Your job contains 1 sequence.
>018897
MEFSEHGFLEELLALRRDAYTWDTSIPAEMNQIFSDGNWIYDCFDENPAAFSPNSFSAPI
HQQDHFNYNNFFNEAAYCPYGDDQLSAPQLTDSSSMNTLDSHTHTPPSFPIQEEAPLSMM
ELDGEEPNNLLADEFQNLEMLQNCFKVEPVHESPETLPVFNMGTDCLERKSRNKKLGGQP
SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQA
GSNNLETGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGL
EIQQCVISCFNDFAMQASCSEGVEQRETLSCEDIKQALFRNAGYGGKCL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018897
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 639 1.4e-62 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 522 2.4e-57 3
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 573 1.4e-55 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 461 1.0e-43 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 207 3.4e-14 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 203 8.8e-14 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 174 5.2e-12 2
UNIPROTKB|Q5Z988 - symbol:P0548E04.5 "Os06g0724800 protei... 134 5.8e-11 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 162 6.4e-09 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 160 8.7e-09 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 152 1.2e-08 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 157 2.2e-08 1
UNIPROTKB|Q10LR1 - symbol:Os03g0338400 "BHLH transcriptio... 127 1.2e-07 1
TAIR|locus:2828302 - symbol:AT2G40435 species:3702 "Arabi... 125 2.1e-07 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 147 3.1e-07 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 136 6.1e-07 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 142 9.0e-07 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 138 1.3e-06 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 134 2.5e-06 1
TAIR|locus:2078411 - symbol:AT3G56220 species:3702 "Arabi... 114 3.3e-06 1
UNIPROTKB|Q8LII5 - symbol:OJ1167_G06.116 "Putative unchar... 114 6.6e-06 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 137 7.6e-06 2
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 130 1.5e-05 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 130 2.5e-05 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 128 4.4e-05 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 123 5.2e-05 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 125 5.2e-05 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 122 6.4e-05 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 122 7.6e-05 1
UNIPROTKB|Q5WMQ1 - symbol:OSJNBa0053E01.1 "Putative uncha... 108 9.0e-05 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 117 0.00012 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 119 0.00012 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 118 0.00012 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 119 0.00012 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 120 0.00013 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 120 0.00015 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 103 0.00016 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 124 0.00017 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 116 0.00042 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 113 0.00042 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 114 0.00063 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 114 0.00066 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 117 0.00067 1
UNIPROTKB|Q2QYP2 - symbol:LOC_Os12g02020 "Os12g0111400 pr... 92 0.00083 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 114 0.00090 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 112 0.00096 1
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 135/208 (64%), Positives = 159/208 (76%)
Query: 149 PVHESPETLPVFNMGTDCLE-RKSRNKKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPK 207
P+ ES ++ F++G E K ++KKL GQPSKNLMAE LNDRLSMLRSIVPK
Sbjct: 145 PLMESDQSKS-FSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK 203
Query: 208 ISKMDRTSILADTIDYMKELLDKISSLQQEIQ--AGSNNLET----GIFKDVKPNEIVVR 261
ISKMDRTSIL D IDYMKELLDKI+ LQ E Q SNN G KD+ NE +VR
Sbjct: 204 ISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVR 263
Query: 262 NSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSE 321
NSPKF+++R + DTRV+ICC+ KPGLLLSTV +LE LGLEI+QCVISCF+DF++QASCSE
Sbjct: 264 NSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSE 323
Query: 322 GVEQRETLSCEDIKQALFRNAGYGGKCL 349
G EQR+ ++ EDIKQALFRNAGYGG CL
Sbjct: 324 GAEQRDFITSEDIKQALFRNAGYGGSCL 351
