Query 018887
Match_columns 349
No_of_seqs 191 out of 840
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 07:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018887.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018887hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f7ua1 a.27.1.1 (A:484-607) A 9.7 49 0.0036 24.3 1.3 11 253-263 114-124 (124)
2 d2e74f1 f.23.25.1 (F:1-32) Pet 8.8 1.7E+02 0.012 16.2 3.1 15 7-21 12-26 (32)
3 d1hx1b_ a.7.7.1 (B:) BAG-famil 7.5 59 0.0043 24.1 0.9 19 248-266 66-84 (112)
4 d1lr7a1 g.3.11.3 (A:64-88) Dom 7.2 36 0.0026 18.3 -0.4 16 124-139 7-22 (26)
5 d1iq0a1 a.27.1.1 (A:467-592) A 6.5 82 0.006 23.1 1.3 11 253-263 116-126 (126)
6 d1nh1a_ e.45.1.1 (A:) Type III 4.3 1.7E+02 0.013 24.6 2.0 16 248-264 249-264 (290)
7 d1or7c_ a.180.1.1 (C:) N-termi 3.9 61 0.0044 21.4 -1.1 33 250-282 6-38 (66)
8 d2e74e1 f.23.24.1 (E:1-32) Pet 3.7 3.7E+02 0.027 14.6 3.4 13 3-15 6-18 (32)
9 d1o98a2 c.76.1.3 (A:2-76,A:311 3.5 2.4E+02 0.017 21.1 2.2 20 245-264 250-269 (275)
10 d2j6ba1 d.321.1.1 (A:1-109) Af 3.5 2.6E+02 0.019 20.2 2.2 16 248-263 49-64 (109)
No 1
>d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=9.69 E-value=49 Score=24.35 Aligned_cols=11 Identities=27% Similarity=0.459 Sum_probs=9.7
Q ss_pred HHhCccCCCCC
Q 018887 253 LICGIEAPENM 263 (349)
Q Consensus 253 ~ldGi~~PeNf 263 (349)
.+.||++||.|
T Consensus 114 ~lLGI~~~e~M 124 (124)
T d1f7ua1 114 RLLGLTPVERM 124 (124)
T ss_dssp HHHTCCCCSCC
T ss_pred hhcCCCccccC
Confidence 67899999977
No 2
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=8.75 E-value=1.7e+02 Score=16.22 Aligned_cols=15 Identities=13% Similarity=0.248 Sum_probs=8.8
Q ss_pred HHHHHHHHHHhhHHH
Q 018887 7 FISFIYLFYLHGACV 21 (349)
Q Consensus 7 ~~s~~F~~~~~g~~~ 21 (349)
-|+++|+.+..|.-.
T Consensus 12 sfglifvgwglgall 26 (32)
T d2e74f1 12 SFGLIFVGWGLGVLL 26 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhHHHHHH
Confidence 466777666555433
No 3
>d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.50 E-value=59 Score=24.10 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHHHhCccCCCCCCcc
Q 018887 248 FRLWSLICGIEAPENMPRC 266 (349)
Q Consensus 248 ar~~A~ldGi~~PeNf~rc 266 (349)
-+.+=.+|++.+||||.+|
T Consensus 66 Mk~LE~LDsl~lp~~~~~~ 84 (112)
T d1hx1b_ 66 MKILEEIDTLILPENFKDS 84 (112)
T ss_dssp HHHHHHHTTCCCCTTCHHH
T ss_pred HHHHHHhhhccCcHHHHHH
Confidence 3567899999999998653
No 4
>d1lr7a1 g.3.11.3 (A:64-88) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.22 E-value=36 Score=18.33 Aligned_cols=16 Identities=25% Similarity=0.567 Sum_probs=11.2
Q ss_pred ccccCcchhhhhhhhc
Q 018887 124 VCKSGKLCYQIQQERN 139 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~ 139 (349)
+|++|+.|...++.+|
T Consensus 7 dcgpgk~c~mnrrnkp 22 (26)
T d1lr7a1 7 DCGPGKKCRMNKKNKP 22 (26)
T ss_dssp CCCTTEEEEECTTSCE
T ss_pred ccCCCccccccccCCC
Confidence 5778888776666654
No 5
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=6.53 E-value=82 Score=23.06 Aligned_cols=11 Identities=55% Similarity=0.700 Sum_probs=9.3
Q ss_pred HHhCccCCCCC
Q 018887 253 LICGIEAPENM 263 (349)
Q Consensus 253 ~ldGi~~PeNf 263 (349)
.+.||++||-|
T Consensus 116 ~lLGI~~~e~M 126 (126)
T d1iq0a1 116 DLLGIPAPEVM 126 (126)
T ss_dssp HHTTCCCCSCC
T ss_pred hhcCCCccccC
Confidence 57899999976
No 6
>d1nh1a_ e.45.1.1 (A:) Type III effector AvrB {Pseudomonas syringae [TaxId: 317]}
Probab=4.26 E-value=1.7e+02 Score=24.57 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=14.0
Q ss_pred HHHHHHHhCccCCCCCC
Q 018887 248 FRLWSLICGIEAPENMP 264 (349)
Q Consensus 248 ar~~A~ldGi~~PeNf~ 264 (349)
+|.+|..-|||+|+ |.
