Query 018892
Match_columns 349
No_of_seqs 140 out of 496
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:40:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 100.0 2E-97 7E-102 728.2 23.9 334 2-349 23-358 (359)
2 2efj_A 3,7-dimethylxanthine me 100.0 2E-94 6.8E-99 712.3 31.6 337 4-349 24-379 (384)
3 3b5i_A S-adenosyl-L-methionine 100.0 4.1E-91 1.4E-95 687.4 25.9 335 2-346 23-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.3 4.7E-10 1.6E-14 104.1 20.9 203 29-332 57-259 (279)
5 2p35_A Trans-aconitate 2-methy 99.2 2.4E-09 8.3E-14 97.4 20.1 204 29-332 33-238 (259)
6 2yqz_A Hypothetical protein TT 99.1 5.7E-09 2E-13 94.9 17.7 223 28-349 38-263 (263)
7 3bus_A REBM, methyltransferase 98.9 2.3E-07 7.7E-12 85.1 19.7 157 29-269 61-217 (273)
8 3hem_A Cyclopropane-fatty-acyl 98.8 5.4E-07 1.9E-11 84.4 21.7 226 29-343 72-300 (302)
9 3dtn_A Putative methyltransfer 98.8 1.4E-07 4.7E-12 84.6 16.3 172 28-271 43-217 (234)
10 3ujc_A Phosphoethanolamine N-m 98.7 7.4E-07 2.5E-11 80.8 18.8 153 28-268 54-206 (266)
11 3f4k_A Putative methyltransfer 98.7 2.7E-06 9.1E-11 77.1 21.5 211 29-348 46-257 (257)
12 3sm3_A SAM-dependent methyltra 98.7 7.9E-07 2.7E-11 79.0 16.0 178 28-271 29-210 (235)
13 1vl5_A Unknown conserved prote 98.6 2.5E-06 8.6E-11 77.7 18.6 157 29-271 37-193 (260)
14 3mgg_A Methyltransferase; NYSG 98.6 1E-06 3.6E-11 80.9 15.4 163 28-271 36-201 (276)
15 4htf_A S-adenosylmethionine-de 98.6 2.3E-07 7.7E-12 86.0 10.8 168 28-271 67-235 (285)
16 3hnr_A Probable methyltransfer 98.6 6.5E-07 2.2E-11 79.3 13.3 162 29-273 45-206 (220)
17 3kkz_A Uncharacterized protein 98.6 9.5E-06 3.2E-10 74.3 21.6 212 28-348 45-257 (267)
18 1kpg_A CFA synthase;, cyclopro 98.5 7.3E-06 2.5E-10 75.7 20.0 101 123-268 126-228 (287)
19 2aot_A HMT, histamine N-methyl 98.5 1.3E-06 4.4E-11 81.6 14.6 178 12-265 33-218 (292)
20 4gek_A TRNA (CMO5U34)-methyltr 98.5 1.8E-06 6.1E-11 80.2 15.5 165 29-262 70-239 (261)
21 2o57_A Putative sarcosine dime 98.5 2.2E-05 7.6E-10 72.8 21.1 153 29-268 82-234 (297)
22 1xxl_A YCGJ protein; structura 98.5 9.9E-06 3.4E-10 73.1 17.8 157 29-271 21-177 (239)
23 3h2b_A SAM-dependent methyltra 98.4 6.6E-07 2.3E-11 78.3 9.2 96 114-270 89-184 (203)
24 3bgv_A MRNA CAP guanine-N7 met 98.4 1.6E-06 5.4E-11 81.7 11.7 101 125-269 112-233 (313)
25 3lcc_A Putative methyl chlorid 98.4 2.5E-06 8.6E-11 76.5 12.5 144 30-271 67-210 (235)
26 2fk8_A Methoxy mycolic acid sy 98.4 2E-05 6.7E-10 74.1 18.8 100 126-268 154-254 (318)
27 3dli_A Methyltransferase; PSI- 98.4 1.3E-05 4.5E-10 72.1 16.7 90 122-269 96-185 (240)
28 3dh0_A SAM dependent methyltra 98.4 6E-06 2.1E-10 72.9 13.6 145 29-268 37-181 (219)
29 3ou2_A SAM-dependent methyltra 98.3 6.3E-06 2.2E-10 72.3 12.4 157 30-269 47-206 (218)
30 1xtp_A LMAJ004091AAA; SGPP, st 98.2 1.1E-05 3.9E-10 72.6 12.6 94 114-268 145-238 (254)
31 3ege_A Putative methyltransfer 98.2 1.8E-05 6.1E-10 72.5 14.1 150 29-273 34-183 (261)
32 2p7i_A Hypothetical protein; p 98.2 9.8E-06 3.3E-10 72.2 11.4 103 116-269 93-200 (250)
33 3g5t_A Trans-aconitate 3-methy 98.2 8.5E-05 2.9E-09 69.2 18.2 153 29-258 36-195 (299)
34 1ri5_A MRNA capping enzyme; me 98.2 3.4E-05 1.1E-09 71.0 14.9 167 29-269 64-251 (298)
35 3dlc_A Putative S-adenosyl-L-m 98.2 4.3E-06 1.5E-10 73.2 8.3 157 31-266 45-201 (219)
36 1nkv_A Hypothetical protein YJ 98.2 2.2E-05 7.5E-10 70.9 13.0 151 29-267 36-186 (256)
37 2a14_A Indolethylamine N-methy 98.2 1.6E-05 5.4E-10 73.2 12.1 86 125-269 154-239 (263)
38 3reo_A (ISO)eugenol O-methyltr 98.1 0.00013 4.4E-09 70.7 18.9 154 28-268 202-355 (368)
39 3vc1_A Geranyl diphosphate 2-C 98.1 0.00017 5.7E-09 67.7 19.1 154 28-268 116-269 (312)
40 2g72_A Phenylethanolamine N-me 98.1 4.8E-06 1.6E-10 77.4 8.1 91 122-271 169-259 (289)
41 1pjz_A Thiopurine S-methyltran 98.1 3.2E-05 1.1E-09 68.4 13.2 89 116-270 89-178 (203)
42 3i53_A O-methyltransferase; CO 98.1 0.00013 4.5E-09 69.1 18.2 153 28-267 168-320 (332)
43 3e23_A Uncharacterized protein 98.1 1.6E-05 5.4E-10 69.9 10.8 141 29-269 43-183 (211)
44 3gwz_A MMCR; methyltransferase 98.1 0.00012 4.2E-09 70.7 18.1 155 28-267 201-355 (369)
45 3cc8_A Putative methyltransfer 98.1 2.5E-05 8.6E-10 68.7 12.1 154 28-270 31-187 (230)
46 2ex4_A Adrenal gland protein A 98.1 2.1E-05 7.2E-10 70.8 11.8 92 115-268 134-225 (241)
47 4hg2_A Methyltransferase type 98.1 4E-05 1.4E-09 71.0 13.9 102 30-203 40-141 (257)
48 3l8d_A Methyltransferase; stru 98.1 2.2E-05 7.4E-10 70.2 11.5 148 29-268 53-200 (242)
49 3p9c_A Caffeic acid O-methyltr 98.1 0.0002 6.8E-09 69.3 18.7 153 28-268 200-353 (364)
50 1y8c_A S-adenosylmethionine-de 98.1 4.7E-05 1.6E-09 67.8 12.9 107 29-199 37-144 (246)
51 3mcz_A O-methyltransferase; ad 98.1 0.00014 4.8E-09 69.2 16.9 155 30-264 180-335 (352)
52 1vlm_A SAM-dependent methyltra 98.1 4.1E-05 1.4E-09 68.0 12.3 92 122-268 97-188 (219)
53 3ocj_A Putative exported prote 98.0 6E-05 2E-09 70.6 13.7 168 28-267 117-290 (305)
54 2kw5_A SLR1183 protein; struct 98.0 3.4E-05 1.2E-09 67.2 11.1 144 32-272 32-175 (202)
55 3lst_A CALO1 methyltransferase 98.0 5.8E-05 2E-09 72.3 13.6 153 28-267 183-335 (348)
56 2vdw_A Vaccinia virus capping 98.0 5.9E-05 2E-09 71.4 13.4 115 123-269 125-247 (302)
57 3bkx_A SAM-dependent methyltra 98.0 0.00036 1.2E-08 63.6 18.4 168 29-268 43-219 (275)
58 3g5l_A Putative S-adenosylmeth 98.0 1.4E-05 4.9E-10 72.2 8.3 167 29-268 44-216 (253)
59 1qzz_A RDMB, aclacinomycin-10- 98.0 0.0002 7E-09 68.6 16.7 158 28-269 181-340 (374)
60 3e8s_A Putative SAM dependent 98.0 3.3E-05 1.1E-09 67.8 10.2 92 123-267 112-208 (227)
61 3pfg_A N-methyltransferase; N, 98.0 3.7E-05 1.3E-09 70.0 10.7 46 125-200 108-154 (263)
62 3dp7_A SAM-dependent methyltra 98.0 0.00012 4E-09 70.7 14.7 160 29-266 179-340 (363)
63 2ip2_A Probable phenazine-spec 97.9 0.00084 2.9E-08 63.3 20.1 152 31-267 169-321 (334)
64 4a6d_A Hydroxyindole O-methylt 97.9 0.00016 5.6E-09 69.6 15.2 154 29-266 179-332 (353)
65 2r3s_A Uncharacterized protein 97.9 0.00019 6.3E-09 67.7 15.1 158 28-266 164-321 (335)
66 3g2m_A PCZA361.24; SAM-depende 97.9 2.2E-05 7.6E-10 73.2 7.8 117 116-269 140-275 (299)
67 3cgg_A SAM-dependent methyltra 97.9 9.7E-05 3.3E-09 63.1 10.7 77 116-266 96-173 (195)
68 2gb4_A Thiopurine S-methyltran 97.9 0.00038 1.3E-08 64.1 15.4 89 116-270 140-229 (252)
69 2gs9_A Hypothetical protein TT 97.9 0.00012 4E-09 64.2 11.4 87 117-258 85-171 (211)
70 3jwh_A HEN1; methyltransferase 97.8 8.9E-05 3E-09 65.5 10.3 156 30-265 30-189 (217)
71 2i62_A Nicotinamide N-methyltr 97.8 0.00014 4.9E-09 65.6 11.9 98 115-271 141-242 (265)
72 1tw3_A COMT, carminomycin 4-O- 97.8 0.00054 1.8E-08 65.4 16.4 158 29-270 183-341 (360)
73 3bkw_A MLL3908 protein, S-aden 97.8 3.8E-05 1.3E-09 68.5 7.8 116 114-268 94-214 (243)
74 1x19_A CRTF-related protein; m 97.8 0.00068 2.3E-08 64.9 16.2 159 28-268 189-348 (359)
75 2p8j_A S-adenosylmethionine-de 97.8 0.00024 8.1E-09 61.9 11.9 153 29-259 23-175 (209)
76 4fsd_A Arsenic methyltransfera 97.8 0.00013 4.6E-09 70.9 11.0 118 29-202 83-208 (383)
77 3ggd_A SAM-dependent methyltra 97.8 0.00016 5.4E-09 64.9 10.8 94 127-269 124-220 (245)
78 3jwg_A HEN1, methyltransferase 97.7 0.00014 5E-09 64.1 10.3 158 29-266 29-190 (219)
79 2xvm_A Tellurite resistance pr 97.7 0.00025 8.5E-09 61.0 11.6 141 30-268 33-173 (199)
80 3i9f_A Putative type 11 methyl 97.7 0.0006 2E-08 57.5 13.7 80 121-268 69-148 (170)
81 4e2x_A TCAB9; kijanose, tetron 97.7 0.00011 3.8E-09 71.8 10.2 87 123-269 167-254 (416)
82 1fp1_D Isoliquiritigenin 2'-O- 97.7 0.00058 2E-08 65.8 14.8 150 28-268 208-360 (372)
83 3gu3_A Methyltransferase; alph 97.7 0.0003 1E-08 65.1 12.1 108 28-199 21-128 (284)
84 3m70_A Tellurite resistance pr 97.7 0.00015 5E-09 66.9 9.5 139 29-266 120-258 (286)
85 2qe6_A Uncharacterized protein 97.7 0.0011 3.9E-08 61.5 15.6 97 122-274 152-249 (274)
86 3giw_A Protein of unknown func 97.6 0.00046 1.6E-08 64.9 12.4 180 11-275 62-255 (277)
87 3bxo_A N,N-dimethyltransferase 97.6 0.00049 1.7E-08 61.0 11.9 47 125-201 98-145 (239)
88 2zfu_A Nucleomethylin, cerebra 97.6 0.0002 6.8E-09 63.0 9.0 68 123-267 111-178 (215)
89 1ve3_A Hypothetical protein PH 97.5 0.00057 2E-08 60.1 11.0 55 115-200 91-145 (227)
90 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00045 1.5E-08 66.2 10.8 149 29-267 193-346 (358)
91 2ld4_A Anamorsin; methyltransf 97.5 0.00023 7.9E-09 60.8 7.8 72 123-263 59-130 (176)
92 1fp2_A Isoflavone O-methyltran 97.4 0.0014 4.7E-08 62.7 12.9 150 29-267 188-340 (352)
93 3thr_A Glycine N-methyltransfe 97.4 0.00024 8.3E-09 65.4 7.2 52 122-199 125-177 (293)
94 3ofk_A Nodulation protein S; N 97.4 0.00031 1.1E-08 61.6 7.2 107 28-199 50-156 (216)
95 1yzh_A TRNA (guanine-N(7)-)-me 97.3 0.0035 1.2E-07 55.2 13.2 167 30-265 42-210 (214)
96 2avn_A Ubiquinone/menaquinone 97.2 0.0013 4.5E-08 59.7 9.6 155 29-268 54-213 (260)
97 3grz_A L11 mtase, ribosomal pr 97.2 0.001 3.5E-08 58.0 8.2 130 29-273 60-189 (205)
98 3opn_A Putative hemolysin; str 97.2 0.0007 2.4E-08 61.5 7.2 162 13-268 23-184 (232)
99 3g07_A 7SK snRNA methylphospha 97.1 0.00054 1.8E-08 63.9 6.1 48 123-197 173-220 (292)
100 3d2l_A SAM-dependent methyltra 97.1 0.0032 1.1E-07 55.8 10.3 53 116-199 86-139 (243)
101 1dus_A MJ0882; hypothetical pr 97.0 0.0033 1.1E-07 53.3 9.9 53 115-200 108-160 (194)
102 3dmg_A Probable ribosomal RNA 97.0 0.0022 7.6E-08 62.6 9.5 108 29-197 233-340 (381)
103 4df3_A Fibrillarin-like rRNA/T 96.9 0.0034 1.2E-07 57.4 9.4 108 29-200 77-185 (233)
104 1wzn_A SAM-dependent methyltra 96.8 0.0065 2.2E-07 54.3 10.1 120 12-199 27-147 (252)
105 2pxx_A Uncharacterized protein 96.8 0.0094 3.2E-07 51.5 10.6 62 122-201 102-163 (215)
106 3q87_B N6 adenine specific DNA 96.8 0.0023 7.7E-08 54.7 6.4 28 115-143 67-94 (170)
107 3q7e_A Protein arginine N-meth 96.7 0.0041 1.4E-07 59.7 8.9 105 30-195 67-171 (349)
108 2plw_A Ribosomal RNA methyltra 96.7 0.0059 2E-07 52.7 8.9 55 123-199 102-156 (201)
109 3hp7_A Hemolysin, putative; st 96.7 0.0031 1.1E-07 59.6 7.6 158 14-268 72-232 (291)
110 3lbf_A Protein-L-isoaspartate 96.7 0.0034 1.2E-07 54.7 7.2 100 29-199 77-176 (210)
111 1ej0_A FTSJ; methyltransferase 96.7 0.008 2.7E-07 49.7 9.2 56 123-200 84-139 (180)
112 3mti_A RRNA methylase; SAM-dep 96.7 0.018 6.3E-07 48.9 11.6 20 29-48 22-41 (185)
113 2fca_A TRNA (guanine-N(7)-)-me 96.6 0.0095 3.3E-07 52.7 9.8 113 30-197 39-153 (213)
114 3e05_A Precorrin-6Y C5,15-meth 96.6 0.013 4.4E-07 50.9 10.5 104 29-198 40-143 (204)
115 3mq2_A 16S rRNA methyltransfer 96.6 0.0074 2.5E-07 52.9 9.0 35 29-78 27-61 (218)
116 3uwp_A Histone-lysine N-methyl 96.6 0.014 4.8E-07 58.0 11.5 112 29-196 173-287 (438)
117 1af7_A Chemotaxis receptor met 96.6 0.013 4.4E-07 54.7 10.7 40 125-195 211-250 (274)
118 1zx0_A Guanidinoacetate N-meth 96.5 0.011 3.6E-07 52.8 9.6 55 114-197 113-170 (236)
119 3p9n_A Possible methyltransfer 96.5 0.042 1.4E-06 47.0 13.0 111 29-202 44-158 (189)
120 3hm2_A Precorrin-6Y C5,15-meth 96.5 0.025 8.6E-07 47.4 11.1 103 29-199 25-129 (178)
121 3iv6_A Putative Zn-dependent a 96.4 0.0066 2.2E-07 56.4 7.8 42 125-198 108-149 (261)
122 3dxy_A TRNA (guanine-N(7)-)-me 96.4 0.0024 8.3E-08 57.2 4.6 114 29-197 34-150 (218)
123 2pjd_A Ribosomal RNA small sub 96.4 0.0018 6.1E-08 61.9 3.8 107 31-198 198-304 (343)
124 2yxe_A Protein-L-isoaspartate 96.4 0.013 4.3E-07 51.2 8.8 103 29-199 77-179 (215)
125 3evz_A Methyltransferase; NYSG 96.3 0.046 1.6E-06 48.1 12.3 62 123-198 119-180 (230)
126 3r0q_C Probable protein argini 96.3 0.016 5.6E-07 56.0 10.0 107 29-197 63-169 (376)
127 2nxc_A L11 mtase, ribosomal pr 96.2 0.018 6.1E-07 52.5 9.3 20 247-267 224-243 (254)
128 4dcm_A Ribosomal RNA large sub 96.2 0.017 5.9E-07 56.1 9.3 111 31-197 224-334 (375)
129 4dzr_A Protein-(glutamine-N5) 96.1 0.0058 2E-07 52.7 5.0 129 28-198 29-165 (215)
130 1xdz_A Methyltransferase GIDB; 96.0 0.09 3.1E-06 46.9 12.9 20 29-48 70-89 (240)
131 3m33_A Uncharacterized protein 96.0 0.019 6.4E-07 50.9 8.3 20 29-48 48-67 (226)
132 3p2e_A 16S rRNA methylase; met 96.0 0.018 6.2E-07 51.6 8.2 68 177-269 119-186 (225)
133 2pbf_A Protein-L-isoaspartate 96.0 0.0098 3.4E-07 52.5 6.1 109 29-199 80-195 (227)
134 1vbf_A 231AA long hypothetical 95.9 0.017 5.9E-07 50.9 7.4 47 115-200 122-168 (231)
135 3eey_A Putative rRNA methylase 95.8 0.03 1E-06 48.1 8.5 117 30-198 23-140 (197)
136 2fyt_A Protein arginine N-meth 95.8 0.068 2.3E-06 50.9 11.5 104 30-194 65-168 (340)
137 2h00_A Methyltransferase 10 do 95.8 0.14 4.7E-06 45.9 13.0 21 29-49 65-85 (254)
138 1o9g_A RRNA methyltransferase; 95.8 0.11 3.6E-06 46.7 12.1 22 29-50 51-72 (250)
139 3lpm_A Putative methyltransfer 95.8 0.026 8.8E-07 51.2 8.1 126 29-197 49-176 (259)
140 2yxd_A Probable cobalt-precorr 95.7 0.068 2.3E-06 44.6 9.9 75 29-136 35-109 (183)
141 2b3t_A Protein methyltransfera 95.6 0.1 3.5E-06 47.6 11.8 128 29-197 109-238 (276)
142 1jg1_A PIMT;, protein-L-isoasp 95.5 0.049 1.7E-06 48.4 8.8 19 30-48 92-110 (235)
143 1g6q_1 HnRNP arginine N-methyl 95.5 0.042 1.4E-06 52.0 8.8 104 30-194 39-142 (328)
144 2nyu_A Putative ribosomal RNA 95.5 0.0098 3.3E-07 51.0 3.9 118 29-199 22-147 (196)
145 1r18_A Protein-L-isoaspartate( 95.5 0.035 1.2E-06 49.1 7.6 110 30-199 85-196 (227)
146 1fbn_A MJ fibrillarin homologu 95.4 0.23 8E-06 43.8 13.0 21 29-49 74-94 (230)
147 1jsx_A Glucose-inhibited divis 95.4 0.027 9.1E-07 48.7 6.4 100 30-197 66-165 (207)
148 1u2z_A Histone-lysine N-methyl 95.3 0.093 3.2E-06 52.1 10.9 21 29-49 242-262 (433)
149 3mb5_A SAM-dependent methyltra 95.3 0.03 1E-06 50.2 6.8 76 29-133 93-168 (255)
150 1i1n_A Protein-L-isoaspartate 95.3 0.042 1.4E-06 48.3 7.4 20 29-48 77-96 (226)
151 1ws6_A Methyltransferase; stru 95.2 0.24 8.2E-06 40.8 11.8 19 30-48 42-60 (171)
152 1dl5_A Protein-L-isoaspartate 95.1 0.059 2E-06 50.6 8.4 103 30-200 76-178 (317)
153 2b25_A Hypothetical protein; s 95.1 0.029 9.9E-07 53.0 6.2 20 30-49 106-125 (336)
154 3fzg_A 16S rRNA methylase; met 95.1 0.0094 3.2E-07 53.3 2.6 83 28-142 48-130 (200)
155 3sso_A Methyltransferase; macr 95.0 0.13 4.6E-06 50.7 10.8 126 28-226 215-359 (419)
156 1l3i_A Precorrin-6Y methyltran 94.9 0.15 5.1E-06 42.7 9.7 20 29-48 33-52 (192)
157 3orh_A Guanidinoacetate N-meth 94.9 0.08 2.7E-06 47.5 8.4 22 175-196 148-169 (236)
158 3id6_C Fibrillarin-like rRNA/T 94.9 0.14 4.7E-06 46.5 10.0 21 29-49 76-96 (232)
159 1nt2_A Fibrillarin-like PRE-rR 94.8 0.077 2.6E-06 46.9 7.8 20 29-48 57-76 (210)
160 1p91_A Ribosomal RNA large sub 94.8 0.096 3.3E-06 47.2 8.6 20 29-48 85-104 (269)
161 3bwc_A Spermidine synthase; SA 94.6 0.11 3.7E-06 48.7 8.8 20 28-47 94-113 (304)
162 3u81_A Catechol O-methyltransf 94.6 0.066 2.3E-06 47.1 6.9 20 29-48 58-77 (221)
163 2y1w_A Histone-arginine methyl 94.4 0.14 4.9E-06 48.7 9.3 18 30-47 51-68 (348)
164 1uir_A Polyamine aminopropyltr 94.4 0.094 3.2E-06 49.4 7.8 49 124-199 148-197 (314)
165 2ift_A Putative methylase HI07 94.3 0.17 5.7E-06 44.1 8.7 19 30-48 54-72 (201)
166 3njr_A Precorrin-6Y methylase; 94.2 0.19 6.4E-06 43.9 8.9 20 29-48 55-74 (204)
167 3ckk_A TRNA (guanine-N(7)-)-me 94.2 0.078 2.7E-06 47.8 6.5 123 28-197 45-168 (235)
168 2ozv_A Hypothetical protein AT 94.2 0.27 9.1E-06 44.7 10.2 61 122-198 110-171 (260)
169 2hnk_A SAM-dependent O-methylt 94.0 0.71 2.4E-05 40.8 12.5 20 30-49 61-80 (239)
170 3fpf_A Mtnas, putative unchara 94.0 0.27 9.1E-06 46.5 9.9 21 28-48 121-141 (298)
171 4hc4_A Protein arginine N-meth 94.0 0.11 3.9E-06 50.5 7.6 20 175-194 167-186 (376)
172 3bzb_A Uncharacterized protein 93.9 0.38 1.3E-05 44.2 10.8 94 30-141 80-177 (281)
173 3gdh_A Trimethylguanosine synt 93.9 0.009 3.1E-07 53.2 -0.4 83 30-144 79-161 (241)
174 1sqg_A SUN protein, FMU protei 93.8 0.25 8.6E-06 48.4 9.8 126 30-200 247-377 (429)
175 3gjy_A Spermidine synthase; AP 93.8 0.25 8.5E-06 47.0 9.4 48 123-199 155-202 (317)
176 2ipx_A RRNA 2'-O-methyltransfe 93.8 0.23 7.8E-06 43.8 8.7 21 29-49 77-97 (233)
177 2gpy_A O-methyltransferase; st 93.8 0.1 3.6E-06 46.0 6.4 19 30-48 55-73 (233)
178 1ixk_A Methyltransferase; open 93.7 0.21 7.3E-06 46.9 8.7 127 30-199 119-248 (315)
179 1o54_A SAM-dependent O-methylt 93.6 0.17 6E-06 46.0 7.8 75 30-133 113-187 (277)
180 2esr_A Methyltransferase; stru 93.6 0.09 3.1E-06 44.1 5.4 20 29-48 31-50 (177)
181 3ntv_A MW1564 protein; rossman 93.4 0.25 8.4E-06 43.9 8.2 20 29-48 71-90 (232)
182 1wxx_A TT1595, hypothetical pr 93.3 2 6.9E-05 41.1 15.2 29 171-199 299-327 (382)
183 1i9g_A Hypothetical protein RV 93.2 0.21 7.2E-06 45.2 7.7 78 30-133 100-177 (280)
184 1yb2_A Hypothetical protein TA 93.2 0.12 4E-06 47.3 5.9 75 29-133 110-185 (275)
185 3htx_A HEN1; HEN1, small RNA m 92.8 0.36 1.2E-05 51.9 9.5 116 29-200 721-837 (950)
186 3duw_A OMT, O-methyltransferas 92.7 1.8 6.1E-05 37.4 12.8 20 29-48 58-77 (223)
187 3dr5_A Putative O-methyltransf 92.7 0.23 7.9E-06 44.1 6.9 19 31-49 58-76 (221)
188 3tr6_A O-methyltransferase; ce 92.5 1.5 5.1E-05 37.9 11.9 19 30-48 65-83 (225)
189 3tma_A Methyltransferase; thum 92.4 0.32 1.1E-05 46.2 8.0 130 13-198 189-318 (354)
190 3tfw_A Putative O-methyltransf 92.4 0.47 1.6E-05 42.6 8.7 20 29-48 63-82 (248)
191 2frx_A Hypothetical protein YE 92.4 0.4 1.4E-05 48.1 8.9 128 30-200 118-249 (479)
192 2xyq_A Putative 2'-O-methyl tr 92.3 0.73 2.5E-05 43.1 10.1 22 177-198 151-172 (290)
193 1xj5_A Spermidine synthase 1; 92.3 0.58 2E-05 44.5 9.6 20 28-47 119-138 (334)
194 2pt6_A Spermidine synthase; tr 92.1 0.87 3E-05 42.9 10.5 20 28-47 115-134 (321)
195 3g89_A Ribosomal RNA small sub 91.8 0.46 1.6E-05 43.0 8.0 20 29-48 80-99 (249)
196 1inl_A Spermidine synthase; be 91.7 0.62 2.1E-05 43.3 8.9 20 28-47 89-108 (296)
197 3adn_A Spermidine synthase; am 91.5 1.1 3.8E-05 41.7 10.5 116 28-198 82-199 (294)
198 2yxl_A PH0851 protein, 450AA l 91.5 1.3 4.3E-05 43.7 11.4 128 30-200 260-392 (450)
199 3ajd_A Putative methyltransfer 91.4 0.17 5.8E-06 46.4 4.5 27 174-200 188-214 (274)
200 2i7c_A Spermidine synthase; tr 90.9 2.1 7.3E-05 39.3 11.7 20 28-47 77-96 (283)
201 1iy9_A Spermidine synthase; ro 90.9 0.76 2.6E-05 42.2 8.6 20 28-47 74-93 (275)
202 2as0_A Hypothetical protein PH 90.8 3.7 0.00013 39.4 13.7 29 171-199 309-337 (396)
203 2b78_A Hypothetical protein SM 90.8 4.1 0.00014 39.1 14.0 27 173-199 307-333 (385)
204 2pwy_A TRNA (adenine-N(1)-)-me 90.7 0.28 9.7E-06 43.5 5.2 21 29-49 96-116 (258)
205 3b3j_A Histone-arginine methyl 90.6 1.6 5.5E-05 43.6 11.2 17 30-46 159-175 (480)
206 2avd_A Catechol-O-methyltransf 90.5 1.7 5.7E-05 37.7 10.1 20 29-48 69-88 (229)
207 2igt_A SAM dependent methyltra 90.5 2.3 8E-05 40.1 11.8 28 173-200 248-275 (332)
208 3lcv_B Sisomicin-gentamicin re 90.1 0.41 1.4E-05 44.7 5.8 117 28-176 131-259 (281)
209 3m6w_A RRNA methylase; rRNA me 90.0 0.85 2.9E-05 45.6 8.6 126 30-199 102-231 (464)
210 2yvl_A TRMI protein, hypotheti 89.7 0.96 3.3E-05 39.7 7.9 21 29-49 91-111 (248)
211 1mjf_A Spermidine synthase; sp 89.6 0.45 1.5E-05 43.8 5.7 21 28-48 74-94 (281)
212 2b2c_A Spermidine synthase; be 89.3 0.94 3.2E-05 42.7 7.8 20 28-47 107-126 (314)
213 2frn_A Hypothetical protein PH 89.1 0.88 3E-05 41.7 7.4 19 30-48 126-144 (278)
214 2o07_A Spermidine synthase; st 89.0 1.4 4.6E-05 41.2 8.7 20 28-47 94-113 (304)
215 4dmg_A Putative uncharacterize 88.3 3.4 0.00011 40.1 11.3 29 170-198 299-327 (393)
216 3v97_A Ribosomal RNA large sub 86.3 5.5 0.00019 41.6 12.2 29 172-200 632-660 (703)
217 3m4x_A NOL1/NOP2/SUN family pr 85.1 0.73 2.5E-05 45.9 4.6 28 173-200 210-237 (456)
218 2f8l_A Hypothetical protein LM 82.6 2.3 7.7E-05 40.0 6.7 128 29-199 130-258 (344)
219 3frh_A 16S rRNA methylase; met 77.9 3.9 0.00013 37.6 6.3 62 12-78 90-162 (253)
220 3tqs_A Ribosomal RNA small sub 75.1 2.8 9.5E-05 38.2 4.6 51 30-84 30-92 (255)
221 3khk_A Type I restriction-modi 74.9 7.6 0.00026 39.3 8.2 139 29-198 244-396 (544)
222 2fhp_A Methylase, putative; al 68.9 3.9 0.00013 33.8 3.8 20 29-48 44-63 (187)
223 3kr9_A SAM-dependent methyltra 67.6 8.9 0.0003 34.3 6.0 21 29-49 15-35 (225)
224 2bm8_A Cephalosporin hydroxyla 67.0 3.2 0.00011 36.9 3.0 19 31-49 83-101 (236)
225 3lkd_A Type I restriction-modi 67.0 81 0.0028 31.7 13.7 131 29-199 221-360 (542)
226 3gnl_A Uncharacterized protein 65.6 10 0.00034 34.5 6.1 21 29-49 21-41 (244)
227 1g8a_A Fibrillarin-like PRE-rR 63.8 3.4 0.00012 35.8 2.5 21 29-49 73-93 (227)
228 3lec_A NADB-rossmann superfami 63.0 12 0.00042 33.6 6.0 21 29-49 21-41 (230)
229 3dou_A Ribosomal RNA large sub 61.3 6 0.0002 33.9 3.5 21 29-49 25-45 (191)
230 2oxt_A Nucleoside-2'-O-methylt 61.3 5.2 0.00018 36.5 3.3 22 29-50 74-95 (265)
231 1wy7_A Hypothetical protein PH 60.8 6.9 0.00024 33.1 3.9 19 29-47 49-67 (207)
232 2fpo_A Methylase YHHF; structu 59.7 3.3 0.00011 35.6 1.6 19 30-48 55-73 (202)
233 3fut_A Dimethyladenosine trans 59.3 13 0.00044 34.1 5.6 46 32-82 49-106 (271)
234 3s1s_A Restriction endonucleas 59.0 45 0.0015 35.7 10.3 24 176-199 444-467 (878)
235 1ne2_A Hypothetical protein TA 58.9 6.5 0.00022 33.2 3.3 17 126-142 109-125 (200)
236 3uzu_A Ribosomal RNA small sub 58.3 8.1 0.00028 35.6 4.1 49 30-84 43-107 (279)
237 2wa2_A Non-structural protein 57.9 8.1 0.00028 35.4 4.0 22 29-50 82-103 (276)
238 1zq9_A Probable dimethyladenos 57.5 21 0.00072 32.5 6.8 21 29-49 28-48 (285)
239 2p41_A Type II methyltransfera 57.3 6.2 0.00021 36.8 3.1 22 29-50 82-103 (305)
240 2p41_A Type II methyltransfera 55.9 12 0.0004 34.8 4.8 21 179-199 173-193 (305)
241 1yub_A Ermam, rRNA methyltrans 55.0 6.6 0.00022 34.8 2.8 21 29-49 29-49 (245)
242 1qam_A ERMC' methyltransferase 54.8 8.8 0.0003 34.2 3.6 21 29-49 30-50 (244)
243 2qm3_A Predicted methyltransfe 54.2 73 0.0025 29.9 10.3 105 30-199 173-280 (373)
244 2vdv_E TRNA (guanine-N(7)-)-me 54.0 6.3 0.00021 34.8 2.5 20 29-48 49-68 (246)
245 1qyr_A KSGA, high level kasuga 53.0 8.9 0.0003 34.6 3.3 54 30-85 22-85 (252)
246 2zig_A TTHA0409, putative modi 50.8 26 0.00087 32.1 6.2 65 121-198 34-98 (297)
247 2h1r_A Dimethyladenosine trans 50.1 18 0.00061 33.3 5.0 20 30-49 43-62 (299)
248 3r3h_A O-methyltransferase, SA 49.2 6.3 0.00022 35.0 1.7 20 30-49 61-80 (242)
249 3a27_A TYW2, uncharacterized p 48.5 8.4 0.00029 34.9 2.4 21 29-49 119-139 (272)
250 1nv8_A HEMK protein; class I a 48.3 7.3 0.00025 35.6 2.0 19 30-48 124-142 (284)
251 3c3y_A Pfomt, O-methyltransfer 48.0 21 0.00073 31.3 5.0 21 29-49 70-90 (237)
252 4azs_A Methyltransferase WBDD; 47.9 7.2 0.00025 39.4 2.1 22 28-49 65-86 (569)
253 3gru_A Dimethyladenosine trans 47.4 26 0.00088 32.5 5.7 21 30-50 51-71 (295)
254 3p8z_A Mtase, non-structural p 46.7 13 0.00046 34.1 3.4 34 11-47 63-96 (267)
255 3evf_A RNA-directed RNA polyme 44.7 15 0.00052 34.0 3.5 20 30-49 75-94 (277)
256 3ftd_A Dimethyladenosine trans 44.0 6 0.0002 35.7 0.6 52 30-83 32-92 (249)
257 2ih2_A Modification methylase 43.7 20 0.00069 33.9 4.4 24 176-199 143-166 (421)
258 3lkz_A Non-structural protein 43.5 13 0.00046 35.0 2.9 33 11-46 79-111 (321)
259 2qy6_A UPF0209 protein YFCK; s 43.4 11 0.00038 34.2 2.4 24 28-51 59-82 (257)
260 3c3p_A Methyltransferase; NP_9 42.9 5.9 0.0002 33.8 0.4 19 30-48 57-75 (210)
261 2wa2_A Non-structural protein 42.6 39 0.0013 30.7 6.0 50 123-199 144-195 (276)
262 3ua3_A Protein arginine N-meth 42.1 22 0.00075 37.5 4.6 45 107-159 496-542 (745)
263 1m6y_A S-adenosyl-methyltransf 40.2 15 0.00051 34.2 2.8 34 14-50 14-47 (301)
264 3gcz_A Polyprotein; flavivirus 40.2 11 0.00036 35.2 1.7 20 30-49 91-110 (282)
265 4gqb_A Protein arginine N-meth 40.0 23 0.00079 36.6 4.4 23 28-50 356-378 (637)
266 2oxt_A Nucleoside-2'-O-methylt 39.8 48 0.0016 29.9 6.1 21 179-199 165-187 (265)
267 3k6r_A Putative transferase PH 39.7 15 0.0005 33.9 2.6 19 30-48 126-144 (278)
268 2k4m_A TR8_protein, UPF0146 pr 38.9 17 0.00058 30.8 2.6 32 16-47 22-54 (153)
269 3ll7_A Putative methyltransfer 37.3 26 0.00089 34.2 4.1 46 30-77 94-153 (410)
270 3eld_A Methyltransferase; flav 37.3 21 0.00071 33.5 3.2 22 28-49 80-101 (300)
271 1sui_A Caffeoyl-COA O-methyltr 36.9 10 0.00036 33.7 1.1 21 29-49 79-99 (247)
272 1uwv_A 23S rRNA (uracil-5-)-me 36.6 27 0.00092 33.8 4.1 19 30-48 287-305 (433)
273 3cbg_A O-methyltransferase; cy 36.4 12 0.0004 32.8 1.3 19 30-48 73-91 (232)
274 3ol0_A De novo designed monome 34.7 23 0.0008 24.0 2.3 25 107-131 6-30 (48)
275 2r6z_A UPF0341 protein in RSP 33.3 13 0.00043 33.7 1.0 19 31-49 85-103 (258)
276 3tm4_A TRNA (guanine N2-)-meth 32.9 20 0.0007 33.9 2.5 20 29-48 217-236 (373)
277 2b9e_A NOL1/NOP2/SUN domain fa 32.9 56 0.0019 30.2 5.5 21 30-50 103-123 (309)
278 4auk_A Ribosomal RNA large sub 32.6 20 0.00069 34.6 2.4 92 9-139 186-282 (375)
279 3qua_A Putative uncharacterize 32.1 26 0.00091 30.7 2.9 41 213-256 158-198 (199)
280 1wek_A Hypothetical protein TT 31.0 59 0.002 28.7 5.0 41 213-256 172-212 (217)
281 2yx1_A Hypothetical protein MJ 30.1 51 0.0018 30.6 4.7 17 30-46 196-212 (336)
282 3c0k_A UPF0064 protein YCCW; P 29.5 23 0.00079 33.7 2.2 25 174-198 316-340 (396)
283 1b0z_A Protein (phosphoglucose 29.0 29 0.001 34.2 2.9 117 43-168 17-150 (445)
284 2a33_A Hypothetical protein; s 26.7 42 0.0014 29.7 3.3 41 213-256 150-190 (215)
285 2jjq_A Uncharacterized RNA met 26.5 25 0.00085 34.3 1.8 19 30-48 291-309 (425)
286 2px2_A Genome polyprotein [con 26.3 20 0.00067 33.2 1.0 22 28-49 72-93 (269)
287 1q1h_A TFE, transcription fact 24.8 33 0.0011 26.1 2.0 42 215-256 48-93 (110)
288 1t35_A Hypothetical protein YV 24.1 49 0.0017 28.6 3.1 41 213-256 138-178 (191)
289 1nvp_D Transcription initiatio 22.5 48 0.0016 26.3 2.5 53 215-269 12-65 (108)
290 3ldu_A Putative methylase; str 22.3 52 0.0018 31.4 3.2 37 12-50 180-216 (385)
291 1ydh_A AT5G11950; structural g 22.3 66 0.0022 28.4 3.6 41 213-256 146-186 (216)
292 2cmg_A Spermidine synthase; tr 22.2 31 0.0011 31.1 1.5 19 179-197 153-171 (262)
293 3sbx_A Putative uncharacterize 22.2 50 0.0017 28.6 2.8 40 213-255 149-188 (189)
294 1pp9_D Cytochrome C-1, cytochr 22.1 62 0.0021 29.3 3.4 51 114-184 144-194 (241)
295 3m21_A Probable tautomerase HP 22.0 1.2E+02 0.004 20.9 4.3 41 42-82 13-54 (67)
296 1d0q_A DNA primase; zinc-bindi 22.0 72 0.0025 24.5 3.4 29 35-63 61-94 (103)
297 2v1n_A KIN17, protein KIN homo 21.6 46 0.0016 26.6 2.2 26 161-186 12-37 (111)
298 1u9d_A Hypothetical protein VC 21.6 48 0.0016 26.8 2.4 38 44-81 78-115 (122)
299 3ej9_B Beta-subunit of trans-3 21.5 47 0.0016 24.3 2.0 35 46-83 18-52 (70)
300 2lmc_A Bacterial RNA polymeras 20.9 52 0.0018 24.6 2.2 31 235-266 44-78 (84)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=2e-97 Score=728.24 Aligned_cols=334 Identities=63% Similarity=1.086 Sum_probs=312.3
Q ss_pred chHHHHHHHhHHHHHHHHHhhcccC-CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceEEEeCCCCCC
Q 018892 2 FVQEKVISIAKPITEEAMTKLFCST-SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGS-QLPEFQVFLNDLPGN 79 (349)
Q Consensus 2 ~~Q~~~~~~~~~~l~~ai~~~~~~~-~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~-~~p~~~v~~nDlP~N 79 (349)
.+|++++..++|++++||.+++... .+++++|||||||+|+||+.+++.||++|+++|++.++ ++|+|||||||||+|
T Consensus 23 ~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~N 102 (359)
T 1m6e_X 23 FIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGN 102 (359)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCch
Confidence 3799999999999999999998765 68899999999999999999999999999999987776 688999999999999
Q ss_pred chHHHHHhhHhhHHHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCC
Q 018892 80 DFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 159 (349)
Q Consensus 80 DFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~s 159 (349)
|||+||++|+.++ + .+ ++||++|||||||+||||++|+|+|||++||||||++|+.+.+|||+||++++
T Consensus 103 DFntlF~~L~~~~----~---~~----~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~ 171 (359)
T 1m6e_X 103 DFNAIFRSLPIEN----D---VD----GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANT 171 (359)
T ss_dssp CHHHHHTTTTTSC----S---CT----TCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSS
T ss_pred HHHHHHHhcchhc----c---cC----CCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCC
Confidence 9999999999863 1 11 57999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCC
Q 018892 160 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFN 239 (349)
Q Consensus 160 s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn 239 (349)
+|++|.+||++||++||.+||++|++||||||+||++++|+++.++++++++.+|++|.++|++||.||+|++|++|+||
T Consensus 172 ~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~ 251 (359)
T 1m6e_X 172 CPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFN 251 (359)
T ss_dssp SCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccC
Confidence 99999999999999999999999999999999999999999999898888888999999999999999999999999999
Q ss_pred cCcccCCHHHHHHHHhhCCceEEEEEEEEeecccccccCcccccccccccccchhhhHHHHHhhhhHHHHhhchhHHHHH
Q 018892 240 IPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDEL 319 (349)
Q Consensus 240 ~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~~hfg~~i~del 319 (349)
+|+|+||++|++++|+++|+|+|+++|+++++|++++++ +|...+....|+.+++++||++||+|.+|||++|+|+|
T Consensus 252 ~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~---~d~~~~~~~~g~~~a~~~Ra~~e~ll~~hfG~~i~d~l 328 (359)
T 1m6e_X 252 IPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKD---GDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDV 328 (359)
T ss_dssp CCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSC---TTCCSSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccch---hhhhhhhhHhHhHhhhhhhhhcchhhHHhccHHHHHHH
Confidence 999999999999999999999999999999999887553 23222345788999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCCceEEEEEEEEecC
Q 018892 320 FKRYREIVADRMSKEKTKFINVTVSLTKIG 349 (349)
Q Consensus 320 F~r~~~~v~~~~~~~~~~~~~~~~~l~r~~ 349 (349)
|+||+++++++++..++++++++++|+||.
T Consensus 329 f~ry~~~~~~~~~~~~~~~~~~~~~L~k~~ 358 (359)
T 1m6e_X 329 FHRYKLLIIERMSKEKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEEEEEEBCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEEEEEeCC
Confidence 999999999999999999999999999984
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=2e-94 Score=712.27 Aligned_cols=337 Identities=39% Similarity=0.688 Sum_probs=299.5
Q ss_pred HHHHHHHhHHHHHHHHHhhcccCCCC---ceEEEeecCCCCcccHHHHHHHHHHHHHHHHh--cCCCCCceEEEeCCCCC
Q 018892 4 QEKVISIAKPITEEAMTKLFCSTSPT---KVAIADLGCSSGPNTLLVASELIKVVNKICDK--LGSQLPEFQVFLNDLPG 78 (349)
Q Consensus 4 Q~~~~~~~~~~l~~ai~~~~~~~~~~---~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~--~~~~~p~~~v~~nDlP~ 78 (349)
|++++..++|++++||.+++....++ +++|||||||+|+||+.+++.||++|+++|++ .++++|+|||||||||+
T Consensus 24 Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~ 103 (384)
T 2efj_A 24 YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQ 103 (384)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCc
Confidence 99999999999999999998755555 99999999999999999999999999999865 55568899999999999
Q ss_pred CchHHHHHhhHhhHHHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCC------CCc
Q 018892 79 NDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------NKG 152 (349)
Q Consensus 79 NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~------n~~ 152 (349)
||||+||++||.+++++.++.|.++ ++||++|||||||+||||++|+|+|||++||||||++|+.+.+ |||
T Consensus 104 NDFN~lF~~L~~~~~~~~~~~g~~~---~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg 180 (384)
T 2efj_A 104 NDFNSVFKLLPSFYRNLEKENGRKI---GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKG 180 (384)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCCT---TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTT
T ss_pred cchHHHHhhhhhhHhhhhhhccCCC---CceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCC
Confidence 9999999999999999877777666 7899999999999999999999999999999999999999887 999
Q ss_pred eeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCC--CCCChhhhHHHHHHHHHHHHHHhcCCc
Q 018892 153 NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ--DPSSKECCYIWELLATALNNMVSEGLI 230 (349)
Q Consensus 153 ~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~--~~~~~~~~~~~~~l~~al~~mv~eG~i 230 (349)
+||+++++|++|.+||++||++||.+||++|++||||||+||++++|+++. ++.++ +.+.++|++||.||+|
T Consensus 181 ~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~------~~l~~al~~lv~eGli 254 (384)
T 2efj_A 181 CIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSM------DLLEMSINDLVIEGHL 254 (384)
T ss_dssp CSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHH------HHHHHHHHHHHHHTSS
T ss_pred ceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccH------HHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999997 76644 3899999999999999
Q ss_pred chhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEeeccccc---ccCcc-cccccc--cccccchhhhHHHHHhhh
Q 018892 231 EEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAY---QNGFK-FNEAVD--AFNDGGYNVANCMRAVAE 304 (349)
Q Consensus 231 ~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~~w~~~---~~~~~-~~d~~~--~~~~~~~~~a~~iRA~~e 304 (349)
+++++|+||+|+|+||.+|++++|+++|+|+|+++|+++.+|+++ ++... .+|... +....|+.+++++||++|
T Consensus 255 ~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iRa~~e 334 (384)
T 2efj_A 255 EEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYE 334 (384)
T ss_dssp CHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhHhHHHhhhhhHHhhh
Confidence 999999999999999999999999999999999999999999876 33100 011000 134678999999999999
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHhhhhhcCCceEEEEEEEEecC
Q 018892 305 PLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLTKIG 349 (349)
Q Consensus 305 p~l~~hfg~~i~delF~r~~~~v~~~~~~~~~~~~~~~~~l~r~~ 349 (349)
|+|.+|||++|+|+||+||+++++++++..++++++++++|+||+
T Consensus 335 pll~~hfG~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~~ 379 (384)
T 2efj_A 335 PILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKKP 379 (384)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEECC
T ss_pred hhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEcc
Confidence 999999999999999999999999999999999999999999985
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=4.1e-91 Score=687.40 Aligned_cols=335 Identities=35% Similarity=0.576 Sum_probs=300.6
Q ss_pred chHHHHHHHhHHHHHHHHHhhcccC--CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCC
Q 018892 2 FVQEKVISIAKPITEEAMTKLFCST--SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 79 (349)
Q Consensus 2 ~~Q~~~~~~~~~~l~~ai~~~~~~~--~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~N 79 (349)
.+|++++..++|++++||.+++... .+++++|||||||+|+||+.+++.||++|+++|++.+.++|+|||+|||||+|
T Consensus 23 ~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 23 LAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp ---CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 3699999999999999999987654 47799999999999999999999999999999988888889999999999999
Q ss_pred chHHHHHhhHhhHHHHHH---hhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCC------C
Q 018892 80 DFNTIFRSLASFQKILRK---QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------N 150 (349)
Q Consensus 80 DFn~LF~~l~~~~~~~~~---~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~------n 150 (349)
|||+||++|+.+++++.+ ..+... ++||++|||||||+||||++|+|+|||++||||||++|+.+.+ |
T Consensus 103 DFn~lF~~L~~~~~~~~~~~~~~~~~~---~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~n 179 (374)
T 3b5i_A 103 DFNTLFQLLPPLVSNTCMEECLAADGN---RSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYN 179 (374)
T ss_dssp CHHHHHHHSCCBCCCC--CCC---CCC---BCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCC
T ss_pred chHHHHhhhhhhhhhcchhhhccccCC---CceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhcccccccc
Confidence 999999999987543211 112222 6799999999999999999999999999999999999998876 9
Q ss_pred CceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCCCC-hhhhHHH-HHHHHHHHHHHhcC
Q 018892 151 KGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSS-KECCYIW-ELLATALNNMVSEG 228 (349)
Q Consensus 151 ~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~-~~~~~~~-~~l~~al~~mv~eG 228 (349)
||+||+++++|+ |.+||++||++||..||++|++||||||+||++++|+++.++++ ++++.+| ++|.++|++|+.||
T Consensus 180 kg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG 258 (374)
T 3b5i_A 180 RGRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREG 258 (374)
T ss_dssp TTTSSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSS
T ss_pred CCceEeCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhC
Confidence 999999999988 99999999999999999999999999999999999999988877 4667789 99999999999999
Q ss_pred CcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEeecccccccCcccccccccccccchhhhHHHHHhhhhHHH
Q 018892 229 LIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLV 308 (349)
Q Consensus 229 ~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~ 308 (349)
+|+++++|+||+|+|+||.+|++++|+++|+|+|+++|+++++|+++.+.. .| ....|+.+++++||++||+|.
