Query 018894
Match_columns 349
No_of_seqs 142 out of 1470
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:56:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018894.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018894hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 4.6E-37 1E-41 279.4 24.1 288 10-299 2-297 (302)
2 PTZ00343 triose or hexose phos 100.0 1.3E-35 2.9E-40 273.7 30.3 287 8-296 47-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 5.4E-35 1.2E-39 259.6 15.8 296 4-302 11-314 (316)
4 PLN00411 nodulin MtN21 family 100.0 4.8E-30 1E-34 235.9 28.8 290 5-300 8-333 (358)
5 KOG1444 Nucleotide-sugar trans 100.0 6.3E-29 1.4E-33 215.9 24.5 297 5-301 7-306 (314)
6 PF06027 DUF914: Eukaryotic pr 100.0 7.1E-28 1.5E-32 217.0 27.5 274 20-300 23-310 (334)
7 PF08449 UAA: UAA transporter 100.0 3.6E-27 7.7E-32 214.2 27.6 275 25-300 15-302 (303)
8 PRK11689 aromatic amino acid e 100.0 1.3E-26 2.7E-31 209.9 28.5 271 5-296 3-288 (295)
9 PRK11453 O-acetylserine/cystei 100.0 1.7E-25 3.7E-30 203.0 28.8 277 8-297 6-289 (299)
10 PRK11272 putative DMT superfam 100.0 1.1E-25 2.5E-30 203.5 27.0 267 19-298 17-288 (292)
11 KOG1443 Predicted integral mem 99.9 6.5E-26 1.4E-30 194.2 23.2 284 8-293 14-313 (349)
12 PRK10532 threonine and homoser 99.9 2.1E-25 4.6E-30 201.7 27.2 256 23-298 25-284 (293)
13 TIGR00950 2A78 Carboxylate/Ami 99.9 1.4E-25 3E-30 199.8 25.0 252 26-290 5-259 (260)
14 PRK15430 putative chlorampheni 99.9 2.5E-25 5.4E-30 201.6 25.7 258 26-298 24-288 (296)
15 COG5070 VRG4 Nucleotide-sugar 99.9 2.8E-25 6E-30 181.9 17.0 287 12-301 8-302 (309)
16 KOG1442 GDP-fucose transporter 99.9 7.1E-27 1.5E-31 196.9 5.5 302 7-309 25-341 (347)
17 TIGR03340 phn_DUF6 phosphonate 99.9 1.1E-21 2.4E-26 176.5 22.0 260 21-292 12-280 (281)
18 COG0697 RhaT Permeases of the 99.9 1.3E-18 2.8E-23 157.1 31.0 263 20-296 17-288 (292)
19 COG5006 rhtA Threonine/homoser 99.9 1.2E-19 2.6E-24 152.0 21.9 252 28-298 30-285 (292)
20 KOG1581 UDP-galactose transpor 99.9 3E-19 6.6E-24 153.6 23.5 261 37-299 47-317 (327)
21 TIGR00688 rarD rarD protein. T 99.9 2.7E-19 5.8E-24 158.9 23.6 243 7-270 3-255 (256)
22 KOG3912 Predicted integral mem 99.8 2.1E-19 4.6E-24 152.4 19.1 282 16-297 9-336 (372)
23 KOG2234 Predicted UDP-galactos 99.8 5.4E-18 1.2E-22 150.0 26.4 285 10-298 15-325 (345)
24 KOG2766 Predicted membrane pro 99.8 2E-20 4.4E-25 156.6 6.8 267 17-295 25-299 (336)
25 KOG1580 UDP-galactose transpor 99.8 9E-19 2E-23 145.0 16.5 255 38-294 50-312 (337)
26 COG2962 RarD Predicted permeas 99.8 3.2E-17 7E-22 141.2 26.2 273 13-302 11-290 (293)
27 KOG2765 Predicted membrane pro 99.8 5.9E-18 1.3E-22 149.5 18.2 214 82-297 169-392 (416)
28 PF04142 Nuc_sug_transp: Nucle 99.8 3.8E-18 8.3E-23 148.9 16.7 210 72-285 17-243 (244)
29 KOG1582 UDP-galactose transpor 99.8 9.9E-18 2.1E-22 141.7 17.1 287 10-297 43-334 (367)
30 KOG4510 Permease of the drug/m 99.8 6.7E-20 1.4E-24 154.5 4.1 265 19-297 47-327 (346)
31 KOG1583 UDP-N-acetylglucosamin 99.8 6.9E-18 1.5E-22 143.1 15.8 271 28-299 21-318 (330)
32 TIGR00776 RhaT RhaT L-rhamnose 99.8 1.9E-16 4E-21 142.8 24.3 260 9-295 4-288 (290)
33 PF03151 TPT: Triose-phosphate 99.7 2.1E-16 4.6E-21 129.1 13.8 143 153-295 1-153 (153)
34 TIGR00803 nst UDP-galactose tr 99.4 3.9E-12 8.6E-17 110.4 10.2 194 96-293 2-222 (222)
35 COG2510 Predicted membrane pro 99.3 3.6E-11 7.9E-16 90.8 11.2 135 153-294 4-138 (140)
36 PF00892 EamA: EamA-like trans 99.2 2.8E-10 6.1E-15 89.2 10.1 124 162-294 1-125 (126)
37 COG2510 Predicted membrane pro 99.1 6.6E-10 1.4E-14 84.0 10.0 128 14-144 7-139 (140)
38 KOG4314 Predicted carbohydrate 99.1 1.9E-10 4.1E-15 93.5 7.3 215 74-295 55-276 (290)
39 PF00892 EamA: EamA-like trans 99.1 3.2E-10 7E-15 88.8 7.1 115 25-143 6-125 (126)
40 PF13536 EmrE: Multidrug resis 99.1 6.2E-10 1.4E-14 85.8 7.6 102 46-148 2-110 (113)
41 TIGR00688 rarD rarD protein. T 99.0 1.8E-08 3.8E-13 89.5 14.0 140 152-294 2-141 (256)
42 PF06800 Sugar_transport: Suga 98.9 1.1E-07 2.5E-12 83.1 18.3 202 77-292 50-268 (269)
43 PRK15430 putative chlorampheni 98.9 4.7E-08 1E-12 88.7 14.9 141 148-294 4-144 (296)
44 TIGR03340 phn_DUF6 phosphonate 98.8 3.1E-07 6.7E-12 82.7 15.2 133 154-295 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.7 4.9E-07 1.1E-11 80.3 14.4 130 9-140 127-260 (260)
46 PLN00411 nodulin MtN21 family 98.7 6E-07 1.3E-11 83.2 15.2 138 152-295 13-156 (358)
47 PF05653 Mg_trans_NIPA: Magnes 98.6 1.3E-06 2.8E-11 78.9 14.3 210 80-296 58-293 (300)
48 PRK11689 aromatic amino acid e 98.4 1.2E-05 2.5E-10 73.0 14.3 130 152-295 4-137 (295)
49 PRK11272 putative DMT superfam 98.3 2E-05 4.3E-10 71.4 15.1 130 154-295 10-141 (292)
50 PRK02971 4-amino-4-deoxy-L-ara 98.3 2E-05 4.3E-10 61.8 13.0 120 152-296 2-123 (129)
51 PRK15051 4-amino-4-deoxy-L-ara 98.3 4.9E-06 1.1E-10 63.6 9.4 64 80-143 45-108 (111)
52 PRK13499 rhamnose-proton sympo 98.3 0.00047 1E-08 63.0 22.8 220 75-296 76-342 (345)
53 PRK11453 O-acetylserine/cystei 98.2 3.7E-05 7.9E-10 69.9 14.9 125 154-295 6-132 (299)
54 PRK10532 threonine and homoser 98.2 2.1E-05 4.6E-10 71.2 12.3 127 13-144 151-281 (293)
55 PTZ00343 triose or hexose phos 98.2 7E-05 1.5E-09 69.5 15.6 135 154-295 51-186 (350)
56 TIGR00817 tpt Tpt phosphate/ph 98.1 9.2E-05 2E-09 67.4 15.2 124 163-294 13-136 (302)
57 COG2962 RarD Predicted permeas 98.1 6.3E-05 1.4E-09 65.8 13.2 141 150-296 5-145 (293)
58 PF03151 TPT: Triose-phosphate 98.1 4.8E-05 1E-09 61.7 12.0 126 18-143 8-152 (153)
59 PF13536 EmrE: Multidrug resis 98.0 5.7E-05 1.2E-09 58.0 10.1 71 226-297 37-108 (113)
60 PRK15051 4-amino-4-deoxy-L-ara 97.9 0.00028 6.1E-09 53.9 12.1 58 237-294 51-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00012 2.7E-09 66.1 12.0 131 153-296 2-137 (290)
62 PF04657 DUF606: Protein of un 97.9 0.00053 1.1E-08 54.5 13.2 132 153-292 2-138 (138)
63 PF08449 UAA: UAA transporter 97.9 0.00035 7.5E-09 63.6 13.9 128 164-300 12-141 (303)
64 PRK02971 4-amino-4-deoxy-L-ara 97.9 0.00036 7.8E-09 54.7 11.5 70 76-145 52-123 (129)
65 COG0697 RhaT Permeases of the 97.7 0.0018 3.9E-08 58.0 15.4 141 151-299 6-147 (292)
66 PF07857 DUF1632: CEO family ( 97.7 0.00011 2.5E-09 64.1 6.7 133 153-301 1-140 (254)
67 PRK10452 multidrug efflux syst 97.7 0.00033 7.2E-09 53.9 8.5 71 74-144 32-103 (120)
68 KOG2922 Uncharacterized conser 97.6 0.00037 8.1E-09 61.8 9.2 207 74-294 65-305 (335)
69 PRK10650 multidrug efflux syst 97.5 0.00077 1.7E-08 51.0 8.8 67 76-142 39-106 (109)
70 PF06027 DUF914: Eukaryotic pr 97.5 0.0023 5E-08 58.5 13.6 75 224-298 80-154 (334)
71 PRK09541 emrE multidrug efflux 97.5 0.00077 1.7E-08 51.2 8.2 68 77-144 35-103 (110)
72 COG4975 GlcU Putative glucose 97.5 2.8E-05 6.2E-10 66.0 0.2 203 79-295 66-285 (288)
73 PRK11431 multidrug efflux syst 97.4 0.00089 1.9E-08 50.3 7.9 69 75-143 32-101 (105)
74 COG2076 EmrE Membrane transpor 97.4 0.0011 2.3E-08 49.4 7.7 70 74-143 32-102 (106)
75 PRK10452 multidrug efflux syst 97.4 0.0049 1.1E-07 47.5 11.2 59 238-296 45-104 (120)
76 COG3238 Uncharacterized protei 97.3 0.0088 1.9E-07 47.7 12.9 138 151-295 4-146 (150)
77 PF06800 Sugar_transport: Suga 97.3 0.0036 7.7E-08 55.1 11.4 127 9-140 137-267 (269)
78 PRK10650 multidrug efflux syst 97.2 0.01 2.2E-07 44.9 11.7 56 239-294 51-107 (109)
79 PF04142 Nuc_sug_transp: Nucle 97.2 0.0013 2.8E-08 57.8 7.8 77 223-299 17-93 (244)
80 PF00893 Multi_Drug_Res: Small 97.2 0.002 4.4E-08 47.5 7.6 58 78-135 35-93 (93)
81 PF05653 Mg_trans_NIPA: Magnes 97.1 0.0022 4.8E-08 58.0 7.7 119 150-296 5-123 (300)
82 PRK13499 rhamnose-proton sympo 97.0 0.0054 1.2E-07 56.2 9.7 141 151-298 6-156 (345)
83 PRK09541 emrE multidrug efflux 96.9 0.009 2E-07 45.4 9.0 57 240-296 47-104 (110)
84 PRK11431 multidrug efflux syst 96.9 0.0086 1.9E-07 45.0 8.8 56 240-295 46-102 (105)
85 KOG4510 Permease of the drug/m 96.8 0.00027 5.8E-09 60.9 -0.0 136 152-299 38-173 (346)
86 COG5006 rhtA Threonine/homoser 96.7 0.019 4.2E-07 49.4 10.2 125 11-140 149-278 (292)
87 COG2076 EmrE Membrane transpor 96.7 0.016 3.5E-07 43.2 8.2 56 241-296 48-104 (106)
88 TIGR00803 nst UDP-galactose tr 96.6 0.065 1.4E-06 46.3 13.1 67 75-141 155-221 (222)
89 KOG2234 Predicted UDP-galactos 96.3 0.17 3.6E-06 46.0 14.1 141 154-294 17-163 (345)
90 PF10639 UPF0546: Uncharacteri 96.2 0.0091 2E-07 45.3 4.8 65 78-142 47-112 (113)
91 PF04657 DUF606: Protein of un 95.9 0.32 7E-06 38.6 12.5 116 24-141 15-138 (138)
92 PF00893 Multi_Drug_Res: Small 95.9 0.083 1.8E-06 38.8 8.4 49 238-286 44-93 (93)
93 KOG1581 UDP-galactose transpor 95.0 0.22 4.7E-06 44.3 9.3 134 7-141 169-310 (327)
94 KOG1441 Glucose-6-phosphate/ph 94.8 0.042 9.1E-07 49.8 4.8 138 6-144 159-307 (316)
95 KOG1580 UDP-galactose transpor 94.6 0.11 2.5E-06 44.2 6.4 64 236-299 98-161 (337)
96 KOG2765 Predicted membrane pro 94.5 0.056 1.2E-06 49.3 4.7 75 226-300 162-236 (416)
97 COG4975 GlcU Putative glucose 94.4 0.026 5.6E-07 48.5 2.2 131 153-297 3-138 (288)
98 PF10639 UPF0546: Uncharacteri 93.8 0.45 9.8E-06 36.1 7.6 53 240-292 58-111 (113)
99 KOG2922 Uncharacterized conser 93.7 0.0067 1.5E-07 54.0 -2.7 125 148-300 17-141 (335)
100 COG3238 Uncharacterized protei 92.2 4.3 9.3E-05 32.5 11.4 123 19-143 14-145 (150)
101 PF05297 Herpes_LMP1: Herpesvi 90.8 0.072 1.6E-06 46.5 0.0 102 90-192 41-146 (381)
102 PF06379 RhaT: L-rhamnose-prot 90.0 4 8.7E-05 37.3 10.4 144 151-300 6-158 (344)
103 KOG4314 Predicted carbohydrate 89.7 0.19 4E-06 41.8 1.6 61 237-297 67-127 (290)
104 PF07168 Ureide_permease: Urei 88.6 0.55 1.2E-05 41.8 3.8 134 158-295 2-146 (336)
105 COG5070 VRG4 Nucleotide-sugar 84.9 8.3 0.00018 33.0 8.6 126 15-141 160-293 (309)
106 KOG1444 Nucleotide-sugar trans 77.6 55 0.0012 29.7 13.9 136 153-295 13-149 (314)
107 KOG3912 Predicted integral mem 77.2 14 0.0003 32.9 7.6 58 238-295 101-158 (372)
108 PF06379 RhaT: L-rhamnose-prot 75.3 68 0.0015 29.5 23.1 221 74-295 75-340 (344)
109 PF05961 Chordopox_A13L: Chord 72.0 5.5 0.00012 26.8 3.0 23 278-300 5-27 (68)
110 PF04342 DUF486: Protein of un 71.0 18 0.00039 26.9 5.8 31 262-292 75-105 (108)
111 KOG4831 Unnamed protein [Funct 70.1 4 8.6E-05 30.3 2.3 70 73-143 54-124 (125)
112 KOG1442 GDP-fucose transporter 66.4 6.2 0.00014 34.9 3.1 55 239-293 118-172 (347)
113 PRK02237 hypothetical protein; 65.7 52 0.0011 24.7 7.3 45 252-296 62-106 (109)
114 KOG2766 Predicted membrane pro 62.8 1.3 2.8E-05 38.5 -1.6 59 237-295 92-150 (336)
115 PRK02237 hypothetical protein; 59.4 74 0.0016 23.9 8.9 37 108-144 69-105 (109)
116 PF02694 UPF0060: Uncharacteri 59.2 42 0.00091 25.1 5.9 45 252-296 60-104 (107)
117 TIGR00939 2a57 Equilibrative N 58.6 1.3E+02 0.0029 28.8 11.0 15 280-294 179-193 (437)
118 PF10225 DUF2215: Uncharacteri 58.3 57 0.0012 28.7 7.7 42 243-284 115-156 (249)
119 KOG3762 Predicted transporter 57.3 41 0.00089 33.2 7.1 20 282-301 535-554 (618)
120 PRK02463 OxaA-like protein pre 57.3 80 0.0017 28.8 8.7 39 255-294 210-248 (307)
121 PHA03049 IMV membrane protein; 54.2 16 0.00035 24.5 2.7 23 278-300 5-27 (68)
122 PF02694 UPF0060: Uncharacteri 53.5 94 0.002 23.3 8.7 39 107-145 66-104 (107)
123 PF08507 COPI_assoc: COPI asso 53.4 1.1E+02 0.0023 24.0 11.0 35 259-294 70-104 (136)
124 COG3169 Uncharacterized protei 49.7 1E+02 0.0022 22.7 6.9 49 245-293 59-113 (116)
125 PF07857 DUF1632: CEO family ( 49.1 1.9E+02 0.0041 25.6 10.8 101 41-144 27-134 (254)
126 PRK13108 prolipoprotein diacyl 48.7 2.4E+02 0.0053 27.3 10.8 23 275-297 254-276 (460)
127 PRK15432 autoinducer 2 ABC tra 48.6 65 0.0014 29.9 6.9 24 276-299 287-310 (344)
128 PF04342 DUF486: Protein of un 46.8 1.2E+02 0.0026 22.7 7.4 53 90-142 53-106 (108)
129 PF03348 Serinc: Serine incorp 44.5 3E+02 0.0064 26.5 19.0 25 273-297 281-305 (429)
130 PF04277 OAD_gamma: Oxaloaceta 44.1 30 0.00064 24.2 3.1 11 280-290 9-19 (79)
131 PF12794 MscS_TM: Mechanosensi 43.6 1.4E+02 0.0031 27.5 8.3 12 109-120 61-72 (340)
132 PF06679 DUF1180: Protein of u 43.5 37 0.0008 27.7 3.9 8 317-324 137-144 (163)
133 KOG0252 Inorganic phosphate tr 41.2 23 0.0005 34.2 2.7 30 276-305 223-252 (538)
134 PF08627 CRT-like: CRT-like; 40.8 75 0.0016 24.6 4.9 41 6-47 53-93 (130)
135 KOG1443 Predicted integral mem 40.6 1.2E+02 0.0027 27.5 6.9 71 228-298 89-159 (349)
136 COG1742 Uncharacterized conser 40.6 1.5E+02 0.0033 22.1 10.0 37 109-145 69-105 (109)
137 TIGR00806 rfc RFC reduced fola 37.3 4.2E+02 0.009 26.1 12.4 32 238-269 373-404 (511)
138 KOG1582 UDP-galactose transpor 37.3 2E+02 0.0043 25.8 7.5 60 241-300 124-183 (367)
139 PF15048 OSTbeta: Organic solu 37.2 34 0.00074 26.3 2.6 24 272-295 29-56 (125)
140 PF01102 Glycophorin_A: Glycop 36.1 28 0.00062 26.8 2.1 7 291-297 84-90 (122)
141 TIGR00892 2A0113 monocarboxyla 36.1 2.9E+02 0.0062 26.4 9.6 12 280-291 404-415 (455)
142 PRK06638 NADH:ubiquinone oxido 35.4 2.7E+02 0.0059 23.4 12.2 31 264-294 133-165 (198)
143 TIGR02865 spore_II_E stage II 34.6 5.6E+02 0.012 26.8 15.0 43 100-142 12-54 (764)
144 KOG1583 UDP-N-acetylglucosamin 34.1 1.3E+02 0.0027 27.0 5.9 43 101-143 271-313 (330)
145 COG3169 Uncharacterized protei 33.9 1.9E+02 0.0042 21.3 8.8 31 112-142 83-113 (116)
146 PF15102 TMEM154: TMEM154 prot 33.5 53 0.0012 26.1 3.2 21 281-301 67-87 (146)
147 PF09656 PGPGW: Putative trans 33.4 1.2E+02 0.0026 19.6 4.3 44 128-176 5-48 (53)
148 PF05977 MFS_3: Transmembrane 32.7 5E+02 0.011 25.7 22.0 21 249-269 346-366 (524)
149 TIGR00905 2A0302 transporter, 32.0 4.7E+02 0.01 25.2 11.8 22 278-299 417-438 (473)
150 PRK04570 cell division protein 31.0 1.1E+02 0.0025 26.4 5.0 16 284-299 16-31 (243)
151 TIGR03644 marine_trans_1 proba 30.4 4.9E+02 0.011 24.8 11.1 204 111-335 175-403 (404)
152 PF03631 Virul_fac_BrkB: Virul 30.0 3.7E+02 0.0081 23.4 10.6 43 43-85 160-204 (260)
153 PF07444 Ycf66_N: Ycf66 protei 29.7 57 0.0012 23.3 2.6 25 274-298 4-28 (84)
154 COG1742 Uncharacterized conser 28.7 2E+02 0.0044 21.5 5.3 45 252-296 61-105 (109)
155 PRK14778 lipoprotein signal pe 28.1 82 0.0018 26.3 3.7 10 335-344 172-181 (186)
156 PF10754 DUF2569: Protein of u 27.5 3.1E+02 0.0067 21.8 6.9 26 151-176 120-145 (149)
157 COG3086 RseC Positive regulato 27.1 92 0.002 24.8 3.5 28 244-271 69-96 (150)
158 KOG4812 Golgi-associated prote 26.9 1E+02 0.0022 26.8 4.0 21 274-294 218-238 (262)
159 TIGR01943 rnfA electron transp 24.6 4.2E+02 0.0092 22.2 8.8 32 3-34 32-64 (190)
160 KOG2096 WD40 repeat protein [G 24.3 1.1E+02 0.0023 28.0 3.8 25 317-342 43-67 (420)
161 COG5336 Uncharacterized protei 23.8 1.9E+02 0.0042 21.7 4.5 9 261-269 57-65 (116)
162 PF14283 DUF4366: Domain of un 23.8 71 0.0015 27.5 2.6 12 288-299 172-183 (218)
163 PF06210 DUF1003: Protein of u 23.6 1.6E+02 0.0035 22.2 4.2 15 10-24 5-19 (108)
164 PF02673 BacA: Bacitracin resi 23.4 5.2E+02 0.011 22.9 9.7 45 40-85 110-157 (259)
165 PF03729 DUF308: Short repeat 22.4 2.4E+02 0.0052 18.5 5.4 31 130-160 2-32 (72)
166 PLN00028 nitrate transmembrane 22.3 7E+02 0.015 23.9 12.3 19 279-297 415-433 (476)
167 PF11446 DUF2897: Protein of u 21.7 91 0.002 20.3 2.2 18 281-298 6-23 (55)
168 PF10192 GpcrRhopsn4: Rhodopsi 21.0 5.1E+02 0.011 22.7 7.6 55 7-61 134-195 (257)
169 PRK10655 potE putrescine trans 20.9 3.4E+02 0.0073 25.8 7.0 24 278-301 409-432 (438)
170 PF07214 DUF1418: Protein of u 20.7 1.4E+02 0.003 21.9 3.2 6 282-287 52-57 (96)
171 PF04246 RseC_MucC: Positive r 20.5 85 0.0018 24.5 2.3 24 248-271 66-89 (135)
172 KOG4831 Unnamed protein [Funct 20.4 3.4E+02 0.0074 20.4 5.1 41 253-293 83-123 (125)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=4.6e-37 Score=279.43 Aligned_cols=288 Identities=19% Similarity=0.188 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc---ccccCCCCchhHHHHHHHHHHHH
Q 018894 10 GTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK---LFEHKPFDPRAVMGFGVLNGISI 86 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 86 (349)
..+..+++|+.+|++.+++||++++ ++++|+.++++|+.++.+++...+..+ +.+.++++++.+++.|++.+.+.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 79 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGH 79 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999998 589999999999999987766653222 22224456778888999988899
Q ss_pred hhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHHH
Q 018894 87 GLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCV 166 (349)
Q Consensus 87 ~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~ 166 (349)
.+.+.++++++++.++++++++|+++++++++++|||++++++.+++++++|+.+...++.+.+..|+++++++++++++
T Consensus 80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~ 159 (302)
T TIGR00817 80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVS 159 (302)
T ss_pred HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987766667777899999999999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccccccccc-cc--ccCc-hhHHHHHHHHH-HHHHHHHHHH
Q 018894 167 AQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVF-AF--KYTP-YVLFFIVLSCL-ISVSVNFSTF 241 (349)
Q Consensus 167 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~~~~~-~~~~~~~~~~ 241 (349)
|.++.||..++.+.|+.+...|++..+++.++|.....|++....... .. .... ..+...+..+. ....++...+
T Consensus 160 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T TIGR00817 160 RNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF 239 (302)
T ss_pred HHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988755679999999999999988888876555422111000 00 0111 12222333333 3334556677
Q ss_pred HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
.++++.+|+++++..+++|++++++|++++||++|+.+++|+++++.|+.+|++.|.+
T Consensus 240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999999999999999999999999976543
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.3e-35 Score=273.74 Aligned_cols=287 Identities=19% Similarity=0.214 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccC-----CCCchhHHHHHHHH
Q 018894 8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHK-----PFDPRAVMGFGVLN 82 (349)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 82 (349)
.++.+..++.|+.+|+..++.||++++ .+++|++++++|++++.+++..++..+.++.+ +.+++..++.|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999 47889999999999998776555443332222 22456888999998
Q ss_pred HHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHH
Q 018894 83 GISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVL 162 (349)
Q Consensus 83 ~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~ 162 (349)
...+...+.++++++++.++++++++|+++++++++++|||++++++.+++++++|+.+++.++.+++..|++++++|++
T Consensus 125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~ 204 (350)
T PTZ00343 125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNL 204 (350)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHH
Confidence 87777788999999999999999999999999999999999999999999999999999998888888899999999999
Q ss_pred HHHHHHHHHHHHHhhc-----CCCHHHHHHHhhHHHHHHHHHHHHhhhccccccc------ccccccCchhHHHHHHHHH
Q 018894 163 TTCVAQIMTNTIQKKF-----KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKN------VFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 163 ~~a~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 231 (349)
++|+|+++.|+.++++ +.++.+...+..++++++++|..+..|+...... ..........++.++.+++
T Consensus 205 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 205 GSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence 9999999999998754 3567777777888999999888776654211100 0000011234456677788
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
..++++...+.++++++|.++++.++++|+++++++++++||++|+.+++|+++++.|+++|++.