T Consensus 249 ~RsIA~A~GidLPP-~r 264 (290)
T d1nh1a_ 249 ARAIASAHGIELPP-FR 264 (290)
T ss_dssp HHHHHHHTTCCCCC-BC
T ss_pred HHHHHHHhCCCCCC-Cc
Confidence 57889999999998 74
No 7
>d1or7c_ a.180.1.1 (C:) N-terminal, cytoplasmic domain of anti-sigmaE factor RseA {Escherichia coli [TaxId: 562]}
Probab=3.89 E-value=61 Score=21.42 Aligned_cols=33 Identities=15% Similarity=0.347 Sum_probs=18.7
Q ss_pred HHHHHhCccCCCCCCcccccccchhhhhhhhhh
Q 018887 250 LWSLICGIEAPENMPRCVNNCHNLETFWKNWHA 282 (349)
Q Consensus 250 ~~A~ldGi~~PeNf~rc~~~~~s~~~FWR~WH~ 282 (349)
.-|++||=-......+-...+....+.|+|.|.
T Consensus 6 lSAL~DgE~~~~el~~~l~~d~e~~~~W~~Yhl 38 (66)
T d1or7c_ 6 LSALMDGETLDSELLNELAHNPEMQKTWESYHL 38 (66)
T ss_dssp HHHHHTTSCCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHhcCHHHHHHHHHHHH
Confidence 356777732221122223456677888999885
No 8
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=3.71 E-value=3.7e+02 Score=14.55 Aligned_cols=13 Identities=0% Similarity=0.334 Sum_probs=5.9
Q ss_pred hHHHHHHHHHHHH
Q 018887 3 ILWLFISFIYLFY 15 (349)
Q Consensus 3 ~~~l~~s~~F~~~ 15 (349)
.||+++-.+|+..
T Consensus 6 vfyivfialffgi 18 (32)
T d2e74e1 6 VFYIVFIALFFGI 18 (32)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHH
Confidence 3455544444433
No 9
>d1o98a2 c.76.1.3 (A:2-76,A:311-510) 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=3.49 E-value=2.4e+02 Score=21.08 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhCccCCCCCC
Q 018887 245 WRYFRLWSLICGIEAPENMP 264 (349)
Q Consensus 245 ~~~ar~~A~ldGi~~PeNf~ 264 (349)
.|++=.+..+.|++.|+++.
T Consensus 250 ~Di~PTil~l~Gi~~P~~~~ 269 (275)
T d1o98a2 250 GDLAPTMLDLLGLPQPKEMT 269 (275)
T ss_dssp GGHHHHHHHHHTCCCCTTCC
T ss_pred eeHHHHHHHHhCcCCCCCCc
Confidence 48888999999999999874
No 10
>d2j6ba1 d.321.1.1 (A:1-109) Afv3-109 {Acidianus filamentous virus 1 [TaxId: 235266]}
Probab=3.46 E-value=2.6e+02 Score=20.24 Aligned_cols=16 Identities=38% Similarity=0.468 Sum_probs=12.2
Q ss_pred HHHHHHHhCccCCCCC
Q 018887 248 FRLWSLICGIEAPENM 263 (349)
Q Consensus 248 ar~~A~ldGi~~PeNf 263 (349)
|-.++.++|+++|.|-
T Consensus 49 Aqlls~Llgv~i~~NR 64 (109)
T d2j6ba1 49 AELLSSILGVNVPMNR 64 (109)
T ss_dssp HHHHHHHHTSCCCBCC
T ss_pred HHHHHHHhCcccccce
Confidence 3356778899999874
Done!