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 522 (188.8 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 108/178 (60%), Positives = 134/178 (75%)
Query: 175 KLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSL 234
KL G PSKNLMAE LNDRLSMLRSIVPKISKMDRTSIL DTIDY+KEL ++I +L
Sbjct: 175 KLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTL 234
Query: 235 QQEIQAGSNNLET-GIFKDVKP---NEIVVRNSPKFDVE-RTNMDTRVEICCAGKPGLLL 289
++EI L+ KD NE++VRNS KFDVE R + +TR+EICC PG+LL
Sbjct: 235 EEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGVLL 294
Query: 290 STVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCEDIKQALFRNAGYGGK 347
STV++LE LGLEI+QCV+SCF+DF MQASC + +R+ +S ++IKQ LFR+AGYGG+
Sbjct: 295 STVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQTLFRSAGYGGR 352
Score = 59 (25.8 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 1 MEFSEHGFLEELLALRRD 18
ME E FL+EL++LRRD
Sbjct: 1 MELDEESFLDELMSLRRD 18
Score = 38 (18.4 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 80 YGDDQLSAPQL--TDSSSMNTLDSHTHTPPSFPIQE 113
YG D SA D+S L S PP P +E
Sbjct: 48 YGGDGGSAEARGGMDASPFQELASMAAPPPQHPHEE 83
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 136/278 (48%), Positives = 178/278 (64%)
Query: 82 DDQLSAPQLTDSSSMNTLDSHT---HTPP--SFPIQEEAPLSMMELDGEEPNNLLADEFQ 136
DD + P + SS MN + H PP S P+ + PLS D +++ +
Sbjct: 48 DDNIDHP--SSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSA-FDYPFLEDIIHSSYS 104
Query: 137 NLEMLQNCFKVEPVHESP---ETLPVFNMGTDCLERKSRNKKLGGQPSKNLMAEXXXXXX 193
++ + + SP E+ ++G +K NKKL GQPSKNLMAE
Sbjct: 105 PPPLILPASQENTNNYSPLMEESKSFISIGET--NKKRSNKKLEGQPSKNLMAERRRRKR 162
Query: 194 LNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQA-GSNN-LETGIFK 251
LNDRLS+LRSIVPKI+KMDRTSIL D IDYMKELLDKI+ LQ++ Q GSN+ L T I
Sbjct: 163 LNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLI-- 220
Query: 252 DVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFN 311
NE +VRNS KF+V++ ++T ++ICC KPGL++STV++LE LGLEI+QCVISCF+
Sbjct: 221 ---TNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFS 277
Query: 312 DFAMQASCSEGVEQRETLSCEDIKQALFRNAGYGGKCL 349
DF++QASC E EQR ++ E KQAL RNAGYGG+CL
Sbjct: 278 DFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 105/188 (55%), Positives = 129/188 (68%)
Query: 178 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQE 237
G PSKNLMAE LNDRLSMLRS+VP+ISKMDRTSIL DTI Y+KEL+D+I +LQ E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
Query: 238 IQAGSN------NLETGIFKDVKP-------NEI-VVRNSPKFDVERT-NMDTRVEICCA 282
G + NL +KP E ++RNS +F+VER N TR+E+ CA
Sbjct: 252 AATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRENGSTRIEMACA 311
Query: 283 GKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRE-TLSCEDIKQALFRN 341
P LL ST+ +LEALG+EI+QCVISCF+DFAMQASC + ++RE T E+IKQ LFR+
Sbjct: 312 AIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRS 371
Query: 342 AGYGGKCL 349
AGYG CL
Sbjct: 372 AGYGDGCL 379
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 175 KLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSL 234
K G P+KNLMAE LNDRL MLRS+VPKISKMDR SIL D I+Y+KELL KI+ L
Sbjct: 329 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDL 388
Query: 235 QQEIQA 240
Q E+++
Sbjct: 389 QNELES 394
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 157 LPVFNMGTDCLERKSRNKKLGGQPSK-NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTS 215
+P N+ + RK N +L S +++ L D + L+ ++ KI+ +
Sbjct: 333 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNEL 392
Query: 216 ILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFKDVKPNEIVVRNSPKFDVE-RTNMD 274
+ + L + + ++ I P+ P+ +V R
Sbjct: 393 ESSPATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSP--TGQQPRVEVRLREGRA 450
Query: 275 TRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCEDI 334
+ + CA +PGLLLS + ++E LGL++QQ VISCFN F + +E + L E+I
Sbjct: 451 VNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTLDIFKAEQCKDGPGLLPEEI 510
Query: 335 KQALFRNAGY 344
K L ++AG+
Sbjct: 511 KAVLMQSAGF 520
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 203 (76.5 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 175 KLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSL 234
K G P+KNLMAE LNDRL MLRS+VPKISKMDR SIL D IDY+KELL +I+ L
Sbjct: 300 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359
Query: 235 QQEIQA 240
E+++
Sbjct: 360 HNELES 365
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 157 LPVFNMGTDCLERKSRNKKLGGQPSK-NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTS 215