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 88888888889999999999999999999999999999999999999999999999999999875
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-35 Score=259.58 Aligned_cols=296 Identities=31% Similarity=0.482 Sum_probs=260.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCC----CCchhHHHHH
Q 018894 4 GQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKP----FDPRAVMGFG 79 (349)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~ 79 (349)
+++.......++..|++++++.+++||+++++.++++|++++..+.+.+.+.+......+..+.++ ..++..+++|
T Consensus 11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~ 90 (316)
T KOG1441|consen 11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLG 90 (316)
T ss_pred ccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence 344567777889999999999999999999998999999999999999988888888777655543 6789999999
Q ss_pred HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHH
Q 018894 80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLL 159 (349)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 159 (349)
++++++..+.|.++.+++++.+++++.++|++++++++++.+|+.+...+.+++.+..|+.+++.+|.++|+.|.+.+++
T Consensus 91 ~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~ 170 (316)
T KOG1441|consen 91 LVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMI 170 (316)
T ss_pred HHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--hhcCCCHHHHHHHhhHHHHHHHH-HHHHhhhccccccccccc-ccCchhHHHHHHHHHHHHH
Q 018894 160 AVLTTCVAQIMTNTIQ--KKFKVSSTQLLYQSCPYQALTLF-IIGPFLDGLLTNKNVFAF-KYTPYVLFFIVLSCLISVS 235 (349)
Q Consensus 160 s~~~~a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (349)
+.+..+.++++.|+++ |+++.|+++++.|+.+++.+.++ |.....|+... . .... .+....+.+ ++..++++.
T Consensus 171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~sv~~f~ 247 (316)
T KOG1441|consen 171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVTFLIL-LLNSVLAFL 247 (316)
T ss_pred HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchhhHHH-HHHHHHHHH
Confidence 9999999999999999 46789999999999999999998 66555554332 1 1111 233333334 444499999
Q ss_pred HHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccccc
Q 018894 236 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQ 302 (349)
Q Consensus 236 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~ 302 (349)
+|...+.++.+++|++.++.+.++.++.++.++++|++++|+.+..|+++.+.|+.+|++.|.++++
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999988776543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.98 E-value=4.8e-30 Score=235.88 Aligned_cols=290 Identities=13% Similarity=0.197 Sum_probs=219.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccc--cccCCCCchh---HHHHH
Q 018894 5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKL--FEHKPFDPRA---VMGFG 79 (349)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~---~~~~~ 79 (349)
++|......++++.-.+..++..+.|..++. +.+ |..+.++|+.++.+++.++.+.++ ++.++.++++ +...+
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g 85 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLG 85 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 5567777888999999999999999999974 544 777889999999988877654332 2223334444 44445
Q ss_pred HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHH------hccccchhhhHHHHHhhhhheeeeec-cc-----
Q 018894 80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLF------FRKKFSRNIQLSLVILLVGVGIATVT-DL----- 147 (349)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~------~~e~~s~~~~~~i~l~~~Gv~l~~~~-~~----- 147 (349)
++..++..+.+.+++|++++.+.++.++.|++++++++++ +|||++++++.|++++++|+.++... +.
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 5554455688999999999999999999999999999999 69999999999999999999976531 11
Q ss_pred ------------------ccc-hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccc
Q 018894 148 ------------------QLN-VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLL 208 (349)
Q Consensus 148 ------------------~~~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~ 208 (349)
..+ ..|+++.++++++||+|+++.|+..++++ ++....++...++.+...+.....+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~ 244 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNN 244 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 012 35999999999999999999999988653 3345566666666666555544444221
Q ss_pred ccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHH
Q 018894 209 TNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVI 288 (349)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~ 288 (349)
.. .+...++...+ .++..++.+.+.+..+++++++.+|.+++++.+++|+++++++++++||++++.+++|+++++.
T Consensus 245 ~~--~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~ 321 (358)
T PLN00411 245 PS--VWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL 321 (358)
T ss_pred cc--cceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 11 11111222222 2333444455566788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccc
Q 018894 289 GMVLYSYCCSLE 300 (349)
Q Consensus 289 g~~l~~~~~~~~ 300 (349)
|+++.++.++++
T Consensus 322 Gv~l~~~~~~~~ 333 (358)
T PLN00411 322 GFYAVMWGKANE 333 (358)
T ss_pred HHHHHHhhhhhh
Confidence 999988755544
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.3e-29 Score=215.86 Aligned_cols=297 Identities=23% Similarity=0.302 Sum_probs=261.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCC---chhHHHHHHH
Q 018894 5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFD---PRAVMGFGVL 81 (349)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~~~~~ 81 (349)
.+.+.......+.|+.+|+.+.+.||+++++++||...++...|.+.+.+.+....+.|..+.++.+ .|+++|.+++
T Consensus 7 ~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 7 SKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLL 86 (314)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHH
Confidence 3445666789999999999999999999998888877777779999999999999888877666555 4799999999
Q ss_pred HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHH
Q 018894 82 NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAV 161 (349)
Q Consensus 82 ~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 161 (349)
+.++.+....+++|++++++++++..+|+++++...+++|.|++...|.++....+|.......|..++..|+.+++.++
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~ 166 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANC 166 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 018894 162 LTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTF 241 (349)
Q Consensus 162 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (349)
++.+.+.+..|+..+..+.+.+.+++|.++...+.+.....+++++..-....+.......+..+.++|++++..++..+
T Consensus 167 ~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~ 246 (314)
T KOG1444|consen 167 LTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF 246 (314)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988889999999999999888887776665433111111123345677889999999999999999
Q ss_pred HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccc
Q 018894 242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~ 301 (349)
++.+..++++.++++......+.+...++++++.++..++|..+-+.|.++|++.+.+++
T Consensus 247 ~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k 306 (314)
T KOG1444|consen 247 LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK 306 (314)
T ss_pred HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence 999999999999999777778888888888899999999999999999999998776543
No 6
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.97 E-value=7.1e-28 Score=216.97 Aligned_cols=274 Identities=18% Similarity=0.206 Sum_probs=225.2
Q ss_pred HHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc-----cCCCCchhHHHHHHHHHHHHhhcceecc
Q 018894 20 ISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE-----HKPFDPRAVMGFGVLNGISIGLLNLSLG 94 (349)
Q Consensus 20 ~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~al~ 94 (349)
.+..+.+..+..+.++ +.+.|.+.+++-++.-.++.......|+.+ ..+.+|.+++.++++...++++.+.|++
T Consensus 23 l~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~ 101 (334)
T PF06027_consen 23 LCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQ 101 (334)
T ss_pred HHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334556677777776 888899999888877666655544333222 1345667788889999999999999999
Q ss_pred ccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc---------ccchhHHHHHHHHHHHHH
Q 018894 95 FNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL---------QLNVLGSVLSLLAVLTTC 165 (349)
Q Consensus 95 ~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a 165 (349)
|++.+.++++.+++.+++++++++++|+|+++.+++|++++++|+.++...|. +....|++++++++++||
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya 181 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA 181 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998876441 234689999999999999
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 018894 166 VAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIG 245 (349)
Q Consensus 166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
+++|+.|+..| +.++.+...+..+++.++..+...+.|.... ...+++.....+.+..++..+..+......++
T Consensus 182 ~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i----~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~ 255 (334)
T PF06027_consen 182 VSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILERSGI----ESIHWTSQVIGLLVGYALCLFLFYSLVPIVLR 255 (334)
T ss_pred HHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHheehhhh----hccCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 4578999999999999998888777664321 12345555666666677766666667777899
Q ss_pred ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 246 KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 246 ~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
..+|+...+-..+..+++++++++++|+++++..++|.+++++|.++|+..+.++
T Consensus 256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 9999999998889999999999999999999999999999999999998765543
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=3.6e-27 Score=214.22 Aligned_cols=275 Identities=22% Similarity=0.280 Sum_probs=231.2
Q ss_pred HHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHccc-cccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHH
Q 018894 25 IVICNKALISSLGFT-FATTLTSWHLLVTFCSLHVALWMKL-FEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQ 102 (349)
Q Consensus 25 ~~~~~K~v~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~ 102 (349)
..++++.+.++.... +|+++++.|+....+.........+ .+.++.+++++.+.++++.++..+.+.+++|+|.++.+
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~ 94 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI 94 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 445666666654334 7999999999999988877765554 55567788999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccc----c------chhHHHHHHHHHHHHHHHHHHHH
Q 018894 103 MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQ----L------NVLGSVLSLLAVLTTCVAQIMTN 172 (349)
Q Consensus 103 ~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~s~~~~a~~~v~~k 172 (349)
+++++.|+++++++.+++|+|+++++++++++.++|+++....+.. . ...|+++.+++.++.|++.++.|
T Consensus 95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe 174 (303)
T PF08449_consen 95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQE 174 (303)
T ss_pred HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998764421 1 12399999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhh-cccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 018894 173 TIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLD-GLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVT 251 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 251 (349)
|..++++.++.+.++|.+.++.+..++.....+ ++......+. ...+..+..++..++.+.+.+...+..+++.||++
T Consensus 175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~-~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~ 253 (303)
T PF08449_consen 175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFI-SAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALT 253 (303)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 999999999999999999999998887776522 2211111111 23344666777777777777787888899999999
Q ss_pred hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
.+++.++|.++++++++++|++++++.+|+|+++++.|..+|++.|+|+
T Consensus 254 ~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 254 TTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999877654
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=1.3e-26 Score=209.91 Aligned_cols=271 Identities=18% Similarity=0.089 Sum_probs=196.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHH
Q 018894 5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGI 84 (349)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (349)
.+..+...++++.|.... ...|...++ ++ |..+.++|+.++.+++.++.. +.+.++.+++..+..++....
T Consensus 3 ~~~~l~~l~a~~~Wg~~~----~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 3 QKATLIGLIAILLWSTMV----GLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVS 73 (295)
T ss_pred cchhHHHHHHHHHHHHHH----HHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHH
Confidence 344555556666665443 577888873 33 899999999999988876532 122223333444444444556
Q ss_pred HHhhcceecc----ccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc-----------cc
Q 018894 85 SIGLLNLSLG----FNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL-----------QL 149 (349)
Q Consensus 85 ~~~~~~~al~----~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~-----------~~ 149 (349)
+..+.+.+++ +.++..+.++.++.|+++++++++++|||++++++.++++++.|+.++..++. ..
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 153 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIAS 153 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcccc
Confidence 6666666664 45777889999999999999999999999999999999999999998875432 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894 150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS 229 (349)
Q Consensus 150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (349)
+..|++++++++++||.|+++.||..++ .++..... ..+.+.+.+.... ++... ...+...+..++..
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~-~~~~~------~~~~~~~~~~l~~~ 221 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFL-SPQPA------MVFSLPAIIKLLLA 221 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHH-hcCcc------ccCCHHHHHHHHHH
Confidence 3469999999999999999999998763 45655432 2223333322222 22111 11223334344455
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
++.+...+..+++++|+.++.+++.+.+++|+++++++++++||++++.+++|+++++.|+.+....
T Consensus 222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 5556666788899999999999999999999999999999999999999999999999999887653
No 9
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=1.7e-25 Score=202.97 Aligned_cols=277 Identities=14% Similarity=0.169 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHH-HHH
Q 018894 8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNG-ISI 86 (349)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (349)
....+...++|..... ..|...++ .+ |..+.++|+.++.+.+.++..+ ++.+++..+..+++.. ...
T Consensus 6 ~l~~l~~~~~Wg~~~~----~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 6 GVLALLVVVVWGLNFV----VIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPLNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHhhhHH----HHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC-----CCCchHHHHHHHHHHHHHHH
Confidence 3444455555555554 55887763 33 9999999999987665554321 1223444555555433 344
Q ss_pred hhcceeccc-cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHH
Q 018894 87 GLLNLSLGF-NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVL 162 (349)
Q Consensus 87 ~~~~~al~~-~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~ 162 (349)
.+.+.++++ .+++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++ .+.+..|+.+++++++
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal 153 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF 153 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence 456678887 688999999999999999999999999999999999999999999887542 2234579999999999
Q ss_pred HHHHHHHHHHHHHhhcC-CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHH-HHHHH
Q 018894 163 TTCVAQIMTNTIQKKFK-VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVS-VNFST 240 (349)
Q Consensus 163 ~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (349)
+|+.|.++.||..++.+ .+......+....+.+.+.......+++....... ...+...+..++..++++.. .+..+
T Consensus 154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~i~~t~~~~~l~ 232 (299)
T PRK11453 154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL-VTIDMTTILSLMYLAFVATIVGYGIW 232 (299)
T ss_pred HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876432 22334444555444443333333333321110000 11223334444444444433 35567
Q ss_pred HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
++.+++.++.+.+.+.+++|+++.+++++++||++++.+++|+++++.|+.+..+.+
T Consensus 233 ~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 788999999999999999999999999999999999999999999999998876544
No 10
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=1.1e-25 Score=203.47 Aligned_cols=267 Identities=14% Similarity=0.089 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc-cCCCCchhHHHHHHHH-HHHHhhcceec-cc
Q 018894 19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE-HKPFDPRAVMGFGVLN-GISIGLLNLSL-GF 95 (349)
Q Consensus 19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~ 95 (349)
.+.........|...++ .+ |..++++|+.++.++++++...++.+ ++++++++....+.+. ..+..+.+.+. ++
T Consensus 17 ~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (292)
T PRK11272 17 YIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQN 93 (292)
T ss_pred HHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333355677888773 33 89999999999998877765443322 2233445555566554 35566778888 99
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec-ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018894 96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT-DLQLNVLGSVLSLLAVLTTCVAQIMTNTI 174 (349)
Q Consensus 96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~k~~ 174 (349)
++++.+.++.++.|+++++++.+ +|||++++++.|++++++|+.+...+ +.+.+..|++++++++++||.+.+..||.
T Consensus 94 ~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 94 VPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL 172 (292)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999986 69999999999999999999987643 33455679999999999999999999997
Q ss_pred HhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHHHHhhcccCcchhh
Q 018894 175 QKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFSTFLVIGKTSPVTYQ 253 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~s 253 (349)
.+ + ++.....+....+.+.+.+.....+.+.. ...+...+..++..+++ +...+..+++++++.++...+
T Consensus 173 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 173 PL--P-VGMMAGAAEMLAAGVVLLIASLLSGERLT------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred CC--C-cchHHHHHHHHHHHHHHHHHHHHcCCccc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 64 2 33445566666777666655443322111 01122233333333333 333466778899999999999
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 254 VLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 254 ~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
.+.+++|+++.+++++++||++++.+++|+++++.|+.+.++.++
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998876433
No 11
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=6.5e-26 Score=194.23 Aligned_cols=284 Identities=24% Similarity=0.350 Sum_probs=243.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc--c--cCCCCchh----HHHHH
Q 018894 8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF--E--HKPFDPRA----VMGFG 79 (349)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~--~~~~~~~~----~~~~~ 79 (349)
+...++.+++|+++|+++.+++|+.-. .+++|.+++.+++++-.++.....+..+. + +...+|+. ..+.+
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta 91 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA 91 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence 345566778999999999999999987 58889999999998888776665443222 2 23455654 44889
Q ss_pred HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHH
Q 018894 80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLL 159 (349)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 159 (349)
++.++...+.|++++|++.+.+++.++++++|+.+++.++.-||+++.-.+-++++.+|+.+.++.+.+++..|..+..+
T Consensus 92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~ 171 (349)
T KOG1443|consen 92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA 171 (349)
T ss_pred hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccc--cc-ccc--CchhHHHHHHHHH
Q 018894 160 AVLTTCVAQIMTNTIQKKFK---VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNV--FA-FKY--TPYVLFFIVLSCL 231 (349)
Q Consensus 160 s~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~~ 231 (349)
++++.+++..++|.++++.+ -+|....++..+...+.+++....+||+...... +. .+. ....+..+..+|.
T Consensus 172 aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 172 ASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999998654 4788889999988888899998899987543211 11 122 2344556778888
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY 293 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~ 293 (349)
.+++....-+....+++..+.++.+..+.+++.+++.++.+++++..+|.|..++..|+.++
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 88888888899999999999999999999999999999999999999999999999999999
No 12
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=2.1e-25 Score=201.74 Aligned_cols=256 Identities=13% Similarity=0.083 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHH
Q 018894 23 VSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQ 102 (349)
Q Consensus 23 ~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~ 102 (349)
.......|+..+. ++ |..+.++|++++.+++.++...++.+.++++++..+..+++.+..+.+.+.+++++|++.++
T Consensus 25 ~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~ 101 (293)
T PRK10532 25 QSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAV 101 (293)
T ss_pred HhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 3444578999884 33 88899999999998887665433333344556667777887777788889999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018894 103 MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFK 179 (349)
Q Consensus 103 ~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~ 179 (349)
++..+.|+++++++ +||++.. .++.+++.|+.++...+ .+.+..|++++++++++||.|.+..||..++
T Consensus 102 ~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~-- 173 (293)
T PRK10532 102 ALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE-- 173 (293)
T ss_pred HHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 99999999999886 3555544 45667789988765322 2335679999999999999999999999874
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH-HHHHHHHHHhhcccCcchhhhhhhh
Q 018894 180 VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS-VSVNFSTFLVIGKTSPVTYQVLGHL 258 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~s~~~~~ 258 (349)
.++... .+...++++++.+.....+. . ...+...+...+..++++ ...+..+++++++.++.+++++.++
T Consensus 174 ~~~~~~-~~~~~~~~~~l~~~~~~~~~--~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l 244 (293)
T PRK10532 174 HGPATV-AIGSLIAALIFVPIGALQAG--E------ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSM 244 (293)
T ss_pred CCchHH-HHHHHHHHHHHHHHHHHccC--c------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHh
Confidence 355554 44555666666554433221 0 011222222222333333 2335577889999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 259 ~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
+|+++.+++++++||++++.+++|+++++.|++.+.+..+
T Consensus 245 ~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 245 EPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999976543
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=1.4e-25 Score=199.83 Aligned_cols=252 Identities=15% Similarity=0.086 Sum_probs=197.4
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHH-HHHHHHhhcceeccccchhHHHHH
Q 018894 26 VICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGV-LNGISIGLLNLSLGFNSVGFYQMT 104 (349)
Q Consensus 26 ~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~s~~~~l 104 (349)
....|+..++ ...|..+.+.|++.+.+++.+....+ +++.++++....+. ...+++.+.+.|+++++++.+.++
T Consensus 5 ~~~~k~~~~~--~~~~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 5 GVVIGQYLEG--QVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 4567888873 45588999999999988877765544 33445555555554 456788899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHH
Q 018894 105 KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD-LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSST 183 (349)
Q Consensus 105 ~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~ 183 (349)
.++.|+++++++.+++|||++++++.+++++++|+.+...++ .+.+..|+.++++++++|+.+.+..|+..++.+.++.
