Query 018877
Match_columns 349
No_of_seqs 265 out of 1645
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:26:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhi_A Cathepsin B-like cystei 100.0 6.2E-80 2.1E-84 580.7 20.1 299 30-335 7-318 (325)
2 3qj3_A Cathepsin L-like protei 100.0 4.5E-76 1.6E-80 555.7 27.4 294 6-328 18-330 (331)
3 3qt4_A Cathepsin-L-like midgut 100.0 5.9E-76 2E-80 553.6 26.0 293 6-328 23-328 (329)
4 3pbh_A Procathepsin B; thiol p 100.0 1.6E-75 5.5E-80 549.6 25.2 295 30-332 7-317 (317)
5 1cs8_A Human procathepsin L; p 100.0 5E-75 1.7E-79 546.0 25.7 294 6-328 8-315 (316)
6 2c0y_A Procathepsin S; proenzy 100.0 3E-75 1E-79 547.2 23.9 294 6-328 8-314 (315)
7 1by8_A Protein (procathepsin K 100.0 3.9E-75 1.3E-79 546.3 24.3 293 6-328 7-313 (314)
8 2o6x_A Procathepsin L1, secret 100.0 5.1E-75 1.8E-79 544.5 23.7 291 8-328 3-305 (310)
9 1pci_A Procaricain; zymogen, h 100.0 2.5E-74 8.6E-79 542.2 26.3 292 6-328 18-320 (322)
10 3tnx_A Papain; hydrolase, cyto 100.0 1.6E-73 5.5E-78 541.3 29.0 288 6-328 62-361 (363)
11 1xkg_A DER P I, major mite fec 100.0 3E-72 1E-76 525.1 20.3 285 8-332 6-305 (312)
12 3pdf_A Cathepsin C, dipeptidyl 100.0 7.3E-71 2.5E-75 535.9 23.6 284 24-333 135-439 (441)
13 3cbj_A Cathepsin B; cathepsin 100.0 2.8E-68 9.7E-73 490.0 21.5 246 91-338 5-266 (266)
14 3qsd_A Cathepsin B-like peptid 100.0 2.1E-66 7.2E-71 474.6 22.3 236 92-330 2-254 (254)
15 8pch_A Cathepsin H; hydrolase, 100.0 3.4E-64 1.1E-68 450.8 20.3 212 93-330 1-219 (220)
16 2xu3_A Cathepsin L1; hydrolase 100.0 1.5E-63 5.3E-68 446.3 23.4 211 93-328 1-219 (220)
17 3i06_A Cruzipain; autocatalyti 100.0 1.9E-63 6.6E-68 444.1 22.9 209 93-328 1-213 (215)
18 1m6d_A Cathepsin F, catsf; pap 100.0 1.1E-63 3.7E-68 445.4 21.1 208 93-329 1-213 (214)
19 3kwz_A Cathepsin K; enzyme inh 100.0 1.8E-63 6.1E-68 444.6 22.1 208 93-328 1-214 (215)
20 3ovx_A Cathepsin S; hydrolase, 100.0 3E-63 1E-67 444.1 21.2 210 93-328 2-217 (218)
21 3p5u_A Actinidin; SAD, cystein 100.0 1.4E-62 4.8E-67 440.1 21.8 212 93-331 1-219 (220)
22 2b1m_A SPE31; papain-like, sug 100.0 2.5E-62 8.4E-67 445.0 22.9 212 92-332 1-227 (246)
23 1ppo_A Protease omega; hydrola 100.0 2.3E-62 7.9E-67 437.3 22.0 207 93-328 1-214 (216)
24 3f5v_A DER P 1 allergen; aller 100.0 1.2E-62 4E-67 441.3 19.6 208 91-328 8-221 (222)
25 1iwd_A Ervatamin B; cysteine p 100.0 4.6E-62 1.6E-66 434.9 22.2 205 93-328 1-213 (215)
26 1cqd_A Protein (protease II); 100.0 3.9E-62 1.3E-66 437.3 21.8 208 92-329 2-217 (221)
27 1yal_A Chymopapain; hydrolase, 100.0 4.3E-62 1.5E-66 436.1 21.6 207 93-328 1-214 (218)
28 3u8e_A Papain-like cysteine pr 100.0 3.4E-62 1.2E-66 438.1 19.4 206 93-328 1-218 (222)
29 1s4v_A Cysteine endopeptidase; 100.0 1.2E-61 4.2E-66 436.2 22.7 213 92-331 1-221 (229)
30 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.5E-61 5E-66 431.3 21.5 204 93-328 1-210 (213)
31 2cio_A Papain; hydrolase/inhib 100.0 3.2E-61 1.1E-65 428.7 23.6 203 93-328 1-210 (212)
32 1o0e_A Ervatamin C; plant cyst 100.0 3.8E-61 1.3E-65 426.9 23.2 200 93-328 1-206 (208)
33 2fo5_A Cysteine proteinase EP- 100.0 2E-61 6.9E-66 441.7 21.7 217 92-333 3-228 (262)
34 1deu_A Procathepsin X; cystein 100.0 2E-61 7E-66 446.1 21.6 227 90-331 33-277 (277)
35 2bdz_A Mexicain; cysteine prot 100.0 5.7E-61 2E-65 427.6 23.5 204 93-329 1-211 (214)
36 2oul_A Falcipain 2; cysteine p 100.0 2.4E-61 8.2E-66 437.5 20.8 208 91-329 16-240 (241)
37 3bwk_A Cysteine protease falci 100.0 3.7E-61 1.3E-65 436.8 20.3 208 91-329 18-242 (243)
38 3f75_A Toxopain-2, cathepsin L 100.0 1.5E-61 5E-66 434.9 17.3 211 91-328 5-223 (224)
39 2wbf_X Serine-repeat antigen p 100.0 6E-55 2.1E-59 401.4 19.7 230 96-332 10-261 (265)
40 3ois_A Cysteine protease; alph 100.0 4.1E-55 1.4E-59 407.2 12.0 248 48-315 13-273 (291)
41 2e01_A Cysteine proteinase 1; 100.0 2.2E-41 7.6E-46 327.3 13.8 237 92-337 52-432 (457)
42 2cb5_A Protein (bleomycin hydr 100.0 1E-40 3.5E-45 322.3 17.3 232 92-337 47-431 (453)
43 3pw3_A Aminopeptidase C; bleom 100.0 2.1E-35 7.1E-40 279.7 15.1 203 109-314 22-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.1 1.1E-10 3.9E-15 90.7 5.4 66 6-73 21-90 (106)
45 2l95_A Crammer, LP06209P; cyst 98.9 4E-10 1.4E-14 83.6 3.8 67 6-74 6-78 (80)
46 1pxv_A Cysteine protease; hydr 97.8 0.00038 1.3E-08 57.9 12.1 137 113-316 25-164 (183)
47 1cv8_A Staphopain; cysteine pr 97.4 0.0029 1E-07 52.4 12.8 121 114-301 17-145 (174)
48 1x9y_A Cysteine proteinase; ha 97.4 0.0012 4E-08 60.6 11.4 136 113-316 201-340 (367)
49 3erv_A Putative C39-like pepti 90.9 0.54 1.9E-05 41.3 7.1 61 232-299 130-196 (236)
50 4d8b_A Streptopain; papain fol 77.4 4 0.00014 36.2 6.1 73 235-333 172-256 (261)
51 1dki_A Pyrogenic exotoxin B zy 67.9 7.6 0.00026 36.3 5.8 61 235-321 290-353 (371)
52 3bb7_A Interpain A; cysteine p 64.4 13 0.00045 33.9 6.6 60 235-313 239-298 (321)
53 2r9f_A Calpain-1 catalytic sub 40.5 61 0.0021 29.6 7.0 73 235-312 211-312 (339)
54 1ziv_A Calpain 9; cysteine pro 36.3 70 0.0024 29.2 6.6 29 273-301 243-274 (339)
55 2nqa_A Calpain 8; calpain, cal 29.5 1.1E+02 0.0039 27.6 6.8 73 235-312 206-307 (326)
56 1y08_A Hypothetical protein SP 23.4 86 0.0029 28.4 4.6 62 234-313 220-282 (323)
No 1
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=6.2e-80 Score=580.66 Aligned_cols=299 Identities=44% Similarity=0.905 Sum_probs=209.7
Q ss_pred ccccHHHHHHHHHhCCCCCeEEecCCCCCCCCHHHHHHhhCCCCCCCC--CcCCCCccccCCCCCCCCceecCcCCCCCC
Q 018877 30 SHILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKG--LLLGVPVKTHDKSLKLPKSFDARSAWPQCS 107 (349)
Q Consensus 30 ~~~~~~~~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lP~s~D~R~~w~~~~ 107 (349)
..++.+++|++||++++.+|++++|++|+|||.+||++++|..+.+.. .....++...+...+||++||||++|++|+
T Consensus 7 a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~w~~~g 86 (325)
T 3hhi_A 7 APVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPNCP 86 (325)
T ss_dssp -------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHHHSTTCT
T ss_pred cccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHhCCCCCCcccccccCccccccccccCCCCcEehhHhcCCCC
Confidence 456777899999997678999999978999999999998886543322 111112111112357999999999999999
Q ss_pred CCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCC-CccCCHHHHHHhcCCCCCCCCCCCchHHHHHHHHHcCcCCCCcccC
Q 018877 108 TISRILDQGHCGSCWAFGAVEALSDRFCIHFGM-NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPY 186 (349)
Q Consensus 108 ~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~-~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY 186 (349)
+|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+. .++.||+||++..|++|+.++|+++|++|||
T Consensus 87 ~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~-~~~~GC~GG~~~~A~~yi~~~Gi~~e~~yPY 165 (325)
T 3hhi_A 87 TIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCS-DCGDGCNGGDPDRAWAYFSSTGLVSDYCQPY 165 (325)
T ss_dssp TTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCG-GGBCTTBCBCHHHHHHHHHHTCBCBTTTSCC
T ss_pred ccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHhCCCcccccCC
Confidence 999999999999999999999999999999997 89999999999986 3468999999999999999999999999999
Q ss_pred C-CCCCCCC--------CCCC-CCCCCccccccccccccccccceeeeeeeeEeCCCHHHHHHHHHhCCCEEEEEEcccc
Q 018877 187 F-DSTGCSH--------PGCE-PAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYED 256 (349)
Q Consensus 187 ~-~~~~~~~--------~~c~-~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~i~v~~~ 256 (349)
. +. |.+ ..|. ....++.|...|... .+...+.+.+..|.+ .++++||++|+++|||+|+|+++++
T Consensus 166 ~~~~--c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~--~~~~~~~~~~~~y~v-~~~~~i~~~i~~~GPV~v~i~~~~~ 240 (325)
T 3hhi_A 166 PFPH--CSHHSKSKNGYPPCSQFNFDTPKCDYTCDDP--TIPVVNYRSWTSYAL-QGEDDYMRELFFRGPFEVAFDVYED 240 (325)
T ss_dssp SSCC--CBSSSCCTTCCCBGGGCCCCCCCCCSSCSST--TSCCCCBCEEEEEEE-CSHHHHHHHHHHHCCEEEEEEEEHH
T ss_pred cccc--ccccccccccCCCCCCcccCCcchhhccccc--ccccceEEeecceEe-CCHHHHHHHHHHCCCEEEEEEeccc
Confidence 6 43 332 3454 334566777777632 233345566778877 8899999999999999999999989
Q ss_pred cccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCccccccceeEeecCCCCcc
Q 018877 257 FAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLV 335 (349)
Q Consensus 257 f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~p~~~~~~ 335 (349)
|++|++|||..+++...++|||+||||| +++|++|||||||||++||++|||||+||.|+|||++++++++|.++|-.
T Consensus 241 f~~Y~~GVy~~~~~~~~~~HaV~iVGyG-~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~p~~~~~~ 318 (325)
T 3hhi_A 241 FIAYNSGVYHHVSGQYLGGHAVRLVGWG-TSNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIPLAPNTA 318 (325)
T ss_dssp HHTCCSSEECCCSCCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEEEC-----
T ss_pred cccccCceecCCCCCCCCCEEEEEEEEE-ecCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEeecCCCCcc
Confidence 9999999999888777789999999999 78899999999999999999999999999999999999999999998754
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4.5e-76 Score=555.67 Aligned_cols=294 Identities=29% Similarity=0.548 Sum_probs=246.3
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhC---CCCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGL 78 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~---~~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~ 78 (349)
+...|+.|+++|.|. .+..|...|+.+|.++ +|++||+. .+.+|++++| +|+|||.+||++ +++.+++....
T Consensus 18 l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlt~eEf~~~~~~~~~~~~~~ 96 (331)
T 3qj3_A 18 VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVN-LFTDMTPEEMKAYTHGLIMPADLH 96 (331)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCS-TTTTCCHHHHHHHHSCCCCCSSTT
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeeccc-ccccCCHHHHHHHhcccccccccc
Confidence 457899999999999 5668899999999986 69999985 3689999999 999999999998 45554332111
Q ss_pred cCCCCcccc-----CCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CccCCHHHHHH
Q 018877 79 LLGVPVKTH-----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGM--NLSLSVNDLLA 151 (349)
Q Consensus 79 ~~~~~~~~~-----~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~--~~~lS~q~l~d 151 (349)
....++... ....+||++||||++ |+||||||||.||||||||++++||++++++++. .+.||+|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~lP~s~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lvd 172 (331)
T 3qj3_A 97 KNGIPIKTREDLGLNASVRYPASFDWRDQ----GMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVD 172 (331)
T ss_dssp TTCEEECSGGGGTCCSSCCCCSSEEGGGG----TCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHH
T ss_pred ccCcccccccccccccccCCCcceecccC----CccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhh
Confidence 111111111 123579999999998 7899999999999999999999999999999998 99999999999
Q ss_pred hcCCCCCCCCCCCchHHHHHHHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-
Q 018877 152 CCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR- 229 (349)
Q Consensus 152 c~~~~~~~gC~GG~~~~a~~~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~- 229 (349)
|+.. +.||+||++..|++|+.++ ||++|++|||.+.. ..|..... ...+++.+|.
T Consensus 173 C~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~ 229 (331)
T 3qj3_A 173 CVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMAD-----------------GNCHYDPN----QVAARLSGYVY 229 (331)
T ss_dssp HCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCTT----SEEECCSEEEE
T ss_pred hccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCC-----------------CCCCCCcc----cceeEeeEEEE
Confidence 9963 6899999999999999998 99999999996641 13332221 3445677777
Q ss_pred eC-CCHHHHHHHHHhCCCEEEEEEcccccccCCCceeecCCC-CccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCc
Q 018877 230 IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADG 307 (349)
Q Consensus 230 ~~-~~~~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~-~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~G 307 (349)
+. .++++||++|+++|||+|+|+++.+|++|++|||..+.+ ...++|||+||||| +++|++|||||||||++||++|
T Consensus 230 v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~G 308 (331)
T 3qj3_A 230 LSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYG-NENGQDYWLVKNSWGDGWGLDG 308 (331)
T ss_dssp ESSCCHHHHHHHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTT
T ss_pred eCCCCHHHHHHHHHhCCCEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEe-ccCCceEEEEEcCCCCCcCCCC
Confidence 65 488999999999999999999987799999999998765 35689999999999 7889999999999999999999
Q ss_pred eEEEEecC-CccccccceeEee
Q 018877 308 YFKIKRGS-NECGIEEDVVAGL 328 (349)
Q Consensus 308 y~~i~~g~-n~cgI~~~~~~~~ 328 (349)
||||+||. |.|||++.+.+++
T Consensus 309 Y~~i~r~~~n~CgI~~~~~~p~ 330 (331)
T 3qj3_A 309 YFKIARNANNHCGIAGVASVPT 330 (331)
T ss_dssp EEEEECSSSSGGGTTTSCEEEE
T ss_pred EEEEEcCCCCccCcCCceeeee
Confidence 99999998 9999999988764
No 3
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=5.9e-76 Score=553.63 Aligned_cols=293 Identities=28% Similarity=0.516 Sum_probs=244.1
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhC---CCCCeEEecCCCCCCCCHHHHHHhhCCCCCCCCCc
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLL 79 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~---~~~~~~~~~n~~fsd~t~eE~~~~~~~~~~~~~~~ 79 (349)
+...|+.|+++|+|. .+..|...|+.+|.++ +|++||+. .+.+|++++| +|+|||.+||++++|.++......
T Consensus 23 ~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlt~eEf~~~~g~~~~~~~~~ 101 (329)
T 3qt4_A 23 FQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMN-QFGDMSKEEFLAYVNRGKAQKPKH 101 (329)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCC-GGGGCCHHHHHHHHHHTCCC----
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEecc-ccccCCHHHHHHhcCCcccccccc
Confidence 557899999999999 5557889999999986 69999984 4679999999 999999999999776553211111
Q ss_pred C---CCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCC
Q 018877 80 L---GVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFL 156 (349)
Q Consensus 80 ~---~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~ 156 (349)
. ...... ...+||++||||++ +||||||||.||||||||++++||++++++++..+.||+|+|+||+...
