BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018896
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFF4|ILVH1_ARATH Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis
thaliana GN=VAT1 PE=1 SV=1
Length = 477
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/317 (68%), Positives = 254/317 (80%), Gaps = 5/317 (1%)
Query: 31 PSQGRTSFSSSAEVSSKKLQLVTA-SGSTSNNALPVSQSVPPITASKVKRHTISVFVGDE 89
P++ S + + +K++ T S ++++ A+ +QSV P +V+RHTISVFVGDE
Sbjct: 27 PAKTPNSLQVNQIIDGRKMRNATVLSAASTDKAITTAQSVAPTACDRVRRHTISVFVGDE 86
Query: 90 SGIINRIAGVFARRGYNIESLAVGLNVDKALFTIVVSGTERVLRQVVEQLNKLVNVIKVE 149
SGIINRIAGVFARRGYNIESLAVGLN DKALFTIVV GT++VL+QVVEQLNKLVNVIKVE
Sbjct: 87 SGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIKVE 146
Query: 150 DISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAV 209
D+S EPHVERELMLIKLN D ST EIMWLVDIFRAK+VD SE +LTIEVTGDPGKMVA+
Sbjct: 147 DLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTIEVTGDPGKMVAL 206
Query: 210 QRNLSKFGIKELARTGKIALRREKLGDTAPFWNFSAASYPDLEEKKRTGIFIPETNQSLN 269
NL KFGIKE+ARTGKIALRREK+G+TAPFW FSAASYP L ++ +T +L
Sbjct: 207 TTNLEKFGIKEIARTGKIALRREKMGETAPFWRFSAASYPHLVKESSHETVAEKTKLALT 266
Query: 270 GNANVDTSSRGDVYPVEPYDDFSANQVLDAHWGILYDEDPSGLRSHTLSMLVNNTPGVLN 329
GN N SS GDVYPVEPY+DF VLDAHWG++YDED SGLRSHTLS+LV N PGVLN
Sbjct: 267 GNGNA--SSGGDVYPVEPYNDFKP--VLDAHWGMVYDEDSSGLRSHTLSLLVANVPGVLN 322
Query: 330 IVTGVISRRGYNIQVIS 346
++TG ISRRGYNIQ ++
Sbjct: 323 LITGAISRRGYNIQSLA 339
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 74 ASKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERV 131
+S ++ HT+S+ V + G++N I G +RRGYNI+SLAVG + L T V+ GT+
Sbjct: 302 SSGLRSHTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDEN 361
Query: 132 LRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDIS 191
+ ++V QL KL+++ ++++I++ P ERELMLIK+ DTS +++ + +FRAK +D+S
Sbjct: 362 IDKLVRQLQKLIDLQEIQNITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVS 421
Query: 192 EHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKLGDTAPFWNFS 244
+H +T+EVTGD KM A+Q L +GI E+ARTG++AL RE D+ +S
Sbjct: 422 DHTITLEVTGDLRKMSALQTQLEAYGICEVARTGRVALVRESGVDSTYLRGYS 474
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 312 LRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVISNNL 349
+R HT+S+ V + G++N + GV +RRGYNI+ ++ L
Sbjct: 74 VRRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGL 111
>sp|Q93YZ7|ILVH2_ARATH Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis
thaliana GN=At2g31810 PE=1 SV=1
Length = 491
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/299 (67%), Positives = 238/299 (79%), Gaps = 20/299 (6%)
Query: 56 GSTSNNALPVSQSVPPITASKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN 115
G S+ + + S P SKV++HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN
Sbjct: 65 GKISDASFSEASSATP--KSKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLN 122
Query: 116 VDKALFTIVVSGTERVLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPE 175
DKALFTIVV GTERVL+QV+EQL KLVNV+KVEDIS+EP VERELML+K+N + E
Sbjct: 123 RDKALFTIVVCGTERVLQQVIEQLQKLVNVLKVEDISSEPQVERELMLVKVNAHPESRAE 182
Query: 176 IMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKLG 235
IMWLVD FRA+VVDI+EHALTIEVTGDPGKM+AV+RNL KF I+E+ RTGKIALRREK+G
Sbjct: 183 IMWLVDTFRARVVDIAEHALTIEVTGDPGKMIAVERNLKKFQIREIVRTGKIALRREKMG 242
Query: 236 DTAPFWNFSAASYPDLEEK--------KRTGIFIPETNQSLNGNANVDTSSRGDVYPVEP 287
TAPFW FSAASYPDL+E+ + G +P+ +TS+ GDVYPVEP
Sbjct: 243 ATAPFWRFSAASYPDLKEQAPVSVLRSSKKGAIVPQK----------ETSAGGDVYPVEP 292
Query: 288 YDDFSANQVLDAHWGILYDEDPSGLRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
+ D +++LDAHWG+L DED SGLRSHTLS+LVN+ PGVLNIVTGV +RRGYNIQ ++
Sbjct: 293 FFDPKVHRILDAHWGLLTDEDTSGLRSHTLSLLVNDIPGVLNIVTGVFARRGYNIQSLA 351
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Query: 75 SKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVL 132
S ++ HT+S+ V D G++N + GVFARRGYNI+SLAVG K + T V+ T+ +
Sbjct: 315 SGLRSHTLSLLVNDIPGVLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESV 374
Query: 133 RQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISE 192
++V+QL KLV+V +V D+++ P ERELMLIK+ + + +++ + IFRAK VD+S+
Sbjct: 375 SKLVQQLYKLVDVHEVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSD 434
Query: 193 HALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKLGDTAPFWNFS 244
