
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
++ID +AG ++ F M S ++P+ SL+ E + +
Sbjct: 608 CVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNH 326
+ D F L+D + E ++ M + + D Y ++V +S G +
Sbjct: 668 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 727
Query: 327 AKE-FQDLVEK 336
A++ F +++EK
Sbjct: 728 ARKFFNEMIEK 738
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 135/328 (41%), Gaps = 1/328 (0%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A +L M+ G N ++TALL ++G +A + M P+ Y+ L
Sbjct: 447 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD-GISPNQQVYTAL 505
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ +KA + +L M+ I+P+ + Y ++I + + E +L L +M S
Sbjct: 506 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
+ + A+ +G+ +++ Q G++ +I T+ +L+D KAG E
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD 625
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
M + Y +ID + ++ + LF M+ + P +L+
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 685
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G ++ ++ + I D + LV + + + + M ++G P++V
Sbjct: 686 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEV 745
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
++R Y G + A E ++ +E+M
Sbjct: 746 LCICLLREYYKRGQLDEAIELKNEMERM 773
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 3/150 (2%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK E A + F M+ G N +T+L+ ++ + A L + M+
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ-CRGMT 671
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD+ ++ LI LK + L+S M+ I + Y +L+ + + +
Sbjct: 672 PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 731
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
+M+ + P+ C LR + GQ+D
Sbjct: 732 FNEMIEKGILPEEVLCICLLREYYKRGQLD 761
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 1/305 (0%)
Query: 14 LFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSC 73
+F + G NT SF L+ F +A +L M++ C PD TY+ ++
Sbjct: 184 VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDY-GCPPDNITYNTILDGL 242
Query: 74 LKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDV 133
K ++ + LL DM +G+ PN T+N L+ R E + M PD
Sbjct: 243 CKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDA 302
Query: 134 WTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEY 193
WT N + F G+I + E+ ++ + P + T+N L++ + G E+ ++E
Sbjct: 303 WTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEE 362
Query: 194 MQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGK 253
M+ VTYN+++ F + G + +++ R M P VT +L+ + GK
Sbjct: 363 MEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGK 422
Query: 254 PEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRT 313
++ ++ + + +D V N ++ A R + E +L ++RG D+V+Y T
Sbjct: 423 MDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482
Query: 314 MVRAY 318
++ Y
Sbjct: 483 LIIGY 487
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 7/339 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A + M D GC + ++ +L + G ++A LL MKN P+ T++IL
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNK-GLFPNRTTFNIL 273
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ C + + ++ MS + P+ TYN +I + + AE +M +
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
PDV T N + G + K E+ + G++P+ T+N+++ + K G +++
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M++ IVTYN +I + G + + L M + +K VTL +++RA
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
K ++ +L +D V + L+ Y + + ++ + + M+++ P +
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
TY +M+ G N A ++K+DE + PD
Sbjct: 514 TYNSMIAGLCQMGKTNQA------IDKLDELLESGLVPD 546
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 147/329 (44%), Gaps = 2/329 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A + + M + ++ ++S + + G +A L E M+N PDV TY+
Sbjct: 284 KEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL-KLSPDVVTYNT 342
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI C + + ++ L+ +M +G++PN+VTYN ++ + + E++ T+ KM
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C PD+ T N + G++D + ++ G++ T N +L + + ++
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ ++ Y V+Y +I + + Q L+ M+ + I PS +T S++
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
GK + L + S ++ D + +N ++ Y + + M ++ KPD
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582
Query: 309 VTYRTMVRAYSTNGMKNHA-KEFQDLVEK 336
VT T++ GM A K F + K
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISK 611
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 8/316 (2%)
Query: 34 LSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLK---AFAFDKVQALLSDMS 90
+ AY G +A + MK QP + T + L+ + ++ + + +A+ +D
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRL-GMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFI 189
Query: 91 TQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQID 150
G++ NT ++N LI F E L KM C PD T N L G+++
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249
Query: 151 TMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVI 210
++ G+ P+ TFNIL+ + G ++ + V+E M + TYN++I
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309
Query: 211 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIM 270
F + G + + L M + ++ P VT +L+ G E+ ++ ++ +
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
++V +N +V + + E+ + M++ GC PD VTY T++ + G + A
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429
Query: 331 QDLVE----KMDETCL 342
D + KMD+ L
Sbjct: 430 MDEMGRKGLKMDDVTL 445
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
++ ++AH+L + G + S+ L+ Y + +A L + MK + P + T
Sbjct: 456 RKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK-EIIPSIIT 514
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
Y+ +I + ++ L ++ G+ P+ +TYNT+I Y + + KM+
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++ +PDV T N L G ++ K + + S G ++N ++ S K F
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
+ ++E M++ TYN ++ AG +K E
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAE 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
+GK Q A + +++ G + ++ ++ Y + G +KAF M + +P
Sbjct: 525 MGKTNQ---AIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK-NFKP 580
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
DV T + L+ K +K L + ++G + V+YNT+I + + K F E L
Sbjct: 581 DVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
+M + PD +T N L ++G++ E+ K G
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 14/330 (4%)
Query: 14 LFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
L + M+ G + N+ + +LS ++G D+A SL MK PD+ YSI+I
Sbjct: 362 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK-ADGLSPDLVAYSIVIHG 420
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K FD L +M + I PN+ T+ L+ + M E L ++S D
Sbjct: 421 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 480
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + SG I+ + ++ GI PS+ TFN L+ Y K + + +++
Sbjct: 481 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 540
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ Y + ++V+Y ++DA+ G+ K ++ L R M++E I P+ VT + +
Sbjct: 541 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 600
Query: 253 KPEKLGSVLRF------------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
K E VLR +++ I D + +N ++ R+K + LE+M+
Sbjct: 601 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 660
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
R TY ++ + G A F
Sbjct: 661 SRNLDASSATYNILIDSLCVYGYIRKADSF 690
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCD--ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q + + E D + SF +++S Y + G D A S +
Sbjct: 209 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLV 267
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ILI + + L SDM+ G+ P++VTYN L + M +
Sbjct: 268 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 327
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYG 179
+ ML + PDV T L G ID + S G + SI +++L
Sbjct: 328 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 387
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ ++ M+ S +V Y+IVI + G +L+ M +RI P+
Sbjct: 388 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 447
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G + S+L + +S LD V +N ++D Y + C E + +V+
Sbjct: 448 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 507
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ G P T+ +++ Y A++ D+++
Sbjct: 508 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 543
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 138/331 (41%), Gaps = 15/331 (4%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C++ +A L +++ G + + ++ Y +SG ++A L + + T
Sbjct: 453 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET-G 511
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P V T++ LI K + + +L + G+ P+ V+Y TL+DAY ++
Sbjct: 512 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 571
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----MEKCYEK-------FQSAGIQP 166
+M +E P T + + + + E+ +EK +S GI P
Sbjct: 572 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 631
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
T+N ++ + H +E M+ + + TYNI+ID+ G +++ +
Sbjct: 632 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 691
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
++ + + S +L++A+ G PE + + + + ++ +++ R
Sbjct: 692 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 751
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
E K +M +G PD M+++
Sbjct: 752 HLVNESKFFFCLMLSQGISPDLDICEVMIKS 782
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N TY+T++D R + + L L +D P V + N + + G +D + +
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G+ PS+ + NIL++ G + + M K+ VTYNI+ F
Sbjct: 259 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 318
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL------RFIDNSDIM 270
G + + R M + + P +T L+ G + +G VL R + + I+
Sbjct: 319 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID-MGLVLLKDMLSRGFELNSII 377
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+V + L GR+ E + M+ G PD V Y ++
Sbjct: 378 PCSVMLSGLCKT-GRID---EALSLFNQMKADGLSPDLVAYSIVIHG 420
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 8/333 (2%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ GC + ++T LL A +S F +A +L+ M+ C P++ TY+++
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVI 252
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + D + L+ +S+ G +P+TV+Y T++ AK + ++E +M+ ++C
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T + +R F G ++ + E+ G + NI++++ K G +
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 372
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M Y S ++Y V+ RA + + L + M + P+ VT + +
Sbjct: 373 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 432
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCF-AEMKGVLEVMQQRGCKPDK 308
G E+ ++ + ++ V +N LV+ + C + LE+ CKP+