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~ 159 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL 159 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence 999999999999999999999999999999999999876543 3455689999999999999999999999885544455
Q ss_pred HHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHHHHhhcccCcchhhhhhhhhHHH
Q 018894 184 QLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFSTFLVIGKTSPVTYQVLGHLKTCL 262 (349)
Q Consensus 184 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~ 262 (349)
....+.+..+.+++.+.....+.+.. .+...+..++..+++ ....+..+++++++.++.+.+.+.+++|++
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~ 231 (260)
T TIGR00950 160 QFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLV 231 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 55556677777777666543332111 122233333333333 344567788899999999999999999999
Q ss_pred HHHHHHHhcCCCCchhhhhhHHHHHHHH
Q 018894 263 VLAFGYVLLHDPFSWRNILGILIAVIGM 290 (349)
Q Consensus 263 ~~~~~~~~~~e~~t~~~~~G~~lii~g~ 290 (349)
+.+++++++||+++..+++|+++++.|+
T Consensus 232 ~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 232 ALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999886
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=2.5e-25 Score=201.58 Aligned_cols=258 Identities=11% Similarity=0.086 Sum_probs=182.0
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-cc---CCCCchhH---HHHHHHHHHHHhhcceeccccch
Q 018894 26 VICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EH---KPFDPRAV---MGFGVLNGISIGLLNLSLGFNSV 98 (349)
Q Consensus 26 ~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~---~~~~~~~~---~~~~~~~~~~~~~~~~al~~~~~ 98 (349)
....|.. . +.+ |..+.++|++++.+++.++...++. +. +.++++.+ ...++..+.++.+.+++++++++
T Consensus 24 ~~~~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 99 (296)
T PRK15430 24 PAYFKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHM 99 (296)
T ss_pred HHHHHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 3455765 4 334 8999999999998866655432211 11 11133332 22345566788999999999999
Q ss_pred hHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018894 99 GFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKF 178 (349)
Q Consensus 99 s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~ 178 (349)
+.+.++.++.|+++++++++++|||++++++.++++++.|+.++..++.+. ..++++++++||.|.+..||..++.
T Consensus 100 ~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~ 175 (296)
T PRK15430 100 LEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEA 175 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999876433222 2468889999999999999975422
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhh
Q 018894 179 KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHL 258 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~ 258 (349)
..+......+....+.+...+ ..+.... ... ......+..++..++.+...+..+++++++.+|...+.+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l 248 (296)
T PRK15430 176 QTGMLIETMWLLPVAAIYLFA---IADSSTS---HMG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYI 248 (296)
T ss_pred chhHHHHHHHHHHHHHHHHHH---HccCCcc---ccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 223333334444443332211 1111100 000 111112233444444555667888999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 259 ~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
+|+++.+++++++||++++.+++|++++++|+.+......
T Consensus 249 ~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 249 GPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888887765433
No 15
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.94 E-value=2.8e-25 Score=181.91 Aligned_cols=287 Identities=21% Similarity=0.269 Sum_probs=256.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcce
Q 018894 12 VGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNL 91 (349)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (349)
..+.+.|+.+++.+.+.||++++..+|+..+.+.+.|...+.+-+..+.+.|..+.+..+.|.|++.+++...+.+....
T Consensus 8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SK 87 (309)
T COG5070 8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSK 87 (309)
T ss_pred chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhccc
Confidence 45778899999999999999999999999999999999999998888888887777788889999999999999999999
Q ss_pred eccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccc--------cchhHHHHHHHHHHH
Q 018894 92 SLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQ--------LNVLGSVLSLLAVLT 163 (349)
Q Consensus 92 al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~s~~~ 163 (349)
+++|++++.++++++++.+.++....+++|.|++.....+.++.+..-....++|.+ .| -|++|+..++++
T Consensus 88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls 166 (309)
T COG5070 88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS 166 (309)
T ss_pred ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence 999999999999999999999999999999999999999999999999998887753 23 499999999999
Q ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHh
Q 018894 164 TCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLV 243 (349)
Q Consensus 164 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
.+.+....|+..+-.+......++|.++.+.++++....+.|+|.+.. .........+.....+|++++...+..-|+
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--~annl~~d~l~am~ISgl~svgiSy~saWc 244 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--LANNLSVDSLMAMFISGLCSVGISYCSAWC 244 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--hhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence 999999999988766778889999999999999999988888765531 122233344667888999999999999999
Q ss_pred hcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccc
Q 018894 244 IGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 244 ~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~ 301 (349)
++..++++.++++.+......+.|.++|+|+.+...+..+.+-.++..+|...+.+++
T Consensus 245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998766543
No 16
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=7.1e-27 Score=196.88 Aligned_cols=302 Identities=21% Similarity=0.230 Sum_probs=259.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHHHcc-----ccccCCCC-----chh
Q 018894 7 FQLGTVGALSLSVISSVSIVICNKALISS--LGFTFATTLTSWHLLVTFCSLHVALWMK-----LFEHKPFD-----PRA 74 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~--~~~~~p~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~-----~~~ 74 (349)
+..++--+...|...++++.+.||++++. ...+.|.+++++|.++...++..+.+.. .++.+..+ .+.
T Consensus 25 n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~ 104 (347)
T KOG1442|consen 25 NAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQ 104 (347)
T ss_pred hhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHh
Confidence 45556667788999999999999999986 3456699999999999988877764422 22222222 367
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccch
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNV 151 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~ 151 (349)
..++++.+.++..+.+++++|.+++.+++=++++.+|+++++++++|+|-+..-..+.+++++|..+-+-.| ...++
T Consensus 105 vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~ 184 (347)
T KOG1442|consen 105 VLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSW 184 (347)
T ss_pred hcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccch
Confidence 889999999999999999999999999999999999999999999999999999999999999999988655 45678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.|.++++.++++-|...+++||.....+..-+.+..|++..+.+.++|... ..++.+....+++.+...+|.++..+|+
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~-lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLI-LNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHH-HcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 999999999999999999999988776778899999999999988887765 4555554444555666778889999999
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccccccccccc
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETS 309 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~~~~~~~~ 309 (349)
++|.+++.+.+-+|.++|.++.+..+.+...+.+++...++|..+..-|-|-.++++|...|++.|..++++..++++
T Consensus 264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s 341 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRS 341 (347)
T ss_pred HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999988877665555443
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.89 E-value=1.1e-21 Score=176.54 Aligned_cols=260 Identities=14% Similarity=0.094 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc--cc--ccCCCCch-hHHHHHHHHHHHHhhcceeccc
Q 018894 21 SSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK--LF--EHKPFDPR-AVMGFGVLNGISIGLLNLSLGF 95 (349)
Q Consensus 21 ~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~al~~ 95 (349)
+......+.|...++ ..+ ..+.+.....+++.++...+ .. +..+.++. .....++....+..+.+.++++
T Consensus 12 ~~a~~~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (281)
T TIGR03340 12 MHAGWNLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHH 86 (281)
T ss_pred HHHHHHHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333445567766553 223 23556666665555554332 11 11122222 2333345566788899999999
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc-cccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018894 96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD-LQLNVLGSVLSLLAVLTTCVAQIMTNTI 174 (349)
Q Consensus 96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~ 174 (349)
.+++.+..+.++.|+++++++++++|||++++++.|+.+++.|+.++..++ ...+..|+.++++++++|+.|.+..|+.
T Consensus 87 ~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 87 ADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred CChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999999999999999999999999999999999999876543 2334568889999999999999998887
Q ss_pred HhhcCCCHHHHHHHhhHHHHHHH-HHHHHhh--hcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 018894 175 QKKFKVSSTQLLYQSCPYQALTL-FIIGPFL--DGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVT 251 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~i~l-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 251 (349)
.++. ++..........+.+.. .+..... .++.. . .......+..+...++.+...+..+++++++.++.+
T Consensus 167 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 167 ALGV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS----M-FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred ccch--hcccccHHHHHHHHHHHHHHHHHHHHHHhccc----h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 5422 22211111111122111 1211111 11100 0 011122334455555556566778889999999999
Q ss_pred hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHH
Q 018894 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVL 292 (349)
Q Consensus 252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l 292 (349)
.+.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999865
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=1.3e-18 Score=157.11 Aligned_cols=263 Identities=17% Similarity=0.148 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-cc-CCCCchhHHH-HHHHHHHHHhhcceecccc
Q 018894 20 ISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EH-KPFDPRAVMG-FGVLNGISIGLLNLSLGFN 96 (349)
Q Consensus 20 ~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~al~~~ 96 (349)
..........|....+ ...+....+.|...+.++.......++. +. ...+++.... .++....+..+.+.+++++
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (292)
T COG0697 17 LLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYT 94 (292)
T ss_pred HHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333344455555552 2335566666998888874444433321 11 1222223333 3455667888999999999
Q ss_pred chhHHHHHhhhHHHHHHHHHH-HHhccccchhhhHHHHHhhhhheeeeeccccc---chhHHHHHHHHHHHHHHHHHHHH
Q 018894 97 SVGFYQMTKLAIIPCTILLET-LFFRKKFSRNIQLSLVILLVGVGIATVTDLQL---NVLGSVLSLLAVLTTCVAQIMTN 172 (349)
Q Consensus 97 ~~s~~~~l~~~~pi~~~~l~~-~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~~~a~~~v~~k 172 (349)
+++.++.+.++.|+++.++++ +++|||++++++.++.+++.|+.++..++... +..|+.+++.+++++|.+.+..|
T Consensus 95 ~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~ 174 (292)
T COG0697 95 SASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVK 174 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 77799999999999999999999999866443 35899999999999999999999
Q ss_pred HHHhhcCCCHHHHHH-HhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHH-HHHHHHHHhhcccCcc
Q 018894 173 TIQKKFKVSSTQLLY-QSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISV-SVNFSTFLVIGKTSPV 250 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ 250 (349)
+.. +.++..... +... ...++.......... .......+......++++. ..+...++.+++.++.
T Consensus 175 ~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~ 242 (292)
T COG0697 175 RLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGAS 242 (292)
T ss_pred Hhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 987 234554444 3322 111111111111100 1222333444444454444 4577788899999999
Q ss_pred hhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 251 TYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 251 ~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
..+...+++|+.+.+.++++++|+++..+++|+++++.|+.+.+..
T Consensus 243 ~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999998765
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=1.2e-19 Score=151.97 Aligned_cols=252 Identities=16% Similarity=0.131 Sum_probs=200.0
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhh
Q 018894 28 CNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLA 107 (349)
Q Consensus 28 ~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~ 107 (349)
+.|.++-..+ |...+++|..++.+++..+.+-.+++..+.+|+.....|+..+.++.++|.+++.+|.+++..+..+
T Consensus 30 ~Ak~LFP~vG---~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~ 106 (292)
T COG5006 30 FAKSLFPLVG---AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT 106 (292)
T ss_pred HHHHHccccC---hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence 4466665434 8899999999999999888776666777888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Q 018894 108 IIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQ 184 (349)
Q Consensus 108 ~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~ 184 (349)
.|+.++.++. -+.++.+.+.+.+.|+.+....+ .+.|+.|..+++.++.||+.|.+..||..+ ..+...
T Consensus 107 GPL~vA~~~s------Rr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~ 178 (292)
T COG5006 107 GPLAVALLSS------RRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTA 178 (292)
T ss_pred cHHHHHHHhc------cchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCch
Confidence 9999998754 34456667777788888765432 466889999999999999999999999986 335666
Q ss_pred HHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHH-HHHHHHhhcccCcchhhhhhhhhHHHH
Q 018894 185 LLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSV-NFSTFLVIGKTSPVTYQVLGHLKTCLV 263 (349)
Q Consensus 185 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~s~~~~~~~v~~ 263 (349)
-+..-+..++++.+|+.....++ .-.++..+...+..++++... +..-..++++.++.+.+++..++|.++
T Consensus 179 g~a~gm~vAaviv~Pig~~~ag~--------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~a 250 (292)
T COG5006 179 GVAVGMLVAALIVLPIGAAQAGP--------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALA 250 (292)
T ss_pred HHHHHHHHHHHHHhhhhhhhcch--------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHH
Confidence 66667777877777766533321 113444555555555555443 334556789999999999999999999
Q ss_pred HHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 264 LAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 264 ~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
.+.+++++||.+|+.||+|++.++.+..-.++..+
T Consensus 251 Al~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 251 ALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 99999999999999999999999999887665433
No 20
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3e-19 Score=153.62 Aligned_cols=261 Identities=18% Similarity=0.149 Sum_probs=216.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHcc-ccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHH
Q 018894 37 GFTFATTLTSWHLLVTFCSLHVALWMK-LFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILL 115 (349)
Q Consensus 37 ~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l 115 (349)
.|..|.++.++|-+.+.++-..+...+ .....+.+|.++...++...+...+.+.|++|++-++..+-+++..+-+++.
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm 126 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM 126 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence 467799999999999998876654433 3344567788888899999999999999999999999999999999999999
Q ss_pred HHHHhccccchhhhHHHHHhhhhheeeeecc---------cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHH
Q 018894 116 ETLFFRKKFSRNIQLSLVILLVGVGIATVTD---------LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLL 186 (349)
Q Consensus 116 ~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~ 186 (349)
..++.|+|++.+++++..++.+|+.+....+ ...++.|+.++..+-+..++-+...+++.+++++++++++
T Consensus 127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM 206 (327)
T KOG1581|consen 127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM 206 (327)
T ss_pred HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence 9999999999999999999999999876531 1245789999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHH
Q 018894 187 YQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAF 266 (349)
Q Consensus 187 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~ 266 (349)
++.++++++..............+.. .....+..++-+...+.++.+-+...++.+++.|+.+.+.++.+|.++++.+
T Consensus 207 ~~vNLf~~i~~~~~li~qg~~~~av~--F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~l 284 (327)
T KOG1581|consen 207 FGVNLFSAILNGTYLILQGHLLPAVS--FIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIML 284 (327)
T ss_pred HHHHHHHHHHHHHhhhcCCCCchHHH--HHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHH
Confidence 99999999888766443333222211 1223455556666666666666888888999999999999999999999999
Q ss_pred HHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 267 GYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 267 ~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
+.+.+++++++.||+|..+++.|..+-...+.+
T Consensus 285 S~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 285 SCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999988888887765555444
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.85 E-value=2.7e-19 Score=158.94 Aligned_cols=243 Identities=13% Similarity=0.094 Sum_probs=163.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-cccc-----ccCCCCch----hHH
Q 018894 7 FQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLF-----EHKPFDPR----AVM 76 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~-----~~~~~~~~----~~~ 76 (349)
.......+.++|...+. ..|. .. +.+ |..+.++|++++.+++.++.. .+++ +.++.+++ ...
T Consensus 3 g~~~~i~a~~~wg~~~~----~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYY----YSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHHHH----HHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 34445555555555554 5677 44 233 899999999999887665432 2211 11111122 234
Q ss_pred HHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHH
Q 018894 77 GFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVL 156 (349)
Q Consensus 77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~ 156 (349)
..+++.+.+..+.++++++++++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+.+ .+
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~ 150 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE 150 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence 45666778889999999999999999999999999999999999999999999999999999997754322221 35
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHH
Q 018894 157 SLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSV 236 (349)
Q Consensus 157 ~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (349)
+++++++||.|.+..||..++ +........ ....+...+... ..++.. ... ......+..++..++.+.+.
T Consensus 151 ~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~l~~~g~~t~i~ 221 (256)
T TIGR00688 151 ALVLAFSFTAYGLIRKALKNT---DLAGFCLET-LSLMPVAIYYLL-QTDFAT-VQQ---TNPFPIWLLLVLAGLITGTP 221 (256)
T ss_pred HHHHHHHHHHHHHHHhhcCCC---CcchHHHHH-HHHHHHHHHHHH-HhccCc-ccc---cCchhHHHHHHHHHHHHHHH
Confidence 788999999999999997652 222222111 111111111111 111111 000 01112344445555556667
Q ss_pred HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHh
Q 018894 237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVL 270 (349)
Q Consensus 237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~ 270 (349)
+..++.++++.++.+.+...+++|+++.+++.++
T Consensus 222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999999999999999764
No 22
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.84 E-value=2.1e-19 Score=152.35 Aligned_cols=282 Identities=20% Similarity=0.252 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----cCCChHHHHHHHHHHHHHHHHHHHHHcccccc----------------CCCCchh
Q 018894 16 SLSVISSVSIVICNKALISS-----LGFTFATTLTSWHLLVTFCSLHVALWMKLFEH----------------KPFDPRA 74 (349)
Q Consensus 16 ~~~~~~~~~~~~~~K~v~~~-----~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----------------~~~~~~~ 74 (349)
++....++..+++.||.-+. -++++|+..+..-++.-++++.++...|++.. ++.+...
T Consensus 9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l 88 (372)
T KOG3912|consen 9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL 88 (372)
T ss_pred hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence 34556677778899998664 24788999986666666566666654432211 1334456
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc-------
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL------- 147 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~------- 147 (349)
+++.++|...+..+.+.++.+++++.+++++....+||.+++.-+++++++.++|+++.....|++++...|.
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~ 168 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY 168 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence 7778999999999999999999999999999999999999999999999999999999999999998875421
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhh----cccc--cccccccc-
Q 018894 148 ---QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLD----GLLT--NKNVFAFK- 217 (349)
Q Consensus 148 ---~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~----~~~~--~~~~~~~~- 217 (349)
+.-..|+.+.+++.+.-|.+.++.+|..++.+++|.+...|..++|.+++-....... +... ++...-.|
T Consensus 169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~ 248 (372)
T KOG3912|consen 169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW 248 (372)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence 2235799999999999999999999999999999999999999999766544332221 1000 01100001
Q ss_pred --------cCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHH
Q 018894 218 --------YTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIG 289 (349)
Q Consensus 218 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g 289 (349)
..+.....+....+....+|+.-....|..++++-.++..++..+..+++.....|.+...|+.|.++.+.|
T Consensus 249 ~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~G 328 (372)
T KOG3912|consen 249 GDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMG 328 (372)
T ss_pred HHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333333343445677777778999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q 018894 290 MVLYSYCC 297 (349)
Q Consensus 290 ~~l~~~~~ 297 (349)
.++|+-.-
T Consensus 329 i~lY~~il 336 (372)
T KOG3912|consen 329 IILYNQIL 336 (372)
T ss_pred HHHHHHHH
Confidence 99998543
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=5.4e-18 Score=150.00 Aligned_cols=285 Identities=19% Similarity=0.175 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHHcccc---cc--CC---------CCchh
Q 018894 10 GTVGALSLSVISSVSIVICNKALISSLGFTF-ATTLTSWHLLVTFCSLHVALWMKLF---EH--KP---------FDPRA 74 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~---~~--~~---------~~~~~ 74 (349)
.-...+++..+...++.++.|+.-.+.+..+ |.+..++--++-.+++.....+..+ ++ +. .+..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3334555666777888888899887654444 6666666556655555444332211 11 11 11234
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec---c-----
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT---D----- 146 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~---~----- 146 (349)
+...+++|++.+.+.+.++.+.+++++++...+..+.|+++..++++||++++||.++++.+.|+.+...+ +
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 55568899998889999999999999999999999999999999999999999999999999999988731 1
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhH
Q 018894 147 ---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVL 223 (349)
Q Consensus 147 ---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (349)
.+..+.|....+.++++.++..++.+|++|+.+.+-+........+|.++.+......++.......+...++...|
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw 254 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVW 254 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHH
Confidence 22346899999999999999999999999988888888888888888888877666555443333445556777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
.+++..++.+. ..-..+|+.+...-.....+..+++.+.++.+++.++|....+|..+++.++.+|+..+.
T Consensus 255 ~vVl~~a~gGL----lvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 255 LVVLLNAVGGL----LVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHHhccch----hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 88888887773 333457999999999999999999999999999999999999999999999999994443
No 24
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=2e-20 Score=156.55 Aligned_cols=267 Identities=13% Similarity=0.160 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceecccc
Q 018894 17 LSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFN 96 (349)
Q Consensus 17 ~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 96 (349)
+.-.+.++.++.+.++..+ +.+.|...+++.+..-.++..++...|+ +.-+..|++++.+++...=++++...|.||+
T Consensus 25 iLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyT 102 (336)
T KOG2766|consen 25 ILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYIKAKWRHYILLAFVDVEANYFVVKAYQYT 102 (336)
T ss_pred HHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHHHHHHHHhhheeEEeecccEEEeeehhhc
Confidence 3344555667788888875 5777888888888777777666665554 4445567888889999888889999999999
Q ss_pred chhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc--------cccchhHHHHHHHHHHHHHHHH
Q 018894 97 SVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD--------LQLNVLGSVLSLLAVLTTCVAQ 168 (349)
Q Consensus 97 ~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~s~~~~a~~~ 168 (349)
+......+.+-..+.+.+++|+++|.|..+.++.|++++.+|+.+++.+| ......|+++.++++-+||..+
T Consensus 103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN 182 (336)
T KOG2766|consen 103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN 182 (336)
T ss_pred chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence 99999999999999999999999999999999999999999999988744 2234579999999999999999
Q ss_pred HHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 018894 169 IMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTS 248 (349)
Q Consensus 169 v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (349)
+..+.+.| +.|..+++.+..++|+++..+- ++.+... .....|+..+...+. ..+.-|+.+-..-..+|..|
T Consensus 183 v~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~----~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~ 254 (336)
T KOG2766|consen 183 VSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHH----VSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNS 254 (336)
T ss_pred ccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhccc----eeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCC
Confidence 99999999 7799999999999999999887 4454321 122333333333322 44444554555556789999
Q ss_pred cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 249 PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 249 a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
++...+--.....+++++ ..||-+.+|...+..+.+.+|.++|..