H +T+++TGD KMVA+QR L +GI E+ARTG++AL RE D+ +S
Sbjct: 435 HTITLQLTGDLDKMVALQRLLEPYGICEVARTGRVALARESGVDSKYLRGYS 486
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 310 SGLRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVISNNL 349
S +R HT+S+ V + G++N + GV +RRGYNI+ ++ L
Sbjct: 82 SKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGL 121
>sp|Q9SMC2|ILVH_NICPL Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 449
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/255 (73%), Positives = 215/255 (84%), Gaps = 2/255 (0%)
Query: 92 IINRIAGVFARRGYNIESLAVGLNVDKALFTIVVSGTERVLRQVVEQLNKLVNVIKVEDI 151
+INRIAGVFARRGYNIESLAVGLN DKALFTIVVSGTERVL+QV+EQL KLVNVIKVED+
Sbjct: 37 MINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTERVLQQVMEQLQKLVNVIKVEDL 96
Query: 152 SNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQR 211
S EP VERELMLIK++ D E+MWLVD+FRAK+VDIS+ +LTIEVTGDPGKMVAVQR
Sbjct: 97 SKEPQVERELMLIKISADPKYRAEVMWLVDVFRAKIVDISDQSLTIEVTGDPGKMVAVQR 156
Query: 212 NLSKFGIKELARTGKIALRREKLGDTAPFWNFSAASYPDLEEKKRTGIFIPETNQSLNGN 271
NLSKFGI+E+ARTGKIALRREK+G++APFW FSAASYPDLE G ++ NG
Sbjct: 157 NLSKFGIREIARTGKIALRREKMGESAPFWRFSAASYPDLEGAMSAGTISRTIKRTPNGE 216
Query: 272 ANVDTSSRGDVYPVEPYDDFSANQVLDAHWGILYDEDPSGLRSHTLSMLVNNTPGVLNIV 331
+ + + GDVYPVE D+ +QVLDAHWG+L DED SGLRSHTLSMLVN+TPGVLNIV
Sbjct: 217 SM--SMAEGDVYPVETDDNSGVSQVLDAHWGVLNDEDTSGLRSHTLSMLVNDTPGVLNIV 274
Query: 332 TGVISRRGYNIQVIS 346
TGV +RRGYNIQ ++
Sbjct: 275 TGVFARRGYNIQSLA 289
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 106/152 (69%), Gaps = 2/152 (1%)
Query: 75 SKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVL 132
S ++ HT+S+ V D G++N + GVFARRGYNI+SLAVG + L T VV GT+ +
Sbjct: 253 SGLRSHTLSMLVNDTPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRITTVVPGTDESV 312
Query: 133 RQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISE 192
++V+QL KLV++ +V DI++ P ERELMLIK+ + + ++ + IFRAK VD+S+
Sbjct: 313 SKLVQQLYKLVDIHEVRDITHLPFAERELMLIKIAVNAAARRNVLDIASIFRAKAVDVSD 372
Query: 193 HALTIEVTGDPGKMVAVQRNLSKFGIKELART 224
H +T+E+TGD KMV +QR L +GI E+ART
Sbjct: 373 HTITLELTGDLHKMVRLQRLLEPYGICEVART 404
>sp|Q55141|ILVH_SYNY3 Acetolactate synthase small subunit OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ilvH PE=3 SV=2
Length = 172
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 120/156 (76%), Gaps = 2/156 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVV 136
+HT+SV V DE+G++ RIAG+FARRG+NIESLAVG D + T+VV G E + Q+
Sbjct: 2 KHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGSAEQGDVSRITMVVPGDENTIEQLT 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL KLVNVIKV+DI+ P VERELML+K++ + E++ L +FRA++VDISE +T
Sbjct: 62 KQLYKLVNVIKVQDITETPCVERELMLVKVSANAPNRAEVIELAQVFRARIVDISEDTVT 121
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 232
IEV GDPGKMVA+ + L+KFGIKE+ARTGKIAL RE
Sbjct: 122 IEVVGDPGKMVAILQMLAKFGIKEVARTGKIALVRE 157
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
HTLS+LV + GVL + G+ +RRG+NI+
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIE 31
>sp|Q9TLY1|ILVH_CYACA Acetolactate synthase small subunit OS=Cyanidium caldarium GN=ilvH
PE=3 SV=1
Length = 172
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 123/155 (79%), Gaps = 2/155 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
++T+SV V DE+G++ RIAG+FARRG+NIESLAVG K + T+VV G +R + Q+
Sbjct: 2 KYTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQKGISRITMVVPGDDRTVEQLT 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL KLVN++KV++I+ P VEREL+L+K+N TS+ PEI+ ++ +FRAKVVD+SE+ L
Sbjct: 62 KQLYKLVNILKVDNITEIPCVERELILVKINASTSSRPEILSILQVFRAKVVDLSENLLV 121
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
+E+TGDPGK+ A+Q+ L KFGI E+ARTGKIAL R
Sbjct: 122 LELTGDPGKVAAIQQLLQKFGIIEIARTGKIALTR 156
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
+TLS+LV + GVL + G+ +RRG+NI+
Sbjct: 3 YTLSVLVEDEAGVLTRIAGLFARRGFNIE 31
>sp|O78451|ILVH_GUITH Acetolactate synthase small subunit OS=Guillardia theta GN=ilvH
PE=3 SV=1
Length = 169
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 120/158 (75%), Gaps = 6/158 (3%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVG----LNVDKALFTIVVSGTERVLRQ 134
+HT+SV V DESG++ RIAG+FARRG+NIESLAVG L + + T+VV ER + Q
Sbjct: 2 KHTLSVLVEDESGVLTRIAGLFARRGFNIESLAVGPTEKLGISR--ITMVVPSDERTIEQ 59
Query: 135 VVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHA 194