Sbjct: 433 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF----CVQGRVDSALELFYSMPCKPNT 488
Query: 309 VTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+TY T++ + A E L E + + C
Sbjct: 489 ITYTTLLTGLCNAERLDAAAEL--LAEMLQKDC 519
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 4/322 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ++ + M GC ANT +++ + G D AF L +M + C PD +Y+
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY-GCSPDTISYTT 391
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K +A ++ + LL +M + PN VT+NT I + + + + + +M
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CE ++ T N + F G++D+ E F S +P+ T+ LL A + +
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 508
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + + +VT+N+++ F + G + + L M P+ +T +L+
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
E+ +L + ++ + D V ++ ++ R E + ++Q G +P
Sbjct: 569 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 628
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
V Y ++ A + A +F
Sbjct: 629 VIYNKILLALCKRCNTDGAIDF 650
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +A G + ++ L++ Y R G D A L+ M PD TY+ +I
Sbjct: 128 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 183
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + +LL DM +G +P+ VTY L++A ++ F + L +M ++ C
Sbjct: 184 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 243
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + G++D + + S G QP ++ +L A +E + +
Sbjct: 244 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 303
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + VT+++++ F R G +++ + M + TLC++V
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN-TTLCNIV--INT 360
Query: 251 AGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
K ++ +F++N DT+ + ++ R + + + K +L+ M ++ C P+
Sbjct: 361 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 420
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+VT+ T + G+ A L+E+M E
Sbjct: 421 EVTFNTFICILCQKGLIEQATM---LIEQMSE 449
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 50/355 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ E A EL + MV + C N +F + + GL ++A L+E M C+
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH-GCEV 454
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ L+ C++ +V + L + +PNT+TY TL+ A+
Sbjct: 455 NIVTYNALVNGFCVQG----RVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 510
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML +DC P+V T N + F G +D + E+ G P++ T+N LLD K
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E+ ++ + S IVTY+ +I R +++ +F +++ ++P V
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 630
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ A N+D +D FF AY M
Sbjct: 631 YNKILLALCKRC-------------NTDGAID--FF-----AY---------------MV 655
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK------MDETCLAMKRPDF 349
GC P+++TY T++ + ++ KE +DL+ + +++ L RP F
Sbjct: 656 SNGCMPNELTYITLIEGLAN---EDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 707
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV + LI++ + +L G + YNTL+ Y R + +++
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR---YGQLDAA 163
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ S PD +T +R + G++ + G QPS+ T+ +LL++ K
Sbjct: 164 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ F + V++ M+ + IVTYN++I+ R G + + S +P V+
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++++ A + E + + + + M + V F+ LV + R VLE M
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC + ++ G + A +F
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQF 373
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 11/327 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK+ L Q M G ++ +L Y + G F A LL+HMK + DV TY++
Sbjct: 210 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK-SKGVDADVCTYNM 268
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI ++ K LL DM + I PN VTYNTLI+ + L +MLS
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T N + + G K + ++ G+ PS ++ +LLD K F+
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M++ +TY +ID + G L + L M + I P VT +L+ +
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 249 GHAGK----PEKLGSVLRF-IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
G+ E + + R + + I+ T+ +NC R+ C E + E M G
Sbjct: 449 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC-----RMGCLKEAIRIYEAMILEG 503
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D T+ +V + G A+EF
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 18/330 (5%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A L M +G D + +++AL++ + + G F A ++ +
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLS 470
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ YS LI +C + + + M +G + T+N L+ + +A AE E
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M S+ P+ + +C + +GNSG+ +++ G P+ T+ LL K
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH + ++ + + V YN ++ A ++G+L + LF M I P T
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFI------DNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
SL+ GK +V+ + +++ + V + C VD G K G
Sbjct: 651 YTSLISGLCRKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVD--GMFKAGQWKAG 703
Query: 295 VL--EVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ E M G PD VT M+ YS G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C + + Y ILI+ L+ + M G P+ T N ++ + ++ +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +ML PDV T N + G + +K + +G P+I T+N +L Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G F+ ++++M+ + TYN++I R+ + + L R MR I P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ + + GK +L + + + + V FN L+D + F E + +
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ +G P +V+Y ++ N + A+ F
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 36/347 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M+ G N +F AL+ + G F +A + +M P +Y +L+
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLL 375
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K FD + M G+ +TY +ID + E + L +M + +
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T + + F G+ T ++ + G+ P+ ++ L+ + + G ++ +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M ++ T+N+++ + +AG + + E R M S+ I P+ V+ L+ YG+
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 251 AGKPEKLGSV-----------------------------------LRFIDNSDIMLDTVF 275
+G+ K SV L+ + +DTV
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N L+ A + A+ + M QR PD TY +++ G
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 139/346 (40%), Gaps = 5/346 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A E + M +G NT SF L++ YG SG KAFS+ + M P
Sbjct: 518 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HP 576
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY L+K K + + L + +TV YNTL+ A ++ A+
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQ-IDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+M+ PD +T + G+ + + E + P+ + +D K
Sbjct: 637 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 696
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
AG ++ E M ++ IVT N +ID + R G +++ L M ++ P+ T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
L+ Y + R I + I+ D + + LV +L+
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKR 346
RG + D+ T+ ++ NG N A DLV+ M +++ +
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWA---FDLVKVMTSLGISLDK 859
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 1/305 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C++N + L+ Y R G+ + + M P V T + ++ S +K+ V
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSV 177
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ L +M + I P+ T+N LI+ F + + KM P + T N L
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G+ + + +S G+ + T+N+L+ ++ K ++ M+K
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VTYN +I+ F G + L M S + P+ VT +L+ + G ++ +
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ + V + L+D + F +G M++ G ++TY M+ NG
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 323 MKNHA 327
+ A
Sbjct: 418 FLDEA 422
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 4/315 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
KA F+ +D G + + A++ Y R G +K LL M N + P++ TY+I
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNI 759
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
L+ K L + GI P+ +T ++L+ + M E+ L ++K +
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML-EIGLKILKAFICR 818
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
E D +T N + +G+I+ + S GI +T + ++ + F++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M K S Y +I+ R GD+K + M + +I P V ++VRA
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GK ++ +LRF+ ++ F L+ + E + VM G K D
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 308 KVTYRTMVRAYSTNG 322
V+Y ++ G
Sbjct: 999 LVSYNVLITGLCAKG 1013
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ E ++ +A + G + + +F L+S +G + AF L++ M +
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM-TSLG 854
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
D +T ++ + F + + +L +MS QGI P + Y LI+ R
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 119 LTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +M++ C P+V + +RA G+ D + P+I +F L+
Sbjct: 915 VVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G+ + + M +V+YN++I GD+ L+ M+ + +
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 238 CVTLCSLVRA 247
T +L+R
Sbjct: 1034 ATTYKALIRG 1043
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 121/328 (36%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF MV ++ ++T+L+S R G A + + + P+ Y+
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA + M G P+ VT N +ID Y R + L +M +++
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L + + T Y GI P T + L+ ++ E
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ T+N++I G++ L ++M S I T ++V
Sbjct: 811 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ ++ VL + I ++ + L++ R+ V E M P V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MVRA + G + A + KM
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKM 958
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+I+I + R G ++ +FRLM PS T +++ + +G+ + S L+ +
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
I D FN L++ F + +++ M++ G P VTY T++ Y G
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 325 NHAKEFQD 332
A E D
Sbjct: 245 KAAIELLD 252
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 11/326 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E H L + MV +G + + T L+ + KA ++E ++ QPDV Y+
Sbjct: 107 ESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG--QPDVFAYNA 163
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSE 127
LI K D +L M ++ P+TVTYN +I + R K+ +++ L ++LS+
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV-LNQLLSD 222