+P N+ + RK N +L S +++ L D + L+ ++ +I+ D +
Sbjct: 304 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN--DLHN 361
Query: 216 ILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFKDVKPNEIVVRNSPKFDVE---RTN 272
L T L SS + L + +++ P+ + + VE R
Sbjct: 362 ELEST---PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREG 418
Query: 273 MDTRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCE 332
+ + C +PGLLL+T+ +L+ LGL++QQ VISCFN FA+ +E ++ + + +
Sbjct: 419 RAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPD 478
Query: 333 DIKQALFRNAGYGG 346
IK LF AGY G
Sbjct: 479 QIKAVLFDTAGYAG 492
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 174 (66.3 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 163 GTDCLER------KSRNKKLG-GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTS 215
G+DC ++ KK G G +KNLMAE LNDRL LRS+VP+I+K+DR S
Sbjct: 288 GSDCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRAS 347
Query: 216 ILADTIDYMKELLDKISSLQQEIQAGSNNLETG 248
IL D I+Y+KEL ++ LQ E++ S E G
Sbjct: 348 ILGDAINYVKELQNEAKELQDELEENSET-EDG 379
Score = 57 (25.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 264 PKFDVERTN-MDTRVEICCAGKPGLLLSTVTSLEALGLEI 302
P+ DV + + + V++ C KPG + +L++LGLE+
Sbjct: 428 PQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEV 467
>UNIPROTKB|Q5Z988 [details] [associations]
symbol:P0548E04.5 "Os06g0724800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 eggNOG:NOG245311
EMBL:AP003685 EMBL:AP007231 EMBL:AK063523 RefSeq:NP_001175006.1
UniGene:Os.11409 EnsemblPlants:LOC_Os06g50900.1 GeneID:9271931
KEGG:osa:9271931 Uniprot:Q5Z988
Length = 213
Score = 134 (52.2 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 171 SRNKKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDR 213
S+ K++ G PSKNLMAE LNDRLSMLRS+VPKISK+ R
Sbjct: 144 SKKKRVEGMPSKNLMAERRRRKRLNDRLSMLRSVVPKISKVYR 186
Score = 71 (30.1 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 1 MEFSEHGFLEELLALRRDAYTWDTSIPAEMNQIFSDGNWIYDCFDE 46
ME E FLEEL +LRRDA+ ++ M FS D F E
Sbjct: 1 MELDEQAFLEELFSLRRDAWEYNA-----MGDFFSPACAAMDGFQE 41
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 58/191 (30%), Positives = 90/191 (47%)
Query: 169 RKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKE 226
RK K G +P ++ AE LN R LR++VP +SKMD+ S+L D I Y+ E
Sbjct: 401 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISE 460
Query: 227 L---LDKISSLQQEIQAGSN--NLETGIFKD-VKPNEIVVRNSP-----KFDVERTNMDT 275
L L K S ++E+Q + N E G K VK + + + S + DV+ D
Sbjct: 461 LKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDA 520
Query: 276 RVEICCAGK--PGLLLSTVTSLEALGLEIQQCVISCFNDFAMQ-ASCSEGVEQRETLSCE 332
+ I C+ + PG + +L+ L LE+ +S ND +Q A+ G + + +
Sbjct: 521 MIRIQCSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQQATVKMG---NQFFTQD 575
Query: 333 DIKQALFRNAG 343
+K AL G
Sbjct: 576 QLKVALTEKVG 586
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 65/256 (25%), Positives = 111/256 (43%)
Query: 95 SMNTLDSHTHTPPSFPIQEEAPLSMMELDGEEPNNLLADEFQNLEMLQNCF---KVE--P 149
S +TLD+H ++ L P +LL+D +Q+ F +VE
Sbjct: 264 STHTLDTHMDMMNLMEEGGNYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGK 323
Query: 150 VHESPETLP----VFNM---GTDCLERKSRNKKLGGQPSKNLMAEXXXXXXLNDRLSMLR 202
H+ +T P V L +++K+L + +++AE LN++ LR
Sbjct: 324 EHQQVKTAPSSQWVLKQMIFRVPFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLR 383
Query: 203 SIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFKDVKPNEIVVRN 262
S+VP ++KMD+ SIL DTI Y+ L ++ L+ + T K +
Sbjct: 384 SMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQHK-RTRTCKR--------KT 434
Query: 263 SPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEG 322
S + +V D +E+ C + GLLL + L LG+E V + ND +A
Sbjct: 435 SEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETT-AVHTSVNDHDFEAEIRAK 493
Query: 323 VEQRETLSCEDIKQAL 338
V ++ S ++K+A+
Sbjct: 494 VRGKKA-SIAEVKRAI 508
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 181 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQ 239
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDYM+EL+D+ +L+ EI+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIR 111
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 169 RKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKE 226
RK K G +P ++ AE LN R LRS+VP ISKMD+ S+L D I Y+KE
Sbjct: 380 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKE 439
Query: 227 LLDKISSLQQEIQAGSNNLETGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEI 279
L +K+ ++ E +L + N I V SP+ D++ N + V +