T Consensus 259 ~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~--~~----~~~~g~~~a~~~Ra~~e~ll~ 332 (374)
T 3b5i_A 259 LVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEP--DD----ASEVGRAFASSCRSVAGVLVE 332 (374)
T ss_dssp SSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSST--TC----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCcccccc--ch----hHHHHHHHHHHHHHhccchhH
Confidence 999999999999999999999999999888899999999999998764431 22 356789999999999999999
Q ss_pred HhhchhHHHHHHHHHHHHHHhhhh--hcCCc--eEEEEEEEE
Q 018892 309 SQFGEAIIDELFKRYREIVADRMS--KEKTK--FINVTVSLT 346 (349)
Q Consensus 309 ~hfg~~i~delF~r~~~~v~~~~~--~~~~~--~~~~~~~l~ 346 (349)
+|||++|+|+||+||+++++++++ .++.+ +++++++|+
T Consensus 333 ~hfg~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 333 AHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred hhccHHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 999999999999999999999988 66777 788888885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=4.7e-10 Score=104.10 Aligned_cols=203 Identities=22% Similarity=0.317 Sum_probs=128.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.. +..+|+..|+-.. . + +...... . +-
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~~-----~--~----~~a~~~~-~-----~~ 102 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-----------------SGAEVLGTDNAAT-----M--I----EKARQNY-P-----HL 102 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-----------------TTCEEEEEESCHH-----H--H----HHHHHHC-T-----TS
T ss_pred CCCEEEEecCCCCHHHHHHHh-----------------CCCeEEEEECCHH-----H--H----HHHHhhC-C-----CC
Confidence 456999999999998775532 1246777775211 0 1 0111111 1 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
-|.. +++.. +-+++++|+++|+.++||+.. | ..+|+.=++-|+
T Consensus 103 ~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~d-~--------------------------------~~~l~~~~~~Lk 145 (279)
T 3ccf_A 103 HFDV---ADARN-FRVDKPLDAVFSNAMLHWVKE-P--------------------------------EAAIASIHQALK 145 (279)
T ss_dssp CEEE---CCTTT-CCCSSCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHEE
T ss_pred EEEE---CChhh-CCcCCCcCEEEEcchhhhCcC-H--------------------------------HHHHHHHHHhcC
Confidence 2322 23322 223689999999999999752 1 134445567899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++...+..+. ..+.+.+...+... |.- ......|+++++.++++..+++.| |++.+.+.+
T Consensus 146 pgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 210 (279)
T 3ccf_A 146 SGGRFVAEFGGKGNI-------KYILEALYNALETL---GIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALF 210 (279)
T ss_dssp EEEEEEEEEECTTTT-------HHHHHHHHHHHHHH---TCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEE
T ss_pred CCcEEEEEecCCcch-------HHHHHHHHHHHHhc---CCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEe
Confidence 999999998765431 12334444444433 321 223456788999999999999999 999988877
Q ss_pred eecccccccCcccccccccccccchhhhHHHHHhhhhHHHHhhchhHHHHHHHHHHHHHHhhhh
Q 018892 269 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMS 332 (349)
Q Consensus 269 ~~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~~hfg~~i~delF~r~~~~v~~~~~ 332 (349)
..++.. ......+..|++++..+++.. ++++..+++.+++.+.+.+...
T Consensus 211 ~~~~~~--------------~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 259 (279)
T 3ccf_A 211 NRPTTL--------------AEGEFGMANWIQMFASAFLVG-LTPDQQVQLIRKVEATLQDKLY 259 (279)
T ss_dssp ECCEEC--------------SSGGGHHHHHHHHHCHHHHTT-CCHHHHHHHHHHHHHHHHHHHE
T ss_pred cccccc--------------cCCHHHHHHHHHHhhHHHhcc-CCHHHHHHHHHHHHHHHHhhcc
Confidence 655431 112346677888777666653 7778888888888888776543
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.17 E-value=2.4e-09 Score=97.35 Aligned_cols=204 Identities=14% Similarity=0.156 Sum_probs=118.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... . |..+|+..|+-.+- + +.... ... +-
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--------~-------~~~~v~~~D~s~~~-------~----~~a~~-~~~-----~~ 80 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDR--------Y-------GVNVITGIDSDDDM-------L----EKAAD-RLP-----NT 80 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHH--------H-------CTTSEEEEESCHHH-------H----HHHHH-HST-----TS
T ss_pred CCCEEEEecCcCCHHHHHHHHh--------C-------CCCEEEEEECCHHH-------H----HHHHH-hCC-----Cc
Confidence 4568999999999987755432 1 22456666643210 1 11111 111 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
-|. .+.+..-. |++++|+++|+.++||+.. ...+|+.-.+-|+
T Consensus 81 ~~~---~~d~~~~~-~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L~ 123 (259)
T 2p35_A 81 NFG---KADLATWK-PAQKADLLYANAVFQWVPD---------------------------------HLAVLSQLMDQLE 123 (259)
T ss_dssp EEE---ECCTTTCC-CSSCEEEEEEESCGGGSTT---------------------------------HHHHHHHHGGGEE
T ss_pred EEE---ECChhhcC-ccCCcCEEEEeCchhhCCC---------------------------------HHHHHHHHHHhcC
Confidence 232 23444323 7899999999999999742 1235556678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++...+.... .. ...+.++...+............+..+++.+++++.+++.| |+++..+..
T Consensus 124 pgG~l~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 190 (259)
T 2p35_A 124 SGGVLAVQMPDNLQE--------PT----HIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTV 190 (259)
T ss_dssp EEEEEEEEEECCTTS--------HH----HHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGE-EEEEEEEEE
T ss_pred CCeEEEEEeCCCCCc--------HH----HHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcC-CceEEEEEE
Confidence 999999998654321 11 12222232222111111111123567789999999999999 887655532
Q ss_pred e-ecccccccCcccccccccccccchhhhHHHHHhh-hhHHHHhhchhHHHHHHHHHHHHHHhhhh
Q 018892 269 E-VNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVA-EPLLVSQFGEAIIDELFKRYREIVADRMS 332 (349)
Q Consensus 269 ~-~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~-ep~l~~hfg~~i~delF~r~~~~v~~~~~ 332 (349)
. .++ .....+..|+++.. .+++ ..++++..+++.+++.+.+++.+.
T Consensus 191 ~~~~~-----------------~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 191 YNHPM-----------------KDADSIVEWVKGTGLRPYL-AAAGEENREAFLADYTRRIAAAYP 238 (259)
T ss_dssp EEEEE-----------------SCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHHHHHHHHHHHHSC
T ss_pred eeecc-----------------CCchHHhhhhhcCcchHHH-HhCCHHHHHHHHHHHHHHHHHhCC
Confidence 1 111 12345677777654 3444 457888888898899888887654
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.07 E-value=5.7e-09 Score=94.91 Aligned_cols=223 Identities=12% Similarity=0.133 Sum_probs=131.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+..-+|.|+||++|..+..+... ..+|+..|.-.+- + +.......... .
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~~~-------~----~~a~~~~~~~~---~ 86 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-----------------GYRYIALDADAAM-------L----EVFRQKIAGVD---R 86 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-----------------TCEEEEEESCHHH-------H----HHHHHHTTTSC---T
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-----------------CCEEEEEECCHHH-------H----HHHHHHhhccC---C
Confidence 34579999999999998755421 1356666642110 0 01111110000 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.+++..--+|++++|+++++.++||+.. | ..+|+.=.+-|
T Consensus 87 ~~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L 131 (263)
T 2yqz_A 87 KV--QVVQADARAIPLPDESVHGVIVVHLWHLVPD-W--------------------------------PKVLAEAIRVL 131 (263)
T ss_dssp TE--EEEESCTTSCCSCTTCEEEEEEESCGGGCTT-H--------------------------------HHHHHHHHHHE
T ss_pred ce--EEEEcccccCCCCCCCeeEEEECCchhhcCC-H--------------------------------HHHHHHHHHHC
Confidence 22 2233455444478999999999999999752 1 23444456789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.+...+. +. .....+.+..++..+ |. . ...+.+..+.+++.+.+++.| |++...+.
T Consensus 132 ~pgG~l~~~~~~~~~----~~-~~~~~~~~~~~~~~~---~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 195 (263)
T 2yqz_A 132 KPGGALLEGWDQAEA----SP-EWTLQERWRAFAAEE---GF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREV 195 (263)
T ss_dssp EEEEEEEEEEEEECC----CH-HHHHHHHHHHHHHHH---TC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CCCcEEEEEecCCCc----cH-HHHHHHHHHHHHHHh---CC-C------cccccccCCHHHHHHHHHHcC-CCcceEEE
Confidence 999999998443311 10 001223333333322 31 1 122456778999999999999 99877655
Q ss_pred EeecccccccCcccccccccccccchhhhHHHHHhhhhHHHHhhchhHHHHHHHHHHHHHHhhhhhcC---CceEEEEEE
Q 018892 268 SEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEK---TKFINVTVS 344 (349)
Q Consensus 268 ~~~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~~hfg~~i~delF~r~~~~v~~~~~~~~---~~~~~~~~~ 344 (349)
.. |.. ....+.+..++++.+.+.+ .+++++..+++.+++.+.+.+...... .-+..++++
T Consensus 196 ~~--~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 258 (263)
T 2yqz_A 196 AR--WRE--------------ERTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLR 258 (263)
T ss_dssp EE--EEE--------------EECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEE
T ss_pred ee--eec--------------CCCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEE
Confidence 43 431 1224456677776555544 357788888888888888887754322 224567777
Q ss_pred EEecC
Q 018892 345 LTKIG 349 (349)
Q Consensus 345 l~r~~ 349 (349)
+.|||
T Consensus 259 ~~rkp 263 (263)
T 2yqz_A 259 VSRLG 263 (263)
T ss_dssp EEECC
T ss_pred eeecC
Confidence 77775
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.85 E-value=2.3e-07 Score=85.11 Aligned_cols=157 Identities=13% Similarity=0.050 Sum_probs=93.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.+. . ..+|+.-|+-.. . +......... .|.. .+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~-----------~-----~~~v~gvD~s~~-----~--~~~a~~~~~~-~~~~----~~ 112 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATA-----------R-----DVRVTGISISRP-----Q--VNQANARATA-AGLA----NR 112 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH-----------S-----CCEEEEEESCHH-----H--HHHHHHHHHH-TTCT----TT
T ss_pred CCCEEEEeCCCCCHHHHHHHHh-----------c-----CCEEEEEeCCHH-----H--HHHHHHHHHh-cCCC----cc
Confidence 4579999999999987765431 1 145666664211 1 1111111111 1110 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+.+++..--+|++++|+++|+.++||+.. | ..+|+.-.+-|+
T Consensus 113 ~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~ 157 (273)
T 3bus_A 113 V--TFSYADAMDLPFEDASFDAVWALESLHHMPD-R--------------------------------GRALREMARVLR 157 (273)
T ss_dssp E--EEEECCTTSCCSCTTCEEEEEEESCTTTSSC-H--------------------------------HHHHHHHHTTEE
T ss_pred e--EEEECccccCCCCCCCccEEEEechhhhCCC-H--------------------------------HHHHHHHHHHcC
Confidence 2 2244566655578899999999999999742 1 235556678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++......... ... ....+..+. ..+. ..+.++.+++++.+++.| |++.+.+.+
T Consensus 158 pgG~l~i~~~~~~~~~--~~~-------~~~~~~~~~----------~~~~-~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 216 (273)
T 3bus_A 158 PGGTVAIADFVLLAPV--EGA-------KKEAVDAFR----------AGGG-VLSLGGIDEYESDVRQAE-LVVTSTVDI 216 (273)
T ss_dssp EEEEEEEEEEEESSCC--CHH-------HHHHHHHHH----------HHHT-CCCCCCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred CCeEEEEEEeeccCCC--Chh-------HHHHHHHHH----------hhcC-ccCCCCHHHHHHHHHHcC-CeEEEEEEC
Confidence 9999999887665321 110 111111111 0011 235789999999999999 999877765
Q ss_pred e
Q 018892 269 E 269 (349)
Q Consensus 269 ~ 269 (349)
.
T Consensus 217 ~ 217 (273)
T 3bus_A 217 S 217 (273)
T ss_dssp H
T ss_pred c
Confidence 3
No 8
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.83 E-value=5.4e-07 Score=84.35 Aligned_cols=226 Identities=13% Similarity=0.151 Sum_probs=123.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.... + .+|+.-|+-.+ .+....+.... .|- ..+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~---------------~-~~v~gvD~s~~-------~~~~a~~~~~~-~~~----~~~ 123 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY---------------D-VNVIGLTLSEN-------QYAHDKAMFDE-VDS----PRR 123 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEECCHH-------HHHHHHHHHHH-SCC----SSC
T ss_pred CcCEEEEeeccCcHHHHHHHHhC---------------C-CEEEEEECCHH-------HHHHHHHHHHh-cCC----CCc
Confidence 45699999999999887654321 1 45666664211 01111111111 121 112
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+-+.+- .+ ++++|+++|+.++|++.. |+.... .+++..+|+.=.+-|+
T Consensus 124 v~--~~~~d~~-~~--~~~fD~v~~~~~~~~~~d-~~~~~~-----------------------~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 124 KE--VRIQGWE-EF--DEPVDRIVSLGAFEHFAD-GAGDAG-----------------------FERYDTFFKKFYNLTP 174 (302)
T ss_dssp EE--EEECCGG-GC--CCCCSEEEEESCGGGTTC-CSSCCC-----------------------TTHHHHHHHHHHHSSC
T ss_pred eE--EEECCHH-Hc--CCCccEEEEcchHHhcCc-cccccc-----------------------hhHHHHHHHHHHHhcC
Confidence 21 1223332 23 789999999999999874 432210 1356677777788999
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~-y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
|||++++......+.... ......+..-...+.+.. .....|. +.|+.+|+.+.+++.| |++..++.
T Consensus 175 pgG~l~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~~ 242 (302)
T 3hem_A 175 DDGRMLLHTITIPDKEEA-QELGLTSPMSLLRFIKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVERYHR 242 (302)
T ss_dssp TTCEEEEEEEECCCHHHH-HHHTCCCCHHHHHHHHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEE
T ss_pred CCcEEEEEEEeccCccch-hhccccccccccchHHHH----------HHhcCCCCCCCCHHHHHHHHHhCC-cEEEEEEe
Confidence 999999998776542000 000000000000011111 1223343 6799999999999998 99988865
Q ss_pred EeecccccccCcccccccccccccchhhhHHHHHhhh--hHHHHhhchhHHHHHHHHHHHHHHhhhhhcCCceEEEEE
Q 018892 268 SEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAE--PLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTV 343 (349)
Q Consensus 268 ~~~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~e--p~l~~hfg~~i~delF~r~~~~v~~~~~~~~~~~~~~~~ 343 (349)
+.. .+++.+..|.+.+-. +-+.+.+|++..+ .++.|-.-.+.-+.........+++
T Consensus 243 ~~~-------------------~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~~ 300 (302)
T 3hem_A 243 IGA-------------------NYVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDLFRDKYTDVCQFTL 300 (302)
T ss_dssp CGG-------------------GHHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred Cch-------------------hHHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHHHhCCCCeEEEEEE
Confidence 421 233444444444332 2233446665544 4666666666666666666666554
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.81 E-value=1.4e-07 Score=84.61 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=109.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++..+|.|+||++|..+..+.+. .|..+|+.-|+-..= + +....... .. .
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~s~~~-------~----~~a~~~~~-~~---~ 92 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEK---------------YPEATFTLVDMSEKM-------L----EIAKNRFR-GN---L 92 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHH---------------CTTCEEEEEESCHHH-------H----HHHHHHTC-SC---T
T ss_pred CCCCeEEEecCCCCHHHHHHHHh---------------CCCCeEEEEECCHHH-------H----HHHHHhhc-cC---C
Confidence 45689999999999887654432 134677777753210 1 11111111 11 1
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+.+.+..-.++ +++|+++++.++||++. | +...+|+.=.+-|
T Consensus 93 ~--~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~-~------------------------------~~~~~l~~~~~~L 138 (234)
T 3dtn_A 93 K--VKYIEADYSKYDFE-EKYDMVVSALSIHHLED-E------------------------------DKKELYKRSYSIL 138 (234)
T ss_dssp T--EEEEESCTTTCCCC-SCEEEEEEESCGGGSCH-H------------------------------HHHHHHHHHHHHE
T ss_pred C--EEEEeCchhccCCC-CCceEEEEeCccccCCH-H------------------------------HHHHHHHHHHHhc
Confidence 2 22344666665556 89999999999999752 1 1234455556789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCC---cCcccCCHHHHHHHHhhCCceEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFN---IPQYTPSPAEIKSEVIKEGSFTIDH 264 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn---~P~y~~s~~E~~~~ie~~GsF~i~~ 264 (349)
+|||++++.....++. ..........|.....++-++.+++..+. --.+.++.+|+.+.++++| |++.+
T Consensus 139 kpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~ 210 (234)
T 3dtn_A 139 KESGIFINADLVHGET-------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVS 210 (234)
T ss_dssp EEEEEEEEEEECBCSS-------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEE
T ss_pred CCCcEEEEEEecCCCC-------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCcee
Confidence 9999999987665542 22345556677777777777776655321 2335579999999999999 99877
Q ss_pred EEEEeec
Q 018892 265 LEVSEVN 271 (349)
Q Consensus 265 ~e~~~~~ 271 (349)
......+
T Consensus 211 ~~~~~~~ 217 (234)
T 3dtn_A 211 CIYKYYQ 217 (234)
T ss_dssp EEEEETT
T ss_pred eeeeecc
Confidence 7655433
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.73 E-value=7.4e-07 Score=80.79 Aligned_cols=153 Identities=12% Similarity=0.100 Sum_probs=93.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
...-+|.|+||++|..+..+.... + .+|+.-|+-.+ ..+.... ..... .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-----------~-----~~v~~vD~s~~-----------~~~~a~~-~~~~~---~ 102 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-----------G-----AHTHGIDICSN-----------IVNMANE-RVSGN---N 102 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----------C-----CEEEEEESCHH-----------HHHHHHH-TCCSC---T
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-----------C-----CEEEEEeCCHH-----------HHHHHHH-HhhcC---C
Confidence 345799999999998877654321 1 35555564210 0011111 11100 1
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+-+++..--+|++++|+++++.++||++. .|...+|+.=.+-|
T Consensus 103 ~~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 149 (266)
T 3ujc_A 103 KI--IFEANDILTKEFPENNFDLIYSRDAILALSL-------------------------------ENKNKLFQKCYKWL 149 (266)
T ss_dssp TE--EEEECCTTTCCCCTTCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred Ce--EEEECccccCCCCCCcEEEEeHHHHHHhcCh-------------------------------HHHHHHHHHHHHHc
Confidence 22 1233455554578999999999999999731 24456666667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.........+.. ..+...+.. . ....++.++++..+++.| |++.+.+.
T Consensus 150 ~pgG~l~~~~~~~~~~~~~~-------~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~~~~~~ 205 (266)
T 3ujc_A 150 KPTGTLLITDYCATEKENWD-------DEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKNVVSKD 205 (266)
T ss_dssp EEEEEEEEEEEEESCGGGCC-------HHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCCCEEEEEEeccCCcccch-------HHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeEEEEEe
Confidence 99999999987665421111 112221111 1 124678999999999999 99877765
Q ss_pred E
Q 018892 268 S 268 (349)
Q Consensus 268 ~ 268 (349)
+
T Consensus 206 ~ 206 (266)
T 3ujc_A 206 L 206 (266)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.70 E-value=2.7e-06 Score=77.06 Aligned_cols=211 Identities=17% Similarity=0.125 Sum_probs=119.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+... + + -+|+.-|+-.. ..... ...... .|- .++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~------------~---~-~~v~~vD~s~~----~~~~a---~~~~~~-~~~----~~~ 97 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADY------------V---K-GQITGIDLFPD----FIEIF---NENAVK-ANC----ADR 97 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH------------C---C-SEEEEEESCHH----HHHHH---HHHHHH-TTC----TTT
T ss_pred CCCeEEEeCCCCCHHHHHHHHh------------C---C-CeEEEEECCHH----HHHHH---HHHHHH-cCC----CCc
Confidence 3469999999999987755421 1 2 26666664221 11111 111111 121 022
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+-+++..--+|++++|+++++.++||+. |. .+|+.=.+-|+
T Consensus 98 ~~--~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~--------------------------------~~l~~~~~~L~ 141 (257)
T 3f4k_A 98 VK--GITGSMDNLPFQNEELDLIWSEGAIYNIG--FE--------------------------------RGMNEWSKYLK 141 (257)
T ss_dssp EE--EEECCTTSCSSCTTCEEEEEEESCSCCCC--HH--------------------------------HHHHHHHTTEE
T ss_pred eE--EEECChhhCCCCCCCEEEEEecChHhhcC--HH--------------------------------HHHHHHHHHcC
Confidence 21 23345544347889999999999999972 21 23444467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++..+......+. ..+...|... .| ..++.+++...+++.| |++.....+
T Consensus 142 pgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~ 196 (257)
T 3f4k_A 142 KGGFIAVSEASWFTSERP--------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPTAHFIL 196 (257)
T ss_dssp EEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEEEEEEC
T ss_pred CCcEEEEEEeeccCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 999999998654332111 1122223221 02 1568999999999999 998876544
Q ss_pred e-ecccccccCcccccccccccccchhhhHHHHHhhhhHHHHhhchhHHHHHHHHHHHHHHhhhhhcCCceEEEEEEEEe
Q 018892 269 E-VNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLTK 347 (349)
Q Consensus 269 ~-~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~~hfg~~i~delF~r~~~~v~~~~~~~~~~~~~~~~~l~r 347 (349)
. ..|. ..+...++...+.+...+-++...+++.++..+..... ..+...+-..+++++|
T Consensus 197 ~~~~w~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~~k 256 (257)
T 3f4k_A 197 PENCWT-------------------EHYFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIGQK 256 (257)
T ss_dssp CGGGTC-------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEE
T ss_pred ChhhHH-------------------HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHhCCccceEEEEEec
Confidence 2 1242 11122333334444555556666666666666655533 4445556667777777
Q ss_pred c
Q 018892 348 I 348 (349)
Q Consensus 348 ~ 348 (349)
+
T Consensus 257 ~ 257 (257)
T 3f4k_A 257 R 257 (257)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.65 E-value=7.9e-07 Score=78.97 Aligned_cols=178 Identities=16% Similarity=0.113 Sum_probs=101.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCC-
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA- 106 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~- 106 (349)
+..-+|.|+||++|..++.+... ..+|+.-|.-.. . + ...+.. ....+..
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~~----~---~----~~a~~~-~~~~~~~~ 79 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-----------------GYSVTGIDINSE----A---I----RLAETA-ARSPGLNQ 79 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-----------------TCEEEEEESCHH----H---H----HHHHHH-TTCCSCCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-----------------CCeEEEEECCHH----H---H----HHHHHH-HHhcCCcc
Confidence 35679999999999887755432 135666664211 0 0 001111 0000000
Q ss_pred -CceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 107 -GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 107 -~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
..--+..+-+.+..--+|++++|+++++.++|++.. | .++..+|+.=.+
T Consensus 80 ~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~ 129 (235)
T 3sm3_A 80 KTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPD-P-----------------------------KERSRIIKEVFR 129 (235)
T ss_dssp SSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCC-H-----------------------------HHHHHHHHHHHH
T ss_pred ccCcceEEEEecccccCCCCCceeEEEEcchhhcCCC-H-----------------------------HHHHHHHHHHHH
Confidence 000223334455554578999999999999999763 1 122345666678
Q ss_pred hhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccC--CcCcccCCHHHHHHHHhhCCceEEE
Q 018892 186 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF--NIPQYTPSPAEIKSEVIKEGSFTID 263 (349)
Q Consensus 186 EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f--n~P~y~~s~~E~~~~ie~~GsF~i~ 263 (349)
-|+|||++++...+..... ..........+.....+|.......... ....++++.+|+++++++.| |++.
T Consensus 130 ~L~pgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~ 202 (235)
T 3sm3_A 130 VLKPGAYLYLVEFGQNWHL------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEID 202 (235)
T ss_dssp HEEEEEEEEEEEEBCCTTS------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEE
T ss_pred HcCCCeEEEEEECCcchhH------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEE
Confidence 8999999999987764321 1112222333333323332211111111 22346789999999999999 9999
Q ss_pred EEEEEeec
Q 018892 264 HLEVSEVN 271 (349)
Q Consensus 264 ~~e~~~~~ 271 (349)
+++....+
T Consensus 203 ~~~~~~~~ 210 (235)
T 3sm3_A 203 YFRVKELE 210 (235)
T ss_dssp EEEEEEEE
T ss_pred EEEeccee
Confidence 99876544
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.61 E-value=2.5e-06 Score=77.73 Aligned_cols=157 Identities=13% Similarity=0.156 Sum_probs=90.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.. . + + +|+..|+-.. .+....+.... .|. .+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~--------~----~---~--~v~gvD~s~~-------~l~~a~~~~~~-~~~-----~~ 86 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAP--------F----V---K--KVVAFDLTED-------ILKVARAFIEG-NGH-----QQ 86 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGG--------G----S---S--EEEEEESCHH-------HHHHHHHHHHH-TTC-----CS
T ss_pred CCCEEEEEeCCCCHHHHHHHH--------h----C---C--EEEEEeCCHH-------HHHHHHHHHHh-cCC-----Cc
Confidence 456999999999987664421 1 1 1 6666664211 11111111111 121 22
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+-+.+..--||++++|+++|+.++||+.. | ..+|+.=.+-|+
T Consensus 87 v--~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d-~--------------------------------~~~l~~~~r~Lk 131 (260)
T 1vl5_A 87 V--EYVQGDAEQMPFTDERFHIVTCRIAAHHFPN-P--------------------------------ASFVSEAYRVLK 131 (260)
T ss_dssp E--EEEECCC-CCCSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHEE
T ss_pred e--EEEEecHHhCCCCCCCEEEEEEhhhhHhcCC-H--------------------------------HHHHHHHHHHcC
Confidence 2 2234555554588999999999999999752 1 123444467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++.....++. .....+...+..+. + .......+.+++.+.+++.| |++..++..
T Consensus 132 pgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 190 (260)
T 1vl5_A 132 KGGQLLLVDNSAPEN--------DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FELEELHCF 190 (260)
T ss_dssp EEEEEEEEEEEBCSS--------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEEEEEEEE
T ss_pred CCCEEEEEEcCCCCC--------HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 999999986554332 11121222221111 1 01234568999999999999 999888776
Q ss_pred eec
Q 018892 269 EVN 271 (349)
Q Consensus 269 ~~~ 271 (349)
..+
T Consensus 191 ~~~ 193 (260)
T 1vl5_A 191 HKT 193 (260)
T ss_dssp EEE
T ss_pred ecc
Confidence 543
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.59 E-value=1e-06 Score=80.87 Aligned_cols=163 Identities=18% Similarity=0.219 Sum_probs=93.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+..-+|+|+||++|..+..+.. . .|..+|+.-|.-.+-.... ...... .+. .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~~~~~~a-------~~~~~~-~~~-----~ 87 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAK--------N-------NPDAEITSIDISPESLEKA-------RENTEK-NGI-----K 87 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHH--------H-------CTTSEEEEEESCHHHHHHH-------HHHHHH-TTC-----C
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHH-------HHHHHH-cCC-----C
Confidence 4567999999999987764432 1 1346777777532111111 111111 111 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+-+....-.+|++++|+++++.++||+.. | ..+|+.=.+-|
T Consensus 88 ~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L 132 (276)
T 3mgg_A 88 N--VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQS-P--------------------------------EEALKSLKKVL 132 (276)
T ss_dssp S--EEEEECCGGGCCSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHE
T ss_pred C--cEEEEcccccCCCCCCCeeEEEEechhhhcCC-H--------------------------------HHHHHHHHHHc
Confidence 2 22233556666688999999999999999753 1 12334445779
Q ss_pred ccCceEEEEecccCCC--CCCChhhhHHHHHHHHHHHHH-HhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEE
Q 018892 188 VAEGRMVLTFLGRKSQ--DPSSKECCYIWELLATALNNM-VSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 264 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~--~~~~~~~~~~~~~l~~al~~m-v~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~ 264 (349)
+|||.+++........ .+... ...... ..+..+ ...| ....+.+++...+++.| |++..
T Consensus 133 ~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~-------------~~~~~~~~l~~~l~~aG-f~~v~ 194 (276)
T 3mgg_A 133 KPGGTITVIEGDHGSCYFHPEGK---KAIEAW-NCLIRVQAYMK-------------GNSLVGRQIYPLLQESG-FEKIR 194 (276)
T ss_dssp EEEEEEEEEEECGGGCEEESCCH---HHHHHH-HHHHHHHHHTT-------------CCTTGGGGHHHHHHHTT-CEEEE
T ss_pred CCCcEEEEEEcCCCCceECCCcH---HHHHHH-HHHHHHHHhcC-------------CCcchHHHHHHHHHHCC-CCeEE
Confidence 9999999987654332 11111 111111 122222 1112 11235578999999999 99988
Q ss_pred EEEEeec
Q 018892 265 LEVSEVN 271 (349)
Q Consensus 265 ~e~~~~~ 271 (349)
++....+
T Consensus 195 ~~~~~~~ 201 (276)
T 3mgg_A 195 VEPRMVY 201 (276)
T ss_dssp EEEEEEE
T ss_pred EeeEEEE
Confidence 8876544
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.58 E-value=2.3e-07 Score=86.04 Aligned_cols=168 Identities=18% Similarity=0.274 Sum_probs=96.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++..+|.|+||++|..+..+... ..+|+.-|+-.. . +......... .|- ..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~gvD~s~~----~---~~~a~~~~~~-~~~----~~ 117 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-----------------GHQVILCDLSAQ----M---IDRAKQAAEA-KGV----SD 117 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-----------------TCEEEEEESCHH----H---HHHHHHHHHC--CC----GG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-----------------CCEEEEEECCHH----H---HHHHHHHHHh-cCC----Cc
Confidence 34679999999999887654332 145666664211 1 1111111111 110 01
Q ss_pred ceEEeecCCcccccc-cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 108 QCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 108 ~~f~~~vpgSFy~rl-fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
++ ..+-+++..-. ++++++|+++++.++||+.. | ..+|+.=.+-
T Consensus 118 ~v--~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~ 162 (285)
T 4htf_A 118 NM--QFIHCAAQDVASHLETPVDLILFHAVLEWVAD-P--------------------------------RSVLQTLWSV 162 (285)
T ss_dssp GE--EEEESCGGGTGGGCSSCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHT
T ss_pred ce--EEEEcCHHHhhhhcCCCceEEEECchhhcccC-H--------------------------------HHHHHHHHHH
Confidence 22 12334554444 68899999999999999742 1 1244555788
Q ss_pred hccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 187 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 187 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
|+|||++++........ .....+...|. ....+..... .....+.++.+.+|+++.+++.| |++.+.+
T Consensus 163 LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~ 230 (285)
T 4htf_A 163 LRPGGVLSLMFYNAHGL--------LMHNMVAGNFD-YVQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGKT 230 (285)
T ss_dssp EEEEEEEEEEEEBHHHH--------HHHHHHTTCHH-HHHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEE
T ss_pred cCCCeEEEEEEeCCchH--------HHHHHHhcCHH-HHhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeeee
Confidence 99999999998665421 01111111121 1222221111 11234567789999999999999 9999888
Q ss_pred EEeec
Q 018892 267 VSEVN 271 (349)
Q Consensus 267 ~~~~~ 271 (349)
.+...
T Consensus 231 ~~~~~ 235 (285)
T 4htf_A 231 GVRVF 235 (285)
T ss_dssp EESSS
T ss_pred eEEEe
Confidence 77544
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.58 E-value=6.5e-07 Score=79.27 Aligned_cols=162 Identities=14% Similarity=0.188 Sum_probs=98.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... ..+|+.-|.-.. . + +........ +-
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~~----~---~----~~a~~~~~~-----~~ 91 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-----------------GRTVYGIEPSRE----M---R----MIAKEKLPK-----EF 91 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-----------------TCEEEEECSCHH----H---H----HHHHHHSCT-----TC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-----------------CCeEEEEeCCHH----H---H----HHHHHhCCC-----ce
Confidence 3569999999999887655431 145666664221 0 1 111111110 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
-| +-+.+..--+| +++|+++++.++||+.. | +...+|+.=.+-|+
T Consensus 92 ~~---~~~d~~~~~~~-~~fD~v~~~~~l~~~~~-~------------------------------~~~~~l~~~~~~Lk 136 (220)
T 3hnr_A 92 SI---TEGDFLSFEVP-TSIDTIVSTYAFHHLTD-D------------------------------EKNVAIAKYSQLLN 136 (220)
T ss_dssp CE---ESCCSSSCCCC-SCCSEEEEESCGGGSCH-H------------------------------HHHHHHHHHHHHSC
T ss_pred EE---EeCChhhcCCC-CCeEEEEECcchhcCCh-H------------------------------HHHHHHHHHHHhcC
Confidence 12 34555554566 99999999999999753 1 11335555578899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++..+...+. ......+..+...|..... .-..+.++++.+|+++.+++.| |+|...+..
T Consensus 137 pgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 137 KGGKIVFADTIFADQ-----------DAYDKTVEAAKQRGFHQLA---NDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp TTCEEEEEEECBSSH-----------HHHHHHHHHHHHTTCHHHH---HHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred CCCEEEEEeccccCh-----------HHHHHHHHHHHhCCCccch---hhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 999999987554431 1223333344444543211 1122457789999999999999 999888766
Q ss_pred eeccc
Q 018892 269 EVNWN 273 (349)
Q Consensus 269 ~~~w~ 273 (349)
...|-
T Consensus 202 ~~~w~ 206 (220)
T 3hnr_A 202 HFVWV 206 (220)
T ss_dssp SSEEE
T ss_pred ceEEE
Confidence 54553
No 17
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.58 E-value=9.5e-06 Score=74.25 Aligned_cols=212 Identities=17% Similarity=0.139 Sum_probs=116.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+..-+|.|+||++|..++.+.. . +..+|+.-|+-.. .+......... .|- .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~---------------~-~~~~v~gvD~s~~-------~~~~a~~~~~~-~~~----~~ 96 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAG---------------H-VTGQVTGLDFLSG-------FIDIFNRNARQ-SGL----QN 96 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHT---------------T-CSSEEEEEESCHH-------HHHHHHHHHHH-TTC----TT
T ss_pred CCCCEEEEeCCCCCHHHHHHHh---------------c-cCCEEEEEeCCHH-------HHHHHHHHHHH-cCC----Cc
Confidence 3567999999999988765431 1 3357777775321 11111111111 121 02
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++- .+-+++..--+|++++|+++|+.++|++. | ..+|+.=.+-|
T Consensus 97 ~v~--~~~~d~~~~~~~~~~fD~i~~~~~~~~~~--~--------------------------------~~~l~~~~~~L 140 (267)
T 3kkz_A 97 RVT--GIVGSMDDLPFRNEELDLIWSEGAIYNIG--F--------------------------------ERGLNEWRKYL 140 (267)
T ss_dssp TEE--EEECCTTSCCCCTTCEEEEEESSCGGGTC--H--------------------------------HHHHHHHGGGE
T ss_pred CcE--EEEcChhhCCCCCCCEEEEEEcCCceecC--H--------------------------------HHHHHHHHHHc
Confidence 221 23345544347889999999999999972 2 12344557889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.........+. ..+...|.+. .| ..++.+++.+.+++.| |++...+.
T Consensus 141 kpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~ 195 (267)
T 3kkz_A 141 KKGGYLAVSECSWFTDERP--------AEINDFWMDA---------------YP-EIDTIPNQVAKIHKAG-YLPVATFI 195 (267)
T ss_dssp EEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCEEHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCEEEEEEeeecCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 9999999987654332111 1122333211 12 4578999999999999 99887765
Q ss_pred Ee-ecccccccCcccccccccccccchhhhHHHHHhhhhHHHHhhchhHHHHHHHHHHHHHHhhhhhcCCceEEEEEEEE
Q 018892 268 SE-VNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLT 346 (349)
Q Consensus 268 ~~-~~w~~~~~~~~~~d~~~~~~~~~~~~a~~iRA~~ep~l~~hfg~~i~delF~r~~~~v~~~~~~~~~~~~~~~~~l~ 346 (349)
+. ..|. ..+...+..+.+.+...+-....+.++.+...+.++ ....+...+...+.+++
T Consensus 196 ~~~~~w~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~f~~~~ 255 (267)
T 3kkz_A 196 LPENCWT-------------------DHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEE-LYHKYKEYYGYTFFIAK 255 (267)
T ss_dssp CCGGGTT-------------------TTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-HHHHHTTTEEEEEEEEE
T ss_pred CCHhHHH-------------------HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHhccccCeEeehhh
Confidence 43 1231 122233334444444443333444444444443222 22234445566666666
Q ss_pred ec
Q 018892 347 KI 348 (349)
Q Consensus 347 r~ 348 (349)
|.
T Consensus 256 ~~ 257 (267)
T 3kkz_A 256 KI 257 (267)
T ss_dssp EC
T ss_pred HH
Confidence 64
No 18
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.55 E-value=7.3e-06 Score=75.71 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=60.6
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+| +++|+++|..++|++.. .|+..+|+.=.+-|+|||++++.......
T Consensus 126 ~~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 126 FD-EPVDRIVSIGAFEHFGH-------------------------------ERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp CC-CCCSEEEEESCGGGTCT-------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred CC-CCeeEEEEeCchhhcCh-------------------------------HHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 46 89999999999999752 12334555557789999999999877654
Q ss_pred CCCC-ChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 203 QDPS-SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 203 ~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P-~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
.... ..+....+. ...+.+.... ...| ...|+.+|+.+.+++.| |++.+.+.+
T Consensus 174 ~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 228 (287)
T 1kpg_A 174 PKEIHERGLPMSFT--FARFLKFIVT----------EIFPGGRLPSIPMVQECASANG-FTVTRVQSL 228 (287)
T ss_dssp HHHHTTTTCSCHHH--HHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred cccccccccccccc--ccchhhhHHh----------eeCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 1000 000000000 0011111111 0112 24579999999999998 999887644
No 19
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.54 E-value=1.3e-06 Score=81.63 Aligned_cols=178 Identities=10% Similarity=0.091 Sum_probs=94.2
Q ss_pred HHHHHHHHHhhcccC--CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhH
Q 018892 12 KPITEEAMTKLFCST--SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 89 (349)
Q Consensus 12 ~~~l~~ai~~~~~~~--~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~ 89 (349)
..++++.+..+.... .....+|.|+||++|..|+.++..+ ...+ +...+.+..-|.- -+.-...+
T Consensus 33 ~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l----~~~~-----~~~~v~~~~vD~S-~~ml~~a~--- 99 (292)
T 2aot_A 33 QEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKV----QAQY-----PGVCINNEVVEPS-AEQIAKYK--- 99 (292)
T ss_dssp HHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHH----HHHS-----TTCEEEEEEECSC-HHHHHHHH---
T ss_pred HHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHH----HhhC-----CCceeeEEEEeCC-HHHHHHHH---
Confidence 344555555543322 2357899999999997665554443 2221 1112344777732 11111111
Q ss_pred hhHHHHHHhhCCCCCCCCceEEeecCCccccc------ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHH
Q 018892 90 SFQKILRKQLGSASGAAGQCFFTGVPGSFYGR------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPC 163 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~r------lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~ 163 (349)
+......+ . .++-+.-..+..-.- =||++++|+|+++.+|||+.. |
T Consensus 100 ---~~~~~~~~--~---~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d-~------------------- 151 (292)
T 2aot_A 100 ---ELVAKTSN--L---ENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD-I------------------- 151 (292)
T ss_dssp ---HHHHTCSS--C---TTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC-H-------------------
T ss_pred ---HHHHhccC--C---CcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCC-H-------------------
Confidence 11111001 1 232221222222211 157899999999999999763 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcc
Q 018892 164 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQY 243 (349)
Q Consensus 164 v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y 243 (349)
..+|+.=.+-|||||++++.....+. .|. ..|..... . +.. .-...
T Consensus 152 -------------~~~l~~~~r~LkpgG~l~i~~~~~~~----------~~~---~~~~~~~~-~-~~~------~~~~~ 197 (292)
T 2aot_A 152 -------------PATLKFFHSLLGTNAKMLIIVVSGSS----------GWD---KLWKKYGS-R-FPQ------DDLCQ 197 (292)
T ss_dssp -------------HHHHHHHHHTEEEEEEEEEEEECTTS----------HHH---HHHHHHGG-G-SCC------CTTCC
T ss_pred -------------HHHHHHHHHHcCCCcEEEEEEecCCc----------cHH---HHHHHHHH-h-ccC------CCccc
Confidence 12334446789999999998754321 122 12222211 0 000 01235
Q ss_pred cCCHHHHHHHHhhCCceEEEEE
Q 018892 244 TPSPAEIKSEVIKEGSFTIDHL 265 (349)
Q Consensus 244 ~~s~~E~~~~ie~~GsF~i~~~ 265 (349)
+++.+|+.+.+++.| |++...
T Consensus 198 ~~~~~~~~~~l~~aG-f~~~~~ 218 (292)
T 2aot_A 198 YITSDDLTQMLDNLG-LKYECY 218 (292)
T ss_dssp CCCHHHHHHHHHHHT-CCEEEE
T ss_pred CCCHHHHHHHHHHCC-CceEEE
Confidence 688999999999999 887654
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.53 E-value=1.8e-06 Score=80.25 Aligned_cols=165 Identities=18% Similarity=0.215 Sum_probs=90.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+. +.. ..|..+|+.-|+-.. .|..-.+.+.. .+.. .+
T Consensus 70 ~~~~vLDlGcGtG~~~~~la--------~~~-----~~~~~~v~gvD~s~~-------ml~~A~~~~~~-~~~~----~~ 124 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVR--------RNI-----HHDNCKIIAIDNSPA-------MIERCRRHIDA-YKAP----TP 124 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HTC-----CSSSCEEEEEESCHH-------HHHHHHHHHHT-SCCS----SC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hhc-----CCCCCEEEEEECCHH-------HHHHHHHHHHh-hccC----ce
Confidence 34699999999998876542 211 235577887774210 11111111111 1211 23
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- -+-|.+.+ +|-.+.|+++|+++|||+.. .|...+|+.=++-|+
T Consensus 125 v~--~~~~D~~~--~~~~~~d~v~~~~~l~~~~~-------------------------------~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 125 VD--VIEGDIRD--IAIENASMVVLNFTLQFLEP-------------------------------SERQALLDKIYQGLN 169 (261)
T ss_dssp EE--EEESCTTT--CCCCSEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EE--Eeeccccc--ccccccccceeeeeeeecCc-------------------------------hhHhHHHHHHHHHcC
Confidence 31 12344433 46677999999999999751 133445556678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhc-CCcchhhhc----cCCcCcccCCHHHHHHHHhhCCceEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSE-GLIEEEKVN----CFNIPQYTPSPAEIKSEVIKEGSFTI 262 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e-G~i~~e~~d----~fn~P~y~~s~~E~~~~ie~~GsF~i 262 (349)
|||+|++.=...... ....+.+...+.+.... |+ ++.++. ...-.....|.+|+++.+++.| |+-
T Consensus 170 pGG~lii~e~~~~~~-------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 170 PGGALVLSEKFSFED-------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEEEEEEBCCSS-------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred CCcEEEEEeccCCCC-------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 999999875433321 11223333333333222 32 222211 1111223468999999999999 864
No 21
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.47 E-value=2.2e-05 Score=72.80 Aligned_cols=153 Identities=14% Similarity=0.058 Sum_probs=91.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
...+|.|+||++|..+..+... + + .+|+.-|+... . +......... .|.. .+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~--------~---~-----~~v~gvD~s~~-----~--~~~a~~~~~~-~~~~----~~ 133 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRK--------F---G-----VSIDCLNIAPV-----Q--NKRNEEYNNQ-AGLA----DN 133 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH--------H---C-----CEEEEEESCHH-----H--HHHHHHHHHH-HTCT----TT
T ss_pred CCCEEEEeCCCCCHHHHHHHHH--------h---C-----CEEEEEeCCHH-----H--HHHHHHHHHh-cCCC----cc
Confidence 4579999999999987755332 1 1 35666665321 1 1111111111 1210 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+.+++..--+|++++|++++..++||+.. | ..+|+.=.+-|+
T Consensus 134 ~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~Lk 178 (297)
T 2o57_A 134 I--TVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD-K--------------------------------LKVFQECARVLK 178 (297)
T ss_dssp E--EEEECCTTSCSSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHEE
T ss_pred e--EEEEcCcccCCCCCCCEeEEEecchhhhcCC-H--------------------------------HHHHHHHHHHcC
Confidence 2 2234566665578999999999999999753 1 134445577899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++......+..+. . .+...+..+ ..| ..++.+++.+.+++.| |++.+.+.+
T Consensus 179 pgG~l~~~~~~~~~~~~~-~-------~~~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~~~~~~~~ 234 (297)
T 2o57_A 179 PRGVMAITDPMKEDGIDK-S-------SIQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLRTFSR 234 (297)
T ss_dssp EEEEEEEEEEEECTTCCG-G-------GGHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred CCeEEEEEEeccCCCCch-H-------HHHHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 999999998765543111 0 111112111 112 3569999999999999 998877654
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.45 E-value=9.9e-06 Score=73.11 Aligned_cols=157 Identities=13% Similarity=0.160 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.. .+ + +|+..|+-.. . +......... .+- .+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~------------~~---~--~v~~vD~s~~----~---~~~a~~~~~~-~~~-----~~ 70 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSP------------YV---Q--ECIGVDATKE----M---VEVASSFAQE-KGV-----EN 70 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGG------------GS---S--EEEEEESCHH----H---HHHHHHHHHH-HTC-----CS
T ss_pred CCCEEEEEccCcCHHHHHHHH------------hC---C--EEEEEECCHH----H---HHHHHHHHHH-cCC-----CC
Confidence 457999999999998765421 11 1 5666664211 1 1111111111 121 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+-+.+..--+|++++|+++++.++||+.. | ..+|+.=.+-|+
T Consensus 71 v~--~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~Lk 115 (239)
T 1xxl_A 71 VR--FQQGTAESLPFPDDSFDIITCRYAAHHFSD-V--------------------------------RKAVREVARVLK 115 (239)
T ss_dssp EE--EEECBTTBCCSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHEE
T ss_pred eE--EEecccccCCCCCCcEEEEEECCchhhccC-H--------------------------------HHHHHHHHHHcC
Confidence 21 123444444478899999999999999752 1 123444467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++.....++. .....+...+..+ .++ ......+.+|+.+.+++.| |++..++..
T Consensus 116 pgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~~~ 174 (239)
T 1xxl_A 116 QDGRFLLVDHYAPED--------PVLDEFVNHLNRL-RDP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQKW 174 (239)
T ss_dssp EEEEEEEEEECBCSS--------HHHHHHHHHHHHH-HCT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCcEEEEEEcCCCCC--------hhHHHHHHHHHHh-ccc-----------cccCCCCHHHHHHHHHHCC-CcEEEEEee
Confidence 999999976554331 1112222222211 111 1123468999999999999 998888766
Q ss_pred eec
Q 018892 269 EVN 271 (349)
Q Consensus 269 ~~~ 271 (349)
..+
T Consensus 175 ~~~ 177 (239)
T 1xxl_A 175 NLP 177 (239)
T ss_dssp EEE
T ss_pred cCc
Confidence 533
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.43 E-value=6.6e-07 Score=78.33 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=69.8
Q ss_pred cCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceE
Q 018892 114 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 193 (349)
Q Consensus 114 vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~m 193 (349)
+-+.+..--+|++++|+++++.++||++. .|...+|+.=.+-|+|||++
T Consensus 89 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~pgG~l 137 (203)
T 3h2b_A 89 HHGTITDLSDSPKRWAGLLAWYSLIHMGP-------------------------------GELPDALVALRMAVEDGGGL 137 (203)
T ss_dssp ECCCGGGGGGSCCCEEEEEEESSSTTCCT-------------------------------TTHHHHHHHHHHTEEEEEEE
T ss_pred EeCcccccccCCCCeEEEEehhhHhcCCH-------------------------------HHHHHHHHHHHHHcCCCcEE
Confidence 33455554478899999999999999751 12334556667889999999
Q ss_pred EEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEee
Q 018892 194 VLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 270 (349)
Q Consensus 194 vl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~ 270 (349)
++........ ..++....+.+..+.+|++..+++.| |++.+++.+..