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C+P V T + A G +D K ++ S G++P + T+N ++ K G ++
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ ++ +++YNI++ A G ++ E L M SE+ P+ VT L+
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGC 304
GK E+ ++L+ + + D ++ L+ A+ GRL E LE M GC
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF---LETMISDGC 399
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD V Y T++ NG + A E
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEI 425
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L M+ G + ++ ++ + G+ D+AF ++ +++ C+PDV +Y+I
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE-LKGCEPDVISYNI 303
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ L +++ + L++ M ++ PN VTY+ LI R E + L+K++ E
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE-AMNLLKLMKEK 362
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD ++ + + AF G++D + E S G P I +N +L + K G ++
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + + S +YN + A +GD + ++ M S I P +T S++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G ++ +L + + + V +N ++ + + + VLE M GC+P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
+ TY ++ G + A E + + ++D
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 8/287 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D I +SC + + LL M +G P+ + LI + + + + +
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPK-AVRV 146
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++L + +PDV+ N + F +ID + ++ +S P T+NI++ S
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V+ + + T++TY I+I+A G + + L M S +KP T
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++R G ++ ++R ++ D + +N L+ A + E + ++ M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C P+ VTY ++ +G +E +L++ M E L PD
Sbjct: 327 EKCDPNVVTYSILITTLCRDG---KIEEAMNLLKLMKEKGLT---PD 367
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQ 60
L K + ++A E+F + + GC N+ S+ + SA SG +A +LE M N D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID-- 470
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ +I + D+ LL DM + P+ VTYN ++ + +A +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSG 147
L M+ C P+ T + G +G
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAG 557
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 32/360 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+CK+ + M+ EGC + + F +L+ AY RSG + A+ LL+ M + CQP
Sbjct: 350 LGRCKR------ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC-GCQP 402
Query: 62 DVNTYSILIKSCLKAFAFDKVQAL------LSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
Y+ILI + L +M + N V + L A F
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + +M+S+ PD T + + N+ ++D +E+ +S + P + T+ IL+
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILI 522
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
DS+ K G ++ + M + + +VTY +I A+ +A + LF +M SE
Sbjct: 523 DSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSV--------------LRF-IDNSDIMLDTVF-FNCL 279
P+ VT +L+ + +G+ EK + + F ID+ +I +F + L
Sbjct: 583 PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGAL 642
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
VD + E + +L+VM GC+P+ + Y ++ + G + A Q + KM E
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA---QMVFTKMSE 699
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 160/378 (42%), Gaps = 58/378 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA+ + + M+ +G +T +++ ++ + D AF L E MK+ PDV TY+I
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN-HVVPDVFTYTI 520
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K + + +M G PN VTY LI AY +A+ + MLSE
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGI---------------QPSINTFN 172
C P+V T + SGQI+ + Y + + +A I P+I T+
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF------ 226
L+D KA ++ +++ M + Y+ +ID F + G L + + +F
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 227 --------------RLMRSERI---------------KPSCVTLCSLVRAYGHAGKPEKL 257
RL + +R+ P+ + ++ GK ++
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTM 314
++ ++ + V + ++D +G+ ++ LE+M+Q +GC P+ VTYR +
Sbjct: 761 YRLMSMMEEKGCHPNVVTYTAMIDGFGKA---GKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 315 VRAYSTNGMKNHAKEFQD 332
+ G+ + A + D
Sbjct: 818 INHCCAAGLLDDAHQLLD 835
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 147/343 (42%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC---- 59
K ++ A+ELF+ M+ EGC N ++TAL+ + +SG +KA + M+ D
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621
Query: 60 -----------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
P++ TY L+ KA + + LL MS +G PN + Y+ LID +
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ E ++ KM P+V+T + + ++D K + P++
Sbjct: 682 CKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNV 741
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++D K G ++ +M M++ +VTY +ID FG+AG + + L R
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M ++ P+ VT L+ AG + +L + + + +++ + R
Sbjct: 802 MGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE-- 859
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+L+ + + P YR ++ ++ G A E
Sbjct: 860 FIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELH 902
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 143/344 (41%), Gaps = 17/344 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M+D N + + L +G F+KA+S++ M + PD +TYS
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM-SKGFIPDTSTYSK 485
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A D L +M + + P+ TY LID++ + + + +M+ +
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T + A+ + ++ + + +E S G P++ T+ L+D + K+G EK
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 189 AVMEYMQKYH----------------YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+ M+ I TY ++D +A +K+ L +M E
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+P+ + +L+ + GK ++ V + + ++ L+D + K
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
VL M + C P+ + Y M+ G + A ++E+
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 18/343 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A+ + + M D G + + + + ++G + +A +L+E + + D Y+
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE----KEEFKLDTVIYTQ 304
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +A F++ LS M + PN VTY L+ R + + L M++E
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P N + A+ SG K +K G QP +NIL+ G G+ EK+
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGN-EKLP 421
Query: 189 A--VMEYMQKYH---YSWTIVTYNIVIDAFGR----AGDLKQMEYLFRLMRSERIKPSCV 239
+ V+E +K + +V + + R AG ++ + R M S+ P
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++ +A K + + + ++ ++ D + L+D++ ++ + + + M
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ GC P+ VTY ++ AY + A E +++ + E C+
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM--LSEGCI 582
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 34/263 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +L M EGC+ N + AL+ + + G D+A + M P
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGP 704
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS LI K D +LS M PN + Y +ID + E +
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C P+V T + FG +G++D + + + G P+ T+ +L++ A
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824
Query: 182 GHFEKMSAVMEYMQKYHYSW---------------------------------TIVTYNI 208
G + +++ M++ ++ I Y I
Sbjct: 825 GLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRI 884
Query: 209 VIDAFGRAGDLKQMEYLFRLMRS 231
+ID+F +AG L+ L + M S
Sbjct: 885 LIDSFCKAGRLELALELHKEMSS 907
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 48/260 (18%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++LI+ C + ++ L + G +P+ +TYN L+
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALV--------------------- 239
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
R F + ++DT + + +G T + KAG + +
Sbjct: 240 --------------RVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWRE 285
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVT----L 241
A++E K + V Y +I A ++ M++L R MRS P+ VT L
Sbjct: 286 ALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSR-MRSSSCIPNVVTYRILL 341
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
C +R G+ ++ +L + FN L+ AY R ++ +L+ M
Sbjct: 342 CGCLRKR-QLGRCKR---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD 397
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
GC+P V Y ++ N
Sbjct: 398 CGCQPGYVVYNILIGGICGN 417
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 6/240 (2%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
Y+ L++ G E L ++ ED E +N +R +G + + +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ G +PS T+N L+ + +A + V M ++ T + +AG
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L+ E K V ++ A E+ L + +S + + V + L
Sbjct: 284 REA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ R + K +L +M GC P + + +++ AY +G ++A + L++KM +
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK---LLKKMGD 397
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 14/330 (4%)
Query: 14 LFQAMVDEGCDANTQ-SFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKS 72
L + M+ G + N+ + +LS ++G D+A SL MK PD+ YSI+I
Sbjct: 391 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK-ADGLSPDLVAYSIVIHG 449
Query: 73 CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPD 132
K FD L +M + I PN+ T+ L+ + M E L ++S D
Sbjct: 450 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 509
Query: 133 VWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVME 192
+ N + + SG I+ + ++ GI PS+ TFN L+ Y K + + +++
Sbjct: 510 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 569
Query: 193 YMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAG 252
++ Y + ++V+Y ++DA+ G+ K ++ L R M++E I P+ VT + +
Sbjct: 570 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 629
Query: 253 KPEKLGSVLRF------------IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
K E VLR +++ I D + +N ++ R+K + LE+M+
Sbjct: 630 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 689
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
R TY ++ + G A F
Sbjct: 690 SRNLDASSATYNILIDSLCVYGYIRKADSF 719
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 3 GKCKQPEKAHELFQAMVDEGCD--ANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q + + E D + SF +++S Y + G D A S +
Sbjct: 238 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLV 296
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P V +++ILI + + L SDM+ G+ P++VTYN L + M +
Sbjct: 297 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 356
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQ-PSINTFNILLDSYG 179
+ ML + PDV T L G ID + S G + SI +++L
Sbjct: 357 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 416
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
K G ++ ++ M+ S +V Y+IVI + G +L+ M +RI P+