T Consensus 102 ~~~~~~~~~~--~~~~lP~~~DwR~~-----~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~ 174 (329)
T 3qt4_A 102 PENLRMPYVS--SKKPLAASVDWRSN-----AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSY 174 (329)
T ss_dssp --CCEEECCC--CCSCCCSCEECTTT-----SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGG
T ss_pred cccccccccC--CccCCCCCEEcccc-----ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcccc
Confidence 0 011111 12589999999985 4999999999999999999999999999999999999999999998633
Q ss_pred CCCCCCCCchHHHHHHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCH
Q 018877 157 CGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDP 234 (349)
Q Consensus 157 ~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~ 234 (349)
.+.||+||++..|++|+.++|+++|++|||.+.. ..|..... ...+++.+|. ++ .++
T Consensus 175 g~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~e 233 (329)
T 3qt4_A 175 GNAGCDGGWMDSAFSYIHDYGIMSESAYPYEAQG-----------------DYCRFDSS----QSVTTLSGYYDLPSGDE 233 (329)
T ss_dssp TCCTTBCCCHHHHHHHHHHSCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSEEEECCTTCH
T ss_pred CCCCCCCCChhHHHHHHHHcCCCcHHHeeeecCC-----------------CCCCCCcc----cceEEeceEEEecCCCH
Confidence 4689999999999999999999999999996641 12332211 2335667777 55 478
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCC-CccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEe
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 313 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~-~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 313 (349)
++||++|+++|||+|+|+++.+|++|++|||..+.+ ...++|||+||||| +++|++|||||||||++||++|||||+|
T Consensus 234 ~~lk~al~~~GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r 312 (329)
T 3qt4_A 234 NSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYG-SDNGQDYWILKNSWGSGWGESGYWRQVR 312 (329)
T ss_dssp HHHHHHHHHTCCEEEEECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEES
T ss_pred HHHHHHHHhCCCEEEEEecChhhhhccCceeecCCCCCCcCCEEEEEEEEE-eeCCccEEEEEeCCCCcccCCcEEEEEe
Confidence 999999999999999999988999999999998765 35689999999999 7789999999999999999999999999
Q ss_pred cC-CccccccceeEee
Q 018877 314 GS-NECGIEEDVVAGL 328 (349)
Q Consensus 314 g~-n~cgI~~~~~~~~ 328 (349)
|. |.|||++.+.+++
T Consensus 313 ~~~n~CgI~~~~~yp~ 328 (329)
T 3qt4_A 313 NYGNNCGIATAASYPA 328 (329)
T ss_dssp SSSSGGGTTTTCEEEE
T ss_pred CCCCccCCCCceeEee
Confidence 98 9999999998764
No 4
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.6e-75 Score=549.56 Aligned_cols=295 Identities=49% Similarity=1.020 Sum_probs=248.2
Q ss_pred ccccHHHHHHHHHhCCCCCeEEecCCCCCCCCHHHHHHhhCCCCCCCCCcCCCCccccCCCCCCCCceecCcCCCCCCCC
Q 018877 30 SHILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTI 109 (349)
Q Consensus 30 ~~~~~~~~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D~R~~w~~~~~v 109 (349)
+.++.+++|++||+ .+.+|++++| |++++.||++.++|.++.+.... .+.. .....+||++||||++|++|+.|
T Consensus 7 ~~~~~~~~i~~~N~-~~~~~~~~~n--f~~~~~e~~~~~lg~~~~~~~~~--~~~~-~~~~~~lP~s~DwR~~~~~c~~v 80 (317)
T 3pbh_A 7 FHPLSDELVNYVNK-RNTTWQAGHN--FYNVDMSYLKRLCGTFLGGPKPP--QRVM-FTEDLKLPASFDAREQWPQCPTI 80 (317)
T ss_dssp CCSSCHHHHHHHHH-HTCSEEECCC--CSSCCHHHHHHTCCBCTTCCCCS--EEEC-CCSCCCCCSSEEHHHHCTTCGGG
T ss_pred cCcccHHHHHHHHC-CCCCeEEeec--cccCCHHHHHHHcCCCCCccccC--cccc-cccccCCCCCEechhccCCCCCc
Confidence 45678899999998 5789999998 99999999999998765443211 1111 12235899999999999999999
Q ss_pred CcCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CccCCHHHHHHhcCCCCCCCCCCCchHHHHHHHHHcCcCCCCcc---
Q 018877 110 SRILDQGHCGSCWAFGAVEALSDRFCIHFGM--NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD--- 184 (349)
Q Consensus 110 ~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~--~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y--- 184 (349)
+||||||.||||||||++++||++++|+++. .+.||+|+|+||+...++.||+||++..|++|+.++|+++|++|
T Consensus 81 tpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~ 160 (317)
T 3pbh_A 81 KEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESH 160 (317)
T ss_dssp TCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCC
T ss_pred CCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCC
Confidence 9999999999999999999999999999873 89999999999986335689999999999999999999999888
Q ss_pred ----cCCCCCCC------CCCCCCCCCCCccccccccccccc-cccceeeeeeeeEeCCCHHHHHHHHHhCCCEEEEEEc
Q 018877 185 ----PYFDSTGC------SHPGCEPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV 253 (349)
Q Consensus 185 ----PY~~~~~~------~~~~c~~~~~~~~~~~~c~~~~~~-~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~i~v 253 (349)
||.... | ....|.....++.|...|...... +...+.+....|.++.++++||++|+++|||+|+|++
T Consensus 161 ~~c~PY~~~~-c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~ 239 (317)
T 3pbh_A 161 VGCRPYSIPP-CEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSV 239 (317)
T ss_dssp CBSSCCCSCC-CCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCcccCc-ccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEe
Confidence 996421 2 235565545567777778654322 3334445555566777899999999999999999999
Q ss_pred ccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCccccccceeEeecCCC
Q 018877 254 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 332 (349)
Q Consensus 254 ~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~p~~~ 332 (349)
+++|++|++|||.++++...++|||+||||| +++|++|||||||||++||++|||||+||.|+|||++++++++|.++
T Consensus 240 ~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG-~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~p~~d 317 (317)
T 3pbh_A 240 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWG-VENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTD 317 (317)
T ss_dssp EGGGGGEEEEEECCCSCCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCCC
T ss_pred cccccCCCCcEEccCCCCCCCCEEEEEEEEE-EeCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeeecCCC
Confidence 9999999999999988777789999999999 78899999999999999999999999999999999999999999864
No 5
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5e-75 Score=545.99 Aligned_cols=294 Identities=26% Similarity=0.498 Sum_probs=243.9
Q ss_pred hHHHHHHHHHHhhhhcccccccccccccHHH--HHHHHHhC---CCCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCCc
Q 018877 6 IRSNWMWCCLQTFAEGVVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLL 79 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~~~~~e~~~r~~~~~~~--~i~~~n~~---~~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~~ 79 (349)
++..|+.|+++|.|..+.+|...|+.+|.++ +|++||++ .+.+|++++| +|+|||.+||++ +++..+....
T Consensus 8 ~~~~f~~~~~~~~k~Y~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~F~Dlt~eEf~~~~~g~~~~~~~-- 84 (316)
T 1cs8_A 8 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN-AFGDMTSEEFRQVMNGFQNRKPR-- 84 (316)
T ss_dssp GHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCC-TTTTCCHHHHHHHHCCBCCCCCS--
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccC-ccCCCCHHHHHHHhcCCCCCccc--
Confidence 4578999999999988777889999999985 69999984 2579999999 999999999987 5554432211
Q ss_pred CCCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCC
Q 018877 80 LGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGD 159 (349)
Q Consensus 80 ~~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~ 159 (349)
....+ ..+...+||++||||++ |+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+....+.
T Consensus 85 ~~~~~-~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 KGKVF-QEPLFYEAPRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp CCEEC-CCCTTCCCCSCEEGGGG----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred cCccc-cCccccCCCCcEecCCC----CCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 11111 11223479999999998 78999999999999999999999999999999999999999999998533468
Q ss_pred CCCCCchHHHHHHHH-HcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHH
Q 018877 160 GCDGGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDI 237 (349)
Q Consensus 160 gC~GG~~~~a~~~~~-~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~i 237 (349)
||+||++..|++|+. +.|+++|++|||.+.. ..|..... ...+.+.+|. ++.++++|
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~i 218 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-----------------ESCKYNPK----YSVANDAGFVDIPKQEKAL 218 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCCEEECCSCHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCC-----------------CCcCCCCc----cceeEeccEEEeCCCHHHH
Confidence 999999999999996 6899999999996541 12332211 2345677776 66688999
Q ss_pred HHHHHhCCCEEEEEEcc-cccccCCCceeecCCC-CccCCcEEEEEEeC---CCCCCccEEEEEccCCCCCCCCceEEEE
Q 018877 238 MAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWG---TSDDGEDYWILANQWNRSWGADGYFKIK 312 (349)
Q Consensus 238 k~~l~~~gPV~v~i~v~-~~f~~y~~Giy~~~~~-~~~~~Hav~IVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 312 (349)
|++|+++|||+|+|+++ ++|++|++|||..+.+ ...++|||+||||| ++++|++|||||||||++||++|||||+
T Consensus 219 k~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~ 298 (316)
T 1cs8_A 219 MKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMA 298 (316)
T ss_dssp HHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHhcCCEEEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEE
Confidence 99999999999999997 5899999999998744 44689999999999 5447899999999999999999999999
Q ss_pred ecC-CccccccceeEee
Q 018877 313 RGS-NECGIEEDVVAGL 328 (349)
Q Consensus 313 ~g~-n~cgI~~~~~~~~ 328 (349)
||. |.|||++.+.+++
T Consensus 299 r~~~n~CgI~~~~~~p~ 315 (316)
T 1cs8_A 299 KDRRNHCGIASAASYPT 315 (316)
T ss_dssp CSSSSGGGTTTSCEEEC
T ss_pred CCCCCccCccceeeEee
Confidence 997 8999999988664
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=3e-75 Score=547.22 Aligned_cols=294 Identities=23% Similarity=0.471 Sum_probs=242.1
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCC---CCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGL 78 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~---~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~ 78 (349)
++..|+.|+++|.|. .+..|...|+.+|.++ +|++||++. +.+|++++| +|+|||.+||++ ++|..+.....
T Consensus 8 ~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~ 86 (315)
T 2c0y_A 8 LDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMN-HLGDMTSEEVMSLMSSLRVPSQWQ 86 (315)
T ss_dssp GHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCC-GGGGCCHHHHHHHTTSBCCCCGGG
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccC-ccccCCHHHHHHHhcCCCCCcccc
Confidence 457899999999999 5678999999999985 699999852 479999999 999999999976 66654322111
Q ss_pred cCCCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhc-CCCC
Q 018877 79 LLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACC-GFLC 157 (349)
Q Consensus 79 ~~~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~-~~~~ 157 (349)
....+. .+...+||++||||++ ++|+||||||.||||||||++++||++++|+++..+.||+|+|+||+ ....
T Consensus 87 -~~~~~~-~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~ 160 (315)
T 2c0y_A 87 -RNITYK-SNPNRILPDSVDWREK----GCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYG 160 (315)
T ss_dssp -SCBCC-------CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGT
T ss_pred -CCcccc-CcccCCCCCeEecCCC----CCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccC
Confidence 111111 1123479999999987 78999999999999999999999999999999999999999999998 4334
Q ss_pred CCCCCCCchHHHHHHHHH-cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCH
Q 018877 158 GDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDP 234 (349)
Q Consensus 158 ~~gC~GG~~~~a~~~~~~-~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~ 234 (349)
+.||+||++..|++|+.+ .|+++|++|||.+.. ..|..... ...+.+.+|. ++ .++
T Consensus 161 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~ 219 (315)
T 2c0y_A 161 NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-----------------QKCQYDSK----YRAATCSKYTELPYGRE 219 (315)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCEEEECCTTCH
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCC-----------------CCcccCCc----ccccccCCeEEeCCCCH
Confidence 789999999999999985 799999999996541 12332211 2345667776 65 488
Q ss_pred HHHHHHHHhCCCEEEEEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEe
Q 018877 235 EDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 313 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 313 (349)
++||++|+++|||+|+|+++ ++|++|++|||..+.+...++|||+||||| +++|++|||||||||++||++|||||+|
T Consensus 220 ~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r 298 (315)
T 2c0y_A 220 DVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMAR 298 (315)
T ss_dssp HHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEe-ecCCCcEEEEEcCCCCCcCCCcEEEEEc
Confidence 99999999999999999998 689999999999874444789999999999 6689999999999999999999999999
Q ss_pred cC-CccccccceeEee
Q 018877 314 GS-NECGIEEDVVAGL 328 (349)
Q Consensus 314 g~-n~cgI~~~~~~~~ 328 (349)
|. |.|||++.+.+++
T Consensus 299 ~~~n~CgI~~~~~~p~ 314 (315)
T 2c0y_A 299 NKGNHCGIASFPSYPE 314 (315)
T ss_dssp SSSSGGGTTTSCEEEE
T ss_pred CCCCccCcCceeEEee
Confidence 95 9999999988764
No 7
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=3.9e-75 Score=546.29 Aligned_cols=293 Identities=26% Similarity=0.482 Sum_probs=241.1
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCC---CCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGL 78 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~---~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~ 78 (349)
++..|+.|+++|.|. .+..|...|+.+|.++ +|++||++. +.+|++++| +|+|||.+||++ ++|..+.....
T Consensus 7 ~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 7 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMN-HLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCC-TTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEccc-ccccCCHHHHHHHhccCCCCcccc
Confidence 457899999999999 5678999999999985 699999853 479999999 999999999976 56654432211
Q ss_pred cCCCCccccCCCCC-CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCC
Q 018877 79 LLGVPVKTHDKSLK-LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLC 157 (349)
Q Consensus 79 ~~~~~~~~~~~~~~-lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~ 157 (349)
....... .+...+ ||++||||++ ++|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .
T Consensus 86 ~~~~~~~-~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~ 158 (314)
T 1by8_A 86 RSNDTLY-IPEWEGRAPDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--E 158 (314)
T ss_dssp CSSSSSB-CCCCSSCCCSCCBSTTT----TCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--T
T ss_pred cCCcccc-ccccccCCCCeEeCCCC----CCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--C
Confidence 1101111 111224 9999999987 789999999999999999999999999999999999999999999985 4
Q ss_pred CCCCCCCchHHHHHHHH-HcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCH
Q 018877 158 GDGCDGGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDP 234 (349)
Q Consensus 158 ~~gC~GG~~~~a~~~~~-~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~ 234 (349)
+.||+||++..|++|+. +.|+++|++|||.+.. ..|..... ...+.+.+|. ++ .++
T Consensus 159 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~ 217 (314)
T 1by8_A 159 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-----------------ESCMYNPT----GKAAKCRGYREIPEGNE 217 (314)
T ss_dssp SCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSCEEECCSSCH
T ss_pred CCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCC-----------------CCcCCCCc----cceeEECcEEEecCCCH
Confidence 68999999999999998 5799999999996541 12322111 1234566776 55 488
Q ss_pred HHHHHHHHhCCCEEEEEEcc-cccccCCCceeecCC-CCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEE
Q 018877 235 EDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHIT-GDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIK 312 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~-~~f~~y~~Giy~~~~-~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 312 (349)
++||++|+++|||+|+|+++ ++|++|++|||..+. +...++|||+||||| +++|++|||||||||++||++|||||+
T Consensus 218 ~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~ 296 (314)
T 1by8_A 218 KALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-IQKGNKHWIIKNSWGENWGNKGYILMA 296 (314)
T ss_dssp HHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEE-EETTEEEEEEECSBTTTSTBTTEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEe-ccCCceEEEEEcCCCCCcCcCCEEEEE
Confidence 99999999999999999997 689999999999874 444689999999999 668999999999999999999999999
Q ss_pred ecC-CccccccceeEee
Q 018877 313 RGS-NECGIEEDVVAGL 328 (349)
Q Consensus 313 ~g~-n~cgI~~~~~~~~ 328 (349)
||. |.|||++.+.+++
T Consensus 297 r~~~n~CgI~~~~~~p~ 313 (314)
T 1by8_A 297 RNKNNACGIANLASFPK 313 (314)
T ss_dssp CSSSCGGGTTSSCEEEC
T ss_pred cCCCCcCCccCeeEEee
Confidence 995 9999999988664
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=5.1e-75 Score=544.54 Aligned_cols=291 Identities=27% Similarity=0.515 Sum_probs=239.2
Q ss_pred HHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCC---CCCeEEecCCCCCCCCHHHHHH-hhC-CCCCCCCCc
Q 018877 8 SNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLG-VKPTPKGLL 79 (349)
Q Consensus 8 ~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~---~~~~~~~~n~~fsd~t~eE~~~-~~~-~~~~~~~~~ 79 (349)
..|+.|+++|.|. .+..|...| .+|.++ +|++||++. +.+|++++| +|+|||.+||++ ++| .........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~F~Dlt~eEf~~~~~g~~~~~~~~~~ 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLN-QFTDMTFEEFKAKYLTEMSRASDILS 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCC-TTTTSCHHHHHHHHCCCCCCGGGGSC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEecc-ccCCCCHHHHHHHhcCCCCCcccccc
Confidence 5799999999998 566788889 999985 699999852 579999999 999999999997 566 432211110
Q ss_pred CCCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCC
Q 018877 80 LGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGD 159 (349)
Q Consensus 80 ~~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~ 159 (349)
....+.. ...+||++||||++ ++|+||||||.||||||||++++||++++|+++..+.||+|+|+||+....+.
T Consensus 81 ~~~~~~~--~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~ 154 (310)
T 2o6x_A 81 HGVPYEA--NNRAVPDKIDWRES----GYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNN 154 (310)
T ss_dssp SSEECCC------CCSCEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCC
T ss_pred cCCcccc--ccCCCCCeEecCcC----CCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCC
Confidence 1011111 11369999999997 78999999999999999999999999999999999999999999998532368
Q ss_pred CCCCCchHHHHHHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHH
Q 018877 160 GCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDI 237 (349)
Q Consensus 160 gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~i 237 (349)
||+||++..|++|+.+.|+++|++|||.+.. ..|..... ...+.+.+|. ++ .++++|
T Consensus 155 gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~i 213 (310)
T 2o6x_A 155 GCGGGLMENAYQYLKQFGLETESSYPYTAVE-----------------GQCRYNKQ----LGVAKVTGFYTVHSGSEVEL 213 (310)
T ss_dssp GGGCCCHHHHHHHHTTSCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCEEEEEEEEECSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHCCcCchhcCCCCCCC-----------------CCccCCCC----CCceEeCeEEEeCCCCHHHH
Confidence 9999999999999998899999999996541 12332111 2345677776 65 588999
Q ss_pred HHHHHhCCCEEEEEEcccccccCCCceeecCCC-CccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC-
Q 018877 238 MAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS- 315 (349)
Q Consensus 238 k~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~-~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~- 315 (349)
|++|+++|||+|+|+++++|++|++|||.++.+ ...++|||+||||| +++|++|||||||||++||++|||||+|+.
T Consensus 214 ~~~l~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~ 292 (310)
T 2o6x_A 214 KNLVGAEGPAAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYG-TQGGTDYWIVKNSWGLSWGERGYIRMVRNRG 292 (310)
T ss_dssp HHHHHHHCCEEEEECCCHHHHTEEEEEECCSSCCTTCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSS
T ss_pred HHHHHhcCCeEEEEecchhhhhCCCceecCCCCCCCCCCEEEEEEEEe-ccCCceEEEEEeCCCCccCCCcEEEEEcCCC
Confidence 999999999999999988999999999987643 34679999999999 678999999999999999999999999998
Q ss_pred CccccccceeEee
Q 018877 316 NECGIEEDVVAGL 328 (349)
Q Consensus 316 n~cgI~~~~~~~~ 328 (349)
|.|||++.+.+++
T Consensus 293 n~Cgi~~~~~~p~ 305 (310)
T 2o6x_A 293 NMCGIASLASLPM 305 (310)
T ss_dssp SGGGTTTSEEEEE
T ss_pred CcCCccceeeEEE
Confidence 8999999988765
No 9
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.5e-74 Score=542.19 Aligned_cols=292 Identities=25% Similarity=0.449 Sum_probs=239.9
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCCCCCeEEecCCCCCCCCHHHHHHh-hCCCCCCCCCcCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKHL-LGVKPTPKGLLLG 81 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~~-~~~~~~~~~~~~~ 81 (349)
++..|+.|+++|.|. .+..|...|+.+|.++ +|++||++ +.+|++++| +|+|||.+||+++ ++..+........