T Consensus 138 ~i~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 138 LMSFFSGPSL-----------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp EEEEECCSSC-----------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred EEEEccCCch-----------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 9998665431 11222334677889999999999999 99999887643
No 24
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.41 E-value=1.6e-06 Score=81.67 Aligned_cols=101 Identities=11% Similarity=0.128 Sum_probs=63.8
Q ss_pred CCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCC
Q 018892 125 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD 204 (349)
Q Consensus 125 ~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~ 204 (349)
++++|+++|+.++||+-.. ..|...+|+.=++-|+|||++++++++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-- 160 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFES-----------------------------YEQADMMLRNACERLSPGGYFIGTTPNSFE-- 160 (313)
T ss_dssp TCCEEEEEEETCGGGGGGS-----------------------------HHHHHHHHHHHHTTEEEEEEEEEEEECHHH--
T ss_pred CCCEEEEEEecchhhccCC-----------------------------HHHHHHHHHHHHHHhCCCcEEEEecCChHH--
Confidence 4699999999999998210 124456677778889999999999876421
Q ss_pred CCChhhhHHHHHHHHHHHHHHhc--C-------Ccchhhh------------ccCCcCcccCCHHHHHHHHhhCCceEEE
Q 018892 205 PSSKECCYIWELLATALNNMVSE--G-------LIEEEKV------------NCFNIPQYTPSPAEIKSEVIKEGSFTID 263 (349)
Q Consensus 205 ~~~~~~~~~~~~l~~al~~mv~e--G-------~i~~e~~------------d~fn~P~y~~s~~E~~~~ie~~GsF~i~ 263 (349)
+...|...-.+ | ..+.+++ .....|.|..+.+++.+++++.| |++.
T Consensus 161 ------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G-~~~v 227 (313)
T 3bgv_A 161 ------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYN-MKLV 227 (313)
T ss_dssp ------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGT-EEEE
T ss_pred ------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcC-cEEE
Confidence 11122111000 0 0011111 23356778889999999999998 8888
Q ss_pred EEEEEe
Q 018892 264 HLEVSE 269 (349)
Q Consensus 264 ~~e~~~ 269 (349)
..+.+.
T Consensus 228 ~~~~f~ 233 (313)
T 3bgv_A 228 YKKTFL 233 (313)
T ss_dssp EEEEHH
T ss_pred EecCHH
Confidence 776553
No 25
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.40 E-value=2.5e-06 Score=76.54 Aligned_cols=144 Identities=16% Similarity=0.188 Sum_probs=90.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
+-+|.|+||++|..+..+.. +..+|+.-|.-.+= .+.. ...... .+. . .+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~~~----~~~a---~~~~~~-~~~-~---~~- 116 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS-----------------PERFVVGLDISESA----LAKA---NETYGS-SPK-A---EY- 116 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB-----------------TTEEEEEECSCHHH----HHHH---HHHHTT-SGG-G---GG-
T ss_pred CCCEEEeCCCCCHHHHHHHh-----------------CCCeEEEEECCHHH----HHHH---HHHhhc-cCC-C---cc-
Confidence 35999999999998775421 23667777753211 1111 111100 000 0 12
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
+..+-+.+.. +.|+.++|+++++.++||+. |+ |...+|+.=.+-|+|
T Consensus 117 -v~~~~~d~~~-~~~~~~fD~v~~~~~l~~~~--~~-----------------------------~~~~~l~~~~~~Lkp 163 (235)
T 3lcc_A 117 -FSFVKEDVFT-WRPTELFDLIFDYVFFCAIE--PE-----------------------------MRPAWAKSMYELLKP 163 (235)
T ss_dssp -EEEECCCTTT-CCCSSCEEEEEEESSTTTSC--GG-----------------------------GHHHHHHHHHHHEEE
T ss_pred -eEEEECchhc-CCCCCCeeEEEEChhhhcCC--HH-----------------------------HHHHHHHHHHHHCCC
Confidence 2224455554 45788999999999999975 11 233455555678999
Q ss_pred CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 190 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 190 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
||++++........ ...|.|..+.+|++..+++.| |++..++...
T Consensus 164 gG~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 208 (235)
T 3lcc_A 164 DGELITLMYPITDH----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENP 208 (235)
T ss_dssp EEEEEEEECCCSCC----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECT
T ss_pred CcEEEEEEeccccc----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecC
Confidence 99999876543321 112446689999999999999 9999888765
Q ss_pred ec
Q 018892 270 VN 271 (349)
Q Consensus 270 ~~ 271 (349)
..
T Consensus 209 ~~ 210 (235)
T 3lcc_A 209 HA 210 (235)
T ss_dssp TC
T ss_pred Cc
Confidence 44
No 26
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.39 E-value=2e-05 Score=74.09 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=59.9
Q ss_pred CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCC
Q 018892 126 NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDP 205 (349)
Q Consensus 126 ~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~ 205 (349)
+++|+++|+.++|++.. .|...+|+.=.+-|+|||++++......+...
T Consensus 154 ~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 202 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGH-------------------------------ENYDDFFKRCFNIMPADGRMTVQSSVSYHPYE 202 (318)
T ss_dssp CCCSEEEEESCGGGTCG-------------------------------GGHHHHHHHHHHHSCTTCEEEEEEEECCCHHH
T ss_pred CCcCEEEEeChHHhcCH-------------------------------HHHHHHHHHHHHhcCCCcEEEEEEeccCCchh
Confidence 88999999999999752 12334555557789999999999877654200
Q ss_pred CChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 206 SSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 206 ~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P-~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
. .....-...-...+.+...+ ...| .+.|+.+|+.+.+++.| |++.+.+.+
T Consensus 203 ~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 254 (318)
T 2fk8_A 203 M-AARGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEPLSL 254 (318)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCCEEC
T ss_pred h-hhccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEEEec
Confidence 0 00000000000111111111 1123 46679999999999998 888766544
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.38 E-value=1.3e-05 Score=72.14 Aligned_cols=90 Identities=16% Similarity=0.096 Sum_probs=63.5
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
-+|++++|+++|+.++||+.. | |+..+|+.=.+-|+|||++++...+..
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~-~------------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDP-E------------------------------RLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCG-G------------------------------GHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred hcCCCCeeEEEECCchhhCCc-H------------------------------HHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 468899999999999999752 1 344566666788999999999887533
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 202 SQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
. ... +...+ + ..--.+..+.++++..+++.| |++...+.+.
T Consensus 145 ~----------~~~-~~~~~--------~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 145 S----------LYS-LINFY--------I-------DPTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp S----------HHH-HHHHT--------T-------STTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred h----------hHH-HHHHh--------c-------CccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 2 111 11110 0 111245678899999999999 9998887763
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.36 E-value=6e-06 Score=72.86 Aligned_cols=145 Identities=15% Similarity=0.154 Sum_probs=89.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.... .|..+|+.-|.-..- +......... .+- .+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~s~~~-------~~~a~~~~~~-~~~-----~~ 89 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMV--------------GEKGKVYAIDVQEEM-------VNYAWEKVNK-LGL-----KN 89 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHH--------------TTTCEEEEEESCHHH-------HHHHHHHHHH-HTC-----TT
T ss_pred CCCEEEEEecCCCHHHHHHHHHh--------------CCCcEEEEEECCHHH-------HHHHHHHHHH-cCC-----Cc
Confidence 45699999999999987654321 234677777752211 1111111111 111 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+-+.+..--+|++++|+++++.++||+.. | ..+|+.=.+-|+
T Consensus 90 ~~--~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~Lk 134 (219)
T 3dh0_A 90 VE--VLKSEENKIPLPDNTVDFIFMAFTFHELSE-P--------------------------------LKFLEELKRVAK 134 (219)
T ss_dssp EE--EEECBTTBCSSCSSCEEEEEEESCGGGCSS-H--------------------------------HHHHHHHHHHEE
T ss_pred EE--EEecccccCCCCCCCeeEEEeehhhhhcCC-H--------------------------------HHHHHHHHHHhC
Confidence 21 233455554588999999999999999742 1 234444467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++.......... + .......+.+|++..+++.| |++.+...+
T Consensus 135 pgG~l~i~~~~~~~~~~----------------------~----------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 181 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDK----------------------G----------PPPEEVYSEWEVGLILEDAG-IRVGRVVEV 181 (219)
T ss_dssp EEEEEEEEEECSSCCSS----------------------S----------CCGGGSCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred CCeEEEEEEeccccccc----------------------C----------CchhcccCHHHHHHHHHHCC-CEEEEEEee
Confidence 99999998755443200 0 01123458999999999999 998877655
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.30 E-value=6.3e-06 Score=72.30 Aligned_cols=157 Identities=13% Similarity=0.115 Sum_probs=89.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..+..+... + .+|+.-|.- .- ..+.. .+.+. .++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~------------~-----~~v~~~D~s-----~~------~~~~a-~~~~~-----~~~ 92 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL------------A-----DRVTALDGS-----AE------MIAEA-GRHGL-----DNV 92 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH------------S-----SEEEEEESC-----HH------HHHHH-GGGCC-----TTE
T ss_pred CCeEEEECCCCCHHHHHHHhc------------C-----CeEEEEeCC-----HH------HHHHH-HhcCC-----CCe
Confidence 349999999999987765432 1 355555532 10 00001 11121 222
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
..+.+.+..- +|++++|+++++.++||+.. .++..+|+.=.+-|+|
T Consensus 93 --~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~p 138 (218)
T 3ou2_A 93 --EFRQQDLFDW-TPDRQWDAVFFAHWLAHVPD-------------------------------DRFEAFWESVRSAVAP 138 (218)
T ss_dssp --EEEECCTTSC-CCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEEE
T ss_pred --EEEecccccC-CCCCceeEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHcCC
Confidence 2233455443 89999999999999999752 1234556666788999
Q ss_pred CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcC---CcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 190 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEG---LIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 190 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG---~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
||++++...++.... +...+.....+. .+.. -..+.....+++.+|+.+.+++.| |+++..+
T Consensus 139 gG~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~ 203 (218)
T 3ou2_A 139 GGVVEFVDVTDHERR------------LEQQDDSEPEVAVRRTLQD--GRSFRIVKVFRSPAELTERLTALG-WSCSVDE 203 (218)
T ss_dssp EEEEEEEEECCCC------------------------CEEEEECTT--SCEEEEECCCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred CeEEEEEeCCCCccc------------cchhhhcccccceeeecCC--cchhhHhhcCCCHHHHHHHHHHCC-CEEEeee
Confidence 999999987764320 111111110000 0000 000111233679999999999999 9988776
Q ss_pred EEe
Q 018892 267 VSE 269 (349)
Q Consensus 267 ~~~ 269 (349)
...
T Consensus 204 ~~~ 206 (218)
T 3ou2_A 204 VHP 206 (218)
T ss_dssp EET
T ss_pred ccc
Confidence 643
No 30
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.23 E-value=1.1e-05 Score=72.60 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=65.4
Q ss_pred cCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceE
Q 018892 114 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 193 (349)
Q Consensus 114 vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~m 193 (349)
+.+.+..--+|++++|+++++.++|+++. .|+..+|+.-.+-|+|||++
T Consensus 145 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l 193 (254)
T 1xtp_A 145 ILASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------ADFVKFFKHCQQALTPNGYI 193 (254)
T ss_dssp EESCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred EEccHHHCCCCCCCeEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcCCCeEE
Confidence 33455554478899999999999999752 24456667778889999999
Q ss_pred EEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 194 VLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 194 vl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
++........ +. ......+.+.++.+++++.+++.| |++.+.+..
T Consensus 194 ~i~~~~~~~~------------------------~~-----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 194 FFKENCSTGD------------------------RF-----LVDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEEEBC--C------------------------CE-----EEETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred EEEecCCCcc------------------------cc-----eecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 9987532211 00 001122456789999999999999 998877654
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.23 E-value=1.8e-05 Score=72.46 Aligned_cols=150 Identities=13% Similarity=0.144 Sum_probs=90.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.. +..+|+..|+-. ..+.. .... .+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~--------------~~~~~--a~~~---~~ 77 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-----------------QGLFVYAVEPSI--------------VMRQQ--AVVH---PQ 77 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-----------------TTCEEEEECSCH--------------HHHHS--SCCC---TT
T ss_pred CCCEEEEEcCcccHHHHHHHh-----------------CCCEEEEEeCCH--------------HHHHH--HHhc---cC
Confidence 467999999999998765431 236788888532 01111 1110 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+-+.+..--+|++++|+++++.++||+.. +..+|+.=.+-|+
T Consensus 78 --~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 122 (261)
T 3ege_A 78 --VEWFTGYAENLALPDKSVDGVISILAIHHFSH---------------------------------LEKSFQEMQRIIR 122 (261)
T ss_dssp --EEEECCCTTSCCSCTTCBSEEEEESCGGGCSS---------------------------------HHHHHHHHHHHBC
T ss_pred --CEEEECchhhCCCCCCCEeEEEEcchHhhccC---------------------------------HHHHHHHHHHHhC
Confidence 22234555554478899999999999999732 1234444467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
||++++...+....... .....+...... ...++++.+++. .+++.| |++.+.+.+
T Consensus 123 -gG~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~-~l~~aG-F~~v~~~~~ 178 (261)
T 3ege_A 123 -DGTIVLLTFDIRLAQRI-----WLYDYFPFLWED----------------ALRFLPLDEQIN-LLQENT-KRRVEAIPF 178 (261)
T ss_dssp -SSCEEEEEECGGGCCCC-----GGGGTCHHHHHH----------------HHTSCCHHHHHH-HHHHHH-CSEEEEEEC
T ss_pred -CcEEEEEEcCCchhHHH-----HHHHHHHHHhhh----------------hhhhCCCHHHHH-HHHHcC-CCceeEEEe
Confidence 99888877654432110 000111111100 113567889999 999998 998888888
Q ss_pred eeccc
Q 018892 269 EVNWN 273 (349)
Q Consensus 269 ~~~w~ 273 (349)
..|+.
T Consensus 179 ~~p~~ 183 (261)
T 3ege_A 179 LLPHD 183 (261)
T ss_dssp CEETT
T ss_pred cCCCc
Confidence 76654
No 32
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.20 E-value=9.8e-06 Score=72.22 Aligned_cols=103 Identities=14% Similarity=0.134 Sum_probs=63.6
Q ss_pred CcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhh-HhhccCceEE
Q 018892 116 GSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS-EELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra-~EL~~GG~mv 194 (349)
+.+.. ++|++++|+++++.+||++.. | ..+|+.=+ +-|+|||+++
T Consensus 93 ~d~~~-~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~~LkpgG~l~ 138 (250)
T 2p7i_A 93 SRFED-AQLPRRYDNIVLTHVLEHIDD-P--------------------------------VALLKRINDDWLAEGGRLF 138 (250)
T ss_dssp SCGGG-CCCSSCEEEEEEESCGGGCSS-H--------------------------------HHHHHHHHHTTEEEEEEEE
T ss_pred ccHHH-cCcCCcccEEEEhhHHHhhcC-H--------------------------------HHHHHHHHHHhcCCCCEEE
Confidence 34433 378999999999999999752 1 12344445 7899999999
Q ss_pred EEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhh----hccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 195 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK----VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 195 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~----~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
+..+.... ...... .+ .|...... .+....-....+.++++..+++.| |++.+.+.+.
T Consensus 139 i~~~~~~~----------~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 200 (250)
T 2p7i_A 139 LVCPNANA----------VSRQIA-VK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGIF 200 (250)
T ss_dssp EEEECTTC----------HHHHHH-HH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred EEcCChHH----------HHHHHH-HH-----cCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeeeE
Confidence 98865432 111111 11 13322210 000111124569999999999999 9998887543
No 33
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.19 E-value=8.5e-05 Score=69.18 Aligned_cols=153 Identities=15% Similarity=0.168 Sum_probs=83.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.+.. .+..+|+..|+-.. +-...+ .......+.. .+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~~-~~~~a~------~~~~~~~~~~----~~ 90 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQEL--------------KPFEQIIGSDLSAT-MIKTAE------VIKEGSPDTY----KN 90 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHS--------------SCCSEEEEEESCHH-HHHHHH------HHHHHCC-CC----TT
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCCHH-HHHHHH------HHHHhccCCC----Cc
Confidence 46799999999998877654321 13467777775211 111111 1111110100 22
Q ss_pred eEEeecCCcccccccCC------CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018892 109 CFFTGVPGSFYGRLFPR------NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 182 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~------~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~ 182 (349)
+-+ +.+.+..--++. +++|+++++.++||+ . |. .+|+.
T Consensus 91 v~~--~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~~--------------------------------~~l~~ 134 (299)
T 3g5t_A 91 VSF--KISSSDDFKFLGADSVDKQKIDMITAVECAHWF-D-FE--------------------------------KFQRS 134 (299)
T ss_dssp EEE--EECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-HH--------------------------------HHHHH
T ss_pred eEE--EEcCHHhCCccccccccCCCeeEEeHhhHHHHh-C-HH--------------------------------HHHHH
Confidence 211 233444433555 899999999999998 2 21 23444
Q ss_pred hhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCccc-CCHHHHHHHHhhCC
Q 018892 183 RSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYT-PSPAEIKSEVIKEG 258 (349)
Q Consensus 183 Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~-~s~~E~~~~ie~~G 258 (349)
=.+-|+|||.+++...+.+..... . .+...+.++.... ....|.+. |..+.++..+++.|
T Consensus 135 ~~~~LkpgG~l~i~~~~~~~~~~~-~-------~~~~~~~~~~~~~--------~~~~~~w~~p~~~~~~~~l~~~g 195 (299)
T 3g5t_A 135 AYANLRKDGTIAIWGYADPIFPDY-P-------EFDDLMIEVPYGK--------QGLGPYWEQPGRSRLRNMLKDSH 195 (299)
T ss_dssp HHHHEEEEEEEEEEEEEEEECTTC-G-------GGTTHHHHHHHCT--------TTTGGGSCTTHHHHHHTTTTTCC
T ss_pred HHHhcCCCcEEEEEecCCccccCc-H-------HHHHHHHHhccCc--------ccccchhhchhhHHHHHhhhccC
Confidence 467899999999866554321110 0 1222233332211 12335444 88899999999888
No 34
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.18 E-value=3.4e-05 Score=71.04 Aligned_cols=167 Identities=14% Similarity=0.183 Sum_probs=92.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.. . + ..+|+.-|+-..= +......+.. .+.. .+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~--------~----~----~~~v~gvD~s~~~-------~~~a~~~~~~-~~~~----~~ 115 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYER--------A----G----IGEYYGVDIAEVS-------INDARVRARN-MKRR----FK 115 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHH--------H----T----CSEEEEEESCHHH-------HHHHHHHHHT-SCCS----SE
T ss_pred CCCeEEEECCCCCHHHHHHHH--------C----C----CCEEEEEECCHHH-------HHHHHHHHHh-cCCC----cc
Confidence 457999999999998765321 1 1 1356666642211 1111111111 1110 12
Q ss_pred eEEeecCCccccccc-CCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 109 CFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 109 ~f~~~vpgSFy~rlf-P~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+..+-+.+..--+ |++++|+++++.++||+-.. ..|...+|+.=++-|
T Consensus 116 --v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~L 164 (298)
T 1ri5_A 116 --VFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFST-----------------------------SESLDIAQRNIARHL 164 (298)
T ss_dssp --EEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSS-----------------------------HHHHHHHHHHHHHTE
T ss_pred --EEEEECCccccccCCCCCcCEEEECchhhhhcCC-----------------------------HHHHHHHHHHHHHhc
Confidence 1223344444344 68999999999999996210 134556777778889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHH-HhcCC----------cch---hhh-----ccC-CcCcccCCH
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM-VSEGL----------IEE---EKV-----NCF-NIPQYTPSP 247 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m-v~eG~----------i~~---e~~-----d~f-n~P~y~~s~ 247 (349)
+|||++++..+.... ++..+. .. ....+ +.. .+. +.. ..|.++.+.
T Consensus 165 kpgG~l~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~ 230 (298)
T 1ri5_A 165 RPGGYFIMTVPSRDV----------ILERYK----QGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDF 230 (298)
T ss_dssp EEEEEEEEEEECHHH----------HHHHHH----HTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCH
T ss_pred CCCCEEEEEECCHHH----------HHHHHc----cCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCH
Confidence 999999998854321 111111 10 00000 000 000 000 234577899
Q ss_pred HHHHHHHhhCCceEEEEEEEEe
Q 018892 248 AEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 248 ~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
+|++.++++.| |++.+.+.+.
T Consensus 231 ~~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 231 TRMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp HHHHHHHHTTT-EEEEEEEEHH
T ss_pred HHHHHHHHHcC-CEEEEecCHH
Confidence 99999999999 9998886654
No 35
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.17 E-value=4.3e-06 Score=73.17 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=86.7
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCceE
Q 018892 31 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 110 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f 110 (349)
-+|.|+||++|..+..+... +..+|+.-|+-.. . +......... .+.. .++-
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~----------------~~~~v~~~D~s~~----~---~~~a~~~~~~-~~~~----~~~~ 96 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ----------------SDFSIRALDFSKH----M---NEIALKNIAD-ANLN----DRIQ 96 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH----------------SEEEEEEEESCHH----H---HHHHHHHHHH-TTCT----TTEE
T ss_pred CEEEEECCCCCHHHHHHHHc----------------CCCeEEEEECCHH----H---HHHHHHHHHh-cccc----CceE
Confidence 39999999999876654421 2367777775211 1 1111111111 1110 2222
Q ss_pred EeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccC
Q 018892 111 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 190 (349)
Q Consensus 111 ~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 190 (349)
.+-+.+..--+|++++|+++++.++||+.. ...+|+.=.+-|+||
T Consensus 97 --~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L~pg 141 (219)
T 3dlc_A 97 --IVQGDVHNIPIEDNYADLIVSRGSVFFWED---------------------------------VATAFREIYRILKSG 141 (219)
T ss_dssp --EEECBTTBCSSCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEEEE
T ss_pred --EEEcCHHHCCCCcccccEEEECchHhhccC---------------------------------HHHHHHHHHHhCCCC
Confidence 133455554488999999999999999732 122445556789999
Q ss_pred ceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 191 GRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 191 G~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
|++++...-... .+.+.+...+.... .+. ...+.......+.+|+++.+++.| |++.++.
T Consensus 142 G~l~~~~~~~~~---------~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~ 201 (219)
T 3dlc_A 142 GKTYIGGGFGNK---------ELRDSISAEMIRKN-PDW-----KEFNRKNISQENVERFQNVLDEIG-ISSYEII 201 (219)
T ss_dssp EEEEEEECCSSH---------HHHHHHHHHHHHHC-TTH-----HHHHHHHSSHHHHHHHHHHHHHHT-CSSEEEE
T ss_pred CEEEEEeccCcH---------HHHHHHHHHHHHhH-HHH-----HhhhhhccccCCHHHHHHHHHHcC-CCeEEEE
Confidence 999987522211 12233333332220 000 000101122338899999999999 8766554
No 36
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.16 E-value=2.2e-05 Score=70.90 Aligned_cols=151 Identities=14% Similarity=0.067 Sum_probs=85.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.... + .+|+.-|+-. ++-...+ ..... .|- ..+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-----------~-----~~v~gvD~s~-~~l~~a~------~~~~~-~~~----~~~ 87 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-----------G-----ITGTGIDMSS-LFTAQAK------RRAEE-LGV----SER 87 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-----------C-----CEEEEEESCH-HHHHHHH------HHHHH-TTC----TTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-----------C-----CeEEEEeCCH-HHHHHHH------HHHHh-cCC----Ccc
Confidence 45699999999999876544321 1 3455555421 1111111 11111 121 012
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+.+++..-.+ ++++|+++|..++|++.. | ..+|+.=.+-|+
T Consensus 88 v--~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~-~--------------------------------~~~l~~~~r~Lk 131 (256)
T 1nkv_A 88 V--HFIHNDAAGYVA-NEKCDVAACVGATWIAGG-F--------------------------------AGAEELLAQSLK 131 (256)
T ss_dssp E--EEEESCCTTCCC-SSCEEEEEEESCGGGTSS-S--------------------------------HHHHHHHTTSEE
T ss_pred e--EEEECChHhCCc-CCCCCEEEECCChHhcCC-H--------------------------------HHHHHHHHHHcC
Confidence 2 223456655434 889999999999999752 1 123334467899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
|||++++..+..... +.. ..+...| . ......+++.+++.+.+++.| |++..++.
T Consensus 132 pgG~l~~~~~~~~~~-~~~-------~~~~~~~--------~-------~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 186 (256)
T 1nkv_A 132 PGGIMLIGEPYWRQL-PAT-------EEIAQAC--------G-------VSSTSDFLTLPGLVGAFDDLG-YDVVEMVL 186 (256)
T ss_dssp EEEEEEEEEEEETTC-CSS-------HHHHHTT--------T-------CSCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred CCeEEEEecCcccCC-CCh-------HHHHHHH--------h-------cccccccCCHHHHHHHHHHCC-CeeEEEEe
Confidence 999999987544322 111 0011111 0 011125689999999999999 88766543
No 37
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.16 E-value=1.6e-05 Score=73.20 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=61.7
Q ss_pred CCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCC
Q 018892 125 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD 204 (349)
Q Consensus 125 ~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~ 204 (349)
..++|+|+|+++|||+... ..|+...|+.=++-|||||+|++......+.
T Consensus 154 ~~~fD~V~~~~~l~~i~~~-----------------------------~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~- 203 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCS-----------------------------LDAYRAALCNLASLLKPGGHLVTTVTLRLPS- 203 (263)
T ss_dssp CCCEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-
T ss_pred cCCCCEeeehHHHHHhcCC-----------------------------HHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-
Confidence 5699999999999997631 1355566667788999999999986432210
Q ss_pred CCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 205 PSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 205 ~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
+. .|- -..+.+..+.+|++..+++.| |++.+++...
T Consensus 204 -------~~-------------~g~--------~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 204 -------YM-------------VGK--------REFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp -------EE-------------ETT--------EEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred -------ce-------------eCC--------eEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 00 120 113455679999999999999 9999887764
No 38
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.15 E-value=0.00013 Score=70.68 Aligned_cols=154 Identities=14% Similarity=0.158 Sum_probs=92.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++.-+|+|+||++|..+..+.+ . -|..+++.-|+|. ...... .. .
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a~------------~~---~ 246 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVA--------K-------YPSINAINFDLPH-----VIQDAP------------AF---S 246 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHTTCC------------CC---T
T ss_pred cCCCEEEEeCCCcCHHHHHHHH--------h-------CCCCEEEEEehHH-----HHHhhh------------hc---C
Confidence 3567999999999987765433 2 2457888888742 111111 11 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +.-+.|+|+. -+|+. |++++++.||+++. .+...+|+.=.+-|
T Consensus 247 ~--v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 290 (368)
T 3reo_A 247 G--VEHLGGDMFD-GVPKG--DAIFIKWICHDWSD-------------------------------EHCLKLLKNCYAAL 290 (368)
T ss_dssp T--EEEEECCTTT-CCCCC--SEEEEESCGGGBCH-------------------------------HHHHHHHHHHHHHS
T ss_pred C--CEEEecCCCC-CCCCC--CEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHc
Confidence 2 3346789987 57865 99999999996542 13345566667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.=.-.++..... ... ......-+.-|+. ...-..++.+|+++++++.| |++.++..
T Consensus 291 ~pgG~l~i~e~~~~~~~~~~-~~~--~~~~~~d~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~ 354 (368)
T 3reo_A 291 PDHGKVIVAEYILPPSPDPS-IAT--KVVIHTDALMLAY------------NPGGKERTEKEFQALAMASG-FRGFKVAS 354 (368)
T ss_dssp CTTCEEEEEECCCCSSCCCC-HHH--HHHHHHHHHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCCEEEEEEeccCCCCCCc-hhh--hHHHhhhHHHHhh------------cCCCccCCHHHHHHHHHHCC-CeeeEEEE
Confidence 99999988754443321111 000 0011111111211 01123578999999999999 98877754
Q ss_pred E
Q 018892 268 S 268 (349)
Q Consensus 268 ~ 268 (349)
.
T Consensus 355 ~ 355 (368)
T 3reo_A 355 C 355 (368)
T ss_dssp E
T ss_pred e
Confidence 4
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.14 E-value=0.00017 Score=67.74 Aligned_cols=154 Identities=12% Similarity=0.041 Sum_probs=89.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
...-+|.|+||++|..++.+.... + .+|+.-|+-.. .+..-.+.... .|- ..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-----------~-----~~v~gvD~s~~-------~~~~a~~~~~~-~~~----~~ 167 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-----------G-----SRVEGVTLSAA-------QADFGNRRARE-LRI----DD 167 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-----------C-----CEEEEEESCHH-------HHHHHHHHHHH-TTC----TT
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-----------C-----CEEEEEeCCHH-------HHHHHHHHHHH-cCC----CC
Confidence 345799999999998887654321 1 34555554211 11111111111 121 01
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++- .+-+.+..--+|++++|+++++.++||+. +. .+|+.=.+-|
T Consensus 168 ~v~--~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~--------------------------------~~l~~~~~~L 211 (312)
T 3vc1_A 168 HVR--SRVCNMLDTPFDKGAVTASWNNESTMYVD--LH--------------------------------DLFSEHSRFL 211 (312)
T ss_dssp TEE--EEECCTTSCCCCTTCEEEEEEESCGGGSC--HH--------------------------------HHHHHHHHHE
T ss_pred ceE--EEECChhcCCCCCCCEeEEEECCchhhCC--HH--------------------------------HHHHHHHHHc
Confidence 221 13345544447899999999999999973 21 2334446789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++......+..... ...+..+... ..| ..++.+++++.+++.| |++...+.
T Consensus 212 kpgG~l~~~~~~~~~~~~~~---~~~~~~~~~~------------------~~~-~~~s~~~~~~~l~~aG-f~~~~~~~ 268 (312)
T 3vc1_A 212 KVGGRYVTITGCWNPRYGQP---SKWVSQINAH------------------FEC-NIHSRREYLRAMADNR-LVPHTIVD 268 (312)
T ss_dssp EEEEEEEEEEEEECTTTCSC---CHHHHHHHHH------------------HTC-CCCBHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCcEEEEEEccccccccch---hHHHHHHHhh------------------hcC-CCCCHHHHHHHHHHCC-CEEEEEEe
Confidence 99999999886665431111 1112211111 011 4788999999999999 99988876
Q ss_pred E
Q 018892 268 S 268 (349)
Q Consensus 268 ~ 268 (349)
+
T Consensus 269 ~ 269 (312)
T 3vc1_A 269 L 269 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 40
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.13 E-value=4.8e-06 Score=77.38 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=64.9
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
-+|++++|+|+|+.+|||++.. ..|+..+|+.=++-|+|||+|++...-..
T Consensus 169 ~~~~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~r~LkpGG~l~~~~~~~~ 219 (289)
T 2g72_A 169 SPAPLPADALVSAFCLEAVSPD-----------------------------LASFQRALDHITTLLRPGGHLLLIGALEE 219 (289)
T ss_dssp CSSCSSEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEEEEEEEEEEESC
T ss_pred ccCCCCCCEEEehhhhhhhcCC-----------------------------HHHHHHHHHHHHHhcCCCCEEEEEEecCc
Confidence 3678899999999999997631 12455667777889999999999742111
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEeec
Q 018892 202 SQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 271 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~~ 271 (349)
.. + ..| .-..|.++.+.+|+++.+++.| |++..++.+..+
T Consensus 220 ~~----------~-----------~~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 220 SW----------Y-----------LAG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp CE----------E-----------EET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred ce----------E-----------EcC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 00 0 001 1123567789999999999999 999998877644
No 41
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.13 E-value=3.2e-05 Score=68.38 Aligned_cols=89 Identities=8% Similarity=0.092 Sum_probs=58.9
Q ss_pred CcccccccCC-CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 116 GSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~-~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
+++..--+++ +++|++++..++|++.. .|...+|+.=++-|+|||+++
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~-------------------------------~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPA-------------------------------DMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHSCSEEEEE
T ss_pred CccccCCcccCCCEEEEEECcchhhCCH-------------------------------HHHHHHHHHHHHHcCCCcEEE
Confidence 3444433444 79999999999999741 123345556678899999965
Q ss_pred EEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEee
Q 018892 195 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 270 (349)
Q Consensus 195 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~ 270 (349)
+.....+.. ...-|.|..+.+|+++.+++ | |+++.++....
T Consensus 138 l~~~~~~~~---------------------------------~~~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~~ 178 (203)
T 1pjz_A 138 LITLEYDQA---------------------------------LLEGPPFSVPQTWLHRVMSG-N-WEVTKVGGQDT 178 (203)
T ss_dssp EEEESSCSS---------------------------------SSSSCCCCCCHHHHHHTSCS-S-EEEEEEEESSC
T ss_pred EEEEecCcc---------------------------------ccCCCCCCCCHHHHHHHhcC-C-cEEEEeccccc
Confidence 555322110 01124455789999999997 7 99988876653
No 42
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.13 E-value=0.00013 Score=69.09 Aligned_cols=153 Identities=16% Similarity=0.108 Sum_probs=90.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++..+|+|+||++|..+..+.+ . .|..++..-|+|. ..... ...... .+- ..
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a---~~~~~~-~~~----~~ 219 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLT--------A-------HEDLSGTVLDLQG-----PASAA---HRRFLD-TGL----SG 219 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHHHH---HHHHHH-TTC----TT
T ss_pred CCCCEEEEeCCChhHHHHHHHH--------H-------CCCCeEEEecCHH-----HHHHH---HHhhhh-cCc----Cc
Confidence 4568999999999966553322 2 1345666667642 11111 111111 111 02
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+.++|+ .-+|. ++|+++++++||..+. .+...+|+.=++-|
T Consensus 220 ~--v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 264 (332)
T 3i53_A 220 R--AQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD-------------------------------LSAVAILRRCAEAA 264 (332)
T ss_dssp T--EEEEECCTT-SCCCC-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHH
T ss_pred C--eEEecCCCC-CCCCC-CCcEEEEehhhccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 233668888 44677 8999999999997542 12345566667789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.-.-.++..+ ...++..- |+.. ....+|.+|+++++++.| |++.+...
T Consensus 265 ~pgG~l~i~e~~~~~~~~-----~~~~d~~~-----~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~ 320 (332)
T 3i53_A 265 GSGGVVLVIEAVAGDEHA-----GTGMDLRM-----LTYF-------------GGKERSLAELGELAAQAG-LAVRAAHP 320 (332)
T ss_dssp TTTCEEEEEECCCC---C-----CHHHHHHH-----HHHH-------------SCCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCEEEEEeecCCCCCc-----cHHHHHHH-----HhhC-------------CCCCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 999999987654433211 11222211 1111 123579999999999999 99877653
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.11 E-value=1.6e-05 Score=69.94 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=89.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.+. + .+|+.-|.-.. . +.. .....+ ..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~------------~-----~~v~~vD~s~~----~---~~~----a~~~~~------~~ 88 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA------------G-----FDVDATDGSPE----L---AAE----ASRRLG------RP 88 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT------------T-----CEEEEEESCHH----H---HHH----HHHHHT------SC
T ss_pred CCCcEEEECCCCCHHHHHHHHc------------C-----CeEEEECCCHH----H---HHH----HHHhcC------Cc
Confidence 4569999999999987655431 1 35666664221 1 111 111111 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ +-+++.. +-+++++|+++++.++|++.. .|+..+|+.=.+-|+
T Consensus 89 ~----~~~d~~~-~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 89 V----RTMLFHQ-LDAIDAYDAVWAHACLLHVPR-------------------------------DELADVLKLIWRALK 132 (211)
T ss_dssp C----EECCGGG-CCCCSCEEEEEECSCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred e----EEeeecc-CCCCCcEEEEEecCchhhcCH-------------------------------HHHHHHHHHHHHhcC
Confidence 1 2234433 238999999999999999751 244566667778899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++.+....... .+.+...+.+.+.+++++.+++.|.|++..++..
T Consensus 133 pgG~l~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 133 PGGLFYASYKSGEGEG------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEEEEEECCSSCE------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred CCcEEEEEEcCCCccc------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9999999875433210 1122234467899999999999976888877665
Q ss_pred e
Q 018892 269 E 269 (349)
Q Consensus 269 ~ 269 (349)
.
T Consensus 183 ~ 183 (211)
T 3e23_A 183 E 183 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 44
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.11 E-value=0.00012 Score=70.67 Aligned_cols=155 Identities=17% Similarity=0.243 Sum_probs=92.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++..+|+|+||++|..+..+.. . .|..+++.-|+|. ...... ..... .+- ..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a~---~~~~~-~~l----~~ 252 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLD--------A-------FPGLRGTLLERPP-----VAEEAR---ELLTG-RGL----AD 252 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHHHHH---HHHHH-TTC----TT
T ss_pred ccCcEEEEeCCCccHHHHHHHH--------H-------CCCCeEEEEcCHH-----HHHHHH---Hhhhh-cCc----CC
Confidence 3568999999999986654332 2 1457788888742 111111 11111 111 02
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.++|+ .-+|. ++|+++++..||+.+. .+...+|+.=++-|
T Consensus 253 ~v--~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 297 (369)
T 3gwz_A 253 RC--EILPGDFF-ETIPD-GADVYLIKHVLHDWDD-------------------------------DDVVRILRRIATAM 297 (369)
T ss_dssp TE--EEEECCTT-TCCCS-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHTTC
T ss_pred ce--EEeccCCC-CCCCC-CceEEEhhhhhccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 22 33668888 45677 8999999999998652 12234566667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.-.-.++... .. ...++ +.-|+..| -..++.+|+++++++.| |++.++..
T Consensus 298 ~pgG~l~i~e~~~~~~~~--~~-~~~~d-----~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 298 KPDSRLLVIDNLIDERPA--AS-TLFVD-----LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp CTTCEEEEEEEBCCSSCC--HH-HHHHH-----HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCCEEEEEEeccCCCCC--Cc-hhHhh-----HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999987655443211 00 11111 11122111 13578999999999999 99888754
No 45
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.11 E-value=2.5e-05 Score=68.73 Aligned_cols=154 Identities=13% Similarity=0.092 Sum_probs=89.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
....+|.|+||++|..+..+.. . + .+|+.-|.-.. ..+.... . . .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~---------------~-~-~~~~~~D~~~~-----------~~~~~~~-~---~---~ 75 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKE---------------N-G-TRVSGIEAFPE-----------AAEQAKE-K---L---D 75 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHT---------------T-T-CEEEEEESSHH-----------HHHHHHT-T---S---S
T ss_pred cCCCcEEEeCCCCCHHHHHHHh---------------c-C-CeEEEEeCCHH-----------HHHHHHH-h---C---C
Confidence 3567999999999988764421 1 2 46666664211 0000111 0 1 1
Q ss_pred ceEEeecCCcccc--cccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 108 QCFFTGVPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 108 ~~f~~~vpgSFy~--rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
+ + +.+.+.. .-+|++++|+++++.++|++.. | ..+|+.=.+
T Consensus 76 ~-~---~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~ 118 (230)
T 3cc8_A 76 H-V---VLGDIETMDMPYEEEQFDCVIFGDVLEHLFD-P--------------------------------WAVIEKVKP 118 (230)
T ss_dssp E-E---EESCTTTCCCCSCTTCEEEEEEESCGGGSSC-H--------------------------------HHHHHHTGG
T ss_pred c-E---EEcchhhcCCCCCCCccCEEEECChhhhcCC-H--------------------------------HHHHHHHHH
Confidence 2 2 2233333 3467899999999999999752 1 134555578
Q ss_pred hhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhc-cCCcCcccCCHHHHHHHHhhCCceEEEE
Q 018892 186 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVN-CFNIPQYTPSPAEIKSEVIKEGSFTIDH 264 (349)
Q Consensus 186 EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d-~fn~P~y~~s~~E~~~~ie~~GsF~i~~ 264 (349)
-|+|||++++....... +..+... ..... ...... .-.....+.+.+|+++.+++.| |++.+
T Consensus 119 ~L~~gG~l~~~~~~~~~-----------~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~ 181 (230)
T 3cc8_A 119 YIKQNGVILASIPNVSH-----------ISVLAPL----LAGNW-TYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISK 181 (230)
T ss_dssp GEEEEEEEEEEEECTTS-----------HHHHHHH----HTTCC-CCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEE
T ss_pred HcCCCCEEEEEeCCcch-----------HHHHHHH----hcCCc-eeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEE
Confidence 89999999998855432 1111111 11111 110000 0012335679999999999999 99988
Q ss_pred EEEEee
Q 018892 265 LEVSEV 270 (349)
Q Consensus 265 ~e~~~~ 270 (349)
.+.+..
T Consensus 182 ~~~~~~ 187 (230)
T 3cc8_A 182 VDRVYV 187 (230)
T ss_dssp EEEEEC
T ss_pred EEeccc
Confidence 887653
No 46
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.11 E-value=2.1e-05 Score=70.82 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=63.8
Q ss_pred CCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 115 PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 115 pgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
-+.+..-.+|++++|+++++.++|++.. .++..+|+.=.+-|+|||+++
T Consensus 134 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~ 182 (241)
T 2ex4_A 134 CCGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------QHLAEFLRRCKGSLRPNGIIV 182 (241)
T ss_dssp ECCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred EcChhhcCCCCCCEEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcCCCeEEE
Confidence 3455555577889999999999999752 123455666678899999999
Q ss_pred EEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 195 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 195 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
+.-...... . ++ +. ..+.+.++.+|+++.+++.| |++.+.+..
T Consensus 183 i~~~~~~~~-------~-~~---------------------~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 183 IKDNMAQEG-------V-IL---------------------DD-VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp EEEEEBSSS-------E-EE---------------------ET-TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEccCCCc-------c-ee---------------------cc-cCCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 976544320 0 00 00 11345669999999999999 998887655
No 47
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.11 E-value=4e-05 Score=70.99 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=63.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..+..+.. . + .+|+--|+- . ..+.. ..+. .++
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~--------~----~-----~~v~gvD~s-----~---------~ml~~--a~~~---~~v 83 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAE--------F----F-----ERVHAVDPG-----E---------AQIRQ--ALRH---PRV 83 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHT--------T----C-----SEEEEEESC-----H---------HHHHT--CCCC---TTE
T ss_pred CCCEEEEcCCCCHHHHHHHH--------h----C-----CEEEEEeCc-----H---------Hhhhh--hhhc---CCc
Confidence 45799999999998775421 1 2 346666632 1 11111 1111 232
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
- .+-+++-.--||++|+|+|+++.++||+. |+ .||+.=++-|||
T Consensus 84 ~--~~~~~~e~~~~~~~sfD~v~~~~~~h~~~--~~--------------------------------~~~~e~~rvLkp 127 (257)
T 4hg2_A 84 T--YAVAPAEDTGLPPASVDVAIAAQAMHWFD--LD--------------------------------RFWAELRRVARP 127 (257)
T ss_dssp E--EEECCTTCCCCCSSCEEEEEECSCCTTCC--HH--------------------------------HHHHHHHHHEEE
T ss_pred e--eehhhhhhhcccCCcccEEEEeeehhHhh--HH--------------------------------HHHHHHHHHcCC
Confidence 2 23345555558999999999999999974 21 122233567999
Q ss_pred CceEEEEecccCCC
Q 018892 190 EGRMVLTFLGRKSQ 203 (349)
Q Consensus 190 GG~mvl~~~g~~~~ 203 (349)
||+|++...+....
T Consensus 128 gG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 128 GAVFAAVTYGLTRV 141 (257)
T ss_dssp EEEEEEEEECCCBC
T ss_pred CCEEEEEECCCCCC
Confidence 99999988776543
No 48
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.10 E-value=2.2e-05 Score=70.20 Aligned_cols=148 Identities=18% Similarity=0.267 Sum_probs=89.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... + .+|+.-|.- .-. .+.. .+.... .+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~------------~-----~~v~~vD~s-----~~~------~~~a-~~~~~~----~~ 99 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT------------G-----YKAVGVDIS-----EVM------IQKG-KERGEG----PD 99 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------T-----CEEEEEESC-----HHH------HHHH-HTTTCB----TT
T ss_pred CCCeEEEEcCCCCHHHHHHHHc------------C-----CeEEEEECC-----HHH------HHHH-Hhhccc----CC
Confidence 4569999999999887654331 1 356666642 100 0111 111110 22
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+-+.+..--+|++++|+++++.++||+.. | ..+|+.=.+-|+
T Consensus 100 ~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~ 144 (242)
T 3l8d_A 100 L--SFIKGDLSSLPFENEQFEAIMAINSLEWTEE-P--------------------------------LRALNEIKRVLK 144 (242)
T ss_dssp E--EEEECBTTBCSSCTTCEEEEEEESCTTSSSC-H--------------------------------HHHHHHHHHHEE
T ss_pred c--eEEEcchhcCCCCCCCccEEEEcChHhhccC-H--------------------------------HHHHHHHHHHhC
Confidence 2 1233445554578999999999999999732 1 123444567899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++...+...... . ..+. ............+.++++..+++.| |++.+.+.+
T Consensus 145 pgG~l~i~~~~~~~~~~-----~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 145 SDGYACIAILGPTAKPR-----E-------NSYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEEEEEECTTCGGG-----G-------GGGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCeEEEEEEcCCcchhh-----h-------hhhh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 99999999866543210 0 0000 0112233556689999999999999 999887755
No 49
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.08 E-value=0.0002 Score=69.29 Aligned_cols=153 Identities=17% Similarity=0.146 Sum_probs=92.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
.+.-+|+|+||++|..+..+.+ . -|..+++.-|+|. ...... .. .
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a~------------~~---~ 244 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAA--------H-------YPTIKGVNFDLPH-----VISEAP------------QF---P 244 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHTTCC------------CC---T
T ss_pred cCCCEEEEeCCCCCHHHHHHHH--------H-------CCCCeEEEecCHH-----HHHhhh------------hc---C
Confidence 3467999999999987654432 2 2457888888752 111111 11 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +.-+.|+|+. -+|+. |+++++++||..+. +|...+|+.=++-|
T Consensus 245 ~--v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 288 (364)
T 3p9c_A 245 G--VTHVGGDMFK-EVPSG--DTILMKWILHDWSD-------------------------------QHCATLLKNCYDAL 288 (364)
T ss_dssp T--EEEEECCTTT-CCCCC--SEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHS
T ss_pred C--eEEEeCCcCC-CCCCC--CEEEehHHhccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 2 3347789998 57866 99999999995441 23345666667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHH-HHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWE-LLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~-~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
+|||++++.=.-.++..... ..+. ....-+.-|+. +..-..+|.+|+++++++.| |++.++.
T Consensus 289 ~pgG~l~i~e~~~~~~~~~~----~~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~ 351 (364)
T 3p9c_A 289 PAHGKVVLVQCILPVNPEAN----PSSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTGVKST 351 (364)
T ss_dssp CTTCEEEEEECCBCSSCCSS----HHHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCEEEEEEeccCCCCCcc----hhhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-CceEEEE
Confidence 99999988754443321111 0111 01111111211 01123478999999999999 9887775
Q ss_pred EE
Q 018892 267 VS 268 (349)
Q Consensus 267 ~~ 268 (349)
..
T Consensus 352 ~~ 353 (364)
T 3p9c_A 352 YI 353 (364)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 50
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.06 E-value=4.7e-05 Score=67.77 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=65.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
...+|.|+||++|..+..+... + .+|+.-|.-.+-. + ........ .+. +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~------------~-----~~~~~~D~s~~~~----~---~a~~~~~~-~~~------~ 85 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK------------F-----KNTWAVDLSQEML----S---EAENKFRS-QGL------K 85 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG------------S-----SEEEEECSCHHHH----H---HHHHHHHH-TTC------C
T ss_pred CCCeEEEeCCCCCHHHHHHHHC------------C-----CcEEEEECCHHHH----H---HHHHHHhh-cCC------C
Confidence 4579999999999988755321 1 3566666432111 1 11111111 110 1
Q ss_pred eEEeecCCcccccccCCCceeEEEecc-cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~-alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+..+.+.+..-.+| +++|+++++. +|||+.. ..|...+|+.=++-|
T Consensus 86 --~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~------------------------------~~~~~~~l~~~~~~L 132 (246)
T 1y8c_A 86 --PRLACQDISNLNIN-RKFDLITCCLDSTNYIID------------------------------SDDLKKYFKAVSNHL 132 (246)
T ss_dssp --CEEECCCGGGCCCS-CCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHTTE
T ss_pred --eEEEecccccCCcc-CCceEEEEcCccccccCC------------------------------HHHHHHHHHHHHHhc
Confidence 12234455544455 8999999998 9999742 124556777778899
Q ss_pred ccCceEEEEecc
Q 018892 188 VAEGRMVLTFLG 199 (349)
Q Consensus 188 ~~GG~mvl~~~g 199 (349)
+|||++++.+..