Sbjct: 417 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 476
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T +L+ G + S+L + +S LD V +N ++D Y + C E + +V+
Sbjct: 477 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 536
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVE 335
+ G P T+ +++ Y A++ D+++
Sbjct: 537 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 572
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 138/331 (41%), Gaps = 15/331 (4%)
Query: 1 MLGKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C++ +A L +++ G + + ++ Y +SG ++A L + + T
Sbjct: 482 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET-G 540
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
P V T++ LI K + + +L + G+ P+ V+Y TL+DAY ++
Sbjct: 541 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 600
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDT-----MEKCYEK-------FQSAGIQP 166
+M +E P T + + + + E+ +EK +S GI P
Sbjct: 601 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 660
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
T+N ++ + H +E M+ + + TYNI+ID+ G +++ +
Sbjct: 661 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 720
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
++ + + S +L++A+ G PE + + + + ++ +++ R
Sbjct: 721 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 780
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
E K +M +G PD M+++
Sbjct: 781 HLVNESKFFFCLMLSQGISPDLDICEVMIKS 811
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
Query: 97 NTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCY 156
N TY+T++D R + + L L +D P V + N + + G +D + +
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 157 EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRA 216
G+ PS+ + NIL++ G + + M K+ VTYNI+ F
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347
Query: 217 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVL------RFIDNSDIM 270
G + + R M + + P +T L+ G + +G VL R + + I+
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID-MGLVLLKDMLSRGFELNSII 406
Query: 271 LDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRA 317
+V + L GR+ E + M+ G PD V Y ++
Sbjct: 407 PCSVMLSGLCKT-GRID---EALSLFNQMKADGLSPDLVAYSIVIHG 449
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 144/324 (44%), Gaps = 5/324 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD--CQPDVNTY 66
++A +L M D+GC + ++ +L+ + G + A +E +KN P C+P+ +Y
Sbjct: 218 KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDA---MEFLKNLPSYGCEPNTVSY 274
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+I++K A ++ + L+ +M+ +G PN VT+N LI R + L +M
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
C P+ + N L AF +I + E S G P I ++N LL + + G +
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ ++ S +++YN VID +AG K+ L M S+ ++P +T ++
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
+ E+ + + I +N ++ + + + M GC P
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEF 330
++ TY +V + G+ A+E
Sbjct: 515 NESTYTILVEGLAYEGLVKEAREL 538
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 1/297 (0%)
Query: 18 MVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAF 77
+ D + + ++ L+ G A ++LE M C PDV TY+IL+++ K
Sbjct: 157 VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRR-GCLPDVVTYTILLEATCKRS 215
Query: 78 AFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMN 137
+ + LL +M +G P+ VTYN +++ + + L + S CEP+ + N
Sbjct: 216 GYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYN 275
Query: 138 CTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKY 197
L+ + + + EK E+ G P++ TFN+L+ + G E V+E M +Y
Sbjct: 276 IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQY 335
Query: 198 HYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKL 257
+ ++YN ++ AF + + + LM S P V+ +L+ A G+ +
Sbjct: 336 GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 395
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTM 314
+L + + + +N ++D + E +L+ M +G +PD +TY T+
Sbjct: 396 IELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI 452
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 10/306 (3%)
Query: 30 FTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDM 89
+ A+++ Y +G D A L+ M +PD TY+ LI+ A+L DM
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMP----VEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 90 STQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQI 149
+G P+ VTY L++A + + + L +M + C PD+ T N L G++
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252
Query: 150 DTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIV 209
+ + + S G +P+ ++NI+L A +E +ME M +VT+N++
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312
Query: 210 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDI 269
I R G ++ + M P+ ++ L+ A+ K K + + +
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372
Query: 270 MLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTMVRAYSTNGMKNH 326
D V +N L+ A R E+ +E++ Q +GC P ++Y T++ + G
Sbjct: 373 YPDIVSYNTLLTALCR---NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429
Query: 327 AKEFQD 332
A E D
Sbjct: 430 ALELLD 435
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMEL 119
PDV Y+ ++ A D + L++DM + P+ TYNTLI GR + + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 120 TLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYG 179
L M C PDV T L A K ++ G P I T+N++L+
Sbjct: 189 -LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 180 KAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCV 239
+ G E ++ + Y V+YNIV+ A + E L M + P+ V
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T L+ G E VL + +++ +N L+ A+ + K + +E+M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
RGC PD V+Y T++ A NG + A E
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 5 CKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 62
CKQ + KA E + MV GC + S+ LL+A R+G D A LL +K+ C P
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK-GCSPV 410
Query: 63 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 122
+ +Y+ +I KA + LL +M+++G++P+ +TY+T+ R E T
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470
Query: 123 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 182
K+ P N L + + S+G P+ +T+ IL++ G
Sbjct: 471 KVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEG 530
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 12/335 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ GC + ++T LL A +S F +A +L+ M+ C P++ TY+++
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVI 221
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + D + L+ +S+ G +P+TV+Y T++ AK + ++E +M+ ++C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T + +R F G ++ + E+ G + NI++++ K G +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M Y S ++Y V+ RA + + L + M + P+ VT + +
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKP 306
G E+ ++ + ++ V +N LV+ + GR+ LE+ CKP
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV------DSALELFYSMPCKP 455
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ +TY T++ + A E L E + + C
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAEL--LAEMLQKDC 488
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 144/322 (44%), Gaps = 4/322 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ++ + M GC ANT +++ + G D AF L +M + C PD +Y+
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM-GSYGCSPDTISYTT 360
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K +A ++ + LL +M + PN VT+NT I + + + + + +M
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CE ++ T N + F G++D+ E F S +P+ T+ LL A + +
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + + +VT+N+++ F + G + + L M P+ +T +L+
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
+ E+ +L + ++ + D V ++ ++ R E + ++Q G +P
Sbjct: 538 TNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
V Y ++ A + A +F
Sbjct: 598 VIYNKILLALCKRCNTDGAIDF 619
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +A G + ++ L++ Y R G D A L+ M PD TY+ +I
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + +LL DM +G +P+ VTY L++A ++ F + L +M ++ C
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + G++D + + S G QP ++ +L A +E + +
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + VT+++++ F R G +++ + M + TLC++V
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN-TTLCNIV--INT 329
Query: 251 AGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
K ++ +F++N DT+ + ++ R + + + K +L+ M ++ C P+
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+VT+ T + G+ A L+E+M E
Sbjct: 390 EVTFNTFICILCQKGLIEQATM---LIEQMSE 418
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 39/325 (12%)
Query: 6 KQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNT 65
K+ E ELF M+++ C N +F L+ + R G+ ++A +LE M C +
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTL 322
Query: 66 YSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+I+I + K D L++M + G P+T++Y T++ RA+ + + + L +M+
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
++C P+ + + NTF +L + G E
Sbjct: 383 RKNCPPN--------------------------------EVTFNTFICIL---CQKGLIE 407
Query: 186 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 245
+ + ++E M ++ IVTYN +++ F G + LF M KP+ +T +L+
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLL 464
Query: 246 RAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCK 305
+A + + +L + D + V FN LV + + E ++E M + GC
Sbjct: 465 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 524
Query: 306 PDKVTYRTMVRAYSTNGMKNHAKEF 330
P+ +TY T++ + + A E
Sbjct: 525 PNLITYNTLLDGITNDCNSEEALEL 549
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 50/355 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ E A EL + MV + C N +F + + GL ++A L+E M C+
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH-GCEV 423
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ L+ C++ +V + L + +PNT+TY TL+ A+
Sbjct: 424 NIVTYNALVNGFCVQG----RVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 479
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML +DC P+V T N + F G +D + E+ G P++ T+N LLD
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E+ ++ + S IVTY+ +I R +++ +F +++ ++P V
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ A N+D +D FF AY M
Sbjct: 600 YNKILLALCKRC-------------NTDGAID--FF-----AY---------------MV 624
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK------MDETCLAMKRPDF 349
GC P+++TY T++ + ++ KE +DL+ + +++ L RP F
Sbjct: 625 SNGCMPNELTYITLIEGLAN---EDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 676
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV + LI++ + +L G + YNTL+ Y R + +++
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR---YGQLDAA 132
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ S PD +T +R + G++ + G QPS+ T+ +LL++ K
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ F + V++ M+ + IVTYN++I+ R G + + S +P V+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++++ A + E + + + + M + V F+ LV + R VLE M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC + ++ G + A +F
