BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018900
(349 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/294 (87%), Positives = 267/294 (90%)
Query: 50 FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
F A P SRR S+FTVKASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGHEVTI+T
Sbjct: 53 FAAQPICSRRLFTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILT 112
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP 169
VG+E+SDKMKKPPF+RF+EIVSAGGKTVWG+PAEVG VV G FDVVLDNNGK+LDAVRP
Sbjct: 113 VGEESSDKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRP 172
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
V DWAKS+GVKQFLFISSAGIYK DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FR
Sbjct: 173 VVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFR 232
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEAAS
Sbjct: 233 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAAS 292
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK GIDAKKAFPFRNM F
Sbjct: 293 GRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHF 346
>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa]
gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/292 (86%), Positives = 267/292 (91%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
A P SRR S+F VKASAAEKKK+LIVNTNSGGHAVIGFY AKELLGSGHEV+I+TVG
Sbjct: 28 AYPTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVG 87
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+E+SDKMKKPPF+RF+EIV AGGKTVWG+PAEVG V G TFDVVLDNNGK+LD VRPV
Sbjct: 88 EESSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVV 147
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FRPQ
Sbjct: 148 DWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQ 207
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAHVRDLSSMLTLAVENPEAAS N
Sbjct: 208 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGN 267
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
IFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GIDAKKAFPFRNM F
Sbjct: 268 IFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHF 319
>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera]
gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/290 (84%), Positives = 257/290 (88%), Gaps = 3/290 (1%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P S++R S S VKA +KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTIMTVG+E
Sbjct: 53 PTSTKRLSFSTLNVKA---QKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEE 109
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
NSDKMKKPPF+RF+EI SAGGKTVWGDPAEVG VV G FDVVLDNNGK++D VRPV DW
Sbjct: 110 NSDKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDW 169
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
AKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYM
Sbjct: 170 AKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYM 229
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
IGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIF
Sbjct: 230 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIF 289
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
N VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 290 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHF 339
>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/300 (81%), Positives = 266/300 (88%), Gaps = 1/300 (0%)
Query: 45 ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I P + L PA R S+V S+F++ AS KKKVLIVNTNSGGHAVIGFY AKELL SGH
Sbjct: 28 IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTNSGGHAVIGFYFAKELLASGH 87
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDVVLDNNGK+
Sbjct: 88 QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327
>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/300 (81%), Positives = 267/300 (89%), Gaps = 1/300 (0%)
Query: 45 ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I P + L PA R S+V S+F++ AS KKKVLIVNT+SGGHAVIGFY AKELLGSGH
Sbjct: 28 IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTSSGGHAVIGFYFAKELLGSGH 87
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDVVLDNNGK+
Sbjct: 88 QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327
>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/288 (82%), Positives = 256/288 (88%)
Query: 56 SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
S R S+ FTV+ASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGH+VTI+TVG+E+S
Sbjct: 60 SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESS 119
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
DKMKK PFNRF+EI AGG+T+WGDPA+VG ++ G FD VLDNNGK+LDAVRPVADWAK
Sbjct: 120 DKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAK 179
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
SSG KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYISE F +WASFRPQYMIG
Sbjct: 180 SSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIG 239
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
SGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLT AV+NP AAS +IFN
Sbjct: 240 SGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNPAAASGHIFNC 299
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
VSDRAVTLDGMAKLCA+AAG VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 300 VSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDAKKAFPFRNMHF 347
>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/286 (82%), Positives = 257/286 (89%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
R S+V +F+V+AS++ KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTI+TVG+++SDK
Sbjct: 66 RPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDK 125
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
M KPPFNRF+EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 126 MNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSS 185
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
GVKQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSG
Sbjct: 186 GVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSG 245
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
NNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS
Sbjct: 246 NNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS 305
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
RAVTLDGMAKLCAQAAG PV IVHYDPKA G+DAKKAFPFRNM F
Sbjct: 306 GRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHF 351
>gi|255559448|ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223540129|gb|EEF41706.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 398
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/300 (85%), Positives = 269/300 (89%), Gaps = 2/300 (0%)
Query: 45 ISPSSFLACPASSRRSSVSAF-TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I+P+S LA PA SRR S S+ TVKASAA KKKVLIVNTNSGGHAVIGFY AKELLGSGH
Sbjct: 48 ITPTS-LAYPACSRRFSASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGH 106
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
EVTI TVGDENSDKMKKPPF+RF+EIVSAGGKTVWGDPAEVG VV G TFDVVLDNNGK+
Sbjct: 107 EVTIFTVGDENSDKMKKPPFSRFSEIVSAGGKTVWGDPAEVGKVVEGATFDVVLDNNGKD 166
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
LD VRPVADWAKS+G KQFL+ISSAGIY P DEPPHVEGD VK A HV VEKYI+E FS
Sbjct: 167 LDTVRPVADWAKSAGAKQFLYISSAGIYVPTDEPPHVEGDAVKSSASHVAVEKYIAEVFS 226
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNI+HVRDLSSMLT +VE
Sbjct: 227 SWAVFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNISHVRDLSSMLTKSVE 286
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
NPEAA NIFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA GIDAKKAFPFRNM F
Sbjct: 287 NPEAAGGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAVGIDAKKAFPFRNMHF 346
>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]
Length = 401
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/345 (73%), Positives = 284/345 (82%), Gaps = 4/345 (1%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
MA LASSS +LL +S S L L S L S S L S S+FL+ P+ S R
Sbjct: 1 MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ + ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59 LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG TVWG+PA+VG+VVGG FDVVLDNNGK+L++VRPV DWAKS+G
Sbjct: 119 KKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAG 178
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI E F +WA FRPQYM GSGN
Sbjct: 179 AKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEETFDSWAVFRPQYMTGSGN 238
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTLAVENP+AA+ +IFN VSD
Sbjct: 239 NKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTLAVENPDAANHSIFNCVSD 298
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
RAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN+ F
Sbjct: 299 RAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRNVHF 343
>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/289 (82%), Positives = 255/289 (88%), Gaps = 1/289 (0%)
Query: 56 SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
+SRR S FTVKAS+ +KK VLIVNTNSGGHAVIGFY AKELL +GH VTIMTVGDE+
Sbjct: 62 TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDES 121
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
SDKMKKPPFNRF+EI+S GGKTVWG+PA+V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 122 SDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 181
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
KSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 182 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMI 241
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NP+AAS NIFN
Sbjct: 242 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNIFN 301
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 302 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHF 350
>gi|356500206|ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 403
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/345 (75%), Positives = 293/345 (84%), Gaps = 2/345 (0%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPAS--SR 58
MAT+ASSSS++L S+ S L S P + RLSFSS H SS SFL+ +S +
Sbjct: 1 MATIASSSSTVLFSASSSNLLPFSHPSTSRLSFSSSLHSSSFSLSISPSFLSYYSSSSTH 60
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ +AF++ ASAAEKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVG+E SDKM
Sbjct: 61 FATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM 120
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG+TVWG+PAEVG+VVGG FDVVLDNNGK+L+ VRPV DWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAKSSG 180
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
VKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E F +WA FRPQYMIGSGN
Sbjct: 181 VKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGN 240
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEAA+ IFN VSD
Sbjct: 241 NKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSD 300
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
RAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPFR F
Sbjct: 301 RAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHF 345
>gi|356535978|ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 404
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/271 (84%), Positives = 246/271 (90%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
EKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVGDE SDKMKKPPFNRF+EIVSA
Sbjct: 76 EKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVSA 135
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
GG+TVWG+PA+VG+VVGG FDVVLDNNGK+L VRPV DWAKSSGVKQFLFISSAGIYK
Sbjct: 136 GGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKSSGVKQFLFISSAGIYK 195
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P DEPPHVEGDVVK DAGHV+VEKYI E + +WA FRPQYMIGSGNNKDCEEWFFDRIVR
Sbjct: 196 PTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAVFRPQYMIGSGNNKDCEEWFFDRIVR 255
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEAA+ IFN VSDRAVTLDG+AKLCAQ
Sbjct: 256 DRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSDRAVTLDGIAKLCAQ 315
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG PV IVHYDPKA G+DAKKAFPFR F
Sbjct: 316 AAGRPVNIVHYDPKAVGVDAKKAFPFRTYHF 346
>gi|15229384|ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240 [Arabidopsis thaliana]
gi|7573443|emb|CAB87759.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
Length = 406
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/289 (82%), Positives = 253/289 (87%), Gaps = 1/289 (0%)
Query: 56 SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
+SRR S FTVKAS+ EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
KSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct: 240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAF FRNM F
Sbjct: 300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHF 348
>gi|255647134|gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/345 (75%), Positives = 291/345 (84%), Gaps = 2/345 (0%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPAS--SR 58
MAT+ASSSS++L S+ S L S P + RLSFSS H SS SFL+ +S +
Sbjct: 1 MATIASSSSTVLFSASSSNLLPFSHPSTSRLSFSSSLHSSSFSLSISPSFLSYYSSSSTH 60
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ +AF++ ASAAEKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVG+E SDKM
Sbjct: 61 FATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM 120
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG+TVWG+PAEVG+VVGG FDVVLDNNGK L+ VRPV DWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKGLETVRPVIDWAKSSG 180
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
VKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E F +WA FRPQYMIGSGN
Sbjct: 181 VKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGN 240
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAV NPEAA+ IFN VSD
Sbjct: 241 NKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVGNPEAANQTIFNCVSD 300
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
RAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPFR F
Sbjct: 301 RAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHF 345
>gi|357440745|ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein [Medicago truncatula]
Length = 419
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/363 (69%), Positives = 283/363 (77%), Gaps = 22/363 (6%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
MA LASSS +LL +S S L L S L S S L S S+FL+ P+ S R
Sbjct: 1 MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ + ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59 LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118
Query: 119 KKPPFNRF------------------NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNN 160
KKPPFNRF EIVSAGG TVWG+PA+VG+VVGG FDVVLDNN
Sbjct: 119 KKPPFNRFSIIIITSRFNLLLNLKNIQEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNN 178
Query: 161 GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 220
GK+L++VRPV DWAKS+G KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI E
Sbjct: 179 GKDLESVRPVIDWAKSAGAKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEE 238
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
F +WA FRPQYM GSGNNKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTL
Sbjct: 239 TFDSWAVFRPQYMTGSGNNKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTL 298
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
AVENP+AA+ +IFN VSDRAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN
Sbjct: 299 AVENPDAANHSIFNCVSDRAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRN 358
Query: 341 MVF 343
+ F
Sbjct: 359 VHF 361
>gi|350534514|ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein precursor [Solanum lycopersicum]
Length = 407
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/299 (78%), Positives = 259/299 (86%), Gaps = 5/299 (1%)
Query: 50 FLACPASSRRSSVSAFT----VKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE 104
F+A +SRR S +++ V+AS A EKKKVLIVNTNSGGHAVIGFY AKELLGSGH+
Sbjct: 51 FVAFSLNSRRVSPKSYSSTSVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHD 110
Query: 105 VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNL 164
VT++TVG+E+SDKMKK PF RF+EI AGG+TVWG+PA+VG ++ G FD VLDNNGK+L
Sbjct: 111 VTVLTVGEESSDKMKKTPFTRFSEITGAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDL 170
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
D+V PVADWAKSSGVKQFLFISSAGIYKP DEPPHVEGD VK DAGHV VEKYISE F +
Sbjct: 171 DSVSPVADWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGS 230
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
WASFRPQYMIGSGNNKDCEEWFFDRIVR RPV IPGSGMQ TNI+HVRDLSSMLTLAV+N
Sbjct: 231 WASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQN 290
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
P AAS IFN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 291 PAAASGRIFNCVSDRAVTLDGMARLCAKAAGSSVEIVHYDPKAVGVDAKKAFPFRNMHF 349
>gi|1532135|gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
oleracea]
Length = 415
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/275 (78%), Positives = 243/275 (88%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
+++ +KKKVLIVNTNSGGHAVIGFY AKELLGSGH+VT+ TVGDE SDKMKKPPF RF+E
Sbjct: 84 STSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKMKKPPFTRFSE 143
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
I SAGGKTVWG+PA++GNVVGG FDVVLDNNGK+L+ V PV DWAKSSG +QFL+ISSA
Sbjct: 144 ITSAGGKTVWGNPADIGNVVGGEAFDVVLDNNGKDLETVSPVVDWAKSSGAEQFLYISSA 203
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
GIY DEPPH+EGD VK A HV VE YI++ F +WA FRPQYMIGSGNNKDCEEWFFD
Sbjct: 204 GIYNSTDEPPHIEGDAVKSSASHVAVEDYIAKTFGSWAVFRPQYMIGSGNNKDCEEWFFD 263
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RPV IPGSGMQ TNI+HV+DLSSMLT+AVENP AAS NIFN VSDRAVTLDGMAK
Sbjct: 264 RIVRDRPVLIPGSGMQLTNISHVKDLSSMLTVAVENPSAASGNIFNCVSDRAVTLDGMAK 323
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
LCA+AAGLPV+I+HY+PKA G+DAKKAFPFRNM F
Sbjct: 324 LCAKAAGLPVKILHYEPKAVGVDAKKAFPFRNMHF 358
>gi|357111159|ref|XP_003557382.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Brachypodium distachyon]
Length = 394
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/279 (79%), Positives = 245/279 (87%), Gaps = 1/279 (0%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
F+V+A AA KK VL+VNTNSGGHAVIGFY AK LL +GH VT++TVGDE SDKMKKPPF+
Sbjct: 56 FSVRAQAA-KKSVLVVNTNSGGHAVIGFYFAKALLAAGHAVTVLTVGDEGSDKMKKPPFS 114
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
RF+E+ SAG KTVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAKS+GV QFLF
Sbjct: 115 RFSELTSAGAKTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLF 174
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE 244
ISSAGIY P DEPPHVEGD VK AGHV VEKYI+ F +WASFRPQYMIGSGNNKDCEE
Sbjct: 175 ISSAGIYTPTDEPPHVEGDAVKGSAGHVGVEKYIAAEFGSWASFRPQYMIGSGNNKDCEE 234
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
WFFDRIVRKRPVPIPGSGMQ TNI+H RDL SMLT+AVE+P+AA+ IFN VSDRAVTLD
Sbjct: 235 WFFDRIVRKRPVPIPGSGMQLTNISHARDLGSMLTMAVESPDAAAGKIFNCVSDRAVTLD 294
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
G+AK+CA AAG VEIVHYDP AAG+DAKKAFPFRNM F
Sbjct: 295 GLAKMCAAAAGAAVEIVHYDPAAAGVDAKKAFPFRNMHF 333
>gi|242043354|ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
gi|241922925|gb|EER96069.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
Length = 407
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 243/279 (87%), Gaps = 2/279 (0%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
V+A AA+K+ VLIVNTNSGGHAVIGFY AKELL +GH VT++TVGDE SDKMKKPPF+RF
Sbjct: 67 VRAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRF 126
Query: 127 NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
+E+ SAGGKTVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAKS+GV QFLFIS
Sbjct: 127 SELTSAGGKTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLFIS 186
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEW 245
SAGIYKP +EPPHVEGD VK AGHV VEKYI+E F S+WASFRPQYMIGSGNNKDCEEW
Sbjct: 187 SAGIYKPTEEPPHVEGDAVKESAGHVAVEKYIAEQFGSSWASFRPQYMIGSGNNKDCEEW 246
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
FFDRIVR RPVPIPG+GMQ TNIAHVRDLS ML+LAVE P AAS IFN VSDRAVTL G
Sbjct: 247 FFDRIVRNRPVPIPGNGMQLTNIAHVRDLSRMLSLAVEKPGAASGKIFNCVSDRAVTLSG 306
Query: 306 MAKLC-AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
MAKLC A A VEIV YDP AAG+DAKKAFPFRNM F
Sbjct: 307 MAKLCAAAAGADAVEIVLYDPAAAGVDAKKAFPFRNMHF 345
>gi|312273913|gb|ADQ57385.1| CSP41A protein [Silene vulgaris]
Length = 306
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/248 (85%), Positives = 229/248 (92%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELLGSGH+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDV
Sbjct: 1 KELLGSGHQVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPTSASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMVF 343
FPFRNM F
Sbjct: 241 FPFRNMHF 248
>gi|312273917|gb|ADQ57387.1| CSP41A-Y protein [Silene latifolia]
Length = 306
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/248 (85%), Positives = 228/248 (91%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELLGSGHEVT+ TVGDE+SDKMKKPPFNRF+EI SAGGKT+WG+PAEVG VVG +FDV
Sbjct: 1 KELLGSGHEVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTIWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYM GSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMTGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMVF 343
FPFRNM F
Sbjct: 241 FPFRNMHF 248
>gi|312273915|gb|ADQ57386.1| CSP41A-X protein [Silene latifolia]
Length = 306
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/248 (85%), Positives = 228/248 (91%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELL SGH+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDV
Sbjct: 1 KELLASGHQVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMVF 343
FPFRNM F
Sbjct: 241 FPFRNMHF 248
>gi|115471157|ref|NP_001059177.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|34393296|dbj|BAC83225.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|50508903|dbj|BAD31699.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|113610713|dbj|BAF21091.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|218199302|gb|EEC81729.1| hypothetical protein OsI_25360 [Oryza sativa Indica Group]
gi|222636664|gb|EEE66796.1| hypothetical protein OsJ_23541 [Oryza sativa Japonica Group]
Length = 392
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
A A R +V+ A+ A KK VLIVNTN GGHAVIGFYLAK+LL +GH VT++TVG
Sbjct: 48 AAAAPRRVGAVTVRAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHAVTVLTVG 107
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-VTFDVVLDNNGKNLDAVRPV 170
DE SDKMKKPPF+RF+E+ SAG TVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PV
Sbjct: 108 DEGSDKMKKPPFSRFSELTSAGATTVWGDPADVGAAVGGGASFDVVLDNNGKDLDAVKPV 167
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
DWAK++GV QFLF+SSAGIY P+DEPPHVEGD VK AGHV VEKYI+E F +WASFRP
Sbjct: 168 VDWAKAAGVAQFLFVSSAGIYTPSDEPPHVEGDAVKESAGHVGVEKYIAEQFGSWASFRP 227
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
QYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNI+HVRDL+SM+ LAVE+P AA+
Sbjct: 228 QYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQVTNISHVRDLASMVALAVESPGAAAG 287
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
IFN VSDRAVT +G+ K+CA AAG EI+HYDP A G+DAKKAFPFRNM F
Sbjct: 288 RIFNCVSDRAVTFNGLVKMCAAAAGAQPEILHYDPAAVGVDAKKAFPFRNMHF 340
>gi|414884012|tpg|DAA60026.1| TPA: hypothetical protein ZEAMMB73_761585 [Zea mays]
Length = 403
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/272 (77%), Positives = 235/272 (86%), Gaps = 2/272 (0%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
+K VLIVNTN GGHAVIGFY AKELL +GH VT++TVGDE SDKMKKPPF+RF+E+ SAG
Sbjct: 71 RKSVLIVNTNGGGHAVIGFYFAKELLAAGHAVTVLTVGDEASDKMKKPPFSRFSELTSAG 130
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
G+TVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAK++GV QFLFISSAGIYKP
Sbjct: 131 GRTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKTAGVGQFLFISSAGIYKP 190
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+EPPHVEGD VK AGHV VEKYI+E F S WASFRPQYMIGSGNNKDCEEWFFDRIVR
Sbjct: 191 TEEPPHVEGDAVKESAGHVGVEKYIAEQFGSCWASFRPQYMIGSGNNKDCEEWFFDRIVR 250
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC-A 311
RPVPIPG+GMQ TN+AHVRDLSSML+LAVE P AA+ +FN VSDRAVTL GMAKLC A
Sbjct: 251 NRPVPIPGNGMQLTNVAHVRDLSSMLSLAVEKPGAAAGRVFNCVSDRAVTLAGMAKLCAA 310
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A V+IV YDP A G+DAKKAFPFRNM F
Sbjct: 311 AAGADAVDIVLYDPAAVGVDAKKAFPFRNMHF 342