T Consensus 18 ~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~~~~ 95 (322)
T 1pci_A 18 LIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLN-EFADLSNDEFNEKYVGSLIDATIEQSY 95 (322)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSC-TTTTSCHHHHHHHHCCCBCCCSSCCCC
T ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecC-ccccCCHHHHHHHhcCCCCcccccccc
Confidence 456899999999999 5778999999999984 79999985 679999999 9999999999984 4554322111111
Q ss_pred CCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCC
Q 018877 82 VPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGC 161 (349)
Q Consensus 82 ~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC 161 (349)
..........+||++||||++ ++|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||
T Consensus 96 ~~~~~~~~~~~lP~~~DwR~~----g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC 169 (322)
T 1pci_A 96 DEEFINEDIVNLPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGC 169 (322)
T ss_dssp SEECCCCCCCCSCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGG
T ss_pred ccccccccccCCCCeEecccC----CCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CCCCC
Confidence 110111123479999999987 789999999999999999999999999999999999999999999985 46899
Q ss_pred CCCchHHHHHHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-CHHHHHH
Q 018877 162 DGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-DPEDIMA 239 (349)
Q Consensus 162 ~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-~~~~ik~ 239 (349)
+||++..|++|+.++|+++|++|||.+.. ..|..... ....+.+.+|. ++. ++++||+
T Consensus 170 ~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~---~~~~~~i~~~~~v~~~~e~~l~~ 229 (322)
T 1pci_A 170 KGGYPPYALEYVAKNGIHLRSKYPYKAKQ-----------------GTCRAKQV---GGPIVKTSGVGRVQPNNEGNLLN 229 (322)
T ss_dssp GCBCHHHHHHHHHHHCBCBTTTSCCCSSC-----------------CCCTTTTC---CSCCBCCCCEEECCSSBHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCchhhCCCCCCC-----------------CCCCCCCC---CCceEEEeeEEEeCCCcHHHHHH
Confidence 99999999999999999999999996541 12322110 01234566776 553 7889999
Q ss_pred HHHhCCCEEEEEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC---
Q 018877 240 EIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS--- 315 (349)
Q Consensus 240 ~l~~~gPV~v~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~--- 315 (349)
+|++ |||+|+|+++ ++|++|++|||.++++. ..+|||+||||| +++|++|||||||||++||++|||||+||.
T Consensus 230 ~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~ 306 (322)
T 1pci_A 230 AIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGT-KVDGAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNS 306 (322)
T ss_dssp HHHH-SCEEEEECTTCHHHHTEEEEEECCSCCS-CCCEEEEEEEEE-EETTEEEEEEECSBCSSSTBTTEEEEECCCSBS
T ss_pred HHHH-CCEEEEEecccccccccCCeEeCCCCCC-CCCEEEEEEEEe-ccCCccEEEEEeCCCCcccCCeEEEEEcCCCCC
Confidence 9987 9999999997 79999999999876654 469999999999 677999999999999999999999999996
Q ss_pred -CccccccceeEee
Q 018877 316 -NECGIEEDVVAGL 328 (349)
Q Consensus 316 -n~cgI~~~~~~~~ 328 (349)
|.|||++.+.+++
T Consensus 307 ~n~CgI~~~~~yp~ 320 (322)
T 1pci_A 307 PGVCGLYKSSYYPT 320 (322)
T ss_dssp SCGGGGGGCCEEEC
T ss_pred CCcCCcccceeEEE
Confidence 8999999988764
No 10
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.6e-73 Score=541.32 Aligned_cols=288 Identities=25% Similarity=0.454 Sum_probs=231.5
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCCCCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCCcC-
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLL- 80 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~~~- 80 (349)
|..+|+.|+++|+|. .+.+|...|+.+|.++ +|++||+ .+.+|++++| +|+|||.+||++ +++..+.......
T Consensus 62 ~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~-~~~sy~~g~N-~FaDlT~eEf~~~~~~~~~~~~~~~~~ 139 (363)
T 3tnx_A 62 LIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK-KNNSYWLGLN-VFADMSNDEFKEKYTGSIAGNYTTTEL 139 (363)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT-SCCSEEECSC-TTTTSCHHHHHHHHSCSSCSCCCCSSS
T ss_pred HHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEecc-ccccCCHHHHHHHhccccccccccccc
Confidence 457899999999998 6788999999999985 6899998 4679999999 999999999997 5555433222111
Q ss_pred CCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCC
Q 018877 81 GVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDG 160 (349)
Q Consensus 81 ~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~g 160 (349)
...........+||++||||++ |+|+||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.|
T Consensus 140 ~~~~~~~~~~~~lP~s~DWR~~----g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~--~~~G 213 (363)
T 3tnx_A 140 SYEEVLNDGDVNIPEYVDWRQK----GAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR--RSYG 213 (363)
T ss_dssp SSSCCCCCSCCCCCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCT
T ss_pred ccccccCcccCCCCcceecccC----CCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC--CCCC
Confidence 1111112234589999999998 789999999999999999999999999999999999999999999986 4689
Q ss_pred CCCCchHHHHHHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHH
Q 018877 161 CDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIM 238 (349)
Q Consensus 161 C~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik 238 (349)
|+||++..|++|+.+.|+++|++|||.+..+ .|...+.. .....+..+. +. .++..++
T Consensus 214 C~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~~-------------~c~~~~~~-------~~~~~~~~~~~~~~~~e~~l~ 273 (363)
T 3tnx_A 214 CNGGYPWSALQLVAQYGIHYRNTYPYEGVQR-------------YCRSREKG-------PYAAKTDGVRQVQPYNEGALL 273 (363)
T ss_dssp TBCCCHHHHHHHHHHTCBCBTTTSCCCSSCC-------------CCCGGGGC-------SCSBCCCEEEEECSSCHHHHH
T ss_pred CCCCChHHHHhHHHhcCccccccCCCcCcCC-------------CcccCCCC-------CceeeccceEEcchhhHHHHH
Confidence 9999999999999999999999999965421 11111110 1123344454 44 4555555
Q ss_pred HHHHhCCCEEEEEEc-ccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC--
Q 018877 239 AEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-- 315 (349)
Q Consensus 239 ~~l~~~gPV~v~i~v-~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-- 315 (349)
.+| ..|||+|+|++ .++|++|++|||..+++.. .||||+||||| ++|||||||||++|||+|||||+||.
T Consensus 274 ~~v-~~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~-lnHaV~iVGyG-----~~YWIVKNSWGt~WGe~GY~rI~Rg~~~ 346 (363)
T 3tnx_A 274 YSI-ANQPVSVVLEAAGKDFQLYRGGIFVGPCGNK-VDHAVAAVGYG-----PNYILIRNSWGTGWGENGYIRIKRGTGN 346 (363)
T ss_dssp HHH-TTSCEEEEECCCSHHHHTEEEEEECCCCCSC-CCEEEEEEEEE-----TTEEEEECSBCTTSTBTTEEEEECCSCC
T ss_pred HHH-HcCCcEEEEEecchhhhCCCCCEECCCCCCC-CCeEEEEEEcC-----CCcEEEEeCCCCccccCcEEEEEcCCCC
Confidence 555 67999999986 4789999999999887654 59999999999 35999999999999999999999987
Q ss_pred --CccccccceeEee
Q 018877 316 --NECGIEEDVVAGL 328 (349)
Q Consensus 316 --n~cgI~~~~~~~~ 328 (349)
|.|||++.+.+++
T Consensus 347 ~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 347 SYGVCGLYTSSFYPV 361 (363)
T ss_dssp SSCGGGTTSCEEEEE
T ss_pred CCCcCCccceeeecc
Confidence 4599999988765
No 11
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=3e-72 Score=525.14 Aligned_cols=285 Identities=24% Similarity=0.421 Sum_probs=234.2
Q ss_pred HHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCCCCCeEEecCCCCCCCCHHHHHH-hhCCCCCCCCCcCCCC
Q 018877 8 SNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLLGVP 83 (349)
Q Consensus 8 ~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~-~~~~~~~~~~~~~~~~ 83 (349)
..|+.|+++|.|. .+.+|...|+.+|.++ +|++ |+ + ++| +|+|||.+||++ +++............+
T Consensus 6 ~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~---g~N-~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~ 76 (312)
T 1xkg_A 6 KTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG----G---AIN-HLSDLSLDEFKNRFLMSAEAFEHLKTQFD 76 (312)
T ss_dssp CSHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C---CCC-TTTTSCHHHHHHHHSBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C---CCC-cccCCCHHHHHHHhcCCCCccccccCCcc
Confidence 4699999999999 5678999999999986 4666 53 2 999 999999999998 6663211100000001
Q ss_pred cccc----CCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCC
Q 018877 84 VKTH----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGD 159 (349)
Q Consensus 84 ~~~~----~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~ 159 (349)
.... ....+||++||||++ |+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. ..
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~ 149 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QH 149 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SS
T ss_pred cccccccccccccCCCccccccC----CCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CC
Confidence 1000 012379999999997 789999999999999999999999999999999999999999999983 27
Q ss_pred CCCCCchHHHHHHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHH
Q 018877 160 GCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDI 237 (349)
Q Consensus 160 gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~i 237 (349)
||+||++..|++|+.+.|+++|++|||.+.. ..|. ... ...+.+.+|. ++ .++++|
T Consensus 150 GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~-~~~----~~~~~i~~y~~v~~~~~~~i 207 (312)
T 1xkg_A 150 GCHGDTIPRGIEYIQHNGVVQESYYRYVARE-----------------QSCR-RPN----AQRFGISNYCQIYPPNANKI 207 (312)
T ss_dssp TTBCCCHHHHHHHHHHHCEEBGGGSCCCSSC-----------------CCCC-CCS----SCEECCSEEEECCSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCccccCCccCCC-----------------CCCC-CCC----CceEEEeeEEEeCCCCHHHH
Confidence 9999999999999999999999999996541 1233 111 2346777886 65 488999
Q ss_pred HHHHHh-CCCEEEEEEccc--ccccCCCceeecCCCC--ccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEE
Q 018877 238 MAEIYK-NGPVEVSFTVYE--DFAHYKSGVYKHITGD--VMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIK 312 (349)
Q Consensus 238 k~~l~~-~gPV~v~i~v~~--~f~~y~~Giy~~~~~~--~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 312 (349)
|++|++ +|||+|+|++++ +|++|++|||..+.+. .. +|||+||||| +++|++|||||||||++||++|||||+
T Consensus 208 k~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~ 285 (312)
T 1xkg_A 208 REALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYS-NAQGVDYWIVRNSWDTNWGDNGYGYFA 285 (312)
T ss_dssp HHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHhcCCCEEEEEEecccccccccCCcEEcCCCCCCCcC-ceEEEEEEEe-ccCCceEEEEEeCCCCcccCCcEEEEE
Confidence 999999 999999999987 8999999999986553 36 9999999999 778999999999999999999999999
Q ss_pred ecCCccccccceeEeecCCC
Q 018877 313 RGSNECGIEEDVVAGLPSSK 332 (349)
Q Consensus 313 ~g~n~cgI~~~~~~~~p~~~ 332 (349)
|+.|.|||++.+++++|..+
T Consensus 286 r~~n~CgI~~~~~~~~~~~~ 305 (312)
T 1xkg_A 286 ANIDLMMIEEYPYVVILGQT 305 (312)
T ss_dssp CSSCGGGTTTCCEEEECTTC
T ss_pred cCCCcccccceeEEeeccCC
Confidence 99999999999999998654
No 12
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=7.3e-71 Score=535.94 Aligned_cols=284 Identities=32% Similarity=0.641 Sum_probs=182.3
Q ss_pred ccccccccccHHH--HHHHHHhCCCCCeEEe-cCCCCCCCCHHHHHHhhCC-CCCCCCCc-CCCCccccCCCCCCCCcee
Q 018877 24 SKLKLDSHILQDS--IIKEVNENPKAGWKAA-RNPQFSNYTVGQFKHLLGV-KPTPKGLL-LGVPVKTHDKSLKLPKSFD 98 (349)
Q Consensus 24 ~e~~~r~~~~~~~--~i~~~n~~~~~~~~~~-~n~~fsd~t~eE~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~lP~s~D 98 (349)
.+...|+.+|.++ +|++||+. +.+|+++ +| +|+|||.+||+++++. +....... ............+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n-~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYM-EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeeccc-ccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEE
Confidence 4567899999985 79999984 5799998 67 9999999999985543 22111100 0011011123457999999
Q ss_pred cCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ccCCHHHHHHhcCCCCCCCCCCCchHHH-HHHHHH
Q 018877 99 ARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMN--LSLSVNDLLACCGFLCGDGCDGGYPISA-WRYFVH 175 (349)
Q Consensus 99 ~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~--~~lS~q~l~dc~~~~~~~gC~GG~~~~a-~~~~~~ 175 (349)
||+.+ ++++|+||||||.||||||||++++||++++|+++.. +.||+|+|+||+. .+.||+||++..+ ++|+++
T Consensus 213 wR~~~-g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~~ 289 (441)
T 3pdf_A 213 WRNVH-GINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQD 289 (441)
T ss_dssp TTCBT-TBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHHH
T ss_pred CCcCC-CCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHHh
Confidence 99962 3457999999999999999999999999999999865 4599999999986 4789999999987 899999
Q ss_pred cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-e-----CCCHHHHHHHHHhCCCEEE
Q 018877 176 HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-I-----NSDPEDIMAEIYKNGPVEV 249 (349)
Q Consensus 176 ~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~-----~~~~~~ik~~l~~~gPV~v 249 (349)
.||++|++|||.+.. . .|..... ...+.+..|. + ..++++||++|+++|||+|
T Consensus 290 ~Gi~tE~~yPY~~~~----~-------------~C~~~~~----~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsv 348 (441)
T 3pdf_A 290 FGLVEEACFPYTGTD----S-------------PCKMKED----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAV 348 (441)
T ss_dssp TCBCBGGGSCCCSSC----C-------------CSCCCSS----CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEE
T ss_pred cCCCcHHHeeecccC----C-------------CCCCccc----cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEE
Confidence 999999999996541 1 1221110 1112334444 3 2578999999999999999
Q ss_pred EEEcccccccCCCceeecCCCC------ccCCcEEEEEEeCCC-CCCccEEEEEccCCCCCCCCceEEEEecCCcccccc
Q 018877 250 SFTVYEDFAHYKSGVYKHITGD------VMGGHAVKLIGWGTS-DDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEE 322 (349)
Q Consensus 250 ~i~v~~~f~~y~~Giy~~~~~~------~~~~Hav~IVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~ 322 (349)
+|+++++|++|++|||.++.+. ..++|||+|||||++ ++|++|||||||||++||++|||||+||.|+|||++
T Consensus 349 ai~a~~~F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s 428 (441)
T 3pdf_A 349 AFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIES 428 (441)
T ss_dssp EECCCGGGGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTS
T ss_pred EEEecccccccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCC
Confidence 9999999999999999876542 357999999999954 479999999999999999999999999999999999
Q ss_pred ceeEeecCCCC
Q 018877 323 DVVAGLPSSKN 333 (349)
Q Consensus 323 ~~~~~~p~~~~ 333 (349)
.+++++|..+.
T Consensus 429 ~~~a~~P~~~~ 439 (441)
T 3pdf_A 429 IAVAATPIPKL 439 (441)
T ss_dssp CCEEEEECCCC
T ss_pred ceEEeeccCCC
Confidence 99999987653
No 13
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=2.8e-68 Score=489.99 Aligned_cols=246 Identities=53% Similarity=1.161 Sum_probs=206.4
Q ss_pred CCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCccCCHHHHHHhcCCCCCCCCCCCchHH
Q 018877 91 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPIS 168 (349)
Q Consensus 91 ~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~--~~~~lS~q~l~dc~~~~~~~gC~GG~~~~ 168 (349)
.+||++||||++|++++.++||||||.||||||||++++||++++|+++ ..+.||+|+|+||.....+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 4799999999999999999999999999999999999999999999876 57999999999998522468999999999
Q ss_pred HHHHHHHcCcCC-------CCcccCCCCCCC------CCCCCCCCCCCcccccccccccc-ccccceeeeeeeeEeCCCH
Q 018877 169 AWRYFVHHGVVT-------EECDPYFDSTGC------SHPGCEPAYPTPKCVRKCVKKNQ-LWRNSKHYSISAYRINSDP 234 (349)
Q Consensus 169 a~~~~~~~Gi~~-------e~~yPY~~~~~~------~~~~c~~~~~~~~~~~~c~~~~~-~~~~~~~~~i~~~~~~~~~ 234 (349)
||+|+.++|+++ |++|||... .| ....|.....++.|...|..... .+...+.+.+..|.++.++
T Consensus 85 a~~y~~~~Gi~~~~~Y~~~e~~~PY~~~-~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (266)
T 3cbj_A 85 AWNFWTRKGLVSGGLYESHVGCRPYSIP-PCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSE 163 (266)
T ss_dssp HHHHHHHTCBCBCCSTTCCCSSSCCCSC-CCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCH
T ss_pred HHHHHHHhCcCcCccccccccccCcccc-cccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCH
Confidence 999999999999 999999632 12 23455544456667777754221 1222334445556676789
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEec
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG 314 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g 314 (349)
++||++|+++|||+|+|+++++|++|++|||.++++...++|||+||||| +++|++|||||||||++||++|||||+||
T Consensus 164 ~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~rg 242 (266)
T 3cbj_A 164 KDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWG-VENGTPYWLVANSWNTDWGDNGFFKILRG 242 (266)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred HHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEec-ccCCceEEEEEcCCCCccCCCCEEEEEcC
Confidence 99999999999999999998899999999999877766679999999999 77899999999999999999999999999
Q ss_pred CCccccccceeEeecCCCCcchhc
Q 018877 315 SNECGIEEDVVAGLPSSKNLVKEI 338 (349)
Q Consensus 315 ~n~cgI~~~~~~~~p~~~~~~~~~ 338 (349)
.|.|||++.+++++|+++|+-|+|
T Consensus 243 ~n~cgI~~~~~~~~p~~~~~~~~~ 266 (266)
T 3cbj_A 243 QDHCGIESEVVAGIPRTDQYWEKI 266 (266)
T ss_dssp SCGGGTTTSCEECCBCCCC-----
T ss_pred CCcccccCceEEEEeeccchhccC
Confidence 999999999999999999998765
No 14
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2.1e-66 Score=474.57 Aligned_cols=236 Identities=52% Similarity=1.090 Sum_probs=201.0
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCccCCHHHHHHhcCCCCCCCCCCCchHHH
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPISA 169 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~--~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a 169 (349)
+||++||||++|++|++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. ..+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~-~~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCE-SCGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCT-TSBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhc-CCCCCCCCCCHHHH
Confidence 699999999999999999999999999999999999999999999986 789999999999986 34689999999999
Q ss_pred HHHHHHcCcCCCCcc-------cCCCCCCC------CCCCCCC-CCCCccccccccccccc-cccceeeeeeeeEeCCCH
Q 018877 170 WRYFVHHGVVTEECD-------PYFDSTGC------SHPGCEP-AYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDP 234 (349)
Q Consensus 170 ~~~~~~~Gi~~e~~y-------PY~~~~~~------~~~~c~~-~~~~~~~~~~c~~~~~~-~~~~~~~~i~~~~~~~~~ 234 (349)
|+|++++|+++|++| ||... .| ....|.. ...++.|...|...... +...+.+....|.+..++
T Consensus 81 ~~yi~~~Gi~~e~~y~~~~~c~PY~~~-~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (254)
T 3qsd_A 81 WDYWVKEGIVTGSSKENHAGCEPYPFP-KCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDE 159 (254)
T ss_dssp HHHHHHTCBCBCCCTTTCCSSSCCSSC-CCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCH
T ss_pred HHHHHHcCCCcccccccCcCcCCcccc-cccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcH
Confidence 999999999998888 99521 11 1223422 12345666677654321 333334444556677789
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEec
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG 314 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g 314 (349)
++||++|+++|||+++|+++++|++|++|||..+++...++|||+||||| ++++++|||||||||++||++|||||+||
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~rg 238 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWG-VENKAPYWLIANSWNEDWGENGYFRIVRG 238 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred HHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEe-ecCCeeEEEEEeCCCCCcccCCeEEEEcC
Confidence 99999999999999999999999999999999888777789999999999 78899999999999999999999999999
Q ss_pred CCccccccceeEeecC
Q 018877 315 SNECGIEEDVVAGLPS 330 (349)
Q Consensus 315 ~n~cgI~~~~~~~~p~ 330 (349)
.|+|||++++++++|.
