Query 018887
Match_columns 349
No_of_seqs 191 out of 840
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:36:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iu1_A Glycylpeptide N-tetrade 10.4 39 0.0013 32.8 -1.2 28 256-297 171-198 (383)
2 1rxt_A Myristoyl-, glycylpepti 9.6 60 0.0021 32.5 -0.2 19 256-285 284-302 (496)
3 2i2j_A Signaling peptide UA159 8.7 1.7E+02 0.006 16.7 1.6 16 271-286 2-17 (26)
4 1iic_A Peptide N-myristoyltran 8.4 52 0.0018 32.3 -1.2 20 256-286 174-193 (422)
5 1iyk_A Myristoyl-COA:protein N 8.3 53 0.0018 31.9 -1.2 20 256-286 154-173 (392)
6 2wuu_A N-myristoyltransferase; 8.3 53 0.0018 32.2 -1.2 21 255-286 204-224 (421)
7 1hx1_B BAG-1, BAG-family molec 7.6 94 0.0032 24.9 0.2 18 249-266 67-84 (114)
8 4b14_A Glycylpeptide N-tetrade 7.5 61 0.0021 31.5 -1.2 19 256-285 174-192 (385)
9 3si5_X Protein CASC5; BUBR1-bl 6.9 1.8E+02 0.0063 16.6 1.1 11 165-175 11-21 (24)
10 1i6z_A BAG-family molecular ch 6.6 1.1E+02 0.0038 25.2 0.2 17 249-265 77-93 (135)
No 1
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A*
Probab=10.38 E-value=39 Score=32.77 Aligned_cols=28 Identities=36% Similarity=0.828 Sum_probs=19.7
Q ss_pred CccCCCCCCcccccccchhhhhhhhhhhHhHHHHHHHHHHHH
Q 018887 256 GIEAPENMPRCVNNCHNLETFWKNWHASFNKWLVRKLLSWAW 297 (349)
Q Consensus 256 Gi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~~Wl~r~ll~Wg~ 297 (349)
|+.+|.....| |+|||+||- ++|+-.|.
T Consensus 171 g~vLP~Pvstc-----------rY~HR~LN~---kKL~evgF 198 (383)
T 3iu1_A 171 GVVLPKPVGTC-----------RYWHRSLNP---RKLIEVKF 198 (383)
T ss_dssp SSCCSCCSEEE-----------EEEEEESSH---HHHHHTTS
T ss_pred ceecCCCceee-----------eeeeeECCH---HHHhhcCC
Confidence 66788855444 889999995 46666553
No 2
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2
Probab=9.64 E-value=60 Score=32.46 Aligned_cols=19 Identities=37% Similarity=0.959 Sum_probs=14.6
Q ss_pred CccCCCCCCcccccccchhhhhhhhhhhHh
Q 018887 256 GIEAPENMPRCVNNCHNLETFWKNWHASFN 285 (349)
Q Consensus 256 Gi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~ 285 (349)
|+.+|.-...| |+||||||
T Consensus 284 GvvLP~Pvstc-----------rY~HRsLN 302 (496)
T 1rxt_A 284 GVVLPKPVGTC-----------RYWHRSLN 302 (496)
T ss_dssp SSCCSSBSCCC-----------CCCCCCSS
T ss_pred CcccCCCceee-----------eeeeeeCC
Confidence 77788754444 88999999
No 3
>2i2j_A Signaling peptide UA159SP; helix, signaling protein; NMR {Synthetic}
Probab=8.68 E-value=1.7e+02 Score=16.69 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=11.5
Q ss_pred cchhhhhhhhhhhHhH
Q 018887 271 HNLETFWKNWHASFNK 286 (349)
Q Consensus 271 ~s~~~FWR~WH~Sl~~ 286 (349)
-|.+.|.|-+.||+.+
T Consensus 2 gslstffrlfnrsftq 17 (26)
T 2i2j_A 2 GSLSTFFRLFNRSFTQ 17 (26)
T ss_pred ccHHHHHHHHhHHHHH
Confidence 3667788888887765
No 4
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A*
Probab=8.41 E-value=52 Score=32.29 Aligned_cols=20 Identities=30% Similarity=0.557 Sum_probs=14.8
Q ss_pred CccCCCCCCcccccccchhhhhhhhhhhHhH
Q 018887 256 GIEAPENMPRCVNNCHNLETFWKNWHASFNK 286 (349)
Q Consensus 256 Gi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~~ 286 (349)
|+.+|.-...| |+||||||-
T Consensus 174 gvvLP~Pvstc-----------rY~HR~LN~ 193 (422)
T 1iic_A 174 GIVLPAPVSTC-----------RYTHRPLNW 193 (422)
T ss_dssp SSCCSCCSEEE-----------EEEEEESSH
T ss_pred ccccCCCcccc-----------ceeeeeCCH
Confidence 77788744433 889999984
No 5
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A