Sbjct: 440 LQEKVKIMEDERVGTDKSLS-------ESNTITVEESPEVDIQAMNEEVVVRV 485
>UNIPROTKB|Q10LR1 [details] [associations]
symbol:Os03g0338400 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 SMART:SM00353 GO:GO:0005634
EMBL:DP000009 EMBL:AP008209 Gene3D:4.10.280.10 EMBL:CM000140
EMBL:GU120349 EMBL:AK073378 RefSeq:NP_001050055.1 UniGene:Os.53575
EnsemblPlants:LOC_Os03g21970.1 GeneID:4332778 KEGG:osa:4332778
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 Uniprot:Q10LR1
Length = 163
Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 187 EXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLE 246
E L ++L +LRSI + + TSIL D Y+KEL K+ L QEI + L
Sbjct: 6 ERKKAAALQEKLQILRSITHSHA-LSNTSILMDASKYIKELKQKVVRLNQEIACAQDAL- 63
Query: 247 TGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGK--PGLLLSTVTSLEALGLEIQQ 304
+ N + V E V + +GK PGLL+S + + + LGL + +
Sbjct: 64 -------RQNRVTV--------ETLRHGFLVNVF-SGKSCPGLLVSILEAFDELGLSVLE 107
Query: 305 CVISCFNDFAMQASCSEGVEQRETLSCEDIKQALFR 340
SC + F ++A SE + E + +KQA+ R
Sbjct: 108 ATASCTDTFRLEAIGSENL--MEKVDEHVVKQAVLR 141
>TAIR|locus:2828302 [details] [associations]
symbol:AT2G40435 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002336 EMBL:AC007020
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 EMBL:AY227635
EMBL:AY649272 EMBL:AK220685 IPI:IPI00531488 RefSeq:NP_565932.1
UniGene:At.37051 ProteinModelPortal:Q8RUZ5 SMR:Q8RUZ5 PRIDE:Q8RUZ5
EnsemblPlants:AT2G40435.1 GeneID:818637 KEGG:ath:AT2G40435
TAIR:At2g40435 HOGENOM:HOG000241360 InParanoid:Q8RUZ5
PhylomeDB:Q8RUZ5 ArrayExpress:Q8RUZ5 Genevestigator:Q8RUZ5
Uniprot:Q8RUZ5
Length = 158
Score = 125 (49.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 194 LNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFKDV 253
L ++ +LRSI ++ D TSI+ D Y+++L K+ Q+ A ++ E D
Sbjct: 11 LQEKFQLLRSITNSHAEND-TSIIMDASKYIQKLKQKVERFNQDPTAEQSSSEP---TDP 66
Query: 254 KPNEIVVRNSPKFDVERTNMDTRVEICCAGK--PGLLLSTVTSLEALGLEIQQCVISCFN 311
K +P VE + + + +GK PG+L+S + + E +GL + + SC +
Sbjct: 67 K--------TPMVTVETLDKGFMINVF-SGKNQPGMLVSVLEAFEDIGLNVLEARASCTD 117
Query: 312 DFAMQASCSEGVEQRETLSCEDIKQAL 338
F++ A E E E + E +KQA+
Sbjct: 118 SFSLHAMGLEN-EDGENMDAEAVKQAV 143
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 55/193 (28%), Positives = 86/193 (44%)
Query: 169 RKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKE 226
RK K G +P ++ AE LN R LR++VP +SKMD+ S+L D I Y+ E
Sbjct: 400 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINE 459
Query: 227 LLDKISSLQ---QEIQA--------GSNNLETGI-FKDVKP-NEIVVRNS--PKFDVERT 271
L K+ + +EIQ G+N G K+ K N+ +S + DV+
Sbjct: 460 LKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKII 519
Query: 272 NMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQ-ASCSEGVEQRETLS 330
D + + C K + +L+ L LE+ +S ND +Q A+ G + +
Sbjct: 520 GWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMG---SQFFN 576
Query: 331 CEDIKQALFRNAG 343
+ +K AL G
Sbjct: 577 HDQLKVALMTKVG 589
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 136 (52.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 179 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEI 238
Q KNL AE LN L LRS+VP I+KMDR SIL D IDY+ L ++ LQ E+
Sbjct: 282 QQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDEL 341
Query: 239 Q 239
+
Sbjct: 342 E 342
Score = 50 (22.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 261 RNSPKFDVERTN-MDTRVEICCAGKPGLLLSTVTSLEALGLEI 302
R P+ +V + + V++ KPG + + ++ ALGLE+
Sbjct: 413 RMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEV 455
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 71/259 (27%), Positives = 113/259 (43%)
Query: 79 PYGDDQLSAPQLTDSSSMNTLDSHTHTPPSFPIQEEAPLSMMELDGEEPNNLLADEFQNL 138
P + +L QL +SS +T+ + + P + +Q L+ D
Sbjct: 235 PNSNSELFPFQL-ESSCSSTVTGNPNPSPVY-LQNRYNLNFSTSSSTLARAPCGDVLSFG 292
Query: 139 EMLQNCFKVE-PVHESPETLPVFNMGTDCLERKSRNKKLGGQPS-------KNLMAEXXX 190
E ++ F+ P S + V T LE+K + KK G +P+ ++ AE
Sbjct: 293 ENVKQSFENRNPNTYSDQIQNVVPHATVMLEKK-KGKKRGRKPAHGRDKPLNHVEAERMR 351
Query: 191 XXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQE-----IQ------ 239
LN R LR++VP +SKMD+TS+L D + Y+ EL K +++ E IQ
Sbjct: 352 REKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELKE 411
Query: 240 -AGSNNLETGIFK-DVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEA 297
AG N + K + K +E++ + K +E + RVE PG L + +L
Sbjct: 412 IAGQRNAIPSVCKYEEKASEMM-KIEVKI-MESDDAMVRVESRKDHHPGARL--MNALMD 467
Query: 298 LGLEIQQCVISCFNDFAMQ 316
L LE+ IS ND +Q
Sbjct: 468 LELEVNHASISVMNDLMIQ 486