T Consensus 239 ~n~CgI~~~~~~~~p~ 254 (254)
T 3qsd_A 239 RDECSIESEVTAGRIN 254 (254)
T ss_dssp SCGGGTTSSEEEEECC
T ss_pred CCeecCCCceEeeccC
Confidence 9999999999999984
No 15
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.4e-64 Score=450.81 Aligned_cols=212 Identities=33% Similarity=0.677 Sum_probs=186.2
Q ss_pred CCCceecCcCCCCCC-CCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018877 93 LPKSFDARSAWPQCS-TISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 93 lP~s~D~R~~w~~~~-~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 171 (349)
||++||||++ + +++||||||.||||||||++++||++++++++..+.||+|+|++|.....+.||+||++..|++
T Consensus 1 lP~~~DwR~~----~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 76 (220)
T 8pch_A 1 YPPSMDWRKK----GNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFE 76 (220)
T ss_dssp CCSCEEHHHH----SSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHH
T ss_pred CCCCEecCcC----CCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHH
Confidence 7999999998 5 7999999999999999999999999999999999999999999998634468999999999999
Q ss_pred HHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEE
Q 018877 172 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 248 (349)
Q Consensus 172 ~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~ 248 (349)
|+.++ |+++|++|||.... ..|..... ...+.+..|. +. .++++||++|+++|||+
T Consensus 77 ~~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~ 135 (220)
T 8pch_A 77 YIRYNKGIMGEDTYPYKGQD-----------------DHCKFQPD----KAIAFVKDVANITMNDEEAMVEAVALYNPVS 135 (220)
T ss_dssp HHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECEEEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred HHHHcCCcCcccccCccCCC-----------------CCCCCCCC----cceEEeCCEEEeCCCCHHHHHHHHHhcCCEE
Confidence 99987 99999999996541 12332211 2345666776 54 57899999999999999
Q ss_pred EEEEcccccccCCCceeecCCCCc---cCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCcccccccee
Q 018877 249 VSFTVYEDFAHYKSGVYKHITGDV---MGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 325 (349)
Q Consensus 249 v~i~v~~~f~~y~~Giy~~~~~~~---~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~ 325 (349)
++|+++++|++|++|||..+.+.. .++|||+||||| ++++++|||||||||++||++|||||+||.|+|||++++.
T Consensus 136 ~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~ 214 (220)
T 8pch_A 136 FAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 214 (220)
T ss_dssp EEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCE
T ss_pred EEEEeccchhhcCCCcccCCcCCCCCCcCCcEEEEEEEE-ccCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCce
Confidence 999998899999999998765432 579999999999 7789999999999999999999999999999999999999
Q ss_pred EeecC
Q 018877 326 AGLPS 330 (349)
Q Consensus 326 ~~~p~ 330 (349)
+++|.
T Consensus 215 ~~~p~ 219 (220)
T 8pch_A 215 YPIPL 219 (220)
T ss_dssp EEEEC
T ss_pred eEeec
Confidence 99986
No 16
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.5e-63 Score=446.34 Aligned_cols=211 Identities=30% Similarity=0.626 Sum_probs=183.0
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.....+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y 76 (220)
T 2xu3_A 1 APRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY 76 (220)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHH
Confidence 7999999997 779999999999999999999999999999999999999999999986334689999999999999
Q ss_pred HH-HcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEEEE
Q 018877 173 FV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~-~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~ 250 (349)
+. +.|+++|++|||.+.. ..|..... ...+++..|. ++.++++||++|+++|||+++
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~ 135 (220)
T 2xu3_A 77 VQDNGGLDSEESYPYEATE-----------------ESCKYNPK----YSVANDTGFVDIPKQEKALMKAVATVGPISVA 135 (220)
T ss_dssp HHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCSEEEECCSCHHHHHHHHHHTCCEEEE
T ss_pred HHHhCCcccccccCCcccC-----------------cCccCCCC----CcceeeeeEEEeCCCHHHHHHHHHhcCCEEEE
Confidence 96 7899999999996541 12332211 2345677776 655889999999999999999
Q ss_pred EEcc-cccccCCCceeecCC-CCccCCcEEEEEEeCC---CCCCccEEEEEccCCCCCCCCceEEEEecC-Cccccccce
Q 018877 251 FTVY-EDFAHYKSGVYKHIT-GDVMGGHAVKLIGWGT---SDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDV 324 (349)
Q Consensus 251 i~v~-~~f~~y~~Giy~~~~-~~~~~~Hav~IVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~~ 324 (349)
|+++ ++|++|++|||..+. +...++|||+|||||+ ++++++|||||||||++||++|||||+|+. |+|||++++
T Consensus 136 ~~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~ 215 (220)
T 2xu3_A 136 IDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAA 215 (220)
T ss_dssp ECCCSHHHHTCCSSEECCTTCCSSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSC
T ss_pred EeecCcccccccceEEcCCCCCCCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccc
Confidence 9998 589999999998874 3446899999999994 457899999999999999999999999997 899999998
Q ss_pred eEee
Q 018877 325 VAGL 328 (349)
Q Consensus 325 ~~~~ 328 (349)
.+++
T Consensus 216 ~~p~ 219 (220)
T 2xu3_A 216 SYPT 219 (220)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8764
No 17
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.9e-63 Score=444.08 Aligned_cols=209 Identities=30% Similarity=0.634 Sum_probs=180.6
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~Dwr~~----g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (215)
T 3i06_A 1 APAAVDWRAR----GAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEW 74 (215)
T ss_dssp CCSEEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHH
T ss_pred CCCcccCCcC----CCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHc---CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEE
Q 018877 173 FVHH---GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVE 248 (349)
Q Consensus 173 ~~~~---Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~ 248 (349)
+.++ |+++|++|||.+..+ ..+ .|..... ...+++..|. ++.++++||++|+++|||+
T Consensus 75 ~~~~~~gGi~~e~~yPY~~~~~----------~~~----~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~ 136 (215)
T 3i06_A 75 IVQENNGAVYTEDSYPYASGEG----------ISP----PCTTSGH----TVGATITGHVELPQDEAQIAAWLAVNGPVA 136 (215)
T ss_dssp HHHHSTTEEEC-CCSCCCCTTS----------CCC----CCCCSSC----CEEEEEEEEEECCSCHHHHHHHHHHHCCEE
T ss_pred HHHhccccccccCccCCcCCCC----------CCC----ccccCCc----ccceEecceEEeCChHHHHHHHHHHCCCEE
Confidence 9986 699999999965421 011 2332211 2345677776 7778999999999999999
Q ss_pred EEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCccccccceeEee
Q 018877 249 VSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 328 (349)
Q Consensus 249 v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~ 328 (349)
++|++ ++|++|++|||..+. ...++|||+||||| ++++++|||||||||++||++|||||+||.|+|||++++++++
T Consensus 137 v~~~~-~~f~~Y~~Giy~~~~-~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~ 213 (215)
T 3i06_A 137 VAVDA-SSWMTYTGGVMTSCV-SEQLDHGVLLVGYN-DSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAV 213 (215)
T ss_dssp EEECC-TTGGGCCSSEECSCC-CSCCCEEEEEEEEE-SSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEE
T ss_pred EEEEc-hHHhcCCCCcccCCC-CCccCcEEEEEEEe-ccCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEe
Confidence 99999 789999999998643 34469999999999 7889999999999999999999999999999999999999876
No 18
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-63 Score=445.42 Aligned_cols=208 Identities=28% Similarity=0.631 Sum_probs=179.9
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (214)
T 1m6d_A 1 APPEWDWRSK----GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSA 74 (214)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 3689999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++ |+++|++|||.+.. ..|..... ...+.+..+. ++.++++||++|+++|||+|+
T Consensus 75 i~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~ 133 (214)
T 1m6d_A 75 IKNLGGLETEDDYSYQGHM-----------------QSCQFSAE----KAKVYIQDSVELSQNEQKLAAWLAKRGPISVA 133 (214)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEE
T ss_pred HHHhcCcccccCcCcCCCC-----------------CcCCCCcc----cceEEecCEEEeChHHHHHHHHHHhCCCEEEE
Confidence 9886 89999999996541 12332211 1123455555 667889999999999999999
Q ss_pred EEcccccccCCCceeecC---CCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCccccccceeEe
Q 018877 251 FTVYEDFAHYKSGVYKHI---TGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 327 (349)
Q Consensus 251 i~v~~~f~~y~~Giy~~~---~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~ 327 (349)
|+++ +|++|++|||..+ +....++|||+||||| +++|++|||||||||++||++|||||+||.|.|||++.+.++
T Consensus 134 i~~~-~f~~Y~~Giy~~~~~~c~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~ 211 (214)
T 1m6d_A 134 INAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYG-QRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSA 211 (214)
T ss_dssp ECTH-HHHHCCSSEECCCGGGSCTTCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEE
T ss_pred EEec-hhhhcCCceecCCCCcCCCCcCCEEEEEEEEe-ecCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEE
Confidence 9997 5999999999863 3344679999999999 778899999999999999999999999999999999999987
Q ss_pred ec
Q 018877 328 LP 329 (349)
Q Consensus 328 ~p 329 (349)
++
T Consensus 212 ~~ 213 (214)
T 1m6d_A 212 VV 213 (214)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 19
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.8e-63 Score=444.55 Aligned_cols=208 Identities=32% Similarity=0.665 Sum_probs=182.7
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.. .+.||+||++..|++|
T Consensus 1 lP~~~Dwr~~----~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~ 74 (215)
T 3kwz_A 1 APDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQY 74 (215)
T ss_dssp CTTCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCCCccCcC----CCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999987 789999999999999999999999999999999999999999999986 4689999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-CHHHHHHHHHhCCCEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-DPEDIMAEIYKNGPVEV 249 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-~~~~ik~~l~~~gPV~v 249 (349)
+.++ |+++|++|||.+.. ..|..... ....++..|. ++. ++++||++|+++|||++
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v 133 (215)
T 3kwz_A 75 VQKNRGIDSEDAYPYVGQE-----------------ESCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVGPVSV 133 (215)
T ss_dssp HHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCCEEECCTTCHHHHHHHHHHTCCEEE
T ss_pred HHHhCCccccccCCCccCC-----------------CccccCCC----CceeEecceEEeCCCCHHHHHHHHHHCCCEEE
Confidence 9887 99999999996541 12332211 2345667776 543 88999999999999999
Q ss_pred EEEcc-cccccCCCceeecCCC-CccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC-CccccccceeE
Q 018877 250 SFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVA 326 (349)
Q Consensus 250 ~i~v~-~~f~~y~~Giy~~~~~-~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~~~~ 326 (349)
+|+++ ++|++|++|||..+.+ ...++|||+||||| ++++++|||||||||++||++|||||+||. |+|||++.+.+
T Consensus 134 ~~~~~~~~f~~y~~Giy~~~~~~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~ 212 (215)
T 3kwz_A 134 AIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASF 212 (215)
T ss_dssp EECCCSHHHHTCCSSEECCTTCCTTCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEE
T ss_pred EEeechhhhhcccCCeECCCCCCCChhhCEEEEEEEe-ccCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceee
Confidence 99997 6999999999988765 45689999999999 778999999999999999999999999997 89999999886
Q ss_pred ee
Q 018877 327 GL 328 (349)
Q Consensus 327 ~~ 328 (349)
++
T Consensus 213 p~ 214 (215)
T 3kwz_A 213 PK 214 (215)
T ss_dssp EC
T ss_pred ee
Confidence 54
No 20
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3e-63 Score=444.07 Aligned_cols=210 Identities=30% Similarity=0.651 Sum_probs=183.8
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhc-CCCCCCCCCCCchHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACC-GFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~-~~~~~~gC~GG~~~~a~~ 171 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|. ....+.||+||++..|++
T Consensus 2 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~ 77 (218)
T 3ovx_A 2 LPDSVDWREK----GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQ 77 (218)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHH
T ss_pred CCCCCCcccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHH
Confidence 7999999997 78999999999999999999999999999999999999999999998 323468999999999999
Q ss_pred HHHH-cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEE
Q 018877 172 YFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 248 (349)
Q Consensus 172 ~~~~-~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~ 248 (349)
|+.+ .|+++|++|||.+.. ..|..... ....++..|. ++ .++++||++|+++|||+
T Consensus 78 ~~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~ 136 (218)
T 3ovx_A 78 YIIDNKGIDSDASYPYKAMD-----------------QKCQYDSK----YRAATCSKYTELPYGREDVLKEAVANKGPVS 136 (218)
T ss_dssp HHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred HHHHhCCcCcccccCccCCC-----------------CcccCCCc----cceeeeccEEEeCCCCHHHHHHHHHhcCCEE
Confidence 9976 799999999996541 13332221 3345667777 54 47899999999999999
Q ss_pred EEEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC-CccccccceeE
Q 018877 249 VSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVA 326 (349)
Q Consensus 249 v~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~~~~ 326 (349)
++|++. ++|++|++|||..+.+...++|||+||||| ++++++|||||||||++||++|||||+||. |.|||++.+.+
T Consensus 137 v~~~~~~~~f~~y~~Giy~~~~~~~~~~HaV~iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~ 215 (218)
T 3ovx_A 137 VGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 215 (218)
T ss_dssp EEECCCSHHHHHCCSSEECCTTCCSCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEE
T ss_pred EEEEecchhhhcccCceecCCCCCcccCcEEEEEEEe-ccCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceee
Confidence 999996 489999999999887777789999999999 777999999999999999999999999998 99999999886
Q ss_pred ee
Q 018877 327 GL 328 (349)
Q Consensus 327 ~~ 328 (349)
++
T Consensus 216 p~ 217 (218)
T 3ovx_A 216 PE 217 (218)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 21
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.4e-62 Score=440.11 Aligned_cols=212 Identities=33% Similarity=0.673 Sum_probs=182.7
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..++||+|+|++|.....+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 76 (220)
T 3p5u_A 1 LPDYVDWRSS----GAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQF 76 (220)
T ss_dssp CCSCEETTTT----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHH
T ss_pred CCCCCcCCcC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHH
Confidence 7999999987 789999999999999999999999999999999999999999999997433789999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 249 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v 249 (349)
+.++ |+++|++|||.... ..|..... ....+++..|. ++ .++++|+++| ++|||++
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~---~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v 135 (220)
T 3p5u_A 77 IINNGGINTEANYPYTAEE-----------------GQCNLDLQ---QEKYVSIDTYENVPYNNEWALQTAV-AYQPVSV 135 (220)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCHHHH---TCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEE
T ss_pred HHHhCCcCcccccccccCC-----------------CCcCcCCC---CCceEEEccEEEeCCCcHHHHHHHH-hcCCEEE
Confidence 9987 89999999996541 12332111 12235667776 54 4778888888 7899999
Q ss_pred EEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCC---cccccccee
Q 018877 250 SFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN---ECGIEEDVV 325 (349)
Q Consensus 250 ~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n---~cgI~~~~~ 325 (349)
+|+++ ++|++|++|||.+++... .+|||+||||| ++++++|||||||||++||++|||||+||.| .|||++.+.
T Consensus 136 ~~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~ 213 (220)
T 3p5u_A 136 ALEAAGYNFQHYSSGIFTGPCGTA-VDHAVTIVGYG-TEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKAS 213 (220)
T ss_dssp EECCCSHHHHTCCSSEECCCCCCS-CCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCE
T ss_pred EEecCchhhccccCceECCCCCCc-cceEEEEEEEe-cCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccc
Confidence 99996 689999999998865544 69999999999 8889999999999999999999999999987 999999999
Q ss_pred EeecCC
Q 018877 326 AGLPSS 331 (349)
Q Consensus 326 ~~~p~~ 331 (349)
++++..
T Consensus 214 ~p~~~~ 219 (220)
T 3p5u_A 214 YPVKYY 219 (220)
T ss_dssp EEECSC
T ss_pred eEEEec
Confidence 887654
No 22
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=2.5e-62 Score=444.98 Aligned_cols=212 Identities=31% Similarity=0.635 Sum_probs=181.8
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 171 (349)
+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++
T Consensus 1 ~lP~~~DwR~~----g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~ 74 (246)
T 2b1m_A 1 DAPESWDWSKK----GVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFE 74 (246)
T ss_dssp -CCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHH
T ss_pred CCCCcCCCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHH
Confidence 48999999997 789999999999999999999999999999999999999999999985 468999999999999
Q ss_pred HHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeee---E-eC-CCHHHHHHHHHh--
Q 018877 172 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY---R-IN-SDPEDIMAEIYK-- 243 (349)
Q Consensus 172 ~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~---~-~~-~~~~~ik~~l~~-- 243 (349)
|+.++ |+++|++|||.... ..|..... ...+++..| . ++ .++++||++|++
T Consensus 75 y~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~ 133 (246)
T 2b1m_A 75 WVVKHGGIASEADYPYKARD-----------------GKCKANEI----QDKVTIDNYGVQILSNESTESEAESSLQSFV 133 (246)
T ss_dssp HHHHTTCBCBTTTSCCCSSC-----------------CCCCGGGC----CCCBCCSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHhCCcCccccccccCCC-----------------CcCcCCCC----CCceeEcCcceeeecCCChHHHHHHHHHhhc
Confidence 99997 99999999996541 12332111 223456666 5 54 478899999998
Q ss_pred -CCCEEEEEEcccccccCCCceeecC-CCCcc-CCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----C
Q 018877 244 -NGPVEVSFTVYEDFAHYKSGVYKHI-TGDVM-GGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----N 316 (349)
Q Consensus 244 -~gPV~v~i~v~~~f~~y~~Giy~~~-~~~~~-~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n 316 (349)
+|||+++|++ ++|++|++|||..+ ++... ++|||+||||| +++|++|||||||||++||++|||||+|+. |
T Consensus 134 ~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n 211 (246)
T 2b1m_A 134 LEQPISVSIDA-KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYG-SEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLG 211 (246)
T ss_dssp HHSCEEEEECC-TTGGGCCSSEECCTTCCSSCCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTC
T ss_pred cCCCEEEEEEc-chhhcccceeecCCCCCCCCcCceEEEEEEEe-ccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCc
Confidence 6999999999 89999999999885 43333 79999999999 668999999999999999999999999998 8
Q ss_pred ccccccceeEeecCCC
Q 018877 317 ECGIEEDVVAGLPSSK 332 (349)
Q Consensus 317 ~cgI~~~~~~~~p~~~ 332 (349)
.|||++.+.+++....