+ +QL KLVN++KVEDI+N P VERELMLIKL T E + +++IFRAKVVD+SE
Sbjct: 60 LTKQLYKLVNILKVEDITNLPTVERELMLIKLRVSTFERTEALDIINIFRAKVVDLSEDF 119
Query: 195 LTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 232
L IEVTGDPGK+VA+++ LSKF I E+ RTGKI+L RE
Sbjct: 120 LIIEVTGDPGKIVAIEQILSKFTISEIVRTGKISLVRE 157
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
HTLS+LV + GVL + G+ +RRG+NI+
Sbjct: 3 HTLSVLVEDESGVLTRIAGLFARRGFNIE 31
>sp|Q1XDQ7|ILVH_PORYE Acetolactate synthase small subunit OS=Porphyra yezoensis GN=ilvH
PE=3 SV=1
Length = 174
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 119/155 (76%), Gaps = 2/155 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVV 136
+HT+SV V DE+G+++RI+G+FARRG+NI SLAVG + + T+VV G R + Q+
Sbjct: 2 KHTLSVLVQDEAGVLSRISGLFARRGFNIASLAVGPAEQIGVSRITMVVQGDNRTIEQLT 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL KLVN++ V+D++N P VERELMLIK+ ++ T E + +V IFRAK+VDI+E L
Sbjct: 62 KQLYKLVNILNVQDVTNIPSVERELMLIKIQINSQTRTEALEIVRIFRAKIVDIAEDLLI 121
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
IEVTGDPGK+VA+++ L+KFGI E+ARTGKI L R
Sbjct: 122 IEVTGDPGKIVAIEQLLTKFGIIEIARTGKILLVR 156
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNI 342
HTLS+LV + GVL+ ++G+ +RRG+NI
Sbjct: 3 HTLSVLVQDEAGVLSRISGLFARRGFNI 30
>sp|Q9MS98|ILVH_GALSU Acetolactate synthase small subunit OS=Galdieria sulphuraria
GN=ilvH PE=3 SV=1
Length = 181
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 120/157 (76%), Gaps = 4/157 (2%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKA---LFTIVVSGTERVLRQV 135
+HT+SV V DESG++ RI+G+FARRG+NI+SLAVG +KA T+V+ G R++ Q+
Sbjct: 2 KHTLSVLVEDESGVLTRISGLFARRGFNIDSLAVG-PAEKAGISRITMVIRGDNRIIEQI 60
Query: 136 VEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHAL 195
+ L KLVNV+K++DI+N P VERELMLIK+ + EI+ + +IFRA+VVD+SE +
Sbjct: 61 TKHLYKLVNVLKIQDITNIPCVERELMLIKVKTGENKRNEILEIANIFRARVVDLSESFI 120
Query: 196 TIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 232
+E+TGDPGK+ A+++ L K+GI E+ARTGKIAL RE
Sbjct: 121 ILEITGDPGKIAAIEKLLEKYGICEIARTGKIALTRE 157
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 314 SHTLSMLVNNTPGVLNIVTGVISRRGYNI 342
HTLS+LV + GVL ++G+ +RRG+NI
Sbjct: 2 KHTLSVLVEDESGVLTRISGLFARRGFNI 30
>sp|P51230|ILVH_PORPU Acetolactate synthase small subunit OS=Porphyra purpurea GN=ilvH
PE=3 SV=1
Length = 174
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 123/172 (71%), Gaps = 8/172 (4%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVV 136
+HT+SV V DE+G+++RI+G+FARRG+NI SLAVG + + T+VV G R + Q+
Sbjct: 2 KHTLSVLVQDEAGVLSRISGLFARRGFNIASLAVGPAEQIGVSRITMVVQGDNRTIEQLT 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL KLVN++ V+D++N P VERELMLIK+ ++ E + +V IFRA VVDI+E +
Sbjct: 62 KQLYKLVNILNVQDVTNIPSVERELMLIKIQVNSQNRIEALEIVKIFRANVVDIAEDLII 121
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR------EKLGDTAPFWN 242
+EVTGDPGK+VA+++ L+KFGI E+ARTGKI+L R E L D +N
Sbjct: 122 VEVTGDPGKIVAIEQLLTKFGIIEIARTGKISLVRTSKINTEYLKDKVVAYN 173
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNI 342
HTLS+LV + GVL+ ++G+ +RRG+NI
Sbjct: 3 HTLSVLVQDEAGVLSRISGLFARRGFNI 30
>sp|P65161|ILVH_MYCTU Putative acetolactate synthase small subunit OS=Mycobacterium
tuberculosis GN=ilvH PE=1 SV=1
Length = 168
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
Query: 78 KRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN--VDKALFTIVVSGTERVLRQV 135
K HT+SV V D+ G++ R+A +F+RRG+NIESLAVG D++ TIVVS + L Q+
Sbjct: 4 KTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQI 63
Query: 136 VEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHAL 195
+QLNKL+NVIK+ + +E V REL LIK+ D + +++ V++FRA V+D+S +L
Sbjct: 64 TKQLNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESL 123
Query: 196 TIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
T+E TG+ GK+ A+ R L FGI+E+A++G ++L R
Sbjct: 124 TVEATGNRGKLEALLRVLEPFGIREIAQSGMVSLSR 159
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 313 RSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
++HTLS+LV + PGVL V + SRRG+NI+ ++
Sbjct: 4 KTHTLSVLVEDKPGVLARVAALFSRRGFNIESLA 37
>sp|P65162|ILVH_MYCBO Acetolactate synthase small subunit OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=ilvH PE=3 SV=1
Length = 168
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
Query: 78 KRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN--VDKALFTIVVSGTERVLRQV 135