T Consensus 133 ~pgG~l~~~~~~ 144 (246)
T 1y8c_A 133 KEGGVFIFDINS 144 (246)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCcEEEEEecC
Confidence 999999998754
No 51
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.05 E-value=0.00014 Score=69.24 Aligned_cols=155 Identities=12% Similarity=0.115 Sum_probs=93.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|+|+||++|..+..+.+ . .|..+++.-|+|. .-...+. .... .+.. .+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~--~~~~a~~------~~~~-~~~~----~~- 230 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLR--------R-------HPQLTGQIWDLPT--TRDAARK------TIHA-HDLG----GR- 230 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEECGG--GHHHHHH------HHHH-TTCG----GG-
T ss_pred CCEEEEeCCCcCHHHHHHHH--------h-------CCCCeEEEEECHH--HHHHHHH------HHHh-cCCC----Cc-
Confidence 68999999999987665442 2 1457788889853 2222221 1111 1110 12
Q ss_pred EEeecCCcccccc-cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 110 FFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 110 f~~~vpgSFy~rl-fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+.|+|+..- ++++++|+++++..||+++. .+...+|+.=.+-|+
T Consensus 231 -v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L~ 278 (352)
T 3mcz_A 231 -VEFFEKNLLDARNFEGGAADVVMLNDCLHYFDA-------------------------------REAREVIGHAAGLVK 278 (352)
T ss_dssp -EEEEECCTTCGGGGTTCCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTEE
T ss_pred -eEEEeCCcccCcccCCCCccEEEEecccccCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 334667887654 35567999999999998642 134456666678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 264 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~ 264 (349)
|||++++.-...++.... ..+..+.... -|+.-+ -...++.+|+++++++.| |++.+
T Consensus 279 pgG~l~i~e~~~~~~~~~-----~~~~~~~~~~-~~~~~~------------~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 279 PGGALLILTMTMNDDRVT-----PALSADFSLH-MMVNTN------------HGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp EEEEEEEEEECCCTTSSS-----SHHHHHHHHH-HHHHST------------TCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEEEeccCCCCCC-----CchHHHhhHH-HHhhCC------------CCCcCCHHHHHHHHHHCC-Cceee
Confidence 999999876554432111 1111111111 111110 112468999999999999 98877
No 52
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.05 E-value=4.1e-05 Score=67.97 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=61.1
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
-+|++++|+++++.++||+.. | ..+|+.=.+-|+|||++++......
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 97 PLKDESFDFALMVTTICFVDD-P--------------------------------ERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp CSCTTCEEEEEEESCGGGSSC-H--------------------------------HHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCCCCCeeEEEEcchHhhccC-H--------------------------------HHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 367889999999999999742 1 1234444677999999999886543
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 202 SQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
. .+.. .+... ..| ..+.....+.+.+|+++.+++.| |++.+....
T Consensus 144 ~----------~~~~---~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 144 S----------FLGR---EYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp S----------HHHH---HHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred c----------HHHH---HHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 2 1111 11111 111 12334456789999999999999 998877654
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.04 E-value=6e-05 Score=70.60 Aligned_cols=168 Identities=15% Similarity=0.087 Sum_probs=94.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+..-+|.|+||++|..++.+.. ...|..+|+.-|+-..= + +....... ..+..+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~--------------~~~~~~~v~gvD~s~~~-------~----~~a~~~~~-~~~~~~ 170 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDY--------------SACPGVQLVGIDYDPEA-------L----DGATRLAA-GHALAG 170 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCC--------------TTCTTCEEEEEESCHHH-------H----HHHHHHHT-TSTTGG
T ss_pred CCCCEEEEecCCCCHHHHHHHH--------------hcCCCCeEEEEECCHHH-------H----HHHHHHHH-hcCCCC
Confidence 3457899999999988763310 12345778887752110 0 01111100 000011
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.+.+..--+| +++|+++++.++||+.. | .....||+.=.+-|
T Consensus 171 ~v--~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~-~-----------------------------~~~~~~l~~~~~~L 217 (305)
T 3ocj_A 171 QI--TLHRQDAWKLDTR-EGYDLLTSNGLNIYEPD-D-----------------------------ARVTELYRRFWQAL 217 (305)
T ss_dssp GE--EEEECCGGGCCCC-SCEEEEECCSSGGGCCC-H-----------------------------HHHHHHHHHHHHHE
T ss_pred ce--EEEECchhcCCcc-CCeEEEEECChhhhcCC-H-----------------------------HHHHHHHHHHHHhc
Confidence 22 2244666665567 99999999999998652 1 11233555557889
Q ss_pred ccCceEEEEecccCCCCCCCh-----hh-hHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSK-----EC-CYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFT 261 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~-----~~-~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~ 261 (349)
+|||++++....++....... .. ..........+.+....+ -..+++.+|+++.+++.| |+
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-F~ 284 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPR------------WNALRTHAQTRAQLEEAG-FT 284 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCS------------CCCCCCHHHHHHHHHHTT-CE
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhh------------hhccCCHHHHHHHHHHCC-CE
Confidence 999999999877654311110 00 001111222222221111 114579999999999999 99
Q ss_pred EEEEEE
Q 018892 262 IDHLEV 267 (349)
Q Consensus 262 i~~~e~ 267 (349)
+.+.+.
T Consensus 285 ~v~~~~ 290 (305)
T 3ocj_A 285 DLRFED 290 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 987764
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.03 E-value=3.4e-05 Score=67.19 Aligned_cols=144 Identities=16% Similarity=0.101 Sum_probs=87.8
Q ss_pred EEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCceEE
Q 018892 32 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFF 111 (349)
Q Consensus 32 ~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f~ 111 (349)
+|.|+||++|..+..+.+. + .+|+.-|.-.. ..+ ........ .+ .+ +
T Consensus 32 ~vLdiGcG~G~~~~~l~~~------------~-----~~v~~vD~s~~----~~~---~a~~~~~~-~~------~~--~ 78 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL------------G-----YEVTAVDQSSV----GLA---KAKQLAQE-KG------VK--I 78 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT------------T-----CEEEEECSSHH----HHH---HHHHHHHH-HT------CC--E
T ss_pred CEEEECCCCCHhHHHHHhC------------C-----CeEEEEECCHH----HHH---HHHHHHHh-cC------Cc--e
Confidence 9999999999987644321 1 36666664321 111 11111111 11 11 1
Q ss_pred eecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCc
Q 018892 112 TGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEG 191 (349)
Q Consensus 112 ~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG 191 (349)
..+.+.+..--+|++++|+++++. .|| + ..|...+|+.=.+-|+|||
T Consensus 79 ~~~~~d~~~~~~~~~~fD~v~~~~-~~~----~----------------------------~~~~~~~l~~~~~~L~pgG 125 (202)
T 2kw5_A 79 TTVQSNLADFDIVADAWEGIVSIF-CHL----P----------------------------SSLRQQLYPKVYQGLKPGG 125 (202)
T ss_dssp EEECCBTTTBSCCTTTCSEEEEEC-CCC----C----------------------------HHHHHHHHHHHHTTCCSSE
T ss_pred EEEEcChhhcCCCcCCccEEEEEh-hcC----C----------------------------HHHHHHHHHHHHHhcCCCc
Confidence 223345544457889999999853 344 1 1234556666678899999
Q ss_pred eEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEeec
Q 018892 192 RMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 271 (349)
Q Consensus 192 ~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~~ 271 (349)
++++......+.. ...| ....+.++.+.+|+++.++ | |++.+++....+
T Consensus 126 ~l~~~~~~~~~~~--------------------~~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 126 VFILEGFAPEQLQ--------------------YNTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp EEEEEEECTTTGG--------------------GTSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred EEEEEEecccccc--------------------CCCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 9999987654310 0011 1124578899999999999 6 999999887765
Q ss_pred c
Q 018892 272 W 272 (349)
Q Consensus 272 w 272 (349)
.
T Consensus 175 ~ 175 (202)
T 2kw5_A 175 L 175 (202)
T ss_dssp C
T ss_pred c
Confidence 3
No 55
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.02 E-value=5.8e-05 Score=72.26 Aligned_cols=153 Identities=19% Similarity=0.200 Sum_probs=92.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+..-+|+|+||++|..+..+.+ . .|..+++.-|+|. ... ... . ...+. ..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~--~~~---~-~~~~~----~~ 232 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLR--------E-------HPGLQGVLLDRAE-----VVA--RHR---L-DAPDV----AG 232 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHH--------H-------CTTEEEEEEECHH-----HHT--TCC---C-CCGGG----TT
T ss_pred cCCceEEEECCccCHHHHHHHH--------H-------CCCCEEEEecCHH-----Hhh--ccc---c-cccCC----CC
Confidence 4568999999999988765443 1 1457888888742 111 000 0 00010 01
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +.-+.|+|+ .-+| ++|+++++.+||+.+. .+...+|+.=++-|
T Consensus 233 ~--v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 276 (348)
T 3lst_A 233 R--WKVVEGDFL-REVP--HADVHVLKRILHNWGD-------------------------------EDSVRILTNCRRVM 276 (348)
T ss_dssp S--EEEEECCTT-TCCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTC
T ss_pred C--eEEEecCCC-CCCC--CCcEEEEehhccCCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 334678888 5567 9999999999997542 12345666667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+|||++++.-.-.++..... ....++. .-|+.. .-..++.+|+++++++.| |++.++..
T Consensus 277 kpgG~l~i~e~~~~~~~~~~--~~~~~d~-----~~~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 277 PAHGRVLVIDAVVPEGNDAH--QSKEMDF-----MMLAAR-------------TGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp CTTCEEEEEECCBCSSSSCC--HHHHHHH-----HHHHTT-------------SCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCEEEEEEeccCCCCCcc--hhhhcCh-----hhhhcC-------------CCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 99999988765443321110 0111111 112111 124578999999999999 99887754
No 56
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.02 E-value=5.9e-05 Score=71.39 Aligned_cols=115 Identities=12% Similarity=0.169 Sum_probs=65.4
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+|++++|+|.|..++||+-..+ |...+|+.=++-|+|||+|+++.+.+..
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~------------------------------~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR------------------------------HYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT------------------------------THHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred ccCCCeeEEEECchHHHhCCHH------------------------------HHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 6889999999999999975311 1134566778899999999999875432
Q ss_pred CCCCChhhh-HHHHHHHHHHHHHHhcCCcchhh-------hccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 203 QDPSSKECC-YIWELLATALNNMVSEGLIEEEK-------VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 203 ~~~~~~~~~-~~~~~l~~al~~mv~eG~i~~e~-------~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
-........ .++...- .+.....-+.++.+. -..-..|.|+-+.+|+++.+++.| |++.....+.
T Consensus 175 ~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 175 LSKLTDKKTFIIHKNLP-SSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp HTTCCSCEEEECCSSSC-TTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred HHHHHhcCCcccccccc-cccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCC-CEEEEecChH
Confidence 100000000 0000000 000000000000111 012345678888999999999999 9988776654
No 57
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.02 E-value=0.00036 Score=63.56 Aligned_cols=168 Identities=9% Similarity=0.012 Sum_probs=93.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCc-----hHHHHHhhHhhHHHHHHhhCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGND-----FNTIFRSLASFQKILRKQLGSAS 103 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~ND-----Fn~LF~~l~~~~~~~~~~~~~~~ 103 (349)
..-+|.|+||++|..++.+... . | |..+|+.-|+-.+. .-...+. .+.. .+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--------~---g---~~~~v~gvD~s~~~~~~~~~~~~a~~------~~~~-~~~-- 99 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQ--------V---G---SSGHVTGIDIASPDYGAPLTLGQAWN------HLLA-GPL-- 99 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH--------H---C---TTCEEEEECSSCTTCCSSSCHHHHHH------HHHT-STT--
T ss_pred CCCEEEEeCCCCCHHHHHHHHH--------h---C---CCCEEEEEECCccccccHHHHHHHHH------HHHh-cCC--
Confidence 3569999999999987754321 1 2 34678888876542 2222221 1111 110
Q ss_pred CCCCceEEeecCCc-cccc--ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 018892 104 GAAGQCFFTGVPGS-FYGR--LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 180 (349)
Q Consensus 104 ~~~~~~f~~~vpgS-Fy~r--lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL 180 (349)
..++-+ +.+. +... -+|++++|+++|+.++|++.. |. .++
T Consensus 100 --~~~v~~--~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~-~~--------------------------------~~~ 142 (275)
T 3bkx_A 100 --GDRLTV--HFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS-AN--------------------------------ALA 142 (275)
T ss_dssp --GGGEEE--ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC-HH--------------------------------HHH
T ss_pred --CCceEE--EECChhhhccCCCCCCCEEEEEEccchhhCCC-HH--------------------------------HHH
Confidence 012222 3333 4332 257899999999999999753 10 123
Q ss_pred HHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHH-HHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCc
Q 018892 181 KCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT-ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGS 259 (349)
Q Consensus 181 ~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~-al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~Gs 259 (349)
+...+=++|||++++.-.......+ .....++..+.. .+... . .+........+|.+++++.+++.|
T Consensus 143 ~~~~~l~~~gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~s~~~l~~~l~~aG- 210 (275)
T 3bkx_A 143 LLFKNMAAVCDHVDVAEWSMQPTAL--DQIGHLQAAMIQGLLYAI-A--------PSDVANIRTLITPDTLAQIAHDNT- 210 (275)
T ss_dssp HHHHHHTTTCSEEEEEEECSSCSSG--GGHHHHHHHHHHHHHHHH-S--------CCTTCSCCCCCCHHHHHHHHHHHT-
T ss_pred HHHHHHhCCCCEEEEEEecCCCCch--hhhhHHHHHHHHHHHhhc-c--------ccccccccccCCHHHHHHHHHHCC-
Confidence 3333344569999998776654311 111112222221 12111 0 011223446799999999999999
Q ss_pred eEEEEEEEE
Q 018892 260 FTIDHLEVS 268 (349)
Q Consensus 260 F~i~~~e~~ 268 (349)
|++.+.+.+
T Consensus 211 f~~~~~~~~ 219 (275)
T 3bkx_A 211 WTYTAGTIV 219 (275)
T ss_dssp CEEEECCCB
T ss_pred CeeEEEEEe
Confidence 999877665
No 58
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.00 E-value=1.4e-05 Score=72.23 Aligned_cols=167 Identities=16% Similarity=0.209 Sum_probs=89.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... + +. +|+.-|+-.. .+ +..+..... .+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~------------~---~~-~v~~vD~s~~-------~~----~~a~~~~~~-----~~ 91 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH------------G---AK-KVLGIDLSER-------ML----TEAKRKTTS-----PV 91 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------T---CS-EEEEEESCHH-------HH----HHHHHHCCC-----TT
T ss_pred CCCEEEEECCCCCHHHHHHHHc------------C---CC-EEEEEECCHH-------HH----HHHHHhhcc-----CC
Confidence 5689999999999876654321 1 21 6667775210 01 111111110 22
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+.+++..--+|++++|+++++.++||+.. ...+|+.=.+-|+
T Consensus 92 ~--~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 92 V--CYEQKAIEDIAIEPDAYNVVLSSLALHYIAS---------------------------------FDDICKKVYINLK 136 (253)
T ss_dssp E--EEEECCGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEE
T ss_pred e--EEEEcchhhCCCCCCCeEEEEEchhhhhhhh---------------------------------HHHHHHHHHHHcC
Confidence 2 1233455544478899999999999999832 1234455577899
Q ss_pred cCceEEEEecccCCCCCC------ChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEE
Q 018892 189 AEGRMVLTFLGRKSQDPS------SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTI 262 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~------~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i 262 (349)
|||++++........... ...... ....+.....++..... ...-....|.+|.+|+++.++++| |++
T Consensus 137 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F~~ 210 (253)
T 3g5l_A 137 SSGSFIFSVEHPVFTADGRQDWYTDETGNK----LHWPVDRYFNESMRTSH-FLGEDVQKYHRTVTTYIQTLLKNG-FQI 210 (253)
T ss_dssp EEEEEEEEEECHHHHSSSSCSCEECSSCCE----EEEEECCTTCCCEEEEE-ETTEEEEEECCCHHHHHHHHHHTT-EEE
T ss_pred CCcEEEEEeCCCccccCccccceeccCCce----EEEEeccccccceEEEe-eccccCccEecCHHHHHHHHHHcC-Cee
Confidence 999999986432110000 000000 00000000111111100 001134567789999999999999 999
Q ss_pred EEEEEE
Q 018892 263 DHLEVS 268 (349)
Q Consensus 263 ~~~e~~ 268 (349)
.+++..
T Consensus 211 ~~~~e~ 216 (253)
T 3g5l_A 211 NSVIEP 216 (253)
T ss_dssp EEEECC
T ss_pred eeeecC
Confidence 887654
No 59
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.99 E-value=0.0002 Score=68.62 Aligned_cols=158 Identities=17% Similarity=0.156 Sum_probs=90.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+...+|.|+||++|..++.+.. . .|..+++.-|+| +.-...+ ..... .+- ..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~--~~~~~a~------~~~~~-~~~----~~ 232 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIAL--------R-------APHLRGTLVELA--GPAERAR------RRFAD-AGL----AD 232 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECH--HHHHHHH------HHHHH-TTC----TT
T ss_pred CCCCEEEEECCCcCHHHHHHHH--------H-------CCCCEEEEEeCH--HHHHHHH------HHHHh-cCC----CC
Confidence 3467999999999976654432 2 145788888872 1111111 11111 111 01
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.++|.. -+|.+ +|+++++..+|+++. .+...+|+.=.+-|
T Consensus 233 ~v--~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L 277 (374)
T 1qzz_A 233 RV--TVAEGDFFK-PLPVT-ADVVLLSFVLLNWSD-------------------------------EDALTILRGCVRAL 277 (374)
T ss_dssp TE--EEEECCTTS-CCSCC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred ce--EEEeCCCCC-cCCCC-CCEEEEeccccCCCH-------------------------------HHHHHHHHHHHHhc
Confidence 22 235677776 45664 999999999987431 12234555557889
Q ss_pred ccCceEEEEec--ccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEE
Q 018892 188 VAEGRMVLTFL--GRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 265 (349)
Q Consensus 188 ~~GG~mvl~~~--g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~ 265 (349)
+|||++++.-. ..++.. ...+..+...+ -++..| ...++.+|+++++++.| |++.++
T Consensus 278 ~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~ 336 (374)
T 1qzz_A 278 EPGGRLLVLDRADVEGDGA------DRFFSTLLDLR-MLTFMG-------------GRVRTRDEVVDLAGSAG-LALASE 336 (374)
T ss_dssp EEEEEEEEEECCH-------------HHHHHHHHHH-HHHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEE
T ss_pred CCCcEEEEEechhhcCCCC------CcchhhhcchH-HHHhCC-------------CcCCCHHHHHHHHHHCC-CceEEE
Confidence 99999998765 332210 01111111111 111111 24579999999999999 998887
Q ss_pred EEEe
Q 018892 266 EVSE 269 (349)
Q Consensus 266 e~~~ 269 (349)
....
T Consensus 337 ~~~~ 340 (374)
T 1qzz_A 337 RTSG 340 (374)
T ss_dssp EEEC
T ss_pred EECC
Confidence 6654
No 60
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.98 E-value=3.3e-05 Score=67.79 Aligned_cols=92 Identities=18% Similarity=0.158 Sum_probs=59.5
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
.+.+++|+++++.++| .. .| ..+|+.=.+-|+|||++++.......
T Consensus 112 ~~~~~fD~v~~~~~l~-~~-~~--------------------------------~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQ-DI--------------------------------IELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CCCCCEEEEEEESCCC-SS-CC--------------------------------HHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred ccCCCccEEEECchhh-hh-hH--------------------------------HHHHHHHHHHhCCCeEEEEEecCccc
Confidence 4555699999999999 21 11 12444556789999999999876543
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhcc-----CCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 203 QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNC-----FNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 203 ~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~-----fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
..... ..++.. .+.... ...+.++++.+|++..+++.| |++.+++.
T Consensus 158 ~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 208 (227)
T 3e8s_A 158 VADGD-----------------YQDGWR-EESFAGFAGDWQPMPWYFRTLASWLNALDMAG-LRLVSLQE 208 (227)
T ss_dssp TCTTC-----------------CSCEEE-EECCTTSSSCCCCEEEEECCHHHHHHHHHHTT-EEEEEEEC
T ss_pred cCccc-----------------cccccc-hhhhhccccCcccceEEEecHHHHHHHHHHcC-CeEEEEec
Confidence 21100 000110 000111 246778899999999999999 99988865
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.97 E-value=3.7e-05 Score=70.00 Aligned_cols=46 Identities=13% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCceeEEEecc-cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 125 RNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 125 ~~Svh~~~Ss~-alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
++++|+++++. ++||+.. ..|+..+|+.=++-|+|||++++.....
T Consensus 108 ~~~fD~v~~~~~~l~~~~~------------------------------~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHLAG------------------------------QAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp SCCEEEEEECTTGGGGSCH------------------------------HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred cCCcCEEEEcCchhhhcCC------------------------------HHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 78999999998 9999752 2355667777788999999999975433
No 62
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.97 E-value=0.00012 Score=70.71 Aligned_cols=160 Identities=14% Similarity=0.153 Sum_probs=92.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
+.-+|+|+||++|..++.+.+ . .|..+++.-|+|. ...... +... +.+. ..+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a~---~~~~-~~~~----~~~ 230 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQ--------Y-------NKEVEVTIVDLPQ-----QLEMMR---KQTA-GLSG----SER 230 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHH--------H-------STTCEEEEEECHH-----HHHHHH---HHHT-TCTT----GGG
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------h-------CCCCEEEEEeCHH-----HHHHHH---HHHH-hcCc----ccc
Confidence 457999999999988765442 1 1457888999752 111111 1111 1110 012
Q ss_pred eEEeecCCcccccc--cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 109 CFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 109 ~f~~~vpgSFy~rl--fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
+..+.|+|+..- +| +++|+++++..||.++. .+...+|+.=++-
T Consensus 231 --v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~ 276 (363)
T 3dp7_A 231 --IHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE-------------------------------EEVISILTRVAQS 276 (363)
T ss_dssp --EEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH-------------------------------HHHHHHHHHHHHH
T ss_pred --eEEEEccccccCCCCC-CCcCEEEEechhhhCCH-------------------------------HHHHHHHHHHHHh
Confidence 334678888752 67 89999999999985441 1334556666788
Q ss_pred hccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 187 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 187 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
|+|||++++.-...++... . ...+.. .....+|.. ........+|.+|+++++++.| |++.++.
T Consensus 277 L~pgG~l~i~e~~~~~~~~--~--~~~~~~-~~~~~~~~~----------~~~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 277 IGKDSKVYIMETLWDRQRY--E--TASYCL-TQISLYFTA----------MANGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp CCTTCEEEEEECCTTSCSS--H--HHHHHH-HHHHHHHHH----------SSCSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred cCCCcEEEEEeeccCCccc--c--chhhHH-HHhhhhHHh----------hhCCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 9999999886544333211 1 111111 111111100 0011234569999999999999 8886653
No 63
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.95 E-value=0.00084 Score=63.34 Aligned_cols=152 Identities=18% Similarity=0.268 Sum_probs=89.8
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHH-hhHhhHHHHHHhhCCCCCCCCce
Q 018892 31 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFR-SLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~-~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.+|.|+||++|..+..+. +. .|..+++.-|+|. .-...+ .+... . .. .+
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~--~~~~a~~~~~~~----~--~~------~~- 218 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------QA-------EPSARGVMLDREG--SLGVARDNLSSL----L--AG------ER- 218 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEECTT--CTHHHHHHTHHH----H--HT------TS-
T ss_pred CEEEEeCCCchHHHHHHH--------HH-------CCCCEEEEeCcHH--HHHHHHHHHhhc----C--CC------Cc-
Confidence 899999999997665443 22 1457889999842 222222 11110 0 01 22
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
+..+.|+|... +| +++|+++++..+|-.+. .+...+|+.=++-|+|
T Consensus 219 -v~~~~~d~~~~-~~-~~~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 219 -VSLVGGDMLQE-VP-SNGDIYLLSRIIGDLDE-------------------------------AASLRLLGNCREAMAG 264 (334)
T ss_dssp -EEEEESCTTTC-CC-SSCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHHHSCT
T ss_pred -EEEecCCCCCC-CC-CCCCEEEEchhccCCCH-------------------------------HHHHHHHHHHHHhcCC
Confidence 23356788874 66 68999999999983221 1223455555678999
Q ss_pred CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 190 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 190 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
||++++.-...++.... .....++. .-|...| -..++.+|+++++++.| |++.+...
T Consensus 265 gG~l~i~e~~~~~~~~~--~~~~~~~~-----~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 321 (334)
T 2ip2_A 265 DGRVVVIERTISASEPS--PMSVLWDV-----HLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVD 321 (334)
T ss_dssp TCEEEEEECCBCSSSCC--HHHHHHHH-----HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCEEEEEEeccCCCCCc--chhHHhhh-----HhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEE
Confidence 99999886554432111 10111121 1111111 13468999999999999 98877653
No 64
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.95 E-value=0.00016 Score=69.59 Aligned_cols=154 Identities=14% Similarity=0.172 Sum_probs=90.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|+|+||++|..++.+. ++ -|.+.+..-|+|. +-.... ... ...+. .+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~~-------~p~~~~~~~dlp~-----v~~~a~---~~~-~~~~~-----~r 229 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------SL-------YPGCKITVFDIPE-----VVWTAK---QHF-SFQEE-----EQ 229 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------HH-------CSSCEEEEEECHH-----HHHHHH---HHS-CC--C-----CS
T ss_pred cCCeEEeeCCCCCHHHHHHH--------Hh-------CCCceeEeccCHH-----HHHHHH---Hhh-hhccc-----Cc
Confidence 34589999999998655333 22 2568888889873 111111 100 00011 23
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..++|+|+..-+|. -|+++.++.||-.+. .+-..+|+.=++-|+
T Consensus 230 --v~~~~gD~~~~~~~~--~D~~~~~~vlh~~~d-------------------------------~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 230 --IDFQEGDFFKDPLPE--ADLYILARVLHDWAD-------------------------------GKCSHLLERIYHTCK 274 (353)
T ss_dssp --EEEEESCTTTSCCCC--CSEEEEESSGGGSCH-------------------------------HHHHHHHHHHHHHCC
T ss_pred --eeeecCccccCCCCC--ceEEEeeeecccCCH-------------------------------HHHHHHHHHHHhhCC
Confidence 345789999875554 599999999994331 123345666677899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
|||++++.=.-.++..... ....+++ +.=|+.- .--.||.+|+++++++.| |++.++.
T Consensus 275 pgg~lli~e~~~~~~~~~~-~~~~~~d-----l~ml~~~-------------~g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 275 PGGGILVIESLLDEDRRGP-LLTQLYS-----LNMLVQT-------------EGQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp TTCEEEEEECCCCTTSCCC-HHHHHHH-----HHHHHSS-------------SCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCEEEEEEeeeCCCCCCC-HHHHHHH-----HHHHHhC-------------CCcCCCHHHHHHHHHHCC-CceEEEE
Confidence 9999988644333221111 0011111 1112111 123479999999999999 9887664
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.93 E-value=0.00019 Score=67.67 Aligned_cols=158 Identities=16% Similarity=0.145 Sum_probs=92.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
.+..+|.|+||++|..+..+. +. .|..+++.-|++ +.-...+. .... .+-. .
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~--~~~~~a~~------~~~~-~~~~----~ 215 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA--------QH-------NPNAEIFGVDWA--SVLEVAKE------NARI-QGVA----S 215 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEECH--HHHHHHHH------HHHH-HTCG----G
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HH-------CCCCeEEEEecH--HHHHHHHH------HHHh-cCCC----c
Confidence 356799999999997655433 22 145788888875 33222221 1111 1110 1
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.+.+..--+|++ +|+++++..+|..+. .+...+|+.=.+-|
T Consensus 216 ~v--~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 261 (335)
T 2r3s_A 216 RY--HTIAGSAFEVDYGND-YDLVLLPNFLHHFDV-------------------------------ATCEQLLRKIKTAL 261 (335)
T ss_dssp GE--EEEESCTTTSCCCSC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred ce--EEEecccccCCCCCC-CcEEEEcchhccCCH-------------------------------HHHHHHHHHHHHhC
Confidence 22 235567776445655 999999999997531 13345555557789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
+|||++++.-...++... .. .+..+... .-|... .....++.+|+++.+++.| |++.+..
T Consensus 262 ~pgG~l~i~e~~~~~~~~-~~----~~~~~~~~-~~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~ 321 (335)
T 2r3s_A 262 AVEGKVIVFDFIPNSDRI-TP----PDAAAFSL-VMLATT------------PNGDAYTFAEYESMFSNAG-FSHSQLH 321 (335)
T ss_dssp EEEEEEEEEECCCCTTSS-CS----HHHHHHHH-HHHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCCcEEEEEeecCCCCcC-Cc----hHHHHHHH-HHHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEE
Confidence 999999887655543211 10 11111111 111111 0124579999999999999 8887664
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.89 E-value=2.2e-05 Score=73.17 Aligned_cols=117 Identities=13% Similarity=0.142 Sum_probs=66.2
Q ss_pred CcccccccCCCceeEEE-ecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 116 GSFYGRLFPRNSVHLFH-SSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~~Svh~~~-Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
+.+.. +-+++++|+++ +..++||++. .|...+|+.=++-|+|||+++
T Consensus 140 ~d~~~-~~~~~~fD~v~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~L~pgG~l~ 187 (299)
T 3g2m_A 140 GDMSA-FALDKRFGTVVISSGSINELDE-------------------------------ADRRGLYASVREHLEPGGKFL 187 (299)
T ss_dssp CBTTB-CCCSCCEEEEEECHHHHTTSCH-------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred Cchhc-CCcCCCcCEEEECCcccccCCH-------------------------------HHHHHHHHHHHHHcCCCcEEE
Confidence 44444 22378999887 5688998641 244566667778899999999
Q ss_pred EEecccCCC--CCCChhhhHHHHH-HHHHHHHHHhcCCcc---------------hhhhccCCcCcccCCHHHHHHHHhh
Q 018892 195 LTFLGRKSQ--DPSSKECCYIWEL-LATALNNMVSEGLIE---------------EEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 195 l~~~g~~~~--~~~~~~~~~~~~~-l~~al~~mv~eG~i~---------------~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+........ .+.... ..+.. -...+ ........ ...+..+....++.+.+|+++.+++
T Consensus 188 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~ 263 (299)
T 3g2m_A 188 LSLAMSEAAESEPLERK--QELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVR 263 (299)
T ss_dssp EEEECCHHHHSCCCCC-----------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHH
T ss_pred EEeecCccccccchhcc--ceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHH
Confidence 998766432 011000 00000 00000 00000000 0011223445567899999999999
Q ss_pred CCceEEEEEEEEe
Q 018892 257 EGSFTIDHLEVSE 269 (349)
Q Consensus 257 ~GsF~i~~~e~~~ 269 (349)
.| |++.+.+.+.
T Consensus 264 aG-F~v~~~~~~~ 275 (299)
T 3g2m_A 264 SG-FDVIAQTPFA 275 (299)
T ss_dssp TT-CEEEEEEEEC
T ss_pred CC-CEEEEEEecC
Confidence 99 9999887664
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.86 E-value=9.7e-05 Score=63.07 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=55.4
Q ss_pred CcccccccCCCceeEEEec-ccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 116 GSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~~Svh~~~Ss-~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
+.+..--+|++++|+++++ ..+|+++. .+...+|+.=.+-|+|||+++
T Consensus 96 ~d~~~~~~~~~~~D~i~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~l~~~G~l~ 144 (195)
T 3cgg_A 96 GDLSVDQISETDFDLIVSAGNVMGFLAE-------------------------------DGREPALANIHRALGADGRAV 144 (195)
T ss_dssp CCTTTSCCCCCCEEEEEECCCCGGGSCH-------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccCCCCCCceeEEEECCcHHhhcCh-------------------------------HHHHHHHHHHHHHhCCCCEEE
Confidence 3444434678999999998 67887541 133556666678899999999
Q ss_pred EEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 195 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 195 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
+.+.... ..+.+++...+++.| |++.+..
T Consensus 145 ~~~~~~~------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~ 173 (195)
T 3cgg_A 145 IGFGAGR------------------------------------------GWVFGDFLEVAERVG-LELENAF 173 (195)
T ss_dssp EEEETTS------------------------------------------SCCHHHHHHHHHHHT-EEEEEEE
T ss_pred EEeCCCC------------------------------------------CcCHHHHHHHHHHcC-CEEeeee
Confidence 9874321 057889999999998 8887664
No 68
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.86 E-value=0.00038 Score=64.11 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=59.5
Q ss_pred CcccccccCC-CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 116 GSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~-~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
|.+..--+++ +++|++++..+||+|. |+ +...+++.=++-|+|||+++
T Consensus 140 ~D~~~l~~~~~~~FD~V~~~~~l~~l~--~~-----------------------------~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 140 CSIFDLPRANIGKFDRIWDRGALVAIN--PG-----------------------------DHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp SCTTTGGGGCCCCEEEEEESSSTTTSC--GG-----------------------------GHHHHHHHHHHTEEEEEEEE
T ss_pred CccccCCcccCCCEEEEEEhhhhhhCC--HH-----------------------------HHHHHHHHHHHHcCCCeEEE
Confidence 5665543443 8999999999999974 11 12234455578899999997
Q ss_pred EEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEee
Q 018892 195 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 270 (349)
Q Consensus 195 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~ 270 (349)
+.....+.. ...-|.|..+.+|+++.++. + |+|+.++....
T Consensus 189 l~~~~~~~~---------------------------------~~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 189 VAVLSYDPT---------------------------------KHAGPPFYVPSAELKRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp EEEEECCTT---------------------------------SCCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEEC
T ss_pred EEEEecCCc---------------------------------cCCCCCCCCCHHHHHHHhhC-C-eEEEEEecccc
Confidence 554332110 01124456789999999986 5 99999987653
No 69
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.85 E-value=0.00012 Score=64.17 Aligned_cols=87 Identities=16% Similarity=0.106 Sum_probs=54.6
Q ss_pred cccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEE
Q 018892 117 SFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 196 (349)
Q Consensus 117 SFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~ 196 (349)
.+..--+|++++|+++++.++||+.. | ..+|+.=.+-|+|||++++.
T Consensus 85 d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 85 WGEALPFPGESFDVVLLFTTLEFVED-V--------------------------------ERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp CTTSCCSCSSCEEEEEEESCTTTCSC-H--------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCCCCCcEEEEEEcChhhhcCC-H--------------------------------HHHHHHHHHHcCCCCEEEEE
Confidence 33333378899999999999999752 1 13344446789999999999
Q ss_pred ecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCC
Q 018892 197 FLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEG 258 (349)
Q Consensus 197 ~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~G 258 (349)
...... .|..+.. .+...|. ...-...+.|.+|++++++ |
T Consensus 132 ~~~~~~----------~~~~~~~---~~~~~~~-------~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 132 VLEALS----------PWAALYR---RLGEKGV-------LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EECTTS----------HHHHHHH---HHHHTTC-------TTGGGCCCCCHHHHHHHHC--S
T ss_pred ecCCcC----------cHHHHHH---HHhhccC-------ccccccccCCHHHHHHHhc--C
Confidence 876542 1222211 1112231 1111245679999999999 7
No 70
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.83 E-value=8.9e-05 Score=65.46 Aligned_cols=156 Identities=11% Similarity=0.023 Sum_probs=82.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..+..+.+ . .|..+|+.-|.-..--...-+.+. . .+-......++
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~-------~-~~~~~~~~~~v 86 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLK--------D-------SFFEQITGVDVSYRSLEIAQERLD-------R-LRLPRNQWERL 86 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------C-------TTCSEEEEEESCHHHHHHHHHHHT-------T-CCCCHHHHTTE
T ss_pred CCEEEEeCCCCCHHHHHHHh--------h-------CCCCEEEEEECCHHHHHHHHHHHH-------H-hcCCcccCcce
Confidence 46999999999998765432 1 133577777753221111111110 0 00000000022
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
- .+-++....-++.+++|+++++.++||+.. .++..+|+.-.+-|+|
T Consensus 87 ~--~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lkp 133 (217)
T 3jwh_A 87 Q--LIQGALTYQDKRFHGYDAATVIEVIEHLDL-------------------------------SRLGAFERVLFEFAQP 133 (217)
T ss_dssp E--EEECCTTSCCGGGCSCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHTTTCC
T ss_pred E--EEeCCcccccccCCCcCEEeeHHHHHcCCH-------------------------------HHHHHHHHHHHHHcCC
Confidence 1 122344444456689999999999999842 2345667777888999
Q ss_pred CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHH----HHHhhCCceEEEEE
Q 018892 190 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIK----SEVIKEGSFTIDHL 265 (349)
Q Consensus 190 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~----~~ie~~GsF~i~~~ 265 (349)
||.++++.... +. ..+..+.. +. ....-..+..+.+|++ .++++.| |+++..
T Consensus 134 gG~li~~~~~~-------------~~---~~~~~~~~-~~------~~~~~~~~~~~~~~l~~~~~~~~~~~G-f~v~~~ 189 (217)
T 3jwh_A 134 KIVIVTTPNIE-------------YN---VKFANLPA-GK------LRHKDHRFEWTRSQFQNWANKITERFA-YNVQFQ 189 (217)
T ss_dssp SEEEEEEEBHH-------------HH---HHTC------------------CCSCBCHHHHHHHHHHHHHHSS-EEEEEC
T ss_pred CEEEEEccCcc-------------cc---hhhccccc-cc------ccccccccccCHHHHHHHHHHHHHHcC-ceEEEE
Confidence 99776654211 11 01111100 10 0112234567999999 7888888 887554
No 71
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.83 E-value=0.00014 Score=65.58 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=65.5
Q ss_pred CCccccc-ccCC---CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccC
Q 018892 115 PGSFYGR-LFPR---NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 190 (349)
Q Consensus 115 pgSFy~r-lfP~---~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 190 (349)
.+....- .+|+ +++|+++++.+||++... ..|...+|+.=.+-|+||
T Consensus 141 ~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 141 KCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD-----------------------------LPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp ECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEE
T ss_pred EeeeccCCCCCccccCCccEEEEhhhhhhhcCC-----------------------------hHHHHHHHHHHHhhCCCC
Confidence 3444432 2356 899999999999986521 124556666667889999
Q ss_pred ceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEee
Q 018892 191 GRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 270 (349)
Q Consensus 191 G~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~ 270 (349)
|++++......+ . -..| ....+.+..+.+++.+.+++.| |++..++....
T Consensus 192 G~li~~~~~~~~---~------------------~~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 241 (265)
T 2i62_A 192 GFLVMVDALKSS---Y------------------YMIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQ 241 (265)
T ss_dssp EEEEEEEESSCC---E------------------EEET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECC
T ss_pred cEEEEEecCCCc---e------------------EEcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEecc
Confidence 999998732211 0 0001 1122345678999999999999 99999887754
Q ss_pred c
Q 018892 271 N 271 (349)
Q Consensus 271 ~ 271 (349)
.
T Consensus 242 ~ 242 (265)
T 2i62_A 242 N 242 (265)
T ss_dssp C
T ss_pred c
Confidence 3
No 72
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.82 E-value=0.00054 Score=65.37 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=92.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
+..+|.|+||++|..+..+.. . .|.++++.-|+| +.-...+ +.... .+- ..+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~--~~~~~a~------~~~~~-~~~----~~~ 234 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIAR--------R-------APHVSATVLEMA--GTVDTAR------SYLKD-EGL----SDR 234 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECT--THHHHHH------HHHHH-TTC----TTT
T ss_pred cCcEEEEeCCcCcHHHHHHHH--------h-------CCCCEEEEecCH--HHHHHHH------HHHHh-cCC----CCc
Confidence 457999999999987765442 1 145788888883 2222222 11111 111 013
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+.+++.. -+|.+ +|+++++..+|.++. .+...+|+.=.+-|+
T Consensus 235 v--~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 235 V--DVVEGDFFE-PLPRK-ADAIILSFVLLNWPD-------------------------------HDAVRILTRCAEALE 279 (360)
T ss_dssp E--EEEECCTTS-CCSSC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTEE
T ss_pred e--EEEeCCCCC-CCCCC-ccEEEEcccccCCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 2 235577776 45654 999999999986431 122345555577899
Q ss_pred cCceEEEEecc-cCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 189 AEGRMVLTFLG-RKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 189 ~GG~mvl~~~g-~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
|||++++.-.. .++... . .+..+.... -|+..| ...++.+|+++++++.| |++.+...
T Consensus 280 pgG~l~i~e~~~~~~~~~-~-----~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 338 (360)
T 1tw3_A 280 PGGRILIHERDDLHENSF-N-----EQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQ 338 (360)
T ss_dssp EEEEEEEEECCBCGGGCC-S-----HHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCcEEEEEEEeccCCCCC-c-----chhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEEe
Confidence 99999987654 332111 0 111111111 111111 14579999999999999 99988776
Q ss_pred Eee
Q 018892 268 SEV 270 (349)
Q Consensus 268 ~~~ 270 (349)
...
T Consensus 339 ~~~ 341 (360)
T 1tw3_A 339 LPS 341 (360)
T ss_dssp EEC
T ss_pred CCC
Confidence 643
No 73
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.82 E-value=3.8e-05 Score=68.50 Aligned_cols=116 Identities=15% Similarity=0.199 Sum_probs=64.3
Q ss_pred cCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceE
Q 018892 114 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 193 (349)
Q Consensus 114 vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~m 193 (349)
+.+.+..-.+|++++|+++++.++||+.. | ..+|+.=++-|+|||++
T Consensus 94 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~pgG~l 140 (243)
T 3bkw_A 94 ERADLDKLHLPQDSFDLAYSSLALHYVED-V--------------------------------ARLFRTVHQALSPGGHF 140 (243)
T ss_dssp EECCGGGCCCCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHHEEEEEEE
T ss_pred EEcChhhccCCCCCceEEEEeccccccch-H--------------------------------HHHHHHHHHhcCcCcEE
Confidence 34555554578999999999999999742 1 12344446779999999
Q ss_pred EEEecccCCCCCCChhhhHHHHHHH-HHHHHHHhcCCcchhh----hccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 194 VLTFLGRKSQDPSSKECCYIWELLA-TALNNMVSEGLIEEEK----VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 194 vl~~~g~~~~~~~~~~~~~~~~~l~-~al~~mv~eG~i~~e~----~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
++.............. ...+.-. ..| ...+...... ...-....|.++.+|+.+.+++.| |++.+++..
T Consensus 141 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~ 214 (243)
T 3bkw_A 141 VFSTEHPIYMAPARPG--WAIDAEGRRTW---PIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHVEEF 214 (243)
T ss_dssp EEEEECHHHHCCSSCS--CEECTTSCEEE---EECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred EEEeCCcccccCcCcc--eeecCCCceEE---eecccccccceeeeeccCceEEEeccHHHHHHHHHHcC-CEeeeeccC
Confidence 9987432110000000 0000000 000 0000000000 000034567789999999999999 999888654
No 74
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.77 E-value=0.00068 Score=64.90 Aligned_cols=159 Identities=13% Similarity=0.139 Sum_probs=94.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++.-+|+|+||++|..+..+... .|..+++.-|+| ..-...+ +.... .+-. +
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~---------------~p~~~~~~~D~~--~~~~~a~------~~~~~-~~~~----~ 240 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKH---------------FPELDSTILNLP--GAIDLVN------ENAAE-KGVA----D 240 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHH---------------CTTCEEEEEECG--GGHHHHH------HHHHH-TTCT----T
T ss_pred CCCCEEEEECCcccHHHHHHHHH---------------CCCCeEEEEecH--HHHHHHH------HHHHh-cCCC----C
Confidence 34679999999999977654331 135778888983 2222221 11111 1110 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++ ..+.++|..--+|+. |+++++..+|.++. .+...+|+.=.+-|
T Consensus 241 ~v--~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d-------------------------------~~~~~~l~~~~~~L 285 (359)
T 1x19_A 241 RM--RGIAVDIYKESYPEA--DAVLFCRILYSANE-------------------------------QLSTIMCKKAFDAM 285 (359)
T ss_dssp TE--EEEECCTTTSCCCCC--SEEEEESCGGGSCH-------------------------------HHHHHHHHHHHTTC
T ss_pred CE--EEEeCccccCCCCCC--CEEEEechhccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 22 335678887666665 99999999985431 23455666667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHh-cCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS-EGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~-eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
+|||++++.-...++... . .+..+ + .|.. -| .-.....+++.+|+++++++.| |++.+..
T Consensus 286 ~pgG~l~i~e~~~~~~~~-~-----~~~~~---~-~~~~~~~--------~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~ 346 (359)
T 1x19_A 286 RSGGRLLILDMVIDDPEN-P-----NFDYL---S-HYILGAG--------MPFSVLGFKEQARYKEILESLG-YKDVTMV 346 (359)
T ss_dssp CTTCEEEEEEECCCCTTS-C-----CHHHH---H-HHGGGGG--------SSCCCCCCCCGGGHHHHHHHHT-CEEEEEE
T ss_pred CCCCEEEEEecccCCCCC-c-----hHHHH---H-HHHHhcC--------CCCcccCCCCHHHHHHHHHHCC-CceEEEE
Confidence 999999776544433210 0 11111 1 2211 11 0011234589999999999999 9887765
Q ss_pred EE
Q 018892 267 VS 268 (349)
Q Consensus 267 ~~ 268 (349)
..
T Consensus 347 ~~ 348 (359)
T 1x19_A 347 RK 348 (359)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 75
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.77 E-value=0.00024 Score=61.87 Aligned_cols=153 Identities=12% Similarity=0.079 Sum_probs=83.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++..+. + +..+|+.-|.-..=- ......... .+. +-
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~-------~---------~~~~v~~vD~s~~~~-------~~a~~~~~~-~~~-----~~ 73 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFV-------E---------DGYKTYGIEISDLQL-------KKAENFSRE-NNF-----KL 73 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHH-------H---------TTCEEEEEECCHHHH-------HHHHHHHHH-HTC-----CC
T ss_pred CCCEEEEECCCCCHHHHHHHH-------h---------CCCEEEEEECCHHHH-------HHHHHHHHh-cCC-----ce
Confidence 356999999999998764331 1 124666666432111 111111111 121 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
-|.. +.+..--+|++++|+++++.++|+++ + .|...+|+.=++-|+
T Consensus 74 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~--~-----------------------------~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 74 NISK---GDIRKLPFKDESMSFVYSYGTIFHMR--K-----------------------------NDVKEAIDEIKRVLK 119 (209)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSCGGGSC--H-----------------------------HHHHHHHHHHHHHEE
T ss_pred EEEE---CchhhCCCCCCceeEEEEcChHHhCC--H-----------------------------HHHHHHHHHHHHHcC
Confidence 2222 23333336789999999999999864 1 234456666678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCc
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGS 259 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~Gs 259 (349)
|||++++......+.....+. . ..+..... ..+.......+.+.+|++..+++.|-
T Consensus 120 pgG~l~~~~~~~~~~~~~~~~--~------------~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 120 PGGLACINFLTTKDERYNKGE--K------------IGEGEFLQ-LERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp EEEEEEEEEEETTSTTTTCSE--E------------EETTEEEE-CC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred CCcEEEEEEecccchhccchh--h------------hcccccee-ccCCCceeEEecCHHHHHHHHhhcCc
Confidence 999999999876542110000 0 00010000 00111122257799999999998873
No 76
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.75 E-value=0.00013 Score=70.85 Aligned_cols=118 Identities=16% Similarity=0.182 Sum_probs=67.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhh-C-CCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-G-SASGAA 106 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~-~-~~~~~~ 106 (349)
..-+|.|+||++|..++.+... . .|..+|+..|+-.. .-...+ .......... | ...
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~--------~------~~~~~v~gvD~s~~-~l~~a~---~~~~~~~~~~~g~~~~--- 141 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKL--------V------GEHGKVIGVDMLDN-QLEVAR---KYVEYHAEKFFGSPSR--- 141 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH--------H------TTTCEEEEEECCHH-HHHHHH---HTHHHHHHHHHSSTTC---
T ss_pred CCCEEEEecCccCHHHHHHHHH--------h------CCCCEEEEEECCHH-HHHHHH---HHHHHhhhhcccccCC---
Confidence 4579999999999887655332 1 13467888886321 111111 1100010000 2 000
Q ss_pred CceEEeecCCccccc------ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 018892 107 GQCFFTGVPGSFYGR------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 180 (349)
Q Consensus 107 ~~~f~~~vpgSFy~r------lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL 180 (349)
.++ ..+-+.+..- -+|++++|+++|+.++||+.. | ..+|
T Consensus 142 ~~v--~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-~--------------------------------~~~l 186 (383)
T 4fsd_A 142 SNV--RFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTN-K--------------------------------LALF 186 (383)
T ss_dssp CCE--EEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-H--------------------------------HHHH
T ss_pred Cce--EEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCC-H--------------------------------HHHH
Confidence 122 2233444432 578999999999999999742 1 1344
Q ss_pred HHhhHhhccCceEEEEecccCC
Q 018892 181 KCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 181 ~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+.=.+-|+|||+|++.......
T Consensus 187 ~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 187 KEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp HHHHHHEEEEEEEEEEEEEESS
T ss_pred HHHHHHcCCCCEEEEEEecccc
Confidence 4556789999999998765543
No 77
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.75 E-value=0.00016 Score=64.94 Aligned_cols=94 Identities=15% Similarity=0.044 Sum_probs=54.4
Q ss_pred ceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCCC
Q 018892 127 SVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPS 206 (349)
Q Consensus 127 Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~ 206 (349)
++|+++++.++||+.. .|...+|+.=.+-|+|||++++.-.+..+.
T Consensus 124 ~~d~v~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--- 169 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPV-------------------------------EKRELLGQSLRILLGKQGAMYLIELGTGCI--- 169 (245)
T ss_dssp CSCEEEEESSSTTSCG-------------------------------GGHHHHHHHHHHHHTTTCEEEEEEECTTHH---
T ss_pred CccEEEEcchhhcCCH-------------------------------HHHHHHHHHHHHHcCCCCEEEEEeCCcccc---
Confidence 4899999999999752 123345555577899999988876654321
Q ss_pred ChhhhHHHHHHHHHHHHHHhcCCcchh---hhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 207 SKECCYIWELLATALNNMVSEGLIEEE---KVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 207 ~~~~~~~~~~l~~al~~mv~eG~i~~e---~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
..+..+... . +-.... .+..-..|. ..+.+|+.+.+ .| |++.......