T Consensus 212 ~CgI~~~~~~p~~~~~ 227 (246)
T 2b1m_A 212 VCGMNYFASYPIIEKS 227 (246)
T ss_dssp GGGTTSEEEEEECCC-
T ss_pred cccccceeeEEEecCC
Confidence 9999999998876543
No 23
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.3e-62 Score=437.31 Aligned_cols=207 Identities=30% Similarity=0.615 Sum_probs=179.6
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (216)
T 1ppo_A 1 LPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEY 74 (216)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHH
Confidence 7999999987 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++|+++|++|||.... . .|..... ....+++..|. ++ .++++||++|++ |||+++
T Consensus 75 i~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~ 133 (216)
T 1ppo_A 75 VAKNGIHLRSKYPYKAKQ-------------G----TCRAKQV---GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVV 133 (216)
T ss_dssp HHHHCBCBTTTSCCCSSC-------------C----CCCGGGC---CSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEE
T ss_pred HHHhCcCccccCCccCCC-------------C----CcCCCCC---CCceEEeccEEEECCCCHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 1 2322110 02345677776 55 478899999987 999999
Q ss_pred EEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Ccccccccee
Q 018877 251 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV 325 (349)
Q Consensus 251 i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~ 325 (349)
|+++ ++|++|++|||..+++.. .+|||+||||| +++|++|||||||||++||++|||||+|+. |.|||++++.
T Consensus 134 ~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~ 211 (216)
T 1ppo_A 134 VESKGRPFQLYKGGIFEGPCGTK-VDHAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY 211 (216)
T ss_dssp ECCCSHHHHHCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCE
T ss_pred EecCChhhhhcCCceECCCCCCC-CCEEEEEEEee-ccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCcccccee
Confidence 9996 799999999998766544 69999999999 677899999999999999999999999985 8999999988
Q ss_pred Eee
Q 018877 326 AGL 328 (349)
Q Consensus 326 ~~~ 328 (349)
+++
T Consensus 212 ~p~ 214 (216)
T 1ppo_A 212 YPT 214 (216)
T ss_dssp EEE
T ss_pred eEe
Confidence 764
No 24
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.2e-62 Score=441.34 Aligned_cols=208 Identities=28% Similarity=0.548 Sum_probs=182.7
Q ss_pred CCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHH
Q 018877 91 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 170 (349)
Q Consensus 91 ~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~ 170 (349)
.+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.. +.||+||++..|+
T Consensus 8 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~ 80 (222)
T 3f5v_A 8 GNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGI 80 (222)
T ss_dssp CCCCSCEEHHHH----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHH
T ss_pred cCCCCCCCCccC----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHH
Confidence 579999999997 789999999999999999999999999999999999999999999986 6899999999999
Q ss_pred HHHHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-e-CCCHHHHHHHHHh-CCCE
Q 018877 171 RYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-I-NSDPEDIMAEIYK-NGPV 247 (349)
Q Consensus 171 ~~~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~-~~~~~~ik~~l~~-~gPV 247 (349)
+|++++|+++|++|||.+.. ..|.... ...+++..|. + ..++++||++|++ +|||
T Consensus 81 ~~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV 138 (222)
T 3f5v_A 81 EYIQHNGVVQESYYRYVARE-----------------QSCRRPN-----AQRFGISNYCQIYPPNANKIREALAQTHSAI 138 (222)
T ss_dssp HHHHHHCEEBGGGSCCCSSC-----------------CCCCCCS-----SCEECCSEEEECCSCCHHHHHHHHHHHCCCE
T ss_pred HHHHHcCCCchhhCCCcccC-----------------CCccCCc-----CcceeeccEEEeCCCCHHHHHHHHHhcCCCE
Confidence 99999999999999996541 1233111 2345677777 5 4688999999999 9999
Q ss_pred EEEEEc--ccccccCCCceeecC-CCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCCccccccce
Q 018877 248 EVSFTV--YEDFAHYKSGVYKHI-TGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDV 324 (349)
Q Consensus 248 ~v~i~v--~~~f~~y~~Giy~~~-~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~ 324 (349)
+|+|.+ .++|++|++|||..+ ++...++|||+||||| +++|++|||||||||++||++|||||+||.|.|||++.+
T Consensus 139 ~v~~~~~~~~~f~~Y~~gi~~~~~~~~~~~~HaV~iVGyg-~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~ 217 (222)
T 3f5v_A 139 AVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYS-NAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYP 217 (222)
T ss_dssp EEEEEESCHHHHHTCCSSSCBCCCCSSSCEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSC
T ss_pred EEEEEeccchhhhccCCCceecCCCCCCccCcEEEEEEEe-ccCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCce
Confidence 999998 468999999987544 4456689999999999 778999999999999999999999999999999999999
Q ss_pred eEee
Q 018877 325 VAGL 328 (349)
Q Consensus 325 ~~~~ 328 (349)
++++
T Consensus 218 ~~p~ 221 (222)
T 3f5v_A 218 YVVI 221 (222)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8764
No 25
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=4.6e-62 Score=434.91 Aligned_cols=205 Identities=31% Similarity=0.671 Sum_probs=178.6
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (215)
T 1iwd_A 1 LPSFVDWRSK----GAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT--ASHGCNGGWMNNAFQY 74 (215)
T ss_dssp CCSCEEGGGG----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 2689999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 249 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v 249 (349)
+.++ |+++|++|||.+.. ..|.... ...+++..|. +. .++++||++|.+ |||++
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v 131 (215)
T 1iwd_A 75 IITNGGIDTQQNYPYSAVQ-----------------GSCKPYR-----LRVVSINGFQRVTRNNESALQSAVAS-QPVSV 131 (215)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCTTC-----CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEE
T ss_pred HHHhCCcccccccCccCCC-----------------CCCCCCC-----CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEE
Confidence 9987 99999999996541 1232211 1235667776 54 478899999976 99999
Q ss_pred EEEccc-ccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Cccccccce
Q 018877 250 SFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDV 324 (349)
Q Consensus 250 ~i~v~~-~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~ 324 (349)
+|++++ +|++|++|||..+++. .++|||+||||| +++|++|||||||||++||++|||||+|+. |.|||++++
T Consensus 132 ~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~ 209 (215)
T 1iwd_A 132 TVEAAGAPFQHYSSGIFTGPCGT-AQNHGVVIVGYG-TQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLP 209 (215)
T ss_dssp EECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSC
T ss_pred EEecCCcchhhcCCceECCCCCC-cCCEEEEEEEEe-ccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccc
Confidence 999986 8999999999886654 569999999999 668999999999999999999999999997 899999998
Q ss_pred eEee
Q 018877 325 VAGL 328 (349)
Q Consensus 325 ~~~~ 328 (349)
.+++
T Consensus 210 ~~p~ 213 (215)
T 1iwd_A 210 SYPT 213 (215)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8764
No 26
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=3.9e-62 Score=437.33 Aligned_cols=208 Identities=31% Similarity=0.668 Sum_probs=179.3
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 171 (349)
+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||... +.||+||++..|++
T Consensus 2 ~lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~ 75 (221)
T 1cqd_A 2 DLPDSIDWREN----GAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQ 75 (221)
T ss_dssp -CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHH
T ss_pred CCCCcCcCCCC----CCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHH
Confidence 58999999987 7899999999999999999999999999999999999999999999862 68999999999999
Q ss_pred HHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-CHHHHHHHHHhCCCEE
Q 018877 172 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-DPEDIMAEIYKNGPVE 248 (349)
Q Consensus 172 ~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-~~~~ik~~l~~~gPV~ 248 (349)
|+.++ |+++|++|||.+.. ..|..... ...+.+..|. ++. ++++||++|++ |||+
T Consensus 76 y~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~ 133 (221)
T 1cqd_A 76 FIVNNGGINSEETYPYRGQD-----------------GICNSTVN----APVVSIDSYENVPSHNEQSLQKAVAN-QPVS 133 (221)
T ss_dssp HHHHHTSBCBTTTSCCCSSC-----------------CCCCSSSC----CCSBCCSEEEECCSSCHHHHHHHHTT-SCEE
T ss_pred HHHHhCCccccccCCccCCC-----------------CCcCCCCC----CceEEeccEEEeCCchHHHHHHHHHh-CCEE
Confidence 99987 99999999996541 12322111 2345677777 544 68899999865 9999
Q ss_pred EEEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Cccccccc
Q 018877 249 VSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEED 323 (349)
Q Consensus 249 v~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~ 323 (349)
|+|+++ ++|++|++|||..++.. .++|||+||||| +++|++|||||||||++||++|||||+|+. |.|||+++
T Consensus 134 v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~ 211 (221)
T 1cqd_A 134 VTMDAAGRDFQLYRSGIFTGSCNI-SANHALTVVGYG-TENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRF 211 (221)
T ss_dssp EEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSS
T ss_pred EEEeccCcccccccCccccCCCCC-cCCeEEEEEEEc-ccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeee
Confidence 999997 68999999999886554 579999999999 678999999999999999999999999983 89999999
Q ss_pred eeEeec
Q 018877 324 VVAGLP 329 (349)
Q Consensus 324 ~~~~~p 329 (349)
+.+++.
T Consensus 212 ~~~p~~ 217 (221)
T 1cqd_A 212 ASYPVK 217 (221)
T ss_dssp CEEEEC
T ss_pred eeEEEe
Confidence 987653
No 27
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4.3e-62 Score=436.14 Aligned_cols=207 Identities=31% Similarity=0.649 Sum_probs=179.2
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ +.++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (218)
T 1yal_A 1 YPQSIDWRAK----GAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQY 74 (218)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999987 779999999999999999999999999999999999999999999983 4689999999999999
Q ss_pred HHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++|+++|++|||.+.. . .|..... ....+++..|. ++ .++++||++|++ |||+++
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~ 133 (218)
T 1yal_A 75 VANNGVHTSKVYPYQAKQ-------------Y----KCRATDK---PGPKVKITGYKRVPSNCETSFLGALAN-QPLSVL 133 (218)
T ss_dssp HHHHCBCBTTTSCCCSSC-------------C----CCCGGGC---CSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEE
T ss_pred HHHcCCCccccccccCCC-------------C----CcccCcC---CCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 1 2322110 02345677776 55 478899999976 999999
Q ss_pred EEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Ccccccccee
Q 018877 251 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV 325 (349)
Q Consensus 251 i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~ 325 (349)
|+++ ++|++|++|||..+++.. ++|||+||||| +++|++|||||||||++||++|||||+|+. |.|||++++.
T Consensus 134 i~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~ 211 (218)
T 1yal_A 134 VEAGGKPFQLYKSGVFDGPCGTK-LDHAVTAVGYG-TSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSY 211 (218)
T ss_dssp ECCCSHHHHTCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCE
T ss_pred EeccchhccccCCceECCCCCCC-CCEEEEEEEee-ccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCcccccccee
Confidence 9996 799999999998766543 69999999999 667899999999999999999999999985 8999999988
Q ss_pred Eee
Q 018877 326 AGL 328 (349)
Q Consensus 326 ~~~ 328 (349)
+++
T Consensus 212 ~p~ 214 (218)
T 1yal_A 212 YPF 214 (218)
T ss_dssp EEE
T ss_pred eEE
Confidence 765
No 28
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=3.4e-62 Score=438.10 Aligned_cols=206 Identities=28% Similarity=0.592 Sum_probs=175.0
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|... +.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~ 74 (222)
T 3u8e_A 1 APASIDWRKK----GAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRW 74 (222)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHH
T ss_pred CCCcCcCCcC----CCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHH
Confidence 7999999998 7899999999999999999999999999999999999999999999862 689999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++ |+++|++|||.+.. ..|..... ..+++..|. ++.++++||++| .+|||+++
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~-----~~~~i~~~~~v~~~~~~i~~~l-~~GPV~v~ 131 (222)
T 3u8e_A 75 VITNGGIASDANYPYTGVD-----------------GTCDLNKP-----IAARIDGYTNVPNSSSALLDAV-AKQPVSVN 131 (222)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCCCSC-----CCBCCCEEEECCSCHHHHHHHH-HHSCEEEE
T ss_pred HHHcCCccchhcCCCcccC-----------------CccccCCC-----CeEEEccEEEeCCcHHHHHHHH-hCCCEEEE
Confidence 9998 99999999996541 12332221 145667777 667889999999 56999999
Q ss_pred EEccc-ccccCCC-ceeecCCCCc---cCCcEEEEEEeCCCCC-CccEEEEEccCCCCCCCCceEEEEecCC----cccc
Q 018877 251 FTVYE-DFAHYKS-GVYKHITGDV---MGGHAVKLIGWGTSDD-GEDYWILANQWNRSWGADGYFKIKRGSN----ECGI 320 (349)
Q Consensus 251 i~v~~-~f~~y~~-Giy~~~~~~~---~~~Hav~IVGyg~~~~-g~~ywivkNSWG~~WG~~Gy~~i~~g~n----~cgI 320 (349)
|+++. +|++|++ |||..+.+.. .++|||+||||| +++ +++|||||||||++||++|||||+||.| .|||
T Consensus 132 i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~HaV~iVGyg-~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi 210 (222)
T 3u8e_A 132 IYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYG-SNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAI 210 (222)
T ss_dssp ECCCSHHHHTCCCSSCBCCTTCCCCGGGCCEEEEEEEEE-ESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGT
T ss_pred EEecChhhhcEeCCceECCCcccCCCCcCCEEEEEEEEe-ecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCc
Confidence 99975 8999999 9999844433 579999999999 555 8999999999999999999999999987 9999
Q ss_pred ccceeEee
Q 018877 321 EEDVVAGL 328 (349)
Q Consensus 321 ~~~~~~~~ 328 (349)
++++.+++
T Consensus 211 ~~~~~~p~ 218 (222)
T 3u8e_A 211 DAWGSYPT 218 (222)
T ss_dssp TSSCEEEE
T ss_pred cccceEEE
Confidence 99999776
No 29
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-61 Score=436.24 Aligned_cols=213 Identities=31% Similarity=0.629 Sum_probs=180.9
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 171 (349)
+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.. ..+.||+||++..|++
T Consensus 1 ~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~~gC~GG~~~~a~~ 75 (229)
T 1s4v_A 1 TVPASVDWRKK----GAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT-DQNQGCNGGLMDYAFE 75 (229)
T ss_dssp CCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCTTBCBCHHHHHH
T ss_pred CCCCCEeCCCC----CCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCC-CCCCCCCCCCHHHHHH
Confidence 48999999987 789999999999999999999999999999999999999999999985 2468999999999999
Q ss_pred HHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEE
Q 018877 172 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 248 (349)
Q Consensus 172 ~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~ 248 (349)
|+.++ |+++|++|||.+.. ..|..... ....+.+..|. ++ .+++.||++|.+ |||+
T Consensus 76 y~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~ 134 (229)
T 1s4v_A 76 FIKQRGGITTEANYPYEAYD-----------------GTCDVSKE---NAPAVSIDGHENVPENDENALLKAVAN-QPVS 134 (229)
T ss_dssp HHHHHTCBCBTTTSCCCSSC-----------------CCCCHHHH---TCCCBCCCEEEECCTTCHHHHHHHHHH-SCEE
T ss_pred HHHHhCCccccccCCccCCC-----------------CCCCCCCC---CCcEEEeeeEEEeCCccHHHHHHHHhc-CCEE
Confidence 99987 99999999996541 13332110 12345677776 54 477889999876 9999
Q ss_pred EEEEc-ccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Cccccccc
Q 018877 249 VSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEED 323 (349)
Q Consensus 249 v~i~v-~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~ 323 (349)
++|++ .++|++|++|||..+++. ..+|||+|||||++.+|++|||||||||++||++|||||+|+. |.|||+++
T Consensus 135 v~i~~~~~~f~~Y~~Giy~~~c~~-~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~ 213 (229)
T 1s4v_A 135 VAIDAGGSDFQFYSEGVFTGSCGT-ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAME 213 (229)
T ss_dssp EEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSS
T ss_pred EEEEeCcHHHhhCCCcEECCCCCC-CCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCccccc
Confidence 99999 578999999999876554 4699999999994434999999999999999999999999985 89999999
Q ss_pred eeEeecCC
Q 018877 324 VVAGLPSS 331 (349)
Q Consensus 324 ~~~~~p~~ 331 (349)
+.+++...
T Consensus 214 ~~~p~~~~ 221 (229)
T 1s4v_A 214 ASYPIKKS 221 (229)
T ss_dssp CEEEECCS
T ss_pred ceeeEecC
Confidence 88776543
No 30
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-61 Score=431.34 Aligned_cols=204 Identities=31% Similarity=0.631 Sum_probs=175.0
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (213)
T 3ioq_A 1 IPTSIDWRQK----GAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQY 74 (213)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCCCCcccC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHH
Confidence 7999999997 889999999999999999999999999999999999999999999986 4689999999999999
Q ss_pred HHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEEEEE
Q 018877 173 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSF 251 (349)
Q Consensus 173 ~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~i 251 (349)
+.++|+++|++|||.+.. +.|...+. ....+++..|. ++.+.++++++++.+|||+++|
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~~C~~~~~-------~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i 134 (213)
T 3ioq_A 75 VANSGIHLRQYYPYEGVQ-------------RQCRASQA-------KGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVV 134 (213)
T ss_dssp HHHHCEEBGGGSCCCSSC-------------CCCCGGGC-------CSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEE
T ss_pred HHHcCCCchhccCcCCCC-------------CCCCCCcc-------CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEE
Confidence 999999999999996541 22222111 12345677777 6555455666666789999999
Q ss_pred Ecc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----CccccccceeE
Q 018877 252 TVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVA 326 (349)
Q Consensus 252 ~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~~ 326 (349)
+++ ++|++|++|||..++. ..++|||+||||| + +|||||||||++||++|||||+||. |.|||++.+.+
T Consensus 135 ~~~~~~f~~y~~Giy~~~~~-~~~~HaV~iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~ 208 (213)
T 3ioq_A 135 EAKGRAFQNYRGGIFAGPCG-TSIDHAVAAVGYG-N----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVF 208 (213)
T ss_dssp CCCSHHHHTCCSSEECCSCC-SCCCEEEEEEEEE-T----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEE
T ss_pred EechhhhhhccCCeEcCCCC-CccCceEEEEecC-C----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceE
Confidence 998 7999999999988554 4569999999999 3 8999999999999999999999997 89999999886
Q ss_pred ee
Q 018877 327 GL 328 (349)
Q Consensus 327 ~~ 328 (349)
++
T Consensus 209 p~ 210 (213)
T 3ioq_A 209 PT 210 (213)
T ss_dssp EE
T ss_pred eE
Confidence 64
No 31
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.2e-61 Score=428.74 Aligned_cols=203 Identities=30% Similarity=0.606 Sum_probs=175.2
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (212)
T 2cio_A 1 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQL 74 (212)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcccCCCC----CCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHH
Confidence 7999999987 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++|+++|++|||.... ..|...+. ....+++..|. ++ .++++||++|++ |||+++
T Consensus 75 i~~~Gi~~e~~yPY~~~~-------------~~C~~~~~-------~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~ 133 (212)
T 2cio_A 75 VAQYGIHYRNTYPYEGVQ-------------RYCRSREK-------GPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVV 133 (212)
T ss_dssp HHHTCBCBTTTSCCCSSC-------------CCCCTTTT-------CSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEE
T ss_pred HHHhCcCcccccCCcCCC-------------CCcCCCCC-------CCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 12221111 02235666776 54 478899999976 999999
Q ss_pred EEccc-ccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Ccccccccee
Q 018877 251 FTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV 325 (349)
Q Consensus 251 i~v~~-~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~ 325 (349)
|+++. +|++|++|||.++++. .++|||+||||| + +|||||||||++||++|||||+|+. |+|||++++.