K HT+SV V D+ G++ R+A +F+RRG+NIESLAVG D++ TIVVS + L Q+
Sbjct: 4 KTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQI 63
Query: 136 VEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHAL 195
+QLNKL+NVIK+ + +E V REL LIK+ D + +++ V++FRA V+D+S +L
Sbjct: 64 TKQLNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESL 123
Query: 196 TIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
T+E TG+ GK+ A+ R L FGI+E+A++G ++L R
Sbjct: 124 TVEATGNRGKLEALLRVLEPFGIREIAQSGMVSLSR 159
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 313 RSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
++HTLS+LV + PGVL V + SRRG+NI+ ++
Sbjct: 4 KTHTLSVLVEDKPGVLARVAALFSRRGFNIESLA 37
>sp|O67703|ILVH_AQUAE Acetolactate synthase small subunit OS=Aquifex aeolicus (strain
VF5) GN=ilvH PE=3 SV=1
Length = 192
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 72 ITASKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTE 129
I +V++H I+V V +E G++ RIA + A +GYNIE L+VG +K + TI V G +
Sbjct: 20 IRKGQVRKHIITVKVRNEMGVLARIATLIAGKGYNIEGLSVGETHEKGISRMTIEVIGDD 79
Query: 130 RVLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTS-TWPEIMWLVDIFRAKVV 188
V+ QVV+QL +L++ +KV D+++ PHVEREL LIK+ +S E++ + +IFR KVV
Sbjct: 80 IVIEQVVKQLRRLIDTLKVSDLTDVPHVERELALIKVYTPSSRARDEVLRITEIFRGKVV 139
Query: 189 DISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 232
D+S TIEVTGD K+ A+ L FGIKE+ARTGK+A+RRE
Sbjct: 140 DVSPDTYTIEVTGDEDKINAMIELLKPFGIKEMARTGKVAMRRE 183
>sp|O28555|ILVH_ARCFU Probable acetolactate synthase small subunit OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=ilvH PE=3 SV=1
Length = 159
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNV--DKALFTIVVSGTERVLRQVV 136
+HTI+V V ++ G++ R+AG+F RRG+NIESL VG D + TIVV G ++V+ QV+
Sbjct: 2 KHTIAVLVENKPGVLARVAGLFRRRGFNIESLTVGTTERDDLSRMTIVVEGDDKVVEQVI 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QLNKL+ IKV +I+ E VEREL LI+++ EI+ L +IFRA++VD+S +
Sbjct: 62 KQLNKLIETIKVSEIT-ESSVERELCLIRVHAPPEKRGEIVELTNIFRARIVDVSRDSFI 120
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
IEVTGD K+ A + ++GIKELARTGK+A+ R
Sbjct: 121 IEVTGDEDKVSAFIDLMRQYGIKELARTGKVAMVR 155
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 314 SHTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
HT+++LV N PGVL V G+ RRG+NI+
Sbjct: 2 KHTIAVLVENKPGVLARVAGLFRRRGFNIE 31
>sp|A0QUX7|ILVH_MYCS2 Acetolactate synthase small subunit OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=ilvH PE=1 SV=1
Length = 170
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 108/154 (70%), Gaps = 2/154 (1%)
Query: 80 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVVE 137
HT+SV V D+ G++ R++ +F+RRG+NI+SLAVG K + TIVVS + L Q+ +
Sbjct: 8 HTLSVLVEDKPGVLARVSSLFSRRGFNIQSLAVGATEQKDMSRMTIVVSVEDSPLEQITK 67
Query: 138 QLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTI 197
QLNKL+NVIK+ + + V REL LIK+ D +T +I+ V++FRAKVVD+S +LTI
Sbjct: 68 QLNKLINVIKIVEQEEDNSVSRELALIKVRADATTRGQIIEAVNLFRAKVVDVSTESLTI 127
Query: 198 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
E TG P K+ A+ R L +GI+E+A++G +++ R
Sbjct: 128 EATGTPEKLEALLRVLEPYGIREIAQSGVVSVSR 161
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 311 GLRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
G +HTLS+LV + PGVL V+ + SRRG+NIQ
Sbjct: 4 GTPTHTLSVLVEDKPGVLARVSSLFSRRGFNIQ 36
>sp|O33113|ILVH_MYCLE Acetolactate synthase small subunit OS=Mycobacterium leprae (strain
TN) GN=ilvH PE=3 SV=1
Length = 169
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 80 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVVE 137
HT+SV V D G++ R+A +F+RRG+NIESLAVG K + TIVVS E L QV +
Sbjct: 7 HTLSVLVEDTPGVLARVAALFSRRGFNIESLAVGATECKTMSRMTIVVSAEETPLEQVTK 66
Query: 138 QLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTI 197
QL+KL+NVIKV + + + REL LIK+ + T +++ V +FRA+V+D+S +LT+
Sbjct: 67 QLHKLINVIKVVEQEADNSLSRELALIKVRAEAGTRSQVIEAVHLFRARVIDVSLESLTV 126
Query: 198 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
E TGD K+ A+ R L FG++E+ ++G ++L R
Sbjct: 127 EATGDCSKIEALLRVLEPFGVREIVQSGVVSLSR 160
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 311 GLRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQ 343
GL +HTLS+LV +TPGVL V + SRRG+NI+
Sbjct: 3 GLPTHTLSVLVEDTPGVLARVAALFSRRGFNIE 35