T Consensus 170 -----~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 170 -----DFFNSLLEK---Y---GQLPYELLLVMEHGIRPG-IFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp -----HHHHHHHHH---H---SSCCHHHHHHHTTTCCCC-CCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred -----HHHHHHHhC---C---CCCchhhhhccccCCCCC-ccCHHHHHHHh--CC-CEEEeccccc
Confidence 111111111 0 111110 011122343 36899999999 77 9987765543
No 78
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.75 E-value=0.00014 Score=64.06 Aligned_cols=158 Identities=16% Similarity=0.049 Sum_probs=85.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.+ . .|..+|+.-|.-..--...=+.+.... +..... .+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~------~~ 85 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLK--------D-------KSFEQITGVDVSYSVLERAKDRLKIDR--LPEMQR------KR 85 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHT--------S-------TTCCEEEEEESCHHHHHHHHHHHTGGG--SCHHHH------TT
T ss_pred CCCEEEEecCCCCHHHHHHHh--------c-------CCCCEEEEEECCHHHHHHHHHHHHhhc--cccccC------cc
Confidence 346999999999987664432 1 134677777753221111111111000 000000 02
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+-++....-++++++|+++++.++||+.. .++..+|+.=++-|+
T Consensus 86 v~--~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 132 (219)
T 3jwg_A 86 IS--LFQSSLVYRDKRFSGYDAATVIEVIEHLDE-------------------------------NRLQAFEKVLFEFTR 132 (219)
T ss_dssp EE--EEECCSSSCCGGGTTCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHTTTC
T ss_pred eE--EEeCcccccccccCCCCEEEEHHHHHhCCH-------------------------------HHHHHHHHHHHHhhC
Confidence 11 122344444567789999999999999742 234566777788999
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHH----HHHhhCCceEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIK----SEVIKEGSFTIDH 264 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~----~~ie~~GsF~i~~ 264 (349)
|||.++.+.....+. . |..+. .+.. ...-..+..+.+|++ .++++.| |+++.
T Consensus 133 pgG~~i~~~~~~~~~-~--------~~~~~--------~~~~------~~~~~~~~~~~~~l~~~~~~l~~~~G-f~v~~ 188 (219)
T 3jwg_A 133 PQTVIVSTPNKEYNF-H--------YGNLF--------EGNL------RHRDHRFEWTRKEFQTWAVKVAEKYG-YSVRF 188 (219)
T ss_dssp CSEEEEEEEBGGGGG-C--------CCCT-------------------GGGCCTTSBCHHHHHHHHHHHHHHHT-EEEEE
T ss_pred CCEEEEEccchhhhh-h--------hcccC--------cccc------cccCceeeecHHHHHHHHHHHHHHCC-cEEEE
Confidence 999666554322211 0 00000 0100 011234556899999 7788888 88866
Q ss_pred EE
Q 018892 265 LE 266 (349)
Q Consensus 265 ~e 266 (349)
..
T Consensus 189 ~~ 190 (219)
T 3jwg_A 189 LQ 190 (219)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 79
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.75 E-value=0.00025 Score=61.01 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=81.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..+..+.+. + .+|+.-|.-..- +......... .+. .+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~------------~-----~~v~~vD~s~~~-------~~~a~~~~~~-~~~-----~~- 81 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN------------G-----YDVDAWDKNAMS-------IANVERIKSI-ENL-----DN- 81 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT------------T-----CEEEEEESCHHH-------HHHHHHHHHH-HTC-----TT-
T ss_pred CCeEEEEcCCCCHHHHHHHHC------------C-----CeEEEEECCHHH-------HHHHHHHHHh-CCC-----CC-
Confidence 359999999999987655421 1 356666642111 1111111111 111 12
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
+..+.+.+..--+ ++++|+++++.++||++. + |...+|+.=.+-|+|
T Consensus 82 -~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~--~-----------------------------~~~~~l~~~~~~L~~ 128 (199)
T 2xvm_A 82 -LHTRVVDLNNLTF-DRQYDFILSTVVLMFLEA--K-----------------------------TIPGLIANMQRCTKP 128 (199)
T ss_dssp -EEEEECCGGGCCC-CCCEEEEEEESCGGGSCG--G-----------------------------GHHHHHHHHHHTEEE
T ss_pred -cEEEEcchhhCCC-CCCceEEEEcchhhhCCH--H-----------------------------HHHHHHHHHHHhcCC
Confidence 2223344444334 789999999999999752 1 233455566788999
Q ss_pred CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 190 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 190 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
||++++.........+. + ....+..+.+|+++.++. |++.+.+..
T Consensus 129 gG~l~~~~~~~~~~~~~---------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 129 GGYNLIVAAMDTADYPC---------------------T----------VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp EEEEEEEEEBCCSSSCC---------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred CeEEEEEEeeccCCcCC---------------------C----------CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 99987765332221000 0 012245688999999985 998877543
No 80
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.75 E-value=0.0006 Score=57.49 Aligned_cols=80 Identities=13% Similarity=0.132 Sum_probs=55.2
Q ss_pred cccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 121 RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 121 rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
.-+|++++|+++++.++||+.. | ..+|+.=.+-|+|||++++.....
T Consensus 69 ~~~~~~~~D~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 69 KEIPDNSVDFILFANSFHDMDD-K--------------------------------QHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp GGSCTTCEEEEEEESCSTTCSC-H--------------------------------HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCCCCCceEEEEEccchhcccC-H--------------------------------HHHHHHHHHhcCCCCEEEEEEcCc
Confidence 3468899999999999999742 1 134444467899999999987655
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 201 KSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 201 ~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
.+... + .......+.+|++..++ | |++.+....
T Consensus 116 ~~~~~----------------------~----------~~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 116 ENTGI----------------------G----------PPLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp SCCSS----------------------S----------SCGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred ccccc----------------------C----------chHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 43210 0 00113368999999999 6 998777544
No 81
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.73 E-value=0.00011 Score=71.80 Aligned_cols=87 Identities=9% Similarity=0.100 Sum_probs=61.2
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+|++++|+++|+.+|||+.. ...||+.=++-|+|||+|++......+
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d---------------------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~ 213 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPY---------------------------------VQSVLEGVDALLAPDGVFVFEDPYLGD 213 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTT---------------------------------HHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred cCCCCEEEEEECChHHhcCC---------------------------------HHHHHHHHHHHcCCCeEEEEEeCChHH
Confidence 56899999999999999742 234555667889999999998643211
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccC-CcCcccCCHHHHHHHHhhCCceEEEEEEEEe
Q 018892 203 QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF-NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 203 ~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f-n~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~ 269 (349)
.+ .. ..++.+ .-.+++.+.++++..+++.| |++..++.+.
T Consensus 214 -------------~~----~~---------~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 214 -------------IV----AK---------TSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp -------------HH----HH---------TCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred -------------hh----hh---------cchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 01 00 112222 23456689999999999999 9998887763
No 82
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.71 E-value=0.00058 Score=65.85 Aligned_cols=150 Identities=16% Similarity=0.173 Sum_probs=90.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
++.-+|.|+||++|..+..+.. . .|.++++.-|+|. .... .... .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~~-----~~~~------------a~~~---~ 252 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIIS--------K-------YPLIKGINFDLPQ-----VIEN------------APPL---S 252 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHTT------------CCCC---T
T ss_pred CCCCEEEEeCCCCcHHHHHHHH--------H-------CCCCeEEEeChHH-----HHHh------------hhhc---C
Confidence 3467999999999988765432 2 1457777778631 1111 1111 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+.|+|+. -+|. .|+++++.+||+++. .+...+|+.=++-|
T Consensus 253 ~--v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-------------------------------~~~~~~l~~~~~~L 296 (372)
T 1fp1_D 253 G--IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-------------------------------EKCIEFLSNCHKAL 296 (372)
T ss_dssp T--EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred C--CEEEeCCccc-CCCC--CCEEEEecccccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 3446788887 4676 899999999997552 12234556667889
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHH---HhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM---VSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 264 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~ 264 (349)
+|||++++.-...++..... ..+.. ..+.++ +..| -..++.+|+++++++.| |++.+
T Consensus 297 ~pgG~l~i~e~~~~~~~~~~-----~~~~~-~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~ 356 (372)
T 1fp1_D 297 SPNGKVIIVEFILPEEPNTS-----EESKL-VSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG-FSKFQ 356 (372)
T ss_dssp EEEEEEEEEEEEECSSCCSS-----HHHHH-HHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-CSEEE
T ss_pred CCCCEEEEEEeccCCCCccc-----hHHHH-HHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-CceEE
Confidence 99999998854433321100 00000 111111 1111 12359999999999999 88877
Q ss_pred EEEE
Q 018892 265 LEVS 268 (349)
Q Consensus 265 ~e~~ 268 (349)
....
T Consensus 357 ~~~~ 360 (372)
T 1fp1_D 357 VACR 360 (372)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6543
No 83
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.70 E-value=0.0003 Score=65.11 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=63.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
.+..+|.|+||++|..++.+.. . -++..+|+..|+-..= +....... ...+ .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~--------~------~~~~~~v~gvD~s~~~-------~~~a~~~~-~~~~------~ 72 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMP--------L------LPEGSKYTGIDSGETL-------LAEARELF-RLLP------Y 72 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTT--------T------SCTTCEEEEEESCHHH-------HHHHHHHH-HSSS------S
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h------CCCCCEEEEEECCHHH-------HHHHHHHH-HhcC------C
Confidence 3568999999999987664321 1 1223678888753210 00000111 1111 1
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+-+.+..--+ ++++|++++..++|++.. | ..+|+.=.+-|
T Consensus 73 ~--v~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L 116 (284)
T 3gu3_A 73 D--SEFLEGDATEIEL-NDKYDIAICHAFLLHMTT-P--------------------------------ETMLQKMIHSV 116 (284)
T ss_dssp E--EEEEESCTTTCCC-SSCEEEEEEESCGGGCSS-H--------------------------------HHHHHHHHHTE
T ss_pred c--eEEEEcchhhcCc-CCCeeEEEECChhhcCCC-H--------------------------------HHHHHHHHHHc
Confidence 2 2223345554334 579999999999999752 1 12344446789
Q ss_pred ccCceEEEEecc
Q 018892 188 VAEGRMVLTFLG 199 (349)
Q Consensus 188 ~~GG~mvl~~~g 199 (349)
+|||++++.-+.
T Consensus 117 kpgG~l~~~~~~ 128 (284)
T 3gu3_A 117 KKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCCEEEEEecc
Confidence 999999988765
No 84
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.67 E-value=0.00015 Score=66.92 Aligned_cols=139 Identities=16% Similarity=0.151 Sum_probs=82.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+... + .+|+.-|.-.. .- ......... .+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~------------g-----~~v~~vD~s~~-----~~--~~a~~~~~~-~~-------- 166 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL------------G-----YDVTSWDHNEN-----SI--AFLNETKEK-EN-------- 166 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT------------T-----CEEEEEESCHH-----HH--HHHHHHHHH-TT--------
T ss_pred CCCcEEEECCCCCHHHHHHHHC------------C-----CeEEEEECCHH-----HH--HHHHHHHHH-cC--------
Confidence 3578999999999988764321 1 35666664221 11 111111111 11
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+-+..+.+.+..-.+ ++++|+++++.++||++. | ++..+|+.=.+-|+
T Consensus 167 ~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~-~------------------------------~~~~~l~~~~~~Lk 214 (286)
T 3m70_A 167 LNISTALYDINAANI-QENYDFIVSTVVFMFLNR-E------------------------------RVPSIIKNMKEHTN 214 (286)
T ss_dssp CCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCG-G------------------------------GHHHHHHHHHHTEE
T ss_pred CceEEEEeccccccc-cCCccEEEEccchhhCCH-H------------------------------HHHHHHHHHHHhcC
Confidence 112223345554333 889999999999999852 1 23345666678899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 266 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e 266 (349)
|||++++.........+. -..+.+..+.+|++..++. |++...+
T Consensus 215 pgG~l~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 215 VGGYNLIVAAMSTDDVPC-------------------------------PLPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp EEEEEEEEEEBCCSSSCC-------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred CCcEEEEEEecCCCCCCC-------------------------------CCCccccCCHHHHHHHhcC---CEEEEEE
Confidence 999988866433321110 0123467788999998864 8887764
No 85
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.67 E-value=0.0011 Score=61.46 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=60.6
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
.+|-++.|+++++.+|||++.. +...+|+.=++-|+|||+|++.....+
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~-------------------------------~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD-------------------------------VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT-------------------------------THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred cCCCCCCEEEEEechhhhCCcH-------------------------------HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 4666789999999999998741 112233444667999999999987653
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEEee-cccc
Q 018892 202 SQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV-NWNA 274 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~~-~w~~ 274 (349)
. + + .+..+...+.. .| .|+++++.+|+++.+ .| |++........ .|.+
T Consensus 201 ~--~---~---~~~~~~~~~~~---~~-----------~~~~~~s~~ei~~~l--~G-~~l~~~g~~~~~~w~p 249 (274)
T 2qe6_A 201 G--L---P---AQQKLARITRE---NL-----------GEGWARTPEEIERQF--GD-FELVEPGVVYTALWRP 249 (274)
T ss_dssp S--C---H---HHHHHHHHHHH---HH-----------SCCCCBCHHHHHHTT--TT-CEECTTCSEEGGGSSC
T ss_pred c--h---H---HHHHHHHHHHh---cC-----------CCCccCCHHHHHHHh--CC-CeEccCcEeccccccC
Confidence 2 1 1 11212222211 11 267889999999999 46 88765443332 2543
No 86
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.64 E-value=0.00046 Score=64.87 Aligned_cols=180 Identities=16% Similarity=0.160 Sum_probs=95.2
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCC--CcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhh
Q 018892 11 AKPITEEAMTKLFCSTSPTKVAIADLGCSS--GPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSL 88 (349)
Q Consensus 11 ~~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l 88 (349)
-...+..+++-+.. ..+.-+|.|+||+. |.|+..+.+.+ .|+.+|+.-|. |=.-|-.
T Consensus 62 nr~fl~rav~~l~~--~~g~~q~LDLGcG~pT~~~~~~la~~~--------------~P~arVv~VD~---sp~mLa~-- 120 (277)
T 3giw_A 62 NRDWMNRAVAHLAK--EAGIRQFLDIGTGIPTSPNLHEIAQSV--------------APESRVVYVDN---DPIVLTL-- 120 (277)
T ss_dssp HHHHHHHHHHHHHH--TSCCCEEEEESCCSCCSSCHHHHHHHH--------------CTTCEEEEEEC---CHHHHHT--
T ss_pred HHHHHHHHHHHhcc--ccCCCEEEEeCCCCCcccHHHHHHHHH--------------CCCCEEEEEeC---ChHHHHH--
Confidence 34556666655432 12346899999998 67866444322 24567777773 2111111
Q ss_pred HhhHHHHHHhhCCCCCCCCceEEeecCCccccc--ccC----CCcee-----EEEecccccccccCCCCcCCCCceeEEc
Q 018892 89 ASFQKILRKQLGSASGAAGQCFFTGVPGSFYGR--LFP----RNSVH-----LFHSSYSLQWLSQVPDGLESNKGNIFMA 157 (349)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~r--lfP----~~Svh-----~~~Ss~alHWLS~~P~~l~~n~~~i~~~ 157 (349)
-...+ ... ...-+.-+.+.+..- +++ ..++| .++|+.+||||... +
T Consensus 121 --Ar~~l----~~~----~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-~------------ 177 (277)
T 3giw_A 121 --SQGLL----AST----PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-D------------ 177 (277)
T ss_dssp --THHHH----CCC----SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-G------------
T ss_pred --HHHHh----ccC----CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-h------------
Confidence 00111 100 111122233333321 111 34555 48899999998741 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhcc
Q 018892 158 STSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNC 237 (349)
Q Consensus 158 ~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~ 237 (349)
|....|+.=.+-|+|||+|++.....+.. + .-.+.+.+.++ ..|
T Consensus 178 -----------------~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p------~~~~~~~~~~~---~~g--------- 221 (277)
T 3giw_A 178 -----------------DAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P------QEVGRVAREYA---ARN--------- 221 (277)
T ss_dssp -----------------CHHHHHHHHHTTSCTTCEEEEEEECCTTS-H------HHHHHHHHHHH---HTT---------
T ss_pred -----------------hHHHHHHHHHHhCCCCcEEEEEeccCCCC-H------HHHHHHHHHHH---hcC---------
Confidence 01122333367899999999998776521 1 01222322222 223
Q ss_pred CCcCcccCCHHHHHHHHhhCCceEEEEEEEEe-eccccc
Q 018892 238 FNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE-VNWNAY 275 (349)
Q Consensus 238 fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~~-~~w~~~ 275 (349)
.|+.++|.+|+.+.++ | |++..--... ..|.+.
T Consensus 222 --~p~~~rs~~ei~~~f~--G-lelvePG~v~~~~Wrp~ 255 (277)
T 3giw_A 222 --MPMRLRTHAEAEEFFE--G-LELVEPGIVQVHKWHPD 255 (277)
T ss_dssp --CCCCCCCHHHHHHTTT--T-SEECTTCSEEGGGSSCC
T ss_pred --CCCccCCHHHHHHHhC--C-CcccCCcEeecccccCC
Confidence 4889999999999995 6 8865543333 337653
No 87
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.62 E-value=0.00049 Score=61.00 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=35.2
Q ss_pred CCceeEEEec-ccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 125 RNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 125 ~~Svh~~~Ss-~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
++++|+++|+ .++||+.. ..|+..+|+.=.+-|+|||++++.....+
T Consensus 98 ~~~~D~v~~~~~~~~~~~~------------------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKT------------------------------TEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp SSCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CCCCcEEEEcCchHhhcCC------------------------------HHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 6789999954 49999752 12456677777889999999999865443
No 88
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.61 E-value=0.0002 Score=62.96 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=49.7
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+|++++|+++++.++|| . .| ..+|+.=++-|+|||++++.-....
T Consensus 111 ~~~~~fD~v~~~~~l~~-~-~~--------------------------------~~~l~~~~~~L~~gG~l~i~~~~~~- 155 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLMG-T-NI--------------------------------RDFLEEANRVLKPGGLLKVAEVSSR- 155 (215)
T ss_dssp CCTTCEEEEEEESCCCS-S-CH--------------------------------HHHHHHHHHHEEEEEEEEEEECGGG-
T ss_pred CCCCCEeEEEEehhccc-c-CH--------------------------------HHHHHHHHHhCCCCeEEEEEEcCCC-
Confidence 67899999999999996 1 11 1233444677999999998743210
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEE
Q 018892 203 QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 203 ~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~ 267 (349)
+++.+++.+.+++.| |++.+...
T Consensus 156 -----------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 156 -----------------------------------------FEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp -----------------------------------------CSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred -----------------------------------------CCCHHHHHHHHHHCC-CEEEEEec
Confidence 128999999999998 98877543
No 89
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.53 E-value=0.00057 Score=60.07 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=38.1
Q ss_pred CCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 115 PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 115 pgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
.+.+..--+|++++|+++++.++|+... .|...+|+.=.+-|+|||+++
T Consensus 91 ~~d~~~~~~~~~~~D~v~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~L~~gG~l~ 139 (227)
T 1ve3_A 91 VGDARKLSFEDKTFDYVIFIDSIVHFEP-------------------------------LELNQVFKEVRRVLKPSGKFI 139 (227)
T ss_dssp ECCTTSCCSCTTCEEEEEEESCGGGCCH-------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred ECchhcCCCCCCcEEEEEEcCchHhCCH-------------------------------HHHHHHHHHHHHHcCCCcEEE
Confidence 3444443467889999999998554321 133456666678899999999
Q ss_pred EEeccc
Q 018892 195 LTFLGR 200 (349)
Q Consensus 195 l~~~g~ 200 (349)
+.....
T Consensus 140 ~~~~~~ 145 (227)
T 1ve3_A 140 MYFTDL 145 (227)
T ss_dssp EEEECH
T ss_pred EEecCh
Confidence 987653
No 90
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.51 E-value=0.00045 Score=66.19 Aligned_cols=149 Identities=16% Similarity=0.247 Sum_probs=88.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
+.-+|+|+||++|..+..+.+ . .|..+++.-|+| . ..... ... .+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~--~---~~~~a------------~~~---~~ 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHE--------I-------FPHLKCTVFDQP--Q---VVGNL------------TGN---EN 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------H-------CTTSEEEEEECH--H---HHSSC------------CCC---SS
T ss_pred CCCEEEEECCCcCHHHHHHHH--------H-------CCCCeEEEeccH--H---HHhhc------------ccC---CC
Confidence 346999999999987664432 2 134667777864 1 11111 111 23
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+.|+|+. -+| +.|+++++..||+++. .+...+|+.=.+-|+
T Consensus 238 --v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-------------------------------~~~~~~l~~~~~~L~ 281 (358)
T 1zg3_A 238 --LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-------------------------------EQSLKILKNSKEAIS 281 (358)
T ss_dssp --EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHTG
T ss_pred --cEEEeCccCC-CCC--CceEEEEcccccCCCH-------------------------------HHHHHHHHHHHHhCC
Confidence 4456788887 456 4999999999998652 122345555578899
Q ss_pred c---CceEEEEecccCCCCCCC--hhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEE
Q 018892 189 A---EGRMVLTFLGRKSQDPSS--KECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 263 (349)
Q Consensus 189 ~---GG~mvl~~~g~~~~~~~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~ 263 (349)
| ||++++.-...++..... ......+++. -|+..| -..++.+|+++++++.| |++.
T Consensus 282 p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~-----~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~ 342 (358)
T 1zg3_A 282 HKGKDGKVIIIDISIDETSDDRGLTELQLDYDLV-----MLTMFL-------------GKERTKQEWEKLIYDAG-FSSY 342 (358)
T ss_dssp GGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHH-----HHHHHS-------------CCCEEHHHHHHHHHHTT-CCEE
T ss_pred CCCCCcEEEEEEeccCCCCccchhhhHHHhhCHH-----HhccCC-------------CCCCCHHHHHHHHHHcC-CCee
Confidence 9 999988754443321100 0001111111 111111 12469999999999999 8877
Q ss_pred EEEE
Q 018892 264 HLEV 267 (349)
Q Consensus 264 ~~e~ 267 (349)
++..
T Consensus 343 ~~~~ 346 (358)
T 1zg3_A 343 KITP 346 (358)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7644
No 91
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.51 E-value=0.00023 Score=60.76 Aligned_cols=72 Identities=11% Similarity=0.053 Sum_probs=51.0
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccCC
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~ 202 (349)
+|++++|+++|+.++||+...+ ..+|+.=++-|||||++++.-.....
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~~--------------------------------~~~l~~~~r~LkpgG~l~~~~~~~~~ 106 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLHS--------------------------------AEILAEIARILRPGGCLFLKEPVETA 106 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCCC--------------------------------HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred CCCCCEeEEEECChhhhcccCH--------------------------------HHHHHHHHHHCCCCEEEEEEcccccc
Confidence 4789999999999999983111 12344447789999999995321110
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEE
Q 018892 203 QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 263 (349)
Q Consensus 203 ~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~ 263 (349)
. + .+.|.++.+|+...+++.| | |+
T Consensus 107 ~------------------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 107 V------------------------D-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp S------------------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred c------------------------c-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 0 0 0667788999999999998 7 66
No 92
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.43 E-value=0.0014 Score=62.67 Aligned_cols=150 Identities=19% Similarity=0.288 Sum_probs=88.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
+.-+|.|+||++|..+..+. +. .|..+++.-|+| ...... ++. .+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~-----~~~~~a------------~~~---~~ 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ET-------FPKLKCIVFDRP-----QVVENL------------SGS---NN 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEECH-----HHHTTC------------CCB---TT
T ss_pred cCceEEEeCCCccHHHHHHH--------HH-------CCCCeEEEeeCH-----HHHhhc------------ccC---CC
Confidence 45799999999997655433 22 145778888864 111111 111 23
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+.|.|+. -+|+ +|+++++.+||.++. .+...+|+.=.+-|+
T Consensus 233 --v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d-------------------------------~~~~~~l~~~~~~L~ 276 (352)
T 1fp2_A 233 --LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD-------------------------------KDCLRILKKCKEAVT 276 (352)
T ss_dssp --EEEEECCTTT-CCCC--CSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHHS
T ss_pred --cEEEeccccC-CCCC--ccEEEeehhhccCCH-------------------------------HHHHHHHHHHHHhCC
Confidence 4446788887 4564 999999999996442 122345555567899
Q ss_pred c---CceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEE
Q 018892 189 A---EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 265 (349)
Q Consensus 189 ~---GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~ 265 (349)
| ||++++.-...++... .. .... ...+.++.. +. ++ -..++.+|+++++++.| |++.+.
T Consensus 277 p~~~gG~l~i~e~~~~~~~~-~~---~~~~--~~~~~d~~~--------~~-~~--g~~~t~~e~~~ll~~aG-f~~~~~ 338 (352)
T 1fp2_A 277 NDGKRGKVTIIDMVIDKKKD-EN---QVTQ--IKLLMDVNM--------AC-LN--GKERNEEEWKKLFIEAG-FQHYKI 338 (352)
T ss_dssp GGGCCCEEEEEECEECTTTS-CH---HHHH--HHHHHHHHG--------GG-GT--CCCEEHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCcEEEEEEeecCCCCC-cc---chhh--hHhhccHHH--------Hh-cc--CCCCCHHHHHHHHHHCC-CCeeEE
Confidence 9 9999888655443211 10 0011 111222210 00 11 23468999999999999 887766
Q ss_pred EE
Q 018892 266 EV 267 (349)
Q Consensus 266 e~ 267 (349)
..
T Consensus 339 ~~ 340 (352)
T 1fp2_A 339 SP 340 (352)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 93
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.42 E-value=0.00024 Score=65.45 Aligned_cols=52 Identities=15% Similarity=0.134 Sum_probs=40.7
Q ss_pred ccCCCceeEEEec-ccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 122 LFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 122 lfP~~Svh~~~Ss-~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
++|++++|+++++ .++|++...+.. ..++..+|+.=++-|+|||++++....
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~--------------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGD--------------------------QSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSS--------------------------SHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCeEEEEEcChHHhhcCccccC--------------------------HHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3899999999999 899998753321 135566777778999999999998753
No 94
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.38 E-value=0.00031 Score=61.62 Aligned_cols=107 Identities=11% Similarity=0.066 Sum_probs=64.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
...-+|.|+||++|..+..+... + .+|+.-|.-.. .+. ....... .. .
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~------------~-----~~v~~vD~s~~-------~~~----~a~~~~~-~~---~ 97 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH------------C-----KRLTVIDVMPR-------AIG----RACQRTK-RW---S 97 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG------------E-----EEEEEEESCHH-------HHH----HHHHHTT-TC---S
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc------------C-----CEEEEEECCHH-------HHH----HHHHhcc-cC---C
Confidence 35689999999999887654321 1 35666664211 011 1111111 11 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
++- .+-+.+..-. |++++|+++++.++||+.. | .++..+|+.=++-|
T Consensus 98 ~~~--~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~~L 144 (216)
T 3ofk_A 98 HIS--WAATDILQFS-TAELFDLIVVAEVLYYLED-M-----------------------------TQMRTAIDNMVKML 144 (216)
T ss_dssp SEE--EEECCTTTCC-CSCCEEEEEEESCGGGSSS-H-----------------------------HHHHHHHHHHHHTE
T ss_pred CeE--EEEcchhhCC-CCCCccEEEEccHHHhCCC-H-----------------------------HHHHHHHHHHHHHc
Confidence 221 2234444333 8899999999999999763 1 23445666678899
Q ss_pred ccCceEEEEecc
Q 018892 188 VAEGRMVLTFLG 199 (349)
Q Consensus 188 ~~GG~mvl~~~g 199 (349)
+|||++++....
T Consensus 145 ~pgG~l~~~~~~ 156 (216)
T 3ofk_A 145 APGGHLVFGSAR 156 (216)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCCEEEEEecC
Confidence 999999997753
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.31 E-value=0.0035 Score=55.17 Aligned_cols=167 Identities=13% Similarity=0.132 Sum_probs=85.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|+|+||++|..++.+... .|..+|+.-|.-..=-.. . ...... .|- .++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~---------------~p~~~v~gvD~s~~~l~~----a---~~~~~~-~~~-----~~v 93 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQ---------------NPDINYIGIDIQKSVLSY----A---LDKVLE-VGV-----PNI 93 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHH---------------CTTSEEEEEESCHHHHHH----H---HHHHHH-HCC-----SSE
T ss_pred CCeEEEEccCcCHHHHHHHHH---------------CCCCCEEEEEcCHHHHHH----H---HHHHHH-cCC-----CCE
Confidence 468999999999887754321 135677877753211111 1 111111 121 232
Q ss_pred -EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 110 -FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 110 -f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
|+.+-... ..+.+|++++|++++++..+|..+--. +.. -+...||+.=++-|+
T Consensus 94 ~~~~~d~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~-----~~~--------------------~~~~~~l~~~~~~Lk 147 (214)
T 1yzh_A 94 KLLWVDGSD-LTDYFEDGEIDRLYLNFSDPWPKKRHE-----KRR--------------------LTYKTFLDTFKRILP 147 (214)
T ss_dssp EEEECCSSC-GGGTSCTTCCSEEEEESCCCCCSGGGG-----GGS--------------------TTSHHHHHHHHHHSC
T ss_pred EEEeCCHHH-HHhhcCCCCCCEEEEECCCCccccchh-----hhc--------------------cCCHHHHHHHHHHcC
Confidence 32222222 334588999999999987777442100 000 012345555567799
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchh-hhccCCcCcccCCHHHHHHHHhhCCceEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEE-KVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 265 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e-~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~ 265 (349)
|||.+++..... +....++..+.+.|.-..+ ..|-...+.......+++.-..+.| +.|-++
T Consensus 148 pgG~l~~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~ 210 (214)
T 1yzh_A 148 ENGEIHFKTDNR--------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRV 210 (214)
T ss_dssp TTCEEEEEESCH--------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEE
T ss_pred CCcEEEEEeCCH--------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEE
Confidence 999998865211 1123333334444642211 1122222223333456777777777 555444
No 96
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.21 E-value=0.0013 Score=59.74 Aligned_cols=155 Identities=17% Similarity=0.271 Sum_probs=83.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... + .+|+.-|.- .-. + +..+. ... .+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~------------~-----~~v~gvD~s-----~~~--l----~~a~~-~~~-----~~ 99 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER------------G-----FEVVLVDPS-----KEM--L----EVARE-KGV-----KN 99 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT------------T-----CEEEEEESC-----HHH--H----HHHHH-HTC-----SC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc------------C-----CeEEEEeCC-----HHH--H----HHHHh-hcC-----CC
Confidence 4579999999999987644221 1 356666632 111 0 11111 111 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecc-cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~-alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
|.. +.+..--+|++++|+++++. .+||... | ..+|+.=.+-|
T Consensus 100 -~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~--------------------------------~~~l~~~~~~L 142 (260)
T 2avn_A 100 -VVE---AKAEDLPFPSGAFEAVLALGDVLSYVEN-K--------------------------------DKAFSEIRRVL 142 (260)
T ss_dssp -EEE---CCTTSCCSCTTCEEEEEECSSHHHHCSC-H--------------------------------HHHHHHHHHHE
T ss_pred -EEE---CcHHHCCCCCCCEEEEEEcchhhhcccc-H--------------------------------HHHHHHHHHHc
Confidence 332 33333347889999999976 5677442 1 23344457789
Q ss_pred ccCceEEEEecccCCCCCCChhhhHHHHHHH----HHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEE
Q 018892 188 VAEGRMVLTFLGRKSQDPSSKECCYIWELLA----TALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 263 (349)
Q Consensus 188 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~----~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~ 263 (349)
+|||++++...+.... ..+.+. ..+......|...... ....++.++.+++|+++. .| |++.
T Consensus 143 kpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~ 208 (260)
T 2avn_A 143 VPDGLLIATVDNFYTF---------LQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETV 208 (260)
T ss_dssp EEEEEEEEEEEBHHHH---------HHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEE
T ss_pred CCCeEEEEEeCChHHH---------HHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEE
Confidence 9999999998664310 001000 1112223334332110 011122346789999888 77 9988
Q ss_pred EEEEE
Q 018892 264 HLEVS 268 (349)
Q Consensus 264 ~~e~~ 268 (349)
+....
T Consensus 209 ~~~~~ 213 (260)
T 2avn_A 209 DIRGI 213 (260)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 77655
No 97
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.18 E-value=0.001 Score=58.00 Aligned_cols=130 Identities=15% Similarity=0.187 Sum_probs=75.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+. +. +.-+|+.-|.-.. .+......... .+. .+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~~-------~~~~a~~~~~~-~~~-----~~ 110 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDISDE-------SMTAAEENAAL-NGI-----YD 110 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHHH-TTC-----CC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCHH-------HHHHHHHHHHH-cCC-----Cc
Confidence 35699999999998766532 11 1236666664211 11111111111 111 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+.+.+.. ++++++|+++++..+||+. .+|+.=.+-|+
T Consensus 111 --v~~~~~d~~~--~~~~~fD~i~~~~~~~~~~------------------------------------~~l~~~~~~L~ 150 (205)
T 3grz_A 111 --IALQKTSLLA--DVDGKFDLIVANILAEILL------------------------------------DLIPQLDSHLN 150 (205)
T ss_dssp --CEEEESSTTT--TCCSCEEEEEEESCHHHHH------------------------------------HHGGGSGGGEE
T ss_pred --eEEEeccccc--cCCCCceEEEECCcHHHHH------------------------------------HHHHHHHHhcC
Confidence 2233445544 3568999999987776642 23333367899
Q ss_pred cCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhhCCceEEEEEEEE
Q 018892 189 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 189 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~~GsF~i~~~e~~ 268 (349)
|||++++...... +.+++...+++.| |++.+....
T Consensus 151 ~gG~l~~~~~~~~--------------------------------------------~~~~~~~~~~~~G-f~~~~~~~~ 185 (205)
T 3grz_A 151 EDGQVIFSGIDYL--------------------------------------------QLPKIEQALAENS-FQIDLKMRA 185 (205)
T ss_dssp EEEEEEEEEEEGG--------------------------------------------GHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCCEEEEEecCcc--------------------------------------------cHHHHHHHHHHcC-CceEEeecc
Confidence 9999998643221 4778888888888 888776543
Q ss_pred eeccc
Q 018892 269 EVNWN 273 (349)
Q Consensus 269 ~~~w~ 273 (349)
..|.
T Consensus 186 -~~w~ 189 (205)
T 3grz_A 186 -GRWI 189 (205)
T ss_dssp -TTEE
T ss_pred -CCEE
Confidence 3344
No 98
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.16 E-value=0.0007 Score=61.55 Aligned_cols=162 Identities=19% Similarity=0.172 Sum_probs=85.9
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhH
Q 018892 13 PITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ 92 (349)
Q Consensus 13 ~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~ 92 (349)
..|++++..+.. .+..-+|.|+||++|..|..+.+. + + -+|+--|+-.+=-..--+..+..
T Consensus 23 ~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~------------g---~-~~V~gvDis~~ml~~a~~~~~~~- 83 (232)
T 3opn_A 23 LKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN------------G---A-KLVYALDVGTNQLAWKIRSDERV- 83 (232)
T ss_dssp HHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT------------T---C-SEEEEECSSCCCCCHHHHTCTTE-
T ss_pred HHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc------------C---C-CEEEEEcCCHHHHHHHHHhCccc-
Confidence 356777776643 234568999999999987655421 1 1 36777776554222100000000
Q ss_pred HHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHH
Q 018892 93 KILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQF 172 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~ 172 (349)
...+. .++ ....++.+...+++..++|++|++. +
T Consensus 84 ----~~~~~-----~~~-~~~~~~~~~~~~~d~~~~D~v~~~l--------~---------------------------- 117 (232)
T 3opn_A 84 ----VVMEQ-----FNF-RNAVLADFEQGRPSFTSIDVSFISL--------D---------------------------- 117 (232)
T ss_dssp ----EEECS-----CCG-GGCCGGGCCSCCCSEEEECCSSSCG--------G----------------------------
T ss_pred ----ccccc-----ceE-EEeCHhHcCcCCCCEEEEEEEhhhH--------H----------------------------
Confidence 00000 011 1112344444455666777766542 1
Q ss_pred HHHHHHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHH
Q 018892 173 QRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKS 252 (349)
Q Consensus 173 ~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~ 252 (349)
.+|..=.+-|+|||++++.+ .+ .++ ..+..+-..|.+.... .+..+.+|+.+
T Consensus 118 -----~~l~~i~rvLkpgG~lv~~~--~p-----------~~e---~~~~~~~~~G~~~d~~-------~~~~~~~~l~~ 169 (232)
T 3opn_A 118 -----LILPPLYEILEKNGEVAALI--KP-----------QFE---AGREQVGKNGIIRDPK-------VHQMTIEKVLK 169 (232)
T ss_dssp -----GTHHHHHHHSCTTCEEEEEE--CH-----------HHH---SCHHHHC-CCCCCCHH-------HHHHHHHHHHH
T ss_pred -----HHHHHHHHhccCCCEEEEEE--Cc-----------ccc---cCHHHhCcCCeecCcc-------hhHHHHHHHHH
Confidence 12233367899999999965 11 111 1222222335443221 23348999999
Q ss_pred HHhhCCceEEEEEEEE
Q 018892 253 EVIKEGSFTIDHLEVS 268 (349)
Q Consensus 253 ~ie~~GsF~i~~~e~~ 268 (349)
.+++.| |++..++..
T Consensus 170 ~l~~aG-f~v~~~~~~ 184 (232)
T 3opn_A 170 TATQLG-FSVKGLTFS 184 (232)
T ss_dssp HHHHHT-EEEEEEEEC
T ss_pred HHHHCC-CEEEEEEEc
Confidence 999999 999887654
No 99
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.12 E-value=0.00054 Score=63.93 Aligned_cols=48 Identities=10% Similarity=0.080 Sum_probs=36.7
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEe
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 197 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~ 197 (349)
++++++|+++|...+||+.- ..-..++..+|+.=++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl---------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL---------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH---------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh---------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 57889999999999999631 0012456677777788999999999864
No 100
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.06 E-value=0.0032 Score=55.80 Aligned_cols=53 Identities=15% Similarity=0.246 Sum_probs=37.3
Q ss_pred CcccccccCCCceeEEEecc-cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 116 GSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 116 gSFy~rlfP~~Svh~~~Ss~-alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
+.+..--+| +++|+++++. ++||+.. ..|...+|+.=.+-|+|||+++
T Consensus 86 ~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------~~~~~~~l~~~~~~L~pgG~l~ 134 (243)
T 3d2l_A 86 QDMRELELP-EPVDAITILCDSLNYLQT------------------------------EADVKQTFDSAARLLTDGGKLL 134 (243)
T ss_dssp CCGGGCCCS-SCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred cChhhcCCC-CCcCEEEEeCCchhhcCC------------------------------HHHHHHHHHHHHHhcCCCeEEE
Confidence 344333344 8899999987 9999742 1244556666678899999999
Q ss_pred EEecc
Q 018892 195 LTFLG 199 (349)
Q Consensus 195 l~~~g 199 (349)
+.+..
T Consensus 135 ~~~~~ 139 (243)
T 3d2l_A 135 FDVHS 139 (243)
T ss_dssp EEEEC
T ss_pred EEcCC
Confidence 97754
No 101
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.05 E-value=0.0033 Score=53.26 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=38.5
Q ss_pred CCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 115 PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 115 pgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
.+.+.. .+|++++|+++++..+||- ..++..+|+.=.+-|+|||+++
T Consensus 108 ~~d~~~-~~~~~~~D~v~~~~~~~~~--------------------------------~~~~~~~l~~~~~~L~~gG~l~ 154 (194)
T 1dus_A 108 HSDLYE-NVKDRKYNKIITNPPIRAG--------------------------------KEVLHRIIEEGKELLKDNGEIW 154 (194)
T ss_dssp ECSTTT-TCTTSCEEEEEECCCSTTC--------------------------------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred ECchhc-ccccCCceEEEECCCcccc--------------------------------hhHHHHHHHHHHHHcCCCCEEE
Confidence 345544 4567899999998888761 1244566667788899999999
Q ss_pred EEeccc
Q 018892 195 LTFLGR 200 (349)
Q Consensus 195 l~~~g~ 200 (349)
+.....
T Consensus 155 ~~~~~~ 160 (194)
T 1dus_A 155 VVIQTK 160 (194)
T ss_dssp EEEEST
T ss_pred EEECCC
Confidence 998654
No 102
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.01 E-value=0.0022 Score=62.65 Aligned_cols=108 Identities=18% Similarity=0.134 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|+|+||++|..++.+... + .+|+..|.- -..+ ..-...... .+. +
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~------------g-----~~V~gvDis---~~al----~~A~~n~~~-~~~------~ 281 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM------------G-----AEVVGVEDD---LASV----LSLQKGLEA-NAL------K 281 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT------------T-----CEEEEEESB---HHHH----HHHHHHHHH-TTC------C
T ss_pred CCCEEEEEeeeCCHHHHHHHHc------------C-----CEEEEEECC---HHHH----HHHHHHHHH-cCC------C
Confidence 3569999999999998866431 1 366666641 1111 111111111 111 1
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+-+.+..-+.+++++|+++|+..+||..... ..+...||+.=.+-|+
T Consensus 282 --v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~----------------------------~~~~~~~l~~~~~~Lk 331 (381)
T 3dmg_A 282 --AQALHSDVDEALTEEARFDIIVTNPPFHVGGAVI----------------------------LDVAQAFVNVAAARLR 331 (381)
T ss_dssp --CEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSC----------------------------CHHHHHHHHHHHHHEE
T ss_pred --eEEEEcchhhccccCCCeEEEEECCchhhccccc----------------------------HHHHHHHHHHHHHhcC
Confidence 2224466777677779999999999999854322 1245567777788899
Q ss_pred cCceEEEEe
Q 018892 189 AEGRMVLTF 197 (349)
Q Consensus 189 ~GG~mvl~~ 197 (349)
|||++++..
T Consensus 332 pGG~l~iv~ 340 (381)
T 3dmg_A 332 PGGVFFLVS 340 (381)
T ss_dssp EEEEEEEEE
T ss_pred cCcEEEEEE
Confidence 999999986
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.92 E-value=0.0034 Score=57.44 Aligned_cols=108 Identities=13% Similarity=0.074 Sum_probs=64.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
.--+|+|+||++|..+..+...+ | |+=.||--|.- . .....+..... +. .+
T Consensus 77 pG~~VldlG~G~G~~~~~la~~V-----------G---~~G~V~avD~s-----~------~~~~~l~~~a~-~~---~n 127 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDII-----------G---PRGRIYGVEFA-----P------RVMRDLLTVVR-DR---RN 127 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------C---TTCEEEEEECC-----H------HHHHHHHHHST-TC---TT
T ss_pred CCCEEEEecCcCCHHHHHHHHHh-----------C---CCceEEEEeCC-----H------HHHHHHHHhhH-hh---cC
Confidence 34799999999999877544322 2 33455555532 1 11111212111 11 23
Q ss_pred -eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 109 -CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 109 -~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
..+.+..+....--++.+++|++|+..+.||-. ..++..=.+-|
T Consensus 128 i~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~~-----------------------------------~~~l~~~~r~L 172 (233)
T 4df3_A 128 IFPILGDARFPEKYRHLVEGVDGLYADVAQPEQA-----------------------------------AIVVRNARFFL 172 (233)
T ss_dssp EEEEESCTTCGGGGTTTCCCEEEEEECCCCTTHH-----------------------------------HHHHHHHHHHE
T ss_pred eeEEEEeccCccccccccceEEEEEEeccCChhH-----------------------------------HHHHHHHHHhc
Confidence 566677777666667888999998766555411 12333445679
Q ss_pred ccCceEEEEeccc
Q 018892 188 VAEGRMVLTFLGR 200 (349)
Q Consensus 188 ~~GG~mvl~~~g~ 200 (349)
||||++++.+-.+
T Consensus 173 KpGG~lvI~ik~r 185 (233)
T 4df3_A 173 RDGGYMLMAIKAR 185 (233)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCCCEEEEEEecc
Confidence 9999999987444
No 104
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.79 E-value=0.0065 Score=54.34 Aligned_cols=120 Identities=19% Similarity=0.290 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhh
Q 018892 12 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 91 (349)
Q Consensus 12 ~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~ 91 (349)
..++++.+.... .+..-+|.|+||++|..++.+... + .+|+.-|+-.. . +...
T Consensus 27 ~~~~~~~~~~~~---~~~~~~vLDlGcG~G~~~~~l~~~------------~-----~~v~gvD~s~~-----~--l~~a 79 (252)
T 1wzn_A 27 IDFVEEIFKEDA---KREVRRVLDLACGTGIPTLELAER------------G-----YEVVGLDLHEE-----M--LRVA 79 (252)
T ss_dssp HHHHHHHHHHTC---SSCCCEEEEETCTTCHHHHHHHHT------------T-----CEEEEEESCHH-----H--HHHH
T ss_pred HHHHHHHHHHhc---ccCCCEEEEeCCCCCHHHHHHHHC------------C-----CeEEEEECCHH-----H--HHHH
Confidence 344444444332 234569999999999987755321 1 35666664211 1 1111
Q ss_pred HHHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecc-cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHH
Q 018892 92 QKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYE 170 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~-alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~ 170 (349)
...... .+. +--| +.+.+..--+ ++++|++++.. ++|+++
T Consensus 80 ~~~~~~-~~~-----~v~~---~~~d~~~~~~-~~~fD~v~~~~~~~~~~~----------------------------- 120 (252)
T 1wzn_A 80 RRKAKE-RNL-----KIEF---LQGDVLEIAF-KNEFDAVTMFFSTIMYFD----------------------------- 120 (252)
T ss_dssp HHHHHH-TTC-----CCEE---EESCGGGCCC-CSCEEEEEECSSGGGGSC-----------------------------
T ss_pred HHHHHh-cCC-----ceEE---EECChhhccc-CCCccEEEEcCCchhcCC-----------------------------
Confidence 111111 111 1122 3344444223 47899999864 445532
Q ss_pred HHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 171 QFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 171 Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
..|...+|+.=++-|+|||++++.+..
T Consensus 121 --~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 121 --EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp --HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 124556666667889999999998754
No 105
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.76 E-value=0.0094 Score=51.47 Aligned_cols=62 Identities=18% Similarity=0.056 Sum_probs=42.6
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecccC
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 201 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~ 201 (349)
-+|++++|+++++.++|.+.... .... . ... ....|...+|+.=.+-|+|||++++...+.+
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~-~~~~------~---~~~--------~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGE-RDPW------T---VSS--------EGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTC-SCTT------S---CCH--------HHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CCCCCcccEEEECcchhhhcccc-cccc------c---ccc--------chhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 47889999999999998775211 1100 0 011 1245677888888889999999999886653
No 106
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.76 E-value=0.0023 Score=54.71 Aligned_cols=28 Identities=7% Similarity=-0.107 Sum_probs=21.8
Q ss_pred CCcccccccCCCceeEEEecccccccccC
Q 018892 115 PGSFYGRLFPRNSVHLFHSSYSLQWLSQV 143 (349)
Q Consensus 115 pgSFy~rlfP~~Svh~~~Ss~alHWLS~~ 143 (349)
-+.+.. .+|++++|+++|+..+||.+..
T Consensus 67 ~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 67 RADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp ECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred ECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 345555 4667999999999999998754
No 107
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.75 E-value=0.0041 Score=59.67 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.+. +.-+|+.-|.. ..-...+.. ... .|-. +++
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~----------------g~~~v~gvD~s--~~l~~a~~~------~~~-~~~~----~~v 117 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA----------------GARKVIGIECS--SISDYAVKI------VKA-NKLD----HVV 117 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT----------------TCSEEEEEECS--THHHHHHHH------HHH-TTCT----TTE
T ss_pred CCEEEEEeccchHHHHHHHHC----------------CCCEEEEECcH--HHHHHHHHH------HHH-cCCC----CcE
Confidence 468999999999887755421 22578888875 232222211 111 1210 112
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
..+-|+...--+|++++|+++|....+++...+ ++..+|+.+.+-|+|
T Consensus 118 --~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~------------------------------~~~~~l~~~~r~Lkp 165 (349)
T 3q7e_A 118 --TIIKGKVEEVELPVEKVDIIISEWMGYCLFYES------------------------------MLNTVLHARDKWLAP 165 (349)
T ss_dssp --EEEESCTTTCCCSSSCEEEEEECCCBBTBTBTC------------------------------CHHHHHHHHHHHEEE
T ss_pred --EEEECcHHHccCCCCceEEEEEccccccccCch------------------------------hHHHHHHHHHHhCCC
Confidence 223355555468899999999987666654311 344678888999999
Q ss_pred CceEEE
Q 018892 190 EGRMVL 195 (349)
Q Consensus 190 GG~mvl 195 (349)
||+|+.
T Consensus 166 gG~li~ 171 (349)
T 3q7e_A 166 DGLIFP 171 (349)
T ss_dssp EEEEES
T ss_pred CCEEcc
Confidence 999973
No 108
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.71 E-value=0.0059 Score=52.67 Aligned_cols=55 Identities=4% Similarity=-0.001 Sum_probs=35.5
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
+|++++|+++|..++||... + ....+. ..+....+|+.=.+-|+|||+|++.+..
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~-~-------------------~~d~~~--~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN-K-------------------IDDHLN--SCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC-H-------------------HHHHHH--HHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCcccEEEeCCCcCCCCC-c-------------------ccCHHH--HHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 68889999999999998531 0 000110 1122334555557789999999997654
No 109
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.71 E-value=0.0031 Score=59.56 Aligned_cols=158 Identities=18% Similarity=0.160 Sum_probs=87.2
Q ss_pred HHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHH
Q 018892 14 ITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQK 93 (349)
Q Consensus 14 ~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~ 93 (349)
.|++++..+.. ....-+|+|+||++|..|..+.+. | .-+|+--|+-.+=-..