>gi|168020071|ref|XP_001762567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686300|gb|EDQ72690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 412
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/351 (62%), Positives = 262/351 (74%), Gaps = 11/351 (3%)
Query: 4 LASSSSSLLLSSP-----PSKLAQASLPPSLRL-----SFSSYSHLSSLVSISPSSFLAC 53
LA S +SL L S PS S+ PSL L +FSS SH + +S S+
Sbjct: 3 LAQSVASLTLGSTAQLQGPSSATPGSVRPSLSLRSNAAAFSSQSHFAGSFGLSWSAQSNG 62
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
++S+ + +A V+A+A E KKVLIVNTNSGGHAVIGF+ AK+L+ +GH VTI+TVG+E
Sbjct: 63 VSTSKSNRGAALVVRAAAGESKKVLIVNTNSGGHAVIGFWTAKDLVDAGHSVTILTVGEE 122
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
SDKMKK PF+RFNE+ G +TVWG+P+++G VG +FDVVLDNNGK LD V+PVADW
Sbjct: 123 LSDKMKKQPFSRFNELREIGVETVWGEPSDLGAAVGSASFDVVLDNNGKTLDVVQPVADW 182
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQY 232
AK++G KQFLFISSAGIYK E PHVEGD VK DAGH QVE Y++E +WASFRPQY
Sbjct: 183 AKANGAKQFLFISSAGIYKSTFEQPHVEGDAVKEDAGHKQVENYLAELGLESWASFRPQY 242
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
M G GNNKDCEEWFFDRI R RPVPIP G+Q TNI+HVRDLSSMLTLAV PEAA+ +I
Sbjct: 243 MTGDGNNKDCEEWFFDRIARGRPVPIPSPGIQVTNISHVRDLSSMLTLAVGKPEAANGSI 302
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
FN VSDR T DG+ K+CA+AAG +IVHYDPKA G+DAKKAFPFRNM F
Sbjct: 303 FNCVSDRGTTFDGLVKMCAKAAGKEAKIVHYDPKAIGVDAKKAFPFRNMHF 353
>gi|148906434|gb|ABR16370.1| unknown [Picea sitchensis]
Length = 423
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/309 (65%), Positives = 243/309 (78%), Gaps = 3/309 (0%)
Query: 37 SHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAK 96
S + S+ SI P F PA R S++ + A + KKVL+VNTNSGGHA+IGF+ AK
Sbjct: 55 SQIYSIRSI-PHPFNWTPARRRPRSLTVKAMAAIGEKSKKVLVVNTNSGGHAMIGFWFAK 113
Query: 97 ELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV 156
+L+ +GH+VT+ TVG+E S+KM KPPF+RF+E+ + G +T WG PAE+G + FD V
Sbjct: 114 DLISAGHQVTVFTVGEEASEKMTKPPFSRFSELRAIGVQTTWGKPAEIGKIFESTMFDAV 173
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
LDNNGK+LD+V+PVADWAK+ G QFL+ISSAGIYKP DEPPHVEGD+VK DA HV VE
Sbjct: 174 LDNNGKDLDSVKPVADWAKTIGANQFLYISSAGIYKPTDEPPHVEGDIVKADASHVAVED 233
Query: 217 YI-SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
Y+ S +F++W +FRPQYMIGSGNNKDCEEWFFDRIVR +PVPIPGSGMQ TNIAHVRD+S
Sbjct: 234 YLRSLSFNSWCTFRPQYMIGSGNNKDCEEWFFDRIVRDKPVPIPGSGMQVTNIAHVRDVS 293
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKK 334
SML LAVE P AA+ N+FN V DRAVT DG+ KLCA+AAG IVHYDPK+ GIDAKK
Sbjct: 294 SMLVLAVEKPTAANGNVFNAVCDRAVTFDGLTKLCAKAAGRETAAIVHYDPKSLGIDAKK 353
Query: 335 AFPFRNMVF 343
AFPFRNM F
Sbjct: 354 AFPFRNMHF 362
>gi|302819110|ref|XP_002991226.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
gi|300140937|gb|EFJ07654.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
Length = 401
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/330 (65%), Positives = 250/330 (75%), Gaps = 5/330 (1%)
Query: 18 SKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRR---SSVSAFTVKASAAEK 74
SKL + SL L S S L SL S A SSRR + A A+
Sbjct: 20 SKLTPGYIASSLSLRSPSASSLHSL-GTSSGIAGAVKKSSRRWRAAKTVAMAAAANEVSN 78
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDKMKKPPF+RF+E+ G
Sbjct: 79 RKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDKMKKPPFSRFSELRDLGV 138
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS GV+QFLFISSAGIYK +
Sbjct: 139 STVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTS 198
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
DEPPHVEGD VK DAGHV VE YIS++ F W+SFRPQYM GSGNNKDCEEWFFDRIVR
Sbjct: 199 DEPPHVEGDPVKVDAGHVGVEDYISKSAFKFWSSFRPQYMTGSGNNKDCEEWFFDRIVRD 258
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
+PVPIP G+Q TNIAHV DLSSM+TLA+ P A+++ IFN VSDRAVT DG+ +LCA+A
Sbjct: 259 KPVPIPSPGIQVTNIAHVSDLSSMITLAIGKPSASNATIFNAVSDRAVTFDGLVRLCARA 318
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A +IVHYD KA GIDAKKAFPFRNM F
Sbjct: 319 AAKEAKIVHYDAKALGIDAKKAFPFRNMHF 348
>gi|302818999|ref|XP_002991171.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
gi|300140999|gb|EFJ07715.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
Length = 401
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/347 (63%), Positives = 259/347 (74%), Gaps = 13/347 (3%)
Query: 10 SLLLSSPPSKLAQASL------PPSLRLSFSSYS-HLSSLVSISPSSFLACPA--SSRR- 59
+L L P S QASL P L SFS S SSL S+ SS +A SSRR
Sbjct: 2 ALSLQFPVSTPRQASLEISKLTPGCLASSFSLRSPSTSSLHSLGTSSGIATAVKKSSRRW 61
Query: 60 --SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
+ A A+ +KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDK
Sbjct: 62 RAAKTVAMAAAANEVSNRKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDK 121
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
MKKPPF+RF+E+ G TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS
Sbjct: 122 MKKPPFSRFSELRDLGVSTVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQ 181
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWASFRPQYMIGS 236
GV+QFLFISSAGIYK +DEPPHVEGD VK DAGHV VE YIS++ F W+SFRPQYM GS
Sbjct: 182 GVEQFLFISSAGIYKTSDEPPHVEGDPVKVDAGHVGVEDYISKSAFKFWSSFRPQYMTGS 241
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
GNNKDCEEWFFDRIVR +PVPIP G+Q TNIAHV DLSSM+TLA+ P A+++ IFN V
Sbjct: 242 GNNKDCEEWFFDRIVRDKPVPIPSPGIQVTNIAHVSDLSSMITLAIGKPSASNATIFNAV 301
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
SD AVT DG+ +LCA+AA +IVHYD KA GIDA+KAFPFRNM F
Sbjct: 302 SDHAVTFDGLVRLCARAAAKEAKIVHYDAKALGIDARKAFPFRNMHF 348
>gi|302819120|ref|XP_002991231.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
gi|300140942|gb|EFJ07659.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
Length = 401
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/330 (64%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 18 SKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRR---SSVSAFTVKASAAEK 74
SKL + S L S S L SL S S +A SSRR + A A+
Sbjct: 20 SKLTPGYIASSFSLQSPSTSSLHSL-GTSSSIAMAVKKSSRRWRAAKTVAMAAAANEVSN 78
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDKMKKPPF+RF+E+ G
Sbjct: 79 RKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDKMKKPPFSRFSELRDLGV 138
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS GV+QFLFISSAGIYK +
Sbjct: 139 STVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTS 198
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
DEPPH+EGD VK DAGHV VE YIS+ F +SFRPQYM GSGNNKDCEEWFFDRIVR
Sbjct: 199 DEPPHLEGDPVKADAGHVGVEDYISKLAFKFCSSFRPQYMTGSGNNKDCEEWFFDRIVRD 258
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
+PVPIP G++ TNIAHV DLSSM+TLA+ P A+++ IFN VSD AVT DG+ +LCA+A
Sbjct: 259 KPVPIPSPGIRVTNIAHVSDLSSMITLAIGKPSASNATIFNAVSDHAVTFDGLVRLCARA 318
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A +IVHYD KA GIDAKKAFPFRNM F
Sbjct: 319 AAKEAKIVHYDAKALGIDAKKAFPFRNMHF 348
>gi|296086699|emb|CBI32334.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/226 (86%), Positives = 203/226 (89%)
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
MKKPPF+RF+EI SAGGKTVWGDPAEVG VV G FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 1 MKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDWAKSS 60
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
GV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYMIGSG
Sbjct: 61 GVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYMIGSG 120
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
NNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIFN VS
Sbjct: 121 NNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIFNCVS 180
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
DRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 181 DRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHF 226
>gi|326523629|dbj|BAJ92985.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 400
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/283 (69%), Positives = 219/283 (77%), Gaps = 32/283 (11%)
Query: 77 VLIVNTNSGGHAV----------------IGFYLAKELLGSGHEVTIMTVGDENSDKMKK 120
VL+VNTNSGGHAV T++TVGDE SDKMKK
Sbjct: 73 VLVVNTNSGGHAVIGFYFAKALLAAGHDV----------------TLLTVGDEASDKMKK 116
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
PPF+RF+E+ SAG KTVWGDPA+VG VG +FDVVLDNNGK+LDAV+PVADWAK++GV
Sbjct: 117 PPFSRFSELTSAGAKTVWGDPADVGAAVGAASFDVVLDNNGKDLDAVKPVADWAKAAGVG 176
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
QFLFISSAGIY DEPPHVEGD VK AGHV VEKYI+ F +WASFRPQYM GSGNNK
Sbjct: 177 QFLFISSAGIYLQTDEPPHVEGDAVKESAGHVGVEKYIAAEFGSWASFRPQYMTGSGNNK 236
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
DCEEWFFDR+VRKRPVPIPGSGMQ TNI+H RDL SMLTLAVENP+AA+ IFN VSDR
Sbjct: 237 DCEEWFFDRVVRKRPVPIPGSGMQLTNISHARDLGSMLTLAVENPDAAAGKIFNCVSDRG 296
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
VTLDG+AK+CA AAG VEIVHYDP A G+DAKKAFPFRNM F
Sbjct: 297 VTLDGLAKMCAAAAGATVEIVHYDPAAVGVDAKKAFPFRNMHF 339
>gi|449532425|ref|XP_004173181.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like, partial [Cucumis sativus]
Length = 274
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 192/216 (88%)
Query: 128 EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSSGVKQFLFISS
Sbjct: 1 EIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISS 60
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
AGIYK DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFF
Sbjct: 61 AGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFF 120
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS RAVTLDGMA
Sbjct: 121 DRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMA 180
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
KLCAQAAG PV IVHYDPKA G+DAKKAFPFRNM F
Sbjct: 181 KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHF 216
>gi|255078270|ref|XP_002502715.1| predicted protein [Micromonas sp. RCC299]
gi|226517980|gb|ACO63973.1| predicted protein [Micromonas sp. RCC299]
Length = 371
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/324 (52%), Positives = 224/324 (69%), Gaps = 14/324 (4%)
Query: 39 LSSLVSISPSSFLACP--------ASSRRSSVSAFTVKA---SAAEKKKVLIVNTNSGGH 87
++S ++ +PS + P AS R + V+ + A +A +KVLIVNTN GGH
Sbjct: 2 VASALAAAPSVCIRTPSGARQIRRASGRNARVARRAIPAVISAAVAPQKVLIVNTNGGGH 61
Query: 88 AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV 147
A IGF+LAK L GH VT+ T+G ++ KM+KPPF FNE+ SAG +TVW DP E+
Sbjct: 62 ANIGFWLAKTLAAQGHSVTLNTIGSKDDKKMQKPPFTYFNELTSAGVQTVWADPGELATK 121
Query: 148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
G FDVV+DNNGK+LD+V PVA +AK G KQFLF+SSAG+YKP PPH+EGD VK
Sbjct: 122 AAGAQFDVVVDNNGKDLDSVGPVAAFAKQCGAKQFLFVSSAGMYKPTPTPPHLEGDAVKE 181
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 267
AGH QVE ++ ++ASFRPQY G GNNKDCEE+FFDR+VR RPV +PGSG Q +
Sbjct: 182 SAGHAQVEAKLATMPFSFASFRPQYFTGYGNNKDCEEYFFDRLVRGRPVLVPGSGDQLSV 241
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+AH D+++M+ AV NP AA+ IFN V+++AVTL+GM +LCA AAG+ +IV+YDPK
Sbjct: 242 VAHAEDVATMMAAAVGNP-AANGVIFNAVTNKAVTLNGMVQLCAAAAGVEPKIVNYDPKK 300
Query: 328 --AGIDAKKAFPFRNMVFIFFYSN 349
G++ KKAFPFR + F + +N
Sbjct: 301 LPEGVEVKKAFPFRPIHFYSYPAN 324
>gi|308811849|ref|XP_003083232.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
gi|116055111|emb|CAL57507.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
Length = 358
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 206/292 (70%), Gaps = 5/292 (1%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R++ + V SA+ KKKVLIVNTN GGHA IGF+LAK L G+GHEVT+ VG E+ KM
Sbjct: 19 RNARAHGVVDVSASGKKKVLIVNTNGGGHANIGFWLAKTLAGAGHEVTMNVVGAEDDKKM 78
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
K PF+ F+EI S G T W DPA+V G FDVV+DNNGK++D V PVAD+A ++G
Sbjct: 79 AKTPFSLFDEIRSMGVTTTWADPADVATKHAGAKFDVVVDNNGKDMDTVGPVADFAVAAG 138
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
QFLF+SSAGIYKP PPHVEGD VK AGH VE ++ +SFRPQY+ G G+
Sbjct: 139 ASQFLFVSSAGIYKPTPCPPHVEGDAVKETAGHAVVEAHLKTLPLKMSSFRPQYLTGYGS 198
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDR+VR RPV +PGSG Q +++ H DL++M+ A+ N + A+ IFN V
Sbjct: 199 NKDCEEWFFDRLVRGRPVLVPGSGDQLSSVTHAEDLATMIAAAIGN-DGAAGEIFNCVMP 257
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMVFIFFYSN 349
+AVTL+GM +LCA AAG+ +I++YDPK ++ KKAFPFR I FYS+
Sbjct: 258 KAVTLNGMVELCAAAAGVEAKIINYDPKDVPDVEVKKAFPFRP---IHFYSS 306
>gi|145353867|ref|XP_001421221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145353942|ref|XP_001421256.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581458|gb|ABO99514.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
gi|144581493|gb|ABO99549.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 203/281 (72%), Gaps = 5/281 (1%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
++ EKK VLIVNTN GGHA IGF+LAK L G+GH+VT+ VG E+ KM K PF+ F+EI
Sbjct: 5 ASGEKKSVLIVNTNGGGHANIGFWLAKTLAGAGHDVTMNVVGAEDDKKMAKTPFSLFDEI 64
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
G KTVW +P EV + G FDVV+DNNGK++D V PVAD+A ++G QFLF+SSAG
Sbjct: 65 RGMGVKTVWANPDEVASKHAGAKFDVVVDNNGKDMDTVGPVADFAVAAGASQFLFVSSAG 124
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
IYKP PPHVEGD VK +GH VE ++ +SFRPQY+ G G+NKDCEEWFFDR
Sbjct: 125 IYKPTPCPPHVEGDAVKETSGHAVVEAHLKTLPLKMSSFRPQYLTGYGSNKDCEEWFFDR 184
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
VR RP+ +PGSG Q +++ H DL++M+ AV N +AA+ IFN V+ +AVTL+GMA+L
Sbjct: 185 AVRGRPILVPGSGDQLSSVTHAEDLATMIAAAVGN-DAAAGEIFNCVTTKAVTLNGMAEL 243
Query: 310 CAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMVFIFFYSN 349
CA+AAG+ +++YDPK ++ KKAFPFR I FYS+
Sbjct: 244 CAKAAGVEPNVINYDPKDVPDVEVKKAFPFRP---IHFYSS 281
>gi|412986493|emb|CCO14919.1| predicted protein [Bathycoccus prasinos]
Length = 369
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 205/310 (66%), Gaps = 17/310 (5%)
Query: 52 ACPASSRRSSVSAFTV--------KAS-AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG 102
+C SSR++ T+ K S E K VLIVNTN GGHA IGF+L+K L +
Sbjct: 13 SCAGSSRKTFAQKRTLLNTPNAVNKVSFKVENKSVLIVNTNGGGHANIGFWLSKTLASAK 72
Query: 103 HEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNG 161
H+VT+ VG+E KM+K PF F ++ G KT+W +PA++ + + G FD+V DNNG
Sbjct: 73 HDVTLCVVGEETDKKMQKAPFTYFEKDLKPMGVKTMWSNPADLKSNLSGAKFDIVCDNNG 132
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE- 220
K+LD+V PVA++AK +G +QF F+SSAGIYKP PPHVEGD VK AGH VEK++ +
Sbjct: 133 KDLDSVGPVAEFAKEAGAEQFFFVSSAGIYKPTPTPPHVEGDAVKETAGHAIVEKHLVDM 192
Query: 221 NF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
F ASFRPQY+ G G+NKDCEE+FFDRI R +P+ IPGSG QF +++H DL++M+
Sbjct: 193 KFPKGMASFRPQYLTGYGSNKDCEEYFFDRIQRGKPIVIPGSGDQFASVSHAEDLATMIA 252
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPF 338
AV+N A IFN V+ + VTL GMA++CA+A G IV Y + G++AKK FPF
Sbjct: 253 SAVDNAN-AKDEIFNCVTQKGVTLRGMAEVCAKAMGKEATIVTYKEGSVEGVEAKKQFPF 311
Query: 339 RNMVFIFFYS 348
R + FY+
Sbjct: 312 R---VVHFYA 318
>gi|303290011|ref|XP_003064293.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454609|gb|EEH51915.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 362
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 197/288 (68%), Gaps = 15/288 (5%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
A + KVLIVNTN GGHA IGF+LAK L GH VT+ VG + KM+KPPF F E+ S
Sbjct: 27 ARRAKVLIVNTNGGGHANIGFWLAKTLAAHGHAVTLCVVGTADDKKMQKPPFTYFGELTS 86
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG KT+W +P ++ + G FDVV+DNNGK++D V PVAD+A +G KQF F+SSAG+Y
Sbjct: 87 AGVKTMWANPNDLATLPGQPEFDVVVDNNGKDMDTVGPVADFAVKAGAKQFFFVSSAGMY 146
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK---------DC 242
P PPH+EGD VK AGH +VE ++ +SFRPQY G GNNK DC
Sbjct: 147 IPTVTPPHLEGDAVKESAGHAKVEAHLKTMPFKMSSFRPQYFTGYGNNKGAFYISYHTDC 206
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFFDRIVR R +P+PGSG Q + +AH D+++M+ AV N +AA+ IFN V++RAVT
Sbjct: 207 EEWFFDRIVRGRTIPVPGSGDQLSVVAHAEDVATMMAAAVGN-DAAAGQIFNAVTNRAVT 265
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMVFIFFYS 348
L+GMA+LCA AAG +I +YDPK G++ KKAFPFR I FYS
Sbjct: 266 LNGMAQLCAAAAGAEPKIANYDPKNLPDGVEVKKAFPFRP---IHFYS 310
>gi|302830021|ref|XP_002946577.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
gi|300268323|gb|EFJ52504.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 440
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 167/273 (61%), Gaps = 10/273 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI NT GGHA IG YLAKELL GH+VTIM GDE S KK PF++++E+ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDE-SKLTKKTPFSKYSELARDGATI 91
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD- 195
WGDP + G +FDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 92 AWGDPTKPSTYPRG-SFDVVYDNNGKDLSSCQPMIDHFKHK-VDHYVFVSSAGAYK-ADS 148
Query: 196 -EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R R
Sbjct: 149 IEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGPNTAKDCEQWFVDRIIRDR 208
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
PVPIP G+Q T++ HV D+++ML L N EA ++N+ SDR ++ G+ K A+A
Sbjct: 209 PVPIPSPGIQLTSLTHVEDVAAMLALVPGNREAI-GQMYNVCSDRCISFVGICKSVAKAL 267
Query: 315 GLPVEIVHYDPKAAGIDAK---KAFPFRNMVFI 344
G IV Y P+ G + FPFR + F
Sbjct: 268 GKEANIVLYSPEKVGTGKSGKAEGFPFRTVHFF 300
>gi|255647281|gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 120/129 (93%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
EKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVGDE SDKMKKPPFNRF+EIVSA
Sbjct: 76 EKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVSA 135
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
GG+TVWG+PA+VG+VVGG FDVVLDNNGK+L VRPV DWAKSSGVKQFLFISSAGIYK
Sbjct: 136 GGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKSSGVKQFLFISSAGIYK 195
Query: 193 PADEPPHVE 201
P DEPPHVE
Sbjct: 196 PTDEPPHVE 204
>gi|159464623|ref|XP_001690541.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|158280041|gb|EDP05800.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 439
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 168/273 (61%), Gaps = 12/273 (4%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSAGGK 135
VLI NT GGHA IG YLAKELL GH+VTIM GD SDK+ KK P+ +++++ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 90
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
VW DPA+ G TFDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 91 VVWADPAKPSTYPRG-TFDVVYDNNGKDLASCQPLIDHFKHK-VDHYVFVSSAGAYK-AD 147
Query: 196 --EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 148 PIEPMHVEGDARKSTAGHVEVEAYLEKARLPYTVFQPLYIYGPNTAKDCEQWFVDRIIRD 207
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPV +P G+Q T++ HV D++SML AV AA +N+ SDR +T G+AK +A
Sbjct: 208 RPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVCSDRCITFTGIAKAIGKA 266
Query: 314 AGLPVEIVHYDPKAAGIDAK---KAFPFRNMVF 343
G EI+ Y P+ G + FPFR + F
Sbjct: 267 LGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHF 299
>gi|34398358|gb|AAO22241.1| 41 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
Length = 439
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 168/273 (61%), Gaps = 12/273 (4%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSAGGK 135
VLI NT GGHA IG YLAKELL GH+VTIM GD SDK+ KK P+ +++++ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 90
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
VW DPA+ G TFDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 91 VVWADPAKPSTYPRG-TFDVVYDNNGKDLASCQPLIDHFKHK-VDHYVFVSSAGAYK-AD 147
Query: 196 --EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 148 PIEPMHVEGDPRKSTAGHVEVEAYLEKARLPYTVFQPLYIYGPNTAKDCEQWFVDRIIRD 207
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPV +P G+Q T++ HV D++SML AV AA +N+ SDR +T G+AK +A
Sbjct: 208 RPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVCSDRCITFTGIAKAIGKA 266
Query: 314 AGLPVEIVHYDPKAAGIDAK---KAFPFRNMVF 343
G EI+ Y P+ G + FPFR + F
Sbjct: 267 LGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHF 299
>gi|384251865|gb|EIE25342.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 168/290 (57%), Gaps = 12/290 (4%)
Query: 56 SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
+SRR S V+A + VLI+NT GGHA IG +LAK+LL +GH VTI+ G E
Sbjct: 30 TSRRERSSCLLVRA-----ENVLIINTKGGGHAEIGLHLAKQLLSAGHSVTILNDG-EQG 83
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
KK PFN++ + A VW +P + FDV+ DNNGK+LD +P D K
Sbjct: 84 KLEKKTPFNQYKSLEKA--TVVWSNPTDTATYPLE-KFDVIYDNNGKDLDTCKPAIDHFK 140
Query: 176 SSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
+ V ++F++SAG YK EP VEGD K AGHV VE Y+ E + F+P Y+
Sbjct: 141 GN-VAHYVFVASAGAYKTNKIEPALVEGDARKEAAGHVAVENYLVEQDLPYTIFQPLYIY 199
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G KD +F DR++R RPVPIP G+Q T+++HV D++S+L V AA +N
Sbjct: 200 GPYTGKDYMPFFLDRLLRNRPVPIPAPGIQLTSLSHVEDVASLLA-KVPGNAAAIGQHYN 258
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+ SDR +T DG+ K A AAG+ IVHYDPKA + + FPFR FI
Sbjct: 259 VASDRYITFDGLVKALADAAGVEANIVHYDPKAVALKKGQGFPFRTEHFI 308
>gi|428317846|ref|YP_007115728.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
gi|428241526|gb|AFZ07312.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
Length = 313
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 150/270 (55%), Gaps = 27/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAE 143
GG IG YL K L GHEV + FNR N+ V AG K + GD
Sbjct: 7 GGTRFIGVYLTKILAAQGHEVVL---------------FNRGNKPVPVAGVKQIQGDRTN 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
V + + V FD V DNNG+ L +P+A+ K V+ F+++SSAG+Y +D+ PH+
Sbjct: 52 VEQLQEKLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHI 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD P + H+ + E Y++E+ W S RP Y+ G N D E WFFDRIVR RP+P
Sbjct: 111 EGDATDPKSRHLGKCETENYLAESGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+GM FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG
Sbjct: 171 IPGNGMHFTQLGHCQDLARAMAAVLGNSRAIGQ-IYNVSGDRFVTFDGLARACIQAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
++IVHYDPK KKAFP R F
Sbjct: 230 PDAIKIVHYDPKQFDFGKKKAFPMRLQHFF 259
>gi|117607073|gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
Length = 169
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/111 (85%), Positives = 100/111 (90%)
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
MIGSGNNKDCEEWFFDRIVR RPV IPGSGM TNIAHVRDLSSMLTLAV+NP AAS +I
Sbjct: 1 MIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMHLTNIAHVRDLSSMLTLAVQNPAAASGHI 60
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
FN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 61 FNCVSDRAVTLDGMARLCAKAAGTSVEIVHYDPKAVGVDAKKAFPFRNMHF 111
>gi|170078373|ref|YP_001735011.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
gi|169886042|gb|ACA99755.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
Length = 310
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 157/278 (56%), Gaps = 30/278 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL +GHEV + FNR N G
Sbjct: 2 RILII----GGTRFIGVYLTQVLLAAGHEVVL---------------FNRGNHPAPMGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD PA++ + G TFD + DNNG+ L +P+A+ + VK F+++SSAG+Y
Sbjct: 43 QIIGDRQEPAQLKEKLAGETFDAIFDNNGRELAHTQPLAE-IFAGKVKHFVYVSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P D+PPH E D V P++ H + E Y++++ W S RP Y+ G+ N D E WFFDR
Sbjct: 102 PTDQPPHKEADPVDPNSRHKGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PIPG G T HV DL++ + ++NP+A I+N+ DR VT G+AK
Sbjct: 162 IVRDRPIPIPGDGQLITQFGHVYDLATAMAAVLDNPKAIGQ-IYNISGDRFVTFTGLAKA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA AAG + +V+Y+PK + +KAFP R F+
Sbjct: 221 CAVAAGKDPDTLALVYYNPKQFDLGKRKAFPIRAQHFM 258
>gi|427710298|ref|YP_007052675.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
gi|427362803|gb|AFY45525.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
Length = 310
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 159/277 (57%), Gaps = 30/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL GHEV + FNR N V +G
Sbjct: 2 RILIM----GGTRFIGVYLTQILLEQGHEVVL---------------FNRGNRSVPSGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD A++ + FD++ DNNG+ L +P+A+ + V+QF+++SSAG+Y
Sbjct: 43 QIIGDRTDAAQLKEKLSQENFDIIFDNNGRELSDTQPLAEIFQGR-VQQFIYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PHVEGD V P + H + E Y++E + S RP Y+ G N + E WFFDR
Sbjct: 102 KSDQLPHVEGDAVDPKSRHKGKHETEAYLAEKGLPFTSIRPTYIYGPSNYNELEGWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+VR RP+PIPG+G+ T + HV+DL++ ++L + N + A I+N+ DR VT DG+A+
Sbjct: 162 VVRDRPIPIPGNGLHITQLGHVQDLATAMSLVIGN-QKAIGQIYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++IVHYDPK +KAFP R F
Sbjct: 221 CAVAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHF 257
>gi|334118011|ref|ZP_08492101.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