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQF 342
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 1 MLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHM-KNTPDC 59
M GK + E++ LF+ M+ +GC N ++ ++ A +SG+ DKA L +M KN +C
Sbjct: 313 MTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKN--NC 370
Query: 60 QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTV-------------------- 99
+P+ TYSI++ + ++ +L ++S + I +
Sbjct: 371 RPNEFTYSIILNVLVAEGQLGRLDEVL-EVSNKFINKSIYAYLVRTLSKLGHSSEAHRLF 429
Query: 100 -------------TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNS 146
Y +++++ R E L K+ + D N L G
Sbjct: 430 CNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKL 489
Query: 147 GQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTY 206
Q+ + YEK + G P I T+NIL+ S G+ G ++ V E ++ I++Y
Sbjct: 490 KQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISY 549
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N +I+ G+ GD+ + F M+ + + P VT +L+ +G K E S+ +
Sbjct: 550 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT 609
Query: 267 SDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
+ V +N L+D R AE + ++++G PD +TY + R S + K
Sbjct: 610 QGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRK 667
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 39/335 (11%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDV 63
+ + ++A ++ M G + ++ LL A + D+++ + + MK C PD
Sbjct: 246 RSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMK-LKHCNPDE 304
Query: 64 NTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK 123
TY+I+I+ K ++ AL +M T+G PN + YNT+I A ++ M + L
Sbjct: 305 YTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCN 364
Query: 124 MLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGH 183
M+ +C P+ +T + L GQ+ +++ E + I SI + L+ + K GH
Sbjct: 365 MIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-VSNKFINKSIYAY--LVRTLSKLGH 421
Query: 184 FEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCS 243
+ + M +H D R + +E L R
Sbjct: 422 SSEAHRLFCNMWSFH------------DGGDRDAYISMLESLCR---------------- 453
Query: 244 LVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
GK + +L + I DT+ +N ++ G+LK + + + E M+Q G
Sbjct: 454 -------GGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG 506
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMD 338
PD TY ++ + G A E + +E D
Sbjct: 507 PFPDIFTYNILISSLGRVGKVKEAVEVFEELESSD 541
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 18/258 (6%)
Query: 79 FDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNC 138
D+V+ +LS M IR T N LI + + ++EL + D + +T C
Sbjct: 183 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNE---DLELCTGLIKKWDLRLNAYTYRC 239
Query: 139 TLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYH 198
L+A S D Y + S G Q I +N+LLD+ K ++ V + M+ H
Sbjct: 240 LLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKH 299
Query: 199 YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLG 258
+ TY I+I G+ G ++ LF M ++ P+ + ++++A +G +K
Sbjct: 300 CNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDK-- 357
Query: 259 SVLRF---IDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYR 312
++L F I N+ + ++ N LV A G+L + VLEV + +K Y
Sbjct: 358 AILLFCNMIKNNCRPNEFTYSIILNVLV-AEGQL---GRLDEVLEVSNKF---INKSIYA 410
Query: 313 TMVRAYSTNGMKNHAKEF 330
+VR S G + A
Sbjct: 411 YLVRTLSKLGHSSEAHRL 428
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 37/363 (10%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA E+++ M + G ++ LL +Y + G + LL M+ C P+ TY++L
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR-GCAPNDVTYNVL 275
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I K F++ + L+ +M G++ + TYN LI Y M AE +M+ +
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P V T N + G++ + + + P + ++N L+ Y + G+ K
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR--- 246
+ + ++ + TIVTYN ++D R G+L+ + L M +E I P VT LV
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 247 -----------------------AYGHAGK---PEKLGSVLRFIDNSDIML------DTV 274
+Y +A + KLG R + ML D +
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515
Query: 275 FFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKE-FQDL 333
+N +VD +L E +L+ M G PD VTY +++ A+ NG +E F ++
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575
Query: 334 VEK 336
+ K
Sbjct: 576 LSK 578
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + E+A L M+ G + ++ L+ Y G+ +A SL E M P
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV-LKGASP 337
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
V TY+ I K LSDM + P+ V+YNTLI Y R + L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNIL------- 174
++ S P + T N L G+++ ++ + + GI P I T+ IL
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 175 -------------------LDSYG---------KAGHFEKMSAVMEYMQKYHYSWTIVTY 206
LDSY K G + ++ E M + ++ Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 207 NIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDN 266
N+V+D + G+L++ L + M S+ + P VT S++ A+ G+ K + + +
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 267 SDIMLDTVFFNCLVDAY---GRLK----CFAEMKGVLEVMQQRGCKPDKVTYRTMVRAY- 318
+ V + L+ + GRL+ F+EM Q++G P+ +TY +++
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM-------QEKGILPNVITYNSLINGLC 630
Query: 319 STNGMKNHAKEFQDLVEK 336
M F ++VEK
Sbjct: 631 KVRRMDQAYNFFAEMVEK 648
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 123/285 (43%), Gaps = 3/285 (1%)
Query: 3 GKCKQPE--KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G C+Q E A +L M++EG + ++T L++ + G A + M + +
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE-GLE 476
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
D Y+ I LK + +L +M +G P+ + YN ++D + E
Sbjct: 477 LDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL 536
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L KM+S+ PD T + A +G++ + + + S G+ PS+ T+ +L+ +
Sbjct: 537 LQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAG 596
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
G E+ MQ+ ++TYN +I+ + + Q F M + I P+ +
Sbjct: 597 KGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYS 656
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGR 285
L+ + G ++ S+ + + + + D+ + L+ G+
Sbjct: 657 YTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 23/312 (7%)
Query: 8 PEKAHELFQ-AMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
P A LF+ A G + F A+L ++ L A+ ++E + N +
Sbjct: 95 PRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR----IV 150
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
+LI C+ + K+ LL I Y + M + KM+
Sbjct: 151 DVLIGGCVSSEVSVKILDLL------------------IWVYSKKSMVEQCLSVFDKMIK 192
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
PDV N LR + + + Y GI+P+I T+N LLDSY K G ++
Sbjct: 193 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQ 252
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVR 246
++ MQ+ + VTYN++I+ + G+ +Q + L M +K S T L+
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312
Query: 247 AYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKP 306
Y + G + S+ + +N + +L ++ L M P
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 307 DKVTYRTMVRAY 318
D V+Y T++ Y
Sbjct: 373 DVVSYNTLIYGY 384
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 167 SINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF 226
S+ ++L+ Y K E+ +V + M K S + N ++ + + ++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 227 RLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRL 286
R M IKP+ VT +L+ +Y GK ++ +L + + V +N L++ +
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 287 KCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQD 332
F + KG++ M + G K TY ++ Y GM A Q+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 1/206 (0%)
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
E V ++ + + ++ ++K + + P + N +L K
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
V M ++ TIVTYN ++D++ + G ++Q L M+ P+ VT L+
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
G+ E+ ++ + + + + +N L+ Y AE + E M +G P
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340
Query: 310 TYRTMVRAYSTNG-MKNHAKEFQDLV 334
TY + + G M + ++ D++
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDML 366
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K ++ ++A+ F MV++G N S+T L++ G + +A SL + M + QP
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR-GVQP 687
Query: 62 DVNTYSILIKSCLK 75
D T+S L+K K
Sbjct: 688 DSCTHSALLKQLGK 701
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 11/326 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E H L + MV +G + + T L+ + KA ++E ++ QPDV Y+
Sbjct: 103 ESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG--QPDVFAYNA 159
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY-GRAKMFAEMELTLVKMLSE 127
LI K D +L M ++ P+TVTYN +I + R K+ +++ L ++LS+
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV-LDQLLSD 218
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
+C+P V T + A G +D K ++ S G++P + T+N ++ K G ++
Sbjct: 219 NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 278
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
++ ++ +++YNI++ A G ++ E L M SE+ P+ VT L+
Sbjct: 279 FEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 338
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGC 304
GK E+ ++L+ + + D ++ L+ A+ GRL E LE M GC
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF---LETMISDGC 395
Query: 305 KPDKVTYRTMVRAYSTNGMKNHAKEF 330
PD V Y T++ NG + A E
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEI 421
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 154/328 (46%), Gaps = 4/328 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
++A +L M+ G + ++ ++ + G+ D+AF ++ +++ C+PDV +Y+I
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLE-LKGCEPDVISYNI 299
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
L+++ L +++ + L++ M ++ PN VTY+ LI R E + L+K++ E
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE-AMNLLKLMKEK 358
Query: 129 -CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
PD ++ + + AF G++D + E S G P I +N +L + K G ++
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
+ + + S +YN + A +GD + ++ M S I P +T S++
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
G +K +L + + + V +N ++ + + + VL+ M GC+P+
Sbjct: 479 LCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPN 538
Query: 308 KVTYRTMVRAYSTNGMKNHAKEF-QDLV 334
+ TY ++ G + A E DLV
Sbjct: 539 ETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 8/287 (2%)
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
D I +SC + + LL M +G P+ + LI + + + + +
Sbjct: 85 DTQMLKIFHRSCRSGNYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNVPK-AVRV 142
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
+++L + +PDV+ N + F +ID + ++ +S P T+NI++ S