>sp|O27492|ILVH_METTH Probable acetolactate synthase small subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=ilvH PE=3 SV=1
Length = 168
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 3/155 (1%)
Query: 80 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDK--ALFTIVVSGTERVLRQVVE 137
H IS V + G++ R+AG+F RRG+NIE++ VG + A TI+ G +RVL Q+ +
Sbjct: 9 HIISALVEHKPGVLQRVAGLFTRRGFNIENITVGESETPGIARMTIIARGDDRVLEQITK 68
Query: 138 QLNKLVNVIKVEDISNEPHVERELMLIKLNGDT-STWPEIMWLVDIFRAKVVDISEHALT 196
QLNKL++VIKV D+ V+REL ++K++ + S EI+ +IFR ++VD+S ALT
Sbjct: 69 QLNKLIDVIKVRDLEPAATVKRELCMVKVHAPSESERSEIIQYTNIFRGRIVDVSPDALT 128
Query: 197 IEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
+EVTGD K+ A L FGIKELARTG A+ R
Sbjct: 129 VEVTGDSEKIDAFLELLRNFGIKELARTGPTAMSR 163
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 314 SHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
+H +S LV + PGVL V G+ +RRG+NI+ I+
Sbjct: 8 THIISALVEHKPGVLQRVAGLFTRRGFNIENIT 40
>sp|Q59499|ILVH_MYCAV Acetolactate synthase small subunit OS=Mycobacterium avium GN=ilvH
PE=3 SV=1
Length = 167
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Query: 80 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVVE 137
HT+SV V + G++ R+A +F+RRG+NIESLAVG K + TIVVS E L Q+ +
Sbjct: 6 HTLSVLVEAKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITK 65
Query: 138 QLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTI 197
QLNKL+NVIK+ ++ + V REL LIK+ D T +++ V++FRAKV+D+S ALTI
Sbjct: 66 QLNKLINVIKIVELEDGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTI 125
Query: 198 EVTGDPGKMVAVQRNL 213
E TGD GK+ A+ R L
Sbjct: 126 EATGDRGKIEALLRVL 141
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 313 RSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
++HTLS+LV PGVL V + SRRG+NI+ ++
Sbjct: 4 QTHTLSVLVEAKPGVLARVAALFSRRGFNIESLA 37
>sp|Q57625|ILVH_METJA Probable acetolactate synthase small subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=ilvH PE=3 SV=1
Length = 172
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGL--NVDKALFTIVVSGTERVLRQVV 136
RH IS V ++ G++ RI+G+F RRG+NI S+ VG+ N + TIVV+G +++L QV+
Sbjct: 8 RHVISALVLNKPGVLQRISGLFTRRGFNISSITVGITENPQISRVTIVVNGDDKILEQVI 67
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDT-STWPEIMWLVDIFRAKVVDISEHAL 195
+QLNKL++VIKV ++ + V+REL LIK+ T S +++ IFR VVD+S +L
Sbjct: 68 KQLNKLIDVIKVSELEEKKSVQRELCLIKIYAPTESAKSQVIQYTSIFRGNVVDLSPESL 127
Query: 196 TIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
+E+TG K+ A + GIKE+ARTG AL R
Sbjct: 128 IVEITGSEDKINAFIDLVKPLGIKEMARTGITALAR 163
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 315 HTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
H +S LV N PGVL ++G+ +RRG+NI I+
Sbjct: 9 HVISALVLNKPGVLQRISGLFTRRGFNISSIT 40
>sp|P37252|ILVH_BACSU Acetolactate synthase small subunit OS=Bacillus subtilis (strain
168) GN=ilvH PE=3 SV=3
Length = 172
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVG----LNVDKALFTIVVSGTERVLRQ 134
+ I++ V + SG++NRI G+F +R YNIES+ VG V + F + V G E + Q
Sbjct: 2 KRIITLTVVNRSGVLNRITGLFTKRHYNIESITVGHTETAGVSRITFVVHVEG-ENDVEQ 60
Query: 135 VVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHA 194
+ +QLNK ++V+KV DI+N+ V+REL LIK+ ST EI +++ FRA VVD+S +
Sbjct: 61 LTKQLNKQIDVLKVTDITNQSIVQRELALIKVVSAPSTRTEINGIIEPFRASVVDVSRDS 120
Query: 195 LTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 231
+ ++VTG+ K+ A+ L +GIKE+ARTG A R
Sbjct: 121 IVVQVTGESNKIEALIELLKPYGIKEIARTGTTAFAR 157
>sp|P00894|ILVH_ECOLI Acetolactate synthase isozyme 3 small subunit OS=Escherichia coli
(strain K12) GN=ilvH PE=1 SV=3
Length = 163
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
R +SV + +ESG ++R+ G+F++RGYNIESL V D L TI G E+VL Q+
Sbjct: 2 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIE 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL+KLV+V++V ++ HVERE+ML+K+ E+ +IFR +++D++ T
Sbjct: 62 KQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYT 121
Query: 197 IEVTGDPGKM---VAVQRNLSKFGIKELARTGKIALRR 231
+++ G GK+ +A R+++K I E+AR+G + L R
Sbjct: 122 VQLAGTSGKLDAFLASIRDVAK--IVEVARSGVVGLSR 157
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 317 LSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
LS+L+ N G L+ V G+ S+RGYNI+ ++
Sbjct: 5 LSVLLENESGALSRVIGLFSQRGYNIESLT 34
>sp|P21622|ILVH_SALTY Acetolactate synthase isozyme 3 small subunit OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=ilvH PE=3 SV=2