T Consensus 255 aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 255 ATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred ceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 999999889999999999 567888999999999999999999953
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=9e-19 Score=145.00 Aligned_cols=255 Identities=16% Similarity=0.230 Sum_probs=206.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHccc-cccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHH
Q 018894 38 FTFATTLTSWHLLVTFCSLHVALWMKL-FEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLE 116 (349)
Q Consensus 38 ~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~ 116 (349)
|.+...+.+.|+....+..-++...|. .+..+.+-+.+...++-+.+.....|.|+++.|-++..+-+++.||-+++++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 667788888888888887766655544 3334445566777788888999999999999999999999999999999999
Q ss_pred HHHhccccchhhhHHHHHhhhhheeeeeccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHh
Q 018894 117 TLFFRKKFSRNIQLSLVILLVGVGIATVTDL-------QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQS 189 (349)
Q Consensus 117 ~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~ 189 (349)
+++.|++.+++++++++.+++|+++.-+.+. ..-..|-++.+.+-...+......+|+.+.+.-+...+++++
T Consensus 130 Vl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~ 209 (337)
T KOG1580|consen 130 VLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYT 209 (337)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHH
Confidence 9999999999999999999999998876421 122469999999999999999999999987777888899999
Q ss_pred hHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHH
Q 018894 190 CPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYV 269 (349)
Q Consensus 190 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~ 269 (349)
++++.+.+.....+ .++......+. .-.+..++-+...++.+.+-+...+..+...||.+.|++.+.+..++++++++
T Consensus 210 NlwStL~Lg~g~lf-TGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl 287 (337)
T KOG1580|consen 210 NLWSTLYLGAGLLF-TGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL 287 (337)
T ss_pred HHHHHHHhhhhhee-hhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence 99998877655443 33322211111 23455666666666666666888899999999999999999999999999999
Q ss_pred hcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 270 LLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 270 ~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
+|+++++.+||+|.++++.|...=.
T Consensus 288 lf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 288 LFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999876543
No 26
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.81 E-value=3.2e-17 Score=141.16 Aligned_cols=273 Identities=16% Similarity=0.168 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-ccccc---cCCCCchhHH---HHHHHHHHH
Q 018894 13 GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLFE---HKPFDPRAVM---GFGVLNGIS 85 (349)
Q Consensus 13 ~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~---~~~~~~~~~~---~~~~~~~~~ 85 (349)
.+...|..++. +-+..|.+-. .+ +..+...|.+-+..++..... .|+.+ .-.++.|.++ ..++..+.+
T Consensus 11 ~~l~Ay~lwG~-lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~n 85 (293)
T COG2962 11 LALLAYLLWGL-LPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLN 85 (293)
T ss_pred HHHHHHHHHHH-HHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444444443 3456676654 23 778888999988876655432 22111 1123333333 335566678
Q ss_pred HhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHH
Q 018894 86 IGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTC 165 (349)
Q Consensus 86 ~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a 165 (349)
...+.||..+-.+-.++.=...+|++.++++.+++|||+|+.|+++++++.+|+..-.+...+.++..+.++ ++|+
T Consensus 86 W~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~sf~ 161 (293)
T COG2962 86 WWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----LSFG 161 (293)
T ss_pred HHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----HHHH
Confidence 888999999977777888888889999999999999999999999999999999998887788888776666 8999
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 018894 166 VAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIG 245 (349)
Q Consensus 166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
+|....|+. ++|+.+-.......-++..+......+...+ +........+.+++..|.++.+--.....+.+
T Consensus 162 ~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~ 233 (293)
T COG2962 162 LYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAK 233 (293)
T ss_pred HHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 999776554 4577777776666655555555444442221 22234566778888899888877667777889
Q ss_pred ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccccc
Q 018894 246 KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQ 302 (349)
Q Consensus 246 ~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~ 302 (349)
+.+-.+.++..|++|....+++++++||+++..+....+++-+|.++|.....++.+
T Consensus 234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r 290 (293)
T COG2962 234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR 290 (293)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999987655433
No 27
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.79 E-value=5.9e-18 Score=149.50 Aligned_cols=214 Identities=18% Similarity=0.162 Sum_probs=177.2
Q ss_pred HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc--------ccchhH
Q 018894 82 NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL--------QLNVLG 153 (349)
Q Consensus 82 ~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~--------~~~~~G 153 (349)
..+.++.++.|+.+++++..+++.+++-+||.+++.++..||+|..+.+++.+.++|++++..++. .....|
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG 248 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG 248 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence 345677889999999999999999999999999999999999999999999999999999998642 223689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc--CCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKF--KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.++++++++.||.|.++.||...++ ++|.-....+..++..+++.|...+.+.. ..+.++.........+++.+.+
T Consensus 249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~--~~e~F~lP~~~q~~~vv~~~li 326 (416)
T KOG2765|consen 249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF--GEERFELPSSTQFSLVVFNNLI 326 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh--ccCcccCCCCceeEeeeHhhHH
Confidence 9999999999999999999988766 46777777777777777777666555432 1122333333334445555566
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
..++..+++.++.-.++|..+++-..++...+++.+.++-+.++++.+++|...|++|..+.++..
T Consensus 327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 666678999999999999999999999999999999999999999999999999999999988643
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.79 E-value=3.8e-18 Score=148.92 Aligned_cols=210 Identities=19% Similarity=0.212 Sum_probs=172.6
Q ss_pred chhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc----
Q 018894 72 PRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL---- 147 (349)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~---- 147 (349)
..++...++++.+.+.+.+.+++++++++++++.++..++|++++++++|+|++++||.|+++.+.|+.+...++.
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~ 96 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSD 96 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccc
Confidence 3456667899999999999999999999999999999999999999999999999999999999999999865221
Q ss_pred -----c--------cchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccccccccc
Q 018894 148 -----Q--------LNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVF 214 (349)
Q Consensus 148 -----~--------~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~ 214 (349)
. ....|+++.++++++.|+..|+.||.+|+.+.+.+....+...++.++.++.....++.......+
T Consensus 97 ~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~ 176 (244)
T PF04142_consen 97 NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF 176 (244)
T ss_pred cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Confidence 1 125799999999999999999999999988878888888888888888776655444332222333
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHH
Q 018894 215 AFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILI 285 (349)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~l 285 (349)
...++...+..+...++.+ ...-..+|+.+...-+....+..+++.+.++++|+.++|....+|..+
T Consensus 177 f~G~~~~~~~~i~~~a~gG----llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 177 FHGYSWWVWIVIFLQAIGG----LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred hhhcchHHHHHHHHHHHhh----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 3445555555555555555 444456899999999999999999999999999999999999999765
No 29
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=9.9e-18 Score=141.66 Aligned_cols=287 Identities=16% Similarity=0.135 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhh
Q 018894 10 GTVGALSLSVISSVSIVICNKALISSLGFT-FATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGL 88 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (349)
+-++...-..+.......+..++++..+|. +.|.+++.|+++-..+.+..+..-..+++..+||.+..++.+....+.+
T Consensus 43 QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGL 122 (367)
T KOG1582|consen 43 QFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGL 122 (367)
T ss_pred hHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhcccc
Confidence 333444444555555667889999988887 7999999998886655555544444455677899999999999999999
Q ss_pred cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc----cccchhHHHHHHHHHHHH
Q 018894 89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD----LQLNVLGSVLSLLAVLTT 164 (349)
Q Consensus 89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s~~~~ 164 (349)
.+-++.|++-+...+++++..+-+++.+.++=+.|..++++.+..+..+|.++....| .++|..|+.+.-.+-++.
T Consensus 123 sn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~D 202 (367)
T KOG1582|consen 123 SNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLAD 202 (367)
T ss_pred CcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887654 467789999999999999
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhh
Q 018894 165 CVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVI 244 (349)
Q Consensus 165 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
|+-.-..++.++..+.+..++.+|....|.+.++....... +..+...+..+++........+-++.+++-.......+
T Consensus 203 A~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTg-e~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI 281 (367)
T KOG1582|consen 203 AVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTG-ELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALI 281 (367)
T ss_pred HHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcc-cchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHH
Confidence 99888999999988888999999999999988876655433 33333334445555566666666666665566666678
Q ss_pred cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 245 GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 245 ~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
+..||..++.+.+.+..+++++++++|..|+|....-|..+++.|+++-.+.+
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 89999999999999999999999999999999999999999999998865544
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.78 E-value=6.7e-20 Score=154.45 Aligned_cols=265 Identities=13% Similarity=0.102 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc--cCCCCchhHHHHHHHHHHHHhhcceecccc
Q 018894 19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE--HKPFDPRAVMGFGVLNGISIGLLNLSLGFN 96 (349)
Q Consensus 19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 96 (349)
+.++.++.+..|.+-.+ |......|+.+-.+...++...++.. -++..++.++..++....+....++|++|.
T Consensus 47 ~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~m 121 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYM 121 (346)
T ss_pred HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhc
Confidence 66677776655555442 77777788555444444443333222 234455666666887778888889999999
Q ss_pred chhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec-----cc---------ccchhHHHHHHHHHH
Q 018894 97 SVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT-----DL---------QLNVLGSVLSLLAVL 162 (349)
Q Consensus 97 ~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~-----~~---------~~~~~G~~~~l~s~~ 162 (349)
+.+.+.++..++|.+|.++++.++|||.|+.+.++..+.+.|+++++.+ +. +.+..|.+.++.+.+
T Consensus 122 slaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~l 201 (346)
T KOG4510|consen 122 SLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVL 201 (346)
T ss_pred chhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHh
Confidence 9999999999999999999999999999999999999999999998742 11 224568888999999
Q ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 018894 163 TTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFL 242 (349)
Q Consensus 163 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (349)
..|.-.++.|++.| +.|....+.|...++.+..++....... +.+.+....+++++..|++++..+.....
T Consensus 202 f~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~-------~~lP~cgkdr~l~~~lGvfgfigQIllTm 272 (346)
T KOG4510|consen 202 FGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGA-------VQLPHCGKDRWLFVNLGVFGFIGQILLTM 272 (346)
T ss_pred hhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccc-------eecCccccceEEEEEehhhhhHHHHHHHH
Confidence 98888889999888 5566666667777777666655443331 22334555667778888889888999999
Q ss_pred hhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 243 VIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 243 ~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
.+++=-|...++..+.+.+++.+..+++|+|-+|++.|.|+++++.+.++....|
T Consensus 273 ~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 273 GLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 9999888889999999999999999999999999999999888887776665433
No 31
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=6.9e-18 Score=143.08 Aligned_cols=271 Identities=14% Similarity=0.175 Sum_probs=209.3
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccc-cchhHHHHHhh
Q 018894 28 CNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGF-NSVGFYQMTKL 106 (349)
Q Consensus 28 ~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~s~~~~l~~ 106 (349)
.-..+.+. +...-..+++.|+++-..-.+++...-...+++.+.|.+......+...+.+.|.++++ +|.+...++++
T Consensus 21 ~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs 99 (330)
T KOG1583|consen 21 FLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS 99 (330)
T ss_pred HHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence 33444443 44556889999998876655555422222336778888988888888888999999987 89999999999
Q ss_pred hHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec---cc---------c---cc----hhHHHHHHHHHHHHHHH
Q 018894 107 AIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT---DL---------Q---LN----VLGSVLSLLAVLTTCVA 167 (349)
Q Consensus 107 ~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~---~~---------~---~~----~~G~~~~l~s~~~~a~~ 167 (349)
..++.++++++++.|+|+|.+|+.+++.+.+|+++.... |. + .+ ..|+.+...+.+..|..
T Consensus 100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988641 11 0 11 26999999999999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHH-Hhhhccc---ccc-cccc-c-ccCchhHHHHHHHHHHHHHHHHHH
Q 018894 168 QIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIG-PFLDGLL---TNK-NVFA-F-KYTPYVLFFIVLSCLISVSVNFST 240 (349)
Q Consensus 168 ~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-~~~~~~~---~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 240 (349)
.++.+...++++-++-+.++|......+.++... .+...+. ..+ ...+ . ..-+..|+.++.+++.-+..--..
T Consensus 180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgV 259 (330)
T KOG1583|consen 180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGV 259 (330)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988876665432 1111110 000 0000 0 114566777777777776555555
Q ss_pred HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
+....++++.+.+++-++|..++.+++++.|++++|+..|+|..++..|.++|.-...+
T Consensus 260 y~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~ 318 (330)
T KOG1583|consen 260 YILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH 318 (330)
T ss_pred hhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66678899999999999999999999999999999999999999999999999865443
No 32
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.77 E-value=1.9e-16 Score=142.78 Aligned_cols=260 Identities=15% Similarity=0.141 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHH----HHHHHH
Q 018894 9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGF----GVLNGI 84 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 84 (349)
.....+++.|+..++. .|.+. +.+.++.. |+.++.+++..+....+.+ +.+.+..+.. |++...
T Consensus 4 l~~lia~~~wGs~g~~----~k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~w~i 71 (290)
T TIGR00776 4 LIALIPALFWGSFVLI----NVKIG---GGPYSQTL---GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAFWAL 71 (290)
T ss_pred HHHHHHHHHHhhhHHH----HhccC---CCHHHHHH---HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHHHHh
Confidence 3445566667766653 35443 45555443 6777776655443321111 1232444443 344666
Q ss_pred HHhhcceeccccchhHHHHHhh-hHHHHHHHHHHHHhccccchhh----hHHHHHhhhhheeeeecccc-------cc-h
Q 018894 85 SIGLLNLSLGFNSVGFYQMTKL-AIIPCTILLETLFFRKKFSRNI----QLSLVILLVGVGIATVTDLQ-------LN-V 151 (349)
Q Consensus 85 ~~~~~~~al~~~~~s~~~~l~~-~~pi~~~~l~~~~~~e~~s~~~----~~~i~l~~~Gv~l~~~~~~~-------~~-~ 151 (349)
++.+++.+.++++.+.+..+.+ +.|++..+.+.+++||+.++++ +.|+++.++|+.+....+.+ .+ .
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~ 151 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK 151 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence 7789999999999999988888 8889999999999999999999 99999999999998753211 33 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHH---HHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLL---YQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVL 228 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~---~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (349)
.|++++++++++|+.|.+..|+. +.+|.... .+....++.+..+.. ... . +. .....+..+.
T Consensus 152 ~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-----~--~~--~~~~~~~~~~ 216 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA-----K--PL--KKYAILLNIL 216 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--hcc-----c--ch--HHHHHHHHHH
Confidence 79999999999999999999975 24777763 333333333332211 000 0 01 1222233344
Q ss_pred HHHHHHHHHHHHHHhhc-ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHHHhh
Q 018894 229 SCLISVSVNFSTFLVIG-KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVLYSY 295 (349)
Q Consensus 229 ~~~~~~~~~~~~~~~~~-~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l~~~ 295 (349)
.|++....+..++...+ +.++.+.+++.+.+|+.+.+.++++++|+.+..|+ +|+++++.|+.+...
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 66666566667777788 99999999999999999999999999999999999 999999999988754
No 33
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.71 E-value=2.1e-16 Score=129.12 Aligned_cols=143 Identities=31% Similarity=0.574 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccc-----cCchh
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKK-----FKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFK-----YTPYV 222 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~-----~~~~~ 222 (349)
|++++++++++.|++.++.|+..++ .+.++.+++.++++.+++++++..+..|++.......... .....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999988 5899999999999999999999998888765332222111 14467
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 223 LFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
+..++.++++++.+++..++++++++|++.++++.+|.+..+++++++|+|++|+.+++|+++.++|.++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999974
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.36 E-value=3.9e-12 Score=110.43 Aligned_cols=194 Identities=19% Similarity=0.116 Sum_probs=131.5
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec--------------------cc-------c
Q 018894 96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT--------------------DL-------Q 148 (349)
Q Consensus 96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~--------------------~~-------~ 148 (349)
++.+.....++..++++++..+.+.++|++..++++.++...|++....+ +. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 46677888888899999999888888888888888888888887743221 10 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHH
Q 018894 149 LNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVL 228 (349)
Q Consensus 149 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (349)
....|....+.+.++.++..++.++..|+++...+........++.+.........+........+...++...+..++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL 161 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence 23567777888888889999999998876543333333333333333222111111111111111112233333333333
Q ss_pred HHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894 229 SCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY 293 (349)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~ 293 (349)
...+ +....+.+|+.++...+....++++++.++++++|||+++..++.|+.+++.|+.+|
T Consensus 162 -~a~~---~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 162 -NVGG---GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred -HHhc---CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 3333 455677899999999999999999999999999999999999999999999998765
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.31 E-value=3.6e-11 Score=90.76 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
..++++.+++++++..++.|-..+ ++||............+++.........+... .+.++..+..++.+|+.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSGla 76 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSGLA 76 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHHHH
Confidence 468899999999999999999998 77898888888877777776665544433221 22455567778888888
Q ss_pred HHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 233 SVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
+....+.+|+++|...+.....+.-+.+++++++++++++|++|..+++|++++++|.++.+
T Consensus 77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88888899999999999999999999999999999999999999999999999999987654
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.16 E-value=2.8e-10 Score=89.16 Aligned_cols=124 Identities=20% Similarity=0.379 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHH
Q 018894 162 LTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFST 240 (349)
Q Consensus 162 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (349)
++||.+.+..|+..+ +.|+.....+....+.+ +++.....+... ....+...+......+++ ....+...
T Consensus 1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYLLY 71 (126)
T ss_pred ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHHHH
Confidence 468899999999999 47999999999998887 655555444322 111222223333333433 45567788
Q ss_pred HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
++++++.++...+.+.+++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus 72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999998764
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.12 E-value=6.6e-10 Score=84.01 Aligned_cols=128 Identities=16% Similarity=0.157 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc-cccc----CCCCchhHHHHHHHHHHHHhh
Q 018894 14 ALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK-LFEH----KPFDPRAVMGFGVLNGISIGL 88 (349)
Q Consensus 14 ~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~ 88 (349)
+.++...+.....+..|.-+++.+ |.+.++.|-++..+.+..+.... +... .++.|..+..-|+..+++..+
T Consensus 7 ~ALLsA~fa~L~~iF~KIGl~~vd---p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~ 83 (140)
T COG2510 7 YALLSALFAGLTPIFAKIGLEGVD---PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHhccccC---ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence 334444555556678898888544 88999999998888776665433 2222 233344444457777889999
Q ss_pred cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
++.|++...+|...-+..++|+++++++++++|||+|.++|+|++++++|+++.+.
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999998763
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.12 E-value=1.9e-10 Score=93.46 Aligned_cols=215 Identities=11% Similarity=0.039 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc--cccch
Q 018894 74 AVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD--LQLNV 151 (349)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~--~~~~~ 151 (349)
+..+.+++....++.+..|++.++++.++.+..++--|+.+++++.+|+|+...++++.++.+.|++++.+-| ...++
T Consensus 55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~ 134 (290)
T KOG4314|consen 55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEI 134 (290)
T ss_pred eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhh
Confidence 4445567777888899999999999999999999999999999999999999999999999999999998744 56678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHH----HHHH-hhhcccccccccccccCchhHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLF----IIGP-FLDGLLTNKNVFAFKYTPYVLFFI 226 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 226 (349)
.|+..++.++...|+|-|..|+.....+. -....+++..|..-+. +... .+.+ .+.+. +.....|..+
T Consensus 135 iGi~~AV~SA~~aAlYKV~FK~~iGnAn~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~----VE~~q-sFA~~PWG~l 207 (290)
T KOG4314|consen 135 IGIACAVGSAFMAALYKVLFKMFIGNANF--GDAAHFMSCLGFFNLCFISFPALILAFTG----VEHLQ-SFAAAPWGCL 207 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhc----hHHHH-HHhhCCchhh
Confidence 99999999999999999999999874432 2233333333332211 1111 1111 00000 0111123344
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 227 VLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
.....+....++..+..+....|...|+=.......-..++.++-+-..+...+.|-.++++|.++.-.
T Consensus 208 ~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii 276 (290)
T KOG4314|consen 208 CGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII 276 (290)
T ss_pred hhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence 444555555677777778888888888777777777778888766668889999999999999988754
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.08 E-value=3.2e-10 Score=88.82 Aligned_cols=115 Identities=17% Similarity=0.269 Sum_probs=90.8
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHc-cc---cccCCCCchhHHHHHHH-HHHHHhhcceeccccchh
Q 018894 25 IVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWM-KL---FEHKPFDPRAVMGFGVL-NGISIGLLNLSLGFNSVG 99 (349)
Q Consensus 25 ~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~s 99 (349)
...++|...++ .+ |....++|+..+.+ +..+... ++ .+.++.++......+++ ..++..+.+.++++++++
T Consensus 6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 81 (126)
T PF00892_consen 6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS 81 (126)
T ss_pred HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence 45678888884 33 78899999999996 4333222 22 22233444555556666 477889999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 100 FYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 100 ~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
.++++.++.|+++.+++++++||+++.+++.|++++++|+.+..
T Consensus 82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998653
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.05 E-value=6.2e-10 Score=85.83 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHcc-cc-----ccCCCCchhHHHHHHHHH-HHHhhcceeccccchhHHHHHhhhHHHHHHHHHHH
Q 018894 46 SWHLLVTFCSLHVALWMK-LF-----EHKPFDPRAVMGFGVLNG-ISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETL 118 (349)
Q Consensus 46 ~~r~~~~~l~l~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~ 118 (349)
.+|+..+.+++..+...+ +. ..+++++..+...+++.. .+..+.++|+++.+ +.+..+.+++|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 478888887776654332 11 113344555556677665 78889999999999 58889999999999999999
Q ss_pred HhccccchhhhHHHHHhhhhheeeeecccc
Q 018894 119 FFRKKFSRNIQLSLVILLVGVGIATVTDLQ 148 (349)
Q Consensus 119 ~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~ 148 (349)
++|||++++++.+++++++|++++.+++.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887643
No 41
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.95 E-value=1.8e-08 Score=89.50 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.|..+.++++++|+...+..|. .. +++|.++.++.+.++++++++.......................+..+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 4889999999999999999997 44 58999999999999887776554332211000000000011122344556666
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
+....+...++++++.++..++++.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 666677788889999999999999999999999999999999999999999999999988654
No 42
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=1.1e-07 Score=83.07 Aligned_cols=202 Identities=18% Similarity=0.160 Sum_probs=145.8
Q ss_pred HHHHHHHHHHhhcceeccccchhHHHHHh-hhHHHHHHHHHHHHhccccchhhhH----HHHHhhhhheeeeeccccc--
Q 018894 77 GFGVLNGISIGLLNLSLGFNSVGFYQMTK-LAIIPCTILLETLFFRKKFSRNIQL----SLVILLVGVGIATVTDLQL-- 149 (349)
Q Consensus 77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pi~~~~l~~~~~~e~~s~~~~~----~i~l~~~Gv~l~~~~~~~~-- 149 (349)
..|++..++....+.++++.++|.+--+. ...-+.+.+.++++++|.-+..++. +++++++|+.+.+..|.+.