T Consensus 72 Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~------------g----a~~V~aVDvs~~mL~~---------- 123 (291)
T 3hp7_A 72 KLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN------------G----AKLVYAVDVGTNQLVW---------- 123 (291)
T ss_dssp HHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT------------T----CSEEEEECSSSSCSCH----------
T ss_pred HHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC------------C----CCEEEEEECCHHHHHH----------
Confidence 46677765532 234468999999999998755321 1 2467777765542111
Q ss_pred HHHHhhCCCCCCCCceEEeecC--CcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHH
Q 018892 94 ILRKQLGSASGAAGQCFFTGVP--GSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ 171 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~~f~~~vp--gSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q 171 (349)
.+.++ ..+-..... ...-..-+|..++|++.+..++|||.++-
T Consensus 124 a~r~~--------~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~vL--------------------------- 168 (291)
T 3hp7_A 124 KLRQD--------DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISLNLIL--------------------------- 168 (291)
T ss_dssp HHHTC--------TTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCGGGTH---------------------------
T ss_pred HHHhC--------cccceecccCceecchhhCCCCCCCEEEEEeeHhhHHHHH---------------------------
Confidence 01110 111111000 00001235777899999999999874321
Q ss_pred HHHHHHHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHH-hcCCcchhhhccCCcCcccCCHHHH
Q 018892 172 FQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMV-SEGLIEEEKVNCFNIPQYTPSPAEI 250 (349)
Q Consensus 172 ~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d~fn~P~y~~s~~E~ 250 (349)
..=++-|+|||++++.+--.-+..+ + -+ ..|.+.... .+..+.+++
T Consensus 169 ---------~e~~rvLkpGG~lv~lvkPqfe~~~---~--------------~~~~~G~vrd~~-------~~~~~~~~v 215 (291)
T 3hp7_A 169 ---------PALAKILVDGGQVVALVKPQFEAGR---E--------------QIGKNGIVRESS-------IHEKVLETV 215 (291)
T ss_dssp ---------HHHHHHSCTTCEEEEEECGGGTSCG---G--------------GCC-CCCCCCHH-------HHHHHHHHH
T ss_pred ---------HHHHHHcCcCCEEEEEECcccccCh---h--------------hcCCCCccCCHH-------HHHHHHHHH
Confidence 1126789999999997511111000 0 00 124332221 244578899
Q ss_pred HHHHhhCCceEEEEEEEE
Q 018892 251 KSEVIKEGSFTIDHLEVS 268 (349)
Q Consensus 251 ~~~ie~~GsF~i~~~e~~ 268 (349)
.+.++..| |.+..+..-
T Consensus 216 ~~~~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 216 TAFAVDYG-FSVKGLDFS 232 (291)
T ss_dssp HHHHHHTT-EEEEEEEEC
T ss_pred HHHHHHCC-CEEEEEEEC
Confidence 99999998 998877543
No 110
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.69 E-value=0.0034 Score=54.69 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+... + .+|+.-|.-. ...+... ..... .+ . .+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~------------~-----~~v~~vD~~~----~~~~~a~---~~~~~-~~--~---~~ 126 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL------------V-----QHVCSVERIK----GLQWQAR---RRLKN-LD--L---HN 126 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH------------S-----SEEEEEESCH----HHHHHHH---HHHHH-TT--C---CS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh------------C-----CEEEEEecCH----HHHHHHH---HHHHH-cC--C---Cc
Confidence 4579999999999988765432 1 3455555321 1111111 11111 11 1 22
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+..+-+....-+.+.+++|+++++.++||+.+ ++ .+-|+
T Consensus 127 --v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~--------------------~~-------------------~~~L~ 165 (210)
T 3lbf_A 127 --VSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT--------------------AL-------------------MTQLD 165 (210)
T ss_dssp --EEEEESCGGGCCGGGCCEEEEEESSBCSSCCT--------------------HH-------------------HHTEE
T ss_pred --eEEEECCcccCCccCCCccEEEEccchhhhhH--------------------HH-------------------HHhcc
Confidence 22344666666677889999999999988542 11 46799
Q ss_pred cCceEEEEecc
Q 018892 189 AEGRMVLTFLG 199 (349)
Q Consensus 189 ~GG~mvl~~~g 199 (349)
|||++++.+..
T Consensus 166 pgG~lv~~~~~ 176 (210)
T 3lbf_A 166 EGGILVLPVGE 176 (210)
T ss_dssp EEEEEEEEECS
T ss_pred cCcEEEEEEcC
Confidence 99999999876
No 111
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.68 E-value=0.008 Score=49.74 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=38.2
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
+|++++|+++++..+||...... ... ........+|+.=.+-|+|||++++.....
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~-----------------~~~-----~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAV-----------------DIP-----RAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHH-----------------HHH-----HHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCCCceeEEEECCCccccCCCcc-----------------chH-----HHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67889999999999999653110 000 011223566766678899999999977544
No 112
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.66 E-value=0.018 Score=48.90 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=16.5
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..|+.+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la 41 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLA 41 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 34689999999999988654
No 113
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.63 E-value=0.0095 Score=52.72 Aligned_cols=113 Identities=15% Similarity=0.156 Sum_probs=61.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+... .|..+|+--|.-.. .+-. -...... .| . .++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~---------------~p~~~v~giD~s~~---~l~~----a~~~~~~-~~--~---~nv 90 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQ---------------NPDINYIGIELFKS---VIVT----AVQKVKD-SE--A---QNV 90 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHH---------------CTTSEEEEECSCHH---HHHH----HHHHHHH-SC--C---SSE
T ss_pred CceEEEEecCCCHHHHHHHHH---------------CCCCCEEEEEechH---HHHH----HHHHHHH-cC--C---CCE
Confidence 457999999999988754321 14467777774211 1111 0011111 12 1 233
Q ss_pred EEeecCCccc--ccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 110 FFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 110 f~~~vpgSFy--~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
-+ +-+... ...||++++|.++.+++..|..+. .. +.++ ....||+.=++-|
T Consensus 91 ~~--~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~-~~----~~rl--------------------~~~~~l~~~~~~L 143 (213)
T 2fca_A 91 KL--LNIDADTLTDVFEPGEVKRVYLNFSDPWPKKR-HE----KRRL--------------------TYSHFLKKYEEVM 143 (213)
T ss_dssp EE--ECCCGGGHHHHCCTTSCCEEEEESCCCCCSGG-GG----GGST--------------------TSHHHHHHHHHHH
T ss_pred EE--EeCCHHHHHhhcCcCCcCEEEEECCCCCcCcc-cc----cccc--------------------CcHHHHHHHHHHc
Confidence 22 223332 245889999999988877775421 00 0000 0123455556789
Q ss_pred ccCceEEEEe
Q 018892 188 VAEGRMVLTF 197 (349)
Q Consensus 188 ~~GG~mvl~~ 197 (349)
+|||++++..
T Consensus 144 kpgG~l~~~t 153 (213)
T 2fca_A 144 GKGGSIHFKT 153 (213)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999999876
No 114
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.63 E-value=0.013 Score=50.90 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=57.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+... + |..+|+.-|.-.. ..+... ..... .|- .+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~------------~---~~~~v~~vD~s~~----~~~~a~---~~~~~-~~~-----~~ 91 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNL------------M---PNGRIFALERNPQ----YLGFIR---DNLKK-FVA-----RN 91 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHH------------C---TTSEEEEEECCHH----HHHHHH---HHHHH-HTC-----TT
T ss_pred CCCEEEEECCCCCHHHHHHHHH------------C---CCCEEEEEeCCHH----HHHHHH---HHHHH-hCC-----Cc
Confidence 3579999999999987754432 1 3466777774211 111111 11111 121 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+-+.+...+.+..++|++++..+++ +...+|+.=.+-|+
T Consensus 92 v--~~~~~d~~~~~~~~~~~D~i~~~~~~~------------------------------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 92 V--TLVEAFAPEGLDDLPDPDRVFIGGSGG------------------------------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp E--EEEECCTTTTCTTSCCCSEEEESCCTT------------------------------------CHHHHHHHHHHHCC
T ss_pred E--EEEeCChhhhhhcCCCCCEEEECCCCc------------------------------------CHHHHHHHHHHhcC
Confidence 2 123344544444446788888776553 12234555567799
Q ss_pred cCceEEEEec
Q 018892 189 AEGRMVLTFL 198 (349)
Q Consensus 189 ~GG~mvl~~~ 198 (349)
|||++++...
T Consensus 134 pgG~l~~~~~ 143 (204)
T 3e05_A 134 SEGVIVLNAV 143 (204)
T ss_dssp TTCEEEEEEC
T ss_pred CCeEEEEEec
Confidence 9999999763
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.63 E-value=0.0074 Score=52.94 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=25.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 78 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~ 78 (349)
..-+|.|+||++|..++.+.. . .|..+|+.-|+-.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~gvD~s~ 61 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVAR--------Q-------NPSRLVVALDADK 61 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHH--------H-------CTTEEEEEEESCG
T ss_pred CCCEEEEecCCCCHHHHHHHH--------H-------CCCCEEEEEECCH
Confidence 457999999999999876543 1 1347788888644
No 116
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.58 E-value=0.014 Score=57.97 Aligned_cols=112 Identities=19% Similarity=0.211 Sum_probs=58.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhh-HhhHHHHHHhhCCCCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSL-ASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l-~~~~~~~~~~~~~~~~~~~ 107 (349)
..-+|.|+||++|..++.+... .+ .-+|+--|+-.+ .-.+.+.. ..+.... ...|... .
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~-----------~g----~~kVvGIDiS~~-~lelAr~n~e~frkr~-~~~Gl~~---~ 232 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAA-----------TN----CKHHYGVEKADI-PAKYAETMDREFRKWM-KWYGKKH---A 232 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH-----------CC----CSEEEEEECCHH-HHHHHHHHHHHHHHHH-HHHTBCC---C
T ss_pred CCCEEEEeCCCCCHHHHHHHHH-----------CC----CCEEEEEeCCHH-HHHHHHHHHHHHHHHH-HHhCCCC---C
Confidence 3468999999999988755431 01 123555554221 11222211 1111111 1112110 1
Q ss_pred ceEEeecCCcccccccCC--CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 108 QCFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~--~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
+ +.-+-|.|..--|++ .++|+++++..++| | |...-|....+
T Consensus 233 r--Vefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~----p------------------------------dl~~aL~Ei~R 276 (438)
T 3uwp_A 233 E--YTLERGDFLSEEWRERIANTSVIFVNNFAFG----P------------------------------EVDHQLKERFA 276 (438)
T ss_dssp E--EEEEECCTTSHHHHHHHHTCSEEEECCTTCC----H------------------------------HHHHHHHHHHT
T ss_pred C--eEEEECcccCCccccccCCccEEEEcccccC----c------------------------------hHHHHHHHHHH
Confidence 2 233556776654543 46899998877665 2 11222345568
Q ss_pred hhccCceEEEE
Q 018892 186 ELVAEGRMVLT 196 (349)
Q Consensus 186 EL~~GG~mvl~ 196 (349)
.|+|||++|+.
T Consensus 277 vLKPGGrIVss 287 (438)
T 3uwp_A 277 NMKEGGRIVSS 287 (438)
T ss_dssp TSCTTCEEEES
T ss_pred cCCCCcEEEEe
Confidence 99999999876
No 117
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.57 E-value=0.013 Score=54.68 Aligned_cols=40 Identities=8% Similarity=0.083 Sum_probs=30.0
Q ss_pred CCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEE
Q 018892 125 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVL 195 (349)
Q Consensus 125 ~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 195 (349)
.+++|+++|.+.|+|+.. + . ....|+.=++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~-~-------------------~-----------~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK-T-------------------T-----------QEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH-H-------------------H-----------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH-H-------------------H-----------HHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999862 1 1 13344455788999999976
No 118
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.55 E-value=0.011 Score=52.83 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=34.9
Q ss_pred cCCccccc--ccCCCceeEEEe-cccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccC
Q 018892 114 VPGSFYGR--LFPRNSVHLFHS-SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 190 (349)
Q Consensus 114 vpgSFy~r--lfP~~Svh~~~S-s~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 190 (349)
+-|.+..- -+|++++|++++ .+++++ .. +. ..++..+|+.=.+-|+||
T Consensus 113 ~~~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~-~~---------------------------~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 113 LKGLWEDVAPTLPDGHFDGILYDTYPLSE-ET-WH---------------------------THQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EESCHHHHGGGSCTTCEEEEEECCCCCBG-GG-TT---------------------------THHHHHHHHTHHHHEEEE
T ss_pred EecCHHHhhcccCCCceEEEEECCcccch-hh-hh---------------------------hhhHHHHHHHHHHhcCCC
Confidence 33555443 478899999999 666522 21 10 123345666667889999
Q ss_pred ceEEEEe
Q 018892 191 GRMVLTF 197 (349)
Q Consensus 191 G~mvl~~ 197 (349)
|+|++.-
T Consensus 164 G~l~~~~ 170 (236)
T 1zx0_A 164 GVLTYCN 170 (236)
T ss_dssp EEEEECC
T ss_pred eEEEEEe
Confidence 9998754
No 119
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.52 E-value=0.042 Score=47.04 Aligned_cols=111 Identities=18% Similarity=0.072 Sum_probs=60.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+++ . + .-+|+.-|+-.. ..+... ..... .+- .+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~--------~----~----~~~v~~vD~~~~----~~~~a~---~~~~~-~~~-----~~ 94 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS--------R----G----AASVLFVESDQR----SAAVIA---RNIEA-LGL-----SG 94 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T----T----CSEEEEEECCHH----HHHHHH---HHHHH-HTC-----SC
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------C----C----CCeEEEEECCHH----HHHHHH---HHHHH-cCC-----Cc
Confidence 346899999999998876432 0 1 135666664221 111111 11111 111 12
Q ss_pred eEEeecCCcccccc--cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH-
Q 018892 109 CFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE- 185 (349)
Q Consensus 109 ~f~~~vpgSFy~rl--fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~- 185 (349)
+- .+-+....-+ +|++++|++++...+||.. .++..+|+.-.+
T Consensus 95 v~--~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~--------------------------------~~~~~~l~~~~~~ 140 (189)
T 3p9n_A 95 AT--LRRGAVAAVVAAGTTSPVDLVLADPPYNVDS--------------------------------ADVDAILAALGTN 140 (189)
T ss_dssp EE--EEESCHHHHHHHCCSSCCSEEEECCCTTSCH--------------------------------HHHHHHHHHHHHS
T ss_pred eE--EEEccHHHHHhhccCCCccEEEECCCCCcch--------------------------------hhHHHHHHHHHhc
Confidence 21 1223333322 4578999999987766631 133334444444
Q ss_pred -hhccCceEEEEecccCC
Q 018892 186 -ELVAEGRMVLTFLGRKS 202 (349)
Q Consensus 186 -EL~~GG~mvl~~~g~~~ 202 (349)
-|+|||++++....+..
T Consensus 141 ~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 141 GWTREGTVAVVERATTCA 158 (189)
T ss_dssp SSCCTTCEEEEEEETTSC
T ss_pred CccCCCeEEEEEecCCCC
Confidence 79999999998866543
No 120
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.48 E-value=0.025 Score=47.36 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=59.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.. ..|..+|+.-|.-..=... -.+... ..+- ..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~---------------~~~~~~v~~vD~~~~~~~~-------a~~~~~-~~~~----~~~ 77 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLR---------------STPQTTAVCFEISEERRER-------ILSNAI-NLGV----SDR 77 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHT---------------TSSSEEEEEECSCHHHHHH-------HHHHHH-TTTC----TTS
T ss_pred CCCeEEEeCCCCCHHHHHHHH---------------HCCCCeEEEEeCCHHHHHH-------HHHHHH-HhCC----CCC
Confidence 457999999999987764432 1245788888853211111 111111 1121 124
Q ss_pred eEEeecCCcccccccCC--CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 109 CFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~--~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
+++. +.... -+|. +++|+++++.++|| +. +|+.=.+-
T Consensus 78 ~~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~----~~---------------------------------~l~~~~~~ 116 (178)
T 3hm2_A 78 IAVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA----PG---------------------------------VFAAAWKR 116 (178)
T ss_dssp EEEE---CCTTG-GGGGCCSCCSEEEECC-TTC----TT---------------------------------HHHHHHHT
T ss_pred EEEe---cchHh-hhhccCCCCCEEEECCcccH----HH---------------------------------HHHHHHHh
Confidence 5433 33333 4555 89999999999988 11 12222567
Q ss_pred hccCceEEEEecc
Q 018892 187 LVAEGRMVLTFLG 199 (349)
Q Consensus 187 L~~GG~mvl~~~g 199 (349)
|+|||++++....
T Consensus 117 L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 117 LPVGGRLVANAVT 129 (178)
T ss_dssp CCTTCEEEEEECS
T ss_pred cCCCCEEEEEeec
Confidence 9999999987744
No 121
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.44 E-value=0.0066 Score=56.36 Aligned_cols=42 Identities=2% Similarity=-0.044 Sum_probs=30.4
Q ss_pred CCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEec
Q 018892 125 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 125 ~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
++++|+++|+.++||+.. .|....|+.-++-| |||++++.+.
T Consensus 108 ~~~fD~Vv~~~~l~~~~~-------------------------------~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTT-------------------------------EEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TTCCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCCccEEEEhhhhHhCCH-------------------------------HHHHHHHHHHHHhC-cCcEEEEEec
Confidence 678999999999998652 12333444445567 9999999874
No 122
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.44 E-value=0.0024 Score=57.16 Aligned_cols=114 Identities=13% Similarity=0.154 Sum_probs=65.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.. . .|+..|+--|.-.+ .+-. ....... .|- .+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~--------~-------~p~~~v~giD~s~~---~l~~----a~~~~~~-~~l-----~n 85 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAK--------D-------RPEQDFLGIEVHSP---GVGA----CLASAHE-EGL-----SN 85 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHH--------H-------CTTSEEEEECSCHH---HHHH----HHHHHHH-TTC-----SS
T ss_pred CCCeEEEEeeeChHHHHHHHH--------H-------CCCCeEEEEEecHH---HHHH----HHHHHHH-hCC-----Cc
Confidence 346899999999988775432 1 24567777775322 1111 1111111 121 23
Q ss_pred eEEeecCCcc---cccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 109 CFFTGVPGSF---YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 109 ~f~~~vpgSF---y~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
+-+ +-+.. ....+|++++|.+++++...|-.. +.. +.++. . ..||+.=++
T Consensus 86 v~~--~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~-~~~----~rr~~-----~---------------~~~l~~~~r 138 (218)
T 3dxy_A 86 LRV--MCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKA-RHN----KRRIV-----Q---------------VPFAELVKS 138 (218)
T ss_dssp EEE--ECSCHHHHHHHHSCTTCEEEEEEESCCCCCSG-GGG----GGSSC-----S---------------HHHHHHHHH
T ss_pred EEE--EECCHHHHHHHHcCCCChheEEEeCCCCccch-hhh----hhhhh-----h---------------HHHHHHHHH
Confidence 222 33333 344689999999999998888442 110 11110 0 135556678
Q ss_pred hhccCceEEEEe
Q 018892 186 ELVAEGRMVLTF 197 (349)
Q Consensus 186 EL~~GG~mvl~~ 197 (349)
-|+|||++++..
T Consensus 139 ~LkpGG~l~i~t 150 (218)
T 3dxy_A 139 KLQLGGVFHMAT 150 (218)
T ss_dssp HEEEEEEEEEEE
T ss_pred HcCCCcEEEEEe
Confidence 899999998876
No 123
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.40 E-value=0.0018 Score=61.88 Aligned_cols=107 Identities=13% Similarity=0.171 Sum_probs=65.4
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCceE
Q 018892 31 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 110 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f 110 (349)
-+|.|+||++|..++.+... + |..+|+..|.. .-. +..-...... .+. ..-+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~------------~---~~~~v~~vD~s-----~~~--l~~a~~~~~~-~~~-----~~~~ 249 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARH------------S---PKIRLTLCDVS-----APA--VEASRATLAA-NGV-----EGEV 249 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHH------------C---TTCBCEEEESB-----HHH--HHHHHHHHHH-TTC-----CCEE
T ss_pred CeEEEecCccCHHHHHHHHH------------C---CCCEEEEEECC-----HHH--HHHHHHHHHH-hCC-----CCEE
Confidence 47999999999988755421 1 34566776632 111 1111111111 121 1122
Q ss_pred EeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccC
Q 018892 111 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 190 (349)
Q Consensus 111 ~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 190 (349)
+.+.++. ++++++|+++++..+||.... ...+...||+.-.+-|+||
T Consensus 250 ---~~~d~~~--~~~~~fD~Iv~~~~~~~g~~~----------------------------~~~~~~~~l~~~~~~Lkpg 296 (343)
T 2pjd_A 250 ---FASNVFS--EVKGRFDMIISNPPFHDGMQT----------------------------SLDAAQTLIRGAVRHLNSG 296 (343)
T ss_dssp ---EECSTTT--TCCSCEEEEEECCCCCSSSHH----------------------------HHHHHHHHHHHHGGGEEEE
T ss_pred ---EEccccc--cccCCeeEEEECCCcccCccC----------------------------CHHHHHHHHHHHHHhCCCC
Confidence 3455554 347899999999999983210 1245677888889999999
Q ss_pred ceEEEEec
Q 018892 191 GRMVLTFL 198 (349)
Q Consensus 191 G~mvl~~~ 198 (349)
|++++...
T Consensus 297 G~l~i~~~ 304 (343)
T 2pjd_A 297 GELRIVAN 304 (343)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEc
Confidence 99999763
No 124
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.37 E-value=0.013 Score=51.22 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=59.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..+..+.... + |..+|+.-|.-.+ ..... .+.... .+- .+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~vD~~~~----~~~~a---~~~~~~-~~~-----~~ 129 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIV-----------G---EDGLVVSIERIPE----LAEKA---ERTLRK-LGY-----DN 129 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEEESCHH----HHHHH---HHHHHH-HTC-----TT
T ss_pred CCCEEEEECCCccHHHHHHHHHh-----------C---CCCEEEEEeCCHH----HHHHH---HHHHHH-cCC-----CC
Confidence 34699999999999887554321 1 2346666664211 11111 111111 121 22
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+- .+.+.+...+.+.+++|+++++.++|++.+ .. .+-|+
T Consensus 130 v~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~--------------------~~-------------------~~~L~ 168 (215)
T 2yxe_A 130 VI--VIVGDGTLGYEPLAPYDRIYTTAAGPKIPE--------------------PL-------------------IRQLK 168 (215)
T ss_dssp EE--EEESCGGGCCGGGCCEEEEEESSBBSSCCH--------------------HH-------------------HHTEE
T ss_pred eE--EEECCcccCCCCCCCeeEEEECCchHHHHH--------------------HH-------------------HHHcC
Confidence 22 233444443334788999999999997541 11 56799
Q ss_pred cCceEEEEecc
Q 018892 189 AEGRMVLTFLG 199 (349)
Q Consensus 189 ~GG~mvl~~~g 199 (349)
|||++++.+..
T Consensus 169 pgG~lv~~~~~ 179 (215)
T 2yxe_A 169 DGGKLLMPVGR 179 (215)
T ss_dssp EEEEEEEEESS
T ss_pred CCcEEEEEECC
Confidence 99999999854
No 125
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.32 E-value=0.046 Score=48.08 Aligned_cols=62 Identities=10% Similarity=0.006 Sum_probs=33.3
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEec
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
+|++++|+++++-.+||.... .+......+ ...... ..+...||+.=.+-|+|||++++.+.
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~--~~~~~~~~~-~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLG--RVLTEREAI-GGGKYG-----------EEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp TCCSCEEEEEECCCCC------------------CCSSS-----------CHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCccc--cccChhhhh-ccCccc-----------hHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 457899999999888886541 111100000 000000 12335677777788999999999864
No 126
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.30 E-value=0.016 Score=56.03 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.+. | .-+|+.-|.. +.-...+..- .. .+- .++
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~------------g----~~~V~gvD~s--~~~~~a~~~~------~~-~~~----~~~ 113 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA------------G----ARKVYAVEAT--KMADHARALV------KA-NNL----DHI 113 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT------------T----CSEEEEEESS--TTHHHHHHHH------HH-TTC----TTT
T ss_pred CCCEEEEeccCcCHHHHHHHhc------------C----CCEEEEEccH--HHHHHHHHHH------HH-cCC----CCe
Confidence 4579999999999887754321 2 1378888874 4433333221 11 111 022
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
+ ..+-+....-.+| +++|+++|....|++... .++..+|+.+.+-|+
T Consensus 114 v--~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e------------------------------~~~~~~l~~~~~~Lk 160 (376)
T 3r0q_C 114 V--EVIEGSVEDISLP-EKVDVIISEWMGYFLLRE------------------------------SMFDSVISARDRWLK 160 (376)
T ss_dssp E--EEEESCGGGCCCS-SCEEEEEECCCBTTBTTT------------------------------CTHHHHHHHHHHHEE
T ss_pred E--EEEECchhhcCcC-CcceEEEEcChhhcccch------------------------------HHHHHHHHHHHhhCC
Confidence 2 2233455444456 899999997777776521 135567888899999
Q ss_pred cCceEEEEe
Q 018892 189 AEGRMVLTF 197 (349)
Q Consensus 189 ~GG~mvl~~ 197 (349)
|||+|++.-
T Consensus 161 pgG~li~~~ 169 (376)
T 3r0q_C 161 PTGVMYPSH 169 (376)
T ss_dssp EEEEEESSE
T ss_pred CCeEEEEec
Confidence 999997653
No 127
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.22 E-value=0.018 Score=52.46 Aligned_cols=20 Identities=10% Similarity=0.135 Sum_probs=15.8
Q ss_pred HHHHHHHHhhCCceEEEEEEE
Q 018892 247 PAEIKSEVIKEGSFTIDHLEV 267 (349)
Q Consensus 247 ~~E~~~~ie~~GsF~i~~~e~ 267 (349)
.+++++.+++.| |++.+...
T Consensus 224 ~~~v~~~l~~~G-f~~~~~~~ 243 (254)
T 2nxc_A 224 APLVREAMAGAG-FRPLEEAA 243 (254)
T ss_dssp HHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHHHHHHHCC-CEEEEEec
Confidence 678888898888 88877644
No 128
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.16 E-value=0.017 Score=56.10 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=61.7
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCceE
Q 018892 31 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 110 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f 110 (349)
-+|.|+||++|..++.+.. . .|..+|+.-|.-. .. +..-...... .|-. ..+-
T Consensus 224 ~~VLDlGcG~G~~s~~la~--------~-------~p~~~V~gvD~s~---~a----l~~Ar~n~~~-ngl~----~~~~ 276 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLD--------K-------NPQAKVVFVDESP---MA----VASSRLNVET-NMPE----ALDR 276 (375)
T ss_dssp SEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEESCH---HH----HHHHHHHHHH-HCGG----GGGG
T ss_pred CeEEEEeCcchHHHHHHHH--------H-------CCCCEEEEEECcH---HH----HHHHHHHHHH-cCCC----cCce
Confidence 7899999999998876542 1 1346788877521 11 1111111111 1100 1111
Q ss_pred EeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccC
Q 018892 111 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 190 (349)
Q Consensus 111 ~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 190 (349)
+..+-+.++. -+|++++|+++|+-.+|+...++... ...||+.=.+-|+||
T Consensus 277 v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~----------------------------~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 277 CEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNV----------------------------AWEMFHHARRCLKIN 327 (375)
T ss_dssp EEEEECSTTT-TCCTTCEEEEEECCCC-------CCH----------------------------HHHHHHHHHHHEEEE
T ss_pred EEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHH----------------------------HHHHHHHHHHhCCCC
Confidence 2224455555 46889999999999999855433211 113555656779999
Q ss_pred ceEEEEe
Q 018892 191 GRMVLTF 197 (349)
Q Consensus 191 G~mvl~~ 197 (349)
|++++..
T Consensus 328 G~l~iv~ 334 (375)
T 4dcm_A 328 GELYIVA 334 (375)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999975
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.08 E-value=0.0058 Score=52.70 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=60.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
....+|.|+||++|..++.+... .|..+|+.-|+-..=-...=+.+.. .
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~~~~~~~~a~~~~~~----------------~ 77 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALA---------------CPGVSVTAVDLSMDALAVARRNAER----------------F 77 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHH---------------CTTEEEEEEECC------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHh---------------CCCCeEEEEECCHHHHHHHHHHHHH----------------h
Confidence 45689999999999887765432 1246777777533211111111110 0
Q ss_pred ceEEeecCCcccccccCC-----CceeEEEecccccccccC---CCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHH
Q 018892 108 QCFFTGVPGSFYGRLFPR-----NSVHLFHSSYSLQWLSQV---PDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 179 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~-----~Svh~~~Ss~alHWLS~~---P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~F 179 (349)
..-+..+-+.+.. .+|+ +++|+++++-.+|+.... +..+........... .......+..|
T Consensus 78 ~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 146 (215)
T 4dzr_A 78 GAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDG----------GEDGLQFYRRM 146 (215)
T ss_dssp -----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC----------------------------------CTTHHHHHH
T ss_pred CCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccC----------CCcHHHHHHHH
Confidence 0012223445544 4555 899999998766654422 111110000000000 00012234678
Q ss_pred HHHhhHhhccCceEEEEec
Q 018892 180 LKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 180 L~~Ra~EL~~GG~mvl~~~ 198 (349)
|+.=.+-|+|||++++...
T Consensus 147 l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 147 AALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HTCCGGGBCSSSEEEEEEC
T ss_pred HHHHHHHhcCCCeEEEEEE
Confidence 8888889999999444443
No 130
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.04 E-value=0.09 Score=46.91 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=16.8
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la 89 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK 89 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 45699999999999988654
No 131
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.03 E-value=0.019 Score=50.90 Aligned_cols=20 Identities=20% Similarity=0.615 Sum_probs=16.0
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..+..+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~ 67 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG 67 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 35689999999999876543
No 132
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.03 E-value=0.018 Score=51.61 Aligned_cols=68 Identities=21% Similarity=0.173 Sum_probs=38.4
Q ss_pred HHHHHHhhHhhccCceEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 177 SLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 177 ~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
..+|+.=++-|||||++++........ +.+...+. +. ....|.|++. +|+.+.+++
T Consensus 119 ~~~l~~~~r~LkpGG~l~i~~~~~~~~-----------~~~~~~~~-----~~-------~~~~~~~~~~-~el~~~l~~ 174 (225)
T 3p2e_A 119 RDILSNVADLAKKEAHFEFVTTYSDSY-----------EEAEIKKR-----GL-------PLLSKAYFLS-EQYKAELSN 174 (225)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCCC-------------------------------------CCHHHHHS-HHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEEeccccc-----------hhchhhhc-----CC-------CCCChhhcch-HHHHHHHHH
Confidence 345566678899999999954222211 00000000 10 0112334443 479999999
Q ss_pred CCceEEEEEEEEe
Q 018892 257 EGSFTIDHLEVSE 269 (349)
Q Consensus 257 ~GsF~i~~~e~~~ 269 (349)
.| |+|...+.+.
T Consensus 175 aG-f~v~~~~~~~ 186 (225)
T 3p2e_A 175 SG-FRIDDVKELD 186 (225)
T ss_dssp HT-CEEEEEEEEC
T ss_pred cC-CCeeeeeecC
Confidence 98 9999998885
No 133
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=95.98 E-value=0.0098 Score=52.46 Aligned_cols=109 Identities=14% Similarity=0.099 Sum_probs=60.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCC---CCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 105 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~---~~~~ 105 (349)
..-+|.|+||++|..++.+.... . ....|..+|+.-|.-.. ..+... ..... .+- ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~----~------~~~~~~~~v~~vD~~~~----~~~~a~---~~~~~-~~~~~~~~-- 139 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKM----N------VLENKNSYVIGLERVKD----LVNFSL---ENIKR-DKPELLKI-- 139 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHT----T------TTTCTTCEEEEEESCHH----HHHHHH---HHHHH-HCGGGGSS--
T ss_pred CCCEEEEECCCCCHHHHHHHHHh----c------ccCCCCCEEEEEeCCHH----HHHHHH---HHHHH-cCcccccc--
Confidence 34699999999998777554311 0 00124467777774221 111111 11111 110 00
Q ss_pred CCceEEeecCCcccccc----cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 018892 106 AGQCFFTGVPGSFYGRL----FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 181 (349)
Q Consensus 106 ~~~~f~~~vpgSFy~rl----fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~ 181 (349)
.++- .+-+....-. ++.+++|++++..++|++ |. .+
T Consensus 140 -~~v~--~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~---~~-----------------~~----------------- 179 (227)
T 2pbf_A 140 -DNFK--IIHKNIYQVNEEEKKELGLFDAIHVGASASEL---PE-----------------IL----------------- 179 (227)
T ss_dssp -TTEE--EEECCGGGCCHHHHHHHCCEEEEEECSBBSSC---CH-----------------HH-----------------
T ss_pred -CCEE--EEECChHhcccccCccCCCcCEEEECCchHHH---HH-----------------HH-----------------
Confidence 2222 1234454444 567889999999988863 21 11
Q ss_pred HhhHhhccCceEEEEecc
Q 018892 182 CRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 182 ~Ra~EL~~GG~mvl~~~g 199 (349)
.+-|+|||++++.+..
T Consensus 180 --~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 180 --VDLLAENGKLIIPIEE 195 (227)
T ss_dssp --HHHEEEEEEEEEEEEE
T ss_pred --HHhcCCCcEEEEEEcc
Confidence 5679999999999864
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.90 E-value=0.017 Score=50.91 Aligned_cols=47 Identities=15% Similarity=-0.120 Sum_probs=33.3
Q ss_pred CCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEE
Q 018892 115 PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 115 pgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 194 (349)
-+.+...+.+++++|++++..++|++.+ ++ .+-|+|||+++
T Consensus 122 ~~d~~~~~~~~~~fD~v~~~~~~~~~~~--------------------~~-------------------~~~L~pgG~l~ 162 (231)
T 1vbf_A 122 LGDGTLGYEEEKPYDRVVVWATAPTLLC--------------------KP-------------------YEQLKEGGIMI 162 (231)
T ss_dssp ESCGGGCCGGGCCEEEEEESSBBSSCCH--------------------HH-------------------HHTEEEEEEEE
T ss_pred ECCcccccccCCCccEEEECCcHHHHHH--------------------HH-------------------HHHcCCCcEEE
Confidence 3445444445789999999999987531 11 45799999999
Q ss_pred EEeccc
Q 018892 195 LTFLGR 200 (349)
Q Consensus 195 l~~~g~ 200 (349)
+.....
T Consensus 163 ~~~~~~ 168 (231)
T 1vbf_A 163 LPIGVG 168 (231)
T ss_dssp EEECSS
T ss_pred EEEcCC
Confidence 997543
No 135
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.85 E-value=0.03 Score=48.06 Aligned_cols=117 Identities=21% Similarity=0.235 Sum_probs=62.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.+.. + |.-+|+.-|.-..=. ......... .|- ..++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~-----------~---~~~~v~~vD~s~~~~-------~~a~~~~~~-~~~----~~~v 76 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLV-----------G---ENGRVFGFDIQDKAI-------ANTTKKLTD-LNL----IDRV 76 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHH-----------C---TTCEEEEECSCHHHH-------HHHHHHHHH-TTC----GGGE
T ss_pred CCEEEEcCCCCCHHHHHHHHHh-----------C---CCCEEEEEECCHHHH-------HHHHHHHHH-cCC----CCCe
Confidence 4699999999998877554321 1 224677777532111 111111111 110 0122
Q ss_pred EEeecCCcccccc-cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 018892 110 FFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 188 (349)
Q Consensus 110 f~~~vpgSFy~rl-fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 188 (349)
..+-+++..-. ++++++|++++...+ .|..- ..+. ..+ .|...+|+.=.+-|+
T Consensus 77 --~~~~~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~----~~~~----~~~-----------~~~~~~l~~~~~~Lk 130 (197)
T 3eey_A 77 --TLIKDGHQNMDKYIDCPVKAVMFNLGY-----LPSGD----HSIS----TRP-----------ETTIQALSKAMELLV 130 (197)
T ss_dssp --EEECSCGGGGGGTCCSCEEEEEEEESB-----CTTSC----TTCB----CCH-----------HHHHHHHHHHHHHEE
T ss_pred --EEEECCHHHHhhhccCCceEEEEcCCc-----ccCcc----cccc----cCc-----------ccHHHHHHHHHHhCc
Confidence 22334443222 566899999988665 22110 0010 011 244456777778899
Q ss_pred cCceEEEEec
Q 018892 189 AEGRMVLTFL 198 (349)
Q Consensus 189 ~GG~mvl~~~ 198 (349)
|||++++...
T Consensus 131 ~gG~l~~~~~ 140 (197)
T 3eey_A 131 TGGIITVVIY 140 (197)
T ss_dssp EEEEEEEEEC
T ss_pred CCCEEEEEEc
Confidence 9999998864
No 136
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.78 E-value=0.068 Score=50.92 Aligned_cols=104 Identities=17% Similarity=0.225 Sum_probs=60.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.+ .| ..+|+.-|.. ..-...+ . .... .|- ..++
T Consensus 65 ~~~VLDiGcGtG~ls~~la~------------~g----~~~v~gvD~s--~~~~~a~---~---~~~~-~~~----~~~i 115 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAK------------AG----AKKVLGVDQS--EILYQAM---D---IIRL-NKL----EDTI 115 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHH------------TT----CSEEEEEESS--THHHHHH---H---HHHH-TTC----TTTE
T ss_pred CCEEEEeeccCcHHHHHHHH------------cC----CCEEEEEChH--HHHHHHH---H---HHHH-cCC----CCcE
Confidence 45899999999987664431 11 2478888864 2222221 1 1111 121 0222
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
-+ +-+...+--+|++++|+++|....+-+.. ..++..+|+.+.+-|+|
T Consensus 116 ~~--~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~------------------------------~~~~~~~l~~~~~~Lkp 163 (340)
T 2fyt_A 116 TL--IKGKIEEVHLPVEKVDVIISEWMGYFLLF------------------------------ESMLDSVLYAKNKYLAK 163 (340)
T ss_dssp EE--EESCTTTSCCSCSCEEEEEECCCBTTBTT------------------------------TCHHHHHHHHHHHHEEE
T ss_pred EE--EEeeHHHhcCCCCcEEEEEEcCchhhccC------------------------------HHHHHHHHHHHHhhcCC
Confidence 21 33444444578899999999752211110 12455688888999999
Q ss_pred CceEE
Q 018892 190 EGRMV 194 (349)
Q Consensus 190 GG~mv 194 (349)
||+++
T Consensus 164 gG~li 168 (340)
T 2fyt_A 164 GGSVY 168 (340)
T ss_dssp EEEEE
T ss_pred CcEEE
Confidence 99998
No 137
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.77 E-value=0.14 Score=45.88 Aligned_cols=21 Identities=19% Similarity=0.086 Sum_probs=17.2
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..++.+.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~ 85 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA 85 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHH
Confidence 456999999999998886544
No 138
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.75 E-value=0.11 Score=46.68 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=17.4
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
...+|.|+||++|..++.+...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~ 72 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLL 72 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHH
Confidence 5689999999999777655543
No 139
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=95.75 E-value=0.026 Score=51.22 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=63.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.+ . .+. +|+.-|+-..=. +... ..... .+- ..+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~------------~---~~~-~v~gvDi~~~~~----~~a~---~n~~~-~~~----~~~ 100 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLST------------R---TKA-KIVGVEIQERLA----DMAK---RSVAY-NQL----EDQ 100 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHT------------T---CCC-EEEEECCSHHHH----HHHH---HHHHH-TTC----TTT
T ss_pred CCCEEEEcCCchhHHHHHHHH------------h---cCC-cEEEEECCHHHH----HHHH---HHHHH-CCC----ccc
Confidence 457999999999988775432 1 122 777777532111 1111 11111 111 012
Q ss_pred eEEeecCCccccc--ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 109 CFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 109 ~f~~~vpgSFy~r--lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
+- .+-+.+..- -+|++++|+++|+-.++..+. ..+.. +......-......++..||+.=++-
T Consensus 101 v~--~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~--~~~~~-----------~~~~~~~a~~~~~~~~~~~l~~~~~~ 165 (259)
T 3lpm_A 101 IE--IIEYDLKKITDLIPKERADIVTCNPPYFATPD--TSLKN-----------TNEHFRIARHEVMCTLEDTIRVAASL 165 (259)
T ss_dssp EE--EECSCGGGGGGTSCTTCEEEEEECCCC------------------------------------HHHHHHHHHHHHH
T ss_pred EE--EEECcHHHhhhhhccCCccEEEECCCCCCCcc--ccCCC-----------CchHHHhhhccccCCHHHHHHHHHHH
Confidence 22 233444432 367899999999755544310 00000 00000000111235778899888899
Q ss_pred hccCceEEEEe
Q 018892 187 LVAEGRMVLTF 197 (349)
Q Consensus 187 L~~GG~mvl~~ 197 (349)
|+|||++++..
T Consensus 166 LkpgG~l~~~~ 176 (259)
T 3lpm_A 166 LKQGGKANFVH 176 (259)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCCcEEEEEE
Confidence 99999999965
No 140
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.68 E-value=0.068 Score=44.57 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=41.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|.|+||++|..++.+.. +..+|+..|.-.. ..+.. ...... .+- .+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~~----~~~~a---~~~~~~-~~~-----~~ 84 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLDG----AIEVT---KQNLAK-FNI-----KN 84 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSHH----HHHHH---HHHHHH-TTC-----CS
T ss_pred CCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCHH----HHHHH---HHHHHH-cCC-----Cc
Confidence 346999999999998775542 2356666663211 11111 111111 111 12
Q ss_pred eEEeecCCcccccccCCCceeEEEeccc
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYS 136 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~a 136 (349)
+..+-+.+.. .+|++++|+++++..
T Consensus 85 --~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 85 --CQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp --EEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred --EEEEECCccc-cccCCCCcEEEECCc
Confidence 2224455555 567788999998766
No 141
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.65 E-value=0.1 Score=47.60 Aligned_cols=128 Identities=18% Similarity=0.229 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
...+|.|+||++|..++.+... .|..+|+..|.-.. ..+... ..... .|- .+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~---------------~~~~~v~~vD~s~~----~l~~a~---~n~~~-~~~-----~~ 160 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASE---------------RPDCEIIAVDRMPD----AVSLAQ---RNAQH-LAI-----KN 160 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHH---------------CTTSEEEEECSSHH----HHHHHH---HHHHH-HTC-----CS
T ss_pred CCCEEEEecCCccHHHHHHHHh---------------CCCCEEEEEECCHH----HHHHHH---HHHHH-cCC-----Cc
Confidence 3568999999999987755421 13467777774211 111111 11111 121 12
Q ss_pred eEEeecCCcccccccCCCceeEEEeccccccccc--CCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ--VPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~--~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
+..+-+.+.. .+|++++|+++|+...+|... .++.+.. | .|....-. ....-.++..+|+.=.+-
T Consensus 161 --v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~-----~----~p~~al~~-~~~g~~~~~~~l~~~~~~ 227 (276)
T 2b3t_A 161 --IHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVR-----F----EPLTALVA-ADSGMADIVHIIEQSRNA 227 (276)
T ss_dssp --EEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGG-----S----SCSTTTBC-HHHHTHHHHHHHHHHGGG
T ss_pred --eEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhh-----c----CcHHHHcC-CCcHHHHHHHHHHHHHHh
Confidence 2224455554 356789999999977776543 0001100 0 00000000 001124567788777888
Q ss_pred hccCceEEEEe
Q 018892 187 LVAEGRMVLTF 197 (349)
Q Consensus 187 L~~GG~mvl~~ 197 (349)
|+|||++++..
T Consensus 228 LkpgG~l~~~~ 238 (276)
T 2b3t_A 228 LVSGGFLLLEH 238 (276)
T ss_dssp EEEEEEEEEEC
T ss_pred cCCCCEEEEEE
Confidence 99999999874
No 142
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.49 E-value=0.049 Score=48.44 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=15.5
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.+.
T Consensus 92 ~~~vLdiG~G~G~~~~~la 110 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS 110 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH
Confidence 4589999999999887554
No 143
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=95.49 E-value=0.042 Score=52.01 Aligned_cols=104 Identities=18% Similarity=0.268 Sum_probs=60.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.+ .| .-+|+.-|.. ..-...+. .... .+- .+++
T Consensus 39 ~~~VLDiGcGtG~ls~~la~------------~g----~~~v~~vD~s--~~~~~a~~------~~~~-~~~----~~~i 89 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAK------------HG----AKHVIGVDMS--SIIEMAKE------LVEL-NGF----SDKI 89 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHH------------TC----CSEEEEEESS--THHHHHHH------HHHH-TTC----TTTE
T ss_pred CCEEEEecCccHHHHHHHHH------------CC----CCEEEEEChH--HHHHHHHH------HHHH-cCC----CCCE
Confidence 35899999999987764331 12 2478888874 23222221 1111 111 0222
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
-+ +-+..-+--+|.+++|+++|....+.|... .++..+|..+.+-|+|
T Consensus 90 ~~--~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~------------------------------~~~~~~l~~~~~~Lkp 137 (328)
T 1g6q_1 90 TL--LRGKLEDVHLPFPKVDIIISEWMGYFLLYE------------------------------SMMDTVLYARDHYLVE 137 (328)
T ss_dssp EE--EESCTTTSCCSSSCEEEEEECCCBTTBSTT------------------------------CCHHHHHHHHHHHEEE
T ss_pred EE--EECchhhccCCCCcccEEEEeCchhhcccH------------------------------HHHHHHHHHHHhhcCC
Confidence 21 334444434778899999997544433210 1234677888899999
Q ss_pred CceEE
Q 018892 190 EGRMV 194 (349)
Q Consensus 190 GG~mv 194 (349)
||+++
T Consensus 138 gG~li 142 (328)
T 1g6q_1 138 GGLIF 142 (328)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99997
No 144
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.47 E-value=0.0098 Score=50.96 Aligned_cols=118 Identities=15% Similarity=0.148 Sum_probs=64.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|+|+||++|..++.+.... ... ..+...|.-+|+..|+-..- .++ +-
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~----~~~--~~~~~~~~~~v~~vD~s~~~------~~~-----------------~~ 72 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKV----NAA--GTDPSSPVGFVLGVDLLHIF------PLE-----------------GA 72 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHT----TTT--CCCTTSCCCEEEEECSSCCC------CCT-----------------TC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh----ccc--cccccCCCceEEEEechhcc------cCC-----------------CC
Confidence 34699999999999887654321 000 00011233678888865420 000 11
Q ss_pred eEEeecCCccccc--------ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 018892 109 CFFTGVPGSFYGR--------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 180 (349)
Q Consensus 109 ~f~~~vpgSFy~r--------lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL 180 (349)
-+. ..+.+... .+|++++|+++|..++||.-. + ....+ ........+|
T Consensus 73 ~~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~-~-------------------~~~~~--~~~~~~~~~l 128 (196)
T 2nyu_A 73 TFL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF-R-------------------DLDHD--RLISLCLTLL 128 (196)
T ss_dssp EEE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC-H-------------------HHHHH--HHHHHHHHHH
T ss_pred eEE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC-c-------------------ccCHH--HHHHHHHHHH
Confidence 121 02333321 256789999999877766321 0 00000 1122334666
Q ss_pred HHhhHhhccCceEEEEecc
Q 018892 181 KCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 181 ~~Ra~EL~~GG~mvl~~~g 199 (349)
+.=.+-|+|||+|++....
T Consensus 129 ~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 129 SVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHhcCCCEEEEEecC
Confidence 6667889999999998653
No 145
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.46 E-value=0.035 Score=49.07 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=58.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHH-HHHhhCCCCCCCCc
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI-LRKQLGSASGAAGQ 108 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~-~~~~~~~~~~~~~~ 108 (349)
.-+|.|+||++|..+..+.... .. .+ ..+.-+|+.-|.-..=-...=+.+...... +.. .+
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~----~~----~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---------~~ 146 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYI----KA----KG-VDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS---------GQ 146 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH----HH----SC-CCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH---------TS
T ss_pred CCEEEEECCCccHHHHHHHHhc----cc----cc-CCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC---------Cc
Confidence 4699999999999887654421 11 01 122346677664321111111111110000 001 12
Q ss_pred eEEeecCCcccccccCC-CceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 109 CFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~-~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+-+ +-+.... -+|+ +++|++++..++||+. . +. .+-|
T Consensus 147 v~~--~~~d~~~-~~~~~~~fD~I~~~~~~~~~~---~-----------------~~-------------------~~~L 184 (227)
T 1r18_A 147 LLI--VEGDGRK-GYPPNAPYNAIHVGAAAPDTP---T-----------------EL-------------------INQL 184 (227)
T ss_dssp EEE--EESCGGG-CCGGGCSEEEEEECSCBSSCC---H-----------------HH-------------------HHTE
T ss_pred eEE--EECCccc-CCCcCCCccEEEECCchHHHH---H-----------------HH-------------------HHHh
Confidence 211 2244444 3455 8899999999988743 1 11 4569
Q ss_pred ccCceEEEEecc
Q 018892 188 VAEGRMVLTFLG 199 (349)
Q Consensus 188 ~~GG~mvl~~~g 199 (349)
+|||+|++.+..