Length = 163
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
R +SV + +ESG ++R+ G+F++RGYNIESL V D L TI G E+VL Q+
Sbjct: 2 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIE 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL+KLV+V++V ++ HVERE+ML+K+ E+ +IFR +++D++ T
Sbjct: 62 KQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGREEVKRNTEIFRGQIIDVTPTLYT 121
Query: 197 IEVTGDPGKM---VAVQRNLSKFGIKELARTGKIALRR 231
+++ G K+ +A R+++K I E+AR+G + L R
Sbjct: 122 VQLAGTSDKLDAFLASLRDVAK--IVEVARSGVVGLSR 157
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 317 LSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
LS+L+ N G L+ V G+ S+RGYNI+ ++
Sbjct: 5 LSVLLENESGALSRVIGLFSQRGYNIESLT 34
>sp|P45260|ILVH_HAEIN Acetolactate synthase small subunit OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ilvH PE=3
SV=1
Length = 163
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
R +SV + +ESG ++R+ G+F++R +NIESL V D L TI G + L Q+
Sbjct: 2 RRILSVLLENESGALSRVVGLFSQRAFNIESLTVAPTDDPTLSRMTIEAVGDAQALEQIE 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL+KLV+V KV ++S + H+ERE++L K+ S+ EI L DIFR ++VD++ + T
Sbjct: 62 KQLHKLVDVFKVVNLSEQEHIEREIVLAKVRAVGSSRDEIKRLADIFRGQIVDVTPKSYT 121
Query: 197 IEVTGDPGKMVAVQRNL-SKFGIKELARTGKIALRR 231
I+++G K+ A L + + E+ R+G I++ R
Sbjct: 122 IQLSGTNDKVDAFISALKEETTLLEIVRSGLISVSR 157
>sp|Q02140|ILVH_LACLA Acetolactate synthase small subunit OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=ilvH PE=3 SV=2
Length = 158
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 5/146 (3%)
Query: 90 SGIINRIAGVFARRGYNIESLAVGLNVDKAL----FTIVVSGTERVLRQVVEQLNKLVNV 145
+GI+NR V RR NI S+ G+ + L F I V + V Q+++QLN+L++V
Sbjct: 13 TGIMNRFTAVLNRRQVNILSITAGVTESQDLTHTTFVIEVDHLDEV-EQIIKQLNRLIDV 71
Query: 146 IKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTIEVTGDPGK 205
I+V DI++ PHVERE++LIK++ + EI +++ FR VVD++ +TI++TGD K
Sbjct: 72 IEVADITDLPHVEREVVLIKVSAPPTIRAEIFTMIEPFRVNVVDVNLENVTIQLTGDSAK 131
Query: 206 MVAVQRNLSKFGIKELARTGKIALRR 231
+ A+ +S +GI +ARTG R
Sbjct: 132 IEALIDVVSPYGILNMARTGSAGFER 157
>sp|O85294|ILVH_BUCAP Acetolactate synthase small subunit OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=ilvH PE=3 SV=1
Length = 158
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
R +SV + +ESG ++R+ G+F++RGYNIE++ V D +L TI G E+ + Q+
Sbjct: 2 RRILSVLLENESGALSRVIGLFSQRGYNIETITVAPTEDPSLSKMTIQTIGNEKSIEQIE 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL+KL++V++V + H+ERE+ML+K+ + ++ + ++FR ++VDI+
Sbjct: 62 KQLHKLIDVLRVIKVGQNSHIEREIMLLKVQTNNCKKDDVKHITEVFRGQIVDITSTTYV 121
Query: 197 IEVTGDPGKM---VAVQRNLSKFGIKELARTGKIALRR 231
+++TG K+ + + RN ++ I E+ R+G + + R
Sbjct: 122 LQITGTAKKLDSFLKIIRNTTE--IIEMTRSGIVGIAR 157
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 317 LSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
LS+L+ N G L+ V G+ S+RGYNI+ I+
Sbjct: 5 LSVLLENESGALSRVIGLFSQRGYNIETIT 34
>sp|P57320|ILVH_BUCAI Acetolactate synthase small subunit OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=ilvH PE=3 SV=1
Length = 158
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 79 RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQVV 136
R +S+ + +ESG ++R+ G+F++RGYNIE++ + D L TI G E+ + Q+
Sbjct: 2 RRILSILLENESGALSRVIGLFSQRGYNIETITLAPTEDPTLSKMTIQTVGNEKAIEQIE 61
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALT 196
+QL+KL++V++V I H+ERE++L+K+ + +I + ++FR ++VDI+
Sbjct: 62 KQLHKLIDVLRVVQIGQSSHIEREIVLLKVQINNHRRDDIKHITEVFRGQIVDITSATYI 121
Query: 197 IEVTGDPGKMVAVQRNLSKFG-IKELARTGKIALRR 231
++++G K+ A + + F I E+ R+G + + R
Sbjct: 122 LQLSGTTKKIDAFLKIIRNFSEIIEVTRSGIVGISR 157
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 317 LSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
LS+L+ N G L+ V G+ S+RGYNI+ I+
Sbjct: 5 LSILLENESGALSRVIGLFSQRGYNIETIT 34
>sp|Q89AP8|ILVH_BUCBP Acetolactate synthase small subunit OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=ilvH PE=3 SV=1
Length = 159
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Query: 77 VKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQ 134
+K +S+ + +ESG ++R+ G+F++RGYNIES+ V D ++ TI G ++V+ Q
Sbjct: 1 MKHRILSILLENESGALSRVVGLFSQRGYNIESITVAPTEDLSISKITIQTFGDKKVIEQ 60
Query: 135 VVEQLNKLVNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHA 194