Sbjct: 143 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Query: 182 GHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 241
G + V++ + + T++TY I+I+A G + + L M S +KP T
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
+++R G ++ ++R ++ D + +N L+ A + E + ++ M
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 348
C P+ VTY ++ +G +E +L++ M E L PD
Sbjct: 323 EKCDPNVVTYSILITTLCRDG---KIEEAMNLLKLMKEKGLT---PD 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFS-LLEHMKNTPDCQ 60
L K + ++A E+F + + GC N+ S+ + SA SG +A +LE + N D
Sbjct: 409 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGID-- 466
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PD TY+ +I + DK LL DM + P+ VTYN ++ + +A +
Sbjct: 467 PDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDV 526
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSG 147
L M+ C P+ T + G +G
Sbjct: 527 LDSMVGNGCRPNETTYTVLIEGIGFAG 553
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 8/329 (2%)
Query: 7 QPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTY 66
+P +A F +M + G + SF LL +S + A LL +K+ +PD +Y
Sbjct: 151 KPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR--FRPDTVSY 208
Query: 67 SILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKML 125
+IL CLK ++ +L +M +GI P VTYNT++ Y R+ E ++M
Sbjct: 209 NILANGYCLKKRTPMALR-VLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMK 267
Query: 126 SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFE 185
CE DV + + FG +G++ ++ +++ G+ P++ T+N L+ + K +
Sbjct: 268 KRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQ 327
Query: 186 KMSAVMEYMQKYHY-SWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSL 244
AV E M + S +VT+N+VI GD+++ M ++ S T +
Sbjct: 328 NAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVV 387
Query: 245 VRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDA-YGRLKC--FAEMKGVLEVMQQ 301
+R + AG+ EK V + + + + +N L+ A + R K +L M +
Sbjct: 388 IRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVE 447
Query: 302 RGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
RG P K T+ ++ G ++ AK+
Sbjct: 448 RGFLPRKFTFNRVLNGLVITGNQDFAKDI 476
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 120/300 (40%), Gaps = 6/300 (2%)
Query: 45 KAFSLLEHM-KNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNT 103
KA +H+ ++ P +++ + + F+ AL+ M + + P+ T
Sbjct: 82 KALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAI 141
Query: 104 LIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAG 163
L + Y T + M D+ + N L S +++T +S
Sbjct: 142 LAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR- 200
Query: 164 IQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQME 223
+P ++NIL + Y V++ M + T+VTYN ++ + R+ +K+
Sbjct: 201 FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 260
Query: 224 YLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY 283
+ M+ + + V+ +++ +G AG+ +K V + + + +N L+ +
Sbjct: 261 EFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVF 320
Query: 284 GRLKCFAEMKGVLEVMQQRG-CKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ V E M + G C P+ VT+ ++R G A F +E+M E L
Sbjct: 321 CKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGF---MERMGEHGL 377
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 3/178 (1%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
G+ + +KA +F MV EG N ++ AL+ + + A ++ E M C P
Sbjct: 285 FGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSP 344
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V T++++I+ ++ + M G+R + TYN +I + A +
Sbjct: 345 NVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVF 404
Query: 122 VKMLSEDCEPDVWTMNCTLRAF---GNSGQIDTMEKCYEKFQSAGIQPSINTFNILLD 176
KM C P++ T N + A S + K + G P TFN +L+
Sbjct: 405 GKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLN 462
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 32/360 (8%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
LG+CK+ + M+ EGC + + F +L+ AY RSG + A+ LL+ M + CQP
Sbjct: 350 LGRCKR------ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC-GCQP 402
Query: 62 DVNTYSILIKSCLKAFAFDKVQAL------LSDMSTQGIRPNTVTYNTLIDAYGRAKMFA 115
Y+ILI + L +M + N V + L A F
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 116 EMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILL 175
+ + +M+S+ PD T + + N+ ++D +E+ +S + P + T+ IL+
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILI 522
Query: 176 DSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIK 235
DS+ K G ++ + M + + +VTY +I A+ +A + LF +M SE
Sbjct: 523 DSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582
Query: 236 PSCVTLCSLVRAYGHAGKPEKLGSV--------------LRF-IDNSDIMLDTVF-FNCL 279
P+ VT +L+ + +G+ EK + + F ID+ +I +F + L
Sbjct: 583 PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGAL 642
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
VD + E + +L+VM GC+P+ + Y ++ + G + A Q + KM E
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA---QMVFTKMSE 699
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 160/378 (42%), Gaps = 58/378 (15%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EKA+ + + M+ +G +T +++ ++ + D AF L E MK+ PDV TY+I
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN-HVVPDVFTYTI 520
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI S K + + +M G PN VTY LI AY +A+ + MLSE
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ-SAGI---------------QPSINTFN 172
C P+V T + SGQI+ + Y + + +A I P+I T+
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 173 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLF------ 226
L+D KA ++ +++ M + Y+ +ID F + G L + + +F
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 227 --------------RLMRSERI---------------KPSCVTLCSLVRAYGHAGKPEKL 257
RL + +R+ P+ + ++ GK ++
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760
Query: 258 GSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ---RGCKPDKVTYRTM 314
++ ++ + V + ++D +G+ ++ LE+M+Q +GC P+ VTYR +
Sbjct: 761 YRLMSMMEEKGCHPNVVTYTAMIDGFGKA---GKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 315 VRAYSTNGMKNHAKEFQD 332
+ G+ + A + D
Sbjct: 818 INHCCAAGLLDDAHQLLD 835
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 147/343 (42%), Gaps = 17/343 (4%)
Query: 4 KCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDC---- 59
K ++ A+ELF+ M+ EGC N ++TAL+ + +SG +KA + M+ D
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621
Query: 60 -----------QPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAY 108
P++ TY L+ KA + + LL MS +G PN + Y+ LID +
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681
Query: 109 GRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSI 168
+ E ++ KM P+V+T + + ++D K + P++
Sbjct: 682 CKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNV 741
Query: 169 NTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRL 228
+ ++D K G ++ +M M++ +VTY +ID FG+AG + + L R
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801
Query: 229 MRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKC 288
M ++ P+ VT L+ AG + +L + + + +++ + R
Sbjct: 802 MGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE-- 859
Query: 289 FAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQ 331
F G+L+ + + P YR ++ ++ G A E
Sbjct: 860 FIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELH 902
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 143/344 (41%), Gaps = 17/344 (4%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E A + + M+D N + + L +G F+KA+S++ M + PD +TYS
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM-SKGFIPDTSTYSK 485
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I A D L +M + + P+ TY LID++ + + + +M+ +
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P+V T + A+ + ++ + + +E S G P++ T+ L+D + K+G EK
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 189 AVMEYMQKYH----------------YSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 232
+ M+ I TY ++D +A +K+ L +M E
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665
Query: 233 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 292
+P+ + +L+ + GK ++ V + + ++ L+D + K
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 293 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK 336
VL M + C P+ + Y M+ G + A ++E+
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 18/343 (5%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
+ A+ + + M D G + + + + ++G + +A +L+E + + D Y+
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK----EEFKLDTVIYTQ 304
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
+I +A F++ LS M + PN VTY L+ R + + L M++E
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
C P N + A+ SG K +K G QP +NIL+ G G+ EK+
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGN-EKLP 421
Query: 189 A--VMEYMQKYH---YSWTIVTYNIVIDAFGR----AGDLKQMEYLFRLMRSERIKPSCV 239
+ V+E +K + +V + + R AG ++ + R M S+ P
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481
Query: 240 TLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVM 299
T ++ +A K + + + ++ ++ D + L+D++ ++ + + + M
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541
Query: 300 QQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCL 342
+ GC P+ VTY ++ AY + A E +++ + E C+
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM--LSEGCI 582
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 34/263 (12%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + ++A +L M EGC+ N + AL+ + + G D+A + M P
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGP 704
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
+V TYS LI K D +LS M PN + Y +ID + E +
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 122 VKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKA 181
M + C P+V T + FG +G++D + + + G P+ T+ +L++ A
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824
Query: 182 GHFEKMSAVMEYMQKYHYSW---------------------------------TIVTYNI 208
G + +++ M++ ++ I Y I
Sbjct: 825 GLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRI 884
Query: 209 VIDAFGRAGDLKQMEYLFRLMRS 231
+ID+F +AG L+ L + M S
Sbjct: 885 LIDSFCKAGRLELALELHKXMSS 907
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 48/260 (18%)
Query: 67 SILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLS 126
++LI+ C + ++ L + G +P+ +TYN L+
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALV--------------------- 239
Query: 127 EDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEK 186
R F + ++DT + + +G T + KAG + +
Sbjct: 240 --------------RVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWRE 285
Query: 187 MSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQ-MEYLFRLMRSERIKPSCVT----L 241
A++E K + V Y +I A ++ M++L R MRS P+ VT L
Sbjct: 286 ALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSR-MRSSSCIPNVVTYRILL 341
Query: 242 CSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQ 301
C +R G+ ++ +L + FN L+ AY R ++ +L+ M