T Consensus 134 i~~~~~~f~~Y~~Gvy~~~~~~-~~~HaV~iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~ 207 (212)
T 2cio_A 134 LEAAGKDFQLYRGGIFVGPCGN-KVDHAVAAVGYG-P----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSF 207 (212)
T ss_dssp ECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEEE-T----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCE
T ss_pred EeccCcchhhcCCceecCCCCC-CCCEEEEEEEec-C----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCccccee
Confidence 99975 8999999999886654 469999999999 3 8999999999999999999999997 8999999988
Q ss_pred Eee
Q 018877 326 AGL 328 (349)
Q Consensus 326 ~~~ 328 (349)
+++
T Consensus 208 ~p~ 210 (212)
T 2cio_A 208 YPV 210 (212)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 32
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=3.8e-61 Score=426.87 Aligned_cols=200 Identities=31% Similarity=0.629 Sum_probs=175.1
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (208)
T 1o0e_A 1 LPEQIDWRKK----GAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQY 74 (208)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEE
Q 018877 173 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 249 (349)
Q Consensus 173 ~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v 249 (349)
+.++ |+++|++|||.+.. ..|... ...+++..|. ++ .++++||++|++ |||++
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~------~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v 130 (208)
T 1o0e_A 75 IINNGGIDTQANYPYKAVQ-----------------GPCQAA------SKVVSIDGYNGVPFCNEXALKQAVAV-QPSTV 130 (208)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCCC------CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEE
T ss_pred HHHhCCcCcccccCccCCC-----------------CcCCCC------CceEEeCeEEEeCCCCHHHHHHHHHh-CCEEE
Confidence 9987 99999999996541 133321 2235666776 54 478899999986 99999
Q ss_pred EEEccc-ccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC--CccccccceeE
Q 018877 250 SFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS--NECGIEEDVVA 326 (349)
Q Consensus 250 ~i~v~~-~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~--n~cgI~~~~~~ 326 (349)
+|+++. +|++|++|||..+++. .++|||+||||| + +|||||||||++||++|||||+|+. |.|||++++.+
T Consensus 131 ~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~ 204 (208)
T 1o0e_A 131 AIDASSAQFQQYSSGIFSGPCGT-KLNHGVTIVGYQ-A----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYY 204 (208)
T ss_dssp EECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEEC-S----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEE
T ss_pred EEEccCcccccccCceECCCCCC-cCCEEEEEEEeC-C----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCccccee
Confidence 999975 8999999999886654 469999999999 3 8999999999999999999999997 89999999887
Q ss_pred ee
Q 018877 327 GL 328 (349)
Q Consensus 327 ~~ 328 (349)
++
T Consensus 205 p~ 206 (208)
T 1o0e_A 205 PT 206 (208)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 33
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2e-61 Score=441.67 Aligned_cols=217 Identities=31% Similarity=0.642 Sum_probs=182.6
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 171 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 171 (349)
+||++||||++ ++++||||||.||||||||++++||++++|+++..+.||+|+|+||.. ..+.||+||++..|++
T Consensus 3 ~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~-~~~~GC~GG~~~~a~~ 77 (262)
T 2fo5_A 3 DLPPSVDWRQK----GAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDT-ADNDGCQGGLMDNAFE 77 (262)
T ss_dssp CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCGGGCBCHHHHHH
T ss_pred CCCCcccCCCC----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcC-CCCCCCCCCCHHHHHH
Confidence 69999999987 789999999999999999999999999999999999999999999985 2468999999999999
Q ss_pred HHHHc-CcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccce-eeeeeeeE-eC-CCHHHHHHHHHhCCCE
Q 018877 172 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSK-HYSISAYR-IN-SDPEDIMAEIYKNGPV 247 (349)
Q Consensus 172 ~~~~~-Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~-~~~i~~~~-~~-~~~~~ik~~l~~~gPV 247 (349)
|+.++ |+++|++|||.... . .|..... +.... .+.+.+|. ++ .++++||++|++ |||
T Consensus 78 yi~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~-~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV 138 (262)
T 2fo5_A 78 YIKNNGGLITEAAYPYRAAR-------------G----TCNVARA-AQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPV 138 (262)
T ss_dssp HHHHTTCEEBTTTSCCCSSC-------------C----CCCHHHH-HHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCE
T ss_pred HHHHcCCcCchhcCCCcCcc-------------C----ccCCccc-ccCCceeEEeceEEEcCCchHHHHHHHHHh-CCE
Confidence 99997 99999999996541 1 2332110 00123 56777887 55 478899999987 899
Q ss_pred EEEEEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCC----cccccc
Q 018877 248 EVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN----ECGIEE 322 (349)
Q Consensus 248 ~v~i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n----~cgI~~ 322 (349)
+++|+++ ++|++|++|||..+++.. .+|||+|||||++.+|++|||||||||++||++|||||+|+.| .|||++
T Consensus 139 ~v~i~~~~~~f~~Y~sGVy~~~c~~~-~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~ 217 (262)
T 2fo5_A 139 SVAVEASGKAFMFYSEGVFTGECGTE-LDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAM 217 (262)
T ss_dssp EEEECCCSHHHHTCCSSEECCCCCCC-CCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTT
T ss_pred EEEEecChHHHhccCCceECCCCCCc-CCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceee
Confidence 9999997 699999999998866544 6999999999944469999999999999999999999999874 599999
Q ss_pred ceeEeecCCCC
Q 018877 323 DVVAGLPSSKN 333 (349)
Q Consensus 323 ~~~~~~p~~~~ 333 (349)
.+.+++....+
T Consensus 218 ~~~~p~~~~~~ 228 (262)
T 2fo5_A 218 EASYPVKTYSK 228 (262)
T ss_dssp SCEEEECCC--
T ss_pred eeeEEEecCCC
Confidence 99877754433
No 34
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=2e-61 Score=446.09 Aligned_cols=227 Identities=33% Similarity=0.695 Sum_probs=188.4
Q ss_pred CCCCCCceecCcCCCCCCCCCcCCCCC---CCCcHHHHHHHHHHHHHHHHHcC-C--CccCCHHHHHHhcCCCCCCCCCC
Q 018877 90 SLKLPKSFDARSAWPQCSTISRILDQG---HCGSCWAFGAVEALSDRFCIHFG-M--NLSLSVNDLLACCGFLCGDGCDG 163 (349)
Q Consensus 90 ~~~lP~s~D~R~~w~~~~~v~pv~dQg---~cGsCwAfA~~~~lE~~~~i~~~-~--~~~lS~q~l~dc~~~~~~~gC~G 163 (349)
..+||++||||+++ .+++++|||||| .||||||||++++||++++|+++ . .+.||+|+|+||.. ..||+|
T Consensus 33 ~~~lP~~~DwR~~~-~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~G 108 (277)
T 1deu_A 33 PADLPKSWDWRNVD-GVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEG 108 (277)
T ss_dssp GGGSCSCEETTSBT-TBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBE
T ss_pred cccCCCceecccCC-CCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCC
Confidence 35799999999972 335699999999 99999999999999999999875 3 47999999999986 379999
Q ss_pred CchHHHHHHHHHcCcCCCCcccCCCCC-CCCC-CCCCCCCCCcccc--ccccccccccccceeeeeeeeEeCCCHHHHHH
Q 018877 164 GYPISAWRYFVHHGVVTEECDPYFDST-GCSH-PGCEPAYPTPKCV--RKCVKKNQLWRNSKHYSISAYRINSDPEDIMA 239 (349)
Q Consensus 164 G~~~~a~~~~~~~Gi~~e~~yPY~~~~-~~~~-~~c~~~~~~~~~~--~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~ 239 (349)
|++..||+|+.++|+++|++|||.... .|.. ..| ..|. ..|.... ....+.+..|....++++||+
T Consensus 109 G~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~------~~~~~~~~c~~~~----~~~~~~i~~y~~v~~~~~i~~ 178 (277)
T 1deu_A 109 GNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFNQC------GTCNEFKECHAIR----NYTLWRVGDYGSLSGREKMMA 178 (277)
T ss_dssp ECHHHHHHHHHHTCBCBGGGSCCCSSCCCCCHHHHS------EEEEETTEEEECS----SCCCBCEEEEEEECSHHHHHH
T ss_pred CCHHHHHHHHHHcCCCcCccCCCcCCCCCccccccc------cccccCccccccc----CcceEEeceeEecCCHHHHHH
Confidence 999999999999999999999996542 2321 111 0010 1222211 123456777772246789999
Q ss_pred HHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCC---
Q 018877 240 EIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN--- 316 (349)
Q Consensus 240 ~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n--- 316 (349)
+|+++|||+|+|+++++|++|++|||..+++...++|||+||||| +++|++|||||||||++||++|||||+||.|
T Consensus 179 ~i~~~GPV~v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg-~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g 257 (277)
T 1deu_A 179 EIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWG-ISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDG 257 (277)
T ss_dssp HHHHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECTTHHHH
T ss_pred HHHHcCCEEEEEecccccccCcCcEECCCCCCCcCCeEEEEEEec-ccCCccEEEEEeCCCCccCCCcEEEEEcCCCccc
Confidence 999999999999998899999999999877666789999999999 6689999999999999999999999999998
Q ss_pred -----ccccccceeEeecCC
Q 018877 317 -----ECGIEEDVVAGLPSS 331 (349)
Q Consensus 317 -----~cgI~~~~~~~~p~~ 331 (349)
.||||+++++++|++
T Consensus 258 ~g~~~~cgIe~~~~~~~p~~ 277 (277)
T 1deu_A 258 KGARYNLAIEEHCTFGDPIV 277 (277)
T ss_dssp TGGGTBTTTTSCEEEEEECC
T ss_pred ccccccceeccccEeecccC
Confidence 999999999999974
No 35
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=5.7e-61 Score=427.56 Aligned_cols=204 Identities=34% Similarity=0.676 Sum_probs=176.7
Q ss_pred CCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018877 93 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 172 (349)
Q Consensus 93 lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (349)
||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|+||.. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (214)
T 2bdz_A 1 YPESIDWREK----GAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQY 74 (214)
T ss_dssp CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHH
Confidence 7999999987 789999999999999999999999999999999999999999999985 3689999999999999
Q ss_pred HHHcCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCEEEE
Q 018877 173 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 250 (349)
Q Consensus 173 ~~~~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v~ 250 (349)
+.++|+++|++|||.... + .|..... ....+.+..|. ++ .++++||++|++ |||+++
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~ 133 (214)
T 2bdz_A 75 VVDNGVHTEREYPYEKKQ-------------G----RCRAKDK---KGPKVYITGYKYVPANDEISLIQAIAN-QPVSVV 133 (214)
T ss_dssp HHHHCEEBTTTSCCCSSC-------------C----CCCTTTC---CSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEE
T ss_pred HHHhCCCccccCCCCCCC-------------C----CCCCCCC---CCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 1 2222110 02345677776 54 478899999987 999999
Q ss_pred EEcc-cccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC----Ccccccccee
Q 018877 251 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV 325 (349)
Q Consensus 251 i~v~-~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~ 325 (349)
|+++ ++|++|++|||..++.. .++|||+||||| + +|||||||||++||++|||||+|+. |.|||++.+.
T Consensus 134 i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~ 207 (214)
T 2bdz_A 134 TDSRGRGFQFYKGGIYEGPCGT-NTDHAVTAVGYG-K----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSF 207 (214)
T ss_dssp ECCCSHHHHTCCSSEECCSCCS-CCCEEEEEEEEC-S----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEE
T ss_pred EeeChhHhhcccCceecCCCCC-CCCeEEEEEEcC-C----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccce
Confidence 9998 69999999999887654 479999999999 3 8999999999999999999999986 8999999998
Q ss_pred Eeec
Q 018877 326 AGLP 329 (349)
Q Consensus 326 ~~~p 329 (349)
+++.
T Consensus 208 ~p~~ 211 (214)
T 2bdz_A 208 FPIK 211 (214)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7654
No 36
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=2.4e-61 Score=437.53 Aligned_cols=208 Identities=29% Similarity=0.637 Sum_probs=178.6
Q ss_pred CCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHH
Q 018877 91 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 170 (349)
Q Consensus 91 ~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~ 170 (349)
.+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.. .+.||+||++..|+
T Consensus 16 ~~lP~~~DwR~~----~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~--~~~gC~GG~~~~a~ 89 (241)
T 2oul_A 16 NFDHAAYDWRLH----SGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF--KNYGCNGGLINNAF 89 (241)
T ss_dssp CCCSSCEEGGGT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT--TSCTTBCBCHHHHH
T ss_pred ccCCCccccCcC----CCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHH
Confidence 479999999997 779999999999999999999999999999999999999999999985 26899999999999
Q ss_pred HHHHH-cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-CHHHHHHHHHhCCCE
Q 018877 171 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-DPEDIMAEIYKNGPV 247 (349)
Q Consensus 171 ~~~~~-~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-~~~~ik~~l~~~gPV 247 (349)
+|+.+ .|+++|++|||.... +. .|..... ...+++..|. ++. ++++||++| |||
T Consensus 90 ~yi~~~~Gi~~e~~yPY~~~~-------------~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV 146 (241)
T 2oul_A 90 EDMIELGGICPDGDYPYVSDA-------------PN---LCNIDRC----TEKYGIKNYLSVPDNKLKEALRFL---GPI 146 (241)
T ss_dssp HHHHHTTSBCBTTSSCCCTTS-------------CC---CCCTTSS----SCCBCCSEEEECCTTCHHHHHHHT---CCE
T ss_pred HHHHHhCCcCccccCCCcCCC-------------CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCE
Confidence 99998 699999999996541 11 1322111 2235667776 544 788999999 999
Q ss_pred EEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCC----------CccEEEEEccCCCCCCCCceEEEEecCCc
Q 018877 248 EVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDD----------GEDYWILANQWNRSWGADGYFKIKRGSNE 317 (349)
Q Consensus 248 ~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~g~n~ 317 (349)
+|+|+++++|++|++|||...++.. ++|||+||||| +++ +++|||||||||++||++|||||+|+.|.
T Consensus 147 ~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg-~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~ 224 (241)
T 2oul_A 147 SISVAVSDDFAFYKEGIFDGECGDQ-LNHAVMLVGFG-MKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESG 224 (241)
T ss_dssp EEEECBCHHHHTCCSSBCCSCBCSS-CCEEEEEEEEE-EEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSS
T ss_pred EEEEecCcchhhcCCcEEcCcCCCC-CCEEEEEEEec-cccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCC
Confidence 9999998899999999998755444 79999999999 443 78999999999999999999999999877
Q ss_pred ----cccccceeEeec
Q 018877 318 ----CGIEEDVVAGLP 329 (349)
Q Consensus 318 ----cgI~~~~~~~~p 329 (349)
|||++++.+++.
T Consensus 225 ~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 225 LMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CCCGGGTTSSEEEEEC
T ss_pred CCCcCCccceEEEEee
Confidence 999999998753
No 37
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=3.7e-61 Score=436.82 Aligned_cols=208 Identities=29% Similarity=0.639 Sum_probs=178.8
Q ss_pred CCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHH
Q 018877 91 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 170 (349)
Q Consensus 91 ~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~ 170 (349)
.+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.. .+.||+||++..|+
T Consensus 18 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~ 91 (243)
T 3bwk_A 18 KLDRIAYDWRLH----GGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV--KNNGCYGGYITNAF 91 (243)
T ss_dssp CCCCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT--TSCGGGCCCHHHHH
T ss_pred ccCCCceecCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHH
Confidence 479999999997 779999999999999999999999999999999999999999999986 26899999999999
Q ss_pred HHHHH-cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-CHHHHHHHHHhCCCE
Q 018877 171 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-DPEDIMAEIYKNGPV 247 (349)
Q Consensus 171 ~~~~~-~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-~~~~ik~~l~~~gPV 247 (349)
+|+.+ .|+++|++|||.... +. .|..... ...+++..|. ++. ++++||++| |||
T Consensus 92 ~y~~~~~Gi~~e~~yPY~~~~-------------~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV 148 (243)
T 3bwk_A 92 DDMIDLGGLCSQDDYPYVSNL-------------PE---TCNLKRC----NERYTIKSYVSIPDDKFKEALRYL---GPI 148 (243)
T ss_dssp HHHHHTTSBCBTTTSCCCTTS-------------CC---CCCGGGC----SSCBCCCEEEECCTTCHHHHHHHT---CCE
T ss_pred HHHHHhCCcccccccCCcCCC-------------CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCE
Confidence 99998 699999999996541 11 1332111 2345677776 544 788999999 999
Q ss_pred EEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCC----------CccEEEEEccCCCCCCCCceEEEEecCCc
Q 018877 248 EVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDD----------GEDYWILANQWNRSWGADGYFKIKRGSNE 317 (349)
Q Consensus 248 ~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~g~n~ 317 (349)
+++|+++++|++|++|||...++.. ++|||+||||| +++ +++|||||||||++||++|||||+|+.|.
T Consensus 149 ~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg-~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~ 226 (243)
T 3bwk_A 149 SISIAASDDFAFYRGGFYDGECGAA-PNHAVILVGYG-MKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENG 226 (243)
T ss_dssp EEEECCCHHHHTCCSSSCCCCCCSS-CCEEEEEEEEE-EEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSS
T ss_pred EEEEecChhHHhcCCceecCCCCCc-CCeEEEEEEec-CccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCC
Confidence 9999998899999999998855444 79999999999 443 78999999999999999999999999876
Q ss_pred ----cccccceeEeec
Q 018877 318 ----CGIEEDVVAGLP 329 (349)
Q Consensus 318 ----cgI~~~~~~~~p 329 (349)
|||++++++++.
T Consensus 227 ~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 227 YKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CCCSTTTTSSEEEEEC
T ss_pred CCCcCCccceEEEEec
Confidence 999999988753
No 38
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.5e-61 Score=434.89 Aligned_cols=211 Identities=29% Similarity=0.631 Sum_probs=180.4
Q ss_pred CCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHH
Q 018877 91 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 170 (349)
Q Consensus 91 ~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~ 170 (349)
.+||++||||++ ++++||||||.||||||||++++||++++++++..+.||+|+|++|.....+.||+||++..|+
T Consensus 5 ~~lP~~~Dwr~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~ 80 (224)
T 3f75_A 5 SELPAGVDWRSR----GCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAF 80 (224)
T ss_dssp GGSCSCEEHHHH----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHH
T ss_pred cCCCCceecccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHH
Confidence 479999999997 7799999999999999999999999999999999999999999999863346899999999999
Q ss_pred HHHHH-cCcCCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eC-CCHHHHHHHHHhCCCE
Q 018877 171 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPV 247 (349)
Q Consensus 171 ~~~~~-~Gi~~e~~yPY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV 247 (349)
+|+.+ .|+++|++|||.+.. + .|..... .....+..|. +. .++++||++|. +|||
T Consensus 81 ~~~~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~----~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV 138 (224)
T 3f75_A 81 QYVLDSGGICSEDAYPYLARD-------------E----ECRAQSC----EKVVKILGFKDVPRRSEAAMKAALA-KSPV 138 (224)
T ss_dssp HHHHHHTCBCBTTTSCCCSSC-------------C----CCCGGGS----CCCBCCSEEEECCSSCHHHHHHHHH-HSCE
T ss_pred HHHHHhCCccccccCCCcCCC-------------C----CCCcCCC----CceEEeccEEEeCCChHHHHHHHHc-CCCE
Confidence 99998 799999999996541 1 2322111 1223466676 43 47889999998 8999
Q ss_pred EEEEEccc-ccccCCCceeecCCCCccCCcEEEEEEeCCCC-CCccEEEEEccCCCCCCCCceEEEEecC---Ccccccc
Q 018877 248 EVSFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGS---NECGIEE 322 (349)
Q Consensus 248 ~v~i~v~~-~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~g~---n~cgI~~ 322 (349)
+++|++.. +|++|++|||. +.+...++|||+|||||++. ++++|||||||||++||++|||||+||. |.|||++
T Consensus 139 ~v~i~~~~~~f~~y~~Giy~-~~~~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~ 217 (224)
T 3f75_A 139 SIAIEADQMPFQFYHEGVFD-ASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLL 217 (224)
T ss_dssp EEEECCCSHHHHTEEEEEEC-CCCCCCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTS
T ss_pred EEEEeccchhhhcCccceEC-CCCCCccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccC
Confidence 99999975 89999999998 44456679999999999433 7899999999999999999999999998 9999999
Q ss_pred ceeEee
Q 018877 323 DVVAGL 328 (349)
Q Consensus 323 ~~~~~~ 328 (349)
++.+++
T Consensus 218 ~~~~p~ 223 (224)
T 3f75_A 218 DASFPV 223 (224)
T ss_dssp SCEEEE
T ss_pred ceeeee
Confidence 988664
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=6e-55 Score=401.41 Aligned_cols=230 Identities=23% Similarity=0.405 Sum_probs=166.6
Q ss_pred ceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCCCCCCCCc-hHHHHHHHH
Q 018877 96 SFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGY-PISAWRYFV 174 (349)
Q Consensus 96 s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~-~~~a~~~~~ 174 (349)
-.|||+. ++|..++||||||.||||||||++++||++++++++..+.||+|+|+||+....+.||+||. +..++.|+.