Probab=8.31 E-value=53 Score=31.95 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=14.4
Q ss_pred CccCCCCCCcccccccchhhhhhhhhhhHhH
Q 018887 256 GIEAPENMPRCVNNCHNLETFWKNWHASFNK 286 (349)
Q Consensus 256 Gi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~~ 286 (349)
|+.+|.-...| |+||||+|-
T Consensus 154 gvvLp~Pvstc-----------rY~HR~LN~ 173 (392)
T 1iyk_A 154 GSILPTPLTTC-----------RYQHRPINW 173 (392)
T ss_dssp CSCSSCCSEEE-----------EEEEEESSH
T ss_pred CcccCCCCeee-----------eeeeeeCCH
Confidence 67788744333 889999984
No 6
>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A*
Probab=8.26 E-value=53 Score=32.22 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=15.2
Q ss_pred hCccCCCCCCcccccccchhhhhhhhhhhHhH
Q 018887 255 CGIEAPENMPRCVNNCHNLETFWKNWHASFNK 286 (349)
Q Consensus 255 dGi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~~ 286 (349)
-|+.+|.-...| |+||||||-
T Consensus 204 ag~vLP~Pvstc-----------rY~HRsLN~ 224 (421)
T 2wuu_A 204 AGVLLPTPYASG-----------QYFHRSLNP 224 (421)
T ss_dssp ESSCCSCCSEEE-----------EEEEEESCH
T ss_pred cccccCCCcccc-----------ceeeeeCCH
Confidence 367788744443 889999985
No 7
>1hx1_B BAG-1, BAG-family molecular chaperone regulator-1; protein-protein complex, apoptosis, protein folding, molecul chaperone; 1.90A {Homo sapiens} SCOP: a.7.7.1 PDB: 3fzf_B* 3fzh_B* 3fzk_B* 3fzl_B* 3fzm_B* 3ldq_B* 3m3z_B*
Probab=7.62 E-value=94 Score=24.92 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=14.3
Q ss_pred HHHHHHhCccCCCCCCcc
Q 018887 249 RLWSLICGIEAPENMPRC 266 (349)
Q Consensus 249 r~~A~ldGi~~PeNf~rc 266 (349)
+.+=.+|++.+||||.+|
T Consensus 67 K~LE~lDsl~i~e~~~~~ 84 (114)
T 1hx1_B 67 KILEEIDTLILPENFKDS 84 (114)
T ss_dssp HHHHHHTTCCCCTTCHHH
T ss_pred HHHHHhhcccCChhHHHH
Confidence 356789999999999653
No 8
>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A*
Probab=7.49 E-value=61 Score=31.47 Aligned_cols=19 Identities=26% Similarity=0.592 Sum_probs=14.9
Q ss_pred CccCCCCCCcccccccchhhhhhhhhhhHh
Q 018887 256 GIEAPENMPRCVNNCHNLETFWKNWHASFN 285 (349)
Q Consensus 256 Gi~~PeNf~rc~~~~~s~~~FWR~WH~Sl~ 285 (349)
|+.+|..+..| |+|||++|
T Consensus 174 g~~lp~pvs~~-----------rY~HR~LN 192 (385)
T 4b14_A 174 GVYLPKPVSDA-----------RYYHRSIN 192 (385)
T ss_dssp SSCCSCCSEEE-----------EEEEEESS
T ss_pred CccCCCcceee-----------eeeeeeCC
Confidence 78888866544 67999998
No 9
>3si5_X Protein CASC5; BUBR1-blinkin complex, mitotic checkpoint, BUBR1, blinkin/KN chromosome segregation, cell cycle; 2.20A {Homo sapiens}
Probab=6.90 E-value=1.8e+02 Score=16.62 Aligned_cols=11 Identities=45% Similarity=0.848 Sum_probs=7.6
Q ss_pred cchHHHHHHhc
Q 018887 165 ISFNAFASQLE 175 (349)
Q Consensus 165 ~~~~df~~Q~~ 175 (349)
+.||||+..++
T Consensus 11 infndFIKRLK 21 (24)
T 3si5_X 11 IDFNDFIKRLK 21 (26)
T ss_pred ccHHHHHHHHh
Confidence 46778877665
No 10
>1i6z_A BAG-family molecular chaperone regulator-1; triple helix bundle; NMR {Mus musculus} SCOP: a.7.7.1
Probab=6.61 E-value=1.1e+02 Score=25.21 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.2
Q ss_pred HHHHHHhCccCCCCCCc
Q 018887 249 RLWSLICGIEAPENMPR 265 (349)
Q Consensus 249 r~~A~ldGi~~PeNf~r 265 (349)
+.+=.+||+.+|||+.+
T Consensus 77 k~LE~LDs~~ip~~~~~ 93 (135)
T 1i6z_A 77 KILEEIDTMVLPEQFKD 93 (135)
T ss_dssp HHHHHHHTCCCCSCCHH
T ss_pred HHHHHhccccCCccHHH
Confidence 45678999999999864
Done!