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 41/174 (23%), Positives = 79/174 (45%)
Query: 179 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQE- 237
Q ++++AE L+ R L IVP + KMD+ S+L D I Y+K+L D++ L++E
Sbjct: 178 QNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEA 237
Query: 238 ----IQAGSNNLETGIFKDVKPNEIVVRNS---------PKFDVERTNMDTRVEICCAGK 284
++A ++ + D N P+ + + V+I C +
Sbjct: 238 RRRPVEAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIHCENR 297
Query: 285 PGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCEDIKQAL 338
G L++ ++ +E +GL I + F ++ + + +LS +DI + L
Sbjct: 298 KGALITALSEVETIGLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKKL 351
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 182 KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAG 241
++++AE +N R L +++PK+ KMD+ +IL+D Y++EL +K+ +L+++ A
Sbjct: 130 EHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAAR 189
Query: 242 SNNLETGIFKDVKP-NEIVVRNSPKFDVE--RTNMDTRVEICCAGKPGLLLSTVTSLEAL 298
+ N + V P+ +V TN V I C G+++ + +E +
Sbjct: 190 VTEAAMATPSPARAMNHLPV--PPEIEVRCSPTNNVVMVRIHCENGEGVIVRILAEVEEI 247
Query: 299 GLEIQQCVISCFND--FAMQASCSEGVE-QRETLSCEDIKQALFRNA 342
L I + F D M + + + R + +D++Q F A
Sbjct: 248 HLRIINANVMPFLDQGATMIITIAAKAKINRSEVKVQDLEQDRFEKA 294
>TAIR|locus:2078411 [details] [associations]
symbol:AT3G56220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
SMART:SM00353 GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL163763 ProtClustDB:CLSN2693906 OMA:HAESETS
HOGENOM:HOG000241360 EMBL:BT004764 EMBL:AK228035 IPI:IPI00541566
PIR:T47739 RefSeq:NP_191181.1 UniGene:At.34957
ProteinModelPortal:Q9LYM0 SMR:Q9LYM0 IntAct:Q9LYM0 PRIDE:Q9LYM0
EnsemblPlants:AT3G56220.1 GeneID:824788 KEGG:ath:AT3G56220
TAIR:At3g56220 eggNOG:NOG276705 InParanoid:Q9LYM0 PhylomeDB:Q9LYM0
Genevestigator:Q9LYM0 Uniprot:Q9LYM0
Length = 156
Score = 114 (45.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/153 (22%), Positives = 69/153 (45%)
Query: 187 EXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLE 246
E L ++ +LRSI ++ + TSI+ D Y+K+L K+ + + E
Sbjct: 5 EHKRGSSLREKFHLLRSITDSHAESE-TSIIVDASKYIKKLKQKVEKINN-----ATTSE 58
Query: 247 TGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCA-GKPGLLLSTVTSLEALGLEIQQC 305
+ PN +V VE +++ + G+L+ + + E LGL++ +
Sbjct: 59 QSFRESSDPNPMVT-------VETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEA 111
Query: 306 VISCFNDFAMQASCSEGVEQRETLSCEDIKQAL 338
+SC + F++ A S + + + E +KQA+
Sbjct: 112 RVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAV 144
>UNIPROTKB|Q8LII5 [details] [associations]
symbol:OJ1167_G06.116 "Putative uncharacterized protein
OJ1167_G06.116" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 EMBL:AP003817 EMBL:AK242001
EnsemblPlants:LOC_Os07g47960.1 OMA:HAESETS Uniprot:Q8LII5
Length = 157
Score = 114 (45.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 40/153 (26%), Positives = 67/153 (43%)
Query: 187 EXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLE 246
E L+++L +LRSI + + TSI+ D +Y+KEL K+ L +EI E
Sbjct: 5 ERKKAAALHEKLQILRSITHSHA-LSNTSIITDASEYIKELKQKVVRLNKEIACA----E 59
Query: 247 TGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGK-PGLLLSTVTSLEALGLEIQQC 305
+ N I P VE + + PGLL+S + + + LGL + +
Sbjct: 60 AAALRQ---NSI-----PTVTVETLGHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEA 111
Query: 306 VISCFNDFAMQASCSEGVEQRETLSCEDIKQAL 338
SC + F ++A E + + + QA+
Sbjct: 112 TASCDDTFRLEAVGGENQVDEHVIK-QTVLQAI 143
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 137 (53.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 169 RKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKE 226
RK K G +P ++ AE LN R LR++VP +SKMD+ S+L D I Y+ E
Sbjct: 509 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINE 568
Query: 227 LLDKISSLQQEIQAGSNNLET-GIFKDVKP-------NEIVVR-NSPKFDVERTNMDTRV 277
L K+++L+ + + + +E+ +D +P + R ++ + + + ++ +
Sbjct: 569 LRGKLTALETDKETLQSQMESLKKERDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMI 628
Query: 278 EICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQ 316
+ C + +T+L L L++ +S D +Q
Sbjct: 629 RVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQ 667
Score = 41 (19.5 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 19/82 (23%), Positives = 28/82 (34%)
Query: 86 SAPQLTDSSSMNTLDSHTHTP--PSFPIQEEAPLSMMELDGEEPNNLLADEFQNLEMLQN 143
S LT++ S + H TP P+ P Q + + + E + N
Sbjct: 311 STSTLTENPSPSV---HAPTPSQPAAPPQRQ---QQQQQSSQAQQGPFRRELNFSDFASN 364