T Consensus 10 ~~dWR~~-~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 10 CNRLKDE-NNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp BCGGGCT-TSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHhhccC-CCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 4688874 44533449999999999999999999999999998899999999999998644478999996 556678888
Q ss_pred HcC-cCCCCcccCCCC---CCCCCCCCCCCCCCccccccccccccccccceeeeeeeeE-eCC-----C----HHHHHHH
Q 018877 175 HHG-VVTEECDPYFDS---TGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-----D----PEDIMAE 240 (349)
Q Consensus 175 ~~G-i~~e~~yPY~~~---~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~-----~----~~~ik~~ 240 (349)
++| +++|++|||... ..|........ ........+.... ....+++.+|. +.. + +++||++
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~ 163 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWM-NLWDNGKILHNKN----EPNSLDGKGYTAYESERFHDNMDAFVKIIKTE 163 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCC-CTTTTCEECCCCC----SSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHH
T ss_pred HcCCCCCccccCCcCCCCCCCCCCcccccc-ccccccccccccC----CCceeecCCceEeeccccccchhhHHHHHHHH
Confidence 887 899999999642 23433211000 0000000000000 01112344444 322 3 4789999
Q ss_pred HHhCCCEEEEEEcccccccCC-Cceee-cCCCCccCCcEEEEEEeCCC--CCC--ccEEEEEccCCCCCCCCceEEEEe-
Q 018877 241 IYKNGPVEVSFTVYEDFAHYK-SGVYK-HITGDVMGGHAVKLIGWGTS--DDG--EDYWILANQWNRSWGADGYFKIKR- 313 (349)
Q Consensus 241 l~~~gPV~v~i~v~~~f~~y~-~Giy~-~~~~~~~~~Hav~IVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~- 313 (349)
|+++|||+++|++. +|+.|+ +|++. ..++...++|||+|||||++ ++| ++|||||||||++|||+|||||+|
T Consensus 164 i~~~GPV~v~i~~~-~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~ 242 (265)
T 2wbf_X 164 VMNKGSVIAYIKAE-NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMY 242 (265)
T ss_dssp HHHHSCEEEEECGG-GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESS
T ss_pred HHhcCCEEEEEEcc-cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEec
Confidence 99999999999984 677774 45432 33444568999999999943 355 689999999999999999999986
Q ss_pred cCCccccccceeEeecCCC
Q 018877 314 GSNECGIEEDVVAGLPSSK 332 (349)
Q Consensus 314 g~n~cgI~~~~~~~~p~~~ 332 (349)
+.|+|||++.+.+++|.+.
T Consensus 243 g~n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 243 GPTHCHFNFIHSVVIFNVD 261 (265)
T ss_dssp CCTTCSSCSCCEEEEECEE
T ss_pred CCCccCcceeEEEEecccc
Confidence 5799999999999988754
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=4.1e-55 Score=407.24 Aligned_cols=248 Identities=22% Similarity=0.269 Sum_probs=185.3
Q ss_pred CeEEecCCCCCCCCHHHHHHhhCCCCCCCCCcCCCCccccCCCCCCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHH
Q 018877 48 GWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAV 127 (349)
Q Consensus 48 ~~~~~~n~~fsd~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~ 127 (349)
......| ++.++..|.|+..+|..+++................+||++||||++ + ||||||.||||||||++
T Consensus 13 ~~~~~~~-~~~~~~~~~~~~~lG~~p~~~d~rd~~~~~~~~~~~~lP~s~DwR~~----~---pVkdQG~CGSCWAFAa~ 84 (291)
T 3ois_A 13 GLVPRGS-HMQTVLKRRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPP----F---QVYDQGRIGSCTANALA 84 (291)
T ss_dssp -----------CCCCCCCCTTCCEECCCCCTTCCBCCCCHHHHHTCCSEEECCCS----S---CCCBCTTSSCHHHHHHH
T ss_pred Ccccchh-hHhHhhhccccccCCCCCCCCcccccccCCCccccccCCcceecccC----C---CcccCCCCccHHHHHHH
Confidence 3444566 89999999999888888765544321111111112479999999986 2 99999999999999999
Q ss_pred HHHHHHHHHHcCCCccCCHHHHH--HhcCC--CCCCCCCCCchHHHHHHHHHcCcCCCCcccCCCC----CCCCCCCCCC
Q 018877 128 EALSDRFCIHFGMNLSLSVNDLL--ACCGF--LCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDS----TGCSHPGCEP 199 (349)
Q Consensus 128 ~~lE~~~~i~~~~~~~lS~q~l~--dc~~~--~~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~----~~~~~~~c~~ 199 (349)
++||++++ +++..+.||+|+|+ +|... .+..+|.||++..|++|+.++||++|++|||.+. ..|..+++..
T Consensus 85 ~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 85 AAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhCCCCCCcccccccccccccc
Confidence 99999886 46777899999998 67631 2234689999999999999999999999999765 2354432211
Q ss_pred CCCCccccccccccccccccceeeeeeeeE-eCCCHHHHHHHHHhCCCEEEEEEcccccccCCC--ceeecCCCC--ccC
Q 018877 200 AYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKS--GVYKHITGD--VMG 274 (349)
Q Consensus 200 ~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~i~v~~~f~~y~~--Giy~~~~~~--~~~ 274 (349)
. ...+...|... ...+++.+|. ++.++++||++|+++|||+++|+++++|+.|++ |||..+.+. ..+
T Consensus 164 ~--~~~p~~~C~~~------~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~ 235 (291)
T 3ois_A 164 A--SKKPSDQCYKD------AQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEG 235 (291)
T ss_dssp G--GSCCCHHHHHH------HGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEE
T ss_pred c--cCCCCHHHHhh------cccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcC
Confidence 1 11123345422 2345677777 667899999999999999999999999999998 999887642 346
Q ss_pred CcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecC
Q 018877 275 GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS 315 (349)
Q Consensus 275 ~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~ 315 (349)
+|||+||||| ++++|||||||||++||++|||||+|+.
T Consensus 236 ~Hav~iVGy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 236 GHAVLCVGYD---DEIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEEEEEEEE---TTTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred CeEEEEEEEe---CCCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 9999999999 5789999999999999999999999984
No 41
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=2.2e-41 Score=327.27 Aligned_cols=237 Identities=16% Similarity=0.177 Sum_probs=154.2
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHH-cCCCccCCH----------------HHHHHhcC
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIH-FGMNLSLSV----------------NDLLACCG 154 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~-~~~~~~lS~----------------q~l~dc~~ 154 (349)
..|..|+++.. ..++||+|||+||+|||||++++||+.++++ ++..+.||+ |+|+||+.
T Consensus 52 ~~~~~F~~~~~----~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~ 127 (457)
T 2e01_A 52 QDNRVFNTVVS----TDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSAD 127 (457)
T ss_dssp HCCCCCSEECC----------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCceEEEec----CCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcC
Confidence 45667776654 4589999999999999999999999999998 778999999 78899975
Q ss_pred CC----------CCCCCCCCchHHHHHHHHHcCcCCCCcccC-CCCCCCCC----------------------CCCCCCC
Q 018877 155 FL----------CGDGCDGGYPISAWRYFVHHGVVTEECDPY-FDSTGCSH----------------------PGCEPAY 201 (349)
Q Consensus 155 ~~----------~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY-~~~~~~~~----------------------~~c~~~~ 201 (349)
.. .+.||+||....+++++.++|++++++||| ......+. .......
T Consensus 128 ~~~~~r~v~~l~~~~gcdGG~~~~a~~~i~kyGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~ 207 (457)
T 2e01_A 128 QDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDS 207 (457)
T ss_dssp SCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSH
T ss_pred CcccchhhhhhccCCCCCCCCHHHHHHHHHHcCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhh
Confidence 21 368999999999999999999999999999 32100000 0000000
Q ss_pred -------------------CCccccc----cc----------------cc----------ccccc---------ccceee
Q 018877 202 -------------------PTPKCVR----KC----------------VK----------KNQLW---------RNSKHY 223 (349)
Q Consensus 202 -------------------~~~~~~~----~c----------------~~----------~~~~~---------~~~~~~ 223 (349)
.-+.|+. ++ .+ ....| .-.+.|
T Consensus 208 ~l~~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y 287 (457)
T 2e01_A 208 IIVTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLI 287 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeE
Confidence 0000011 11 00 00000 000111
Q ss_pred eee-----------eeE-eCCCH--HHHHHHHHhCCCEEEEEEcccccccCCCceeecCC--------------------
Q 018877 224 SIS-----------AYR-INSDP--EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT-------------------- 269 (349)
Q Consensus 224 ~i~-----------~~~-~~~~~--~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~-------------------- 269 (349)
.+. .|. ++.++ +.++.+|.++|||.++++|.+ |.+|++|||...+
T Consensus 288 ~ve~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~ 366 (457)
T 2e01_A 288 KIDRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQQKASRIRY 366 (457)
T ss_dssp EETTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCCCHHHHHHT
T ss_pred EEeccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccchhhcCcccccCHHHhhcc
Confidence 110 122 33222 455677888999999999975 7788999997554
Q ss_pred CCccCCcEEEEEEeCCCCCCc--cEEEEEccCCCCCCCCceEEEEecCCccccccceeEeecCCCCcchh
Q 018877 270 GDVMGGHAVKLIGWGTSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKE 337 (349)
Q Consensus 270 ~~~~~~Hav~IVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~p~~~~~~~~ 337 (349)
+....+|||+|||||.+++|+ .|||||||||++||++|||+|+++ .++.+++..+...+-+.++
T Consensus 367 ~~s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~ivV~k~~lp~~ 432 (457)
T 2e01_A 367 HESLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIVVDINELPKE 432 (457)
T ss_dssp TSCCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEEEEGGGSCHH
T ss_pred CCCCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEEechhhCCHH
Confidence 234569999999999656888 899999999999999999999997 6777777766555544443
No 42
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1e-40 Score=322.33 Aligned_cols=232 Identities=19% Similarity=0.240 Sum_probs=164.8
Q ss_pred CCCCceecCcCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHHHH-cCCCccCCH----------------HHHHHhcC
Q 018877 92 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIH-FGMNLSLSV----------------NDLLACCG 154 (349)
Q Consensus 92 ~lP~s~D~R~~w~~~~~v~pv~dQg~cGsCwAfA~~~~lE~~~~i~-~~~~~~lS~----------------q~l~dc~~ 154 (349)
..|..|+++.. ..++||+|||+||+|||||++++||+.++++ ++..+.||+ |+|+||..
T Consensus 47 ~~~~~F~~~~~----~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~ 122 (453)
T 2cb5_A 47 RAQHVFQHAVP----QEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQ 122 (453)
T ss_dssp HCCCCCSEECS----CCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceeeeec----cCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 45777877765 5589999999999999999999999999998 568999999 99999985
Q ss_pred C------------CCCCCCCCCchHHHHHHHHHcCcCCCCcccCCCCC---------------------------CCCC-
Q 018877 155 F------------LCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDST---------------------------GCSH- 194 (349)
Q Consensus 155 ~------------~~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~~---------------------------~~~~- 194 (349)
. ..+.||+||....|++++.++|++++++|||.... ++..
T Consensus 123 ~~~~~d~R~v~~l~~~~gcdGG~~~~a~~~i~kyGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~ 202 (453)
T 2cb5_A 123 RKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKG 202 (453)
T ss_dssp TTCCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred ccCCcchhhHHHhcCCCCCCCCChHHHHHHHHHcCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 2 13589999999999999999999999999996531 1000
Q ss_pred -CC----------------CCCCCCCcccccccc--c--cc----------c-----cc-----ccce------------
Q 018877 195 -PG----------------CEPAYPTPKCVRKCV--K--KN----------Q-----LW-----RNSK------------ 221 (349)
Q Consensus 195 -~~----------------c~~~~~~~~~~~~c~--~--~~----------~-----~~-----~~~~------------ 221 (349)
.. |.. .++.++. . .. . .+ ....
T Consensus 203 ~l~~~k~~~l~~iy~il~~clG-----~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~ 277 (453)
T 2cb5_A 203 EISATQDVMMEEIFRVVCICLG-----NPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQH 277 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----CCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-----CCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcC
Confidence 00 100 0000000 0 00 0 00 0000
Q ss_pred ----eeeee-----------eeE-eCCCH--HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCC-------------
Q 018877 222 ----HYSIS-----------AYR-INSDP--EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG------------- 270 (349)
Q Consensus 222 ----~~~i~-----------~~~-~~~~~--~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~------------- 270 (349)
.+.+. .|. ++.+. +.++.+|.++|||+++++|.+ +.++++|||..+++
T Consensus 278 py~~~y~v~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~~~~fg~~~~~m 356 (453)
T 2cb5_A 278 KHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDHELVFGVSLKNM 356 (453)
T ss_dssp CSSEEEEETTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCHHHHHSCCSCSS
T ss_pred cccceeEEeecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccchhhcCcccccc
Confidence 01110 011 22211 345578889999999999975 44569999986543
Q ss_pred ---------CccCCcEEEEEEeC--CCCCCc-cEEEEEccCCCCCCCCceEEEEecCCccccccceeEeecCCCCcchh
Q 018877 271 ---------DVMGGHAVKLIGWG--TSDDGE-DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKE 337 (349)
Q Consensus 271 ---------~~~~~Hav~IVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~p~~~~~~~~ 337 (349)
....+|||+||||| .+++|+ .|||||||||++||++|||+|+++ .++.+++..+...+-+.++
T Consensus 357 ~KaeRl~~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vvV~k~~l~~~ 431 (453)
T 2cb5_A 357 NKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVVVDRKHVPEE 431 (453)
T ss_dssp CHHHHHHTTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEEEEGGGSCHH
T ss_pred CHHHHhhccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEEechhhCCHH
Confidence 23469999999999 766788 999999999999999999999987 7777777766555555444
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=2.1e-35 Score=279.74 Aligned_cols=203 Identities=17% Similarity=0.218 Sum_probs=138.4
Q ss_pred CCcCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCC----------CCCCCCCCCchHHHHHHHHHcCc
Q 018877 109 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGF----------LCGDGCDGGYPISAWRYFVHHGV 178 (349)
Q Consensus 109 v~pv~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~----------~~~~gC~GG~~~~a~~~~~~~Gi 178 (349)
++||||||+||+|||||++++||+.++++++..+.||+|+|++|+.. ..+.||+||....|++|+.++|+
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~Gi 101 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGL 101 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHTCC
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHcCc
Confidence 89999999999999999999999999999899999999999999731 12479999999999999999999
Q ss_pred CCCCccc----CCCCCCCCC---------------C--CCCC---------------------------------CCCCc
Q 018877 179 VTEECDP----YFDSTGCSH---------------P--GCEP---------------------------------AYPTP 204 (349)
Q Consensus 179 ~~e~~yP----Y~~~~~~~~---------------~--~c~~---------------------------------~~~~~ 204 (349)
+++++|| |.... ..+ . ...- ..-+|
T Consensus 102 vpe~~YP~~~~~~~~s-~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~TP 180 (383)
T 3pw3_A 102 VPEEEMRPGMMYADTL-SNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTP 180 (383)
T ss_dssp CBGGGSCTTGGGTCSS-CBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEECH
T ss_pred CcHHhCCCCCCCCccc-hhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcCH
Confidence 9999999 21110 000 0 0000 00000
Q ss_pred cc--cccccccccc--ccc------ceeeee--------eeeEeCCCHHHH----HHHHHhCCCEEEEEEcccccccCCC
Q 018877 205 KC--VRKCVKKNQL--WRN------SKHYSI--------SAYRINSDPEDI----MAEIYKNGPVEVSFTVYEDFAHYKS 262 (349)
Q Consensus 205 ~~--~~~c~~~~~~--~~~------~~~~~i--------~~~~~~~~~~~i----k~~l~~~gPV~v~i~v~~~f~~y~~ 262 (349)
.. ...+...... ..+ .+.+.+ ..| ++...+.| .++|.++-||..+-+|.+.++. +.
T Consensus 181 ~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~-~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~-~~ 258 (383)
T 3pw3_A 181 KSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMS-YNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT-RD 258 (383)
T ss_dssp HHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEE-EECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC-TT
T ss_pred HHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCcc-CCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC-CC
Confidence 00 0000000000 000 011111 001 11223444 4556678899999999875555 88
Q ss_pred ceeecCC----------------------------------------------CCccCCcEEEEEEeCCCCCCccEEEEE
Q 018877 263 GVYKHIT----------------------------------------------GDVMGGHAVKLIGWGTSDDGEDYWILA 296 (349)
Q Consensus 263 Giy~~~~----------------------------------------------~~~~~~Hav~IVGyg~~~~g~~ywivk 296 (349)
||...+. .....+|||+|||||.+++|++||+||
T Consensus 259 Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vk 338 (383)
T 3pw3_A 259 GVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVK 338 (383)
T ss_dssp SEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEE
T ss_pred ceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEE
Confidence 8873221 012347999999999667899999999
Q ss_pred ccCCCCCCCCceEEEEec
Q 018877 297 NQWNRSWGADGYFKIKRG 314 (349)
Q Consensus 297 NSWG~~WG~~Gy~~i~~g 314 (349)
||||++||++||++|+++
T Consensus 339 NSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 339 NSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CSBCSCSTTTTEEEEEHH
T ss_pred eCCCCCCCcCCeEEecHH
Confidence 999999999999999975
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.07 E-value=1.1e-10 Score=90.72 Aligned_cols=66 Identities=14% Similarity=0.214 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCCCCCeEEecCCCCCCCCHHHHHH-hhCCCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKH-LLGVKP 73 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~~~~~~~~~n~~fsd~t~eE~~~-~~~~~~ 73 (349)
+...|..|+..|+|. .+..|...|+.+|.++ +|+++|+. +.+|++|+| +|+|||.+||++ ++|.+.