T Consensus 50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence 34677788889999999999888866555 5667778999999999998877754 8889999999988754221
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhH
Q 018894 150 ------NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVL 223 (349)
Q Consensus 150 ------~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (349)
...|+...+++.+.|..|.+..|.. +.|++...+=++ .+.++......... . ...... ..
T Consensus 130 ~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqa-iGm~i~a~i~~~~~-~----~~~~~k----~~ 195 (269)
T PF06800_consen 130 SSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQA-IGMLIGAFIFNLFS-K----KPFFEK----KS 195 (269)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHH-HHHHHHHHHHhhcc-c----cccccc----ch
Confidence 2469999999999999999997763 457777666443 23333222221111 0 011111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHH
Q 018894 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVL 292 (349)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l 292 (349)
+.-+.+|++-...+..++...++.+....=.+..+..+++.+.+.++++|+-+.+++ +|++++++|.++
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 344556666666677777788899999888999999999999999999998886644 588888888754
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.90 E-value=4.7e-08 Score=88.65 Aligned_cols=141 Identities=13% Similarity=0.183 Sum_probs=108.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHH
Q 018894 148 QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIV 227 (349)
Q Consensus 148 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (349)
+....|.++.++++++|+...+..|.. . +.+|.++.++...++.+++++........... .....+...+....
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 77 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYL---KTLIQTPQKIFMLA 77 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHH---HHHHcCHHHHHHHH
Confidence 334579999999999999999999764 4 58999999999999887776554322111000 00001222333344
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
..++....++...++++++.++...++..++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 5555555667888899999999999999999999999999999999999999999999999998764
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.76 E-value=3.1e-07 Score=82.71 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS 233 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (349)
+.+.+.+++++|.+.+.+||..+++ ++. ..+....+++.+++.......... +. ......+...+..++..
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 73 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQVG----WS-RLPATFWLLLAISAVAN 73 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccCC----CC-CcchhhHHHHHHHHHHH
Confidence 5678999999999999999887742 343 344445555555554432110000 00 01122344556666666
Q ss_pred HHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 234 VSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
..+....+.+.++.++...+.+.+..|+++.++++++++|+++..+++|+++++.|+.+...
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 67777888899999999999999999999999999999999999999999999999987654
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.69 E-value=4.9e-07 Score=80.33 Aligned_cols=130 Identities=18% Similarity=0.105 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCch---hHHHHHHH-HHH
Q 018894 9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPR---AVMGFGVL-NGI 84 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~ 84 (349)
.......++-.++.....+..|...++.+ +.+.....+++.++.+++.+.......+.. .+.+ ..+..+++ ..+
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEG-PELLQFTGWVLLLGALLLLPFAWFLGPNPQ-ALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHH
Confidence 33444444555555556677888876433 223455557888888877766544322221 1222 23444554 356
Q ss_pred HHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhe
Q 018894 85 SIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVG 140 (349)
Q Consensus 85 ~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~ 140 (349)
...++++++++.+++.++.+.++.|++++++++++++|+++..++.|..+++.|+.
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 77889999999999999999999999999999999999999999999999999873
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.69 E-value=6e-07 Score=83.18 Aligned_cols=138 Identities=12% Similarity=0.128 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.-+..++...++|+.+.++.|...+ .+++|....++.+.++++++++.....+..... + ..++..+..+...++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~----~-~~~~~~~~~l~l~g~ 86 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL----P-PLSVSILSKIGLLGF 86 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc----C-cchHHHHHHHHHHHH
Confidence 4567788889999999999999996 478999999999999988888776544321110 0 112223344455555
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHh------cCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVL------LHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~------~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
+++.++...+..++++++..++++.++.|+++.++++++ ++|+++..+++|+++.++|+.+...
T Consensus 87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 555566678889999999999999999999999999999 6999999999999999999987654
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.60 E-value=1.3e-06 Score=78.91 Aligned_cols=210 Identities=13% Similarity=0.168 Sum_probs=118.1
Q ss_pred HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cc-cc-----
Q 018894 80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQ-LN----- 150 (349)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~-~~----- 150 (349)
+.+.++..+.+.|+.+.|.+..+-+.....++.++++..++|||++++++.|..+++.|..+++... .+ .+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 4456778888999999999999999999999999999999999999999999999999999765411 11 10
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHH---HHHhhhcccccccccccccCc
Q 018894 151 -------VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFI---IGPFLDGLLTNKNVFAFKYTP 220 (349)
Q Consensus 151 -------~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~---~~~~~~~~~~~~~~~~~~~~~ 220 (349)
+..+...... +...+.....+|..++ +..........+++...+. ............+. . ..+
T Consensus 138 ~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~---~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~--f-~~~ 210 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR---NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQ--F-TYP 210 (300)
T ss_pred HHhcCcceehhHHHHHH-HHHHHHHhhcchhccc---ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchh--h-hhh
Confidence 1111111111 1112222222222221 1111111111112111110 00001100000111 1 223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhh-hHHHHHHHHHHhcCC--CCchh----hhhhHHHHHHHHHHH
Q 018894 221 YVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHL-KTCLVLAFGYVLLHD--PFSWR----NILGILIAVIGMVLY 293 (349)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~~~~~~~~~e--~~t~~----~~~G~~lii~g~~l~ 293 (349)
..+.+++.........-...+.++++.++.....+.+. -...+++-|.++|+| ..+.. ...|..+++.|+.+.
T Consensus 211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL 290 (300)
T PF05653_consen 211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL 290 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence 33333333333333344467788998887766555543 456778888888887 45553 345788888888877
Q ss_pred hhh
Q 018894 294 SYC 296 (349)
Q Consensus 294 ~~~ 296 (349)
+..
T Consensus 291 ~~~ 293 (300)
T PF05653_consen 291 SSS 293 (300)
T ss_pred ecc
Confidence 643
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.36 E-value=1.2e-05 Score=72.96 Aligned_cols=130 Identities=14% Similarity=0.197 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.+++.+++++++|+...+..|...+ +++|.....+....+.+++++.. ..+ . .. +..+ ..++..++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~~~-~----~~-~~~~---~~~~~~~l 69 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---GFP-R----LR-QFPK---RYLLAGGL 69 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---ccc-c----cc-cccH---HHHHHHhH
Confidence 4677899999999999999999888 67999999999888877766432 110 0 00 1111 12223333
Q ss_pred HHHHHHHHHHHhh----cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 232 ISVSVNFSTFLVI----GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 232 ~~~~~~~~~~~~~----~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
....+....+... +..++...+++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus 70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence 3333343333333 456778889999999999999999999999999999999999999987753
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.33 E-value=2e-05 Score=71.39 Aligned_cols=130 Identities=12% Similarity=-0.051 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS 233 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (349)
++..++-.+.|+...+..|...+ +.+|.....+....+++++++........ . .+...+......|.+.
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--------~~~~~~~~~~~~g~~~ 78 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-L--------PTLRQWLNAALIGLLL 78 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--------CcHHHHHHHHHHHHHH
Confidence 34467778999999999998877 78999999999999988877664322111 0 0112233333344333
Q ss_pred -HHHHHHHHHhh-cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 234 -VSVNFSTFLVI-GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 234 -~~~~~~~~~~~-~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
..++...+.+. ++.++...+++.++.|+++.+++.+ ++|+++..+++|+++.++|+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence 23344555666 8888888999999999999999985 7999999999999999999988754
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.33 E-value=2e-05 Score=61.78 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.|+++.+.+.++.+...++.|+-+++.+. .+.... . . ..+ . ...+ +....+..+....
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~-~---~~~-~-~~~~-------------p~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-F-I---AAL-L-AFGL-------------ALRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-H-H---HHH-H-HHhc-------------cHHHHHHHHHHHH
Confidence 47889999999999999999998875432 111110 0 0 000 0 0000 0001122222223
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHH--hcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYV--LLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~--~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
+ ..+.+..++++.+...+..+....++...+.++. +|||++|+.+++|++++++|+++.++.
T Consensus 60 l---a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 60 L---SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred H---HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3 3567778899999999888888888777777774 899999999999999999999998753
No 51
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.33 E-value=4.9e-06 Score=63.57 Aligned_cols=64 Identities=16% Similarity=0.089 Sum_probs=59.1
Q ss_pred HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
+++++..++...++++.|.+.+..+.++.++++++.+++++|||++.++++|+.++++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4466788888999999999999999999999999999999999999999999999999998764
No 52
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.29 E-value=0.00047 Score=63.04 Aligned_cols=220 Identities=14% Similarity=0.076 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhcccc---ch----hhhHHHHHhhhhheeeee--
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKF---SR----NIQLSLVILLVGVGIATV-- 144 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~---s~----~~~~~i~l~~~Gv~l~~~-- 144 (349)
-+..|++..+++.....++++..+|... +-..+.-+...++..++++|-. +. .-..|++++++|+++.+.
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344677788888999999999998865 4456778888888888888643 32 357888899999998876
Q ss_pred --ccc--------ccc-hhHHHHHHHHHHHHHHHH-------HHHHHHHhhcCCCHHHHHHHhhH---HHHHHHHHHHHh
Q 018894 145 --TDL--------QLN-VLGSVLSLLAVLTTCVAQ-------IMTNTIQKKFKVSSTQLLYQSCP---YQALTLFIIGPF 203 (349)
Q Consensus 145 --~~~--------~~~-~~G~~~~l~s~~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~ 203 (349)
.|. +.+ ..|+++++++.+.++.|. ...+... +.+.++.....-... .+..+.-.....
T Consensus 156 ~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~ 234 (345)
T PRK13499 156 QLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCF 234 (345)
T ss_pred hhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 122 479999999999999999 4333321 134555544443332 222222111111
Q ss_pred hh-cccccccccc-cccC----chhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhh----hhhhhHHHHHHHHHHhcCC
Q 018894 204 LD-GLLTNKNVFA-FKYT----PYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQV----LGHLKTCLVLAFGYVLLHD 273 (349)
Q Consensus 204 ~~-~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~----~~~~~~v~~~~~~~~~~~e 273 (349)
.. .-....+... .... .....+.+..|++=+..+..+....++.+.....+ ...+..+++.+.+. +++|
T Consensus 235 ~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE 313 (345)
T PRK13499 235 IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKE 313 (345)
T ss_pred HHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhh
Confidence 10 0001100011 1111 22333445555555555555655566664443333 33666688888898 4999
Q ss_pred CCc------hhhhhhHHHHHHHHHHHhhh
Q 018894 274 PFS------WRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 274 ~~t------~~~~~G~~lii~g~~l~~~~ 296 (349)
.-+ ...++|++++++|..+....
T Consensus 314 ~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 314 WKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 766 66688999999999887654
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.25 E-value=3.7e-05 Score=69.89 Aligned_cols=125 Identities=13% Similarity=0.096 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS 233 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (349)
.++.++++++|+...+..|...+ +++|....++...++++.+++.. ... .... ......++..
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~---~~~---------~~~~---~~~~~~g~~~ 68 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFV---ARP---------KVPL---NLLLGYGLTI 68 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHh---cCC---------CCch---HHHHHHHHHH
Confidence 35688899999999999998887 68999999999887765544322 100 0011 1122223322
Q ss_pred H-HHHHHHHHhhcc-cCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 234 V-SVNFSTFLVIGK-TSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 234 ~-~~~~~~~~~~~~-~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
. .+....+...++ .++...+++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus 69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 2 223344455665 5777888899999999999999999999999999999999999987753
No 54
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.20 E-value=2.1e-05 Score=71.19 Aligned_cols=127 Identities=7% Similarity=-0.049 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchh---HHHHHHHH-HHHHhh
Q 018894 13 GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRA---VMGFGVLN-GISIGL 88 (349)
Q Consensus 13 ~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~ 88 (349)
...+.-.++.....++.|...+++ + |.... +...++.+++.+....... ....++.. .+..+++. .+.+.+
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~~~--~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGAEH--G-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--C-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445566777776532 2 44554 4445555555444332211 11122222 23455543 467778
Q ss_pred cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
+++++++.+++.++++.++.|++..++++++++|+++..+++|..++++|++....
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999987754
No 55
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.19 E-value=7e-05 Score=69.53 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKFKVS-STQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
..+.++--.+...+++..|...++ .+ |+.+..+...++.+...+.... +....+. .+.....+..++..+++
T Consensus 51 ~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~--~~~~~~~---~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 51 ALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT--GFRKIPR---IKSLKLFLKNFLPQGLC 123 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh--CCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 334444444445678888888884 56 9999999998887765544321 1111000 11111233445555555
Q ss_pred HHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 233 SVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
....+...+.++++.++..+.++..+.|++++++++++++|+++..++.|+++++.|+.+...
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 554455566889999999999999999999999999999999999999999999999998654
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.14 E-value=9.2e-05 Score=67.35 Aligned_cols=124 Identities=14% Similarity=0.138 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 018894 163 TTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFL 242 (349)
Q Consensus 163 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (349)
+...++++.|...++. ..|..+.......+.+...+... .+.... ...+...+..++..+++...+....+.
T Consensus 13 ~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS--SGLPKR-----LKISSALLKLLLPVAIVHTIGHVTSNV 84 (302)
T ss_pred HHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH--hCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566778888743 46888888877776655543311 111111 112233444555566666666778889
Q ss_pred hhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 243 VIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 243 ~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
.+++.++...+++..+.|+++.++++++++|+++..++.|++++++|+.+..
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999997653
No 57
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.14 E-value=6.3e-05 Score=65.79 Aligned_cols=141 Identities=13% Similarity=0.165 Sum_probs=110.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894 150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS 229 (349)
Q Consensus 150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (349)
+..|+++++.+-+.|+.--.+.|-+. +.++.++..+..+.+.++++........+... .....++..+.....+
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~---~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWREL---KQLLKQPKTLLMLALT 78 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HHHHhCcHHHHHHHHH
Confidence 45799999999999999888887765 46899999999999888877666554433221 1223455566666666
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
++.-..-.....|+........+|.=.++.|.+.++.|.++++|+++..|++..++..+|+..-.+.
T Consensus 79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 6665555556668899999999999999999999999999999999999999999999999875543
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.14 E-value=4.8e-05 Score=61.73 Aligned_cols=126 Identities=18% Similarity=0.096 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHHHc-cccc-------cCC--C--C---chhHHHH
Q 018894 18 SVISSVSIVICNKALISSL----GFTFATTLTSWHLLVTFCSLHVALWM-KLFE-------HKP--F--D---PRAVMGF 78 (349)
Q Consensus 18 ~~~~~~~~~~~~K~v~~~~----~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~-------~~~--~--~---~~~~~~~ 78 (349)
..++...-.++.|..+++. .-..|..+..+.-..+.+++.+.... +..+ ..+ . + +...+..
T Consensus 8 s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
T PF03151_consen 8 SSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS 87 (153)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence 3344444556777777762 22336666667777777666655332 1111 011 0 1 1122233
Q ss_pred HHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 79 GVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
+++..+.+...+..++++++-+.+++.....+++.++++++++|+++..++.|+++.++|+.+..
T Consensus 88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 55666788899999999999999999999999999999999999999999999999999998754
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.04 E-value=5.7e-05 Score=58.03 Aligned_cols=71 Identities=17% Similarity=0.344 Sum_probs=59.2
Q ss_pred HHHHHHHHH-HHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 226 IVLSCLISV-SVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
.+..+++.. ..+...+++.++.++ ..+....+.|+++.+++.++++|+++..++.|.+++.+|+.+....+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 344444443 556777788899885 77799999999999999999999999999999999999999987653
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.95 E-value=0.00028 Score=53.89 Aligned_cols=58 Identities=21% Similarity=0.187 Sum_probs=51.7
Q ss_pred HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
.+....++++.+...+...-.+.++.+.+.++++|||++|+.+++|+++++.|+.+..
T Consensus 51 ~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4455667889998888888889999999999999999999999999999999998764
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.95 E-value=0.00012 Score=66.06 Aligned_cols=131 Identities=15% Similarity=0.099 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
|++++++++++|+...+..|+.. +.++.+... ..++.++..........+. ...+..+...+.+|+.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~~--------~~~~~~~~~g~l~G~~ 68 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLPE--------FWALSIFLVGLLSGAF 68 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCCc--------ccccHHHHHHHHHHHH
Confidence 67899999999999999998865 445555542 3334443333322222110 1124445556666666
Q ss_pred HHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCCCCchhh----hhhHHHHHHHHHHHhhh
Q 018894 233 SVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHDPFSWRN----ILGILIAVIGMVLYSYC 296 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e~~t~~~----~~G~~lii~g~~l~~~~ 296 (349)
=...++.++.++++.+....-.+.+ +.+++..+.+.++++|+.+..+ ++|.+++++|+.+....
T Consensus 69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 5566788888999988888877767 8888999999999999999999 99999999998887543
No 62
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.89 E-value=0.00053 Score=54.51 Aligned_cols=132 Identities=20% Similarity=0.210 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
..++++.+.++-+.+..+.-++.++.+ +|+...+..+..+.+.+.....+.+.. .. +.....-++...+|++
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~------~~~~~~p~w~~lGG~l 73 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL------ASLSSVPWWAYLGGLL 73 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc------chhccCChHHhccHHH
Confidence 357888999999999999999988654 699999999999998888777666543 11 1111122445558888
Q ss_pred HHHHHHHHHHhhcccCcchhhhhhhhh-HHHHHHHHHH----hcCCCCchhhhhhHHHHHHHHHH
Q 018894 233 SVSVNFSTFLVIGKTSPVTYQVLGHLK-TCLVLAFGYV----LLHDPFSWRNILGILIAVIGMVL 292 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~-~v~~~~~~~~----~~~e~~t~~~~~G~~lii~g~~l 292 (349)
+..+-......+++.++.....+...- -+.+.+++.+ .-++++++.+++|.+++++|+.+
T Consensus 74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 888888888889999999888777664 4467777775 23568999999999999999863
No 63
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.89 E-value=0.00035 Score=63.62 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhhcCCC--HHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 018894 164 TCVAQIMTNTIQKKFKVS--STQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTF 241 (349)
Q Consensus 164 ~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (349)
+..+.+..+++.++.... |..+.+.+....++...+......... .....+.-....+++.+......+
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---------SRKIPLKKYAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---------CCcChHHHHHHHHHHHHHHHHHHH
Confidence 345678888888865545 777777777666655554433222010 011112222333444555567788
Q ss_pred HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
.++++.+..+..+....+++.+++++.++++++.+..++.+.+++.+|+.+....+.+.
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 88999999999999999999999999999999999999999999999999998765443
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.85 E-value=0.00036 Score=54.72 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHH--HhccccchhhhHHHHHhhhhheeeeec
Q 018894 76 MGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETL--FFRKKFSRNIQLSLVILLVGVGIATVT 145 (349)
Q Consensus 76 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~--~~~e~~s~~~~~~i~l~~~Gv~l~~~~ 145 (349)
...-+++++..++++.++++.+++.+..+.+..+.++.+.++. ++||++|..+++|+.++++|+.++..+
T Consensus 52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3344567888999999999999999999999999888888885 899999999999999999999987653
No 65
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.70 E-value=0.0018 Score=58.01 Aligned_cols=141 Identities=21% Similarity=0.127 Sum_probs=97.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHH
Q 018894 151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSC 230 (349)
Q Consensus 151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (349)
..+....++.++.++......|...++ ..+...........+.+...+... .+ .... .. .... .....+..+
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~-~~~~-~~~~~~~~~ 77 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLL-LE-PRGL---RP-ALRP-WLLLLLLAL 77 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHH-hh-cccc---cc-cccc-hHHHHHHHH
Confidence 457788888889999999988888774 244555555455444444221111 11 0000 00 0111 234455555
Q ss_pred HHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHH-HhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 231 LISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY-VLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~-~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
+.........+..+++.++...+...+..|++..+++. ++++|+++..++.|..+.+.|+.+.......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 55555667777889999999999999999999999996 7779999999999999999999998765443
No 66
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.67 E-value=0.00011 Score=64.07 Aligned_cols=133 Identities=16% Similarity=0.205 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
|++.+++|+++++...|=.||.-. -|++..+.+++....+..++...+.+. +.+..+..++|.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~-------------p~f~p~amlgG~l 64 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGF-------------PPFYPWAMLGGAL 64 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCC-------------CcceeHHHhhhhh
Confidence 677889999999999998887654 378877777765555444444332221 1123355556555
Q ss_pred HHHHHHHHHHhhcccC-cchhhhhhhhhHHHHHHHHHH-hcCCC-----CchhhhhhHHHHHHHHHHHhhhccccc
Q 018894 233 SVSVNFSTFLVIGKTS-PVTYQVLGHLKTCLVLAFGYV-LLHDP-----FSWRNILGILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~-~~~e~-----~t~~~~~G~~lii~g~~l~~~~~~~~~ 301 (349)
=...|....-+++.+| +....+.+...-+.+...+-+ +||++ -++.+.+|++++++|..+|...|..++
T Consensus 65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~ 140 (254)
T PF07857_consen 65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK 140 (254)
T ss_pred hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence 5555666666666654 334455666666777776654 56543 457899999999999999988776653
No 67
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.67 E-value=0.00033 Score=53.91 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 74 AVMGFGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
......+++++..++...+++++|.+.+..+ ....-+.+.+.+++++||+++..+++++.++++|++.+-.
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 3445566777888999999999999997766 5799999999999999999999999999999999987754
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.62 E-value=0.00037 Score=61.76 Aligned_cols=207 Identities=12% Similarity=0.117 Sum_probs=120.0
Q ss_pred hHHHHHHH-HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccccc---
Q 018894 74 AVMGFGVL-NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQL--- 149 (349)
Q Consensus 74 ~~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~--- 149 (349)
++++.|++ .+++-.+.+.|+.+-|.+..+-+.++..+..++++..++|||++....+|..++++|-.+++...+..
T Consensus 65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i 144 (335)
T KOG2922|consen 65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI 144 (335)
T ss_pred HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence 45555654 56788999999999999999999999999999999999999999999999999999999887522111
Q ss_pred -----------c--hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHH--------H--Hhhhc
Q 018894 150 -----------N--VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFII--------G--PFLDG 206 (349)
Q Consensus 150 -----------~--~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~--------~--~~~~~ 206 (349)
+ ++.+...++-.+ .+-..+. .++++ ...++.|..+.+.+-.+-+ + ....+
T Consensus 145 ~t~~el~~~~~~~~Fliy~~~iil~~--~il~~~~---~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g 217 (335)
T KOG2922|consen 145 ESVEEVWELATEPGFLVYVIIIILIV--LILIFFY---APRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSG 217 (335)
T ss_pred ccHHHHHHHhcCccHHHHHHHHHHHH--HHHheee---ccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence 1 111111111111 1111111 11111 1222333333333221100 0 11111
Q ss_pred ccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCC--CCch----hh
Q 018894 207 LLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHD--PFSW----RN 279 (349)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e--~~t~----~~ 279 (349)
..+ .. .+..+.+++....+........+.+++..++...+.+.+ +-..++++-+.++|+| ..+. ..