T Consensus 185 kpgG~lvi~~~~ 196 (227)
T 1r18_A 185 ASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEEEEEESC
T ss_pred cCCCEEEEEEec
Confidence 999999999864
No 146
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=95.42 E-value=0.23 Score=43.83 Aligned_cols=21 Identities=33% Similarity=0.365 Sum_probs=16.7
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..++.+.+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~ 94 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVAD 94 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHH
Confidence 456899999999998876543
No 147
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.37 E-value=0.027 Score=48.68 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=57.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+... .|..+|+..|.-.. ..+... ..... .+- .+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~s~~----~~~~a~---~~~~~-~~~-----~~- 116 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIV---------------RPEAHFTLLDSLGK----RVRFLR---QVQHE-LKL-----EN- 116 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHH---------------CTTSEEEEEESCHH----HHHHHH---HHHHH-TTC-----SS-
T ss_pred CCeEEEECCCCCHHHHHHHHH---------------CCCCEEEEEeCCHH----HHHHHH---HHHHH-cCC-----CC-
Confidence 358999999999998765432 13467777774321 111111 11111 111 23
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
+..+.+.+.. +.|.+++|++++.. + .++..+|+.=.+-|+|
T Consensus 117 -v~~~~~d~~~-~~~~~~~D~i~~~~-----------~--------------------------~~~~~~l~~~~~~L~~ 157 (207)
T 1jsx_A 117 -IEPVQSRVEE-FPSEPPFDGVISRA-----------F--------------------------ASLNDMVSWCHHLPGE 157 (207)
T ss_dssp -EEEEECCTTT-SCCCSCEEEEECSC-----------S--------------------------SSHHHHHHHHTTSEEE
T ss_pred -eEEEecchhh-CCccCCcCEEEEec-----------c--------------------------CCHHHHHHHHHHhcCC
Confidence 2234455543 33678899999742 0 0133556666788999
Q ss_pred CceEEEEe
Q 018892 190 EGRMVLTF 197 (349)
Q Consensus 190 GG~mvl~~ 197 (349)
||++++..
T Consensus 158 gG~l~~~~ 165 (207)
T 1jsx_A 158 QGRFYALK 165 (207)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99999985
No 148
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.33 E-value=0.093 Score=52.13 Aligned_cols=21 Identities=24% Similarity=0.260 Sum_probs=17.2
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..++.+..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~ 262 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAAL 262 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH
Confidence 457899999999999886554
No 149
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.31 E-value=0.03 Score=50.17 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=42.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
..-+|+|+||++|..++.+...+ + |..+|+.-|+-.. ..+... ..... .|-. ++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~-----------~---~~~~v~~~D~~~~----~~~~a~---~~~~~-~~~~----~~ 146 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV-----------G---PEGRVVSYEIRED----FAKLAW---ENIKW-AGFD----DR 146 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEECSCHH----HHHHHH---HHHHH-HTCT----TT
T ss_pred CCCEEEEecCCchHHHHHHHHHh-----------C---CCeEEEEEecCHH----HHHHHH---HHHHH-cCCC----Cc
Confidence 45689999999998887665432 1 3466777775321 111111 11111 1210 21
Q ss_pred eEEeecCCcccccccCCCceeEEEe
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHS 133 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~S 133 (349)
+ ..+-+.+. ..+|++++|++++
T Consensus 147 v--~~~~~d~~-~~~~~~~~D~v~~ 168 (255)
T 3mb5_A 147 V--TIKLKDIY-EGIEEENVDHVIL 168 (255)
T ss_dssp E--EEECSCGG-GCCCCCSEEEEEE
T ss_pred e--EEEECchh-hccCCCCcCEEEE
Confidence 2 22446666 4489999999997
No 150
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.26 E-value=0.042 Score=48.27 Aligned_cols=20 Identities=30% Similarity=0.262 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..+..+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la 96 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA 96 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHH
Confidence 35699999999999887654
No 151
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.23 E-value=0.24 Score=40.79 Aligned_cols=19 Identities=26% Similarity=0.111 Sum_probs=15.7
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4589999999999887654
No 152
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.11 E-value=0.059 Score=50.56 Aligned_cols=103 Identities=14% Similarity=0.174 Sum_probs=59.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.... + ...+|+.-|+-.+ ..+.. .+.... .|- .+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~-----------~---~~~~v~gvD~s~~----~~~~a---~~~~~~-~g~-----~~- 127 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVV-----------G---EKGLVVSVEYSRK----ICEIA---KRNVER-LGI-----EN- 127 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-----------C---TTCEEEEEESCHH----HHHHH---HHHHHH-TTC-----CS-
T ss_pred cCEEEEecCCchHHHHHHHHhc-----------C---CCCEEEEEECCHH----HHHHH---HHHHHH-cCC-----CC-
Confidence 4699999999998876554321 1 1245666664211 11111 111111 121 23
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 189 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 189 (349)
+..+-+.+..-+.+.+++|++++...+|++.+ .+ .+-|+|
T Consensus 128 -v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~~--------------------~~-------------------~~~Lkp 167 (317)
T 1dl5_A 128 -VIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPE--------------------TW-------------------FTQLKE 167 (317)
T ss_dssp -EEEEESCGGGCCGGGCCEEEEEECSBBSCCCH--------------------HH-------------------HHHEEE
T ss_pred -eEEEECChhhccccCCCeEEEEEcCCHHHHHH--------------------HH-------------------HHhcCC
Confidence 22234555554556789999999999987531 11 457999
Q ss_pred CceEEEEeccc
Q 018892 190 EGRMVLTFLGR 200 (349)
Q Consensus 190 GG~mvl~~~g~ 200 (349)
||++++.+...
T Consensus 168 gG~lvi~~~~~ 178 (317)
T 1dl5_A 168 GGRVIVPINLK 178 (317)
T ss_dssp EEEEEEEBCBG
T ss_pred CcEEEEEECCC
Confidence 99999987544
No 153
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.09 E-value=0.029 Score=52.98 Aligned_cols=20 Identities=20% Similarity=0.378 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
.-+|+|+||++|..++.+..
T Consensus 106 g~~VLDiG~G~G~~~~~la~ 125 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSK 125 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHH
Confidence 45899999999999886644
No 154
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=95.08 E-value=0.0094 Score=53.25 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+.+-+|.|+||+.|+.++..+. ..|..+|.-.|. |.-.-.+-. ... ...|. ..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~---------------~~p~a~~~A~Di-----~~~~leiar--~~~-~~~g~----~~ 100 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWN---------------ENEKIIYHAYDI-----DRAEIAFLS--SII-GKLKT----TI 100 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHC---------------SSCCCEEEEECS-----CHHHHHHHH--HHH-HHSCC----SS
T ss_pred CCCCeEEEecCCCCHHHHHHHh---------------cCCCCEEEEEeC-----CHHHHHHHH--HHH-HhcCC----Cc
Confidence 4577999999999999885532 245568887773 322221111 111 11222 12
Q ss_pred ceEEeecCCcccccccCCCceeEEEeccccccccc
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 142 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~ 142 (349)
++-+ ..+-.. .|+.++|++.++..||-|.+
T Consensus 101 ~v~~----~d~~~~-~~~~~~DvVLa~k~LHlL~~ 130 (200)
T 3fzg_A 101 KYRF----LNKESD-VYKGTYDVVFLLKMLPVLKQ 130 (200)
T ss_dssp EEEE----ECCHHH-HTTSEEEEEEEETCHHHHHH
T ss_pred cEEE----eccccc-CCCCCcChhhHhhHHHhhhh
Confidence 4444 233333 68899999999999999954
No 155
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.02 E-value=0.13 Score=50.73 Aligned_cols=126 Identities=11% Similarity=0.072 Sum_probs=72.0
Q ss_pred CCceEEEeecCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCC
Q 018892 28 PTKVAIADLGCS------SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS 101 (349)
Q Consensus 28 ~~~~~iaD~Gcs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~ 101 (349)
.++.+|.|+||+ +|..|+.++... .|..+|+--|+-.+= . . ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~--------------fP~a~V~GVDiSp~m-------~-~--------~~- 263 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF--------------FPRGQIYGLDIMDKS-------H-V--------DE- 263 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH--------------CTTCEEEEEESSCCG-------G-G--------CB-
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHHH-------h-h--------cC-
Confidence 356899999999 778777554321 134678888875541 0 0 01
Q ss_pred CCCCCCce-EEeecCCcccccccC------CCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHH
Q 018892 102 ASGAAGQC-FFTGVPGSFYGRLFP------RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQR 174 (349)
Q Consensus 102 ~~~~~~~~-f~~~vpgSFy~rlfP------~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~ 174 (349)
.++ |.. |...+-=|+ ++++|+++|..+ ||..
T Consensus 264 -----~rI~fv~---GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--------------------------------- 301 (419)
T 3sso_A 264 -----LRIRTIQ---GDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--------------------------------- 301 (419)
T ss_dssp -----TTEEEEE---CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH---------------------------------
T ss_pred -----CCcEEEE---ecccccchhhhhhcccCCccEEEECCc-ccch---------------------------------
Confidence 222 222 333332233 689999999755 5422
Q ss_pred HHHHHHHHhhHhhccCceEEEEecccCC----CCCCC--hhhhHHHHHHHHHHHHHHh
Q 018892 175 DFSLFLKCRSEELVAEGRMVLTFLGRKS----QDPSS--KECCYIWELLATALNNMVS 226 (349)
Q Consensus 175 D~~~FL~~Ra~EL~~GG~mvl~~~g~~~----~~~~~--~~~~~~~~~l~~al~~mv~ 226 (349)
|+..+|+.=.+-|||||++++.-+-..- .+... .....+.+.++..+..+-.
T Consensus 302 d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 302 HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 2233455557899999999997443211 11110 1123467778888877743
No 156
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=94.94 E-value=0.15 Score=42.69 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=15.9
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 33 ~~~~vldiG~G~G~~~~~l~ 52 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA 52 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 34699999999998876543
No 157
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.92 E-value=0.08 Score=47.47 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.2
Q ss_pred HHHHHHHHhhHhhccCceEEEE
Q 018892 175 DFSLFLKCRSEELVAEGRMVLT 196 (349)
Q Consensus 175 D~~~FL~~Ra~EL~~GG~mvl~ 196 (349)
|...||+.=++-|||||+|++.
T Consensus 148 ~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 148 QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEEC
T ss_pred chhhhhhhhhheeCCCCEEEEE
Confidence 5566777778899999999753
No 158
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=94.92 E-value=0.14 Score=46.55 Aligned_cols=21 Identities=24% Similarity=0.314 Sum_probs=16.6
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..|..+..
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~ 96 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSD 96 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHH
T ss_pred CCCEEEEEeecCCHHHHHHHH
Confidence 357999999999998775543
No 159
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=94.79 E-value=0.077 Score=46.86 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=16.0
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..+..+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la 76 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA 76 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34689999999999876543
No 160
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.78 E-value=0.096 Score=47.20 Aligned_cols=20 Identities=35% Similarity=0.571 Sum_probs=16.2
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..+..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~ 104 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA 104 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 45789999999999877543
No 161
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=94.63 E-value=0.11 Score=48.70 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=16.3
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+++-+|.|+||++|..+..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l 113 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREV 113 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHH
Confidence 45679999999999987644
No 162
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.61 E-value=0.066 Score=47.10 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.5
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
++-+|.|+||++|..|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la 77 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMA 77 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 35689999999999988654
No 163
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.43 E-value=0.14 Score=48.68 Aligned_cols=18 Identities=28% Similarity=0.624 Sum_probs=14.9
Q ss_pred ceEEEeecCCCCcccHHH
Q 018892 30 KVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~ 47 (349)
.-+|.|+||++|..++.+
T Consensus 51 ~~~VLDiGcGtG~ls~~l 68 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFA 68 (348)
T ss_dssp TCEEEEETCTTSHHHHHH
T ss_pred cCEEEEcCCCccHHHHHH
Confidence 469999999999977644
No 164
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.37 E-value=0.094 Score=49.39 Aligned_cols=49 Identities=10% Similarity=-0.083 Sum_probs=31.7
Q ss_pred CCCceeEEEecccccc-cccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 124 PRNSVHLFHSSYSLQW-LSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 124 P~~Svh~~~Ss~alHW-LS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
+++++|++++....|| ++..+..+. ...|++.=.+-|+|||+|++....
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~---------------------------~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 148 TEERYDVVIIDLTDPVGEDNPARLLY---------------------------TVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp CCCCEEEEEEECCCCBSTTCGGGGGS---------------------------SHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCCccEEEECCCCcccccCcchhcc---------------------------HHHHHHHHHHhcCCCcEEEEEccC
Confidence 4678999999888877 221111110 123444556789999999998643
No 165
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=94.31 E-value=0.17 Score=44.06 Aligned_cols=19 Identities=16% Similarity=-0.043 Sum_probs=15.7
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH
T ss_pred CCeEEEcCCccCHHHHHHH
Confidence 3589999999999887643
No 166
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.21 E-value=0.19 Score=43.93 Aligned_cols=20 Identities=20% Similarity=0.214 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la 74 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWC 74 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 34689999999999887654
No 167
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.18 E-value=0.078 Score=47.77 Aligned_cols=123 Identities=12% Similarity=0.126 Sum_probs=59.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
.+.-+|+|+||++|..++.+.. ..|...|+--|.-.. .-...+ .....+........ .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~---------------~~p~~~v~GiDis~~-~l~~A~---~~~~~l~~~~~~~~---~ 102 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSP---------------LFPDTLILGLEIRVK-VSDYVQ---DRIRALRAAPAGGF---Q 102 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGG---------------GSTTSEEEEEESCHH-HHHHHH---HHHHHHHHSTTCCC---T
T ss_pred CCCCeEEEEccCCcHHHHHHHH---------------HCCCCeEEEEECCHH-HHHHHH---HHHHHHHHHHhcCC---C
Confidence 3467899999999998775431 124466776663211 000010 00000111000011 2
Q ss_pred ce-EEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 108 QC-FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 108 ~~-f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
++ |+.+=-..+....||++++|.++..+.-.|..+. . .+.++ ....||+.=++-
T Consensus 103 nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~-h----~krr~--------------------~~~~~l~~~~~~ 157 (235)
T 3ckk_A 103 NIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRT-K----HKWRI--------------------ISPTLLAEYAYV 157 (235)
T ss_dssp TEEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------C--------------------CCHHHHHHHHHH
T ss_pred eEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhh-h----hhhhh--------------------hhHHHHHHHHHH
Confidence 33 2222222233345889999999987776664320 0 00000 012455555788
Q ss_pred hccCceEEEEe
Q 018892 187 LVAEGRMVLTF 197 (349)
Q Consensus 187 L~~GG~mvl~~ 197 (349)
|+|||++++..
T Consensus 158 LkpGG~l~~~t 168 (235)
T 3ckk_A 158 LRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 99999999876
No 168
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=94.18 E-value=0.27 Score=44.69 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=33.8
Q ss_pred ccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHH-HHHHHHHHHHHhhHhhccCceEEEEec
Q 018892 122 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ-FQRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 122 lfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q-~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
.+|++++|+++|+--.++... ... + ....+.+.. ...++..||+.=++-|+|||+|++...
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~---~~~------------~-~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGD---RRT------------P-DALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCCTTCEEEEEECCCC-------------------------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCCcCEEEECCCCcCCCC---CCC------------c-CHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 367899999999855555320 000 0 011111111 123477888888899999999999763
No 169
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.03 E-value=0.71 Score=40.84 Aligned_cols=20 Identities=30% Similarity=0.399 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
.-+|.|+||++|..++.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~ 80 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFAS 80 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHH
Confidence 45899999999999887654
No 170
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.99 E-value=0.27 Score=46.47 Aligned_cols=21 Identities=14% Similarity=0.003 Sum_probs=16.6
Q ss_pred CCceEEEeecCCCCcccHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
...-+|+|+||++|+-|...+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~l 141 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILL 141 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHH
T ss_pred CCcCEEEEECCCccHHHHHHH
Confidence 456799999999998776554
No 171
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=93.96 E-value=0.11 Score=50.54 Aligned_cols=20 Identities=25% Similarity=0.300 Sum_probs=17.0
Q ss_pred HHHHHHHHhhHhhccCceEE
Q 018892 175 DFSLFLKCRSEELVAEGRMV 194 (349)
Q Consensus 175 D~~~FL~~Ra~EL~~GG~mv 194 (349)
.+..+|.+|.+=|+|||+|+
T Consensus 167 ~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 167 MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhHHHHHHhhCCCCceEC
Confidence 35577889999999999986
No 172
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=93.91 E-value=0.38 Score=44.16 Aligned_cols=94 Identities=14% Similarity=0.074 Sum_probs=45.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.. .+ .-+|+..|.++.+.-.+.+.-... + .....+-......++
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~------------~~----~~~v~~~D~s~~~~~~~a~~n~~~-N-~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFL------------AG----ADQVVATDYPDPEILNSLESNIRE-H-TANSCSSETVKRASP 141 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHH------------TT----CSEEEEEECSCHHHHHHHHHHHHT-T-CC----------CCC
T ss_pred CCeEEEecccccHHHHHHHH------------cC----CCEEEEEeCCCHHHHHHHHHHHHH-h-hhhhcccccCCCCCe
Confidence 35899999999988764321 12 137888887543333322211100 0 000001000000122
Q ss_pred -EEeecCCccccccc---CCCceeEEEecccccccc
Q 018892 110 -FFTGVPGSFYGRLF---PRNSVHLFHSSYSLQWLS 141 (349)
Q Consensus 110 -f~~~vpgSFy~rlf---P~~Svh~~~Ss~alHWLS 141 (349)
+....-|.....+. +++++|+++++.++|+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~ 177 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ 177 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChH
Confidence 22122233333333 678999999988888743
No 173
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=93.90 E-value=0.009 Score=53.21 Aligned_cols=83 Identities=17% Similarity=0.068 Sum_probs=46.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+.+. + .+|+..|+-.. ..+... ..... .|- ..++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~------------~-----~~v~~vD~s~~----~~~~a~---~~~~~-~~~----~~~~ 129 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT------------G-----MRVIAIDIDPV----KIALAR---NNAEV-YGI----ADKI 129 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT------------T-----CEEEEEESCHH----HHHHHH---HHHHH-TTC----GGGE
T ss_pred CCEEEECccccCHHHHHHHHc------------C-----CEEEEEECCHH----HHHHHH---HHHHH-cCC----CcCe
Confidence 468999999999998876531 1 45666664211 111111 11111 110 0122
Q ss_pred EEeecCCcccccccCCCceeEEEecccccccccCC
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP 144 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P 144 (349)
..+-+.+..-. |++++|+++++..+||.....
T Consensus 130 --~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 130 --EFICGDFLLLA-SFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp --EEEESCHHHHG-GGCCCSEEEECCCCSSGGGGG
T ss_pred --EEEECChHHhc-ccCCCCEEEECCCcCCcchhh
Confidence 12334554433 788999999999999987543
No 174
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=93.80 E-value=0.25 Score=48.41 Aligned_cols=126 Identities=17% Similarity=0.122 Sum_probs=70.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..|+.+.+. . +..+|+.+|.-.+=...+-+.+.. .|- +.-
T Consensus 247 g~~VLDlgaG~G~~t~~la~~------------~---~~~~v~a~D~~~~~l~~~~~~~~~--------~g~-----~~~ 298 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEV------------A---PEAQVVAVDIDEQRLSRVYDNLKR--------LGM-----KAT 298 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHH------------C---TTCEEEEEESSTTTHHHHHHHHHH--------TTC-----CCE
T ss_pred cCeEEEECCCchHHHHHHHHH------------c---CCCEEEEECCCHHHHHHHHHHHHH--------cCC-----CeE
Confidence 358999999999998876542 1 126788888765544433333221 121 112
Q ss_pred EEeecCCcccc--cccCCCceeEEEe---cccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 018892 110 FFTGVPGSFYG--RLFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 184 (349)
Q Consensus 110 f~~~vpgSFy~--rlfP~~Svh~~~S---s~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra 184 (349)
+ +-+.+.. ..+|++++|.+++ .+.+..+.+.|+..- .. ++..+ ....+....+|+.=.
T Consensus 299 ~---~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~--------~~-~~~~~-----~~l~~~q~~~L~~a~ 361 (429)
T 1sqg_A 299 V---KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW--------LR-RDRDI-----PELAQLQSEILDAIW 361 (429)
T ss_dssp E---EECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHH--------HC-CTTHH-----HHHHHHHHHHHHHHG
T ss_pred E---EeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhh--------cC-CHHHH-----HHHHHHHHHHHHHHH
Confidence 2 2233322 2256789999986 334455555553210 00 11111 222333456777767
Q ss_pred HhhccCceEEEEeccc
Q 018892 185 EELVAEGRMVLTFLGR 200 (349)
Q Consensus 185 ~EL~~GG~mvl~~~g~ 200 (349)
+-|+|||+||+..+..
T Consensus 362 ~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 362 PHLKTGGTLVYATCSV 377 (429)
T ss_dssp GGEEEEEEEEEEESCC
T ss_pred HhcCCCCEEEEEECCC
Confidence 8899999999977543
No 175
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=93.77 E-value=0.25 Score=47.03 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=32.7
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
+|++++|++++....||- .|..+.. ..|++.=.+-|+|||+|++...+
T Consensus 155 ~~~~~fDvIi~D~~~~~~--~~~~L~t---------------------------~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAI--TPQNFTT---------------------------VEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CCTTCEEEEEECCSTTSC--CCGGGSB---------------------------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCCccc--cchhhhH---------------------------HHHHHHHHHhcCCCcEEEEEecC
Confidence 367889999998776662 2333211 23555557889999999998864
No 176
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=93.76 E-value=0.23 Score=43.85 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=16.8
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..++.+.+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~ 97 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSD 97 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHH
Confidence 346899999999998876554
No 177
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=93.75 E-value=0.1 Score=46.03 Aligned_cols=19 Identities=21% Similarity=0.391 Sum_probs=15.6
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.+.
T Consensus 55 ~~~vLdiG~G~G~~~~~la 73 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA 73 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4589999999999877554
No 178
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=93.66 E-value=0.21 Score=46.90 Aligned_cols=127 Identities=14% Similarity=0.012 Sum_probs=62.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..|+.+.+.. .+.-+|+-.|.-..=-.. +. ..... .|- .++
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~--------------~~~~~v~avD~s~~~l~~----a~---~~~~~-~g~-----~~v 171 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLM--------------RNDGVIYAFDVDENRLRE----TR---LNLSR-LGV-----LNV 171 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHT--------------TTCSEEEEECSCHHHHHH----HH---HHHHH-HTC-----CSE
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEcCCHHHHHH----HH---HHHHH-hCC-----CeE
Confidence 3589999999999988654321 123567777743221111 11 11111 121 232
Q ss_pred EEeecCCcccccccCCCceeEEEecc---cccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHSSY---SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~Ss~---alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
- .+-+.+..-..+++++|.+++.. .+.-+.+.|+... . .++.. .....+....+|+.=.+-
T Consensus 172 ~--~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~--------~-~~~~~-----~~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 172 I--LFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKW--------N-RTMDD-----IKFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp E--EESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------CCHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred E--EEECChhhcccccccCCEEEEeCCCCCcccccCChhHhh--------c-CCHHH-----HHHHHHHHHHHHHHHHHh
Confidence 2 22233332222467899998742 1222223343211 0 11111 122334456778777888
Q ss_pred hccCceEEEEecc
Q 018892 187 LVAEGRMVLTFLG 199 (349)
Q Consensus 187 L~~GG~mvl~~~g 199 (349)
|+|||+||+....
T Consensus 236 LkpGG~lv~stcs 248 (315)
T 1ixk_A 236 LKPGGILVYSTCS 248 (315)
T ss_dssp EEEEEEEEEEESC
T ss_pred CCCCCEEEEEeCC
Confidence 9999999997643
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=93.59 E-value=0.17 Score=46.02 Aligned_cols=75 Identities=21% Similarity=0.218 Sum_probs=40.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|+|+||++|..++.+.+.+ + |..+|+.-|.-.. .- +... ..... .+- ..++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~-----------~---~~~~v~~vD~s~~-~~---~~a~---~~~~~-~~~----~~~v 166 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAV-----------G---SSGKVFAYEKREE-FA---KLAE---SNLTK-WGL----IERV 166 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHT-----------T---TTCEEEEECCCHH-HH---HHHH---HHHHH-TTC----GGGE
T ss_pred CCEEEEECCcCCHHHHHHHHHh-----------C---CCcEEEEEECCHH-HH---HHHH---HHHHH-cCC----CCCE
Confidence 4589999999998877554321 1 3467777775221 11 1111 11111 110 0122
Q ss_pred EEeecCCcccccccCCCceeEEEe
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHS 133 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~S 133 (349)
..+.+.+..- +|++++|++++
T Consensus 167 --~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 167 --TIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp --EEECCCGGGC-CSCCSEEEEEE
T ss_pred --EEEECCHHHc-ccCCccCEEEE
Confidence 2244566544 78889999997
No 180
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=93.57 E-value=0.09 Score=44.15 Aligned_cols=20 Identities=20% Similarity=0.116 Sum_probs=16.1
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 34589999999999887543
No 181
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.39 E-value=0.25 Score=43.88 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
+.-+|.|+||++|..++.+.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la 90 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA 90 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH
T ss_pred CCCEEEEEeCchhHHHHHHH
Confidence 35699999999999887543
No 182
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=93.30 E-value=2 Score=41.15 Aligned_cols=29 Identities=10% Similarity=-0.031 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 171 QFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 171 Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
...+++..+|..=.+-|+|||.+++....
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 44678888999989999999999888743
No 183
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.25 E-value=0.21 Score=45.20 Aligned_cols=78 Identities=18% Similarity=0.176 Sum_probs=42.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|..++.+...+ + |..+|+.-|.-.. . ..... .......|.-. .++
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~vD~~~~-~---~~~a~---~~~~~~~g~~~---~~v 155 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAV-----------G---PAGQVISYEQRAD-H---AEHAR---RNVSGCYGQPP---DNW 155 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEECSCHH-H---HHHHH---HHHHHHHTSCC---TTE
T ss_pred CCEEEEEcccccHHHHHHHHHh-----------C---CCCEEEEEeCCHH-H---HHHHH---HHHHHhcCCCC---CcE
Confidence 4589999999999877554321 1 2356777774211 1 11111 11111102000 232
Q ss_pred EEeecCCcccccccCCCceeEEEe
Q 018892 110 FFTGVPGSFYGRLFPRNSVHLFHS 133 (349)
Q Consensus 110 f~~~vpgSFy~rlfP~~Svh~~~S 133 (349)
..+-+.+....+|++++|++++
T Consensus 156 --~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 156 --RLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp --EEECSCGGGCCCCTTCEEEEEE
T ss_pred --EEEECchHhcCCCCCceeEEEE
Confidence 2245666666678899999998
No 184
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=93.19 E-value=0.12 Score=47.29 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=41.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhh-CCCCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 107 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~-~~~~~~~~ 107 (349)
..-+|.|+||++|..++.+...+ .|..+|+.-|.-.. .+....+... .. |. .
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~-------~~~~a~~~~~-~~~g~-----~ 162 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL--------------NGKGTLTVVERDED-------NLKKAMDNLS-EFYDI-----G 162 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------TTSSEEEEECSCHH-------HHHHHHHHHH-TTSCC-----T
T ss_pred CcCEEEEecCCCCHHHHHHHHHc--------------CCCCEEEEEECCHH-------HHHHHHHHHH-hcCCC-----C
Confidence 45699999999999877654422 13357777775221 1111111111 11 21 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEe
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHS 133 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~S 133 (349)
++- .+-+.+.. .+|++++|++++
T Consensus 163 ~v~--~~~~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 163 NVR--TSRSDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp TEE--EECSCTTT-CCCSCCEEEEEE
T ss_pred cEE--EEECchhc-cCcCCCccEEEE
Confidence 322 23455555 678889999997
No 185
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.77 E-value=0.36 Score=51.90 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHh-hCCCCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ-LGSASGAAG 107 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~-~~~~~~~~~ 107 (349)
..-+|.|+||++|..++.+.. .+ +|..+|+.-|+-.. . +..-...+... .....+. .
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr------------~g--~p~a~VtGVDIS~e---m----Le~AReRLa~~lnAkr~gl-~ 778 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLD------------YP--TSLQTIIGVDISPK---G----LARAAKMLHVKLNKEACNV-K 778 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTS------------SC--CCCCEEEEEESCHH---H----HHHHHHHHHHHTTTTCSSC-S
T ss_pred CCCEEEEECCCCCHHHHHHHH------------hC--CCCCeEEEEECCHH---H----HHHHHHHhhhccchhhcCC-C
Confidence 356999999999988764431 11 23457777775321 1 11111111111 0000000 2
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+ +..+-|+...--++++++|+++++.++||+.. | +...||+.=.+-|
T Consensus 779 n--VefiqGDa~dLp~~d~sFDlVV~~eVLeHL~d-p------------------------------~l~~~L~eI~RvL 825 (950)
T 3htx_A 779 S--ATLYDGSILEFDSRLHDVDIGTCLEVIEHMEE-D------------------------------QACEFGEKVLSLF 825 (950)
T ss_dssp E--EEEEESCTTSCCTTSCSCCEEEEESCGGGSCH-H------------------------------HHHHHHHHHHHTT
T ss_pred c--eEEEECchHhCCcccCCeeEEEEeCchhhCCh-H------------------------------HHHHHHHHHHHHc
Confidence 2 22344666666678899999999999999763 1 2234555567889
Q ss_pred ccCceEEEEeccc
Q 018892 188 VAEGRMVLTFLGR 200 (349)
Q Consensus 188 ~~GG~mvl~~~g~ 200 (349)
+|| .+++..+.+
T Consensus 826 KPG-~LIISTPN~ 837 (950)
T 3htx_A 826 HPK-LLIVSTPNY 837 (950)
T ss_dssp CCS-EEEEEECBG
T ss_pred CCC-EEEEEecCc
Confidence 999 777776544
No 186
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=92.75 E-value=1.8 Score=37.44 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=16.5
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la 77 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA 77 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHH
Confidence 35699999999999988654
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=92.68 E-value=0.23 Score=44.14 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=15.8
Q ss_pred eEEEeecCCCCcccHHHHH
Q 018892 31 VAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~ 49 (349)
-+|.|+||++|..|+.+..
T Consensus 58 ~~vLdiG~G~G~~~~~la~ 76 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILN 76 (221)
T ss_dssp CEEEEESTTHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHH
Confidence 4899999999999886543
No 188
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=92.48 E-value=1.5 Score=37.94 Aligned_cols=19 Identities=16% Similarity=0.366 Sum_probs=15.9
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..|+.+.
T Consensus 65 ~~~vLdiG~G~G~~~~~la 83 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMG 83 (225)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHH
Confidence 4589999999999988654
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=92.43 E-value=0.32 Score=46.17 Aligned_cols=130 Identities=18% Similarity=0.105 Sum_probs=68.4
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhH
Q 018892 13 PITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ 92 (349)
Q Consensus 13 ~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~ 92 (349)
+.+..++..+.. ....-+|.|.||++|..++.+.... + |...|+..|.-. ..+ ..-.
T Consensus 189 ~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~-----------~---~~~~v~g~Di~~---~~i----~~a~ 245 (354)
T 3tma_A 189 PVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTL-----------G---PTSPVYAGDLDE---KRL----GLAR 245 (354)
T ss_dssp HHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHH-----------C---TTSCEEEEESCH---HHH----HHHH
T ss_pred HHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhh-----------C---CCceEEEEECCH---HHH----HHHH
Confidence 344444444322 2234689999999999877654432 1 235666666421 111 1111
Q ss_pred HHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHH
Q 018892 93 KILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQF 172 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~ 172 (349)
..... .|- .+ +.-+-+.+..-..|.+++|+++++--.+|... ... +.
T Consensus 246 ~n~~~-~g~-----~~--i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~-----------------~~~--------~~ 292 (354)
T 3tma_A 246 EAALA-SGL-----SW--IRFLRADARHLPRFFPEVDRILANPPHGLRLG-----------------RKE--------GL 292 (354)
T ss_dssp HHHHH-TTC-----TT--CEEEECCGGGGGGTCCCCSEEEECCCSCC---------------------CH--------HH
T ss_pred HHHHH-cCC-----Cc--eEEEeCChhhCccccCCCCEEEECCCCcCccC-----------------Ccc--------cH
Confidence 11111 121 11 22234555554556677899988654443110 011 12
Q ss_pred HHHHHHHHHHhhHhhccCceEEEEec
Q 018892 173 QRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 173 ~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
......+++.=.+-|+|||++++...
T Consensus 293 ~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 293 FHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp HHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 34456777777888999999999863
No 190
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=92.38 E-value=0.47 Score=42.60 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la 82 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA 82 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHH
Confidence 35699999999999987544
No 191
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=92.38 E-value=0.4 Score=48.06 Aligned_cols=128 Identities=12% Similarity=0.136 Sum_probs=67.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|.-|+.+.+.+ .+.-+|+-+|.-..=...+=+++ .. .|- .++
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~--------------~~~g~V~avDis~~~l~~~~~n~-------~r-~g~-----~nv 170 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARM--------------NNEGAILANEFSASRVKVLHANI-------SR-CGI-----SNV 170 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHT--------------TTCSEEEEECSSHHHHHHHHHHH-------HH-HTC-----CSE
T ss_pred CCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHH-------HH-cCC-----CcE
Confidence 4689999999999998765421 12356777775322222211111 11 121 232
Q ss_pred -EEeecCCcccccccCCCceeEEEe---cccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 110 -FFTGVPGSFYGRLFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 110 -f~~~vpgSFy~rlfP~~Svh~~~S---s~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
++.+=...+- . .+++++|.|++ .+.+.-+.+.|+.... .++..+ ....+.-..+|+.=.+
T Consensus 171 ~~~~~D~~~~~-~-~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------~~~~~~-----~~l~~~q~~iL~~a~~ 234 (479)
T 2frx_A 171 ALTHFDGRVFG-A-AVPEMFDAILLDAPCSGEGVVRKDPDALKN---------WSPESN-----QEIAATQRELIDSAFH 234 (479)
T ss_dssp EEECCCSTTHH-H-HSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------CCHHHH-----HHHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHhh-h-hccccCCEEEECCCcCCcccccCCHHHHhh---------cCHhHH-----HHHHHHHHHHHHHHHH
Confidence 2222222211 0 13578999987 3344445556654321 112211 2222333456776678
Q ss_pred hhccCceEEEEeccc
Q 018892 186 ELVAEGRMVLTFLGR 200 (349)
Q Consensus 186 EL~~GG~mvl~~~g~ 200 (349)
-|+|||+||...+..
T Consensus 235 ~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 235 ALRPGGTLVYSTCTL 249 (479)
T ss_dssp HEEEEEEEEEEESCC
T ss_pred hcCCCCEEEEecccC
Confidence 899999999876543
No 192
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=92.29 E-value=0.73 Score=43.11 Aligned_cols=22 Identities=9% Similarity=0.205 Sum_probs=16.8
Q ss_pred HHHHHHhhHhhccCceEEEEec
Q 018892 177 SLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 177 ~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
...|+.=.+-|+|||+|++...
T Consensus 151 ~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 151 TYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEEe
Confidence 3555566788999999999654
No 193
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=92.28 E-value=0.58 Score=44.54 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=16.1
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+.+-+|.|+||++|..+..+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~l 138 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREV 138 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHH
Confidence 45679999999999987644
No 194
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=92.06 E-value=0.87 Score=42.91 Aligned_cols=20 Identities=10% Similarity=0.026 Sum_probs=16.3
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+++-+|.|+||++|..+..+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l 134 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIREL 134 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHH
T ss_pred CCCCEEEEEcCCccHHHHHH
Confidence 34579999999999987754
No 195
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=91.82 E-value=0.46 Score=42.97 Aligned_cols=20 Identities=25% Similarity=0.361 Sum_probs=16.9
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|+|+||++|..++.+.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la 99 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLK 99 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 46799999999999988654
No 196
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=91.70 E-value=0.62 Score=43.32 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.2
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+.+-+|.|+||++|..+..+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l 108 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREV 108 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHH
Confidence 34579999999999987654
No 197
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=91.54 E-value=1.1 Score=41.67 Aligned_cols=116 Identities=11% Similarity=0.067 Sum_probs=57.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHH-hhHhhHHHHHHhhCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFR-SLASFQKILRKQLGSASGAA 106 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~-~l~~~~~~~~~~~~~~~~~~ 106 (349)
+++-+|.|+||++|..+..+.. ..+.-+|..-|+-.. .-.+.+ .++.. . +..+. .
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~---------------~~~~~~V~~VDid~~-vi~~ar~~~~~~-----~--~~~~~-~ 137 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTR---------------HKNVESITMVEIDAG-VVSFCRQYLPNH-----N--AGSYD-D 137 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHT---------------CTTCCEEEEECSCTT-HHHHHHHHCHHH-----H--SSCTT-C
T ss_pred CCCCEEEEEeCChhHHHHHHHh---------------CCCCCEEEEEECCHH-HHHHHHHhhhhc-----c--ccccc-C
Confidence 4567999999999987654321 123356777776432 112222 12110 0 00000 0
Q ss_pred Cc-eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 107 GQ-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 107 ~~-~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
++ -+..+=...|-.. +++++|++++...-+|. |.. ..|. ..|++.=.+
T Consensus 138 ~rv~~~~~D~~~~l~~--~~~~fDvIi~D~~~p~~---~~~-------------------~l~~-------~~f~~~~~~ 186 (294)
T 3adn_A 138 PRFKLVIDDGVNFVNQ--TSQTFDVIISDCTDPIG---PGE-------------------SLFT-------SAFYEGCKR 186 (294)
T ss_dssp TTCCEECSCSCC---C--CCCCEEEEEECC--------------------------------CC-------HHHHHHHHH
T ss_pred CceEEEEChHHHHHhh--cCCCccEEEECCCCccC---cch-------------------hccH-------HHHHHHHHH
Confidence 12 2333333333332 57889999996654441 110 0000 345556678
Q ss_pred hhccCceEEEEec
Q 018892 186 ELVAEGRMVLTFL 198 (349)
Q Consensus 186 EL~~GG~mvl~~~ 198 (349)
-|+|||+|++...
T Consensus 187 ~LkpgG~lv~~~~ 199 (294)
T 3adn_A 187 CLNPGGIFVAQNG 199 (294)
T ss_dssp TEEEEEEEEEEEE
T ss_pred hcCCCCEEEEecC
Confidence 8999999999874
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=91.48 E-value=1.3 Score=43.70 Aligned_cols=128 Identities=10% Similarity=0.081 Sum_probs=64.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|.-|+.+.... + ..-+|+.+|.-..=-..+ . ..... .|- .++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~-----------~---~~~~v~a~D~s~~~l~~~----~---~~~~~-~g~-----~~v 312 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELM-----------K---NKGKIYAFDVDKMRMKRL----K---DFVKR-MGI-----KIV 312 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT-----------T---TCSEEEEECSCHHHHHHH----H---HHHHH-TTC-----CSE
T ss_pred cCEEEEeCCCccHHHHHHHHHc-----------C---CCCEEEEEcCCHHHHHHH----H---HHHHH-cCC-----CcE
Confidence 3589999999999988654321 1 125677777543211111 1 11111 121 233
Q ss_pred EEeecCCcccc--cccCCCceeEEEe---cccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 018892 110 FFTGVPGSFYG--RLFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 184 (349)
Q Consensus 110 f~~~vpgSFy~--rlfP~~Svh~~~S---s~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra 184 (349)
-+ +-+.+-. .-+|++++|.+++ .+++.-+.+.|+..- . . ++..+ ......-..+|+.=.
T Consensus 313 ~~--~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~-------~-~-~~~~~-----~~l~~~q~~iL~~a~ 376 (450)
T 2yxl_A 313 KP--LVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRW-------R-L-REDKI-----NEMSQLQRELLESAA 376 (450)
T ss_dssp EE--ECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHH-------H-C-CTTSH-----HHHHHHHHHHHHHHH
T ss_pred EE--EEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhh-------h-C-CHHHH-----HHHHHHHHHHHHHHH
Confidence 22 2233322 2266688999996 223333344443210 0 0 11111 111222245666667
Q ss_pred HhhccCceEEEEeccc
Q 018892 185 EELVAEGRMVLTFLGR 200 (349)
Q Consensus 185 ~EL~~GG~mvl~~~g~ 200 (349)
+-|+|||+||...+..
T Consensus 377 ~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 377 RLVKPGGRLLYTTCSI 392 (450)
T ss_dssp TTEEEEEEEEEEESCC
T ss_pred HhcCCCcEEEEEeCCC
Confidence 7899999999876543
No 199
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=91.36 E-value=0.17 Score=46.40 Aligned_cols=27 Identities=11% Similarity=0.099 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 174 RDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 174 ~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
.+...+|+.=.+-|+|||+||......
T Consensus 188 ~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 188 LRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp TCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 445677877788899999999987544
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=90.91 E-value=2.1 Score=39.27 Aligned_cols=20 Identities=10% Similarity=0.026 Sum_probs=16.4
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+++-+|.|+||++|..+..+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l 96 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIREL 96 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHH
Confidence 45679999999999987654
No 201
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=90.90 E-value=0.76 Score=42.20 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=16.1
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+++-+|.|+||++|..+..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l 93 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREI 93 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHH
T ss_pred CCCCEEEEECCchHHHHHHH
Confidence 45689999999999876644
No 202
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=90.80 E-value=3.7 Score=39.39 Aligned_cols=29 Identities=10% Similarity=-0.115 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 171 QFQRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 171 Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
+..+++..+|..=.+-|+|||.+++....
T Consensus 309 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 309 AGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 34578888998889999999999887743
No 203
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=90.75 E-value=4.1 Score=39.13 Aligned_cols=27 Identities=15% Similarity=0.283 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhHhhccCceEEEEecc
Q 018892 173 QRDFSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 173 ~~D~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
.+++..++..=.+-|+|||.+++....
T Consensus 307 ~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 307 SKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 456777888778999999999988743
No 204
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=90.69 E-value=0.28 Score=43.51 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=16.6
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|+|+||++|..++.+..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~ 116 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLAR 116 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHH
Confidence 346999999999998875543
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=90.61 E-value=1.6 Score=43.55 Aligned_cols=17 Identities=29% Similarity=0.659 Sum_probs=14.0
Q ss_pred ceEEEeecCCCCcccHH
Q 018892 30 KVAIADLGCSSGPNTLL 46 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~ 46 (349)
.-+|.|+||++|..++.
T Consensus 159 ~~~VLDiGcGtG~la~~ 175 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFF 175 (480)
T ss_dssp TCEEEEESCSTTHHHHH
T ss_pred CCEEEEecCcccHHHHH
Confidence 46999999999986653
No 206
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=90.52 E-value=1.7 Score=37.74 Aligned_cols=20 Identities=30% Similarity=0.351 Sum_probs=16.2
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA 88 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHH
Confidence 34689999999999887654
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=90.50 E-value=2.3 Score=40.14 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 173 QRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 173 ~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
.+|+..+|+.=.+-|+|||.++++....
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 4567778887789999999988877543
No 208
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=90.08 E-value=0.41 Score=44.75 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=62.6
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCC
Q 018892 28 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 107 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~ 107 (349)
+.+-+|.|+||+.|+-|+..+. ..|..+|..-|.- .=.-.+- ...+.. .|.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~---------------~~p~a~y~a~DId-----~~~le~a--~~~l~~-~g~------ 181 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG---------------LPAETVYIASDID-----ARLVGFV--DEALTR-LNV------ 181 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT---------------CCTTCEEEEEESB-----HHHHHHH--HHHHHH-TTC------
T ss_pred CCCceeeeeccCccHHHHHHHh---------------hCCCCEEEEEeCC-----HHHHHHH--HHHHHh-cCC------
Confidence 4577999999999999885432 2355667666632 2111110 011111 121
Q ss_pred ceEEeecCCcccccccCCCceeEEEecccccccccCCCCcC-C-----CCceeEEcCC------CCHHHHHHHHHHHHHH
Q 018892 108 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-S-----NKGNIFMAST------SPPCVLTAYYEQFQRD 175 (349)
Q Consensus 108 ~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~-~-----n~~~i~~~~s------s~~~v~~ay~~Q~~~D 175 (349)
+ +.. .=..+-... |....|++.++=++|-|.+-..+.. . |.+.|.++-. ..+...+-|.++|.++
T Consensus 182 ~-~~~-~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~ 258 (281)
T 3lcv_B 182 P-HRT-NVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQ 258 (281)
T ss_dssp C-EEE-EECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHH
T ss_pred C-ceE-EEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHH
Confidence 1 111 113333333 6777999999999999975443221 1 6677776532 2233455566555544
Q ss_pred H
Q 018892 176 F 176 (349)
Q Consensus 176 ~ 176 (349)
.
T Consensus 259 ~ 259 (281)
T 3lcv_B 259 A 259 (281)
T ss_dssp H
T ss_pred H
Confidence 3
No 209
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=90.05 E-value=0.85 Score=45.58 Aligned_cols=126 Identities=13% Similarity=0.123 Sum_probs=64.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+||++|.-|+.+.+.. + ..-+|+-+|+-..=-..+=+++ .. .|- .
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~-----------~---~~g~V~AvDis~~~l~~a~~n~-------~r-~G~-----~-- 152 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARM-----------G---GKGLLLANEVDGKRVRGLLENV-------ER-WGA-----P-- 152 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT-----------T---TCSEEEEECSCHHHHHHHHHHH-------HH-HCC-----C--
T ss_pred CCEEEEEcCCcCHHHHHHHHhC-----------C---CCCEEEEEECCHHHHHHHHHHH-------HH-cCC-----e--
Confidence 4689999999999998765421 1 1246777774322211111111 11 121 1
Q ss_pred EEeecCCcccccc-cCCCceeEEEe---cccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhH
Q 018892 110 FFTGVPGSFYGRL-FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 185 (349)
Q Consensus 110 f~~~vpgSFy~rl-fP~~Svh~~~S---s~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~ 185 (349)
+..+-+....-. +.++++|.|++ .+.+--+.+.|+... ..++..+ ....+.-..+|+.=.+
T Consensus 153 -v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~---------~~~~~~~-----~~l~~~Q~~iL~~a~~ 217 (464)
T 3m6w_A 153 -LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAAR---------HWGPSAP-----KRMAEVQKALLAQASR 217 (464)
T ss_dssp -CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGG---------GCCTTHH-----HHHHHHHHHHHHHHHT
T ss_pred -EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhh---------hcCHHHH-----HHHHHHHHHHHHHHHH
Confidence 112222222111 23578899984 222333344454321 1122222 2223344667777788
Q ss_pred hhccCceEEEEecc
Q 018892 186 ELVAEGRMVLTFLG 199 (349)
Q Consensus 186 EL~~GG~mvl~~~g 199 (349)
-|+|||+||...+.
T Consensus 218 ~LkpGG~LvysTCs 231 (464)
T 3m6w_A 218 LLGPGGVLVYSTCT 231 (464)
T ss_dssp TEEEEEEEEEEESC
T ss_pred hcCCCcEEEEEecc
Confidence 89999999987644
No 210
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=89.70 E-value=0.96 Score=39.69 Aligned_cols=21 Identities=14% Similarity=0.328 Sum_probs=16.7
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|+|+||++|..++.+.+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~ 111 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSE 111 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHHH
Confidence 346899999999998876554
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=89.56 E-value=0.45 Score=43.83 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=16.6
Q ss_pred CCceEEEeecCCCCcccHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
+.+-+|.|+||++|..+..+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~ 94 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVL 94 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHH
Confidence 345799999999998877543
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=89.27 E-value=0.94 Score=42.67 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=16.1
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+.+-+|.|+||++|..+..+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l 126 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREV 126 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHH
Confidence 34579999999999987654
No 213
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=89.10 E-value=0.88 Score=41.66 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=16.2
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..|+.+.
T Consensus 126 ~~~VLDlgcG~G~~~~~la 144 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA 144 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH
T ss_pred CCEEEEecccCCHHHHHHH
Confidence 4689999999999988664
No 214
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=89.01 E-value=1.4 Score=41.24 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=16.4
Q ss_pred CCceEEEeecCCCCcccHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+++-+|.|+||++|..+..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l 113 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREV 113 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHH
Confidence 45679999999999987644
No 215
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=88.28 E-value=3.4 Score=40.13 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhhHhhccCceEEEEec
Q 018892 170 EQFQRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 170 ~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
....+|+..++..=.+-|+|||++++...
T Consensus 299 ~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 299 PAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 34567888888888899999999985553
No 216
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=86.28 E-value=5.5 Score=41.62 Aligned_cols=29 Identities=28% Similarity=0.280 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 172 FQRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 172 ~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
..+|+..++..=.+-|+|||+|++....+
T Consensus 632 ~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 632 VQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 35677888888789999999999877554
No 217
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=85.10 E-value=0.73 Score=45.92 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhHhhccCceEEEEeccc
Q 018892 173 QRDFSLFLKCRSEELVAEGRMVLTFLGR 200 (349)
Q Consensus 173 ~~D~~~FL~~Ra~EL~~GG~mvl~~~g~ 200 (349)
...-..+|..=.+-|+|||+||...+..