Sbjct: 342 CGCLRKR-QLGRCKR---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD 397
Query: 302 RGCKPDKVTYRTMVRAYSTN 321
GC+P V Y ++ N
Sbjct: 398 CGCQPGYVVYNILIGGICGN 417
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 6/240 (2%)
Query: 100 TYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKF 159
Y+ L++ G E L ++ ED E +N +R +G + + +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223
Query: 160 QSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDL 219
+ G +PS T+N L+ + +A + V M ++ T + +AG
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283
Query: 220 KQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCL 279
++ L+ E K V ++ A E+ L + +S + + V + L
Sbjct: 284 REA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 280 VDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+ R + K +L +M GC P + + +++ AY +G ++A + L++KM +
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK---LLKKMGD 397
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 12/335 (3%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
+A L M+ GC + ++T LL A +S F +A +L+ M+ C P++ TY+++
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVI 221
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
I + D + L+ +S+ G +P+TV+Y T++ AK + ++E +M+ ++C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P+ T + +R F G ++ + E+ G + NI++++ K G +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+ M Y S ++Y V+ RA + + L + M + P+ VT + +
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAY---GRLKCFAEMKGVLEVMQQRGCKP 306
G E+ ++ + ++ V +N LV+ + GR+ LE+ CKP
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV------DSALELFYSMPCKP 455
Query: 307 DKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETC 341
+ +TY T++ + A E L E + + C
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAEL--LAEMLQKDC 488
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 4/322 (1%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
E+A ++ + M GC ANT +++ + G D AF L +M + C PD +Y+
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM-GSYGCSPDTISYTT 360
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
++K +A ++ + LL +M + PN VT+NT I + + + + + +M
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
CE ++ T N + F G++D+ E F S +P+ T+ LL A + +
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
++ M + + +VT+N+++ F + G + + L M P+ +T +L+
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Query: 249 GHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDK 308
E+ +L + ++ + D V ++ ++ R E + ++Q G +P
Sbjct: 538 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 309 VTYRTMVRAYSTNGMKNHAKEF 330
V Y ++ A + A +F
Sbjct: 598 VIYNKILLALCKRCNTDGAIDF 619
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 50/355 (14%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L + ++ E A EL + MV + C N +F + + GL ++A L+E M C+
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH-GCEV 423
Query: 62 DVNTYSILIKS-CLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
++ TY+ L+ C++ +V + L + +PNT+TY TL+ A+
Sbjct: 424 NIVTYNALVNGFCVQG----RVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 479
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
L +ML +DC P+V T N + F G +D + E+ G P++ T+N LLD K
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ E+ ++ + S IVTY+ +I R +++ +F +++ ++P V
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++ A N+D +D FF AY M
Sbjct: 600 YNKILLALCKRC-------------NTDGAID--FF-----AY---------------MV 624
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEK------MDETCLAMKRPDF 349
GC P+++TY T++ + ++ KE +DL+ + +++ L RP F
Sbjct: 625 SNGCMPNELTYITLIEGLAN---EDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 676
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A + +A G + ++ L++ Y R G D A L+ M PD TY+ +I
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
+ + +LL DM +G +P+ VTY L++A ++ F + L +M ++ C
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
P++ T N + G++D + + S G QP ++ +L A +E + +
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
M + + VT+++++ F R G +++ + M + TLC++V
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN-TTLCNIV--INT 329
Query: 251 AGKPEKLGSVLRFIDNS---DIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
K ++ +F++N DT+ + ++ R + + + K +L+ M ++ C P+
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 308 KVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDE 339
+VT+ T + G+ A L+E+M E
Sbjct: 390 EVTFNTFICILCQKGLIEQATM---LIEQMSE 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
PDV + LI++ + +L G + YNTL+ Y R + +++
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR---YGQLDAA 132
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ S PD +T +R + G++ + G QPS+ T+ +LL++ K
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
+ F + V++ M+ + IVTYN++I+ R G + + S +P V+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQ 300
++++ A + E + + + + M + V F+ LV + R VLE M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 301 QRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
GC + ++ G + A +F
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQF 342
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 11/327 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK+ L Q M G ++ +L Y + G F A LL+HMK + DV TY++
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK-SKGVDADVCTYNM 308
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI ++ K LL DM + I PN VTYNTLI+ + L +MLS
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T N + + G K + ++ G+ PS ++ +LLD K F+
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M++ +TY +ID + G L + L M + I P VT +L+ +
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 249 GHAGK----PEKLGSVLRF-IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
G+ E + + R + + I+ T+ +NC R+ C E + E M G
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC-----RMGCLKEAIRIYEAMILEG 543
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D T+ +V + G A+EF
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 18/330 (5%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A L M +G D + +++AL++ + + G F A ++ +
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLS 510
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ YS LI +C + + + M +G + T+N L+ + +A AE E
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M S+ P+ + +C + +GNSG+ +++ G P+ T+ LL K
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH + ++ + + V YN ++ A ++G+L + LF M I P T
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFI------DNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
SL+ GK +V+ + +++ + V + C VD G K G
Sbjct: 691 YTSLISGLCRKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVD--GMFKAGQWKAG 743
Query: 295 VL--EVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ E M G PD VT M+ YS G
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C + + Y ILI+ L+ + M G P+ T N ++ + ++ +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +ML PDV T N + G + +K + +G P+I T+N +L Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G F+ ++++M+ + TYN++I R+ + + L R MR I P+
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ + + GK +L + + + + V FN L+D + F E + +
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ +G P +V+Y ++ N + A+ F
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 36/347 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M+ G N +F AL+ + G F +A + +M P +Y +L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLL 415
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K FD + M G+ +TY +ID + E + L +M + +
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T + + F G+ T ++ + G+ P+ ++ L+ + + G ++ +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M ++ T+N+++ + +AG + + E R M S+ I P+ V+ L+ YG+
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 251 AGKPEKLGSV-----------------------------------LRFIDNSDIMLDTVF 275
+G+ K SV L+ + +DTV
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N L+ A + A+ + M QR PD TY +++ G
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 138/361 (38%), Gaps = 47/361 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A E + M +G NT SF L++ YG SG KAFS+ + M P
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HP 616
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY L+K K + + L + +TV YNTL+ A ++ A+
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 122 VKMLSEDCEPDVWTMNCTL-------------------RAFGNSGQIDTMEKCY------ 156
+M+ PD +T + A GN M C+
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736
Query: 157 -----------EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
E+ + G P I T N ++D Y + G EK + ++ M + + T
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YNI++ + + D+ L+R + I P +T SLV + E +L+
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMK-----GVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ +D FN L+ KC A + +++VM G DK T MV +
Sbjct: 857 CRGVEVDRYTFNMLIS-----KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 321 N 321
N
Sbjct: 912 N 912
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 1/305 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C++N + L+ Y R G+ + + M P V T + ++ S +K+ V
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ L +M + I P+ T+N LI+ F + + KM P + T N L
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G+ + + +S G+ + T+N+L+ ++ K ++ M+K
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VTYN +I+ F G + L M S + P+ VT +L+ + G ++ +
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ + V + L+D + F +G M++ G ++TY M+ NG
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 323 MKNHA 327
+ A
Sbjct: 458 FLDEA 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 4/315 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
KA F+ +D G + + A++ Y R G +K LL M N + P++ TY+I
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNI 799
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
L+ K L + GI P+ +T ++L+ + M E+ L ++K +
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML-EIGLKILKAFICR 858
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
E D +T N + +G+I+ + S GI +T + ++ + F++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M K S Y +I+ R GD+K + M + +I P V ++VRA
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GK ++ +LRF+ ++ F L+ + E + VM G K D
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 308 KVTYRTMVRAYSTNG 322
V+Y ++ G
Sbjct: 1039 LVSYNVLITGLCAKG 1053
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ E ++ +A + G + + +F L+S +G + AF L++ M +
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM-TSLG 894
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
D +T ++ + F + + +L +MS QGI P + Y LI+ R
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 119 LTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +M++ C P+V + +RA G+ D + P+I +F L+
Sbjct: 955 VVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G+ + + M +V+YN++I GD+ L+ M+ + +