T Consensus 218 ~~q------l~-~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~ 290 (335)
T KOG2922|consen 218 NNQ------LF-YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGE 290 (335)
T ss_pred Ccc------cc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 111 11 223333333333333333334567777766665555544 3466888889999987 3443 34
Q ss_pred hhhHHHHHHHHHHHh
Q 018894 280 ILGILIAVIGMVLYS 294 (349)
Q Consensus 280 ~~G~~lii~g~~l~~ 294 (349)
+.|...+++|+.+.+
T Consensus 291 ~~Gf~ti~~G~flL~ 305 (335)
T KOG2922|consen 291 LCGFVTIFLGIFLLH 305 (335)
T ss_pred HHhHHHhhheeeEee
Confidence 568888888887764
No 69
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.55 E-value=0.00077 Score=50.97 Aligned_cols=67 Identities=15% Similarity=0.074 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894 76 MGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA 142 (349)
Q Consensus 76 ~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~ 142 (349)
....+++.+..++...+++++|.+++. +-....-+.+.+.+++++||+++..++.++.+++.|++..
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 334556677888888999999999955 5556888999999999999999999999999999999864
No 70
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.55 E-value=0.0023 Score=58.49 Aligned_cols=75 Identities=28% Similarity=0.471 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
+.-+.-+++=...++....+.++++.+...++.....+++.++++++++++.++.+++|+++++.|+.+......
T Consensus 80 w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 80 WKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 333444566666799999999999999999999999999999999999999999999999999999988765443
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.49 E-value=0.00077 Score=51.21 Aligned_cols=68 Identities=19% Similarity=0.195 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 77 GFGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
..-+++++..++...+++++|.+.+..+ ....-+.+.+.+++++||+++..++.++.++++|++..-.
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3445666777888889999999997766 5688999999999999999999999999999999998754
No 72
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.47 E-value=2.8e-05 Score=66.00 Aligned_cols=203 Identities=15% Similarity=0.185 Sum_probs=135.3
Q ss_pred HHHHHHHHhhcceeccccchhHHHHHh-hhHHHHHHHHHHHHhccccchhh----hHHHHHhhhhheeeeecccc---c-
Q 018894 79 GVLNGISIGLLNLSLGFNSVGFYQMTK-LAIIPCTILLETLFFRKKFSRNI----QLSLVILLVGVGIATVTDLQ---L- 149 (349)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pi~~~~l~~~~~~e~~s~~~----~~~i~l~~~Gv~l~~~~~~~---~- 149 (349)
|++...+....+.|+++.++|.+.-+. .+.-+-+-+++++.++|-.+..+ ..++++++.|+.+.++.|.+ .
T Consensus 66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~ 145 (288)
T COG4975 66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE 145 (288)
T ss_pred hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc
Confidence 566677788889999999888876554 45667778899999999987766 46888999999999986531 1
Q ss_pred ----chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHH
Q 018894 150 ----NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFF 225 (349)
Q Consensus 150 ----~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
.-.|+...+.|.+.|-.|.+..|... .|.+....-+. .+.++..........+ ...+.. .+.
T Consensus 146 ~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqA-iGMv~~ali~~~~~~~--------~~~~K~-t~~ 211 (288)
T COG4975 146 NPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQA-IGMVIGALILGFFKME--------KRFNKY-TWL 211 (288)
T ss_pred ChHhhhhheeeeeeeccceeeeEeeecccc----ccchhhhhHHH-HHHHHHHHHHhhcccc--------cchHHH-HHH
Confidence 13689999999999999999877654 34443333222 2322222221111110 011111 233
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHHHhh
Q 018894 226 IVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVLYSY 295 (349)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l~~~ 295 (349)
-+..|++=..-|...+.+.++.+-.+.=.++.+-.+++.+-++++++|+-|..++ +|++++++|..+...
T Consensus 212 nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 212 NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 4444554444566666666666655555566677889999999999999998775 478888888776543
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.44 E-value=0.00089 Score=50.33 Aligned_cols=69 Identities=14% Similarity=0.013 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
.....++++...++...+++++|.+++. +-.....+.+.+.+++++||+++..++.++.+++.|++..-
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3444566777888888999999999955 55558899999999999999999999999999999998763
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.40 E-value=0.0011 Score=49.43 Aligned_cols=70 Identities=29% Similarity=0.233 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHhhcceeccccchhH-HHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 74 AVMGFGVLNGISIGLLNLSLGFNSVGF-YQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
.....-+++.....+...+++++|.++ +.+-...-.+.+++.+++++||+++..+++++.+++.|++..-
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 344445667778888889999999999 5566678889999999999999999999999999999998653
No 75
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.35 E-value=0.0049 Score=47.51 Aligned_cols=59 Identities=20% Similarity=0.319 Sum_probs=47.1
Q ss_pred HHHHHhhcccCc-chhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 238 FSTFLVIGKTSP-VTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 238 ~~~~~~~~~~~a-~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
+....++++.+- ..+++...+.-+.+.++++++|+|++|+.+++|++++++|++..+..
T Consensus 45 ~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 45 IFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 344455666543 34566667888999999999999999999999999999999888654
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.35 E-value=0.0088 Score=47.67 Aligned_cols=138 Identities=16% Similarity=0.130 Sum_probs=97.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHH
Q 018894 151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSC 230 (349)
Q Consensus 151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (349)
.+..++++.+.++...+.-..-++.+..+ +|.......+..|++.+.....+.++..... .-...-++...+|
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a------~~~~~pwW~~~GG 76 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA------AVASAPWWAWIGG 76 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh------hccCCchHHHHcc
Confidence 46788899999999999999999888554 7888888888888888877766644332211 1112224555666
Q ss_pred HHHHHHHHHHHHhhcccCcchhhhhhhh-hHHHHHHHHHHhcC----CCCchhhhhhHHHHHHHHHHHhh
Q 018894 231 LISVSVNFSTFLVIGKTSPVTYQVLGHL-KTCLVLAFGYVLLH----DPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~~~~~~~~~----e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
+++..+-........+.++..+..+-.. +-+.+.+++.+=+. .++++..++|++++++|+++.+.
T Consensus 77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 7777666666677788777766555444 44566666665443 58999999999999999666543
No 77
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.31 E-value=0.0036 Score=55.14 Aligned_cols=127 Identities=13% Similarity=0.009 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhh
Q 018894 9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGL 88 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (349)
.+.+...++--+.........|+.-. .|+...+-|.+...+....+......+.+++...+-+..|++...++.+
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~~~~-----~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~ 211 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKAFHV-----SGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLF 211 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCC-----ChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHH
Confidence 33444444444444445555555322 2555554444444333333333222222222223334568889999999
Q ss_pred cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhH----HHHHhhhhhe
Q 018894 89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQL----SLVILLVGVG 140 (349)
Q Consensus 89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~----~i~l~~~Gv~ 140 (349)
+..+.+....+.+..+.++.+++..+.+.+++||+-+++++. +++++++|.+
T Consensus 212 ~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 212 YLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999888654 4455555544
No 78
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.25 E-value=0.01 Score=44.94 Aligned_cols=56 Identities=20% Similarity=0.432 Sum_probs=46.4
Q ss_pred HHHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 239 STFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 239 ~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
....++|+.+ .+.+++...+..+.+.+.++++|+|++++.+++|+++++.|++..+
T Consensus 51 ~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 51 ALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3344566644 3456788888899999999999999999999999999999998864
No 79
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.23 E-value=0.0013 Score=57.76 Aligned_cols=77 Identities=26% Similarity=0.381 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 223 LFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
.......+++-...+...+.++++.+|.+..++...+.+++.++++++++.+++..||+++.+..+|+.+.......
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 45566777777788889999999999999999999999999999999999999999999999999999988765443
No 80
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.22 E-value=0.002 Score=47.47 Aligned_cols=58 Identities=21% Similarity=0.130 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhcceeccccchhHHHH-HhhhHHHHHHHHHHHHhccccchhhhHHHHHh
Q 018894 78 FGVLNGISIGLLNLSLGFNSVGFYQM-TKLAIIPCTILLETLFFRKKFSRNIQLSLVIL 135 (349)
Q Consensus 78 ~~~~~~~~~~~~~~al~~~~~s~~~~-l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~ 135 (349)
...++++..++...+++++|.+.+.. ......+.+.+.+.+++||++|..++.++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34467788889999999999999654 56799999999999999999999999999864
No 81
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.05 E-value=0.0022 Score=58.04 Aligned_cols=119 Identities=14% Similarity=0.235 Sum_probs=82.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894 150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS 229 (349)
Q Consensus 150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (349)
...|..++++++++.+....+.|+..++.+.++..-.. ...+. .....|+.....
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~------------------------~~~~~-l~~~~W~~G~~~ 59 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS------------------------GGRSY-LRRPLWWIGLLL 59 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc------------------------hhhHH-HhhHHHHHHHHH
Confidence 45799999999999999999999977643211110000 00000 001122232332
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
..++ ....+.+....++...+.++.+.-++..+++.++++|+++...+.|++++++|..+.-..
T Consensus 60 ~~~g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 60 MVLG---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred Hhcc---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 2333 344455677788888888999999999999999999999999999999999999876543
No 82
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.00 E-value=0.0054 Score=56.20 Aligned_cols=141 Identities=14% Similarity=0.091 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccc--cccccCchhHHHHHH
Q 018894 151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNV--FAFKYTPYVLFFIVL 228 (349)
Q Consensus 151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 228 (349)
..|+++.+++++|++...+-.|| .|+ -+++.. |. . +.++...+.++..+....++. .-...+...+....+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v-~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-V-GGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-H-HHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 46999999999999999988888 442 345555 44 2 222332222322111111111 111245666777777
Q ss_pred HHHHHHHHHHHHHHhhcccCcch-hhhhhhhhHHHHHHHHHHhcCCCC---c----hhhhhhHHHHHHHHHHHhhhcc
Q 018894 229 SCLISVSVNFSTFLVIGKTSPVT-YQVLGHLKTCLVLAFGYVLLHDPF---S----WRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~a~~-~s~~~~~~~v~~~~~~~~~~~e~~---t----~~~~~G~~lii~g~~l~~~~~~ 298 (349)
+|++=..-+...+..+++.+-.. ..+..-+.-+.+.+++.+++||=. + ..-++|++++++|+.+..+.-.
T Consensus 79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 88777777888888888877554 444555788899999999998632 2 3467799999999999987433
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.95 E-value=0.009 Score=45.36 Aligned_cols=57 Identities=9% Similarity=0.290 Sum_probs=46.4
Q ss_pred HHHhhcccCc-chhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 240 TFLVIGKTSP-VTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 240 ~~~~~~~~~a-~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
...++++.+- ..+++...+..+.+.+.++++|+|++++.+++|++++++|++..+..
T Consensus 47 l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3345666443 34566677788999999999999999999999999999999998654
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.94 E-value=0.0086 Score=45.03 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=47.1
Q ss_pred HHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 240 TFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 240 ~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
...++|+.+ .+.+++...+..+.+.++++++|+|++++.+++|+.++++|++..+.
T Consensus 46 Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 46 LAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 334566644 45578888899999999999999999999999999999999998764
No 85
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.85 E-value=0.00027 Score=60.95 Aligned_cols=136 Identities=15% Similarity=0.176 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
.|..+..++ ..+....+..++... .+|.++.......-.++..+.......+.. .. ...+ .++++=|+
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp----~g~R--~~LiLRg~ 105 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVI--GP----EGKR--KWLILRGF 105 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeee--cC----CCcE--EEEEeehh
Confidence 577777777 666777777777664 467766665533332222222211111110 00 0001 12233444
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
.++..-+..+++.++.+-..+.++....|+++.++++.+++|+.|....+|..+.+.|+++..+....
T Consensus 106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl 173 (346)
T KOG4510|consen 106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL 173 (346)
T ss_pred hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence 44444555666778888888889999999999999999999999999999999999999998765544
No 86
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.73 E-value=0.019 Score=49.43 Aligned_cols=125 Identities=8% Similarity=-0.042 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHH----HHHH-HH
Q 018894 11 TVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFG----VLNG-IS 85 (349)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~ 85 (349)
.+.+.+.-+.+..+..+.-|.+=+ .-+.+..+. .-+.++.++.+++-...-- +.......++.+ ++.. +-
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a-~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVA-VGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHH-HHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhcccc
Confidence 344444555555555555555543 122233333 5666666666665431111 111123333333 3332 34
Q ss_pred HhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhe
Q 018894 86 IGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVG 140 (349)
Q Consensus 86 ~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~ 140 (349)
+.+...++.+.|..++.++.++.|.+-++.++++++|++|..||+++..++.+..
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 5677889999999999999999999999999999999999999999998887765
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.66 E-value=0.016 Score=43.25 Aligned_cols=56 Identities=16% Similarity=0.282 Sum_probs=47.7
Q ss_pred HHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 241 FLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 241 ~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
-.++|+.+ .+.+++..-+-.+.+.+.++++|+|+++..+++|+.+++.|++..+..
T Consensus 48 s~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 48 SLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 34566644 345788888999999999999999999999999999999999988754
No 88
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.60 E-value=0.065 Score=46.31 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI 141 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l 141 (349)
.....++...+..+..+.+++.+.....+...+.++++.+++.++++++++..++.|..+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3334455666777888999999999999999999999999999999999999999999999998764
No 89
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.17 Score=46.00 Aligned_cols=141 Identities=12% Similarity=0.146 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc--CCCHHHHHHHhhHHHHHHHHHHHHhhhcc--cccccccccc--cCchhHHHHH
Q 018894 154 SVLSLLAVLTTCVAQIMTNTIQKKF--KVSSTQLLYQSCPYQALTLFIIGPFLDGL--LTNKNVFAFK--YTPYVLFFIV 227 (349)
Q Consensus 154 ~~~~l~s~~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~ 227 (349)
.+..++..+-.+......|...++. +..|....+..=+.-.++.+.....-+.. .......... ..+....-+.
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 3344444555556666666555432 45666666666555555555444333211 0000001111 1121233455
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
...++-.+.|-..+....+.+|.+..+...++...+.+++.++++++++..||...++...|+.+.+
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 5566666777788888999999999999999999999999999999999999999999999998887
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.22 E-value=0.0091 Score=45.29 Aligned_cols=65 Identities=23% Similarity=0.181 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894 78 FGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA 142 (349)
Q Consensus 78 ~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~ 142 (349)
.-+++..+...+++.++..+.|.+.-+ .+++-++|++.++++.+|..+++.+.|+.+++.|+.+.
T Consensus 47 pf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 47 PFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 345566677788888999999997766 58999999999999888989999999999999999875
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.90 E-value=0.32 Score=38.58 Aligned_cols=116 Identities=14% Similarity=0.031 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-ccC-CCCchhHHH-HHHHHHHHHhhcceeccccchhH
Q 018894 24 SIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EHK-PFDPRAVMG-FGVLNGISIGLLNLSLGFNSVGF 100 (349)
Q Consensus 24 ~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~~~~al~~~~~s~ 100 (349)
....+|-.+-+. ...|+.-++..+..+.+.+..+....+. +.+ ..+.+++.+ .|++......+.......++++.
T Consensus 15 ~q~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~ 92 (138)
T PF04657_consen 15 LQAAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAAL 92 (138)
T ss_pred HHHHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHH
Confidence 334455555543 2248888999999999877666543332 222 122234444 45666677778888889988888
Q ss_pred HHHHhhh-HHHHHHHHHHH----HhccccchhhhHHHHHhhhhhee
Q 018894 101 YQMTKLA-IIPCTILLETL----FFRKKFSRNIQLSLVILLVGVGI 141 (349)
Q Consensus 101 ~~~l~~~-~pi~~~~l~~~----~~~e~~s~~~~~~i~l~~~Gv~l 141 (349)
...+.-+ +-+...+++.+ .-|++++..+.+++.+.++|+.+
T Consensus 93 ~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 93 TTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 6665544 44555556664 34788999999999999999864
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.86 E-value=0.083 Score=38.85 Aligned_cols=49 Identities=20% Similarity=0.175 Sum_probs=27.2
Q ss_pred HHHHHhhcccCcchh-hhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHH
Q 018894 238 FSTFLVIGKTSPVTY-QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIA 286 (349)
Q Consensus 238 ~~~~~~~~~~~a~~~-s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~li 286 (349)
+....++|+.+...+ ++...+..+...+.+.++|||++|+.+++|++++
T Consensus 44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344456777655444 6777788999999999999999999999998875
No 93
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.99 E-value=0.22 Score=44.27 Aligned_cols=134 Identities=8% Similarity=-0.021 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH-HHccc-------cccCCCCchhHHHH
Q 018894 7 FQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVA-LWMKL-------FEHKPFDPRAVMGF 78 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~-~~~~~-------~~~~~~~~~~~~~~ 78 (349)
++......+..+..+=-..+-..+.++.+.+... +.+.+.-=+...+.-... ...+. .+..+.-+++++..
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~-~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSS-LHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccH-hHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 3455556666666666666777888887655443 333222222222222222 11221 12234446789999
Q ss_pred HHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894 79 GVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI 141 (349)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l 141 (349)
+.+...+..+.+.-++.-++-+.+++..+-=++...++.+.++.+++..||.++...++|+.+
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 999999999999999998888889999999999999999999999999999999988888764
No 94
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=94.84 E-value=0.042 Score=49.79 Aligned_cols=138 Identities=17% Similarity=0.062 Sum_probs=94.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChHHHHHHHHHHHHHHHHH-HHHHcccccc----C--CCCch--h
Q 018894 6 KFQLGTVGALSLSVISSVSIVICNKALISS--LGFTFATTLTSWHLLVTFCSLH-VALWMKLFEH----K--PFDPR--A 74 (349)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~----~--~~~~~--~ 74 (349)
+..+.+......+.+....-+++.|.++.+ ...+ +..+..+.--.+.+.+. ++........ . ..+.. .
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI 237 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH
Confidence 345555656666666666677788888853 2333 55666566666666666 5433211111 1 11122 2
Q ss_pred HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
+...+++..+.+...++.+.++++=++++.....=+++...+++++++++|..+..|..+.++|+.+...
T Consensus 238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 2233566667778888899999999999999888888999999999999999999999999999987653
No 95
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.60 E-value=0.11 Score=44.22 Aligned_cols=64 Identities=20% Similarity=0.319 Sum_probs=56.4
Q ss_pred HHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894 236 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 236 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
....++.+++..+--+.-+-...+|+...++|+.+.+..-+|....-...|++|++++.+.+.|
T Consensus 98 AMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K 161 (337)
T KOG1580|consen 98 AMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK 161 (337)
T ss_pred HHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence 4567788899988888888889999999999999999999999999999999999999875444
No 96
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.52 E-value=0.056 Score=49.26 Aligned_cols=75 Identities=13% Similarity=0.289 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 226 IVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
.+.-+.+=++.++.++.++++++....+++.....+++..++.++-+|++|+.+.++..+.+.|+++.++.+.++
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 334444444557777788888898889999999999999999999999999999999999999999998875543
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.43 E-value=0.026 Score=48.46 Aligned_cols=131 Identities=17% Similarity=0.118 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI 232 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (349)
+++++++=++.|+.--....|... +|.+...-+.+ +++++.+...+... ...+...+...+.+|++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~-GALifaiiv~~~~~---------p~~T~~~~iv~~isG~~ 68 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTL-GALIFAIIVFLFVS---------PELTLTIFIVGFISGAF 68 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccH-HHHHHHHHHheeec---------CccchhhHHHHHHhhhH
Confidence 567788888888886665554432 56665555554 44333332222211 12345556666777766
Q ss_pred HHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCCCCchhhhh----hHHHHHHHHHHHhhhc
Q 018894 233 SVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHDPFSWRNIL----GILIAVIGMVLYSYCC 297 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e~~t~~~~~----G~~lii~g~~l~~~~~ 297 (349)
=.+-+...+.+++..+..++..+++ ++-+-+.++++++|||=.+..+++ ..+++++|+.+.++.+
T Consensus 69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence 6666778888888888877776655 677888999999999977766654 5677888887776543
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.79 E-value=0.45 Score=36.15 Aligned_cols=53 Identities=23% Similarity=0.375 Sum_probs=40.7
Q ss_pred HHHhhcccCcchhh-hhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHH
Q 018894 240 TFLVIGKTSPVTYQ-VLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVL 292 (349)
Q Consensus 240 ~~~~~~~~~a~~~s-~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l 292 (349)
+++.+++.+-+.+. +.+.+.-+++++.++++.+|..+...++|+++++.|+.+
T Consensus 58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34445555544444 446888999999999888888899999999999999864
No 99
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.69 E-value=0.0067 Score=54.01 Aligned_cols=125 Identities=16% Similarity=0.251 Sum_probs=87.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHH
Q 018894 148 QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIV 227 (349)
Q Consensus 148 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (349)
..+..|.++++.+++..+...++.||..++... .+.....+..+.-.. ..||..+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------------~~~ra~~gg~~yl~~-~~Ww~G~ 71 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------------SGLRAGEGGYGYLKE-PLWWAGM 71 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------------hcccccCCCcchhhh-HHHHHHH
Confidence 345689999999999999999999888774321 000001111111111 2445555
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
+.-.++ ....|.+....+++-.+.++.+.-+...+++..+++|++++...+|++++++|.........++
T Consensus 72 ltm~vG---ei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 72 LTMIVG---EIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHH---hHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 555555 4444445667788888889999999999999999999999999999999999987776554443
No 100
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.20 E-value=4.3 Score=32.52 Aligned_cols=123 Identities=13% Similarity=0.016 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccccc-C--CCCchhHHHH-HHHHHHHHhhcceecc
Q 018894 19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEH-K--PFDPRAVMGF-GVLNGISIGLLNLSLG 94 (349)
Q Consensus 19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~~~~~~~~al~ 94 (349)
+.+....+-.|-.+-+ ....|..-.+..+..+..++..+...+..+. . ..+.++|.+. |++.............
T Consensus 14 G~~l~~Q~~iN~qL~~--~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p 91 (150)
T COG3238 14 GALLPLQAAINGRLAR--YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAP 91 (150)
T ss_pred hhhhhhHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhcc
Confidence 3333333445555554 2345889999999998887776654432222 1 1233444444 3444444445555566
Q ss_pred ccchhHHH-HHhhhHHHHHHHHHHHHh----ccccchhhhHHHHHhhhhheeee
Q 018894 95 FNSVGFYQ-MTKLAIIPCTILLETLFF----RKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 95 ~~~~s~~~-~l~~~~pi~~~~l~~~~~----~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
.+.++... .+-+..-+.-++++.+=+ +++++..++.++++.++|+.+..