Query: 144 CFKVEPVHESPETLPVFNMGTD 165
P PET + N G D
Sbjct: 365 GGAAAPPFFKPETGEILNFGND 386
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 132 ADEFQNL-EMLQNCFKVEPVHESPETLPVFNMGTDCLERKSR----NKKL---GGQPSKN 183
+ E QNL N VE + E + N D + + + NKKL SKN
Sbjct: 206 SSETQNLFGNYPNASCVEILREEQTPCLIMNKEKDVVVQNANDSKANKKLLPTENFKSKN 265
Query: 184 LMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSN 243
L +E +N + LR++VPKI+K+++ I +D +DY+ ELL + L+ E++ G N
Sbjct: 266 LHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK-GIN 324
Query: 244 NLETGIFKDVKPNEIVVRNSPKFDVERTNMDTRVE 278
+E K++ E P+ + + + RV+
Sbjct: 325 EMEC---KEIAAEEQSAIADPEAERVSSKSNKRVK 356
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 179 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEI 238
+ + ++E LN+R LRSI+P ISK+D+ SIL DTI+Y+++L ++ L+
Sbjct: 402 ETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCR 461
Query: 239 QAGSNNLETGIFKDVKPNEIVVRNSPK-FDVERTNMDTRV 277
++ + K KP++ R S + +R D V
Sbjct: 462 ESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNV 501
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 33/101 (32%), Positives = 47/101 (46%)
Query: 148 EPVHESPETLPVFNMGTDCLERKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIV 205
E H E V + + +K K G +P ++ AE LN R LR++V
Sbjct: 416 ESDHSDLEASVVKEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVV 475
Query: 206 PKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLE 246
P +SKMD+ S+L D I Y+ EL K+ + E N LE
Sbjct: 476 PNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLE 516
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 160 FNMGTDCLERKSRN---KKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSI 216
+N G D + N +K S+ L++E + D+L LRS+VP I+KMD+ SI
Sbjct: 106 YNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASI 165
Query: 217 LADTIDYMKELLDKISSLQQEIQAGSNNLE-TGIFKDVKPN 256
+ D + Y++EL + L+ +I +L TG +++ P+
Sbjct: 166 VGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPD 206
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 186 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQ----AG 241
AE LN R LR+IVPK+S+MD+ S+L+D + Y++ L KI L+ EI+
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTE 312
Query: 242 SNNLETGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLL 288
++ L+ + P+ + + + K D V++ G+ ++
Sbjct: 313 TDKLDNSS-SNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAII 358
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 178 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQE 237
G +KN++ E LN++L LRS+VP I+KMD+ SI+ D I+Y++ L + + +E
Sbjct: 89 GGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLRE 148
Query: 238 IQA 240
+ A
Sbjct: 149 VAA 151
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 122 (48.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 178 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQE 237
G +++AE +N R L +++P + KMD+ +IL D + Y+KEL +K+ +L++E
Sbjct: 163 GYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
Query: 238 IQAGSNNLETGIFKD-VKPNEIVVRNS------PKFDVERTNMDTRVEICCAGKPGLLLS 290
G + K + + P+ +V V + C GLL+
Sbjct: 223 -DGGGRPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVR 281
Query: 291 TVTSLEALGLEIQQCVISCF 310
++ +E L L I + F
Sbjct: 282 LLSEVEELRLGITHTSVMPF 301
>UNIPROTKB|Q5WMQ1 [details] [associations]
symbol:OSJNBa0053E01.1 "Putative uncharacterized protein
OSJNBa0053E01.1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF01842 SMART:SM00353 GO:GO:0005634
GO:GO:0016597 GO:GO:0008152 EMBL:AP008211 Gene3D:4.10.280.10
EMBL:CM000142 ProtClustDB:CLSN2693906 EMBL:AC134342 EMBL:AK063202
RefSeq:NP_001055237.1 UniGene:Os.11231
EnsemblPlants:LOC_Os05g27090.1 GeneID:4338459 KEGG:osa:4338459
eggNOG:NOG289294 OMA:EARATCA Uniprot:Q5WMQ1
Length = 153
Score = 108 (43.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 37/148 (25%), Positives = 73/148 (49%)
Query: 194 LNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFKDV 253
L+++L +LR++ + +++ SI++D Y+K+L KI++L +E+ N I ++
Sbjct: 11 LHEKLQILRTLTHSHA-VNKMSIISDASTYIKDLKQKIAALNKELGCAKN---MNICEEP 66
Query: 254 KPNEIVVRNSPKFDVERTNMDTRVEICC-AGKPGLLLSTVTSLEALGLEIQQCVISCFND 312
P VVR V+ + + + PGLL S + + + LGL + + SC N
Sbjct: 67 SP---VVR------VQVLDKGFLINVFMDKSSPGLLSSILQAFDELGLTVIEARASCSNS 117
Query: 313 FAMQASCSEGVEQRETLSCEDIKQALFR 340
F ++A E E + ++ A+ +
Sbjct: 118 FRLEAVGGEHEEADGGIDANAVELAVMQ 145
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 181 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEI 238