T Consensus 21 ~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN-~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 21 FQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMN-HFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp HHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCC-TTTTCCHHHHHHHSCCBCC
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCc-ccccCCHHHHHHHHcCCCC
Confidence 457899999999988 5667888999999986 68999985 789999999 999999999998 566553
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=98.95 E-value=4e-10 Score=83.55 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHhhhh-cccccccccccccHHH--HHHHHHhCC---CCCeEEecCCCCCCCCHHHHHHhhCCCCC
Q 018877 6 IRSNWMWCCLQTFAE-GVVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKHLLGVKPT 74 (349)
Q Consensus 6 ~~~~~~~f~~~~~~~-~~~~e~~~r~~~~~~~--~i~~~n~~~---~~~~~~~~n~~fsd~t~eE~~~~~~~~~~ 74 (349)
....|..|+..|.|. .+..|...| .+|.++ .|+++|+.. ..+|++|+| +|+|||.+||+.++|.+.+
T Consensus 6 ~~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlT~eEf~~~~g~~~~ 78 (80)
T 2l95_A 6 SDEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGIN-HLADLTPEEFAQRSGKKVP 78 (80)
T ss_dssp CHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCC-GGGTSSHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCc-ccccCCHHHHHHHhCCCCC
Confidence 447899999999998 466788889 999986 689999852 468999999 9999999999337776543
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.76 E-value=0.00038 Score=57.85 Aligned_cols=137 Identities=13% Similarity=0.052 Sum_probs=88.3
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCC---CCCCCCCchHHHHHHHHHcCcCCCCcccCCCC
Q 018877 113 LDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLC---GDGCDGGYPISAWRYFVHHGVVTEECDPYFDS 189 (349)
Q Consensus 113 ~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~---~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~ 189 (349)
..||.-+-|-+|+.++.|-+... .-..+++.++.-.-+.- ...-.|..+...++|++..|.... |
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~n-----t~~~nA~~iMr~~yPN~s~~~l~~t~~~~~q~Iky~~s~G~~~~----~--- 92 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKN-----TDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDIH----Y--- 92 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHT-----CSCCCHHHHHHHHSTTSCTTTGGGCCBCHHHHHHHHHHTTCCCE----E---
T ss_pred eccCcCchHHHHHHHHHHHhhhc-----cCcCCHHHHHHHHCCCCChhHHhhcCCCHHHHHHHHHHcCcChh----H---
Confidence 36999999999999998876542 12234444444332100 001146678899999987773210 0
Q ss_pred CCCCCCCCCCCCCCccccccccccccccccceeeeeeeeEeCCCHHHHHHHHHhCCCEEEEEEcccccccCCCceeecCC
Q 018877 190 TGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT 269 (349)
Q Consensus 190 ~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~ 269 (349)
. .-..+.+.+++.+.++.||.+...- ++...+
T Consensus 93 ----------------------------------~----nr~ls~neV~~~i~~Nk~I~v~~~~----------v~e~~~ 124 (183)
T 1pxv_A 93 ----------------------------------Q----EGVPSYNQVDQLTKDNVGIMILAQS----------VSQNPN 124 (183)
T ss_dssp ----------------------------------E----ESCCCHHHHHHHHHTTCCEEEEEEC----------CCSSTT
T ss_pred ----------------------------------h----cCCCCHHHHHHHHhcCCcEEEEccc----------cccCCC
Confidence 0 0123558899999999999888762 211222
Q ss_pred CCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCC
Q 018877 270 GDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN 316 (349)
Q Consensus 270 ~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n 316 (349)
+ ...+||++||||- ..++.++.+|=|=|-. |++-++.+.+
T Consensus 125 ~-~~~gHA~av~Gya-~~~~~~~y~~WNPW~~-----~~~~~~a~S~ 164 (183)
T 1pxv_A 125 D-PHLGHALAVVGNA-KINDQEKLIYWNPWDT-----ELSIQDADSS 164 (183)
T ss_dssp S-CCCEEEEEEEEEE-EETTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred C-ccCceeEEEEeee-ecCCCeEEEEeCCccC-----CcEeecCCCC
Confidence 2 2359999999999 6668889999888854 6777776544
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.42 E-value=0.0029 Score=52.39 Aligned_cols=121 Identities=17% Similarity=0.249 Sum_probs=84.4
Q ss_pred CCCCCCcHHHHHHHHHHHHHHH--------HHcCCCccCCHHHHHHhcCCCCCCCCCCCchHHHHHHHHHcCcCCCCccc
Q 018877 114 DQGHCGSCWAFGAVEALSDRFC--------IHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDP 185 (349)
Q Consensus 114 dQg~cGsCwAfA~~~~lE~~~~--------i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~yP 185 (349)
.||.-+-|-+|+.++.|-+... +.+.....+|+++|..+ |..+...++|+++.|-- - -
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~g~~-~---~ 82 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQGRS-P---Q 82 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHTTCC-C---E
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHcCCC-h---h
Confidence 6999999999999998876652 12224578888888854 34577889999887631 0 0
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccccccccceeeeeeeeEeCCCHHHHHHHHHhCCCEEEEEEcccccccCCCcee
Q 018877 186 YFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVY 265 (349)
Q Consensus 186 Y~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy 265 (349)
+.. -..+.+++++++.++.|+.+..+-.+ .
T Consensus 83 ~~n-----------------------------------------~~ls~~eV~~~~~~nk~i~i~~~~ve----~----- 112 (174)
T 1cv8_A 83 LLN-----------------------------------------RMTTYNEVDNLTKNNKGIAILGSRVE----S----- 112 (174)
T ss_dssp EES-----------------------------------------SCCCHHHHHHHHHTTCCEEEEEEESS----C-----
T ss_pred hhc-----------------------------------------CCCCHHHHHHHHhcCCceEEEccccc----C-----
Confidence 000 11245889999999999988776321 1
Q ss_pred ecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCC
Q 018877 266 KHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNR 301 (349)
Q Consensus 266 ~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~ 301 (349)
+++ ...+||++||||-.-.+|.+|.++=|=|-.
T Consensus 113 --~~~-~~~gHAlav~Gy~~~~ng~~~y~~WNPW~~ 145 (174)
T 1cv8_A 113 --RNG-MHAGHAMAVVGNAKLNNGQEVIIIWNPWDN 145 (174)
T ss_dssp --BTT-BCCEEEEEEEEEEEETTSCEEEEEECTTCS
T ss_pred --CCC-CCCceeEEEEeeeeecCCceEEEEeCCccC
Confidence 111 235899999999944678899999998854
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.42 E-value=0.0012 Score=60.59 Aligned_cols=136 Identities=13% Similarity=0.061 Sum_probs=86.6
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHhcCCCCC---CCCCCCchHHHHHHHHHcCcCCCCcccCCCC
Q 018877 113 LDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCG---DGCDGGYPISAWRYFVHHGVVTEECDPYFDS 189 (349)
Q Consensus 113 ~dQg~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~dc~~~~~~---~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~ 189 (349)
..||.-+-|-+|+.+++|-+... .-..+++.++.-..+... -.-.|..+...++|++..|.-..
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~-----t~~~nA~~iMr~~yPN~S~~~l~~ts~~~~q~Iky~qsyG~~~~-------- 267 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKN-----TDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDIH-------- 267 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTT-----CSCCCHHHHHHHHCTTSCTTTGGGCCCCHHHHHHHHHHTTEEEE--------
T ss_pred eccCCCchHHHHHHHHHHHhhhc-----cCcCCHHHHHHHHCCCCChhHHhhcCCCHHHHHHHHHHhCcchh--------
Confidence 36999999999999988765531 222344444443321100 01145678889999987773200
Q ss_pred CCCCCCCCCCCCCCccccccccccccccccceeeeeeeeEeCCCHHHHHHHHHhCCCEEEEEEcc-cccccCCCceeecC
Q 018877 190 TGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHI 268 (349)
Q Consensus 190 ~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~i~v~-~~f~~y~~Giy~~~ 268 (349)
-..-..+.+.+++.+-++.||.+.+.-. +. .
T Consensus 268 -------------------------------------~~n~~ls~deVk~~id~Nk~I~v~~~~v~~~-----------~ 299 (367)
T 1x9y_A 268 -------------------------------------YQEGVPSYNQVDQLTKDNVGIMILAQSVSQN-----------P 299 (367)
T ss_dssp -------------------------------------EEESCCCHHHHHHHHHTTCCEEEEEEETTSC-----------S
T ss_pred -------------------------------------hhcCCCCHHHHHHHHhcCCcEEEEccccccC-----------C
Confidence 0001235588999999999999988742 21 1
Q ss_pred CCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEecCC
Q 018877 269 TGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN 316 (349)
Q Consensus 269 ~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n 316 (349)
+ ....+|||+||||- ..++.+|.++=|=|-.+ ++-++...+
T Consensus 300 n-~~~~gHAlavvGyA-~~~~~~~y~~WNPW~~~-----~~~~sa~S~ 340 (367)
T 1x9y_A 300 N-DPHLGHALAVVGNA-KINDQEKLIYWNPWDTE-----LSIQDADSS 340 (367)
T ss_dssp S-SCCCSEEEEEEEEE-EETTEEEEEEECTTCSS-----CEEEETTCC
T ss_pred C-CccCceeEEEEecc-ccCCCcEEEEecCccCC-----ceeecCCCC
Confidence 1 12359999999998 55588999998888543 776665443
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=90.91 E-value=0.54 Score=41.29 Aligned_cols=61 Identities=20% Similarity=0.346 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHhCCCEEEEEEcccccccCCC---ceeecCCCC---ccCCcEEEEEEeCCCCCCccEEEEEccC
Q 018877 232 SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKS---GVYKHITGD---VMGGHAVKLIGWGTSDDGEDYWILANQW 299 (349)
Q Consensus 232 ~~~~~ik~~l~~~gPV~v~i~v~~~f~~y~~---Giy~~~~~~---~~~~Hav~IVGyg~~~~g~~ywivkNSW 299 (349)
.+.++|+++|.++.||+|-+... |..... -.+..+.+. ...+|+|+|+||+ . +..+|-..+
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~~--~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd-~----~~vyi~DP~ 196 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNAT--FAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYD-Q----ESVYIRDPL 196 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEETT--SSCCCGGGCEEEEETTEEEEECTTEEEEEEEEEC-S----SEEEEECTT
T ss_pred CCHHHHHHHHHCCCeEEEEEeCC--cccccccccceeecCCCceeeccCCeEEEEEEEe-C----CEEEEECCC
Confidence 47899999999999999987652 221110 011111111 1248999999998 2 355566554
No 50
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=77.38 E-value=4 Score=36.22 Aligned_cols=73 Identities=25% Similarity=0.533 Sum_probs=49.3
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCC--CCceEEEE
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWG--ADGYFKIK 312 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i~ 312 (349)
+.|+.+|.++.||.++-.- ..++||.+|=||. . .+|+-|= || || .+|||.+.
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~-~---~~~~H~N--wG--WgG~~nGYy~l~ 225 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGAD-G---RNFYHVN--WG--WGGVSDGFFRLD 225 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEE-S---SSCEEEE--CS--STTTTCEEECTT
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccc-c---CCEEEEE--cC--CCCCCCceeecc
Confidence 6788999999999876531 1369999999998 2 3565554 55 44 48999986
Q ss_pred e-cCC---------ccccccceeEeecCCCC
Q 018877 313 R-GSN---------ECGIEEDVVAGLPSSKN 333 (349)
Q Consensus 313 ~-g~n---------~cgI~~~~~~~~p~~~~ 333 (349)
. +.. .-.+..+++.++|-+++
T Consensus 226 ~lnp~~~G~g~~~ggf~~~Q~~v~g~~~~~~ 256 (261)
T 4d8b_A 226 ALNPSALGTGGGAGGFNGYQSAVVGIKPLEH 256 (261)
T ss_dssp CCCCSSCCTTCTTCCCCEEEEEEECCCBC--
T ss_pred ccCccccccCCCCCCcccccceeecCCcccc
Confidence 4 222 24456677777777765
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=67.91 E-value=7.6 Score=36.30 Aligned_cols=61 Identities=30% Similarity=0.670 Sum_probs=37.4
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCC--CCceEEEE
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWG--ADGYFKIK 312 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i~ 312 (349)
+.|+.+|.++.||...-.- . .++||.+|=||. +.+||=|= || || .+|||.+.
T Consensus 290 ~~i~~eL~~~rPV~~~G~~-~-----------------~gGHAfV~DGy~----~~~~~H~N--wG--WgG~~nGyy~l~ 343 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVG-K-----------------VGGHAFVIDGAD----GRNFYHVN--WG--WGGVSDGFFRLD 343 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEE-T-----------------TEEEEEEEEEEC----SSSEEEEE--CS--STTTTCEEEESC
T ss_pred HHHHHHHHcCCCEEEEeec-C-----------------CCceEEEECccc----CCCeEEEE--eC--cCCCCCcceecc
Confidence 5688999999999754321 0 169999999998 24565554 55 44 48999986
Q ss_pred e-cCCccccc
Q 018877 313 R-GSNECGIE 321 (349)
Q Consensus 313 ~-g~n~cgI~ 321 (349)
- +.+.-||+
T Consensus 344 ~l~p~~~g~g 353 (371)
T 1dki_A 344 ALNPSALGTG 353 (371)
T ss_dssp CC--------
T ss_pred CCCCCCcccc
Confidence 4 23334443
No 52
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=64.35 E-value=13 Score=33.90 Aligned_cols=60 Identities=23% Similarity=0.363 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEe
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 313 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 313 (349)
+.|+.+|.++.||...-.- ... .. ..++||.+|=||. . .+||=|==.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~-~~~------~~------~~~GHafV~DGY~-~---~~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS-PGS------MG------QDAGHAFVIDGYN-K---AGLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEEC-T---TSCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEec-CCC------CC------CCCceEEEEcccc-C---CCeEEEecCCCCC--CCceEeccC
Confidence 4689999999998764321 111 10 2369999999998 2 3566655444411 389998864
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=40.52 E-value=61 Score=29.62 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCC---CCCccEEEEEccCC-CCCC------
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTS---DDGEDYWILANQWN-RSWG------ 304 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~---~~g~~ywivkNSWG-~~WG------ 304 (349)
+.|++++..+.+++.++.+......-. .....-..+||-.|++..+. ..+...-.|||-|| ..|-
T Consensus 211 ~~l~~~~~~g~l~~~s~~~t~~~~~~~-----~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~ 285 (339)
T 2r9f_A 211 QIILKALERGSLLGCSINISDIRDLEA-----ITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDN 285 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSSSTTCS-----BCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTT
T ss_pred HHHHHHHHCCCeEEEEecCCCccchhh-----hhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcC
Q ss_pred -------------------CCceEEEE
Q 018877 305 -------------------ADGYFKIK 312 (349)
Q Consensus 305 -------------------~~Gy~~i~ 312 (349)
++|-|||+
T Consensus 286 s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 286 SYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp CGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CccccccCHHHHHHhCCCCCCCEEEEE
No 54
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=36.33 E-value=70 Score=29.21 Aligned_cols=29 Identities=21% Similarity=0.440 Sum_probs=22.1
Q ss_pred cCCcEEEEEEeCCC---CCCccEEEEEccCCC
Q 018877 273 MGGHAVKLIGWGTS---DDGEDYWILANQWNR 301 (349)
Q Consensus 273 ~~~Hav~IVGyg~~---~~g~~ywivkNSWG~ 301 (349)
..+||-.|++.... .++...-.|||-||.
T Consensus 243 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 243 IKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred ccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 35899999998621 134678899999996
No 55
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=29.51 E-value=1.1e+02 Score=27.56 Aligned_cols=73 Identities=21% Similarity=0.316 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCC---CCCccEEEEEccCC-CCCC------
Q 018877 235 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTS---DDGEDYWILANQWN-RSWG------ 304 (349)
Q Consensus 235 ~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~---~~g~~ywivkNSWG-~~WG------ 304 (349)
+.|++++..+..++.++........-. .....-..+||-.|++..+. ..+...-.|||-|| ..|-
T Consensus 206 ~~l~~~~~~g~l~~~~~~~~~~~~~~~-----~~~~GLv~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~ 280 (326)
T 2nqa_A 206 QIIRKALCAGSLLGCSIDVYSAAEAEA-----ITSQKLVKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDD 280 (326)
T ss_dssp HHHHHHHHTTCEEEEECCCSSGGGTTC-----BCTTSCBSSCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTT
T ss_pred HHHHHHHhCCCceEEeecCCCcccchh-----hhccCCccCceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCC
Q ss_pred -------------------CCceEEEE
Q 018877 305 -------------------ADGYFKIK 312 (349)
Q Consensus 305 -------------------~~Gy~~i~ 312 (349)
++|-|||+
T Consensus 281 s~~W~~~~~~~~~~l~~~~~dG~FWMs 307 (326)
T 2nqa_A 281 APEWNHIDPRRKEELDKKVEDGEFWMS 307 (326)
T ss_dssp CGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CccccccCHHHHHHhCCCCCCCEEEEE
No 56
>1y08_A Hypothetical protein SPY0861; cysteine proteinase, papain-like fold with major insertions, hydrolase; 1.93A {Streptococcus pyogenes} SCOP: d.3.1.12 PDB: 2avw_A 2au1_A
Probab=23.42 E-value=86 Score=28.38 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=38.2
Q ss_pred HHHHHHHHHhCCCEEEEEEcccccccCCCceeecCCCCccCCcEEEEEEeCCCCCCc-cEEEEEccCCCCCCCCceEEEE
Q 018877 234 PEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGE-DYWILANQWNRSWGADGYFKIK 312 (349)
Q Consensus 234 ~~~ik~~l~~~gPV~v~i~v~~~f~~y~~Giy~~~~~~~~~~Hav~IVGyg~~~~g~-~ywivkNSWG~~WG~~Gy~~i~ 312 (349)
.+.|+++|..+++|..+.... ....+|+|++=|+..|++|. .+-.|--|=-. =.-|-.|..
T Consensus 220 se~ike~L~~g~aiGLs~~~~----------------~~~~~H~ItvWGAE~De~Gnl~aIYvTDSDD~--~~vGmKRY~ 281 (323)
T 1y08_A 220 SDLIKKELTEGKALGLSHTYA----------------NVRINHVINLWGADFDSNGNLKAIYVTDSDSN--ASIGMKKYF 281 (323)
T ss_dssp HHHHHHHHHTTCEEEEEECC-------------------CCCEEEEEEEEEECTTSCEEEEEEECTTSC--TTTCEEEEE
T ss_pred HHHHHHHHhcCCeEEEEeecc----------------CcCCCcEEEEeeeEecCCCCEEEEEEecCCCc--cccceEEEE
Confidence 467899999988988776421 11148999999988666654 44444444222 124555554
Q ss_pred e
Q 018877 313 R 313 (349)
Q Consensus 313 ~ 313 (349)
.
T Consensus 282 V 282 (323)
T 1y08_A 282 V 282 (323)
T ss_dssp E
T ss_pred E
Confidence 4
Done!