+ +QL+KL++V+KV +I +E H +RE+MLIK+N + ++ + + FR ++ + +
Sbjct: 61 IGKQLHKLIDVLKVTEIEDEEHFKREIMLIKINNTYDQYRKVQDITNAFRGYIISATSNI 120
Query: 195 LTIEVTGDPGKM---VAVQRNLSKFGIKELARTGKIALRR 231
I+++G + + + + L+ I E++R+G I++ +
Sbjct: 121 SIIQLSGTNKNLDTYIEIMKKLT--NIIEISRSGIISIYK 158
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 312 LRSHTLSMLVNNTPGVLNIVTGVISRRGYNIQVIS 346
++ LS+L+ N G L+ V G+ S+RGYNI+ I+
Sbjct: 1 MKHRILSILLENESGALSRVVGLFSQRGYNIESIT 35
>sp|P25605|ILV6_YEAST Acetolactate synthase small subunit, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ILV6 PE=1
SV=2
Length = 309
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 51/208 (24%)
Query: 78 KRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVVSGTERVLRQV 135
K+H ++ V +E G+++R++G A RG+NI+SL V K L TIV+ G + V+ Q
Sbjct: 76 KQHVLNCLVQNEPGVLSRVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVVEQA 135
Query: 136 VEQLNKLVNVIKVEDISNEPHVERELMLIK-------------LNGDTST---------- 172
Q+ LV V V D +N ++REL++ + L+ TST
Sbjct: 136 RRQIEDLVPVYAVLDYTNSEIIKRELVMARISLLGTEYFEDLLLHHHTSTNAGAADSQEL 195
Query: 173 --------------------------WPEIMWLVDIFRAKVVDISEHALTIEVTGDPGKM 206
+I L + F +VVDISE + +E++ P ++
Sbjct: 196 VAEIREKQFHPANLPASEVLRLKHEHLNDITNLTNNFGGRVVDISETSCIVELSAKPTRI 255
Query: 207 VAVQRNLSKFGIKELARTGKIALRREKL 234
A + + FG+ E AR+G +AL R L
Sbjct: 256 SAFLKLVEPFGVLECARSGMMALPRTPL 283
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 313 RSHTLSMLVNNTPGVLNIVTGVISRRGYNI 342
+ H L+ LV N PGVL+ V+G ++ RG+NI
Sbjct: 76 KQHVLNCLVQNEPGVLSRVSGTLAARGFNI 105
>sp|O60086|ILV6_SCHPO Probable acetolactate synthase small subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC14C8.04 PE=1 SV=2
Length = 289
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 68 SVPPITASKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKAL--FTIVV 125
S P + KRH + V +E G+++R++G+ A RG+NI+SL V + L TIV+
Sbjct: 59 STPFNRVQRPKRHVFNCLVQNEPGVLSRLSGILAARGFNIDSLVVCATEVENLSRMTIVL 118
Query: 126 SGTERVLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIK-------------------- 165
G + V+ Q Q+ +V+V V D + VEREL+L K
Sbjct: 119 RGADEVVEQAKRQIEDIVSVWAVLDYTGTSMVERELLLAKVSLLGPDHFQEHFERSEKVA 178
Query: 166 --------------------LNGDTSTWPEIMWLVDIFRAKVVDISEHALTIEVTGDPGK 205
L S I L +F +V DIS + +E+T P +
Sbjct: 179 ESTNAKAKSDGEGVMNANAALQLRASQLAAINQLTTLFHGRVADISTETIILELTATPDR 238
Query: 206 MVAVQRNLSKFGIKELARTGKIALRR 231
+ L +G+ E RTG A+ R
Sbjct: 239 VDNFLSLLRPYGVLEACRTGTSAMTR 264
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 313 RSHTLSMLVNNTPGVLNIVTGVISRRGYNI 342
+ H + LV N PGVL+ ++G+++ RG+NI
Sbjct: 69 KRHVFNCLVQNEPGVLSRLSGILAARGFNI 98
>sp|P0ADF8|ILVN_ECOLI Acetolactate synthase isozyme 1 small subunit OS=Escherichia coli
(strain K12) GN=ilvN PE=1 SV=1
Length = 96
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 82 ISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVVEQL 139
+ + V + G++ + G+FARR +N+E + + DK+ ++V+ +R L Q++ Q+
Sbjct: 11 LELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQR-LEQMISQI 69
Query: 140 NKLVNVIKVEDISNEP 155
+KL +V+KV+ ++P
Sbjct: 70 DKLEDVVKVQRNQSDP 85
>sp|P0ADF9|ILVN_ECOL6 Acetolactate synthase isozyme 1 small subunit OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ilvN PE=3
SV=1
Length = 96
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 82 ISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVVEQL 139
+ + V + G++ + G+FARR +N+E + + DK+ ++V+ +R L Q++ Q+
Sbjct: 11 LELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQR-LEQMISQI 69
Query: 140 NKLVNVIKVEDISNEP 155
+KL +V+KV+ ++P
Sbjct: 70 DKLEDVVKVQRNQSDP 85
>sp|P0ADG0|ILVN_ECO57 Acetolactate synthase isozyme 1 small subunit OS=Escherichia coli
O157:H7 GN=ilvN PE=3 SV=1
Length = 96
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 82 ISVFVGDESGIINRIAGVFARRGYNIESLAVG--LNVDKALFTIVVSGTERVLRQVVEQL 139
+ + V + G++ + G+FARR +N+E + + DK+ ++V+ +R L Q++ Q+
Sbjct: 11 LELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQR-LEQMISQI 69
Query: 140 NKLVNVIKVEDISNEP 155
+KL +V+KV+ ++P
Sbjct: 70 DKLEDVVKVQRNQSDP 85
>sp|Q2Y5Q1|GLND_NITMU [Protein-PII] uridylyltransferase OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=glnD PE=3 SV=1
Length = 887
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 80 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKALFTIVVSGTERVLRQVVEQL 139
+ +S+ GD+SG+++RIA V R G N+ S + ++A T +V+G+ + V QL