gi|333459996|gb|EGK88606.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
Length = 313
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 148/270 (54%), Gaps = 27/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAE 143
GG IG YL K L GHEV + FNR N+ V AG K + GD
Sbjct: 7 GGTRFIGVYLTKILAAQGHEVVL---------------FNRGNKPVPVAGVKQIQGDRTN 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
V + + V FD V DNNG+ L +P+A+ K V+ F+++SSAG+Y +D+ PH+
Sbjct: 52 VEQLQEKLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHI 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD P + H+ + E Y++ + W S RP Y+ G N D E WFFDRI R RP+P
Sbjct: 111 EGDATDPKSRHLGKCETENYLAASGLPWTSIRPTYIYGPQNYNDLEAWFFDRIARDRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+GM FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG
Sbjct: 171 IPGNGMHFTQLGHCQDLAKAMAAVLGNSRAIGQ-IYNVSGDRFVTFDGLARACIQAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
++IVHYDPK KKAFP R F
Sbjct: 230 PDAIKIVHYDPKQFDFGKKKAFPMRLQHFF 259
>gi|428203489|ref|YP_007082078.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
gi|427980921|gb|AFY78521.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
Length = 342
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 155/279 (55%), Gaps = 29/279 (10%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K ++LI+ GG IG YL K L+ GHEV + G+ N AG
Sbjct: 31 KMRILIM----GGTRFIGVYLTKILVERGHEVVLFNRGN--------------NPAPVAG 72
Query: 134 GKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
K + GD +V + + +FD + DNNG+ L +P+A+ K +K F+++SSAG+
Sbjct: 73 VKQIQGDRTDVAQLKEKLASESFDAIFDNNGRELSDTQPLAEIFKDK-IKHFVYVSSAGV 131
Query: 191 YKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PH+EGD V P + H Q E Y+++ W S RP Y+ G N D E WFF
Sbjct: 132 YLKSDQMPHLEGDPVDPKSRHQGKFQTESYLAQAGLPWTSIRPTYIYGPQNYNDLEAWFF 191
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPG+G+ T HV+DL+S + + N E A I+N+ DR VT +G+A
Sbjct: 192 DRIVRDRPIPIPGNGLHITQFGHVKDLASAMAAVLGN-ERAIGEIYNISGDRYVTFEGLA 250
Query: 308 KLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+ CA AAG +++VHYDPK +KAFP R F
Sbjct: 251 RTCAAAAGKSPDDLKLVHYDPKKFDFGKRKAFPIRVQHF 289
>gi|32307602|gb|AAP79206.1| mRNA binding protein [Bigelowiella natans]
Length = 325
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 154/261 (59%), Gaps = 6/261 (2%)
Query: 86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG 145
GH IG++LA +L GH VT++ GD + K K PF+R+ +++ G +GD G
Sbjct: 14 GHGEIGYHLASQLATDGHAVTLL--GDPAT-KKDKLPFSRYGDLMGKGVTIKYGDACSPG 70
Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
+ FD V DN K D+ + AD AK GVK + ++SSAG+YKP P E V
Sbjct: 71 TLQELGEFDAVFDNISKGKDSCKVAADKAKEWGVKHYAYVSSAGMYKPGVIFPMSESLPV 130
Query: 206 KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ 264
K AG +VE Y++ W+SFRPQY+ G NK D ++FFDRIVR RPVP+ G+G Q
Sbjct: 131 KESAGQKEVEDYLNSLGLPWSSFRPQYIYGPLTNKRDYLDYFFDRIVRGRPVPVAGNGQQ 190
Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHY 323
+ H D++SML ++ E A +FN +D+ +T+D + +CA+ AG+P IVHY
Sbjct: 191 LVTLTHAADVASMLGSVLDAGEKAHMKVFNCATDQLITVDDLIHVCAKIAGVPTPRIVHY 250
Query: 324 DPKAAGIDAKKAFPFRNMVFI 344
DPK ++ KKAFPFR+ F
Sbjct: 251 DPKKVKLE-KKAFPFRDSNFF 270
>gi|427731981|ref|YP_007078218.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
gi|427367900|gb|AFY50621.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
Length = 312
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 157/274 (57%), Gaps = 22/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPNLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP ++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DPTQLKEKLLQENFDVIFDNNGRELSDTQPLAEIFQGR-VQHFIYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHVEGDTVDPKSRHKGKHETEAYLQQQGLPFTSIRPTYIYGPMNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ ++ + N +A I+N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPIPIPGNGLHITQLGHVQDLATAMSQVIGNKQAIGQ-IYNISGDRFVTFDGLARACAQ 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG ++IVHYDPK +KAFP R F
Sbjct: 226 AAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|172038692|ref|YP_001805193.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354553970|ref|ZP_08973275.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
gi|171700146|gb|ACB53127.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553649|gb|EHC23040.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
Length = 311
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 154/278 (55%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL KEL+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKQGHEVVL---------------FNRGNKAAPIEGI 42
Query: 136 T-VWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
T + GD + + + +FD + DNNG+ L +P+ + + VK F+++SSAG+Y
Sbjct: 43 TQIHGDRKDANQLKEKLASESFDAIFDNNGRELSDTQPLVEIFNNK-VKHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHIEGDEVDPNSRHKGKFETESYLGKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ FT H++DL+ + + N E A I+N+ +R VT DG+AK
Sbjct: 162 RIVRNRPIPIPGNGLNFTQFGHIQDLAKGMAAVLGN-EQAIGQIYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++IVHYDPK KK FP R F
Sbjct: 221 ACAVAAGKSADDIKIVHYDPKQFDFGKKKVFPLRMQHF 258
>gi|409994115|ref|ZP_11277235.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
gi|291570466|dbj|BAI92738.1| mRNA-binding protein [Arthrospira platensis NIES-39]
gi|409935028|gb|EKN76572.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
Length = 311
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 155/274 (56%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G++ S P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSQGHEVVLFNRGNKPS------PVEGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DSQQLQEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+P+PG+GM T + HV DL++ + +AV + A I+N+ DR VT DG+AK CA
Sbjct: 166 KRPIPVPGNGMHITQLGHVEDLANAM-VAVLGNQTAIGQIYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG ++++HYDPK +KAFP R F
Sbjct: 225 AAGQSPDDLQLIHYDPKKFDFGKRKAFPLRVQHF 258
>gi|376004433|ref|ZP_09782136.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
gi|375327198|emb|CCE17889.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
Length = 311
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 156/274 (56%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G++ S P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSQGHEVVLFNRGNKPS------PVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+PIPG+GM T + HV DL++ + +AV + A ++N+ DR VT DG+AK CA
Sbjct: 166 KRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNQTAIGQVYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG ++++HYDPK +KAFP R F
Sbjct: 225 AAGESPDDLQLIHYDPKNFDFGKRKAFPLRVQHF 258
>gi|428311078|ref|YP_007122055.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
gi|428252690|gb|AFZ18649.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
Length = 311
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 155/276 (56%), Gaps = 25/276 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGG 134
++LI+ GG IG YL K L+ GH+V + G KKP P +I G
Sbjct: 2 RILIM----GGTRFIGVYLTKLLVEQGHDVVLFNRG-------KKPAPVEGIQQI--HGD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+T D +++ N + FD + DNNG+ L +P+A+ K VK F+++SSAG+Y +
Sbjct: 49 RT---DASQLKNKLSQEQFDAIFDNNGRELSDTQPLAEIFKDR-VKHFVYMSSAGVYLKS 104
Query: 195 DEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
D+ PH+EGD V P + H + E ++++ W S RP Y+ G N D E WFFDRIV
Sbjct: 105 DQLPHIEGDPVDPKSRHKGKHETEAFLAQLGLPWTSIRPTYIYGPQNYNDLEAWFFDRIV 164
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
R RP+PIPG+GM T H +DL+ + + N + A I+N+ DR VT DG+A+ CA
Sbjct: 165 RDRPIPIPGNGMHITQFGHCKDLARAMAQVLGN-DRAIGQIYNVSGDRYVTFDGLARACA 223
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
QAAG ++I+HYDPK +KAFP R F
Sbjct: 224 QAAGKSADSIKIMHYDPKKFDFGKRKAFPMRVQHFF 259
>gi|428304521|ref|YP_007141346.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
gi|428246056|gb|AFZ11836.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
Length = 313
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 157/275 (57%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVEQGHEVVLFNRGN------KPAPVEGVQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D +++ + + FD + DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 50 T---DASQLKDKLSSEKFDAIFDNNGRELSDTQPLAEIFQDK-VQHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y++E+ + S RP Y+ G+ N D E WFFDRIVR
Sbjct: 106 QMPHIEGDAVDPKSRHKGKHETETYLTESGLPFTSIRPTYIYGAQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T HV+DL+S + L + N +A I+N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGMHITQFGHVKDLASAMALVLGNSQAVGQ-IYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
AAG ++I+HYDPK +KAFP R F
Sbjct: 225 AAGKSPDNLQIIHYDPKKFDFGKRKAFPMRVQHFF 259
>gi|423065819|ref|ZP_17054609.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
gi|406712577|gb|EKD07761.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
Length = 314
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
+K ++LI+ GG IG YL K L+ GH+V + G++ S P + +I
Sbjct: 2 DKMRILIM----GGTRFIGVYLTKILVSHGHDVVLFNRGNKPS------PVDGIKQI--H 49
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G +T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y
Sbjct: 50 GDRT---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYL 105
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDR
Sbjct: 106 KSDQMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLEAWFFDR 165
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IV KRP+PIPG+GM T + HV DL++ + +AV A ++N+ DR VT DG+AK
Sbjct: 166 IVAKRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKA 224
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++++HYDPK +KAFP R F
Sbjct: 225 CAIAAGQSPDDLQLIHYDPKNFDFGKRKAFPLRVQHF 261
>gi|434405569|ref|YP_007148454.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428259824|gb|AFZ25774.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 312
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 157/274 (57%), Gaps = 22/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL ++L+ +GHEV + G+ + P +I+ G +
Sbjct: 2 RILII----GGTRFIGVYLTQQLVEAGHEVVLFNRGNRPA-----PSLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D + + TFDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATVLKAKLAQETFDVIFDNNGRELTDTQPLAEIFQGR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P + H + E Y+++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 107 QLPHVEGDTVDPQSRHKGKHETEAYLTQQGLPFTSIRPTYIYGPRNYNELESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+ IPG+GM T + HV+DL+ +T V N +A I+N+ DR VT DG+A+ CA
Sbjct: 167 DRPLAIPGNGMHITQLGHVKDLAKAMTQVVGNKKAIGQ-IYNISGDRFVTFDGLARACAV 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG V+IVHYDPK +KAFP R F
Sbjct: 226 AAGKSPDAVKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|427724408|ref|YP_007071685.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
gi|427356128|gb|AFY38851.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
Length = 309
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 153/278 (55%), Gaps = 30/278 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL +GHEV + FNR N G
Sbjct: 2 RILII----GGTRFIGVYLTQILLEAGHEVVL---------------FNRGNHPAPEGVT 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD PA++ + G +FD V DNNG+ L +P+A+ + +K F+++SSAG+Y
Sbjct: 43 QIQGDRKDPAQLKEKLAGESFDAVFDNNGRELAHTQPLAE-IFAGKIKHFVYVSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P +PP E D V P++ H + E Y++ + W S RP Y+ GS N D E WFFDR
Sbjct: 102 PTTQPPLKEADAVDPNSRHKGKHETEAYLAASDLPWTSIRPTYIYGSKNYNDLEAWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PIPG+G T H DL++ + + N E A I+N+ DR VT G+AK
Sbjct: 162 IVRNRPIPIPGNGQFITQFGHCYDLATAMAAILGN-EKAIGQIYNISGDRFVTFTGLAKA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA+AAG VE+++YDP +KAFP R+ F+
Sbjct: 221 CAEAAGKNPDDVELIYYDPTEFSFGKRKAFPIRSQHFM 258
>gi|113478014|ref|YP_724075.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
gi|110169062|gb|ABG53602.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
Length = 310
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 154/278 (55%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEKGHEVVL---------------FNRGNKPAPVSGI 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K ++GD ++ + + FD + DNNG+ L +P+A+ K VK F+++SSAG+Y
Sbjct: 43 KEIYGDRTDINQLKEKLASEKFDAIFDNNGRKLSDTKPLAEIFKGQ-VKHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH+EGD + P + H+ + E ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHIEGDTIDPKSRHLGKYETETELANQGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ T + HV+DL +M + + + A I+N+ +R +T DG+A+
Sbjct: 162 RIVRDRPIPIPGNGLHITQLGHVKDL-AMAMVNILGNDKAIGQIYNISGERFITFDGLAR 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA+A G +++VHYDPK KKAFP R F
Sbjct: 221 SCAEATGKSPDSIKLVHYDPKKFDFGKKKAFPLRMQHF 258
>gi|209523545|ref|ZP_03272099.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
gi|209495950|gb|EDZ96251.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
Length = 311
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 155/274 (56%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GH+V + G++ S P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSHGHDVVLFNRGNKPS------PVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+PIPG+GM T + HV DL++ + +AV A ++N+ DR VT DG+AK CA
Sbjct: 166 KRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG ++++HYDPK +KAFP R F
Sbjct: 225 AAGQSPDDLQLIHYDPKNFDFGKRKAFPLRVQHF 258
>gi|75908322|ref|YP_322618.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75702047|gb|ABA21723.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
Length = 313
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 154/274 (56%), Gaps = 22/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPALQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDVV DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATQLKEKLSAENFDVVFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHIEGDKVDPKSRHKGKHETEAYLQQTGLPFTSIRPTYIYGPRNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ ++ + N +A ++N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPLPIPGNGLHITQLGHVKDLAMAMSQVIGNKQAIGQ-VYNISGDRYVTFDGLARACAQ 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G ++IVHYDPK +KAFP R F
Sbjct: 226 ALGKSADDIKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|411118862|ref|ZP_11391242.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710725|gb|EKQ68232.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
Length = 309
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 152/275 (55%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L HEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTRLLYEKEHEVVLFNRGN------KPTPVEGIAQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T +PA++ + G FD + DNNG+ L +P+A+ K VK F+++SSAG+Y +D
Sbjct: 50 T---NPADLKAKLEGQEFDAIFDNNGRELSDTQPLAELFKDQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y++E + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDPVDPESRHKGKHDTETYLAEQGLPFTSIRPTYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T HV+DL+ + + N A ++N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGMTITQFGHVKDLAQAMVQVLGNRRAVGQ-VYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
AAG ++IVHYDPK +KAFP R F
Sbjct: 225 AAGKSPDSLKIVHYDPKQFDFGKRKAFPMRVQHFF 259
>gi|354564877|ref|ZP_08984053.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
gi|353550003|gb|EHC19442.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
Length = 311
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 154/274 (56%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LIV GG IG YL + L+ GHEV + G+ + P +I G +
Sbjct: 2 RILIV----GGTRFIGVYLTQLLVQQGHEVVLFNRGN------RPLPVEGIGQI--TGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FD + DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 50 T---DATQLKEKLSKENFDAIFDNNGRELTDTQPLAEIFQDR-VQNFIYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDAVDPKSRHKGKHETEAYLIQQGIPFTSIRPTYIYGPKNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ +T + N +A I+N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGLHITQLGHVKDLATAMTKVLGNSQALRQ-IYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG ++IVHYDPK +KAFP R F
Sbjct: 225 AAGKSPDEIKIVHYDPKKFDFGKRKAFPLRIQHF 258
>gi|440681226|ref|YP_007156021.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
gi|428678345|gb|AFZ57111.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
Length = 310
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 158/274 (57%), Gaps = 24/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + G+ P +I+ G +
Sbjct: 2 RILVI----GGTRFIGVYLTQLLVEAGHEVVLFNRGN-------FPAPEAVGQII--GDR 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP+++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 49 T---DPSQLKAKLSQENFDVIFDNNGRELTDTQPLAEIF-AGRVQHFVYMSSAGVYLKSD 104
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ ++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 105 QMPHIEGDAVDPKSRHKGKHETEAYLQQSGIPFTSIRPTYIYGPKNYNELEGWFFDRIVR 164
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T + HV+DL+ ++ + N + A I+N+ DR VT DG+A+ CA
Sbjct: 165 DRPIPIPGNGMHLTQLGHVQDLAQAMSQVIGN-QKAIQQIYNISGDRFVTFDGLARACAV 223
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG V+IVHYDPK +KAFP R F
Sbjct: 224 AAGKSPDDVKIVHYDPKKFDFGKRKAFPMRVQHF 257
>gi|388499356|gb|AFK37744.1| unknown [Lotus japonicus]
Length = 377
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 180/333 (54%), Gaps = 19/333 (5%)
Query: 20 LAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLI 79
+A+ +P +LSFS L+S +S + L RR + SA+ KK+LI
Sbjct: 1 MARLVVPQQNQLSFSP---LASSLSDFSGTRLQTQIQFRRKAWQPKGFHVSASSTKKILI 57
Query: 80 VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVW 138
+ GG IG +L++ L+ GH+VT+ T G + ++ F++ S+ K +
Sbjct: 58 M----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDGDFSDF-SSKIKHLK 112
Query: 139 GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + V ++ FDVV D NG+ + V P+ + + ++QF++ SSAG+Y +D
Sbjct: 113 GDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPN--LEQFIYCSSAGVYLKSD 170
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
PH E D V P + H ++ E + NW S RP Y+ G N EEWFF R+
Sbjct: 171 LLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 230
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+ D+ VT DG+A+ CA+
Sbjct: 231 GRPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNIAGDKYVTFDGLARACAK 289
Query: 313 AAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
A G P EI+HY+PK KK FPFR+ F
Sbjct: 290 AGGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFF 322
>gi|186683636|ref|YP_001866832.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
gi|186466088|gb|ACC81889.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
Length = 312
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 157/274 (57%), Gaps = 22/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ + P +I+ G +
Sbjct: 2 RILIM----GGTRFIGIYLTQLLVEQGHEVVLFNRGNRAT-----PSLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP ++ + +FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DPTQLKAKLSQESFDVIFDNNGRELTDTQPLAEIFQGR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD+V P + H + E Y+++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 107 QLPHVEGDLVDPKSRHKGKHETEAYLTQLGLPFTSIRPTYIYGPRNYNELEGWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ +T + N +A I+N+ DR VT DG+A+ A
Sbjct: 167 DRPIPIPGNGLHITQLGHVKDLAKAMTQILGNKQAIGQ-IYNISGDRFVTFDGLARASAV 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG +IVHYDPK +KAFP R F
Sbjct: 226 AAGKSPDATKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|443325612|ref|ZP_21054298.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
gi|442794771|gb|ELS04172.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
Length = 312
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 147/269 (54%), Gaps = 27/269 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD--- 140
GG IG YL K L+ GHEV + FNR N+ G T + GD
Sbjct: 7 GGTRFIGVYLTKVLVAQGHEVVL---------------FNRGNKPAPVEGVTQIHGDRKD 51
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
A++ + G +FDVV DNNG+ L +P+ + + V+ F+++SSAG+Y +D+ PH
Sbjct: 52 AAQLKEKLSGESFDVVFDNNGRELSDTQPLVEIFQGK-VQHFVYVSSAGVYLKSDQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD V P + H Q E Y++ + W S RP Y+ G N D E WFFDRIVR+RP+
Sbjct: 111 EGDAVDPKSRHKGKHQTEAYLAASGIPWTSIRPTYIYGPQNYNDLEAWFFDRIVRERPIL 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G T + H++DL + V N E A I+N+ DR VT DG+A+ CA AAG
Sbjct: 171 IPGNGKHLTQLGHIQDLVKAMAAVVGN-EKAVGQIYNISGDRYVTFDGLARACAIAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
++I+HYDP +KAFP R F
Sbjct: 230 PEDIKIIHYDPSQFDFGKRKAFPMRVQHF 258
>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max]
gi|255647108|gb|ACU24022.1| unknown [Glycine max]
Length = 378
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 171/324 (52%), Gaps = 20/324 (6%)
Query: 30 RLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAV 89
+LSFS+ + SSL S + R+ + SA+ KK+LI+ GG
Sbjct: 11 QLSFSTLA--SSLSDFSGTRLQTQLQFKRKQCHPKGSFYVSASSTKKILIM----GGTRF 64
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNV 147
IG +L++ L+ GH+VT+ T G + ++ P ++ K + GD + V
Sbjct: 65 IGVFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDSDYADFSSKILHLKGDRKDFDFV 122
Query: 148 VGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
++ FDVV D NG+ D V P+ D + ++QF++ SSAG+Y +D PH E D
Sbjct: 123 KSSLSAEGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H ++ E + NW S RP Y+ G N EEWFF R+ RP+PIPGS
Sbjct: 181 VDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS 240
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G+Q T + HV+DL+ N E AS +FN+ D+ VT DG+A+ CA+A G P EI
Sbjct: 241 GIQITQLGHVKDLAKAFIQVFGN-EKASKEVFNISGDKHVTFDGLARACAKAGGFPEPEI 299
Query: 321 VHYDPKAAGIDAKKAFPFRNMVFI 344
+HY+PK KK+FPFR+ F
Sbjct: 300 IHYNPKDFDFGKKKSFPFRDQHFF 323
>gi|257059864|ref|YP_003137752.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
gi|256590030|gb|ACV00917.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
Length = 309
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 153/278 (55%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVYLTKVLVEQGHEVVL---------------FNRGNKPVPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + FD V DNNG+ L +P+ + + V+ F+++SSAG+Y
Sbjct: 43 QQIKGDRTNISQLKETLSSEQFDAVFDNNGRELSDTQPLVEIFLNK-VEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ FT HV+DL+ + + N +A + I+N+ +R VT DG+A
Sbjct: 162 RIVRNRPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAINQ-IYNISGERYVTFDGLAY 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++IVHYDPK KKAFP R F
Sbjct: 221 ACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHF 258
>gi|388520007|gb|AFK48065.1| unknown [Lotus japonicus]
Length = 377
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 176/332 (53%), Gaps = 17/332 (5%)
Query: 20 LAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLI 79
+A+ +P +LSFS L+S +S + L RR + SA+ KK+LI
Sbjct: 1 MARLVVPQQNQLSFSP---LASSLSDFSGTRLQTQIQFRRKAWQPKGFHVSASSTKKILI 57
Query: 80 VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG 139
+ GG IG +L++ L+ GH+VT+ T G + + S+ K + G
Sbjct: 58 M----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDFSDFSSKIKHLKG 113
Query: 140 DPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
D + V ++ FDVV D NG+ + V P+ + + ++QF++ SSAG+Y +D
Sbjct: 114 DRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPN--LEQFIYCSSAGVYLKSDL 171
Query: 197 PPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
PH E D V P + H ++ E + NW S RP Y+ G N EEWFF R+
Sbjct: 172 LPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAG 231
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+ D+ VT DG+A+ CA+A
Sbjct: 232 RPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNIAGDKYVTFDGLARACAKA 290
Query: 314 AGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
G P EI+HY+PK KK FPFR+ F
Sbjct: 291 GGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFF 322
>gi|119512443|ref|ZP_01631525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
gi|119462909|gb|EAW43864.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
Length = 312
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 153/279 (54%), Gaps = 32/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--G 133
++LI+ GG IG YL + L+ GHEV + FNR N V G