SKNL AE LN + LR++VPKI+KM + + L+D I+++K L +++ LQ+++
Sbjct: 64 SKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQL 121
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 181 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYM-------KELLDKISS 233
SKN+ E LN++L LR++VPKI+KMD+ SI+ D I ++ ++LLD+IS
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISV 155
Query: 234 LQQEIQAGSNNLETGIFKDVK-PNEIVVRNSPKFD 267
LQ + +E V P+ +R++P D
Sbjct: 156 LQSAAAVAATAVEDVDDSGVTMPSMKKLRSTPPLD 190
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 154 PETLPVFNMGTDCLERKSRNKKLGG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKM 211
P P T RK + GG P ++ AE LN R LR+ VP +S+M
Sbjct: 64 PRNPPATTTTTKRRGRKPGPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRM 123
Query: 212 DRTSILADTIDYMKELLDKISSLQQE 237
D+ S+LAD +DY+ EL ++ L+ E
Sbjct: 124 DKASLLADAVDYIAELRRRVERLEAE 149
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 38/175 (21%), Positives = 87/175 (49%)
Query: 182 KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAG 241
++++AE L+++ L +++P + K D+ +IL D I MK+L +++ +L++E +A
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA- 177
Query: 242 SNNLETGI-------FKDVKPN-----EIVVRNS---PKFDVERTNMDTRVEICCAGKPG 286
+ +E+ I F D +PN + + P+ + + + D + I C G
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKG 237
Query: 287 LLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCEDIKQALFRN 341
+++ + ++E L I+ ++ F D + + +++ ++S I + L RN
Sbjct: 238 CMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMS---ILKDLVRN 289
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 34/143 (23%), Positives = 65/143 (45%)
Query: 186 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNL 245
AE +N L+ LRS++P +K D+ S+LA+ I+++KEL + S++ ++ AG
Sbjct: 128 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMMEDGAAGGEAA 187
Query: 246 ETGI-FKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQ 304
+ + +E+ V + E + R +CC + L+ +L AL L ++
Sbjct: 188 AAPVVLLPTEDDELEVDAAAD---EGGRLVARASLCCEDRADLIPGIARALAALRLRARR 244
Query: 305 CVISCFNDFAMQASCSEGVEQRE 327
I+ VE+ +
Sbjct: 245 AEIATLGGRVRSVLLIAAVEEED 267
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 47/186 (25%), Positives = 89/186 (47%)
Query: 169 RKSRN-KKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPK--ISKMDRTSILADTIDYMK 225
+ ++N +++ Q ++ E +N L+ LRSI+P I + D+ SI+ ID++K
Sbjct: 180 KPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVK 239
Query: 226 ELLDKISSL--QQEIQAGSNNLET----GIFKDVKPNEIVVRN----SPKFDVERTNMDT 275
L ++ SL Q+ Q +N E +++ N++ N S K +E T +++
Sbjct: 240 ILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIES 299
Query: 276 RV--EICCAGKPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETL-SCE 332
V +I C K G LL ++ LE L + I+ + ++ S + +E L S +
Sbjct: 300 HVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSAD 359
Query: 333 DIKQAL 338
+I A+
Sbjct: 360 EITAAI 365
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 103 (41.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 90 LTDSSSMNTLDSHTHTPPSFPIQEEAPLSMMELDGEEPNNLLADEFQNLEMLQNCFKVEP 149
L+ + +N L S T +P F S+++L+ N+++ + + + N + P
Sbjct: 6 LSSNGLLNFLLSETLSPTPFK-------SLVDLEPLPENDVIISK-NTISEISN--QEPP 55
Query: 150 VHESPETLPVFNMGTDCLERKSR----NKKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIV 205
P P N G RK R ++ Q ++ E +N LS+LRS++
Sbjct: 56 PQRQP---PATNRGKKRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLM 112
Query: 206 PK--ISKMDRTSILADTIDYMKELLDKISSLQQE 237
P+ K D+ SI+ ID++KEL K+ SL+ +
Sbjct: 113 PQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQ 146
Score = 56 (24.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 284 KPGLLLSTVTSLEALGLEIQQCVISCFNDFAMQASCSEGVEQRETLSCEDIKQAL 338
KP L V SL++L L I ++ +++A+ + ++ E + S +DI A+
Sbjct: 238 KPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAV 292
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/159 (28%), Positives = 70/159 (44%)
Query: 178 GQPSKN-LMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQ 236
G KN +M+E L + +L+S+VP I K+D+ SILA+TI Y+KEL ++ L+
Sbjct: 239 GSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELES 298
Query: 237 EIQAGSNNLET-------GIFKDVKPNEIVVRNSPK---FDVERTNMDTRVEICCAGKPG 286
Q +ET K V R +P D ER + + V +
Sbjct: 299 SSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNKE 358
Query: 287 LLLSTVTSL-EALGLEIQQCVISCFND-FAMQASCSEGV 323
LLL E L + + D ++QAS S+G+
Sbjct: 359 LLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGL 397