Sbjct: 795 YVLSITAGDQSGLLSRIAQVLVRFGLNVHSARINTLGERAEDTFLVTGSILSNSRSVIQL 854
Query: 140 NKLVNVIKVEDISNEP 155
N+IKV S +P
Sbjct: 855 E--ANLIKVLHTSPQP 868
>sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300
PE=1 SV=2
Length = 1388
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 53 TASGSTSNNALPVSQSVPPITASKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLA- 111
+A+ S N+ LP S+++ + +KR +++ ++ + G + G + +L
Sbjct: 1068 SAAYSLVNDTLPESRNIYVASRRNLKRKSVA-------DVVESLIGAYLSEGGELAALMF 1120
Query: 112 ---VGLNVDKALFTIVVSGTERVLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNG 168
VG+ VD FT T ++ R Q KLVNV +E + N ++ L++ L
Sbjct: 1121 MNWVGIKVD---FT-----TTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEALTH 1172
Query: 169 DTSTWPEI 176
+ PEI
Sbjct: 1173 GSYMMPEI 1180
>sp|P91252|GST6_CAEEL Probable glutathione S-transferase 6 OS=Caenorhabditis elegans
GN=gst-6 PE=3 SV=2
Length = 206
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 197 IEVTGDP-GKMVAVQRNLSK-FGIK-----ELARTGKIALR-REKLGDTAPFWNFSAASY 248
+EV G P G+ A+ R L++ FGI E A IA + ++ L D +P+ A
Sbjct: 54 LEVDGKPLGQSYAIARYLAREFGIAGQNDTEAAEVDAIADQFKDYLNDVSPYLTVLAGFK 113
Query: 249 PDLEEKKRTGIFIPETNQSLNGNANVDTSSRGDVY 283
P +++ RT +F+P ++ N+ S+ +
Sbjct: 114 PGDKDQLRTDVFVPAFKKNFEFFENILASNHSGFF 148
>sp|Q97JN9|Y1234_CLOAB UPF0735 ACT domain-containing protein CA_C1234 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=CA_C1234 PE=3 SV=1
Length = 155
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 76 KVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGL---NVDKALFTIVVSGTERVL 132
K ++ TIS+ + G ++ + A+R NI ++ + N T +SG +
Sbjct: 74 KSQKVTISILIEHRRGTLSEVLDKLAQRCCNILTINQDIPINNTANVNITFDISGISGDV 133
Query: 133 RQVVEQLNKLVNVIKVEDISNE 154
+ +VE+L K+ NV+KVE ++ E
Sbjct: 134 KNIVEELKKIKNVLKVEIVAME 155
>sp|A0QVM3|RIMP_MYCS2 Ribosome maturation factor RimP OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=rimP PE=3 SV=1
Length = 181
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 92 IINRIAGVFARRGYNIESLAVGLNVDKALFTIVVSGTERVLRQVVEQLNKLVN-VIKVED 150
+I + G FAR GY I+ + V A TIV G + + V L++L + ++ D
Sbjct: 18 VIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDTVD 77
Query: 151 ISNEPHV 157
+ P+V
Sbjct: 78 TGDTPYV 84
>sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1
PE=2 SV=1
Length = 1434
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 18 ITKSCDFVLFWRPPSQGRTSFSSSAEVSSKKLQLVTASGSTSNNALPVSQSVPPITASKV 77
I K C L PPS G+T+ + ++ K + +G S N + + VP TA+ +
Sbjct: 183 IIKPCRMTLLLGPPSSGKTTLLLA--LAGKLDPALKVTGKVSYNGHELHEFVPQRTAAYI 240
Query: 78 KRHTISV 84
+H + +
Sbjct: 241 SQHDLHI 247
>sp|A2C242|SYL_PROM1 Leucine--tRNA ligase OS=Prochlorococcus marinus (strain NATL1A)
GN=leuS PE=3 SV=1
Length = 862
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDT-----STWPEIMWLVDIFRAKVVDIS 191
E LNK+++++ PH+ EL K G+T +WPE F A ++
Sbjct: 751 ETLNKVISILVKITSPFSPHIAEELW--KTIGNTQSIHLQSWPE-------FDAGAIEQD 801
Query: 192 EHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALR 230
L I++ G + +NLSK +++LA + A++
Sbjct: 802 TFKLMIQINGKVRGSINASKNLSKENLEDLAIKTEAAIK 840
>sp|Q46L15|SYL_PROMT Leucine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
GN=leuS PE=3 SV=1
Length = 862
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 137 EQLNKLVNVIKVEDISNEPHVERELMLIKLNGDT-----STWPEIMWLVDIFRAKVVDIS 191
E LNK+++++ PH+ EL K G+T +WPE F A ++
Sbjct: 751 ETLNKVISILVKITSPFSPHIAEELW--KTIGNTQSIHLQSWPE-------FDAGAIEQD 801
Query: 192 EHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALR 230
L I++ G + +NLSK +++LA + A++
Sbjct: 802 TFKLMIQINGKVRGSINASKNLSKENLEDLAIKTEAAIK 840
>sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=2
Length = 918
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 111 AVGLNVDKALFTIVVSGTER--VLRQVVEQLNKLVNVIKVEDISNEPHVERELMLIKLNG 168
A+G NV + FT+V+ ER VL +E+LN L + KV + N P + E +L
Sbjct: 652 ALGGNVQREQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLL----- 706
Query: 169 DTSTWPEI 176
WP+I
Sbjct: 707 ----WPDI 710
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,102,430
Number of Sequences: 539616
Number of extensions: 5018063
Number of successful extensions: 15042
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 14936
Number of HSP's gapped (non-prelim): 98
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)