Sbjct: 2 RILIM----GGTRFIGVYLTQLLVEQGHEVVL---------------FNRGNRPVPHLPG 42
Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ GD ++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+
Sbjct: 43 VGQIIGDRTNATQLKEKLSSEKFDVIFDNNGRELTDTQPLAEIFQDQ-VQHFVYMSSAGV 101
Query: 191 YKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PH+EGD V P + H + E Y+ + S RP Y+ G N D E WFF
Sbjct: 102 YLKSDQLPHIEGDTVDPKSRHRGKHETEAYLMQQNLPVTSIRPTYIYGPQNYNDLESWFF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPG+G+ T + HV+DL++ ++ + N +A I+N+ DR VT DG+A
Sbjct: 162 DRIVRDRPIPIPGNGLHITQLGHVKDLATAMSQVIGNSQAIRQ-IYNISGDRFVTFDGLA 220
Query: 308 KLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+ CA AAG V+IVHYDPK +KAFP R F
Sbjct: 221 RACAVAAGKSPDAVKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ KK+LI+ GG IG +L+++L+ GH+VT+ T G + ++ P +
Sbjct: 49 SASSTKKILIM----GGTRFIGVFLSRQLVKEGHQVTLFTRG--KAPITQQLPGESDTDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D + ++QF++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPN--LEQFIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+ D+ V
Sbjct: 221 VEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNISGDKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+A+ CA+A G P EI+HY+PK KK+FPFR+ F
Sbjct: 280 TFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFF 323
>gi|282898032|ref|ZP_06306027.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
gi|281197176|gb|EFA72077.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
Length = 314
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 155/274 (56%), Gaps = 25/274 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + G+ P N +++ G +
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKAGHEVVLFNRGNH-------PTPNGVGQVI--GDR 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP+++ + +FDV+ DNNG+ L P+A + VK F+++SSAG+Y +D
Sbjct: 49 T---DPSQLSKL-SQESFDVIFDNNGRELTDTEPLAKMFQGR-VKHFIYMSSAGVYLKSD 103
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD + P + H + E ++ + + S RP Y+ G N E WFFDRIVR
Sbjct: 104 QLPHVEGDTIDPKSRHRGKHETESFLQQLGIPFTSIRPTYIYGPKNYNPLESWFFDRIVR 163
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ + + N + A I+N+ DR VT DG+A+ CA
Sbjct: 164 DRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAVGKIYNVSGDRFVTFDGLARACAI 222
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
AAG V+IVHYDPK +KAFP R F
Sbjct: 223 AAGKSGESVKIVHYDPKKFDFGKRKAFPMRAQHF 256
>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Glycine max]
Length = 378
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 171/324 (52%), Gaps = 20/324 (6%)
Query: 30 RLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAV 89
+LSFS + SSL S + R+ + SA+ KK+LI+ GG
Sbjct: 11 QLSFSPLA--SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIM----GGTRF 64
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNV 147
IG +L++ L+ GH+VT+ T G + ++ P N+ K + GD + V
Sbjct: 65 IGVFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFV 122
Query: 148 VGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
++ FDVV D NG+ D V P+ D + ++QF++ SSAG+Y +D PH E D
Sbjct: 123 KSSLSAEGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H ++ E + NW S RP Y+ G N EEWFF R+ RP+PIP S
Sbjct: 181 VDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSS 240
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G+Q T + HV+DL++ + N E AS +FN+ ++ VT DG+A+ CA+A G P EI
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGN-EKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEI 299
Query: 321 VHYDPKAAGIDAKKAFPFRNMVFI 344
+HY+PK KK+FPFR+ F
Sbjct: 300 IHYNPKDFDFGKKKSFPFRDQHFF 323
>gi|414076098|ref|YP_006995416.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
gi|413969514|gb|AFW93603.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
Length = 310
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 151/277 (54%), Gaps = 30/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ GHEV + FNR N AG
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKDGHEVVL---------------FNRGNHAAPAGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD ++ + +FDVV DNNG+ L +P+A+ + VK F+++SSAG+Y
Sbjct: 43 QIIGDRTNSTQLQEKLAPESFDVVFDNNGRELTDTQPLAEIFQGR-VKHFVYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD V P + H + E Y+ + + S RP Y+ G N E WFFDR
Sbjct: 102 KSDQMPHLEGDAVDPKSRHQGKHETEAYLKQLGIPFTSIRPTYIYGPQNYNPLESWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+ IPG+GM T + HV DL+ +T + N +A I+N+ DR VT DG+A+
Sbjct: 162 IVRDRPICIPGNGMHITQLGHVWDLAQAMTQIIGNDQAIGQ-IYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG V+IVHYDPK +KAFP R F
Sbjct: 221 CAVAAGKSADDVKIVHYDPKKFDFGKRKAFPMRVQHF 257
>gi|218246823|ref|YP_002372194.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
gi|218167301|gb|ACK66038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
Length = 309
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 152/278 (54%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVYLTKVLVEQGHEVVL---------------FNRGNKPVPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + FD V DNNG+ L +P+ + + V+ F+++SSAG+Y
Sbjct: 43 QQIKGDRTNISQLKETLSSEQFDAVFDNNGRELSDTQPLVEIFLNK-VEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR P+PIPG+G+ FT HV+DL+ + + N +A + I+N+ +R VT DG+A
Sbjct: 162 RIVRDHPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAINQ-IYNISGERYVTFDGLAY 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++IVHYDPK KKAFP R F
Sbjct: 221 ACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHF 258
>gi|300868027|ref|ZP_07112665.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
gi|300333947|emb|CBN57843.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
Length = 312
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 150/266 (56%), Gaps = 20/266 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTVWGDPAE 143
GG IG YL K L+ GHEV + G KKP P + +I G +T D ++
Sbjct: 7 GGTRFIGVYLTKILVAQGHEVVLFNRG-------KKPAPVDGVQQI--HGDRT---DASQ 54
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ + FD + DNNG+ L +P+A+ K+ VK F+++SSAG+Y +D+ PH+EGD
Sbjct: 55 LKEKLSSEKFDAIFDNNGRELSDTQPLAEIFKNQ-VKHFVYMSSAGVYLKSDQLPHIEGD 113
Query: 204 VVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG 260
P + H+ + E Y+ + W S RP Y+ G N D E WFFDRIVR RP+PIPG
Sbjct: 114 ATDPKSRHLGKYETETYLKDAGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPG 173
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPV 318
+GM T + H +DL+ + + N E A I+N+ DR VT DG+A+ CA AAG +
Sbjct: 174 NGMHITQLGHCQDLAKAMAAVLGN-EKAIGQIYNVSGDRYVTFDGLARACAAAAGKSTDI 232
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMVFI 344
+IVHYDPK +KAFP R F
Sbjct: 233 KIVHYDPKKFDFGKRKAFPMRVQHFF 258
>gi|67922306|ref|ZP_00515819.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
gi|67855882|gb|EAM51128.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
Length = 311
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 149/274 (54%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL KEL+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKKGHEVVLFNRGN------KPAPIEGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D ++ + +F+ + DNNG+ L +P+ + K +K F+++SSAG+Y +
Sbjct: 50 K---DATQLKEKLASESFEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVYLKSG 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y+ ++ W S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDEVDPNSRHKGKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIP +G+ T H++DL + + + N E A I+N+ +R VT DG+AK CA
Sbjct: 166 NRPIPIPSNGLHITQFGHIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAKACAV 224
Query: 313 AAGLPVE---IVHYDPKAAGIDAKKAFPFRNMVF 343
AAG + I+HYDPK KKAFP R F
Sbjct: 225 AAGKSADDLNIIHYDPKQFDFGKKKAFPLRIQHF 258
>gi|119487296|ref|ZP_01621047.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
gi|119455851|gb|EAW36986.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
Length = 310
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 149/274 (54%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ K P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGN------KPAPVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FD + DNNG+ L +P+AD K VK F+++SSAG+Y +
Sbjct: 50 T---DADQIKEKLANENFDAIFDNNGRQLSDTQPLADLFKGK-VKHFVYMSSAGVYLKSP 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
E PH+EGD P + H+ + E Y+ E W S RP Y+ G N E WFFDRIV
Sbjct: 106 EMPHIEGDKTDPKSRHLGKYETETYLQEQQLPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ + +AV E A ++N+ +R VT DG+A CA
Sbjct: 166 NRPIPIPGNGLHITQLGHVKDLANAM-VAVLGNENAIGQVYNISGERYVTFDGLAGACAV 224
Query: 313 AAGLPVE---IVHYDPKAAGIDAKKAFPFRNMVF 343
AAG E IVHYDPK KK FP R F
Sbjct: 225 AAGKSAEDLNIVHYDPKQFDFGKKKPFPLRLQHF 258
>gi|254422655|ref|ZP_05036373.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
gi|196190144|gb|EDX85108.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
Length = 309
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 154/274 (56%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GG IG YL ++L+ GH VT++ G+ + P + IV +
Sbjct: 2 RVLVI----GGTRFIGVYLTRQLVKQGHAVTLLNRGNHPA------PVDEVETIVC--DR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP + + +FD + DNNG+ L +P+AD K +K +++SSAG+Y +D
Sbjct: 50 T---DPEALKQALSDQSFDAIFDNNGRELAHTKPLADLFKGK-LKHLVYVSSAGVYAKSD 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P++ H E Y+ E + + RP Y+ G N E+WFFDR+VR
Sbjct: 106 QMPHVEGDRVDPNSRHKGKFHTEDYLREQGIPFTAIRPVYIYGPQNYNPLEKWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSGM T++ H +DL++ + + N + A I+N+ D+AVT DG+A+ CA
Sbjct: 166 DRPIPIPGSGMALTHLGHCQDLAAAMVSVLGN-DNAVGEIYNISGDKAVTFDGLARACAI 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A V+IVHY+PK KKAFP R F
Sbjct: 225 AMEKDPDAVKIVHYNPKDFDFGKKKAFPMRVQHF 258
>gi|427717348|ref|YP_007065342.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
gi|427349784|gb|AFY32508.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
Length = 312
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 155/279 (55%), Gaps = 32/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--G 133
++LI+ GG IG YL + L+ GH+V + FNR N V + G
Sbjct: 2 RILIM----GGTRFIGVYLTQRLVEQGHQVVL---------------FNRGNRAVPSLQG 42
Query: 134 GKTVWGDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + GD + + ++ FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+
Sbjct: 43 VEQIIGDRTDATQLKAKLSQENFDVIFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGV 101
Query: 191 YKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PHVEGD V P + H + E Y+ + + S RP Y+ G N + E WFF
Sbjct: 102 YLKSDQLPHVEGDPVDPKSRHRGKHETEAYLFSSRLPFTSIRPTYIYGPLNYNELESWFF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIV RP+PIPG+G+ T + HV+DL++ ++ V N +A I+N+ DR VT DG+A
Sbjct: 162 DRIVHDRPIPIPGNGLHLTQLGHVKDLAAAMSQIVGNQQAI-GQIYNISGDRFVTFDGLA 220
Query: 308 KLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+ C QA G ++IVHYDPK +KAFP R F
Sbjct: 221 RACVQATGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|282899647|ref|ZP_06307611.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
gi|281195526|gb|EFA70459.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
Length = 307
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 150/276 (54%), Gaps = 29/276 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + FNR N G
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKAGHEVVL---------------FNRGNHPAPDGVG 42
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD + + + +FDV+ DNNG+ L P+A + VK F+++SSAG+Y
Sbjct: 43 QIIGDRTDPSQLSKLSQESFDVIFDNNGRELTDTEPLAKMFQGR-VKHFVYMSSAGVYLK 101
Query: 194 ADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+D+ PHVEGD V P + H + E ++ + + S RP Y+ G N E WFFDRI
Sbjct: 102 SDQLPHVEGDTVDPKSRHRGKHETESFLQQLGIAFTSIRPTYIYGPKNYNPLESWFFDRI 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
VR RP+PIPG+G+ T + HV+DL+ + + N + A I+N+ DR VT DG+A+ C
Sbjct: 162 VRDRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAIGKIYNVSGDRFVTFDGLARAC 220
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A AAG V+IVHYDPK +KAFP R F
Sbjct: 221 AIAAGKSADSVKIVHYDPKKFDFGKRKAFPMRAQHF 256
>gi|416389981|ref|ZP_11685430.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357264136|gb|EHJ13062.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 311
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 148/274 (54%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL KEL+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKQGHEVVLFNRGN------KPAPIEGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D ++ + F+ + DNNG+ L +P+ + K +K F+++SSAG+Y +
Sbjct: 50 K---DATQLKEKLASENFEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVYLKSG 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y+ ++ W S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDEVDPNSRHKGKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIP +G+ T H++DL + + + N E A I+N+ +R VT DG+AK CA
Sbjct: 166 NRPIPIPSNGLHITQFGHIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAKACAV 224
Query: 313 AAGLPVE---IVHYDPKAAGIDAKKAFPFRNMVF 343
AAG + I+HYDPK KKAFP R F
Sbjct: 225 AAGKSADDLNIIHYDPKQFDFGKKKAFPLRIQHF 258
>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ KK+LI+ GG IG +L+++L+ GH+VT+ T G + ++ P +
Sbjct: 49 SASSTKKILIM----GGTRFIGVFLSRQLVKEGHQVTLFTRG--KAPITQQLPGESDTDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D + ++QF++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPN--LEQFIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+ D+ V
Sbjct: 221 VEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNISGDKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+A+ C +A G P EI+HY+PK KK+FPFR+ F
Sbjct: 280 TFDGLARACVKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFF 323
>gi|17232323|ref|NP_488871.1| mRNA-binding protein [Nostoc sp. PCC 7120]
gi|17133968|dbj|BAB76530.1| mRNA-binding protein [Nostoc sp. PCC 7120]
Length = 311
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 22/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPALQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDVV DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATQLKEKLSAENFDVVFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHIEGDKVDPKSRHKGKHETEAYLQQIGLPFTSIRPTYIYGPRNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIP +G+ T + HV+DL+ ++ + N +A ++N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPLPIPVNGLHITQLGHVKDLAMAMSQVIGNKQAIGQ-VYNISGDRYVTFDGLARACAQ 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G ++IVHYDPK +KAFP R F
Sbjct: 226 ALGKSADDLKIVHYDPKKFDFGKRKAFPMRVQHF 259
>gi|307150534|ref|YP_003885918.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
gi|306980762|gb|ADN12643.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
Length = 311
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 157/278 (56%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG +L K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVFLTKILVKQGHEVVL---------------FNRGNKPVPIEGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + FD + DNNG+ L+ +P+A+ K ++ F+++SSAG+Y
Sbjct: 43 EQIHGDRQDPVQLKEKLANQKFDAIFDNNGRELNDTQPLAEIFKDQ-IQHFIYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ +D+ PH+EGD V P++ H + E Y+++ W S RP Y+ G N D E WFFD
Sbjct: 102 QKSDQMPHIEGDPVDPNSRHKGKFETEDYLAKAGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+ IPG+G+ T + HV+DL++ + + N +A I+N+ +R VT DG+AK
Sbjct: 162 RLVRDRPILIPGNGLHITQLGHVQDLAAAMAAVLGNDQAIGQ-IYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G ++++HY+PK +K+FP R F
Sbjct: 221 ACAVAVGKSPDEIKLLHYNPKKFDFGKRKSFPLRVQHF 258
>gi|298491512|ref|YP_003721689.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
gi|298233430|gb|ADI64566.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
Length = 310
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 150/277 (54%), Gaps = 30/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ GHEV + FNR N V G
Sbjct: 2 RILVI----GGTRFIGVYLTQLLVEVGHEVVL---------------FNRGNHPVPDGVG 42
Query: 136 TVWGDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD + + + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y
Sbjct: 43 QIIGDRTDSTQLTEKLAQEEFDVIFDNNGRELADTKPLAEIFQGR-VQHFVYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD + P + H + E Y+ + + S RP Y+ G N E WFFDR
Sbjct: 102 KSDQMPHMEGDTLDPKSRHKGKHETEAYLQQLGIPFTSIRPTYIYGPQNYNPLESWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PI G+GM T + HV+DL+ +T + N E I+N+ DR VT DG+A+
Sbjct: 162 IVRDRPIPIAGNGMHITQLGHVKDLAKAMTQVISN-ETVVRQIYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG ++IVHYDPK +KAFP R F
Sbjct: 221 CAVAAGKSADHIKIVHYDPKKFDFGKRKAFPMRVQHF 257
>gi|168024677|ref|XP_001764862.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683898|gb|EDQ70304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 43 VSISPSSFLACPASSRRSSVSAFTVKASA---AEKKKVLIVNTNSGGHAVIGFYLAKELL 99
V +S SS R+S V+ASA +E K +L++ GG IG +LA+EL+
Sbjct: 57 VQVSKSSLDVGVFKEGRTSSRRAVVRASADSGSESKNILMM----GGTRFIGLFLARELV 112
Query: 100 GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVV 156
+GH+VT+ T G + + S+ K + GD + + + G F++V
Sbjct: 113 KAGHQVTLFTRGKAPITQQLPGESDEEYAEYSSKVKHLQGDRQDFDGLKEKLKGTNFNIV 172
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQ 213
D NG+ V P+ + G++Q++F SSAG+Y +D+ PH E D V P + H +
Sbjct: 173 YDINGREGKEVEPILEAL--PGLEQYIFCSSAGVYLKSDQLPHFEVDAVDPKSRHKGKLD 230
Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
E + W S RP Y+ G N EEWFF R+ RP+P+P SGMQ T + HV+D
Sbjct: 231 TETLLQSKGVAWTSIRPVYIYGPLNYNPVEEWFFQRLKEGRPIPVPNSGMQITQLGHVKD 290
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDA 332
L+ L + N E A I+N+ + VT DG+AK CA A G P +IVHY+PK
Sbjct: 291 LARAFVLVLAN-EKAYGQIYNISGAKYVTFDGIAKACALAGGFPEPQIVHYNPKDFDFGK 349
Query: 333 KKAFPFRNMVFI 344
KKAFP R+ F
Sbjct: 350 KKAFPLRDQHFF 361
>gi|434391359|ref|YP_007126306.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
gi|428263200|gb|AFZ29146.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
Length = 314
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 148/270 (54%), Gaps = 27/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDPAE 143
GG IG YL ++L+ GHEV + FNR N + AG + GD
Sbjct: 7 GGTRFIGVYLTRKLVAQGHEVVL---------------FNRGNRPLPVAGVAQITGDRTH 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
++ + FDV+ DNNG+ L +P+A+ K V+ F+++SSAG+Y P+D+ PH
Sbjct: 52 ADDLKEKLSSQNFDVIFDNNGRELSDTQPLAEIFKDR-VQHFVYMSSAGVYLPSDQMPHQ 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD V P + H + E ++++ + + RP Y+ G N + E WFFDRIVR RP+P
Sbjct: 111 EGDAVDPKSRHRGKHETEAFLAQLGIPFTAIRPTYIYGPQNYNELESWFFDRIVRDRPMP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G+ T HV DL+ + + + +A I+N+ DR VT DG+A+ CA AAG
Sbjct: 171 IPGNGLHITQFGHVDDLAQAMCQVLGSAQAVGE-IYNVSGDRYVTFDGLARACAVAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+EIVHYDPK +KAFP R F
Sbjct: 230 PEALEIVHYDPKKFDFGKRKAFPMRVQHFF 259
>gi|225450527|ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera]
gi|147773479|emb|CAN73432.1| hypothetical protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product [Vitis vinifera]
Length = 378
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 156/285 (54%), Gaps = 14/285 (4%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
+ +A+ +KK+L++ GG IG +LA+ L+ GH+VT+ T G + ++
Sbjct: 46 LHVTASGEKKILMM----GGTRFIGVFLARLLVKEGHQVTLFTRGKAAITQQLPGESDKD 101
Query: 127 NEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
S+ + GD + V + FDVV D NG+ + P+ D + ++Q++
Sbjct: 102 YAEFSSKVLHLKGDRKDFEFVKTSLAAEGFDVVYDINGREAVEIEPILDALPN--LQQYI 159
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+YK +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 160 YCSSAGVYKKSDLLPHCETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYN 219
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+PIP SG+Q T + HV+DL+ L + N E AS +FN+ ++
Sbjct: 220 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFLLVLSN-EKASKQVFNISGEKY 278
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
VT DG+A+ CA+ AG P EIVHY+PK KKAFPFR+ F
Sbjct: 279 VTFDGLARACAKGAGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|443315917|ref|ZP_21045385.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
gi|442784490|gb|ELR94362.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
Length = 311
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 143/266 (53%), Gaps = 19/266 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL + L+ GHEV ++ G+ K P + +I T A V
Sbjct: 7 GGTRFIGVYLTRLLVEQGHEVVLLNRGN------KPAPVSGVAQIHCDRKDTTALKTALV 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G FD + DNNG+ +P+ + V+ +++SSAG+Y +D+ PHVEGD
Sbjct: 61 GQ-----NFDAIFDNNGREQSDTQPLVELFGDQ-VQHLIYVSSAGVYLKSDQMPHVEGDA 114
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P++ H + E Y++ + + RP Y+ G N D E WFFDR+VR RP+PIPG
Sbjct: 115 VDPNSRHKGKFETEAYLAAQGVPFTAIRPVYIYGPQNYNDLEAWFFDRLVRDRPIPIPGD 174
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPV 318
GM T + HV+DL++ + + NP A +N+ DRAVT DG+A+ CA AAG +
Sbjct: 175 GMALTQLGHVQDLAAAMAAVLSNPRAVGQT-YNISGDRAVTFDGLARACAIAAGKDPQAL 233
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMVFI 344
++VHYDPK +KAFP R F
Sbjct: 234 DLVHYDPKQFDFGKRKAFPMRVQHFF 259
>gi|218439709|ref|YP_002378038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
gi|218172437|gb|ACK71170.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
Length = 311
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 152/279 (54%), Gaps = 31/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
+VL++ GG IG YL K L+ GH+V + FNR N+ V G
Sbjct: 2 RVLVM----GGTRFIGVYLTKVLVKQGHDVVL---------------FNRGNKPVPIEGI 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD ++ + + FD + DNNG+ L +P+A+ K ++ F+++SSAG+Y
Sbjct: 43 EQIHGDRQDSTQLKDKLASEKFDAIFDNNGRELTDTQPLAEIFKDH-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ D+ PH EGD V P++ H + E Y+++ W S RP Y+ G N D E WFFD
Sbjct: 102 QKTDQMPHREGDPVDPNSRHKGKFETEDYLAKTGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+ IP G T + HV DL++ + + NP+A I+N+ DR VT DG+AK
Sbjct: 162 RIVRDRPILIPAHGSYITQLGHVHDLATAMAAVLNNPKAIGQ-IYNVSGDRYVTFDGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA AAG ++++HY+PK +K+FP R F
Sbjct: 221 ACAIAAGKSPDEIKLLHYNPKQFDFGKRKSFPLRTQHFF 259
>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ LAV E AS IFN+ ++ +
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LAVLGNEKASREIFNISGEKYI 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+A+ CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 280 TFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|218186738|gb|EEC69165.1| hypothetical protein OsI_38123 [Oryza sativa Indica Group]
Length = 373
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 165/309 (53%), Gaps = 21/309 (6%)
Query: 48 SSFLACPASSRRSSVSAFTVK---ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE 104
S+ L+ +RR S + A+AA+ K +L++ GG IG +L++ L+ GH+
Sbjct: 22 SAALSISTQARRRSWQPRGARMQVAAAADSKNILVM----GGTRFIGVFLSRLLVKEGHQ 77
Query: 105 VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDN 159
VT+ T G + ++ P E K + GD + V + FDVV D
Sbjct: 78 VTLFTRG--KAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSLAAKGFDVVYDI 135
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEK 216
NG+ V P+ D ++Q+++ SSAG+Y +D PH E D V P + H ++ E
Sbjct: 136 NGREAVEVAPILD--ALPNLEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETES 193
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
+ NW S RP Y+ G N EEWFF R+ RP+P+PG+G Q T + HV+DL++
Sbjct: 194 LLETRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLAT 253
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKA 335
LA+ NP+ AS +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKA
Sbjct: 254 AFVLALGNPK-ASKQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKA 312
Query: 336 FPFRNMVFI 344
FPFR+ F
Sbjct: 313 FPFRDQHFF 321
>gi|434397935|ref|YP_007131939.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
gi|428269032|gb|AFZ34973.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
Length = 311
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 150/275 (54%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVQQGHEVVLFNRGN------KPAPIEGVQQI--QGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D A + +G +FD V DNNG+ L +P+ + K V+ F+++SSAG+Y ++
Sbjct: 50 K---DTALLKEKLGQTSFDAVFDNNGRELSDTQPLVEIFKDR-VQHFVYVSSAGVYLKSE 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD V P++ H + E Y++++ W S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHREGDPVDPNSRHKGKHETEAYLAQSGIPWTSIRPTYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R + IPG+G+ T HV DL++ + + N +A I+N+ DR VT +G+A CA+