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 44 FDENPAAFSPNSFSAPI 60
+D+N AA P S SA I
Sbjct: 2 YDDNGAADLPTSQSASI 18
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 173 NKKLGGQPSKN-LMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKI 231
N+ G KN +M+E LN+ +L+S+VP I K+D+ SIL++TI Y+KEL ++
Sbjct: 178 NRAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRV 237
Query: 232 SSLQ 235
L+
Sbjct: 238 QELE 241
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 185 MAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNN 244
+AE +N L+ LR +VP K+D+ ++LA I+ +KEL K +
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAA------------ 116
Query: 245 LETGIFKDV--KPNEIVVRNSPKFDVERTNMDT---RVEICCAGKPGLLLSTVTSLEALG 299
E+ IF+D+ + +E+ V+ D E +N +T + CC +P + + L L
Sbjct: 117 -ESPIFQDLPTEADEVTVQPETISDFE-SNTNTIIFKASFCCEDQPEAISEIIRVLTKLQ 174
Query: 300 LE-IQQCVISC-----FNDFAMQASCSEGVEQRETLSCEDIKQAL 338
LE IQ +IS N ++C+E S + +KQ+L
Sbjct: 175 LETIQAEIISVGGRMRINFILKDSNCNETTNI--AASAKALKQSL 217
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 186 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNL 245
AE +N L+ LRSI+P +K D+ S+LA+ I +MKEL + S + Q +
Sbjct: 139 AERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPT--- 195
Query: 246 ETGIFKDVKPNEIVVRNSPKFDVERTNMDTRVEICCAGKPGLLLSTVTSLEALGLEIQQC 305
+ +++ V +S ++ E N+ R CC + L+ + +L++L L +
Sbjct: 196 --------ECDDLTVDSS--YNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKA 245
Query: 306 VIS 308
I+
Sbjct: 246 EIA 248
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 182 KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAG 241
++++AE +N R L +++P + KMD+ +IL+D + Y+KE+ +K+S L+Q G
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQNGG 251
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 169 RKSRNKKLGGQPS--KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKE 226
RK + G+ ++ AE LN R LRS+VP ISKMD+ S+L D + Y+ E
Sbjct: 418 RKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINE 477
Query: 227 LLDKISSLQQEIQA---GSN---NLETGIFKDVKPNEIVVR-NSP 264
L K+ ++ E + SN +L++ I ++ VR N P
Sbjct: 478 LHAKLKVMEAERERLGYSSNPPISLDSDINVQTSGEDVTVRINCP 522
>UNIPROTKB|Q2QYP2 [details] [associations]
symbol:LOC_Os12g02020 "Os12g0111400 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
GO:GO:0005634 EMBL:DP000011 EMBL:AP008218 EMBL:AK062951
RefSeq:NP_001065967.1 UniGene:Os.51497 GeneID:4351296
KEGG:osa:4351296 Uniprot:Q2QYP2
Length = 96
Score = 92 (37.4 bits), Expect = 0.00083, P = 0.00083
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 194 LNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNN 244
L ++L +LRS+ K S + TSIL D Y+KEL DK+S Q+ Q GS +
Sbjct: 12 LEEKLELLRSVT-KSSAANETSILVDASKYIKELKDKVS--QEPEQLGSTS 59
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 160 FNMGTDCLERKSRNKKLGGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILAD 219
F+ G ++ R K G + +K E LN+R L+ ++P SK DR SIL D
Sbjct: 192 FDSGIIEFSKEIRRKGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQD 251
Query: 220 TIDYMKELLDKISSLQQEIQ 239
IDY+ EL ++S L+ ++
Sbjct: 252 GIDYINELRRRVSELKYLVE 271
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 56/248 (22%), Positives = 111/248 (44%)
Query: 79 PYGDD--QLSAPQLTDSSSMNTLDSHTHTPP-SFPIQEEAPLSMMELDGEE-PNNLLADE 134
P DD ++ P++ +++ ++ +H PP S P S L E+ +N + E
Sbjct: 49 PSYDDLIEMKPPKILETTYISP---SSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHE 105
Query: 135 FQNLEMLQNCF--KVEPVHESPETLPVFNM-GTDCLERKSRNKKLGGQPSKNLMAEXXXX 191
+ L + F K+E + + FN GT + SRN+ +++AE
Sbjct: 106 YSPT-YLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQS---NAQDHIIAERKRR 161
Query: 192 XXLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELLDKISSLQQEIQAGSNNLETGIFK 251
L R L ++VP + KMD+ S+L D + ++K L +++ L++ Q LE+ +
Sbjct: 162 EKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEE--QKKERRLESMVL- 218
Query: 252 DVKPNEIVVRNS-----------------PKFDVERTNMDTRVEICCAGKPGLLLSTVTS 294
VK +++++ ++ P+ +V ++ D ++I C + G L +
Sbjct: 219 -VKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAE 277
Query: 295 LEALGLEI 302
+E L + I
Sbjct: 278 IEKLHILI 285
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 335 0.00092 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 609 (65 KB)
Total size of DFA: 235 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.65u 0.13s 30.78t Elapsed: 00:00:02
Total cpu time: 30.65u 0.13s 30.78t Elapsed: 00:00:02
Start: Fri May 10 09:45:27 2013 End: Fri May 10 09:45:29 2013