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Query: 238 CVTLCSLVRA 247
T +L+R
Sbjct: 1074 ATTYKALIRG 1083
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 121/328 (36%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF MV ++ ++T+L+S R G A + + + P+ Y+
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA + M G P+ VT N +ID Y R + L +M +++
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L + + T Y GI P T + L+ ++ E
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ T+N++I G++ L ++M S I T ++V
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ ++ VL + I ++ + L++ R+ V E M P V
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MVRA + G + A + KM
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKM 998
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+I+I + R G ++ +FRLM PS T +++ + +G+ + S L+ +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
I D FN L++ F + +++ M++ G P VTY T++ Y G
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 325 NHAKEFQD 332
A E D
Sbjct: 285 KAAIELLD 292
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 11/327 (3%)
Query: 9 EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
EK+ L Q M G ++ +L Y + G F A LL+HMK + DV TY++
Sbjct: 210 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK-SKGVDADVCTYNM 268
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSED 128
LI ++ K LL DM + I PN VTYNTLI+ + L +MLS
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 129 CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMS 188
P+ T N + + G K + ++ G+ PS ++ +LLD K F+
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 189 AVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 248
M++ +TY +ID + G L + L M + I P VT +L+ +
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 249 GHAGK----PEKLGSVLRF-IDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRG 303
G+ E + + R + + I+ T+ +NC R+ C E + E M G
Sbjct: 449 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC-----RMGCLKEAIRIYEAMILEG 503
Query: 304 CKPDKVTYRTMVRAYSTNGMKNHAKEF 330
D T+ +V + G A+EF
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 18/330 (5%)
Query: 3 GKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQ 60
G CK ++A L M +G D + +++AL++ + + G F A ++ +
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLS 470
Query: 61 PDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELT 120
P+ YS LI +C + + + M +G + T+N L+ + +A AE E
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 121 LVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGK 180
+ M S+ P+ + +C + +GNSG+ +++ G P+ T+ LL K
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 181 AGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVT 240
GH + ++ + + V YN ++ A ++G+L + LF M I P T
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 241 LCSLVRAYGHAGKPEKLGSVLRFI------DNSDIMLDTVFFNCLVDAYGRLKCFAEMKG 294
SL+ GK +V+ + +++ + V + C VD G K G
Sbjct: 651 YTSLISGLCRKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVD--GMFKAGQWKAG 703
Query: 295 VL--EVMQQRGCKPDKVTYRTMVRAYSTNG 322
+ E M G PD VT M+ YS G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%)
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
C + + Y ILI+ L+ + M G P+ T N ++ + ++ +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 119 LTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSY 178
L +ML PDV T N + G + +K + +G P+I T+N +L Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 179 GKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSC 238
K G F+ ++++M+ + TYN++I R+ + + L R MR I P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 239 VTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEV 298
VT +L+ + + GK +L + + + + V FN L+D + F E + +
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 299 MQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEF 330
M+ +G P +V+Y ++ N + A+ F
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 36/347 (10%)
Query: 11 AHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILI 70
A +L M+ G N +F AL+ + G F +A + +M P +Y +L+
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLL 375
Query: 71 KSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCE 130
K FD + M G+ +TY +ID + E + L +M + +
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 131 PDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAV 190
PD+ T + + F G+ T ++ + G+ P+ ++ L+ + + G ++ +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 191 MEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGH 250
E M ++ T+N+++ + +AG + + E R M S+ I P+ V+ L+ YG+
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 251 AGKPEKLGSV-----------------------------------LRFIDNSDIMLDTVF 275
+G+ K SV L+ + +DTV
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 276 FNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
+N L+ A + A+ + M QR PD TY +++ G
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 138/361 (38%), Gaps = 47/361 (13%)
Query: 2 LGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQP 61
L K + +A E + M +G NT SF L++ YG SG KAFS+ + M P
Sbjct: 518 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HP 576
Query: 62 DVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTL 121
TY L+K K + + L + +TV YNTL+ A ++ A+
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636
Query: 122 VKMLSEDCEPDVWTMNCTL-------------------RAFGNSGQIDTMEKCY------ 156
+M+ PD +T + A GN M C+
Sbjct: 637 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 696
Query: 157 -----------EKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVT 205
E+ + G P I T N ++D Y + G EK + ++ M + + T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 206 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFID 265
YNI++ + + D+ L+R + I P +T SLV + E +L+
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 266 NSDIMLDTVFFNCLVDAYGRLKCFAEMK-----GVLEVMQQRGCKPDKVTYRTMVRAYST 320
+ +D FN L+ KC A + +++VM G DK T MV +
Sbjct: 817 CRGVEVDRYTFNMLIS-----KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 321 N 321
N
Sbjct: 872 N 872
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 1/305 (0%)
Query: 23 CDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKV 82
C++N + L+ Y R G+ + + M P V T + ++ S +K+ V
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSV 177
Query: 83 QALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRA 142
+ L +M + I P+ T+N LI+ F + + KM P + T N L
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 143 FGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWT 202
+ G+ + + +S G+ + T+N+L+ ++ K ++ M+K
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 203 IVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLR 262
VTYN +I+ F G + L M S + P+ VT +L+ + G ++ +
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 263 FIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNG 322
++ + V + L+D + F +G M++ G ++TY M+ NG
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 323 MKNHA 327
+ A
Sbjct: 418 FLDEA 422
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 4/315 (1%)
Query: 10 KAHELFQAMVDE-GCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSI 68
KA F+ +D G + + A++ Y R G +K LL M N + P++ TY+I
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNI 759
Query: 69 LIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVK-MLSE 127
L+ K L + GI P+ +T ++L+ + M E+ L ++K +
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML-EIGLKILKAFICR 818
Query: 128 DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKM 187
E D +T N + +G+I+ + S GI +T + ++ + F++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 188 SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 247
V+ M K S Y +I+ R GD+K + M + +I P V ++VRA
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 248 YGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPD 307
GK ++ +LRF+ ++ F L+ + E + VM G K D
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 308 KVTYRTMVRAYSTNG 322
V+Y ++ G
Sbjct: 999 LVSYNVLITGLCAKG 1013
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 1 MLGKCKQP--EKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPD 58
+LG C+ E ++ +A + G + + +F L+S +G + AF L++ M +
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM-TSLG 854
Query: 59 CQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEME 118
D +T ++ + F + + +L +MS QGI P + Y LI+ R
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 119 LTLVKMLSED-CEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDS 177
+ +M++ C P+V + +RA G+ D + P+I +F L+
Sbjct: 915 VVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 178 YGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPS 237
K G+ + + M +V+YN++I GD+ L+ M+ + +
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 238 CVTLCSLVRA 247
T +L+R
Sbjct: 1034 ATTYKALIRG 1043
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 121/328 (36%)
Query: 10 KAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPDVNTYSIL 69
KA LF MV ++ ++T+L+S R G A + + + P+ Y+
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 70 IKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLVKMLSEDC 129
+ KA + M G P+ VT N +ID Y R + L +M +++
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 130 EPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAGHFEKMSA 189
P++ T N L + + T Y GI P T + L+ ++ E
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810
Query: 190 VMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 249
+++ T+N++I G++ L ++M S I T ++V
Sbjct: 811 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870
Query: 250 HAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKV 309
+ ++ VL + I ++ + L++ R+ V E M P V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 310 TYRTMVRAYSTNGMKNHAKEFQDLVEKM 337
MVRA + G + A + KM
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKM 958
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 205 TYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFI 264
Y+I+I + R G ++ +FRLM PS T +++ + +G+ + S L+ +
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 265 DNSDIMLDTVFFNCLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMK 324
I D FN L++ F + +++ M++ G P VTY T++ Y G
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 325 NHAKEFQD 332
A E D
Sbjct: 245 KAAIELLD 252
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,167,224,046
Number of Sequences: 23463169
Number of extensions: 196677445
Number of successful extensions: 597747
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6464
Number of HSP's successfully gapped in prelim test: 5365
Number of HSP's that attempted gapping in prelim test: 434448
Number of HSP's gapped (non-prelim): 68324
length of query: 349
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 206
effective length of database: 9,003,962,200
effective search space: 1854816213200
effective search space used: 1854816213200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)