Sbjct: 166 NRSILIPGNGLYLTQFGHVEDLATAMAAVLGNQQAVGQ-IYNISGDRYVTFNGLAYACAE 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
AAG +++VHYDP +KAFP R F
Sbjct: 225 AAGKSADEIQLVHYDPSKFNFGKRKAFPMRTQHFF 259
>gi|428208069|ref|YP_007092422.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428009990|gb|AFY88553.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 309
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 151/278 (54%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + FNR N + G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVAQGHEVVL---------------FNRGNRPIPVEGI 42
Query: 136 T-VWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
T + GD P ++ + FD + DNNG+ L +P+A+ V+ F+++SSAG+Y
Sbjct: 43 TQIQGDRTSPEQLKAKLSQEHFDAIYDNNGRELSDTQPLAEIFHDR-VQHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PHVEGD V P + H + E Y+++ + + RP Y+ G+ N D E WFFD
Sbjct: 102 LRSDQMPHVEGDPVDPKSRHRGKYETEAYLAQVGLPFTAIRPTYIYGASNYNDLESWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIP +G+ T + HV DL+ + + N E A ++N+ DR VT DG+A+
Sbjct: 162 RIVRDRPIPIPANGLHITQMGHVEDLAQAMARVLGN-ERAIGQVYNVSGDRYVTFDGLAR 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMVF 343
CA AAG E IVHY+PK +KAFP R F
Sbjct: 221 ACAVAAGKSPEELAIVHYEPKNFDFGKRKAFPLRIQHF 258
>gi|115488340|ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|108862567|gb|ABA97622.2| RNA binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113649164|dbj|BAF29676.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|222616978|gb|EEE53110.1| hypothetical protein OsJ_35887 [Oryza sativa Japonica Group]
Length = 376
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 166/309 (53%), Gaps = 21/309 (6%)
Query: 48 SSFLACPASSRRSSVSAFTVK---ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE 104
S+ L+ +RR S + A+AA+ K +L++ GG IG +L++ L+ GH+
Sbjct: 22 SAALSISTQARRRSWQPRGARMQVAAAADSKNILVM----GGTRFIGVFLSRLLVKEGHQ 77
Query: 105 VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDN 159
VT+ T G + ++ P E K + GD + V + FDVV D
Sbjct: 78 VTLFTRG--KAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSLAAKGFDVVYDI 135
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEK 216
NG+ V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H ++ E
Sbjct: 136 NGREAVEVAPILDALPN--LEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETES 193
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
+ NW S RP Y+ G N EEWFF R+ RP+P+PG+G Q T + HV+DL++
Sbjct: 194 LLETRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLAT 253
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKA 335
LA+ NP+ AS +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKA
Sbjct: 254 AFVLALGNPK-ASKQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKA 312
Query: 336 FPFRNMVFI 344
FPFR+ F
Sbjct: 313 FPFRDQHFF 321
>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ +A+ K +LI+ GG IG +L++ L+ GH+VT+ T G +
Sbjct: 39 RRVWQAKGALQVTASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPI 92
Query: 118 MKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVAD 172
+K P + K + GD + V ++ FDVV D NG+ D V P+ D
Sbjct: 93 TQKLPGESDQDYADFSSKVLHLKGDRKDFDFVKSSLSAKGFDVVYDINGREADEVAPILD 152
Query: 173 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFR 229
+ ++QF++ SSAG+Y +D PH E D V P + H ++ E + + NW S R
Sbjct: 153 ALPN--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESSGVNWTSIR 210
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
P Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS
Sbjct: 211 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFIQVLGN-EKAS 269
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
+FN+ ++ VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 270 KQVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 325
>gi|428211961|ref|YP_007085105.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
gi|428000342|gb|AFY81185.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
Length = 306
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 143/264 (54%), Gaps = 17/264 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL K L+ GH V + G+ K P +I G +T D +++
Sbjct: 3 GGTRFIGVYLTKILVEQGHSVVLFNRGN------KPAPVEGVEQI--HGDRT---DESQL 51
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ FD + DNNG+ L +P+AD K VK F+++SSAG+Y +D+ PH E D
Sbjct: 52 KEKLASEQFDAIFDNNGRELSDTKPLADLFKGK-VKHFVYMSSAGVYLKSDQMPHREEDA 110
Query: 205 VKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H E Y+S+ + S RP Y+ G N E WFFDRIVR RP+PIPG+
Sbjct: 111 VDPKSRHKGKNDTEIYLSQQGLPFTSIRPTYIYGPQNYNPLEGWFFDRIVRDRPIPIPGN 170
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEI 320
G T + H DL++ + + N E A I+N+ DR VT DG+A+ CA+AAG V++
Sbjct: 171 GFHITQLGHCYDLANAMAAVLGN-ETAIGQIYNISGDRYVTFDGLARACAEAAGKADVKL 229
Query: 321 VHYDPKAAGIDAKKAFPFRNMVFI 344
+HYDPK +KAFP R F
Sbjct: 230 IHYDPKQFDFGKRKAFPMRVQHFF 253
>gi|56752277|ref|YP_172978.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300635|ref|YP_400843.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
gi|56687236|dbj|BAD80458.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169516|gb|ABB57856.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 155/279 (55%), Gaps = 33/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG L ++LL +GH VT+ FNR + AG +
Sbjct: 2 RILVI----GGSRFIGVALVRQLLAAGHAVTV---------------FNRGSRPALAGVE 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY 191
+ GD PA + + G +FDVV DN G+ +A A A G +Q +++SSAG+Y
Sbjct: 43 QLVGDRQDPAALAQL-QGRSFDVVFDNTGR--EAAETQALVASLDGQFQQLIYVSSAGVY 99
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ P E D V P + H + E ++ + + +FRP Y+ G GN E+WFFD
Sbjct: 100 AASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGPGNYNPLEQWFFD 159
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI+R RP+PIPG+G+ T + HV DL++ + AV+NP A I+NL DR V+ DG+A+
Sbjct: 160 RILRDRPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLSGDRYVSFDGLAR 218
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA AAG + +VHYDPK + +KAFP R FI
Sbjct: 219 ACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFI 257
>gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 156/287 (54%), Gaps = 18/287 (6%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
+ SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P
Sbjct: 46 LHVSASSEKKILIM----GGTRFIGVFLSRLLVKGGHQVTLFTRG--KSPIAKQLPGESD 99
Query: 127 NEIVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ K + GD + V ++ FDVV D NG+ + V P+ D ++Q
Sbjct: 100 QDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPK--LEQ 157
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGN 238
+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 158 YIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLN 217
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
EEWFF R+ RP+P+P SG+Q + + HV+DL + L V E AS IFN+ +
Sbjct: 218 YNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLGTAF-LNVLGNEKASREIFNISGE 276
Query: 299 RAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
+ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 277 KYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|443313431|ref|ZP_21043042.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
gi|442776374|gb|ELR86656.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
Length = 312
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 152/274 (55%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L +GHEV + G+ + P + +I+ G +
Sbjct: 2 RILII----GGTRFIGVYLTKLLAATGHEVVLFNRGNHPA------PVSGIEQII--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
TV E+ + FD + DNNG+ L +PVA+ + V+ F+++SSAG+Y PA
Sbjct: 50 TV---ADEITQKLSSQHFDAIFDNNGRELADTQPVAELF-AHKVQHFIYMSSAGVYLPAM 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
E PH EGD V P + H + E Y+++ + S RP Y+ G N E WFFDR++R
Sbjct: 106 ELPHGEGDAVDPKSRHKGKHETEAYLTKLGIPFTSIRPTYIYGPQNYNQLESWFFDRLIR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSG+ T + HV DL++ + V + A I+N+ DR VT D +A+ CA
Sbjct: 166 DRPIPIPGSGVHLTQLGHVEDLAAAMA-QVLGCKRAIGQIYNVSGDRYVTFDNLARACAV 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G V+IVHY+PK+ +KAFPFR F
Sbjct: 225 AMGKSPENVKIVHYEPKSFDFGKRKAFPFRLQHF 258
>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana]
gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs
gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934
and gb|T46767 come from this gene [Arabidopsis thaliana]
gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]
Length = 378
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 156/284 (54%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|428299906|ref|YP_007138212.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
gi|428236450|gb|AFZ02240.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
Length = 312
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 144/265 (54%), Gaps = 27/265 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAE 143
GG IG YL K L+ GHEV + FNR N V G + + GD
Sbjct: 7 GGTRFIGVYLTKLLVEQGHEVVL---------------FNRGNRPVPVEGVRQIKGDRTN 51
Query: 144 VGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
++ + FD V DNNG+ L +P+A+ + S V+ F+++SSAG+Y +D+ PH
Sbjct: 52 SESLKAALANEKFDAVFDNNGRELTDTQPLAEIFQDS-VQHFVYMSSAGVYLKSDQMPHY 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D V P + H + E ++ + + S RP Y+ G N D E WFFDRIVR RP+P
Sbjct: 111 EEDAVDPKSRHKGKHETESFLMQQDIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRNRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
IPG+GM T HV+DL+ + + N +A ++N+ +R VT DG+A+ CA AAG
Sbjct: 171 IPGNGMHITQFGHVQDLAQTMCRVLGN-SSAVRQVYNVSDNRFVTFDGLARACAVAAGKA 229
Query: 318 ---VEIVHYDPKAAGIDAKKAFPFR 339
++IVHYDPK +KAFP R
Sbjct: 230 PEDIQIVHYDPKKFDFGKRKAFPMR 254
>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 156/284 (54%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 45 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 98
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 99 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 156
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 157 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 216
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 217 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 275
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 276 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 319
>gi|212722236|ref|NP_001131905.1| uncharacterized protein LOC100193292 [Zea mays]
gi|194692874|gb|ACF80521.1| unknown [Zea mays]
gi|413941839|gb|AFW74488.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954163|gb|AFW86812.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 374
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 171/322 (53%), Gaps = 27/322 (8%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
+ S +S ++ VSIS + +R S A ++AA+ K +L++ GG IG
Sbjct: 16 TISDFSGAAAAVSIS---------TQKRRSRGARVQVSAAADSKNILVM----GGTRFIG 62
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P E K + GD + V
Sbjct: 63 VFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQDFEFVKT 120
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 206
+ +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH E D V
Sbjct: 121 SLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPHCEVDAVD 178
Query: 207 PDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIPG+G
Sbjct: 179 PKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAGN 238
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+VH
Sbjct: 239 QITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGFPEPELVH 297
Query: 323 YDPKAAGIDAKKAFPFRNMVFI 344
Y+PK KKAFPFR+ F
Sbjct: 298 YNPKEFDFGKKKAFPFRDQHFF 319
>gi|332708749|ref|ZP_08428720.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352291|gb|EGJ31860.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 312
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 150/275 (54%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG +G YL K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFVGVYLTKVLVEMGHEVVLFNRGN------KPAPLPGVQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
DP ++ ++ FD + DNN + L +P+ + K V+ F+++SSAG+Y ++
Sbjct: 50 K---DPNQLKEMLSSQEFDGIFDNNARELSDTQPLVEIFKDR-VQHFVYMSSAGVYLKSE 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y+ E + + RP Y+ G N D E WFFDRIVR
Sbjct: 106 QLPHLEGDPVDPNSRHKGKHHTEAYLQELGVPFTAIRPTYIYGPQNYNDVEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG+GM T + H +DL+ + + NPEA I+N+ +R VT DG+A+ CA
Sbjct: 166 DRTIPIPGNGMHITQLGHCQDLARAMAAVLGNPEAIGK-IYNVSGERYVTFDGLARTCAM 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A G V++VHYDPK +KAFPFR F
Sbjct: 225 ACGKSASEVKLVHYDPKQFDFGKRKAFPFRLQHFF 259
>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 14/294 (4%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G +
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQ 93
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
++ S+ + GD + V + FDVV D NG+ V P+ D
Sbjct: 94 QLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPILDAL 153
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQ 231
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP
Sbjct: 154 PK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPV 211
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS
Sbjct: 212 YIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKASQQ 270
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
+FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ F
Sbjct: 271 VFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFF 324
>gi|449457309|ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
Length = 383
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 170/322 (52%), Gaps = 19/322 (5%)
Query: 33 FSSYSHL-SSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
F+S+S L SSL + + A R+ + +A+ KK +LI+ GG IG
Sbjct: 15 FTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM----GGTRFIG 70
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P + K + GD + V +
Sbjct: 71 IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 128
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 206
+ FDVV D NG+ D V P+ D ++QF++ SSAG+Y +D PH E D V
Sbjct: 129 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 186
Query: 207 PDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIP SG+
Sbjct: 187 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 246
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
Q T + HV+DL++ + N + AS +FN+ ++ V+ DG+AK CA+A G P EIVH
Sbjct: 247 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 305
Query: 323 YDPKAAGIDAKKAFPFRNMVFI 344
Y+PK KK FPFR+ F
Sbjct: 306 YNPKEFDFGKKKPFPFRDQHFF 327
>gi|242085078|ref|XP_002442964.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
gi|241943657|gb|EES16802.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
Length = 384
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 21/307 (6%)
Query: 51 LACPASSRRSSVSAFTVK-----ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEV 105
++ A RRSS + A+AA+ K +L++ GG IG +L++ L+ GH+V
Sbjct: 27 ISVSAQKRRSSWQPRGARVQVSAAAAADSKNILVM----GGTRFIGVFLSRILVKEGHQV 82
Query: 106 TIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNG 161
T+ T G + ++ + E S+ + + GD + V + +DVV D NG
Sbjct: 83 TLFTRGKAPITQQLPGESDAEYAEF-SSKVQHLKGDRQDFEFVKTSLAAKGYDVVYDING 141
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYI 218
+ V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H ++ E +
Sbjct: 142 REAVQVEPIIDALPN--LEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLL 199
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+ NW S RP Y+ G N EEWFF R+ RP+PIPG+G Q T + HV+DL+
Sbjct: 200 TSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAF 259
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFP 337
L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+VHY+PK KKAFP
Sbjct: 260 NLVLGNPK-ASQQIFNISGAKYVTFDGLARACAKAGGFPEPELVHYNPKDFDFGKKKAFP 318
Query: 338 FRNMVFI 344
FR+ F
Sbjct: 319 FRDQHFF 325
>gi|302801426|ref|XP_002982469.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
gi|300149568|gb|EFJ16222.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
Length = 371
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 158/302 (52%), Gaps = 17/302 (5%)
Query: 53 CPASSRRSSVSAFTVKAS--AAEK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
C RR KAS A E+ KK+L++ GG IG YLA+ L+ +GHEV++ T
Sbjct: 20 CRNPWRRRPQGVVNTKASLGAPERAKKILMM----GGSRFIGVYLARTLVKAGHEVSLFT 75
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDA 166
G + N K + GD + + + +G F+VV D NG+
Sbjct: 76 RGKTPITQQLAGESNEAYAEYQLRVKHIQGDRQDFEALKSKIGEAGFEVVYDINGREAAE 135
Query: 167 VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFS 223
V P+ D ++Q+++ SSAG+Y +D PH E D V P + H + E + +
Sbjct: 136 VEPIVDALPD--LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGV 193
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
W S RP Y+ G N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++
Sbjct: 194 TWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMD 253
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMV 342
NP+A + +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKAFP R+
Sbjct: 254 NPKAF-NQVFNISGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQH 312
Query: 343 FI 344
F
Sbjct: 313 FF 314
>gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 155/284 (54%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKFDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|166367389|ref|YP_001659662.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
gi|166089762|dbj|BAG04470.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
Length = 313
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 149/278 (53%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|428226603|ref|YP_007110700.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
gi|427986504|gb|AFY67648.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
Length = 311
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 156/279 (55%), Gaps = 31/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
++LI+ GG IG YL + L+ GHEV + FNR N+ AG
Sbjct: 2 RILIM----GGTRFIGVYLTRILVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + G + + G +FD V DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 QQIQGDRTDAGQLKEKLAGESFDAVFDNNGRELSDTQPLVEIFQDR-LQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ +D+ PHVEGD V P + H + E Y++ + S RP Y+ G N E WFFD
Sbjct: 102 QKSDQMPHVEGDAVDPKSRHRGKFETEDYLATQGVPFTSIRPVYIYGPQNYNPLESWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RPVPIPG+G T + HV+DL+ + + N +A I+N+ DRAVT DG+A+
Sbjct: 162 RIVRDRPVPIPGNGAHLTQLGHVQDLAKAMAAVLGNSQAI-GQIYNISGDRAVTFDGLAR 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA AAG +++VHYDPKA +KAFP R F
Sbjct: 221 ACAAAAGKDPGTLDLVHYDPKAFDFGKRKAFPMRVQHFF 259
>gi|307104182|gb|EFN52437.1| hypothetical protein CHLNCDRAFT_138964 [Chlorella variabilis]
Length = 324
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 155/300 (51%), Gaps = 47/300 (15%)
Query: 49 SFLACPAS--SRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
+FL AS R S SA A + K LIVNT GGHA +G +LAK+LL +GH VT
Sbjct: 9 TFLGAAASLQGRTSRQSASRRLAVSVRADKALIVNTKGGGHAFLGLHLAKKLLSAGHSVT 68
Query: 107 IMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD 165
I+ GD+ +K+ K PF+++ + AG + VWG P + G FDVV DNNGKNL+
Sbjct: 69 ILNDGDK--EKLSGKAPFSQYASL--AGAEVVWGSPTDPATYPAG-AFDVVYDNNGKNLE 123
Query: 166 AVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENFSN 224
+ +P+ D K VK ++F+SSAG Y EP HVEGD K AGHV VE Y+ E
Sbjct: 124 SCQPLIDHFKGK-VKHYVFVSSAGAYAANSVEPMHVEGDKRKASAGHVAVEGYLEEQQLP 182
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ F+P Y+ G KDCE+WF +RI+R
Sbjct: 183 YTVFQPLYIYGPHTAKDCEQWFMERILR-------------------------------- 210
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
FNL SDR +T DG+ K A AA +IVHY+P G+ + FPFR + F
Sbjct: 211 -----CGHFNLCSDRCITFDGIVKAIAAAASKEAKIVHYNPAEMGLGKGEGFPFRAVHFF 265
>gi|302798457|ref|XP_002980988.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
gi|300151042|gb|EFJ17689.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
Length = 371
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 158/302 (52%), Gaps = 17/302 (5%)
Query: 53 CPASSRRSSVSAFTVKAS--AAEK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
C R T KAS A E+ KK+L++ GG IG YLA+ L+ +GHEV++ T
Sbjct: 20 CRNPWHRRPQGVVTTKASLGAPERAKKILMM----GGSRFIGVYLARTLVKAGHEVSLFT 75
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDA 166
G + N K + GD + + + +G F+VV D NG+
Sbjct: 76 RGKTPITQQLAGESNEAYAEYQLRVKHIQGDRQDFEALKSKIGEAGFEVVYDINGREAAE 135
Query: 167 VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFS 223
V P+ D ++Q+++ SSAG+Y +D PH E D V P + H + E + +
Sbjct: 136 VEPIVDALPD--LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGV 193
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
W S RP Y+ G N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++
Sbjct: 194 TWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMD 253
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMV 342
NP+A + +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKAFP R+
Sbjct: 254 NPKAF-NQVFNISGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQH 312
Query: 343 FI 344
F
Sbjct: 313 FF 314
>gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E+WFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEKWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
Length = 380
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 157/297 (52%), Gaps = 20/297 (6%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKA---P 90
Query: 118 MKKP-PFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+ +P P + K + GD + V + FDVV D NG+ V P+
Sbjct: 91 ITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPIL 150
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASF 228
D ++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S
Sbjct: 151 DALPK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSI 208
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E A
Sbjct: 209 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKA 267
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
S +FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ F
Sbjct: 268 SQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFF 324
>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa]
gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 157/297 (52%), Gaps = 20/297 (6%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKA---P 90
Query: 118 MKKP-PFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+ +P P + K + GD + V + FDVV D NG+ V P+
Sbjct: 91 ITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPIL 150
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASF 228
D ++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S
Sbjct: 151 DALPK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSI 208
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E A
Sbjct: 209 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKA 267
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
S +FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ F
Sbjct: 268 SQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFF 324
>gi|357150725|ref|XP_003575555.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Brachypodium distachyon]
Length = 695
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 158/285 (55%), Gaps = 18/285 (6%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
A+AA+ K +L++ GG IG ++++ L+ GH+VT+ T G + ++ P E
Sbjct: 48 AAAADSKNILVM----GGTRFIGVFMSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDAE 101
Query: 129 IVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
K + GD + V ++ FDVV D NG+ V P+ + + ++QF+
Sbjct: 102 YAEFSSKVLHLKGDRQDFDFVKTNLSAKGFDVVYDINGREATEVAPILEALPN--LEQFI 159
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+Y +D PH E D V P + H ++ E + ++ NW S RP Y+ G N
Sbjct: 160 YCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLEKSGVNWTSIRPVYIYGPLNYN 219
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+PIPG+G Q T + HV+DL++ + NP AAS ++N+ +
Sbjct: 220 PVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLATAFIKVLGNP-AASKQVYNISGTKY 278
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
VT DG+A+ CA+A G P EI+HY+PK KKAFPFR+ F
Sbjct: 279 VTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFF 323
>gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 155/284 (54%), Gaps = 18/284 (6%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
T DG+A CA+A G P EIVHY+PK KKAFPFR+ F
Sbjct: 280 TFDGLAXACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323
>gi|16330056|ref|NP_440784.1| hypothetical protein slr1540 [Synechocystis sp. PCC 6803]
gi|383321799|ref|YP_005382652.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324968|ref|YP_005385821.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490852|ref|YP_005408528.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436119|ref|YP_005650843.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|451814215|ref|YP_007450667.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
gi|1652543|dbj|BAA17464.1| slr1540 [Synechocystis sp. PCC 6803]
gi|339273151|dbj|BAK49638.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|359271118|dbj|BAL28637.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274288|dbj|BAL31806.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277458|dbj|BAL34975.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957953|dbj|BAM51193.1| hypothetical protein BEST7613_2262 [Synechocystis sp. PCC 6803]
gi|451780184|gb|AGF51153.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
Length = 311
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 151/275 (54%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG +L + L+ GHEV + G+ + P N +I G +
Sbjct: 2 RILIM----GGTRFIGIHLCRVLVAQGHEVVLFNRGN------RPDPVNGVAQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
V ++ + FDV+ DNNG+ L +P+ D V+QF+++SSAG+Y+ +
Sbjct: 50 RV---AEQLREKLEKEEFDVIFDNNGRELSDTQPLVDLYNGR-VQQFVYMSSAGVYQASS 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D V P + H + E+Y++++ W + RP Y+ G N E WFFDR+VR
Sbjct: 106 QMPHRETDAVDPQSRHKGKFETERYLAQSGIPWTAIRPTYIYGPHNYNALESWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG+G T + HV DL+ + + P AA I+N+ DR VT++G+A+ CA
Sbjct: 166 GRAIPIPGNGQYITQLGHVEDLAIAMAKTIVTP-AAIGQIYNISGDRYVTMNGLAQACAT 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
AAGL V++VHYDPK +KAFP R F
Sbjct: 225 AAGLDPQGVKLVHYDPKDFDFGKRKAFPLRQQHFF 259
>gi|428768541|ref|YP_007160331.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
gi|428682820|gb|AFZ52287.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
Length = 310
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 150/275 (54%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ K P N +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVAQGHEVVLFNRGN------KPAPVNGIEQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T + +E+ + + G FD + DNNG+ L +P+ + K + F+++SSAG+Y P++
Sbjct: 50 T---NASELKDKLAGQKFDAIFDNNGRELKDTKPLVELFKDQ-ISHFVYVSSAGVYLPSE 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D V P + H + E Y+ + S RP Y+ GSGN D E WFFDRI+R
Sbjct: 106 QMPHREDDPVDPQSRHKGKYETETYLKAEGVPFTSIRPTYIYGSGNYNDLEAWFFDRILR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+P+ IP G+ FT HV DL++ ++L + N +A I+N+ DR VT G+A CA+
Sbjct: 166 NQPILIPYHGLHFTQFGHVEDLATAMSLVLGNSQAVGQ-IYNISGDRYVTFKGLALACAE 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A G +EI +YDP ++ +KAFP R F
Sbjct: 225 AVGKNPEEIEIKYYDPAQFNLEKRKAFPIRVQHFF 259
>gi|425470091|ref|ZP_18848968.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880027|emb|CCI39175.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 311
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 148/274 (54%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + ++ F+++SSAG+Y +D
Sbjct: 50 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVE-IFGDRIQHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 106 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 166 NRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G +EIV+Y+PK KK FP R F
Sbjct: 225 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|443658986|ref|ZP_21132269.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
gi|159027807|emb|CAO87020.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332818|gb|ELS47406.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
Length = 311
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 149/278 (53%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + +F+ + DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLQEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IRHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|422304038|ref|ZP_16391387.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790931|emb|CCI13248.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 311
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 148/278 (53%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLKEKLKNEDFEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|116786922|gb|ABK24300.1| unknown [Picea sitchensis]
Length = 407
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 47 PSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
P F S + T +S+ KK+LI+ GG IG YL++ L+ +GHEVT
Sbjct: 54 PQQFQTNKLSYKSRGRVEITASSSSVPPKKILIM----GGTRFIGVYLSRLLVKAGHEVT 109
Query: 107 IMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGK 162
+ T G + K+ + E S+ + GD + + + FDVV D NG+
Sbjct: 110 LFTRGKSPVTQKLAGETDQEYAEF-SSKVLHIKGDRQDFEFLKTKLSASGFDVVYDINGR 168
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYIS 219
V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H + E ++
Sbjct: 169 EAVEVEPILDALPN--IEQYIYCSSAGVYLKSDILPHFETDAVDPKSRHKGKLNTENLLT 226
Query: 220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
NW S RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+
Sbjct: 227 TRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPKSGLQMTQLGHVKDLARAFL 286
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPF 338
+ + N E AS ++N+ + VT G+AK CA+AAG P +IVHY+PK KK+FP
Sbjct: 287 MVLGN-EKASKQVYNISGAKYVTFSGLAKACAKAAGFPEPDIVHYNPKEFDFGKKKSFPL 345
Query: 339 RNMVFI 344
R+ F
Sbjct: 346 RDQHFF 351
>gi|425440472|ref|ZP_18820772.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719093|emb|CCH97032.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 314
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 147/274 (53%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 53 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRER-IGHFVYVSSAGVYLKSD 108
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 109 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 168
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 169 NRPIPIPGHGEHFTQFGHVVDLARAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 227
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G +EIV+Y+PK KK FP R F
Sbjct: 228 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 261
>gi|443321884|ref|ZP_21050923.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
gi|442788428|gb|ELR98122.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
Length = 311
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 147/278 (52%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ +GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEAGHEVVL---------------FNRGNKPTPLPGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K + GD P + + G FD + DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 KQITGDRLQPEVLKEKLAGEHFDAIFDNNGRELADTQPLVELFQGK-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
P + PH EGD + P + H + E Y++E W S RP Y+ G N D E WFFD
Sbjct: 102 LPTHQLPHREGDAIDPQSRHRGKYETEAYLTEMGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG+G+ T HV DL++ + + N +A I+N+ DR VT DG+A
Sbjct: 162 RLVRDRPLPIPGNGLHLTQFGHVADLATAMASVLGNHKAI-GQIYNISGDRYVTFDGLAY 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G + +VHY+P+ KAFP R F
Sbjct: 221 ACAAALGKSPDSLSLVHYNPRDFDFGKSKAFPLRVQHF 258
>gi|427734696|ref|YP_007054240.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
gi|427369737|gb|AFY53693.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
Length = 312
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 149/274 (54%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GH+V + G+ + P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQLLVEQGHDVVLFNRGN------RPLPVENVTQII--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDV+ DNNG+ L +P+AD ++ ++ F+++SSAG+Y +D
Sbjct: 50 T---DSKQLQEKLKNENFDVIFDNNGRELTDTQPLADIFQNR-LQHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
PHVEGD V + H E ++ + S RP Y+ G N D E WFFDRI R
Sbjct: 106 SLPHVEGDAVDEKSRHKGKHHTESFLEVRDFPFTSIRPTYIYGPQNYNDLEAWFFDRITR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ +T + N A I+N+ +R VT DG+A+ CA
Sbjct: 166 NRPLPIPGNGLHITQLGHVKDLAKAMTQVIGNSNAIKQ-IYNVSGNRYVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G ++IVHYDPK +KAFP R F
Sbjct: 225 AVGKSADDIQIVHYDPKKFDFGKRKAFPMRMQHF 258
>gi|449016344|dbj|BAM79746.1| similar to mRNA binding protein CSP41 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 414
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 19/300 (6%)
Query: 57 SRRSSVSA---FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
SRR+S+S + +A K+ L++ GG G YLAK L GHEV + G +
Sbjct: 68 SRRASLSMKLPMSCRADTIGSKRCLVI----GGTRFSGVYLAKVLGDLGHEVVLYNRGSK 123
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
++ P F +A T+ GD P EV + FD + D NG+ L+ RP
Sbjct: 124 PLQRVPNEPEGEF-AARAAMSSTIIGDRTKPDEVKEKLASENFDAIFDMNGRELEDTRPF 182
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWAS 227
A+ + + ++++SSAG+Y + PH+EGD P + H+ Q E+++ + W +
Sbjct: 183 AELF-AGKIDHYVYMSSAGVYLQSPVLPHIEGDACDPKSRHLGKLQTEEFLDSHGLPWTA 241
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP Y+ G N EEWFF RI RP+PIPG G T + HV DL++ + NP A
Sbjct: 242 IRPTYIYGPSNYNPIEEWFFARIAEDRPIPIPGDGTYMTGLGHVADLANAFAAVLGNPRA 301
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
++N+ ++VT +G+AK+CA A G + IVHYDP I KAFPFR F
Sbjct: 302 V-GKVYNIQDRKSVTYNGIAKMCALAMGRDPESIRIVHYDPNRVDIGKAKAFPFRLQHFF 360
>gi|427420133|ref|ZP_18910316.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762846|gb|EKV03699.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 300
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 143/264 (54%), Gaps = 18/264 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL + LL +GH VT++ G+ P E+V K+ P ++
Sbjct: 2 GGTRFIGVYLTRLLLAAGHRVTLLNRGNR--------PAPDGVEVVRCDRKS----PEDL 49
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ G TFD + DNNG+ L +P+ + + V+QF+++SSAG+Y +++ PHVEGD
Sbjct: 50 KAALAGKTFDAIYDNNGRELGDTQPLVELFGGT-VQQFIYVSSAGVYLKSEQMPHVEGDP 108
Query: 205 VKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H E Y+ E + + RP Y+ G N E+WFFDRI RP+PIPG+
Sbjct: 109 VDPSSRHKGKHHTEDYLIEQGVPFTAIRPVYIYGPQNYNPLEKWFFDRISHDRPLPIPGN 168
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G T + H DL+ + + NP+A ++N+ +R VT DG+A CA+A G PV +I
Sbjct: 169 GKAITQLGHCEDLAQAMVSVLGNPKAI-GQVYNISGERYVTFDGLAHACAEAMGKPVPDI 227
Query: 321 VHYDPKAAGIDAKKAFPFRNMVFI 344
HYDP +KAFP R F
Sbjct: 228 RHYDPSQFDFGKRKAFPMRVQHFF 251
>gi|425463625|ref|ZP_18842955.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830819|emb|CCI26921.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 316
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 146/274 (53%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 53 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRER-IGHFVYVSSAGVYLKSD 108
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 109 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 168
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK C
Sbjct: 169 NRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACTA 227
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G +EIV+Y+PK KK FP R F
Sbjct: 228 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 261
>gi|452822421|gb|EME29440.1| mRNA binding / poly(U) binding protein [Galdieria sulphuraria]
Length = 383
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 158/271 (58%), Gaps = 8/271 (2%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
+I+NT SGGHA +G+YLA LL +VT+ G E + +P F+ ++E+ + G T
Sbjct: 61 IILNTKSGGHAFVGYYLAHALLQQKQVQVTLWNEGSEAQLRSSQP-FSHYSELKTLGINT 119
Query: 137 VWGDPAEVGNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
++G A ++ G V D ++DN K+++ +P+ + A GV+ +LF+SSAGIYK ++
Sbjct: 120 IFGQSA-TESLEGKVRKCDWIIDNFSKDVETTKPLVELASQIGVRHYLFVSSAGIYKASE 178
Query: 196 EPPHVEGDVVKPDAGHVQVEKY-ISENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRK 253
PH E D V DA Q E++ +S+ FRP Y+IG + K ++FFDRI+R
Sbjct: 179 MTPHFENDPVNSDAAISQTERFLLSQTSFAVTCFRPIYLIGLKSAKTSYTDYFFDRIIRG 238
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
VPIP G Q +++HV DL M+ L+++ +A IFN S + +T+ +A+LC+Q
Sbjct: 239 LKVPIPYPGDQLVSLSHVDDLVQMIILSIDKSDAF-QEIFNATSGKFITVRALAELCSQV 297
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
P++ +YD A ++ FPFRN FI
Sbjct: 298 CCKPLQTFYYDAGLAS-NSFSRFPFRNRHFI 327
>gi|425437767|ref|ZP_18818182.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389677230|emb|CCH93825.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 311
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 148/278 (53%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + +F+ + DNNG+ L +P+ + S ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPGQLKEKLKNESFEAIFDNNGRELSDTQPLVEIF-SDRIEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|413941840|gb|AFW74489.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954162|gb|AFW86811.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 375
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 171/323 (52%), Gaps = 28/323 (8%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
+ S +S ++ VSIS + +R S A ++AA+ K +L++ GG IG
Sbjct: 16 TISDFSGAAAAVSIS---------TQKRRSRGARVQVSAAADSKNILVM----GGTRFIG 62
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P E K + GD + V
Sbjct: 63 VFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQDFEFVKT 120
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-DVV 205
+ +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH E D V
Sbjct: 121 SLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPHCEVVDAV 178
Query: 206 KPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIPG+G
Sbjct: 179 DPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAG 238
Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIV 321
Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+V
Sbjct: 239 NQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGFPEPELV 297
Query: 322 HYDPKAAGIDAKKAFPFRNMVFI 344
HY+PK KKAFPFR+ F
Sbjct: 298 HYNPKEFDFGKKKAFPFRDQHFF 320
>gi|326531332|dbj|BAK05017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
A+AA+ K +LI+ GG IG +L+++L+ GH+VT+ T G + ++ P E
Sbjct: 39 AAAADSKNILIM----GGTRFIGLFLSRKLVQEGHQVTLFTRG--KAPITQQLPGESDAE 92
Query: 129 IVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
K + GD + V + F+VV D NG+ V P+ + + ++QF+
Sbjct: 93 YAEFSSKVLHLKGDRKDFDFVKTSLSAKGFNVVYDINGREATEVSPILEALPN--LEQFI 150
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+Y +D PH E D V P + H ++ E + + NW S RP Y+ G N
Sbjct: 151 YCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLETSGVNWTSIRPVYIYGPLNYN 210
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+PIP +G Q T + HV+DL++ + NP+ AS ++N+ +
Sbjct: 211 PVEEWFFHRLKAGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPK-ASKQVYNISGSKY 269
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
VT DG+A+ CA+A G P EI+HY+PK KKAFPFR+ F
Sbjct: 270 VTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFF 314
>gi|158337073|ref|YP_001518248.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
gi|158307314|gb|ABW28931.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
Length = 312
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 144/270 (53%), Gaps = 27/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAE 143
GG IG YL++ L+ GH+V + FNR N + G T + GD +
Sbjct: 7 GGTRFIGIYLSRILVDQGHDVVL---------------FNRGNHAPAVAGLTQIQGDRTD 51
Query: 144 VGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ + FD + DNNG+ L +P+A K V+ F+++SSAG+Y +++ PH
Sbjct: 52 AAQLKAKLAHEKFDAIFDNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D P++ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+P
Sbjct: 111 EDDPTDPNSRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG
Sbjct: 171 IPGNGQHMTQLGHVQDLAQAMASVLGNPQAIGQ-IYNISGDRYVTFDGIAKACALAAGQS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+ +VHYDP +KAFP R F
Sbjct: 230 SDALRLVHYDPAQFDFGKRKAFPMRLQHFF 259
>gi|425460465|ref|ZP_18839946.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826828|emb|CCI22356.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 311
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 147/278 (52%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPRQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|425450332|ref|ZP_18830162.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389768887|emb|CCI06125.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 311
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 147/278 (52%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPGQLKEKLENESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|359460634|ref|ZP_09249197.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
sp. CCMEE 5410]
Length = 312
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 145/270 (53%), Gaps = 27/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD--- 140
GG IG YL++ L GH+V + FNR N + G T + GD
Sbjct: 7 GGTRFIGIYLSQILADQGHDVVL---------------FNRGNHAPAVAGLTQIQGDRTD 51
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
A++ + + FD + DNNG+ L +P+A K V+ F+++SSAG+Y +++ PH
Sbjct: 52 AAQLKSKLAHEKFDAIFDNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D P++ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+P
Sbjct: 111 EDDPTDPNSRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG
Sbjct: 171 IPGNGQHMTQLGHVQDLAQAMASVLGNPQAI-GQIYNISGDRYVTFDGIAKACALAAGQS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+ +VHYDP +KAFP R F
Sbjct: 230 PDALRLVHYDPAQFDFGKRKAFPMRLQHFF 259
>gi|390439289|ref|ZP_10227696.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389837320|emb|CCI31820.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 314
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 147/278 (52%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 45
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y
Sbjct: 46 RQIHGDRTDPAQLKEKLKNESFEAIFDNNGRELRDTQPLVEIFGDR-IGHFVYVSSAGVY 104
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFD
Sbjct: 105 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFD 164
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIP G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 165 RLVRNRPIPIPSHGEHFTQFGHVVDLARAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 223
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 224 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 261
>gi|440754856|ref|ZP_20934058.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
gi|440175062|gb|ELP54431.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
Length = 306
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 142/269 (52%), Gaps = 27/269 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD--- 140
GG IG L K L+ GHEV + FNR N+ AG + + GD
Sbjct: 2 GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGVRQIHGDRTD 46
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
P ++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y +D+ PH
Sbjct: 47 PGQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSDQMPHK 105
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD + P + H + E Y+SE W S RP Y+ G N D E WFFDR+VR RP+P
Sbjct: 106 EGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIP 165
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA A G
Sbjct: 166 IPGHGEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKN 224
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+EIV+Y+PK KK FP R F
Sbjct: 225 AEEIEIVNYNPKKFDFGKKKPFPLRVQHF 253
>gi|428781551|ref|YP_007173337.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
gi|428695830|gb|AFZ51980.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
Length = 311
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
K+LI+ GG IG L K L+ GH++T+ FNR N G
Sbjct: 2 KILIM----GGTRFIGVALTKILVEQGHKITL---------------FNRGNNPSPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
KT+ GD + + + TFD + DNNG+ L +P+ + K ++ F+++SSAG+Y
Sbjct: 43 KTINGDRKDADQLKEKLATETFDAIFDNNGRELSDTQPLVELFKDK-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH E D + P + H E Y+SE W S RP Y+ G+GN D E WFFD
Sbjct: 102 LKSDQMPHYEADAIDPKSRHKGKHDTETYLSEMGMPWTSVRPVYIYGAGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR R VPIPG G T ++HV+DL+ + + N A ++N+ +R VT +G+A+
Sbjct: 162 RIVRDRAVPIPGHGEHITQLSHVQDLAYAMASILGNKNAIGQ-VYNISGERYVTFNGIAR 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA+A G +++VHY+PK KK FP R F
Sbjct: 221 ACAKAIGKSPDDLKLVHYNPKDFDFGKKKPFPLRMQHF 258
>gi|449017271|dbj|BAM80673.1| similar to mRNA-binding protein [Cyanidioschyzon merolae strain
10D]
Length = 429
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 156/286 (54%), Gaps = 20/286 (6%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEI 129
+ +IVN SGGHA IG YLA++LL EV ++ G E+ + K+P R E
Sbjct: 75 RSAAIIVNPPSGGHASIGLYLARQLLSLDLEVYLLVAGQEDKYRSKQPNSALLGLREAEP 134
Query: 130 VSAGGKTVWGD---PAEVGNVV-----GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+A +GD P+ + N+V +DN + LD + +A ++
Sbjct: 135 HAASFHISFGDADDPSILMNMVQTRRPSAGPIAAFIDNRSQTLDEALLLHKFAMGLNAER 194
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE-KYISENFSNWASFRPQYMIGSGNNK 240
+L++SS GIY+P D P +E D V+ AG QVE +++ ++ +A+FRP Y+IG K
Sbjct: 195 YLYVSSCGIYEPGDYAPFIETDQVRQSAGQAQVESRFLRDSVIPFAAFRPMYIIGKHAAK 254
Query: 241 -DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV-ENPEAASSNIFNLVSD 298
D +F DRI RKRP+P+PG G F ++ H D++SML AV P+ S +FN VS
Sbjct: 255 LDYTNFFLDRITRKRPIPLPGKGNAFVSLTHAEDVASMLACAVLARPDEVSGQVFNAVSP 314
Query: 299 RAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKA--FPFR 339
R VTL G+A++C + EI++YDP GID K+A PFR
Sbjct: 315 RYVTLKGLAEMCHRVVHGDKSKPEIIYYDPVKLGIDPKEATGLPFR 360
>gi|254413469|ref|ZP_05027239.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
gi|196179576|gb|EDX74570.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
Length = 311
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 147/279 (52%), Gaps = 31/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEQGHEVVL---------------FNRGNKPAPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + G FD + DNNG+ L +P+ + K V+ F+++SSAG+Y
Sbjct: 43 QQIHGDRKDATQLKEKLSGEAFDAIFDNNGRELSDTQPLVEIFKDK-VQHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PHVEGD V P + H + E Y+ + + RP Y+ G N D E WFFD
Sbjct: 102 LQSDQMPHVEGDPVDPKSRHKGKHETEAYLQAQGIPFTAIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+ IP SG+ T + H +DL+ ++L + N +A ++N+ DR VT DG+A
Sbjct: 162 RIVRDRPLLIPSSGLYITQLGHCKDLARAMSLVLGNQQAI-GQVYNVSGDRYVTFDGLAN 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMVFI 344
C AAG E ++HY+PK +KAFP R F
Sbjct: 221 ACIVAAGKSPEDFDLLHYNPKKFDFGKRKAFPLRTQHFF 259
>gi|299117075|emb|CBN73846.1| mRNA binding protein [Ectocarpus siliculosus]
Length = 333
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 154/275 (56%), Gaps = 11/275 (4%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGG 134
K LI GGH +G++LA +L+ VT++ G +N D PF + ++ S G
Sbjct: 5 KALIAQNKGGGHGELGYHLALKLIEKDISVTLLQDGAGKNKDSQ---PFASYGDLESKGA 61
Query: 135 KTVWGDPAE-VGNVV-GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
VWGD +E VG ++ G +FD V DN K++D + +AD +K+ GVK + ++SS G+YK
Sbjct: 62 TIVWGDFSEGVGKLIPEGESFDYVFDNYAKDVDTCKDLADCSKAWGVKNYAYVSSGGMYK 121
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIV 251
+DE P E VK ++G QVEKY+++ W SFRPQY+ G NK D +WFFDR+V
Sbjct: 122 DSDEVPFTESSDVK-ESGQRQVEKYVADLGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVV 180
Query: 252 RKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+P+P G Q + H D++SML V N E A +FN SDR +T +G+ +
Sbjct: 181 HGLEFIPLPLHGDQLVALTHAEDVASMLASVVGN-ERAVKQVFNCASDRYITYNGLFREV 239
Query: 311 AQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMVFI 344
+ A V + Y + D KK FPFRN F+
Sbjct: 240 GKVAKPAVSKMAYYYEPRDYDLKKGWFPFRNNHFV 274
>gi|159464355|ref|XP_001690407.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|34398360|gb|AAO22242.1| 38 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
gi|158279907|gb|EDP05666.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 401