T Consensus 92 ~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 92 RLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 66655544 444555666666666533 47789999999999999965543
No 101
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=90.75 E-value=0.072 Score=46.50 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=0.0
Q ss_pred ceeccccchhHHHHHhhhHHHHHHHHH-HHHhcccc-chhhhHHHHHhhhhheeeeecc--cccchhHHHHHHHHHHHHH
Q 018894 90 NLSLGFNSVGFYQMTKLAIIPCTILLE-TLFFRKKF-SRNIQLSLVILLVGVGIATVTD--LQLNVLGSVLSLLAVLTTC 165 (349)
Q Consensus 90 ~~al~~~~~s~~~~l~~~~pi~~~~l~-~~~~~e~~-s~~~~~~i~l~~~Gv~l~~~~~--~~~~~~G~~~~l~s~~~~a 165 (349)
++-++-.+-+-.+++.+...+.+.++- ..++|+|+ -..-.+|++++++-++++..-. .+.-+.|+++.+...+..-
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL 120 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLAL 120 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 344455555556666666665555543 34556665 5667778888777766654321 2334567666544433222
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHhhHH
Q 018894 166 VAQIMTNTIQKKFKVSSTQLLYQSCPY 192 (349)
Q Consensus 166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~ 192 (349)
.-..+ -.+.++++.+-|++..+...+
T Consensus 121 ~vW~Y-m~lLr~~GAs~WtiLaFcLAF 146 (381)
T PF05297_consen 121 GVWFY-MWLLRELGASFWTILAFCLAF 146 (381)
T ss_dssp ---------------------------
T ss_pred HHHHH-HHHHHHhhhHHHHHHHHHHHH
Confidence 11112 226677777888777655433
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.03 E-value=4 Score=37.26 Aligned_cols=144 Identities=10% Similarity=0.044 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHh-hhcccccccccccccCchhHHHHHHH
Q 018894 151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPF-LDGLLTNKNVFAFKYTPYVLFFIVLS 229 (349)
Q Consensus 151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (349)
..|+++-.+++++.+.+.+=.||..+ -+++......-+-+-+.+|.... ..-| +-.+.. .+.+...++...+.
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~----WsWEs~Wlv~gi~swli~P~~~a~l~ip-~~~~i~-~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG----WSWESYWLVQGIFSWLIVPWLWALLAIP-DFFSIY-SATPASTLFWTFLF 79 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC----ccHHHHHHHHHHHHHHHHHHHHHHHhCC-cHHHHH-HhCChhHHHHHHHH
Confidence 47999999999999999988777543 34444443322222222222211 1111 100111 12222333444444
Q ss_pred HHHHHHHHHHHHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcC-------CCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 230 CLISVSVNFSTFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLH-------DPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~-------e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
|++=.+-...+-..+++.+ +...++..-+..++..++--++.+ ++-....++|.+++++|+.+..+.-.++
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 4333222333334566644 344455555555555555444433 2334567889999999999987765443
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=89.72 E-value=0.19 Score=41.78 Aligned_cols=61 Identities=23% Similarity=0.362 Sum_probs=55.0
Q ss_pred HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
++.+..++++.+|+.++.+......+..+++++++++++....++..++.+.|+....+..
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 6777788999999999999999999999999999999999999999999999987766543
No 104
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=88.64 E-value=0.55 Score=41.83 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccc-----cc---cccccccCchhHHHHHHH
Q 018894 158 LLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLT-----NK---NVFAFKYTPYVLFFIVLS 229 (349)
Q Consensus 158 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~ 229 (349)
+++.+||+..-...|-.-++.+ -.+..+|-..++.+....+..+..+... .+ ..... .++..+...+.+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR--~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q-~n~~sv~~A~aG 78 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR--LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQ-ANWPSVLFAMAG 78 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC--ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhc-CChHHHHHHHHh
Confidence 4567888887777666655322 2223444444444433333222222111 01 11112 233344455666
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhh-hhhHHHHHHHHHHhcCCCCc--hhhhhhHHHHHHHHHHHhh
Q 018894 230 CLISVSVNFSTFLVIGKTSPVTYQVLG-HLKTCLVLAFGYVLLHDPFS--WRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~-~~~~v~~~~~~~~~~~e~~t--~~~~~G~~lii~g~~l~~~ 295 (349)
|++-.+.|....+++...+-..+-.+. .+.-++++.+.++ .+.+.+ ..-+.|.+++++++++-..
T Consensus 79 GvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 79 GVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred hHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHH
Confidence 666656666666666555433322221 1233344444543 344544 2445588888888877543
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=84.87 E-value=8.3 Score=33.00 Aligned_cols=126 Identities=13% Similarity=0.034 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-ccccccC-------CCCchhHHHHHHHHHHHH
Q 018894 15 LSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLFEHK-------PFDPRAVMGFGVLNGISI 86 (349)
Q Consensus 15 ~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~ 86 (349)
+..-+..+...++..|..+.--.+. .+-..++.=.++..++..+.. ...+... ......+++-|++...-.
T Consensus 160 m~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS 238 (309)
T COG5070 160 MFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS 238 (309)
T ss_pred EehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh
Confidence 3344555666666666665421222 333444555555554443322 1211111 111235555677777778
Q ss_pred hhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894 87 GLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI 141 (349)
Q Consensus 87 ~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l 141 (349)
++.-|.+.-++...+.++..++-...++.+.++++++.+...+.+++++....++
T Consensus 239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999998888887776654443
No 106
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=77.60 E-value=55 Score=29.67 Aligned_cols=136 Identities=10% Similarity=0.086 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH-HHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894 153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQL-LYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL 231 (349)
Q Consensus 153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (349)
....++.-+++...-.+..|.....++.+.... +.+++..+.+.....-..---.. .+.++ ....-..-..+
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~-----~~l~~--~~~kk~~P~~~ 85 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNF-----RPLDL--RTAKKWFPVSL 85 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeec-----CCcCh--HHHHHHccHHH
Confidence 455566666666667777777777666544433 33555555544443322110000 00111 11111111111
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
+-+...+......++.+-....++....++...+....+++-+++..-+.....+++|...+..
T Consensus 86 lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 86 LFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred HHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 1111222334558899999999999999999999999999999999999999999999877654
No 107
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=77.16 E-value=14 Score=32.85 Aligned_cols=58 Identities=24% Similarity=0.355 Sum_probs=45.8
Q ss_pred HHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 238 FSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 238 ~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
...+..+..++|+..-+..-...+++-+++.-+++.+++..||+|+..+..|+...-.
T Consensus 101 slm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 101 SLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 3334445566666666666667789999999999999999999999999999877543
No 108
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=75.25 E-value=68 Score=29.52 Aligned_cols=221 Identities=17% Similarity=0.155 Sum_probs=116.3
Q ss_pred hHHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhc-------cccchhhhHHHHHhhhhheeeee-
Q 018894 74 AVMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFR-------KKFSRNIQLSLVILLVGVGIATV- 144 (349)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~-------e~~s~~~~~~i~l~~~Gv~l~~~- 144 (349)
.....+++-+++...+-.++.|+..+..+ +...+.-.+-.++-.++.+ ++-....++++++.++|+.+...
T Consensus 75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 33445677777777777888898877743 3333443443333333332 33345678999999999998764
Q ss_pred ---cc-------cccc-hhHHHHHHHHHHHHHHHHHHHHHHH--h----hcCCCHHHHHH----HhhHHHHHHHHHHHHh
Q 018894 145 ---TD-------LQLN-VLGSVLSLLAVLTTCVAQIMTNTIQ--K----KFKVSSTQLLY----QSCPYQALTLFIIGPF 203 (349)
Q Consensus 145 ---~~-------~~~~-~~G~~~~l~s~~~~a~~~v~~k~~~--~----~~~~~~~~~~~----~~~~~~~i~l~~~~~~ 203 (349)
.| .++| ..|++.++++.+..|..+.-.+.-. + ..+.+|..... ....-+.+..+.....
T Consensus 155 G~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~ 234 (344)
T PF06379_consen 155 GSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLI 234 (344)
T ss_pred HHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHH
Confidence 11 1233 3699999999999988777654321 1 12333332211 1111222333333222
Q ss_pred hhccccc---ccccccccC--chhHHHHHHHHHHHHHHHHHHHHhhcccC----cchhhhhhhhhHHHHHHHHHHhcCC-
Q 018894 204 LDGLLTN---KNVFAFKYT--PYVLFFIVLSCLISVSVNFSTFLVIGKTS----PVTYQVLGHLKTCLVLAFGYVLLHD- 273 (349)
Q Consensus 204 ~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----a~~~s~~~~~~~v~~~~~~~~~~~e- 273 (349)
...-... ...+....+ .....+..+.+++=+.....+-+.-.+.+ .....+.+.+..+++-+.+.+ ++|
T Consensus 235 ~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEW 313 (344)
T PF06379_consen 235 LLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEW 313 (344)
T ss_pred HHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHh
Confidence 2110000 001110111 12333344444444333333333334444 456666777777777777775 555
Q ss_pred -----CCchhhhhhHHHHHHHHHHHhh
Q 018894 274 -----PFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 274 -----~~t~~~~~G~~lii~g~~l~~~ 295 (349)
+.-..-++|++++++++.+.-+
T Consensus 314 Kg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 314 KGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred ccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 3334557788888888776543
No 109
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=72.02 E-value=5.5 Score=26.85 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=18.1
Q ss_pred hhhhhHHHHHHHHHHHhhhcccc
Q 018894 278 RNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 278 ~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
.-+++++++++|.++|....+++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 34678999999999998776543
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=71.03 E-value=18 Score=26.95 Aligned_cols=31 Identities=16% Similarity=0.447 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCCCchhhhhhHHHHHHHHHH
Q 018894 262 LVLAFGYVLLHDPFSWRNILGILIAVIGMVL 292 (349)
Q Consensus 262 ~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l 292 (349)
+-..++++.++|++++..+.|.++++.++..
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 3356778899999999999999888877643
No 111
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=70.08 E-value=4 Score=30.30 Aligned_cols=70 Identities=14% Similarity=0.193 Sum_probs=51.1
Q ss_pred hhHHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 73 RAVMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
+++++. ++.-.+..++++-+++.+.+.+. +-.+++-.|+++.+..+..|...++.+.|..+.+.|+.+..
T Consensus 54 ~Y~iPF-llNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 54 EYLIPF-LLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHH-HHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 333333 34445556777778888777744 45567788899999887777788999999999999987653
No 112
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.40 E-value=6.2 Score=34.87 Aligned_cols=55 Identities=24% Similarity=0.250 Sum_probs=46.6
Q ss_pred HHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894 239 STFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY 293 (349)
Q Consensus 239 ~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~ 293 (349)
..+.++++.+....-+-..+..++++++++.+++++-+..-..++.+|++|..+-
T Consensus 118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG 172 (347)
T KOG1442|consen 118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG 172 (347)
T ss_pred ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec
Confidence 3456788888888888888899999999999999999999999999998886543
No 113
>PRK02237 hypothetical protein; Provisional
Probab=65.65 E-value=52 Score=24.71 Aligned_cols=45 Identities=20% Similarity=0.294 Sum_probs=38.3
Q ss_pred hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
.+...-+-.+.+.+..+.+=+++++...++|..++++|+.+..+.
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 456666777888899999999999999999999999999877544
No 114
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=62.80 E-value=1.3 Score=38.54 Aligned_cols=59 Identities=20% Similarity=0.371 Sum_probs=51.2
Q ss_pred HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894 237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295 (349)
Q Consensus 237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~ 295 (349)
|+....+.++++-+....+..-..++..+++|++++.+-.+.++.|.+++++|+.....
T Consensus 92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 55556677888888888899999999999999999999999999999999999876543
No 115
>PRK02237 hypothetical protein; Provisional
Probab=59.41 E-value=74 Score=23.93 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894 108 IIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 108 ~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~ 144 (349)
..+...+..+.+.|+|+++..++|..++++|+.++.+
T Consensus 69 yI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 69 YVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 3444556788889999999999999999999987654
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.15 E-value=42 Score=25.13 Aligned_cols=45 Identities=16% Similarity=0.333 Sum_probs=38.6
Q ss_pred hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
.+...-+-.+.+.+.++.+=+++|+...++|..++++|+.+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456666778889999999999999999999999999999887654
No 117
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=58.62 E-value=1.3e+02 Score=28.81 Aligned_cols=15 Identities=20% Similarity=0.226 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHHHHh
Q 018894 280 ILGILIAVIGMVLYS 294 (349)
Q Consensus 280 ~~G~~lii~g~~l~~ 294 (349)
.++.+++++.+..|.
T Consensus 179 ~~a~~v~l~~i~~~~ 193 (437)
T TIGR00939 179 GTPCVVQLICIVCYL 193 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345555555555554
No 118
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=58.30 E-value=57 Score=28.72 Aligned_cols=42 Identities=12% Similarity=-0.011 Sum_probs=29.4
Q ss_pred hhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHH
Q 018894 243 VIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGIL 284 (349)
Q Consensus 243 ~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~ 284 (349)
+.++.+++.....+.++-.+.++...+++.-......-.+++
T Consensus 115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~i 156 (249)
T PF10225_consen 115 CYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAAI 156 (249)
T ss_pred hcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 456788888888888888888888888776555544444443
No 119
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=57.34 E-value=41 Score=33.21 Aligned_cols=20 Identities=5% Similarity=0.027 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHhhhccccc
Q 018894 282 GILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 282 G~~lii~g~~l~~~~~~~~~ 301 (349)
+++++++..+.+++...++.
T Consensus 535 Acl~~l~~~~~iq~~l~~~~ 554 (618)
T KOG3762|consen 535 ACLVTLALFISIQLLLKRRG 554 (618)
T ss_pred HHHHHHHHHHHhhhhhcccc
Confidence 44444555556665444433
No 120
>PRK02463 OxaA-like protein precursor; Provisional
Probab=57.32 E-value=80 Score=28.76 Aligned_cols=39 Identities=8% Similarity=0.213 Sum_probs=20.8
Q ss_pred hhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 255 LGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 255 ~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
..++.|++.++++.. +.--+...-+++.++.++=.++.+
T Consensus 210 m~~~~Pim~~~~~~~-~PagL~lYW~~snlfsi~Q~~i~~ 248 (307)
T PRK02463 210 MMYMMPIMMVVFSFS-SPAGVGLYWLVGGFFSIIQQLITT 248 (307)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666555543 223455555666555555555544
No 121
>PHA03049 IMV membrane protein; Provisional
Probab=54.17 E-value=16 Score=24.52 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=17.5
Q ss_pred hhhhhHHHHHHHHHHHhhhcccc
Q 018894 278 RNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 278 ~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
..+++++++++|.++|...+++.
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~ 27 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKT 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 34678889999999998765543
No 122
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.48 E-value=94 Score=23.32 Aligned_cols=39 Identities=26% Similarity=0.199 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec
Q 018894 107 AIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT 145 (349)
Q Consensus 107 ~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~ 145 (349)
...+...+..+.+.|+|+++..++|..++++|+.++.+.
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 334555667888899999999999999999999987653
No 123
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=53.43 E-value=1.1e+02 Score=24.01 Aligned_cols=35 Identities=17% Similarity=0.364 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894 259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 259 ~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~ 294 (349)
|-++-+++|.+.+++ -....++|..+.+.|++..-
T Consensus 70 RGlfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 70 RGLFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666 33445557777777765544
No 124
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.74 E-value=1e+02 Score=22.68 Aligned_cols=49 Identities=14% Similarity=0.433 Sum_probs=33.6
Q ss_pred cccCcchh--hhhhhhhHHHH----HHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894 245 GKTSPVTY--QVLGHLKTCLV----LAFGYVLLHDPFSWRNILGILIAVIGMVLY 293 (349)
Q Consensus 245 ~~~~a~~~--s~~~~~~~v~~----~~~~~~~~~e~~t~~~~~G~~lii~g~~l~ 293 (349)
.|+|.... +-+..++.+++ +.++.+.++|++.+..+.|..++..|+...
T Consensus 59 NRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 59 NRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred chhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 44444333 33445555544 456788899999999999988888887654
No 125
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=49.14 E-value=1.9e+02 Score=25.56 Aligned_cols=101 Identities=13% Similarity=-0.124 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHH-H-
Q 018894 41 ATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLET-L- 118 (349)
Q Consensus 41 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~-~- 118 (349)
++.+-+.......+..++....+..+ .-...-+..|.+.+.++.+..-.++.+..+....+-++.-+++--..- +
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~~~~p---~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfG 103 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLILGFP---PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFG 103 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCC---cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhce
Confidence 55555555555444444443332221 112333344677778888888899999999999999887666665433 2
Q ss_pred Hhc---ccc--chhhhHHHHHhhhhheeeee
Q 018894 119 FFR---KKF--SRNIQLSLVILLVGVGIATV 144 (349)
Q Consensus 119 ~~~---e~~--s~~~~~~i~l~~~Gv~l~~~ 144 (349)
+++ |.+ ....++|++++++|..+...
T Consensus 104 lFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 104 LFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred eccccccccchhHHHHHHHHHHHHHHHheee
Confidence 343 323 45678899999999887653
No 126
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=48.68 E-value=2.4e+02 Score=27.33 Aligned_cols=23 Identities=4% Similarity=0.024 Sum_probs=19.1
Q ss_pred CchhhhhhHHHHHHHHHHHhhhc
Q 018894 275 FSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 275 ~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
++..|++.+.++++|++++.+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999987775543
No 127
>PRK15432 autoinducer 2 ABC transporter permease LsrC; Provisional
Probab=48.61 E-value=65 Score=29.86 Aligned_cols=24 Identities=13% Similarity=0.173 Sum_probs=15.7
Q ss_pred chhhhhhHHHHHHHHHHHhhhccc
Q 018894 276 SWRNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 276 t~~~~~G~~lii~g~~l~~~~~~~ 299 (349)
.+.+++..+++++.+.+....+++
T Consensus 287 ~~~~ii~g~lll~vl~~~~~~~~~ 310 (344)
T PRK15432 287 WWNDFIAGLVLLGVLVFDGRLRCA 310 (344)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHh
Confidence 466777777777777766654444
No 128
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=46.80 E-value=1.2e+02 Score=22.69 Aligned_cols=53 Identities=8% Similarity=0.126 Sum_probs=34.1
Q ss_pred ceeccccchhHHHHHh-hhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894 90 NLSLGFNSVGFYQMTK-LAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA 142 (349)
Q Consensus 90 ~~al~~~~~s~~~~l~-~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~ 142 (349)
-++.+..+.+---+++ ..+-...+.++.+++||++++....|.+.+++++.++
T Consensus 53 RiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 53 RIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444444443333333 2233344557788999999999999999888877654
No 129
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=44.50 E-value=3e+02 Score=26.48 Aligned_cols=25 Identities=16% Similarity=0.558 Sum_probs=17.7
Q ss_pred CCCchhhhhhHHHHHHHHHHHhhhc
Q 018894 273 DPFSWRNILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 273 e~~t~~~~~G~~lii~g~~l~~~~~ 297 (349)
..-++..++|.++.++.+...+.+.
T Consensus 281 ~~~~~~~iig~i~~~~~v~yss~ra 305 (429)
T PF03348_consen 281 SWNTWQSIIGLIFTFVSVLYSSFRA 305 (429)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccc
Confidence 4567778899888888876655443
No 130
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=44.07 E-value=30 Score=24.18 Aligned_cols=11 Identities=27% Similarity=0.546 Sum_probs=4.7
Q ss_pred hhhHHHHHHHH
Q 018894 280 ILGILIAVIGM 290 (349)
Q Consensus 280 ~~G~~lii~g~ 290 (349)
++|+.++++..
T Consensus 9 i~Gm~iVF~~L 19 (79)
T PF04277_consen 9 IIGMGIVFLVL 19 (79)
T ss_pred HHHHHHHHHHH
Confidence 34444444433
No 131
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=43.60 E-value=1.4e+02 Score=27.54 Aligned_cols=12 Identities=8% Similarity=-0.070 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHh
Q 018894 109 IPCTILLETLFF 120 (349)
Q Consensus 109 pi~~~~l~~~~~ 120 (349)
|++....++.+.
T Consensus 61 pl~~~~~g~~L~ 72 (340)
T PF12794_consen 61 PLLLLAIGYLLQ 72 (340)
T ss_pred HHHHHHHHHHHH
Confidence 444444444433
No 132
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=43.51 E-value=37 Score=27.69 Aligned_cols=8 Identities=38% Similarity=0.547 Sum_probs=4.7
Q ss_pred CCCCCccc
Q 018894 317 KEGETDPL 324 (349)
Q Consensus 317 ~~~~~~~~ 324 (349)
.+.|..|+
T Consensus 137 ~~~Em~pL 144 (163)
T PF06679_consen 137 ENVEMAPL 144 (163)
T ss_pred ccceeccc
Confidence 34566677
No 133
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=41.23 E-value=23 Score=34.17 Aligned_cols=30 Identities=27% Similarity=0.320 Sum_probs=24.6
Q ss_pred chhhhhhHHHHHHHHHHHhhhccccccccc
Q 018894 276 SWRNILGILIAVIGMVLYSYCCSLESQQKA 305 (349)
Q Consensus 276 t~~~~~G~~lii~g~~l~~~~~~~~~~~~~ 305 (349)
=|+-.+|++++.....+|.+.++++.++.+
T Consensus 223 vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 223 VWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 377888999999999999888887776655
No 134
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=40.76 E-value=75 Score=24.59 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=31.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 018894 6 KFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSW 47 (349)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~ 47 (349)
|..+.+..+++++++.++...++-|.+...+. +||++++-+
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~-NY~fFL~Ql 93 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMK-NYPFFLNQL 93 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHh
Confidence 34577888999999999999999999988643 556666544
No 135
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=40.59 E-value=1.2e+02 Score=27.51 Aligned_cols=71 Identities=15% Similarity=0.298 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
..++.+..=--.+++..+++.-.-+++...-.+++..+++.++-=|+++|.-..-..++-+|+.++++...
T Consensus 89 Ptalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 89 PTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred hhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 33444433223567778888888888888889999999999988899999888888888888887776543
No 136
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=40.58 E-value=1.5e+02 Score=22.09 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec
Q 018894 109 IPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT 145 (349)
Q Consensus 109 pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~ 145 (349)
.+...+..++..|.++++..+.|..++++|+.++...