T Consensus 210 ~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 210 QKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 3344577877788899999999876543
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=82.59 E-value=2.3 Score=40.03 Aligned_cols=128 Identities=13% Similarity=0.069 Sum_probs=64.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
...+|.|.||++|.-++.+.+.+ .+. . ....+|+..|+-. .. -.+.. ..... .|.. .+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~----~~~----~--~~~~~v~GiDi~~--~~---~~~a~--~n~~~-~g~~----~~ 187 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL----ELK----G--DVDVHASGVDVDD--LL---ISLAL--VGADL-QRQK----MT 187 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH----HTT----S--SCEEEEEEEESCH--HH---HHHHH--HHHHH-HTCC----CE
T ss_pred CCCEEEeCCCCccHHHHHHHHHH----HHh----c--CCCceEEEEECCH--HH---HHHHH--HHHHh-CCCC----ce
Confidence 56899999999998877655432 111 0 1247788777421 11 11110 00111 1211 12
Q ss_pred eEEeecCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHH-HHHHHHhhHhh
Q 018892 109 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF-SLFLKCRSEEL 187 (349)
Q Consensus 109 ~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~-~~FL~~Ra~EL 187 (349)
+ +-|..... .+...+|+++++--++|.+. ++.... |-... +.. ..|. ..|+..=.+-|
T Consensus 188 i----~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~-~~~~~~-----~~~~~-~~g---------~~~~~~~~l~~~~~~L 246 (344)
T 2f8l_A 188 L----LHQDGLAN-LLVDPVDVVISDLPVGYYPD-DENAKT-----FELCR-EEG---------HSFAHFLFIEQGMRYT 246 (344)
T ss_dssp E----EESCTTSC-CCCCCEEEEEEECCCSEESC-HHHHTT-----STTCC-SSS---------CEEHHHHHHHHHHHTE
T ss_pred E----EECCCCCc-cccCCccEEEECCCCCCcCc-hhhhhh-----ccccC-CCC---------cchHHHHHHHHHHHHh
Confidence 2 23344433 35678999999987776432 100000 00000 000 0112 24565556789
Q ss_pred ccCceEEEEecc
Q 018892 188 VAEGRMVLTFLG 199 (349)
Q Consensus 188 ~~GG~mvl~~~g 199 (349)
+|||+++++++.
T Consensus 247 k~gG~~~~v~p~ 258 (344)
T 2f8l_A 247 KPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEEEEEEG
T ss_pred CCCCEEEEEECc
Confidence 999999999854
No 219
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=77.89 E-value=3.9 Score=37.59 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHH-----------HHHHHHHHHHHHhcCCCCCceEEEeCCCCC
Q 018892 12 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVA-----------SELIKVVNKICDKLGSQLPEFQVFLNDLPG 78 (349)
Q Consensus 12 ~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~-----------~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~ 78 (349)
+|.+++--..++.. +.+-+|.|+||+.|+-++..+ ...|+.+++.....+ +.+.+...|++.
T Consensus 90 Lp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g---~~~~~~v~D~~~ 162 (253)
T 3frh_A 90 LAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKD---WDFTFALQDVLC 162 (253)
T ss_dssp GGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTT---CEEEEEECCTTT
T ss_pred hhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeeccc
Confidence 44555444433332 457799999998888888765 456666666643332 457777777554
No 220
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=75.12 E-value=2.8 Score=38.18 Aligned_cols=51 Identities=18% Similarity=0.361 Sum_probs=37.7
Q ss_pred ceEEEeecCCCCcccHHHHH------------HHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS------------ELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTI 84 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~L 84 (349)
.-+|.|+||++|..|..+.. ..++.+++.... .+.++++..|...-||..+
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGGGS
T ss_pred cCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHHHh
Confidence 45899999999999998874 456666665421 3469999999887776543
No 221
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=74.87 E-value=7.6 Score=39.34 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=69.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCC----CCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCC
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQ----LPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASG 104 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~----~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~ 104 (349)
.+.+|.|.+|++|.--+.+...+.+.-... +.. ....+++..|+ +..--.+... .+.. .|-.
T Consensus 244 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~----~~~~~~~~~~~~i~G~Ei-----d~~~~~lA~~--Nl~l-~gi~-- 309 (544)
T 3khk_A 244 YKGRVYDPAMGSGGFFVSSDKFIEKHANVK----HYNASEQKKQISVYGQES-----NPTTWKLAAM--NMVI-RGID-- 309 (544)
T ss_dssp CSEEEEESSCTTCHHHHHHHHHHHHHHHHH----TSCHHHHGGGEEEEECCC-----CHHHHHHHHH--HHHH-TTCC--
T ss_pred CCCeEeCcccCcCcHHHHHHHHHHHhcccc----ccchHHHhhhceEEEEeC-----CHHHHHHHHH--HHHH-hCCC--
Confidence 345999999999977665555443322111 100 01467777764 2222112110 0111 1111
Q ss_pred CCCceEEeecCCcccccccCCCceeEEEec--ccc-cccccCCCCcCCCCceeEEcC-------CCCHHHHHHHHHHHHH
Q 018892 105 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSS--YSL-QWLSQVPDGLESNKGNIFMAS-------TSPPCVLTAYYEQFQR 174 (349)
Q Consensus 105 ~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss--~al-HWLS~~P~~l~~n~~~i~~~~-------ss~~~v~~ay~~Q~~~ 174 (349)
.++ -...+-+|....++...+|+|+++ |.. .|-... +.. ..+..+.. ..+.. ..
T Consensus 310 --~~i-~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~~-d~r~~~g~~~~~~~~~~~~~---------~~ 373 (544)
T 3khk_A 310 --FNF-GKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEK---LAD-DPRWTINTNGEKRILTPPTG---------NA 373 (544)
T ss_dssp --CBC-CSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGG---GTT-CGGGEECCC--CEECCCCTT---------CT
T ss_pred --ccc-ceeccchhcCcccccccccEEEECCCcCCccccchh---hhh-hhhhhcCcccccccccCCCc---------ch
Confidence 121 112445566667888999999996 433 364321 111 11110110 00110 11
Q ss_pred HHHHHHHHhhHhhccCceEEEEec
Q 018892 175 DFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 175 D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
|+ .||..-.+-|+|||+++++++
T Consensus 374 ~~-~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 374 NF-AWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp HH-HHHHHHHHTEEEEEEEEEEEE
T ss_pred hH-HHHHHHHHHhccCceEEEEec
Confidence 22 488888889999999999984
No 222
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=68.87 E-value=3.9 Score=33.79 Aligned_cols=20 Identities=20% Similarity=0.054 Sum_probs=16.2
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH
Confidence 34689999999999987543
No 223
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=67.58 E-value=8.9 Score=34.33 Aligned_cols=21 Identities=10% Similarity=0.159 Sum_probs=17.7
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|+|+||.+|.-++.+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~ 35 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVE 35 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHH
Confidence 347999999999999887654
No 224
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=66.98 E-value=3.2 Score=36.87 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=16.1
Q ss_pred eEEEeecCCCCcccHHHHH
Q 018892 31 VAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~ 49 (349)
-+|.|+||++|..|+.+.+
T Consensus 83 ~~VLDiG~GtG~~t~~la~ 101 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRD 101 (236)
T ss_dssp SEEEEECCTTSHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHH
Confidence 5899999999999886554
No 225
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=66.96 E-value=81 Score=31.73 Aligned_cols=131 Identities=19% Similarity=0.159 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCc
Q 018892 29 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 108 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~ 108 (349)
...+|.|-+|++|.-.+.+...+. ..+..+++..|+- ..--.+... .+.. .|-.. .+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~------------~~~~~~i~G~Eid-----~~~~~lA~~--Nl~l-~gi~~---~~ 277 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSR------------QPQTVVYFGQELN-----TSTYNLARM--NMIL-HGVPI---EN 277 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCS------------CTTTCEEEEEESC-----HHHHHHHHH--HHHH-TTCCG---GG
T ss_pred CCCEEeecccchhHHHHHHHHHHH------------hccCceEEEEECc-----HHHHHHHHH--HHHH-cCCCc---Cc
Confidence 467999999999988665554321 1124677777742 211111110 0111 11100 11
Q ss_pred eEEeecCCcccc--cccCCCceeEEEec--ccccccccCCCCcCCC----CceeEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 018892 109 CFFTGVPGSFYG--RLFPRNSVHLFHSS--YSLQWLSQVPDGLESN----KGNIFMASTSPPCVLTAYYEQFQRDFSLFL 180 (349)
Q Consensus 109 ~f~~~vpgSFy~--rlfP~~Svh~~~Ss--~alHWLS~~P~~l~~n----~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL 180 (349)
+-.-.+-+|.. ..++...+|+|+++ |...|-.. .....+. -|. +...+ ..|+ .|+
T Consensus 278 -~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~G~--~~~~s------------~~~~-~Fl 340 (542)
T 3lkd_A 278 -QFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPFGK--LAPKS------------KADF-AFL 340 (542)
T ss_dssp -EEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGGSS--CCCTT------------CCHH-HHH
T ss_pred -cceEecceecccccccccccccEEEecCCcCCccccc-hhhhhhhhhhhhhh--cCCCc------------hhhH-HHH
Confidence 11123334443 34677899999997 55666221 1101110 010 01111 1133 477
Q ss_pred HHhhHhhc-cCceEEEEecc
Q 018892 181 KCRSEELV-AEGRMVLTFLG 199 (349)
Q Consensus 181 ~~Ra~EL~-~GG~mvl~~~g 199 (349)
..-.+-|+ +||++.++++.
T Consensus 341 ~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 341 LHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHHHTBCTTTCEEEEEEET
T ss_pred HHHHHHhCCCceeEEEEecc
Confidence 77788899 99999999853
No 226
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=65.62 E-value=10 Score=34.45 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=17.7
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|+|+||.+|.-++.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~ 41 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVK 41 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHH
Confidence 347999999999999887664
No 227
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=63.82 E-value=3.4 Score=35.75 Aligned_cols=21 Identities=24% Similarity=0.305 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..++.+.+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~ 93 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSD 93 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHH
Confidence 346899999999998876554
No 228
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=62.97 E-value=12 Score=33.56 Aligned_cols=21 Identities=10% Similarity=0.219 Sum_probs=17.8
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
+.-+|+|+||.+|.-++.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~ 41 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQ 41 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHH
Confidence 357999999999999987665
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=61.30 E-value=6 Score=33.90 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=17.2
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|.-|..+.+
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~ 45 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNS 45 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTT
T ss_pred CCCEEEEEeecCCHHHHHHHH
Confidence 457999999999998876544
No 230
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=61.29 E-value=5.2 Score=36.47 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=17.5
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
..-+|.|+||++|.-|..+.+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~ 95 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR 95 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS
T ss_pred CCCEEEEeCcCCCHHHHHHHHc
Confidence 3579999999999988766543
No 231
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=60.83 E-value=6.9 Score=33.09 Aligned_cols=19 Identities=26% Similarity=0.342 Sum_probs=15.6
Q ss_pred CceEEEeecCCCCcccHHH
Q 018892 29 TKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~ 47 (349)
..-+|.|+||++|..++.+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l 67 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGA 67 (207)
T ss_dssp TTCEEEEETCTTCHHHHHH
T ss_pred CcCEEEEeeCCCCHHHHHH
Confidence 3468999999999987755
No 232
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=59.70 E-value=3.3 Score=35.58 Aligned_cols=19 Identities=21% Similarity=0.039 Sum_probs=15.8
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 3589999999999988653
No 233
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=59.35 E-value=13 Score=34.07 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=32.1
Q ss_pred EEEeecCCCCcccHHHHHH------------HHHHHHHHHHhcCCCCCceEEEeCCCCCCchH
Q 018892 32 AIADLGCSSGPNTLLVASE------------LIKVVNKICDKLGSQLPEFQVFLNDLPGNDFN 82 (349)
Q Consensus 32 ~iaD~Gcs~G~Ns~~~~~~------------ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn 82 (349)
+|.|+||++|.-|..+.+. .++.+++... ...++++..|.-.-||.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~-----~~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS-----GLPVRLVFQDALLYPWE 106 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT-----TSSEEEEESCGGGSCGG
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCCEEEEECChhhCChh
Confidence 9999999999999988764 3445554431 13588888886555543
No 234
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=58.96 E-value=45 Score=35.73 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=20.0
Q ss_pred HHHHHHHhhHhhccCceEEEEecc
Q 018892 176 FSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 176 ~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
...|+..=.+-|++||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556888888889999999999853
No 235
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=58.88 E-value=6.5 Score=33.18 Aligned_cols=17 Identities=0% Similarity=-0.062 Sum_probs=11.4
Q ss_pred CceeEEEeccccccccc
Q 018892 126 NSVHLFHSSYSLQWLSQ 142 (349)
Q Consensus 126 ~Svh~~~Ss~alHWLS~ 142 (349)
+++|+++++-.+||++.
T Consensus 109 ~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp CCEEEEEECCCC-----
T ss_pred CCeeEEEECCCchhccC
Confidence 78999999999999763
No 236
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=58.27 E-value=8.1 Score=35.56 Aligned_cols=49 Identities=20% Similarity=0.189 Sum_probs=32.7
Q ss_pred ceEEEeecCCCCcccHHHHHHH----------------HHHHHHHHHhcCCCCCceEEEeCCCCCCchHHH
Q 018892 30 KVAIADLGCSSGPNTLLVASEL----------------IKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTI 84 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~i----------------i~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~L 84 (349)
.-+|.|+||++|.-|..+.... ++.+++.. .+.++++..|.-.-||..+
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~------~~~v~~i~~D~~~~~~~~~ 107 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF------GELLELHAGDALTFDFGSI 107 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH------GGGEEEEESCGGGCCGGGG
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc------CCCcEEEECChhcCChhHh
Confidence 4689999999999999887643 22222221 2357888888766666543
No 237
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=57.92 E-value=8.1 Score=35.42 Aligned_cols=22 Identities=36% Similarity=0.617 Sum_probs=17.5
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
..-+|.|+||++|.-|..+.+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~ 103 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ 103 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS
T ss_pred CCCEEEEeccCCCHHHHHHHHc
Confidence 3579999999999988766543
No 238
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=57.46 E-value=21 Score=32.48 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=17.8
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..|..+..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 346899999999999997764
No 239
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=57.29 E-value=6.2 Score=36.75 Aligned_cols=22 Identities=23% Similarity=0.438 Sum_probs=17.7
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
..-+|.|+||++|.-|..+.+.
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~ 103 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL 103 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS
T ss_pred CCCEEEEEcCCCCHHHHHHHhc
Confidence 3479999999999988766543
No 240
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=55.85 E-value=12 Score=34.82 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=15.9
Q ss_pred HHHHhhHhhccCceEEEEecc
Q 018892 179 FLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 179 FL~~Ra~EL~~GG~mvl~~~g 199 (349)
.|..-.+-|+|||.|++.+..
T Consensus 173 ~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp HHHHHHHHCCTTCEEEEEESC
T ss_pred HHHHHHHHhCCCCEEEEEeCC
Confidence 555556889999999986643
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=55.04 E-value=6.6 Score=34.80 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=17.9
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..|..+..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHH
Confidence 456899999999999997764
No 242
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=54.79 E-value=8.8 Score=34.19 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..|..+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 346899999999999887654
No 243
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=54.20 E-value=73 Score=29.89 Aligned_cols=105 Identities=11% Similarity=0.069 Sum_probs=57.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCce
Q 018892 30 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 109 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~ 109 (349)
.-+|.|+| ++|..++.+.. . + |.-+|+.-|+-. ..+..-.+.... .|- .+
T Consensus 173 ~~~VLDlG-G~G~~~~~la~--------~----~---~~~~v~~vDi~~-------~~l~~a~~~~~~-~g~-----~~- 222 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALML--------S----G---LPKRIAVLDIDE-------RLTKFIEKAANE-IGY-----ED- 222 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHH--------H----T---CCSEEEEECSCH-------HHHHHHHHHHHH-HTC-----CC-
T ss_pred CCEEEEEC-CCCHHHHHHHH--------h----C---CCCEEEEEECCH-------HHHHHHHHHHHH-cCC-----CC-
Confidence 46899999 99998875432 1 1 235677777522 111111111111 121 12
Q ss_pred EEeecCCcccccc--cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 018892 110 FFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 187 (349)
Q Consensus 110 f~~~vpgSFy~rl--fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 187 (349)
+..+.|.+...+ .+++++|+++++.-+|+. +...||+.=.+-|
T Consensus 223 -v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~----------------------------------~~~~~l~~~~~~L 267 (373)
T 2qm3_A 223 -IEIFTFDLRKPLPDYALHKFDTFITDPPETLE----------------------------------AIRAFVGRGIATL 267 (373)
T ss_dssp -EEEECCCTTSCCCTTTSSCBSEEEECCCSSHH----------------------------------HHHHHHHHHHHTB
T ss_pred -EEEEEChhhhhchhhccCCccEEEECCCCchH----------------------------------HHHHHHHHHHHHc
Confidence 233455655432 124689999886433220 1256777767889
Q ss_pred ccCceE-EEEecc
Q 018892 188 VAEGRM-VLTFLG 199 (349)
Q Consensus 188 ~~GG~m-vl~~~g 199 (349)
+|||++ ++.+..
T Consensus 268 kpgG~~~~~~~~~ 280 (373)
T 2qm3_A 268 KGPRCAGYFGITR 280 (373)
T ss_dssp CSTTCEEEEEECT
T ss_pred ccCCeEEEEEEec
Confidence 999965 555543
No 244
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=54.01 E-value=6.3 Score=34.81 Aligned_cols=20 Identities=40% Similarity=0.667 Sum_probs=16.5
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
+.-+|.|+||++|..++.+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la 68 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLS 68 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 45789999999999887554
No 245
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=52.97 E-value=8.9 Score=34.65 Aligned_cols=54 Identities=11% Similarity=0.029 Sum_probs=32.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHH----------HHHHHHHhcCCCCCceEEEeCCCCCCchHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVASELIK----------VVNKICDKLGSQLPEFQVFLNDLPGNDFNTIF 85 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ii~----------~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF 85 (349)
.-+|.|+||++|..|. + ...-+ .+-+..++.-...+.++++..|.-.-||..+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l-~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-P-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp TCCEEEECCTTTTTHH-H-HHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHH
T ss_pred cCEEEEECCCCcHHHH-h-hhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhh
Confidence 3579999999999999 3 33110 11111111111124689999998888887655
No 246
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=50.83 E-value=26 Score=32.05 Aligned_cols=65 Identities=25% Similarity=0.322 Sum_probs=34.9
Q ss_pred cccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCceEEEEec
Q 018892 121 RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 121 rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
+.+|++|+|+++++ |+-.... -|..........+.| ..+-.++..+++.=.+-|+|||.+++...
T Consensus 34 ~~l~~~s~DlIvtd---------PPY~~~~---~y~~~~~~~~~~~~~-~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 34 ASFPEASVHLVVTS---------PPYWTLK---RYEDTPGQLGHIEDY-EAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp TTSCTTCEEEEEEC---------CCCCCCC----------CCHHHHHH-HHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhCCCCceeEEEEC---------CCCCCcc---ccCCChhhhcccccH-HHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 34688999999885 5543210 010000000111112 22334455566655678999999999875
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=50.15 E-value=18 Score=33.27 Aligned_cols=20 Identities=20% Similarity=0.496 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
.-+|.|+||++|..|..+..
T Consensus 43 ~~~VLDiG~G~G~lt~~La~ 62 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLP 62 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTT
T ss_pred cCEEEEEcCcCcHHHHHHHh
Confidence 45899999999999987653
No 248
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=49.15 E-value=6.3 Score=35.04 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
+-+|.|+||++|..|+.+..
T Consensus 61 ~~~VLDiG~G~G~~t~~la~ 80 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSL 80 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHH
T ss_pred cCEEEEeeCCcCHHHHHHHH
Confidence 45999999999999886543
No 249
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=48.47 E-value=8.4 Score=34.86 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.1
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-+|.|+||++|..|+.+..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~ 139 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAK 139 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHH
T ss_pred CCCEEEEecCcCCHHHHHHHH
Confidence 346899999999999986653
No 250
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=48.35 E-value=7.3 Score=35.64 Aligned_cols=19 Identities=37% Similarity=0.475 Sum_probs=15.7
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la 142 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA 142 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHH
Confidence 3589999999999887654
No 251
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=48.05 E-value=21 Score=31.26 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=17.6
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
++-+|.|+||++|..++.+..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~ 90 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTAL 90 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 356999999999999987665
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=47.91 E-value=7.2 Score=39.43 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcccHHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
+++++|.|+||+.|..|..+..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~ 86 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLAS 86 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHh
Confidence 4679999999999998887654
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=47.45 E-value=26 Score=32.46 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.0
Q ss_pred ceEEEeecCCCCcccHHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
.-+|.|+||++|..|..+...
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~ 71 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN 71 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH
T ss_pred cCEEEEECCCchHHHHHHHhc
Confidence 458999999999999988763
No 254
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=46.70 E-value=13 Score=34.07 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=22.4
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHH
Q 018892 11 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLV 47 (349)
Q Consensus 11 ~~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~ 47 (349)
+--.|+++....+. .+ ..+|.|+|||.|..|..+
T Consensus 63 a~~KL~ei~ek~~l--~~-g~~VvDLGaapGGWSq~~ 96 (267)
T 3p8z_A 63 GSAKLQWFVERNMV--IP-EGRVIDLGCGRGGWSYYC 96 (267)
T ss_dssp HHHHHHHHHHTTSS--CC-CEEEEEESCTTSHHHHHH
T ss_pred HHHHHHHHHHhcCC--CC-CCEEEEcCCCCCcHHHHH
Confidence 33455666554422 33 459999999999997643
No 255
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=44.70 E-value=15 Score=34.05 Aligned_cols=20 Identities=30% Similarity=0.519 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
.-+|.|||||.|.-|..++.
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~ 94 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAA 94 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHT
T ss_pred CCEEEEecCCCCHHHHHHHH
Confidence 45899999999999875543
No 256
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=43.97 E-value=6 Score=35.68 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=30.7
Q ss_pred ceEEEeecCCCCcccHHHHHHH---------HHHHHHHHHhcCCCCCceEEEeCCCCCCchHH
Q 018892 30 KVAIADLGCSSGPNTLLVASEL---------IKVVNKICDKLGSQLPEFQVFLNDLPGNDFNT 83 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~i---------i~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~ 83 (349)
.-+|.|+||++|..|..+.+.- =..+-+..++. ....++++..|.-.-||..
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEEECSCTTTCCGGG
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEEEEcchhhCChhH
Confidence 4589999999999998776541 01111111111 1234777777766655543
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=43.75 E-value=20 Score=33.90 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=19.7
Q ss_pred HHHHHHHhhHhhccCceEEEEecc
Q 018892 176 FSLFLKCRSEELVAEGRMVLTFLG 199 (349)
Q Consensus 176 ~~~FL~~Ra~EL~~GG~mvl~~~g 199 (349)
+..||+.=.+-|+|||++++.++.
T Consensus 143 ~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 143 YGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHhCCCCEEEEEECh
Confidence 457787777889999999999864
No 258
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=43.46 E-value=13 Score=35.04 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=22.1
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHH
Q 018892 11 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLL 46 (349)
Q Consensus 11 ~~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~ 46 (349)
+--.|++++...+. .+ .-+|.|+|||.|..|..
T Consensus 79 ~~~KL~ei~~~~~l--~~-~~~VlDLGaapGGwsq~ 111 (321)
T 3lkz_A 79 GTAKLRWLVERRFL--EP-VGKVIDLGCGRGGWCYY 111 (321)
T ss_dssp HHHHHHHHHHTTSC--CC-CEEEEEETCTTCHHHHH
T ss_pred HHHHHHHHHHhcCC--CC-CCEEEEeCCCCCcHHHH
Confidence 33456666665322 23 34999999999999763
No 259
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=43.39 E-value=11 Score=34.22 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=20.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVASEL 51 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~i 51 (349)
.+.++|+|+||++|.|++..+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 367999999999999999887755
No 260
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=42.90 E-value=5.9 Score=33.81 Aligned_cols=19 Identities=16% Similarity=0.041 Sum_probs=15.8
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
+-+|.|+||++|..|+.+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la 75 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA 75 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH
Confidence 4689999999999887543
No 261
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=42.57 E-value=39 Score=30.71 Aligned_cols=50 Identities=10% Similarity=0.002 Sum_probs=31.4
Q ss_pred cCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhhHhhccCc--eEEEEecc
Q 018892 123 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEG--RMVLTFLG 199 (349)
Q Consensus 123 fP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG--~mvl~~~g 199 (349)
+|++++|+++|..+ |+... | ..+.+. .+ ..|+.-.+-|+||| .|++....
T Consensus 144 l~~~~fD~Vvsd~~-~~~~~-~-------------------~~d~~~-----~l-~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 144 MEPFQADTVLCDIG-ESNPT-A-------------------AVEASR-----TL-TVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCCCSEEEECCC-CCCSC-H-------------------HHHHHH-----HH-HHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCCCcCEEEECCC-cCCCc-h-------------------hhhHHH-----HH-HHHHHHHHHhccCCCcEEEEEeCC
Confidence 67889999999877 55221 1 001110 01 15666667899999 99987655
No 262
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=42.08 E-value=22 Score=37.46 Aligned_cols=45 Identities=18% Similarity=0.301 Sum_probs=28.1
Q ss_pred CceEEeecCCcc-cccccCCCceeEEEecccccccccCCCCcC-CCCceeEEcCC
Q 018892 107 GQCFFTGVPGSF-YGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMAST 159 (349)
Q Consensus 107 ~~~f~~~vpgSF-y~rlfP~~Svh~~~Ss~alHWLS~~P~~l~-~n~~~i~~~~s 159 (349)
-.+-++-.-||| .+.|+|. .+|-+ -+||. |.++. ..+..+|+.--
T Consensus 496 VDIIVSElmGsfl~nEL~pe-~Ld~v-----~r~Lk--p~Gi~iP~~~t~ylaPi 542 (745)
T 3ua3_A 496 PDIIVSELLGSFGDNELSPE-CLDGV-----TGFLK--PTTISIPQKYTSYVKPI 542 (745)
T ss_dssp CSEEEECCCBTTBGGGSHHH-HHHTT-----GGGSC--TTCEEESCEEEEEEEEE
T ss_pred ccEEEEeccccccchhccHH-HHHHH-----HHhCC--CCcEEECCccEEEEEEe
Confidence 468888888888 4666665 44433 47886 44432 35666776643
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=40.24 E-value=15 Score=34.17 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=23.3
Q ss_pred HHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHH
Q 018892 14 ITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 14 ~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
++++++..+.. ...-+|.|+||++|..|+.+.+.
T Consensus 14 Ll~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~ 47 (301)
T 1m6y_A 14 MVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEH 47 (301)
T ss_dssp THHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHH
Confidence 34555544422 12358999999999999988765
No 264
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=40.19 E-value=11 Score=35.21 Aligned_cols=20 Identities=35% Similarity=0.564 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
.-+|.|||||.|..|..++.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~ 110 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAAS 110 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHH
Confidence 45899999999999876553
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=40.05 E-value=23 Score=36.64 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=18.4
Q ss_pred CCceEEEeecCCCCcccHHHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
.+..+|+|.||++|+-+...++.
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A 378 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRA 378 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHH
T ss_pred CCCcEEEEECCCCcHHHHHHHHH
Confidence 45789999999999987666554
No 266
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=39.77 E-value=48 Score=29.91 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=16.5
Q ss_pred HHHHhhHhhccCc--eEEEEecc
Q 018892 179 FLKCRSEELVAEG--RMVLTFLG 199 (349)
Q Consensus 179 FL~~Ra~EL~~GG--~mvl~~~g 199 (349)
.|+.-.+-|+||| .|++....
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCeEEEEEeCC
Confidence 5666667899999 99987655
No 267
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=39.72 E-value=15 Score=33.94 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=16.2
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
--+|.|+||++|+.|+.+.
T Consensus 126 g~~VlD~~aG~G~~~i~~a 144 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA 144 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH
T ss_pred CCEEEEecCcCcHHHHHHH
Confidence 3589999999999998664
No 268
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=38.89 E-value=17 Score=30.77 Aligned_cols=32 Identities=6% Similarity=0.024 Sum_probs=20.6
Q ss_pred HHHHHhhcccCCCCceEEEeecCCCCc-ccHHH
Q 018892 16 EEAMTKLFCSTSPTKVAIADLGCSSGP-NTLLV 47 (349)
Q Consensus 16 ~~ai~~~~~~~~~~~~~iaD~Gcs~G~-Ns~~~ 47 (349)
.+.+.+........+-+|+|+||+.|. |+..+
T Consensus 22 ~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~L 54 (153)
T 2k4m_A 22 WNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYI 54 (153)
T ss_dssp HHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEccCCChHHHHHH
Confidence 445554433222335799999999995 87654
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=37.32 E-value=26 Score=34.19 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=31.5
Q ss_pred ceEEEeecCCCCcccHHHHH------------HHHHHHHHHHHhc--CCCCCceEEEeCCCC
Q 018892 30 KVAIADLGCSSGPNTLLVAS------------ELIKVVNKICDKL--GSQLPEFQVFLNDLP 77 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~------------~ii~~i~~~~~~~--~~~~p~~~v~~nDlP 77 (349)
.-+|+|+||++|..++.+.. ..++..++..+.. |. ..++++..|..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~ 153 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFK 153 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGG
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHH
Confidence 36899999999999987653 3556666655443 32 34778877753
No 270
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=37.27 E-value=21 Score=33.54 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=18.2
Q ss_pred CCceEEEeecCCCCcccHHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
...-+|.|+|||.|..|-.+++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~ 101 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAA 101 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHT
T ss_pred CCCCEEEEcCCCCCHHHHHHHH
Confidence 4568999999999999876654
No 271
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=36.95 E-value=10 Score=33.69 Aligned_cols=21 Identities=19% Similarity=0.235 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
++-+|.|+||++|..++.+..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~ 99 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATAL 99 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHH
Confidence 346999999999999886543
No 272
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=36.64 E-value=27 Score=33.85 Aligned_cols=19 Identities=37% Similarity=0.433 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|+|+||++|..++.+.
T Consensus 287 ~~~VLDlgcG~G~~~~~la 305 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLA 305 (433)
T ss_dssp TCEEEEESCTTTTTHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 3589999999999998765
No 273
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=36.39 E-value=12 Score=32.76 Aligned_cols=19 Identities=21% Similarity=0.361 Sum_probs=15.8
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
+-+|.|+||++|..++.+.
T Consensus 73 ~~~vLdiG~G~G~~~~~la 91 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA 91 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 4589999999999887654
No 274
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=34.74 E-value=23 Score=24.04 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=22.3
Q ss_pred CceEEeecCCcccccccCCCceeEE
Q 018892 107 GQCFFTGVPGSFYGRLFPRNSVHLF 131 (349)
Q Consensus 107 ~~~f~~~vpgSFy~rlfP~~Svh~~ 131 (349)
.++..-.+.+.||=|++|+++|+=.
T Consensus 6 ~~~~~~~~~~Gf~LqI~PdG~V~GT 30 (48)
T 3ol0_A 6 HPVLLKSTETGQYLRINPDGTVDGT 30 (48)
T ss_dssp CCEEEEETTTCCEEEECTTSBEEEE
T ss_pred CcchheeccCcEEeEECCCCCCccc
Confidence 5788888999999999999999865
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=33.28 E-value=13 Score=33.71 Aligned_cols=19 Identities=21% Similarity=0.337 Sum_probs=16.2
Q ss_pred eEEEeecCCCCcccHHHHH
Q 018892 31 VAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 31 ~~iaD~Gcs~G~Ns~~~~~ 49 (349)
-+|.|+||++|..|+.+.+
T Consensus 85 ~~VLDlgcG~G~~a~~lA~ 103 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLAS 103 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CeEEEeeCccCHHHHHHHH
Confidence 5899999999999987654
No 276
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=32.86 E-value=20 Score=33.94 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=15.7
Q ss_pred CceEEEeecCCCCcccHHHH
Q 018892 29 TKVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 29 ~~~~iaD~Gcs~G~Ns~~~~ 48 (349)
..-+|.|+||++|..++.+.
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a 236 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELA 236 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHH
T ss_pred CCCEEEEccCcCcHHHHHHH
Confidence 34689999999998876543
No 277
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=32.85 E-value=56 Score=30.24 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.5
Q ss_pred ceEEEeecCCCCcccHHHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
.-+|.|+||+.|.-|+.+.+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~ 123 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAAL 123 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHH
Confidence 358999999999999876653
No 278
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=32.58 E-value=20 Score=34.64 Aligned_cols=92 Identities=18% Similarity=0.104 Sum_probs=55.1
Q ss_pred HHhHHHHHHHHHhhcc-----cCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHH
Q 018892 9 SIAKPITEEAMTKLFC-----STSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNT 83 (349)
Q Consensus 9 ~~~~~~l~~ai~~~~~-----~~~~~~~~iaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~ 83 (349)
+++.=.|+||+..... .....-.+++|+|||.|+=|-.+++. | ..|+--|.-.
T Consensus 186 SRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r------------g-----~~V~aVD~~~----- 243 (375)
T 4auk_A 186 SRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR------------N-----MWVYSVDNGP----- 243 (375)
T ss_dssp CTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT------------T-----CEEEEECSSC-----
T ss_pred CHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC------------C-----CEEEEEEhhh-----
Confidence 4455568888876521 11234589999999999998765431 2 4678888421
Q ss_pred HHHhhHhhHHHHHHhhCCCCCCCCceEEeecCCcccccccCCCceeEEEecccccc
Q 018892 84 IFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQW 139 (349)
Q Consensus 84 LF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~rlfP~~Svh~~~Ss~alHW 139 (349)
|.. ++... +++ .-+-+..+....+.+.+|.++|=.+.+|
T Consensus 244 ----l~~---~l~~~--------~~V--~~~~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 244 ----MAQ---SLMDT--------GQV--TWLREDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp ----CCH---HHHTT--------TCE--EEECSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred ----cCh---hhccC--------CCe--EEEeCccccccCCCCCcCEEEEcCCCCh
Confidence 111 11110 232 2245677777777788999988655443
No 279
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=32.11 E-value=26 Score=30.70 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+|+-+-+-++.|+.+|.|+++..+ +-.+..+++|+-+.|++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~~---~i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAMD---SLVVVDNVEAALEACAP 198 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHHH---TSEEESSHHHHHHHHSC
T ss_pred cchHHHHHHHHHHHCCCCCHHHCC---eEEEeCCHHHHHHHHhc
Confidence 577787888899999999999766 45678999999888875
No 280
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=30.96 E-value=59 Score=28.71 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+|+-+-.-++.|+.+|.|+++..+. -.+..+++|+-+.+++
T Consensus 172 ~w~~l~~~l~~~~~~Gfi~~~~~~~---~~~~~~~~e~~~~l~~ 212 (217)
T 1wek_A 172 YWEGLVRWLAFLRDQKAVGPEDLQL---FRLTDEPEEVVQALKA 212 (217)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTGGGG---SEEESCHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHHHH
Confidence 6877777779999999999998764 4788999999988874
No 281
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=30.05 E-value=51 Score=30.58 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=14.6
Q ss_pred ceEEEeecCCCCcccHH
Q 018892 30 KVAIADLGCSSGPNTLL 46 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~ 46 (349)
.-+|.|+||++|..++.
T Consensus 196 ~~~VLDlg~G~G~~~l~ 212 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA 212 (336)
T ss_dssp TCEEEETTCTTSHHHHH
T ss_pred CCEEEEccCccCHHHHh
Confidence 45899999999998874
No 282
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=29.45 E-value=23 Score=33.71 Aligned_cols=25 Identities=12% Similarity=-0.003 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhHhhccCceEEEEec
Q 018892 174 RDFSLFLKCRSEELVAEGRMVLTFL 198 (349)
Q Consensus 174 ~D~~~FL~~Ra~EL~~GG~mvl~~~ 198 (349)
+++..+|..-.+-|+|||.+++...
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3556677777889999999988773
No 283
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=29.01 E-value=29 Score=34.25 Aligned_cols=117 Identities=18% Similarity=0.192 Sum_probs=63.4
Q ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHHHHHhhHhhHHHHHHhhCCCCCCCCceEEeecCCcccccc
Q 018892 43 NTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRL 122 (349)
Q Consensus 43 Ns~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~LF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~rl 122 (349)
..+.-++.-++.+.+.........++ .+.+-|||.|.=...+..+..+.+..... + .++++.|+|||.-+..
T Consensus 17 ~~~~~~~~~~~~~~~~l~~~~~~g~d-~lgw~~lp~~~~~~~~~~i~~~a~~v~~~----~---~~VV~IGIGGS~LG~~ 88 (445)
T 1b0z_A 17 NELDYLSEFVKAAHHMLHERKGPGSD-FLGWVDWPIRYDKNEFSRIKQAAERIRNH----S---DALVVIGIGGSYLGAR 88 (445)
T ss_dssp HHHHHTHHHHHHHHHHHHTTCSTTGG-GBTTTTHHHHSCHHHHHHHHHHHHHHHHH----C---SEEEEECCGGGTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcc-ccCcccCCccCCHHHHHHHHHHHHHHHhc----C---CEEEEEecChhHHHHH
Confidence 34444444444444443221112233 35668888764457777787776666542 3 6899999999987655
Q ss_pred c------CC--------CceeEEEecccccccccCCCCcCCCCce--eEEcCCC-CHHHHHHH
Q 018892 123 F------PR--------NSVHLFHSSYSLQWLSQVPDGLESNKGN--IFMASTS-PPCVLTAY 168 (349)
Q Consensus 123 f------P~--------~Svh~~~Ss~alHWLS~~P~~l~~n~~~--i~~~~ss-~~~v~~ay 168 (349)
+ |. -.++|+.|+..=..+.+++..+.. +.. |.+++|. ..|...++
T Consensus 89 ~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~-~~TlviviSKSGtT~ET~~~~ 150 (445)
T 1b0z_A 89 AAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEG-KDLSINVISKSGTTTEPAIAF 150 (445)
T ss_dssp HHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTT-CCEEEEEECSSSCCHHHHHHH
T ss_pred HHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCc-CcEEEEEEeCCCCCHHHHHHH
Confidence 4 22 246777677554444444444422 222 4466544 34444443
No 284
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=26.69 E-value=42 Score=29.65 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+|+-|.+-++.|+.+|.|+++..+ +-.+..+++|+-+.|++
T Consensus 150 ~w~~l~~~l~~~~~~Gfi~~~~~~---~~~~~d~~ee~~~~l~~ 190 (215)
T 2a33_A 150 YYNSLLSFIDKAVEEGFISPTARE---IIVSAPTAKELVKKLEE 190 (215)
T ss_dssp TTHHHHHHHHHHHHHTSSCHHHHT---TEEEESSHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHcCCCCHHHCC---eEEEeCCHHHHHHHHHH
Confidence 577787888999999999999866 45788999999999975
No 285
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=26.53 E-value=25 Score=34.26 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=15.9
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018892 30 KVAIADLGCSSGPNTLLVA 48 (349)
Q Consensus 30 ~~~iaD~Gcs~G~Ns~~~~ 48 (349)
.-+|.|+||++|..++.+.
T Consensus 291 ~~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp SSEEEEETCTTTHHHHHHH
T ss_pred CCEEEEeeccchHHHHHHH
Confidence 3589999999999988654
No 286
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=26.34 E-value=20 Score=33.15 Aligned_cols=22 Identities=27% Similarity=0.474 Sum_probs=17.6
Q ss_pred CCceEEEeecCCCCcccHHHHH
Q 018892 28 PTKVAIADLGCSSGPNTLLVAS 49 (349)
Q Consensus 28 ~~~~~iaD~Gcs~G~Ns~~~~~ 49 (349)
..-.+|+|||||-|.=|..+.+
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~ 93 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAAT 93 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTT
T ss_pred CCCCEEEEcCCCCCHHHHHHhh
Confidence 3469999999999998775544
No 287
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=24.80 E-value=33 Score=26.10 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCcchh----hhccCCcCcccCCHHHHHHHHhh
Q 018892 215 ELLATALNNMVSEGLIEEE----KVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 215 ~~l~~al~~mv~eG~i~~e----~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
..+..+|..|..+|+|... .-.......|..+.+++...++.
T Consensus 48 ~tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 48 NDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 4589999999999999876 33344444457888888777663
No 288
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=24.10 E-value=49 Score=28.56 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+|+-+-+-++.|+.+|.|+++..+. -.+..+++|+.+.+++
T Consensus 138 ~~~~l~~~l~~~~~~Gfi~~~~~~~---~~~~~~~~e~~~~l~~ 178 (191)
T 1t35_A 138 YFEPMMKMVKYSIQEGFSNESHLKL---IHSSSRPDELIEQMQN 178 (191)
T ss_dssp TTHHHHHHHHHHHHTTSSCTTHHHH---EEEESSHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHHHH
Confidence 5777777778999999999998764 5678999999999875
No 289
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=22.54 E-value=48 Score=26.32 Aligned_cols=53 Identities=13% Similarity=0.160 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHH-HHHHhhCCceEEEEEEEEe
Q 018892 215 ELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEI-KSEVIKEGSFTIDHLEVSE 269 (349)
Q Consensus 215 ~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~-~~~ie~~GsF~i~~~e~~~ 269 (349)
..|.++|++|+.+|.|+++.... -+-.|..+..|. ..-+..--+|+ -++.++.
T Consensus 12 ~aL~dtLdEli~~~~Isp~la~k-VL~~FDksi~~aL~~~vksk~sfK-G~L~tYr 65 (108)
T 1nvp_D 12 NSLQESLDELIQSQQITPQLALQ-VLLQFDKAINAALAQRVRNRVNFR-GSLNTYR 65 (108)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHH-HHHHHHHHHHHHHHHTCCCEEEEE-EEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHH-HHHHHHHHHHHHHHHHhccCCeEe-eccCCcc
Confidence 46999999999999999985432 333455555553 22233223466 5666554
No 290
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=22.29 E-value=52 Score=31.40 Aligned_cols=37 Identities=16% Similarity=0.094 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHH
Q 018892 12 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASE 50 (349)
Q Consensus 12 ~~~l~~ai~~~~~~~~~~~~~iaD~Gcs~G~Ns~~~~~~ 50 (349)
++.|..++..+.. -...-+|.|.||++|.-.+.+...
T Consensus 180 ~e~lAa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 180 RETLAAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp CHHHHHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHH
Confidence 3444444443321 123468999999999988776554
No 291
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=22.28 E-value=66 Score=28.42 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHhh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 256 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie~ 256 (349)
+|+-+-+-++.|+.+|.|+++..+ .-.+..+++|+-+.|++
T Consensus 146 fw~~l~~~l~~~~~~Gfi~~~~~~---~~~~~d~~ee~~~~l~~ 186 (216)
T 1ydh_A 146 YYNNLLALFDTGVEEGFIKPGARN---IVVSAPTAKELMEKMEE 186 (216)
T ss_dssp TTHHHHHHHHHHHHTTSSCHHHHT---TEEEESSHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHCCCCChHHcC---eEEEeCCHHHHHHHHHH
Confidence 577777777999999999999765 46788999999999985
No 292
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=22.25 E-value=31 Score=31.09 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=15.3
Q ss_pred HHHHhhHhhccCceEEEEe
Q 018892 179 FLKCRSEELVAEGRMVLTF 197 (349)
Q Consensus 179 FL~~Ra~EL~~GG~mvl~~ 197 (349)
|++.=.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 5566678899999999864
No 293
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=22.18 E-value=50 Score=28.62 Aligned_cols=40 Identities=8% Similarity=0.092 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHh
Q 018892 213 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVI 255 (349)
Q Consensus 213 ~~~~l~~al~~mv~eG~i~~e~~d~fn~P~y~~s~~E~~~~ie 255 (349)
+|+-+-+-++.|+.+|.|+++..+. -.+..+++|+.+.|+
T Consensus 149 fw~~l~~~l~~~~~~Gfi~~~~~~~---i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 149 HFDGLRAWLSELADTGYVSRTAMER---LIVVDNLDDALQACA 188 (189)
T ss_dssp TTHHHHHHHHHHHHTTSSCHHHHHH---EEEESSHHHHHHHHC
T ss_pred cchHHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHhc
Confidence 5777777788999999999997664 457889999887764
No 294
>1pp9_D Cytochrome C-1, cytochrome C1, heme protein, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: a.3.1.3 f.23.11.1 PDB: 1bgy_D* 1be3_D* 1l0n_D* 1ntk_D* 1ntm_D* 1ntz_D* 1nu1_D* 1l0l_D* 1ppj_D* 1sqb_D* 1sqp_D* 1sqq_D* 1sqv_D* 1sqx_D* 2a06_D* 2fyu_D* 2ybb_D* 1bcc_D* 2bcc_D* 3bcc_D* ...
Probab=22.06 E-value=62 Score=29.31 Aligned_cols=51 Identities=16% Similarity=0.353 Sum_probs=32.7
Q ss_pred cCCcccccccCCCceeEEEecccccccccCCCCcCCCCceeEEcCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 018892 114 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 184 (349)
Q Consensus 114 vpgSFy~rlfP~~Svh~~~Ss~alHWLS~~P~~l~~n~~~i~~~~ss~~~v~~ay~~Q~~~D~~~FL~~Ra 184 (349)
.||-+|+.+||.+ |++ +|..+.+ +-|-+...++.+ .+|..+|+.+||.-=+
T Consensus 144 ~~G~~~N~~Fpg~------------~ia-MP~~L~~--~~v~y~dGtp~~-----~~q~a~Dvv~FL~w~a 194 (241)
T 1pp9_D 144 REGLYFNPYFPGQ------------AIG-MAPPIYN--EVLEFDDGTPAT-----MSQVAKDVCTFLRWAA 194 (241)
T ss_dssp CTTCEECTTSTTS------------EES-SCCCCCT--TSSCCTTCCCCC-----HHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCC------------ccc-ccccccc--cceecCCCCccc-----hHHHHHHHHHHHHHhc
Confidence 6788999999874 334 4655543 222222223444 5789999999998633
No 295
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.05 E-value=1.2e+02 Score=20.89 Aligned_cols=41 Identities=17% Similarity=0.249 Sum_probs=29.3
Q ss_pred cccHHHHHHHHHHHHHHHH-hcCCCCCceEEEeCCCCCCchH
Q 018892 42 PNTLLVASELIKVVNKICD-KLGSQLPEFQVFLNDLPGNDFN 82 (349)
Q Consensus 42 ~Ns~~~~~~ii~~i~~~~~-~~~~~~p~~~v~~nDlP~NDFn 82 (349)
+.|-.--..+++.|.+... .+|.++..+.|.+++.|..||.
T Consensus 13 grs~eqK~~l~~~lt~~l~~~lg~p~~~v~V~i~e~~~~~w~ 54 (67)
T 3m21_A 13 GPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYG 54 (67)
T ss_dssp BSCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEECCTTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeE
Confidence 6677666666666666543 3576666799999999987774
No 296
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=21.96 E-value=72 Score=24.50 Aligned_cols=29 Identities=21% Similarity=0.588 Sum_probs=20.2
Q ss_pred eecCCCCcccHHHHHHH-----HHHHHHHHHhcC
Q 018892 35 DLGCSSGPNTLLVASEL-----IKVVNKICDKLG 63 (349)
Q Consensus 35 D~Gcs~G~Ns~~~~~~i-----i~~i~~~~~~~~ 63 (349)
++||..|+|.+-++..+ .++++......|
T Consensus 61 Cf~cg~gGd~i~fv~~~~~~sf~eA~~~La~~~g 94 (103)
T 1d0q_A 61 CFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAG 94 (103)
T ss_dssp ETTTCCEECHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred ECCCCCCCCHHHHHHHHhCCCHHHHHHHHHHHhC
Confidence 89999999999887764 445554433334
No 297
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=21.63 E-value=46 Score=26.58 Aligned_cols=26 Identities=27% Similarity=0.479 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHh
Q 018892 161 PPCVLTAYYEQFQRDFSLFLKCRSEE 186 (349)
Q Consensus 161 ~~~v~~ay~~Q~~~D~~~FL~~Ra~E 186 (349)
|..+.+.|++||++||...|+.|..+
T Consensus 12 ~~k~i~~fS~eF~~~Fl~lLr~~~g~ 37 (111)
T 2v1n_A 12 PQQFMDYFSEEFRNDFLELLRRRFGT 37 (111)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45578999999999999999988654
No 298
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=21.61 E-value=48 Score=26.83 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCch
Q 018892 44 TLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDF 81 (349)
Q Consensus 44 s~~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDF 81 (349)
|-..-..+++.|.+...+.+.++-.+.|+++|+|.++|
T Consensus 78 t~EqK~~la~~IT~av~~~~~~~e~V~Vif~el~~~~y 115 (122)
T 1u9d_A 78 EQQTQDQIAQVITDQIRQLLGADSHLAVVFIPLQRTAY 115 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEECCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCceEEEEEEecCHHHe
Confidence 55555555555555544444444579999999998765
No 299
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=21.51 E-value=47 Score=24.31 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEeCCCCCCchHH
Q 018892 46 LVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNT 83 (349)
Q Consensus 46 ~~~~~ii~~i~~~~~~~~~~~p~~~v~~nDlP~NDFn~ 83 (349)
.++..+.+++.+. +|.++-.+.|+.+|+|..+|..
T Consensus 18 ~lI~~VT~a~~es---lgap~esVrVlItE~p~en~gi 52 (70)
T 3ej9_B 18 QLIRDVIDVTNKS---IGSDPKIINVLLVEHAEANMSI 52 (70)
T ss_dssp HHHHHHHHHHHHH---HCCCGGGCEEEEEEECGGGEES
T ss_pred HHHHHHHHHHHHH---cCCChHHEEEEeeeCChhhcee
Confidence 3566666666654 6777667999999999988853
No 300
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=20.86 E-value=52 Score=24.57 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=24.5
Q ss_pred hccCCcCcccCCHHHHHHHHh----hCCceEEEEEE
Q 018892 235 VNCFNIPQYTPSPAEIKSEVI----KEGSFTIDHLE 266 (349)
Q Consensus 235 ~d~fn~P~y~~s~~E~~~~ie----~~GsF~i~~~e 266 (349)
..+|-+|+|..|.||-..+-| +.| |.|.++.
T Consensus 44 ~~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVR 78 (84)
T 2lmc_A 44 EHSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVR 78 (84)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEE
T ss_pred cceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEec
Confidence 346779999999999888776 335 9998874
Done!