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 155/283 (54%), Gaps = 21/283 (7%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPP--FNRFNE 128
E KK+L++ GG IG YLA++L+ GH+VT+ T G + S+ P F F+
Sbjct: 57 ESKKILLM----GGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSR 112
Query: 129 IVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
V K + GD EV + F VV D NG+ V PV KS+ ++Q+++
Sbjct: 113 KV----KHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKST-LEQYIYC 167
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
SSAG+Y D PH E D V P + H + E+ + ++ N+ S RP Y+ G N
Sbjct: 168 SSAGVYLKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPV 227
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFF R+ RP+P+PGSG Q T + HV+DLS+ + N +AA ++N+ +R VT
Sbjct: 228 EEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAA-RQVYNISGERFVT 286
Query: 303 LDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
DG+AK CA+A G+P E++HY+ K KAFP R+ F
Sbjct: 287 FDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFF 329
>gi|428218511|ref|YP_007102976.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
gi|427990293|gb|AFY70548.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 147/274 (53%), Gaps = 31/274 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAE 143
GG +G L + L+ GHEV + FNR N A G K + GD +
Sbjct: 2 GGTRFVGVALTQNLISLGHEVVL---------------FNRGNRPAPAAGVKMIQGDRKD 46
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ + + G +FD + DN+G+ L +P+ D + ++ F+++SSAG+Y+ ++ P+
Sbjct: 47 IQQLKEKLSGQSFDAIFDNSGRELSDTKPIVDMFRDR-IRHFIYMSSAGVYQESETLPYF 105
Query: 201 EGDVVKPDAGH---VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E D P++ H + E Y+ + +S + S RP Y+ G GN D E WFFDRIVR
Sbjct: 106 EEDPTNPESRHKGKLHTEAYLKKLYSAEGFPFTSIRPTYIYGPGNYNDVEAWFFDRIVRD 165
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPVPIPG+G T + HV DL++ + ++ P+ I+N+ R VT G+AKLCAQA
Sbjct: 166 RPVPIPGNGQFITQLGHVEDLAAAMAAVLKQPKTYGE-IYNISDIRYVTYSGIAKLCAQA 224
Query: 314 AGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
G ++ V+Y+PK KKAFPFR F
Sbjct: 225 IGKDPDKLQFVYYNPKDFDFGKKKAFPFRLQHFF 258
>gi|302792238|ref|XP_002977885.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
gi|300154588|gb|EFJ21223.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
Length = 358
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 16/290 (5%)
Query: 62 VSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKK 120
VS T +S KK+L++ GG IG YLA+ L+ +GHEVT+ T G + K+
Sbjct: 17 VSIVTTASSDTPTKKILMM----GGTRFIGVYLARLLVKAGHEVTLFTRGKTPVTQKIAS 72
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ E S+ K + GD + + + F++V D NG+ V P+ D S
Sbjct: 73 ETDQEYAE-YSSKVKHIQGDRQDFDGMKSKIASAGFEIVYDINGREAVEVEPIIDAIPS- 130
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 234
+KQ+++ SSAG+Y +D PH E D P + H + E + W S RP Y+
Sbjct: 131 -LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSRHKGKLDTEALLQSKGVPWTSIRPVYIY 189
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ ++NP A ++N
Sbjct: 190 GPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQLGHVKDLADAFVRVLDNP-TAFGQVYN 248
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVF 343
+ + VT G+A+ CA+A G P E+VHY+PK KK+FP R+ F
Sbjct: 249 ISGAKYVTFAGIARACAKAGGFPTPELVHYNPKDFDFGKKKSFPLRDQHF 298
>gi|302795358|ref|XP_002979442.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
gi|300152690|gb|EFJ19331.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
Length = 358
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 16/290 (5%)
Query: 62 VSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKK 120
VS T +S KK+L++ GG IG YLA+ L+ +GHEVT+ T G + K+
Sbjct: 17 VSIVTTASSDTPAKKILMM----GGTRFIGVYLARLLVKAGHEVTLFTRGKTPVTQKIAS 72
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ E S+ K + GD + + + F++V D NG+ V P+ D S
Sbjct: 73 ETDQEYAE-YSSKVKHIQGDRQDFDGMKSKIASAGFEIVYDINGREAVEVEPIIDAIPS- 130
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 234
+KQ+++ SSAG+Y +D PH E D P + H + E + W S RP Y+
Sbjct: 131 -LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSRHKGKLDTEALLQSKGVPWTSIRPVYIY 189
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ ++NP A ++N
Sbjct: 190 GPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQLGHVKDLADAFVRVLDNP-TAFGQVYN 248
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVF 343
+ + VT G+A+ CA+A G P E+VHY+PK KK+FP R+ F
Sbjct: 249 ISGAKYVTFAGIARACAKAGGFPTPELVHYNPKDFDFGKKKSFPLRDQHF 298
>gi|428774896|ref|YP_007166683.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
gi|428689175|gb|AFZ42469.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
Length = 311
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 149/275 (54%), Gaps = 23/275 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEVT+ G+ S P E+ G +
Sbjct: 2 RILIM----GGTRFIGVALTKILVEQGHEVTLFNRGNNPS------PVEGVREV--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D ++ + + +FD + DNNG+ L +P+ + K ++ F+++SSAG+Y +D
Sbjct: 50 K---DTDQLKDQLAKESFDAIFDNNGRELSDTQPLIELFKDQ-IQHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D + P + H E Y+SE W S RP Y+ G+GN D E WFFDRI+R
Sbjct: 106 QMPHYEADAIDPKSRHKGKHDTETYLSEMGVPWTSVRPVYIYGAGNYNDLEAWFFDRILR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG G T + HV+DL+ + + N +A + ++N+ +R VT +G+A+ CA+
Sbjct: 166 DRAIPIPGHGEHITQLGHVQDLAHAMASILGNKKALAQ-VYNISGERYVTFNGIARACAK 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A G +++VHY+PK KK FP R F
Sbjct: 225 AVGKSPEDLKLVHYNPKDFDFGKKKPFPLRMQHFF 259
>gi|413941841|gb|AFW74490.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954161|gb|AFW86810.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 320
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 146/269 (54%), Gaps = 14/269 (5%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPA 142
GG IG +L++ L+ GH+VT+ T G + ++ P E K + GD
Sbjct: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQ 59
Query: 143 E---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+ V + +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH
Sbjct: 60 DFEFVKTSLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPH 117
Query: 200 VEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV 256
E D V P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+
Sbjct: 118 CEVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
Query: 257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
PIPG+G Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G
Sbjct: 178 PIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGF 236
Query: 317 PV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
P E+VHY+PK KKAFPFR+ F
Sbjct: 237 PEPELVHYNPKEFDFGKKKAFPFRDQHFF 265
>gi|121077622|gb|ABM47306.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 206
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI NT GGHA IG YLAKELL GH+VTIM GDE S KK PF++++E+ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDE-SKLTKKTPFSKYSELARDGATI 91
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD- 195
WGDP + G +FDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 92 AWGDPTKPSTYPRG-SFDVVYDNNGKDLSSCQPMIDHFKHK-VDHYVFVSSAGAYK-ADS 148
Query: 196 -EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 149 IEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGPNTAKDCEQWFVDRIIR 206
>gi|302828240|ref|XP_002945687.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
gi|300268502|gb|EFJ52682.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
Length = 401
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 155/283 (54%), Gaps = 21/283 (7%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPP--FNRFNE 128
E KK+L++ GG IG YLA++L+ +GHEVT+ T G + + P F F+
Sbjct: 54 EPKKILMM----GGTRFIGLYLARQLVEAGHEVTLFTRGKKKVAYEIPDDTPASFATFSR 109
Query: 129 IVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
+ K + GD EV + F VV D NG+ V PV +S+ ++Q+++
Sbjct: 110 SI----KHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLAGTRST-LEQYIYC 164
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
SSAG+Y D+ PH E D V P + H + E+ + ++ N+ S RP Y+ G N
Sbjct: 165 SSAGVYLKNDQMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPV 224
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFF R+ RP+P+PGSG Q T + HV+DL++ + N +AA I+N+ +R VT
Sbjct: 225 EEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLATAFVKVLGNKKAA-RQIYNISGERFVT 283
Query: 303 LDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
DG+AK CA+A GLP E++HY+ K K FP R+ F
Sbjct: 284 FDGIAKACAKAMGLPEPELIHYNAKEFDFGKDKPFPMRDQHFF 326
>gi|425454397|ref|ZP_18834140.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389804948|emb|CCI15631.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 311
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 144/274 (52%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D A++ + F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 50 T---DAAQLKEKLKNEDFEAIFDNNGRELRDTQPLVEIFGDR-IGHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFDR+VR
Sbjct: 106 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 166 NRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G +EIV+Y+PK KK FP R F
Sbjct: 225 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|443475570|ref|ZP_21065515.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
gi|443019578|gb|ELS33647.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
Length = 311
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 147/274 (53%), Gaps = 31/274 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTVWGD--- 140
GG IG L K L+ GHEVT+ G KKP P AG +T+ GD
Sbjct: 2 GGTRFIGVSLVKLLVSQGHEVTLFNRG-------KKPSPI--------AGLRTIIGDRTD 46
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
P ++ + + G +F+V+ DNNG+ L +P+ + + ++ F+++SSAG+Y +D P+
Sbjct: 47 PQQLQDKLRGESFEVIFDNNGRELSDTQPLVEIFRDR-LQHFVYMSSAGVYLDSDILPYR 105
Query: 201 EGDVVKPDAGH---VQVEKYI----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E D P + H + E Y+ SEN + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 ETDATDPKSRHKGKLDTESYLQQLHSENGFPYTSIRPTYIYGPQNYNDVEAWFFDRIVRD 165
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RP+PIPG+G T + HV DL+ + + N +A I+N+ +R VT G+AK CA A
Sbjct: 166 RPIPIPGNGQFITQLGHVEDLARAMAAVLGNQQAIGE-IYNISDNRYVTFVGLAKQCAIA 224
Query: 314 AGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
AG + V+Y+PK KKAFPFR F
Sbjct: 225 AGKDPSQLNFVYYNPKDFDFGKKKAFPFRLQHFF 258
>gi|384248223|gb|EIE21708.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 369
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 162/304 (53%), Gaps = 15/304 (4%)
Query: 48 SSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI 107
++F +++R++ S V+ SAA K+VLI+ GG IG YLA++L+ +GH VT+
Sbjct: 23 AAFRPALKANKRANRS-IAVRVSAAATKEVLIL----GGTRFIGVYLARQLVEAGHGVTL 77
Query: 108 MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNL 164
+T G + + + + K + D + + + + G FD V D NG+
Sbjct: 78 LTRGKKEVTYQIPDDTDESYKAYKSAVKHIAADRKDKSMLDSQLAGKKFDAVYDMNGREA 137
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISEN 221
D V V Q++F SSAG+Y + + PH E D V P + H + E + E
Sbjct: 138 DEADLV--LGALGDVGQYIFCSSAGVYLKSSQMPHFEVDAVDPKSRHKGKLNTEALLEEK 195
Query: 222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
NW S RP Y+ G N EEWFF RI RP+PIP SG Q T + HV+DL++
Sbjct: 196 NVNWTSIRPVYIYGPLNYNPVEEWFFHRIKEGRPIPIPNSGQQVTQLGHVKDLATAFVKV 255
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRN 340
++N E AS ++N+ +R VT DG+AK CA AAG P E+VHY+PK KKAFP R+
Sbjct: 256 LDN-EKASRQVYNISGERFVTFDGIAKACAAAAGAPEPELVHYNPKDFDFGGKKAFPLRD 314
Query: 341 MVFI 344
F
Sbjct: 315 QHFF 318
>gi|425447101|ref|ZP_18827093.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732385|emb|CCI03640.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 311
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 144/278 (51%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + +F+ + DNNG+ L +P+ + ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDASQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRDR-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDTKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIP G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPSHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
CA A G +EIV+Y+PK KK FP R F
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHF 258
>gi|428173772|gb|EKX42672.1| hypothetical protein GUITHDRAFT_73722 [Guillardia theta CCMP2712]
Length = 322
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 151/271 (55%), Gaps = 11/271 (4%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV 137
LIV GGH IGF+LA++L G +VT++ +++ KM+K PF + EI + G + +
Sbjct: 5 LIVQNKGGGHGEIGFHLARQLRSKGLDVTLL---QDSAAKMEKLPFKNYGEIEAEGVEII 61
Query: 138 ---WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIYKP 193
DP+ + + + G +F V DN K+ V VA AK++ VK + ++SSAG+Y+
Sbjct: 62 SCNLEDPSRILSSLSGKSFTHVFDNYAKD-KTVSTVAGLAKNTWRVKNYAYVSSAGMYES 120
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVR 252
+ P VE K G VE++++ W SFRPQY+ G NK D +WFF RI R
Sbjct: 121 SVPQPMVETGATKA-TGQRAVEEFLASQELPWTSFRPQYIYGPYTNKRDYLDWFFHRITR 179
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP P+PG G Q ++ V D+++ML V +AA +FN +D V+ + ++ Q
Sbjct: 180 DRPCPLPGDGNQMASVTRVEDVAAMLASVVGKEDAAKGQVFNCGTDNMVSYRQICEMIGQ 239
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
G +IV Y+PK+ + K AFPFRN F
Sbjct: 240 VVGKSPKIVTYNPKSFEL-PKGAFPFRNTEF 269
>gi|413941842|gb|AFW74491.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954160|gb|AFW86809.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 321
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 146/270 (54%), Gaps = 15/270 (5%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPA 142
GG IG +L++ L+ GH+VT+ T G + ++ P E K + GD
Sbjct: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQ 59
Query: 143 E---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+ V + +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH
Sbjct: 60 DFEFVKTSLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPH 117
Query: 200 VEG-DVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 255
E D V P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP
Sbjct: 118 CEVVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 177
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+PIPG+G Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G
Sbjct: 178 IPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGG 236
Query: 316 LPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
P E+VHY+PK KKAFPFR+ F
Sbjct: 237 FPEPELVHYNPKEFDFGKKKAFPFRDQHFF 266
>gi|428222381|ref|YP_007106551.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
gi|427995721|gb|AFY74416.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
Length = 310
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 30/272 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +G L K LL GHEV + FNR N+ G + + GD P
Sbjct: 2 GGTRFLGVALTKTLLAQGHEVVL---------------FNRGNKPAPEGVRVIIGDRTDP 46
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
++ + FD + DNNG+ L +P+ D + ++ F+++SSAG+Y ++ P+ E
Sbjct: 47 IQIKEKLLYEQFDAIFDNNGRELTDTKPLVDLFRDR-IRHFVYMSSAGVYLDSEILPYFE 105
Query: 202 GDVVKPDAGH---VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
GD V P + H + E Y+ + + + S RP Y+ G GN D E WFFDRIVR R
Sbjct: 106 GDAVDPKSRHKGKLHTESYLKQAYDEIGFPFTSIRPTYIYGPGNYNDLEAWFFDRIVRDR 165
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
P+PIPG+G T + HV DL + + AV + I+N+ R VT G+A+ A AA
Sbjct: 166 PIPIPGNGKFITQLGHVEDLVAAMA-AVLDKSITLGEIYNISDIRYVTFTGLAQATAIAA 224
Query: 315 GL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
G ++IV+Y+PK KKAFP R+ F
Sbjct: 225 GKSPDQIKIVYYNPKDFDFGKKKAFPLRSQHF 256
>gi|428773832|ref|YP_007165620.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
gi|428688111|gb|AFZ47971.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
Length = 314
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 141/274 (51%), Gaps = 23/274 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ S P + +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVNQGHEVVLFNRGNNPS------PVDGIQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T ++ + G FD + DNNG+ L +P+ D V F+++SSAG+Y P+
Sbjct: 50 T---SAVQLEEKLKGEKFDAIFDNNGRTLSDTKPLVDLFNGK-VSHFVYVSSAGVYLPSH 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D + P++ H + E Y+ E+ + S RP Y+ GSGN D E WFFDR+VR
Sbjct: 106 QMPHREDDPLNPESRHRGKFETEAYLKESGIPFTSIRPVYIYGSGNYNDLENWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
P+PIP G+ T HV DL+ + + N +A I+N+ DR T G+A CA
Sbjct: 166 DLPIPIPHHGLYITQFGHVEDLAVAMAGVLGNSQAIGQ-IYNISGDRYTTFTGLALACAS 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
A G ++I +YDP + +KAFP R F
Sbjct: 225 AMGKNPNQIDIRYYDPNQVDVGNRKAFPIRMQHF 258
>gi|307104990|gb|EFN53241.1| hypothetical protein CHLNCDRAFT_36589 [Chlorella variabilis]
Length = 407
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 161/293 (54%), Gaps = 28/293 (9%)
Query: 66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD--------ENSDK 117
TV ++A KK+L++ GG IG YLA++L+ +GHEVT++T G +++D+
Sbjct: 70 TVMSAAVAPKKILML----GGTRFIGLYLARQLIEAGHEVTLLTRGKKPVTYRIPDDTDE 125
Query: 118 MKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
F +F + V A +T D + + F+VV D NG+ D V D
Sbjct: 126 ----SFAKFEQSVKHIACDRT---DAEAMKTHLQNKGFEVVYDINGREADECALVLDAV- 177
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQY 232
++Q++F SSAG+YK +D+ PH E D V + H + E+ + + NW S RP Y
Sbjct: 178 -GPIQQYIFCSSAGVYKKSDQMPHREEDEVDFKSRHKGKLFTEELLEQRGINWTSVRPVY 236
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G N EE+FF RI RP+ +PGSGMQ T + HV+DL++ + NP+AA +
Sbjct: 237 IYGPLNYNPVEEFFFHRIKAGRPICVPGSGMQVTQLGHVKDLATAFVKILGNPKAA-RQV 295
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
+N+ +R VT DG+AK CA A G P E+VH++PK KAFP R+ F
Sbjct: 296 YNVAGERYVTFDGLAKACAAAMGAPEPELVHFNPKDFDFGKAKAFPMRDQHFF 348
>gi|422293604|gb|EKU20904.1| nad-dependent epimerase dehydratase [Nannochloropsis gaditana
CCMP526]
Length = 354
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 17/288 (5%)
Query: 66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR 125
T+KA A KKVLI+ GG G YL KEL G+++T+ G + +
Sbjct: 25 TMKAPGA-GKKVLII----GGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAES 79
Query: 126 FNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
+ E + V GD P ++ + FDV+ D NG+ +P+AD A + V F
Sbjct: 80 YAERIGQA-TFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLAD-AYNGRVDHF 137
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNN 239
+++SSAG+Y +D PH E D V P + H + E Y++E + S RP Y+ G N
Sbjct: 138 VYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNY 197
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
EE+FF R+V R V +PG G T + HV+DL++ + + E A ++N+ +
Sbjct: 198 NPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGR-EQAKGQVYNVQHPQ 256
Query: 300 AVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A+T DG +L A+AAG VEIVHYDPK KKAFP R F
Sbjct: 257 AITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFF 304
>gi|242041721|ref|XP_002468255.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
gi|241922109|gb|EER95253.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
Length = 189
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 97/170 (57%), Gaps = 43/170 (25%)
Query: 210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD--------------------- 248
GHV VEKYI+E F +WASFRPQYMIGS NNKDCEEWFFD
Sbjct: 12 GHVVVEKYIAEQFGSWASFRPQYMIGSSNNKDCEEWFFDSNNNNQQPVTPFNPVVFSSLP 71
Query: 249 ------------------RIVRKRPVPI-PGS-GMQFTNIAHVRDLSSMLTLAVENPEAA 288
R R P PG Q TNIAHVRDLS ML+L+VE P AA
Sbjct: 72 AAVHDRLQQQQGLRGVVLRQDRTEPAGADPGERDAQLTNIAHVRDLSRMLSLSVEKPGAA 131
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
IFN VSDRAVTL GM KLCA AG VEIV DP AAG+D KKAFPF
Sbjct: 132 LGKIFNCVSDRAVTLSGMNKLCAAGAG--VEIVLNDPAAAGVDDKKAFPF 179
>gi|24251257|gb|AAN46177.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 147/279 (52%), Gaps = 33/279 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG L ++LL +GH VT+ FNR + AG +
Sbjct: 2 RILVI----GGSRFIGVALVRQLLAAGHAVTV---------------FNRGSRPALAGVE 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY 191
+ GD PA + + G +FDVV DN G+ +A A A G +Q +++SSAG+Y
Sbjct: 43 QLVGDRQDPAALAQL-QGRSFDVVFDNTGR--EAAETQALVASLDGQFQQLIYVSSAGVY 99
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ P E D V P + H + E ++ + + +FRP Y+ G GN E+W
Sbjct: 100 AASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGPGNYNPLEQWSSI 159
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
P+PIPG+G+ T + HV DL++ + AV+NP A I+NL DR V+ DG+A+
Sbjct: 160 AFCVIGPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLSGDRYVSFDGLAR 218
Query: 309 LCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
CA AAG + +VHYDPK + +KAFP R FI
Sbjct: 219 ACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFI 257
>gi|299115197|emb|CBN74028.1| 38 kDa ribosome-associated protein precursor [Ectocarpus
siliculosus]
Length = 383
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 17/302 (5%)
Query: 48 SSFLACPASSRRSSVSAFTVKASAAE-KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
+ F P + R + + +++ +AAE K++VL++ GG G YL KEL GHEV
Sbjct: 23 AGFALSPNAMRTGARPSSSLRMAAAEGKQRVLVI----GGTRFSGLYLTKELHSRGHEVV 78
Query: 107 IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKN 163
+ G + ++ + + V KT+ GD P + +GG FD V D N +
Sbjct: 79 LYNRGQTANKQLPCESDAEYAKRVE-DVKTIVGDRKDPEVCQSTLGGEKFDAVFDMNARE 137
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE 220
+ + VAD K V ++F+SSAG+Y ++ PH E D P + H + E Y+ E
Sbjct: 138 VSDTKAVADVFKGK-VDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLEE 196
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ S RP Y+ G N E++FF+R+ + R V +PG G T + HV+DL+ +
Sbjct: 197 IGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVKDLARAMA- 255
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFP 337
V E+A ++N+ +RA++ DGM + CA+A G V+I H++P KKAFP
Sbjct: 256 NVLGKESAKGQVYNVQDNRAISFDGMVRACAEAMGKDPAAVKIKHFEPTNFDFGKKKAFP 315
Query: 338 FR 339
R
Sbjct: 316 MR 317
>gi|223995261|ref|XP_002287314.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976430|gb|EED94757.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 349
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 22/291 (7%)
Query: 60 SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK 119
++VS F++ S+A LIV GGH +GF LAK L S ++T +T+ +++
Sbjct: 15 TTVSGFSLSMSSA-----LIVQNKGGGHGELGFQLAKN-LSSNSKITSITILQDSACNAA 68
Query: 120 KPPFNRFN------EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVA 171
K PF + +IV A +++ +++G ++D V DN K + A + V
Sbjct: 69 KEPFASYATDIPNVKIVKADFADESMTASDMQSLLGQ-SYDYVWDNASKKASCGAGKAVI 127
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
D K K ++SSAGIYKP DE P E VK AG V+ EKY E + SFRPQ
Sbjct: 128 DCVKEWNSKLLTYVSSAGIYKPKDEFPMPETTPVKDTAGQVEYEKYAVEKGLPFVSFRPQ 187
Query: 232 YMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-S 289
Y+ G +NK D +W+FDR+VR P+PIPG G Q ++ + D++S+L + + AA
Sbjct: 188 YIYGEKSNKWDYIDWYFDRLVRGEPLPIPGDGSQKVSLTNSEDVASLLASVLNDESAAVG 247
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFR 339
FN +D+ VT D +A +CA+ AG + +I HYD K FPFR
Sbjct: 248 QTFFNCGTDQLVTYDEVALMCAEVAGVMDAKIHHYDDSL----GKAKFPFR 294
>gi|452825058|gb|EME32057.1| NAD-dependent epimerase/dehydratase [Galdieria sulphuraria]
Length = 378
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 147/273 (53%), Gaps = 17/273 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG G Y+A+EL SGH+V + G + S K++ F +S + GD
Sbjct: 49 GGTRFSGLYIARELALSGHQVVLFNRGSVPIGDISLKIRGETEKDFQTRMS-NTHLIKGD 107
Query: 141 ---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
P ++ VV +D + DNNG+ L +P D S ++ ++++SSAG+YK +
Sbjct: 108 RTHPQDILRVVQSEKWDAIFDNNGRELSDSKPWIDGLGHS-IQHYMYMSSAGVYKESGLL 166
Query: 198 PHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
PH E D V ++ H ++ E+Y+ ++ + RP Y+ G N EEWFF RI + R
Sbjct: 167 PHREEDAVDHNSRHKGKLETEQYLKQSGIPFTCIRPTYIYGPRNYNPVEEWFFKRIDQNR 226
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
P+PIPG G+ T + HV DL+ + LA+ N +A S +N+ +VT DG AKLCA AA
Sbjct: 227 PIPIPGHGLHITGLGHVEDLAKAMVLALGNQQAVSQT-YNIQGRYSVTFDGFAKLCAIAA 285
Query: 315 GL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
G +E++HYDPK KK+FPFR F
Sbjct: 286 GKDPNKLELIHYDPKKV-PKDKKSFPFRPQHFF 317
>gi|219111441|ref|XP_002177472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217412007|gb|EEC51935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 404
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 177/331 (53%), Gaps = 27/331 (8%)