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 4444556777889999999999999999999887764
No 137
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=37.33 E-value=4.2e+02 Score=26.12 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=18.3
Q ss_pred HHHHHhhcccCcchhhhhhhhhHHHHHHHHHH
Q 018894 238 FSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYV 269 (349)
Q Consensus 238 ~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~ 269 (349)
...+-.-+..+.-..+++..++..++.++..+
T Consensus 373 ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQti 404 (511)
T TIGR00806 373 IATFQIASSLSKELCALVFGINTFVATALKTI 404 (511)
T ss_pred HHHHHHHHHhcccceEEEEecHHHHHHHHHHh
Confidence 33333445566556666666666666666543
No 138
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=37.29 E-value=2e+02 Score=25.78 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=48.1
Q ss_pred HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300 (349)
Q Consensus 241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~ 300 (349)
...+.+.+--+--++...+-+...+.++++-|.+-.+..++...+..+|.++++....+.
T Consensus 124 n~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~ 183 (367)
T KOG1582|consen 124 NGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT 183 (367)
T ss_pred cCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc
Confidence 333455555556677888888899999999999999999999999999999999876543
No 139
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=37.16 E-value=34 Score=26.31 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=12.2
Q ss_pred CCCCchhhhh----hHHHHHHHHHHHhh
Q 018894 272 HDPFSWRNIL----GILIAVIGMVLYSY 295 (349)
Q Consensus 272 ~e~~t~~~~~----G~~lii~g~~l~~~ 295 (349)
-|..|.+++. ..++.++|+++-.+
T Consensus 29 ~ED~tpWNysiL~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 29 VEDATPWNYSILALSFVVLVISFFLLGR 56 (125)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 4555554432 44455566655543
No 140
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.13 E-value=28 Score=26.85 Aligned_cols=7 Identities=14% Similarity=0.183 Sum_probs=2.8
Q ss_pred HHHhhhc
Q 018894 291 VLYSYCC 297 (349)
Q Consensus 291 ~l~~~~~ 297 (349)
+.|..+|
T Consensus 84 i~y~irR 90 (122)
T PF01102_consen 84 ISYCIRR 90 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344433
No 141
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=36.11 E-value=2.9e+02 Score=26.41 Aligned_cols=12 Identities=17% Similarity=-0.097 Sum_probs=4.9
Q ss_pred hhhHHHHHHHHH
Q 018894 280 ILGILIAVIGMV 291 (349)
Q Consensus 280 ~~G~~lii~g~~ 291 (349)
+++.++.+++.+
T Consensus 404 ~~~~~~~li~~~ 415 (455)
T TIGR00892 404 YASGSIVVSAGL 415 (455)
T ss_pred HHhhHHHHHHHH
Confidence 343344444443
No 142
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=35.42 E-value=2.7e+02 Score=23.45 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=17.4
Q ss_pred HHHHHHhcCCCCchhhhhhHHHHH--HHHHHHh
Q 018894 264 LAFGYVLLHDPFSWRNILGILIAV--IGMVLYS 294 (349)
Q Consensus 264 ~~~~~~~~~e~~t~~~~~G~~lii--~g~~l~~ 294 (349)
-.+|..++++-.=+-++.|..+.+ +|.+...
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334666666666666777765544 4444443
No 143
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=34.63 E-value=5.6e+02 Score=26.79 Aligned_cols=43 Identities=14% Similarity=0.003 Sum_probs=31.4
Q ss_pred HHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894 100 FYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA 142 (349)
Q Consensus 100 ~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~ 142 (349)
-+.++..+.|+-.+.++.....+|.+...+.+.+..++|.+-+
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 3567788899999999988877776555566666667776644
No 144
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=34.13 E-value=1.3e+02 Score=27.04 Aligned_cols=43 Identities=12% Similarity=0.208 Sum_probs=33.9
Q ss_pred HHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894 101 YQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT 143 (349)
Q Consensus 101 ~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~ 143 (349)
.++...+-=++..+++.+.++.+++.+.|+|..+.++|.++..
T Consensus 271 VTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 271 VTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred EEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444455567778888888999999999999999999888754
No 145
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.88 E-value=1.9e+02 Score=21.29 Aligned_cols=31 Identities=10% Similarity=0.276 Sum_probs=26.3
Q ss_pred HHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894 112 TILLETLFFRKKFSRNIQLSLVILLVGVGIA 142 (349)
Q Consensus 112 ~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~ 142 (349)
.+.++.+.+||++++..+.+.+++.+|+.++
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3457888999999999999999998888654
No 146
>PF15102 TMEM154: TMEM154 protein family
Probab=33.45 E-value=53 Score=26.13 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHhhhccccc
Q 018894 281 LGILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 281 ~G~~lii~g~~l~~~~~~~~~ 301 (349)
++.++++..++++.+.|+++.
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHHHheeEEeeccc
Confidence 344445555666655555443
No 147
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=33.37 E-value=1.2e+02 Score=19.59 Aligned_cols=44 Identities=11% Similarity=0.186 Sum_probs=33.6
Q ss_pred hhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018894 128 IQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQK 176 (349)
Q Consensus 128 ~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~ 176 (349)
..+|..+.++|+++...++. |....+++....|......||..+
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 46788888899998887653 566677777778888888888765
No 148
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=32.71 E-value=5e+02 Score=25.66 Aligned_cols=21 Identities=14% Similarity=0.081 Sum_probs=10.8
Q ss_pred cchhhhhhhhhHHHHHHHHHH
Q 018894 249 PVTYQVLGHLKTCLVLAFGYV 269 (349)
Q Consensus 249 a~~~s~~~~~~~v~~~~~~~~ 269 (349)
+....+.....|+-+.+.|.+
T Consensus 346 si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 346 SIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333344444456666666654
No 149
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=32.03 E-value=4.7e+02 Score=25.19 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=16.4
Q ss_pred hhhhhHHHHHHHHHHHhhhccc
Q 018894 278 RNILGILIAVIGMVLYSYCCSL 299 (349)
Q Consensus 278 ~~~~G~~lii~g~~l~~~~~~~ 299 (349)
....|.++..+|..+|.+.+++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4556888889999888875543
No 150
>PRK04570 cell division protein ZipA; Provisional
Probab=30.96 E-value=1.1e+02 Score=26.38 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=9.0
Q ss_pred HHHHHHHHHHhhhccc
Q 018894 284 LIAVIGMVLYSYCCSL 299 (349)
Q Consensus 284 ~lii~g~~l~~~~~~~ 299 (349)
.+.+.++.++...|.+
T Consensus 16 ~~~~~~~~~~~~~~~~ 31 (243)
T PRK04570 16 LLLVAAIFLFGRPKKS 31 (243)
T ss_pred HHHHHHHHHhcCCCCC
Confidence 4555666666655443
No 151
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=30.37 E-value=4.9e+02 Score=24.81 Aligned_cols=204 Identities=9% Similarity=-0.084 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccccchhh---------hHHHHHhhhhheeeeecccccc----------------hhHHHHHHHHHHHHH
Q 018894 111 CTILLETLFFRKKFSRNI---------QLSLVILLVGVGIATVTDLQLN----------------VLGSVLSLLAVLTTC 165 (349)
Q Consensus 111 ~~~~l~~~~~~e~~s~~~---------~~~i~l~~~Gv~l~~~~~~~~~----------------~~G~~~~l~s~~~~a 165 (349)
+..+...+++++|..+.. --.+.+.++|..++-.+-..+| ..-.+-..+++..-+
T Consensus 175 ~~aL~~a~~LgpR~gr~~~~~~~~~~~~~n~~~~~lG~~iLw~gW~gFN~gs~l~~~~~~~~~~~~~a~~NT~la~a~g~ 254 (404)
T TIGR03644 175 AAALAGVLLLGPRKGKYGKNGEVNPIPGSNLPLATLGTFILWMGWFGFNGGSQLALSDVADANAVARIFANTNAAAAGGA 254 (404)
T ss_pred HHHHHHHheeccCCCCCccCCCcCCCCCCCHHHHHHHHHHHHHHHHhhcchhhhhcccccchHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 018894 166 VAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIG 245 (349)
Q Consensus 166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
+......+..+ +........--.+.|.+...+.....+ ++....+...++++........-+ .|
T Consensus 255 l~~~~~~~~~~--gk~~~~~~~nG~LAGLVaITa~~~~v~-------------p~~A~iiG~iag~v~~~~~~~~~~-~~ 318 (404)
T TIGR03644 255 IAALLLTKLLF--GKADLTMVLNGALAGLVAITAEPLTPS-------------PLAATLIGAVGGVIVVFSIVLLDK-LK 318 (404)
T ss_pred HHHHHHHHHHc--CCCCHHHHHHHHHhhhhhhccccCCCC-------------HHHHHHHHHHHHHHHHHHHHHHHh-CC
Q ss_pred ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccccccccccccCCCCcCCCCCCCcccc
Q 018894 246 KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETDPLI 325 (349)
Q Consensus 246 ~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (349)
.-+|..+-.+-..--+++.+..-++-++..-..|++|++.++.=....+..-.+--++....+-++ +||+..-..
T Consensus 319 iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~g~~~~~~~~~~~s~~~~~il~~~~~lRv~~-----e~E~~GlD~ 393 (404)
T TIGR03644 319 IDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLIGAATIFAWVFVTSLIVWFILKATMGIRVSE-----EEEYEGLDI 393 (404)
T ss_pred CCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCH-----HHHHcCCCH
Q ss_pred ccccCCCCCc
Q 018894 326 NAEKGTGDGV 335 (349)
Q Consensus 326 ~~~~~~~~~~ 335 (349)
.+..++.-++
T Consensus 394 ~~hg~~ay~e 403 (404)
T TIGR03644 394 AECGMEAYPE 403 (404)
T ss_pred HHhCcccCCC
No 152
>PF03631 Virul_fac_BrkB: Virulence factor BrkB; InterPro: IPR017039 This entry represents the uncharacterised protein family UPF0761. It includes the E. coli gene product of yihY, and was previously thought to be a family of tRNA-processing ribonuclease BN proteins []. This has been shown to be incorrect [].; GO: 0004540 ribonuclease activity
Probab=30.02 E-value=3.7e+02 Score=23.37 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHH--HHHHccccccCCCCchhHHHHHHHHHHH
Q 018894 43 TLTSWHLLVTFCSLH--VALWMKLFEHKPFDPRAVMGFGVLNGIS 85 (349)
Q Consensus 43 ~~~~~r~~~~~l~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (349)
.....|..+..++.. .....+..+.++.++|..++.+++..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~~~p~~~~~~~~~~~Ga~~~~~~ 204 (260)
T PF03631_consen 160 LWNLIRWLVSFLLLFLLFFLLYRFLPNRRVRWRAALPGALFAAVL 204 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHH
Confidence 456677765554433 2233455566677788888776655543
No 153
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=29.65 E-value=57 Score=23.34 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=20.8
Q ss_pred CCchhhhhhHHHHHHHHHHHhhhcc
Q 018894 274 PFSWRNILGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 274 ~~t~~~~~G~~lii~g~~l~~~~~~ 298 (349)
.+++..++|+.+++.|..+|..+..
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~ 28 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFF 28 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999976443
No 154
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=28.70 E-value=2e+02 Score=21.47 Aligned_cols=45 Identities=18% Similarity=0.246 Sum_probs=35.5
Q ss_pred hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296 (349)
Q Consensus 252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~ 296 (349)
.+..+-+-.+.+.+..+.+=+..++...++|..++++|+.+....
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 444555666777888888878999999999999999998766554
No 155
>PRK14778 lipoprotein signal peptidase; Provisional
Probab=28.12 E-value=82 Score=26.34 Aligned_cols=10 Identities=10% Similarity=-0.097 Sum_probs=4.2
Q ss_pred cccccccCCC
Q 018894 335 VAKAPAWNSN 344 (349)
Q Consensus 335 ~~~~~~~~~~ 344 (349)
++.+++||.+
T Consensus 172 ~~~~~~~~~~ 181 (186)
T PRK14778 172 SKSDKRGQSE 181 (186)
T ss_pred cccccCCCCC
Confidence 3334444443
No 156
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=27.50 E-value=3.1e+02 Score=21.82 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018894 151 VLGSVLSLLAVLTTCVAQIMTNTIQK 176 (349)
Q Consensus 151 ~~G~~~~l~s~~~~a~~~v~~k~~~~ 176 (349)
..+.+..+++++.|.-|....||..+
T Consensus 120 i~~l~~~li~a~IwipYf~~S~RVK~ 145 (149)
T PF10754_consen 120 IRELLRSLIAAAIWIPYFLRSKRVKN 145 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 46888899999999999999999765
No 157
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=27.13 E-value=92 Score=24.79 Aligned_cols=28 Identities=21% Similarity=0.182 Sum_probs=18.0
Q ss_pred hcccCcchhhhhhhhhHHHHHHHHHHhc
Q 018894 244 IGKTSPVTYQVLGHLKTCLVLAFGYVLL 271 (349)
Q Consensus 244 ~~~~~a~~~s~~~~~~~v~~~~~~~~~~ 271 (349)
+..-+....+.+.|+-|.+..+++.+++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666777777777777666653
No 158
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=26.94 E-value=1e+02 Score=26.83 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=14.9
Q ss_pred CCchhhhhhHHHHHHHHHHHh
Q 018894 274 PFSWRNILGILIAVIGMVLYS 294 (349)
Q Consensus 274 ~~t~~~~~G~~lii~g~~l~~ 294 (349)
..+...|++-+++++|.++.-
T Consensus 218 y~n~q~wLwwi~~vlG~ll~l 238 (262)
T KOG4812|consen 218 YFNGQYWLWWIFLVLGLLLFL 238 (262)
T ss_pred ccccchHHHHHHHHHHHHHHH
Confidence 345567888888888887743
No 159
>TIGR01943 rnfA electron transport complex, RnfABCDGE type, A subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit.
Probab=24.59 E-value=4.2e+02 Score=22.23 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=15.7
Q ss_pred cccchHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 018894 3 EGQKFQLGTVGALS-LSVISSVSIVICNKALIS 34 (349)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~K~v~~ 34 (349)
++.++.+.+-.++. ....++.....+.+++..
T Consensus 32 ~~~~~a~gmGlav~~V~~~s~~~~~~i~~~il~ 64 (190)
T TIGR01943 32 KKLETAIGMGLAVTFVMTLASVISWLVYNFILD 64 (190)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444444444444 344444455556666665
No 160
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=24.28 E-value=1.1e+02 Score=28.00 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=11.1
Q ss_pred CCCCCccccccccCCCCCcccccccC
Q 018894 317 KEGETDPLINAEKGTGDGVAKAPAWN 342 (349)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (349)
.|+.++|. +++.-+.+.+.++..|+
T Consensus 43 ~D~v~~~~-s~~p~kkk~hqr~~~~k 67 (420)
T KOG2096|consen 43 MDEVTETI-SEEPVKKKKHQRNDQWK 67 (420)
T ss_pred CCcccCcc-ccCCcchhcccchhhhc
Confidence 44555555 33333333344455554
No 161
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.85 E-value=1.9e+02 Score=21.75 Aligned_cols=9 Identities=11% Similarity=0.364 Sum_probs=4.3
Q ss_pred HHHHHHHHH
Q 018894 261 CLVLAFGYV 269 (349)
Q Consensus 261 v~~~~~~~~ 269 (349)
++.+.++|+
T Consensus 57 lVGa~iG~l 65 (116)
T COG5336 57 LVGAGIGWL 65 (116)
T ss_pred HHHHHHHHH
Confidence 344555554
No 162
>PF14283 DUF4366: Domain of unknown function (DUF4366)
Probab=23.78 E-value=71 Score=27.49 Aligned_cols=12 Identities=33% Similarity=0.276 Sum_probs=4.7
Q ss_pred HHHHHHhhhccc
Q 018894 288 IGMVLYSYCCSL 299 (349)
Q Consensus 288 ~g~~l~~~~~~~ 299 (349)
+|...|.+.|.+
T Consensus 172 ~gGGa~yYfK~~ 183 (218)
T PF14283_consen 172 IGGGAYYYFKFY 183 (218)
T ss_pred hhcceEEEEEEe
Confidence 333344344443
No 163
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=23.59 E-value=1.6e+02 Score=22.20 Aligned_cols=15 Identities=0% Similarity=-0.115 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHH
Q 018894 10 GTVGALSLSVISSVS 24 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~ 24 (349)
.-+....++.+.++.
T Consensus 5 ~Fi~~~~~~~~~Wi~ 19 (108)
T PF06210_consen 5 TFIIIFTVFLAVWIL 19 (108)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444444444443
No 164
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=23.44 E-value=5.2e+02 Score=22.86 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHc-cc--cccCCCCchhHHHHHHHHHHH
Q 018894 40 FATTLTSWHLLVTFCSLHVALWM-KL--FEHKPFDPRAVMGFGVLNGIS 85 (349)
Q Consensus 40 ~p~~~~~~r~~~~~l~l~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 85 (349)
.|..+. +-+++..++++..-+. ++ ++.++.++++-+..|++.++.
T Consensus 110 ~~~~v~-~~Li~~g~lL~~~~~~~~~~~~~~~~~~~~dal~iGl~Q~lA 157 (259)
T PF02673_consen 110 SPLVVA-IALIITGLLLWLADRLKRKGRKDEEDITFKDALIIGLAQGLA 157 (259)
T ss_pred chHHHH-HHHHHHHHHHHHHHHHccCCCCCcccCCHHHHHHHHHHHHcc
Confidence 466655 4455555555444333 32 344566778888888877764
No 165
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=22.37 E-value=2.4e+02 Score=18.54 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=20.0
Q ss_pred HHHHHhhhhheeeeecccccchhHHHHHHHH
Q 018894 130 LSLVILLVGVGIATVTDLQLNVLGSVLSLLA 160 (349)
Q Consensus 130 ~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s 160 (349)
.|++....|+.+...++........+++..-
T Consensus 2 ~Gil~iv~Gi~~l~~p~~~~~~~~~i~g~~~ 32 (72)
T PF03729_consen 2 SGILFIVLGILLLFNPDASLAALAIILGIWL 32 (72)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4677788888888877766555444444333
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=22.32 E-value=7e+02 Score=23.93 Aligned_cols=19 Identities=5% Similarity=-0.054 Sum_probs=8.4
Q ss_pred hhhhHHHHHHHHHHHhhhc
Q 018894 279 NILGILIAVIGMVLYSYCC 297 (349)
Q Consensus 279 ~~~G~~lii~g~~l~~~~~ 297 (349)
.++..++.++|.+..-..+
T Consensus 415 f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 415 ISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 3333344455555554443
No 167
>PF11446 DUF2897: Protein of unknown function (DUF2897); InterPro: IPR021550 This is a bacterial family of uncharacterised proteins.
Probab=21.71 E-value=91 Score=20.32 Aligned_cols=18 Identities=17% Similarity=0.360 Sum_probs=10.7
Q ss_pred hhHHHHHHHHHHHhhhcc
Q 018894 281 LGILIAVIGMVLYSYCCS 298 (349)
Q Consensus 281 ~G~~lii~g~~l~~~~~~ 298 (349)
.-++++++|+++-|..-.
T Consensus 6 wlIIviVlgvIigNia~L 23 (55)
T PF11446_consen 6 WLIIVIVLGVIIGNIAAL 23 (55)
T ss_pred hHHHHHHHHHHHhHHHHH
Confidence 345666677776665433
No 168
>PF10192 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane domain; InterPro: IPR019336 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). This region of 270 amino acids is the seven transmembrane alpha-helical domains included within five GPCRRHODOPSN4 motifs of a G-protein-coupled-receptor (GPCR) protein, conserved from nematodes to humans [].
Probab=20.95 E-value=5.1e+02 Score=22.67 Aligned_cols=55 Identities=11% Similarity=0.034 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHhh------cCCChHHHHHHHHHHHHHHHHHHHHH
Q 018894 7 FQLGTVGALSLSVISSVSIVIC-NKALISS------LGFTFATTLTSWHLLVTFCSLHVALW 61 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~K~v~~~------~~~~~p~~~~~~r~~~~~l~l~~~~~ 61 (349)
+.......+.++.+....+.+. ++...+. ++-.....+..+|...+..++.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~~~~~~~y~s~pGy~li~lri~~~~~F~~~~~~ 195 (257)
T PF10192_consen 134 NSVKLIVFIILYVVLQVILFIWENRFYFDPHSYLYFYDSWPGYILIALRIVLAIWFIYGLYQ 195 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCcccceeecccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666777788888777 4444443 12222566777888887776665544
No 169
>PRK10655 potE putrescine transporter; Provisional
Probab=20.90 E-value=3.4e+02 Score=25.81 Aligned_cols=24 Identities=17% Similarity=0.355 Sum_probs=16.8
Q ss_pred hhhhhHHHHHHHHHHHhhhccccc
Q 018894 278 RNILGILIAVIGMVLYSYCCSLES 301 (349)
Q Consensus 278 ~~~~G~~lii~g~~l~~~~~~~~~ 301 (349)
....|..++++|..+|-..++|.+
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~~ 432 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRFE 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 345688889999999876554433
No 170
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=20.67 E-value=1.4e+02 Score=21.93 Aligned_cols=6 Identities=33% Similarity=0.562 Sum_probs=2.5
Q ss_pred hHHHHH
Q 018894 282 GILIAV 287 (349)
Q Consensus 282 G~~lii 287 (349)
|+++.+
T Consensus 52 Gi~lMl 57 (96)
T PF07214_consen 52 GIGLML 57 (96)
T ss_pred HHHHHH
Confidence 444444
No 171
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=20.49 E-value=85 Score=24.50 Aligned_cols=24 Identities=33% Similarity=0.153 Sum_probs=13.7
Q ss_pred CcchhhhhhhhhHHHHHHHHHHhc
Q 018894 248 SPVTYQVLGHLKTCLVLAFGYVLL 271 (349)
Q Consensus 248 ~a~~~s~~~~~~~v~~~~~~~~~~ 271 (349)
+....+.+.|+-|++.++.+.++.
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l~ 89 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVLG 89 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566666666666665543
No 172
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=20.40 E-value=3.4e+02 Score=20.40 Aligned_cols=41 Identities=24% Similarity=0.305 Sum_probs=30.3
Q ss_pred hhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894 253 QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY 293 (349)
Q Consensus 253 s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~ 293 (349)
-+.+.+.-.++.+.+..+-.|...-..++|..+++.|+.+.
T Consensus 83 pv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 83 PVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred eecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 34455667788888886555566677888999999998764
Done!