Query: 31 LSFSSYSHLSSLVSI-SPSSFLACPASSRRSSVSAFT--VKASAAEKKKVLIVNTNSGGH 87
+S + ++ S+LV++ S S+F+ + S+ SA T + SAA LIV GGH
Sbjct: 1 MSLTRWAFASTLVTLFSASAFVPQHSRSKSHHGSAATTHLYMSAA-----LIVQNKGGGH 55
Query: 88 AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN------EIVSAGGKTVWGDP 141
+GF LAK +L ++T +T+ +++ K PF + ++V A
Sbjct: 56 GELGFQLAK-VLSDNDKITSVTILQDDACKDSAEPFQSYATDLPDVKVVKASLGDESMTA 114
Query: 142 AEVGNVVG-GVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEP- 197
+ +++G FD V DN K+ A + + D AK+ VK F ++SSAG+Y+P AD P
Sbjct: 115 TALQDILGKDAAFDYVWDNASKSPKGAGQAICDLAKAWNVKLFTYVSSAGMYQPTADAPF 174
Query: 198 PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPV 256
P E +K AG Q ++Y + +FRPQY+ G NK D +W+FDR+VR+ P+
Sbjct: 175 PMPETTPIKESAGQNQFDQYAIQQGLPLVTFRPQYIYGPKANKHDYIDWYFDRLVRELPL 234
Query: 257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAG 315
PIPG G Q ++ + D++S+L + + AA + +FN +D+ V+ D +A LCA+AAG
Sbjct: 235 PIPGDGTQKLSLTNAEDVASLLAAPLNDEAAAIAQRVFNCGTDQLVSYDEVAYLCAEAAG 294
Query: 316 L---PVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+ V I HYD G K FPFR F
Sbjct: 295 IDKDKVMIEHYDADMFG---KATFPFRMTDF 322
>gi|387196718|gb|AFJ68775.1| hypothetical protein NGATSA_3008300 [Nannochloropsis gaditana
CCMP526]
Length = 373
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 22/298 (7%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD 112
P SR SS+ A + LI+ GGH IG++LA +L+ G +VT++ D
Sbjct: 40 PLRSRGSSM--------MAAGQSALIIQNKGGGHGEIGYHLALKLVKEKGLQVTLLN--D 89
Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
+ D+ K PF + ++ AG + D A+V +++ G +F V DN K+ +A+ P
Sbjct: 90 KYDDQ--KQPFKSYGDLTGAGVDILSADLGSADVKSLLSGRSFHYVFDNFAKSSEALPPF 147
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
D A++ ++ ++F+SS G+Y+ D P +E V + ++E I + + FRP
Sbjct: 148 LDLARAWPLQVYVFVSSGGMYQVEDSFPLLEDSPVALNEPR-KIELAIEASGLPYTFFRP 206
Query: 231 QYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
QY+ G +K D +WFF R+VR +P+P+P G QFT + HV D++S+L V+NP+A
Sbjct: 207 QYIYGPLTSKRDYLDWFFHRLVRDKPLPLPLHGDQFTTLTHVEDVASLLAAVVDNPQAL- 265
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKA-FPFRNMVF 343
+FN SDR +T G+ + A G IV YDP D K +PFRN F
Sbjct: 266 RQVFNCASDRCITFKGVVGVAGNAMGRKDAKEAIVLYDPAERKADLPKGWWPFRNTHF 323
>gi|318041621|ref|ZP_07973577.1| nucleotide sugar epimerase [Synechococcus sp. CB0101]
Length = 314
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 29/279 (10%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
+ K+L++ GG +G L +LL GH +T+ F R N+ V AG
Sbjct: 9 RVKILVM----GGTRFVGKPLVAQLLSEGHALTL---------------FTRGNKPVPAG 49
Query: 134 GKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD AE + G +FDV++D++G+ LD R V + + +FL++SSAG+Y
Sbjct: 50 VEHLCGDRSTAEGLAALQGRSFDVIVDSSGRTLDDSRAVIERTGAPS-HRFLYVSSAGVY 108
Query: 192 KPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++ P E P +G + E +++ + SFRP Y++G+GN E WFFD
Sbjct: 109 ADSELWPLNEDSPTDPLSRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAGNYNPVESWFFD 168
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIV RPVP+PG G T + HV DL++ + L++ +AA++ I+N S + +T G+
Sbjct: 169 RIVHGRPVPLPGDGSTITQLGHVNDLATAMALSL-GVDAAANRIYNCSSVQGITFKGLVA 227
Query: 309 LCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A+A G VEI +DP A+KAFP R F+
Sbjct: 228 AAARACGKDPASVEIRSFDPAGLDKKARKAFPLRQAHFL 266
>gi|428171867|gb|EKX40780.1| hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712]
Length = 341
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 143/286 (50%), Gaps = 21/286 (7%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K+ VLI+ GG G YL KEL+ GH+VT+ G + + + + +
Sbjct: 3 KESVLII----GGTRFSGAYLWKELVDRGHQVTLYNRGKTSPKPLPGESESDYKRRLETT 58
Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW--AKSSGVKQFLFISSA 188
K + GD P ++ N+V + V D NG+ P+AD S +K F+++SSA
Sbjct: 59 -KYLMGDRKDPEQIKNLVDPSLYTYVYDMNGREASDTAPLADLFTTSRSELKSFIYMSSA 117
Query: 189 GIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE---NFSNWASFRPQYMIGSGNNKDC 242
G+YK + E PH+E D V P + H ++ E Y+ NF NW S RP Y+ G N
Sbjct: 118 GVYKKSSEMPHMEHDAVDPKSRHKGKLETEAYLRSLGGNF-NWCSIRPTYICGPQNYNVV 176
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E++F +R KR +PG G T HV+DL+ + + + + ++N+ + A+T
Sbjct: 177 EQYFLERADAKRGFIVPGHGEHLTGFGHVKDLAVAMANVIGREKKTNGQVYNIQNTNAIT 236
Query: 303 LDGMAKLCAQAAGL---PVEIVHYDPKAAGI-DAKKAFPFRNMVFI 344
DG ++ A+ G VEIVHY+PK + KKAFP R F
Sbjct: 237 FDGACRVAAEVVGTNPDDVEIVHYNPKEFKFPEGKKAFPMRPQHFF 282
>gi|77024085|gb|ABA55513.1| chloroplast mRNA binding protein csp41 [Isochrysis galbana]
Length = 313
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 100 GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVVGGVTFDV 155
G G VTI+ E K + ++ +AG + +W D E +GG TF
Sbjct: 5 GQGRPVTIL---HEGKGPNAKEAHRAYGDLDAAGVQVLWCDDLTNAPECLAKLGGATFGS 61
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQ 213
V+DN K+ + ++P A AK GV F ++SSAG+Y PA D P E VK G Q
Sbjct: 62 VVDNWSKSPEDIQPYAQAAKDWGVSTFAYVSSAGMYNPAKGDFSPITEECPVK-STGQRQ 120
Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
E+ + E W FRPQY+ G K +FFDR+ R P+P+PG G Q ++ H D
Sbjct: 121 AEEKLGEMELPWTCFRPQYVYGPKQGKSYLAYFFDRLTRGAPIPVPGDGNQIVSMTHAAD 180
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
++M+ A++N EAA +FN + +T D +A LCA+A G+ +I HYDP A G +
Sbjct: 181 NAAMIATAIDN-EAAVGQVFNCATSAVITYDDLALLCARATGVEAKISHYDPAAVGGGSN 239
Query: 334 K 334
K
Sbjct: 240 K 240
>gi|115445775|ref|NP_001046667.1| Os02g0316800 [Oryza sativa Japonica Group]
gi|113536198|dbj|BAF08581.1| Os02g0316800, partial [Oryza sativa Japonica Group]
Length = 143
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
RPV DWAK++GV QF +SSAGIY P+DEPPH+EGD VK +AGHV VEKYI+E F +WAS
Sbjct: 9 RPVVDWAKAAGVGQF--VSSAGIYTPSDEPPHIEGDAVKENAGHVSVEKYIAEQFGSWAS 66
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRP------VPIPGSGMQFTN 267
FRPQYMIGSGNNKDCEEWFFD + + P +P P + + F+N
Sbjct: 67 FRPQYMIGSGNNKDCEEWFFDSKITQIPPTKFSQIPYPHTKI-FSN 111
>gi|317970075|ref|ZP_07971465.1| nucleotide sugar epimerase [Synechococcus sp. CB0205]
Length = 306
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 147/277 (53%), Gaps = 29/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L ++L +GH +T+ T G K P V AG +
Sbjct: 2 KILVM----GGTRFVGRPLVQQLQDAGHALTLFTRG-------KNP--------VPAGVE 42
Query: 136 TVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD AE + + G FDV++D++G+ + R V + + +F+++SSAG+Y
Sbjct: 43 HLCGDRSTAEGLSALAGRQFDVIVDSSGRTVTDSRSVVE-VTGAPSHRFVYVSSAGVYAD 101
Query: 194 ADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ P E P++ H + E +++ + SFRP Y++G+GN E WFFDRI
Sbjct: 102 SALWPLTENSPTDPESRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAGNYNPVESWFFDRI 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RPVP+PG G T + HV DL++ + L++ +AA++ I+N S + ++ G+
Sbjct: 162 VHGRPVPLPGDGSTITQLGHVNDLATAMALSI-GVDAAANRIYNCSSAQGISFRGLVAAA 220
Query: 311 AQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A+A G VEI +DP + A+KAFP R F+
Sbjct: 221 ARACGKDPASVEIRSFDPSSLDKKARKAFPLRMAHFL 257
>gi|77024145|gb|ABA55543.1| chloroplast mRNA binding protein csp41 [Karlodinium micrum]
Length = 428
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 153/292 (52%), Gaps = 14/292 (4%)
Query: 58 RRSSVSAFTVKASAAEK-KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENS 115
R SVS ASAA K LI+ GGH IGF+LA +L G +V I+ G E
Sbjct: 95 RHGSVSML---ASAASKVDSALIIQNKGGGHGEIGFHLALQLAKERGMKVMILHEGPE-- 149
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
K KPP + + E++SA +W D EV + F ++DN K+ D +RP A+
Sbjct: 150 -KASKPPHSAYAELLSANVDILWFDDLTRPEVLWFLDDKKFGAIIDNWSKSPDQIRPFAE 208
Query: 173 WAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
AK V + ++SSAG+Y P A + + D +G Q E+ + E ++ FRPQ
Sbjct: 209 LAKKWEVANYAYVSSAGMYTPPAGDYGAISEDASVKSSGQRQAEELLEEMKLPYSCFRPQ 268
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y+ G K ++FFDR+ RPV +P G Q + H D ++M+ AV N EAA+
Sbjct: 269 YIYGPKQGKSYLKYFFDRLTNGRPVLVPNGGDQQVTMTHAADNAAMIAAAVGN-EAAAGE 327
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+FN + +T D + +CA+A G+ +IVHY+PK I K FPFR+ F
Sbjct: 328 VFNCATSTLITYDDLVDICAKAVGVEPKIVHYNPKDFEI-PKGFFPFRDAPF 378
>gi|78184353|ref|YP_376788.1| nucleotide sugar epimerase [Synechococcus sp. CC9902]
gi|78168647|gb|ABB25744.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9902]
Length = 306
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L+ GH +T+ T G K P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVARLMAQGHALTLFTRG-------KNP--------VPAGVEHITGDRSSD 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + + G FDV++D++G+ LD R V A +F+++SSAG+Y +D P E
Sbjct: 52 EGLSALQGRAFDVIVDSSGRTLDDSRRVLT-ATGHPRHRFVYVSSAGVYAGSDHWPLDEN 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG E +++ + SFRP Y+ G GN E WFFDRIV ++PVP+P
Sbjct: 111 SPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPGNYNPIERWFFDRIVHEQPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G T + HV DL+ + ++ +AA++ I+N + VT +G+ + AQA G E
Sbjct: 171 GDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSGKQGVTFEGLIRAAAQACGKDPE 229
Query: 320 IV---HYDPKAAGIDAKKAFPFRNMVFI 344
V +DP A A+KAFP R F+
Sbjct: 230 TVVMQSFDPSALDPKARKAFPLRLNHFL 257
>gi|116070996|ref|ZP_01468265.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
gi|116066401|gb|EAU72158.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
Length = 306
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L+ GH +T+ T G K P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVARLMAQGHALTLFTRG-------KNP--------VPAGVEHITGDRSND 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E N + G FDV++D++G+ LD R V A +F+++SSAG+Y +D P E
Sbjct: 52 EGLNPLQGRAFDVIVDSSGRTLDDSRRVL-MATGHPRHRFVYVSSAGVYAGSDHWPLDEN 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG E +++ + SFRP Y+ G GN E WFFDRIV ++PVP+P
Sbjct: 111 SPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPGNYNPVERWFFDRIVHEQPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G T + HV DL+ + ++ +AA++ I+N + VT +G+ + AQA G +
Sbjct: 171 GDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSGKQGVTFEGLIRAAAQACGKDPQ 229
Query: 320 IV---HYDPKAAGIDAKKAFPFRNMVFI 344
V +DP A A+KAFP R F+
Sbjct: 230 TVVMRSFDPSALDPKARKAFPLRLNHFL 257
>gi|219128200|ref|XP_002184306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404107|gb|EEC44055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 361
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 14/291 (4%)
Query: 64 AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF 123
AF + + VLI+ GG G L KEL GH VT+ G + + +
Sbjct: 8 AFLCLWAITDAYNVLII----GGTRFSGAALWKELYDRGHTVTVYNRGKTPAQAVVRESV 63
Query: 124 NRFNEIVSAGG--KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVK 180
+ F+ + A + DP ++ ++ +D V D N + +P+A + S +K
Sbjct: 64 DDFDARIRAATFLQGDRQDPEQLRRLIDPDRYDYVYDMNAREEPDTKPLASLFVGHSQLK 123
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSG 237
Q++F+SSAG+Y +DE PH+E D V ++ H ++ E + W SFRP Y+ G G
Sbjct: 124 QYVFMSSAGVYLLSDEMPHLETDAVDANSRHKGKLESEACLQALGIPWCSFRPTYICGPG 183
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
N E +FF+R+ RPV +P G T + HV DL+ + V+ + +N+ +
Sbjct: 184 NYNPVERYFFERLEAGRPVCVPSHGQHLTGLGHVEDLAVAMANVVDRHTVTTGKTYNVQN 243
Query: 298 DRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDA-KKAFPFRNMVFI 344
+A+T DG+ + A G VEIVHYDP A KAFP R F
Sbjct: 244 RQAITFDGVVRTAAAVTGRARDSVEIVHYDPGTVEFPAGAKAFPMRPQHFF 294
>gi|352094422|ref|ZP_08955593.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
gi|351680762|gb|EHA63894.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
Length = 315
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 144/277 (51%), Gaps = 29/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G ++ P G +
Sbjct: 10 KILVM----GGTRFVGKPLVARLQEQGHALTLFTRG-----RLPAP----------EGVE 50
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+V GD + ++ + G TF+VV+D++G++LD R V + +FL++SSAG+Y
Sbjct: 51 SVRGDRSVDADLDQLKGRTFEVVIDSSGRSLDDSRRVLA-VTGAPAHRFLYVSSAGVYAA 109
Query: 194 ADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ + P E + P +G E+++ E + SFRP Y++G GN E WFFDRI
Sbjct: 110 STQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVGPGNYNPVERWFFDRI 169
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RP+P+PGSG T I H DL+ + ++E +AAS+ I+N + R +T G+ +
Sbjct: 170 VNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNCSASRGITFRGLIEAA 228
Query: 311 AQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A A G +++ +DP A+KAFP R F+
Sbjct: 229 AVACGRDPKGLDLRPFDPSGLDPKARKAFPLRLSHFL 265
>gi|87303508|ref|ZP_01086291.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
gi|87281921|gb|EAQ73884.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
Length = 308
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 21/266 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG L +LL +GHE+T+ T G + P E +S G ++ DPA +
Sbjct: 9 GGTRFIGKPLVAQLLAAGHELTLFTRG--------RQPLPEGVEHLS-GDRS---DPAAL 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ G FDV++D++G++ + V + + + F+++SSAG+Y ++ P E
Sbjct: 57 -EPLRGRAFDVIIDSSGRSCADSQAVVERTGAPSYR-FVYVSSAGVYADSELWPLDEEAT 114
Query: 205 VKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
P AG + E ++ + + SFRP Y+ G GN E WFFDRIV +PVP+PG
Sbjct: 115 TDPASRHAGKLDTEAWLRQQAIPFTSFRPTYIYGPGNYNPVESWFFDRIVHGQPVPLPGD 174
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---V 318
G T + HV DL++ + L ++ EAA++ I+N + VT G+ A+A G+ V
Sbjct: 175 GSTITQLGHVSDLATAMALCLDV-EAAANRIYNCSGAKGVTFRGLVAAAAKACGVEPEAV 233
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMVFI 344
EI +DP A+KAFP R F+
Sbjct: 234 EIRSFDPSGLDKKARKAFPLRLAHFL 259
>gi|33862792|ref|NP_894352.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9313]
gi|33634708|emb|CAE20694.1| possible mRNA-binding protein [Prochlorococcus marinus str. MIT
9313]
Length = 341
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 146/295 (49%), Gaps = 35/295 (11%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R+S+ AF A K+LI+ GG +G L L GH +T+ T G +
Sbjct: 24 RASICAFDDSAVL----KILIM----GGTRFVGKPLVTRLQAQGHALTLFTRGRHS---- 71
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPA--EVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAK 175
+ G + + GD E + + G +FDV++D++G+ L D+ R VA
Sbjct: 72 -----------LPDGVEHLSGDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVA--CT 118
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQY 232
+FL++SSAG+Y ++E P E P+ AG Q E ++ + + SFRP Y
Sbjct: 119 GEPKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTY 178
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G GN E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I
Sbjct: 179 IYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRI 237
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+N S R +T G+ A+A G VE+ +DP A+KAFP R F+
Sbjct: 238 YNCSSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFL 292
>gi|427702066|ref|YP_007045288.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
gi|427345234|gb|AFY27947.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
Length = 305
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 135/268 (50%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G L LLG+GHE+++ F R + V AG + + GD A
Sbjct: 7 GGTRFVGRPLVNRLLGAGHELSL---------------FTRGRQPVPAGVEHLQGDRSSA 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + FDV++D++G+ L+ R V + + +++SSAG+Y ++ P E
Sbjct: 52 EGLAALQDRPFDVIVDSSGRTLEDTRQVIERTGPPS-HRLVYVSSAGVYADSELWPLDED 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + + SFRP Y++G GN E WFFDR+V RPVP+P
Sbjct: 111 SPTDPQSRHAGKLDTEAWLRQEGIPFTSFRPTYIVGPGNYNPVESWFFDRLVHGRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL++ + +E EAA++ I+N + ++ G+ A+A G
Sbjct: 171 GDGSTITQLGHVADLAAAMARCIEV-EAATNRIYNCTGSQGISFRGLVAAAARACGTDPE 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
VE+ +DP A+KAFP R F+
Sbjct: 230 AVEVRSFDPAGLDKKARKAFPLRLAHFL 257
>gi|254431964|ref|ZP_05045667.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
gi|197626417|gb|EDY38976.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
Length = 308
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L ++LL +GH +T+ T G + P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVEQLLAAGHGLTLFTRG-------RNP--------VPAGVEHLVGDRSAP 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
++ + G F V++D++G+ L R V + + +F+++SSAG+Y ++ P E
Sbjct: 52 EDLAPLAGRRFAVIVDSSGRTLADSRAVLE-RTGAPEHRFVYVSSAGVYADSELWPLDED 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + + SFRP Y++G GN E WFFDRI+ RPVP+P
Sbjct: 111 SPTDPASRHAGKAETETWLRQQGIPFTSFRPTYIVGPGNYNPVERWFFDRILHGRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---L 316
G G T + HVRDL++ + +E EA+++ I+N + VT G+ + A+A G
Sbjct: 171 GDGSTITQLGHVRDLATAMARCIEV-EASANRIYNCTGTKGVTFRGLVEAAARACGQDPA 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
VE+ +DP A+KAFP R F+
Sbjct: 230 AVEVRSFDPGGLDKKARKAFPLRLAHFL 257
>gi|113955374|ref|YP_730928.1| nucleotide sugar epimerase [Synechococcus sp. CC9311]
gi|113882725|gb|ABI47683.1| Possible nucleotide sugar epimerase [Synechococcus sp. CC9311]
Length = 315
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 143/277 (51%), Gaps = 29/277 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G ++ P G +
Sbjct: 10 KILVM----GGTRFVGKPLVARLQDQGHALTLFTRG-----RLPSP----------EGVE 50
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+V GD + ++ + G F+V++D++G++LD R V + +FL++SSAG+Y
Sbjct: 51 SVQGDRSVDADLEQLKGRGFEVIIDSSGRSLDDSRRVLAMTGAP-THRFLYVSSAGVYAA 109
Query: 194 ADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ + P E + P +G E+++ E + SFRP Y++G GN E WFFDRI
Sbjct: 110 STQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVGPGNYNPVERWFFDRI 169
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RP+P+PGSG T I H DL+ + ++E +AAS+ I+N + R +T G+ +
Sbjct: 170 VNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNCSASRGITFRGLIEAA 228
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A A G +++ +DP A+KAFP R F+
Sbjct: 229 AVACGRDPKSLDLRPFDPSGLDPKARKAFPLRLSHFL 265
>gi|124023447|ref|YP_001017754.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9303]
gi|123963733|gb|ABM78489.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9303]
Length = 341
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 35/295 (11%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R+S+ AF A K+LI+ GG +G L L GH +T+ T G +
Sbjct: 24 RASICAFDDSAVL----KILIM----GGTRFVGKPLVTRLQAQGHALTLFTRGRHS---- 71
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNV--VGGVTFDVVLDNNGKNL-DAVRPVADWAK 175
+ G + + GD + + G +FDV++D++G+ L D+ R VA
Sbjct: 72 -----------LPDGVEHLSGDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVA--CT 118
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQY 232
+FL++SSAG+Y ++ P E P+ AG Q E ++ + + SFRP Y
Sbjct: 119 GEPKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTY 178
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G GN E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I
Sbjct: 179 IYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRI 237
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+N S R +T G+ A+A G VE+ +DP A+KAFP R F+
Sbjct: 238 YNCSSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFL 292
>gi|148239500|ref|YP_001224887.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
gi|147848039|emb|CAK23590.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
Length = 307
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH++T+ T G ++P + G ++ GD +
Sbjct: 7 GGTRFVGKPLVSRLLQQGHQLTLFTRG-------RQP--------LPEGVESCIGDRQDA 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ + G F+VV+D++G+ L + V + + +FL++SSAG+Y +D P E
Sbjct: 52 AALEQLRGRRFEVVIDSSGRTLADSQKVIERTGAPS-HRFLYVSSAGVYAGSDTWPLDEQ 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG + E ++ + SFRP Y++G GN E WFFDRIV +RPVP+P
Sbjct: 111 SPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPGNYNPVERWFFDRIVNQRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-- 317
G G T + HV DL+ + ++E +AA + ++N S R +T G+ A+A G
Sbjct: 171 GDGTTITQVGHVEDLAEAMARSLEV-DAACNRVYNCSSHRGITFRGLIAAAAKACGRELA 229
Query: 318 -VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+++ +DP A+KAFP R F+
Sbjct: 230 DLDLRSFDPSGLDPKARKAFPLRLSHFL 257
>gi|87124367|ref|ZP_01080216.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
gi|86167939|gb|EAQ69197.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
Length = 307
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 29/270 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH +T+ T G + + G + GD +
Sbjct: 7 GGTRFVGRPLVAALLAQGHALTLFTRGRQG---------------LPDGVEHCCGDRTKA 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
++ + G F+V++D++G+ LD R V D +FL++SSAG+Y +++ P E
Sbjct: 52 ADLQQLQGRRFEVIIDSSGRTLDDSRLVLDHTGRPS-HRFLYVSSAGVYAASEQWPLDED 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG E ++ + SFRP Y++G GN E WFF RI PVP+P
Sbjct: 111 SALDPASRHAGKAHTEAWLQAEGIPFTSFRPTYIVGPGNYNPIERWFFARIHHGLPVPVP 170
Query: 260 GSGMQFTNIAHVRDLSSML--TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-- 315
G G T + HV DL+ + +LAV +AA++ I+N S R +T +G+ A AAG
Sbjct: 171 GDGTTITQVGHVEDLAEAMVRSLAV---DAATNRIYNCSSRRGITFNGLVTAAALAAGKE 227
Query: 316 -LPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+++ +DP A+KAFP R F+
Sbjct: 228 PQSIDVRFFDPSGLDPKARKAFPLRISHFL 257
>gi|88808654|ref|ZP_01124164.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
gi|88787642|gb|EAR18799.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
Length = 307
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 136/268 (50%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH++T+ T G ++P + G ++ GD +
Sbjct: 7 GGTRFVGKPLVSRLLQQGHQLTLFTRG-------RQP--------LPDGVESCVGDRQDD 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ + G F+VV+D++G+ L + V + + +FL++SSAG+Y ++ P E
Sbjct: 52 TALEQLRGRRFEVVIDSSGRTLADSQKVIERTGAPS-HRFLYVSSAGVYAGSESWPLDEQ 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG + E ++ + SFRP Y++G GN E WFFDRIV RP+P+P
Sbjct: 111 SPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPGNYNPVERWFFDRIVHGRPIPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-- 317
G G T + HV DL+ + ++E +AA + I+N S R +T G+ A+A G
Sbjct: 171 GDGTTITQVGHVEDLAEAMARSLEV-DAACNRIYNCSSHRGITFRGLIASAAEACGRECA 229
Query: 318 -VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+++ +DP A+KAFP R F+
Sbjct: 230 DLDLRSFDPSGLDPKARKAFPLRLSHFL 257
>gi|148242110|ref|YP_001227267.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
gi|147850420|emb|CAK27914.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
Length = 306
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL SGH+V + T G K+P + G + + GD ++
Sbjct: 7 GGTRFVGRPLVGHLLRSGHQVCLFTRG-------KQP--------LPEGVEHIRGDRSDA 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ + G FDV++D++G+ L + V + + +++SSAG+Y P E
Sbjct: 52 EGLAALKGRQFDVIVDSSGRTLTDTQSVVAITGAP-RHRLVYVSSAGVYADNARLPLDES 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + SFRP Y+ G GN E WFFDRIV RPVPIP
Sbjct: 111 APTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL++ + +E +AA++ I+N VT G+ A+A G
Sbjct: 171 GDGTTITQLGHVEDLATAMARCLEV-DAAANRIYNCTDTHGVTFRGLVAAAARACGKDPE 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
VE+ +DP A+KAFP R F+
Sbjct: 230 QVELRSFDPSGLDPKARKAFPLRLTHFL 257
>gi|116074757|ref|ZP_01472018.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
gi|116067979|gb|EAU73732.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
Length = 335
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
AS+ K+L++ GG +G L L GH +T+ F R +
Sbjct: 23 ASSDALMKILVM----GGTRFVGKPLVASLQEQGHALTL---------------FTRGRQ 63
Query: 129 IVSAGGKTVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
AG V GD ++ + G FDV++D++G+ L + V + +FL++S
Sbjct: 64 PAPAGVDHVVGDRGNPNDLEQLSGHHFDVIVDSSGRTLADSQAVLAITGAPS-HRFLYVS 122
Query: 187 SAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
SAG+Y +D+ P E V P AG + E ++ + + SFRP Y++G GN E
Sbjct: 123 SAGVYAGSDQWPLDEDAAVDPASRHAGKAETEAWLLKEGIPFTSFRPTYIVGPGNYNPVE 182
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
WFFDR+ PVP+PG G T + HV DL+ + A+ +AA++ I+N S + +T
Sbjct: 183 RWFFDRVFHGLPVPMPGDGSTITQLGHVDDLADAMVRALAV-DAAANRIYNCSSRKGITF 241
Query: 304 DGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
G+ K A A G V++ H+DP A+KAFP R F+
Sbjct: 242 AGVVKAAALACGKDPEAVDVRHFDPSGLDPKARKAFPLRLSHFL 285
>gi|33240323|ref|NP_875265.1| mRNA binding protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237850|gb|AAP99917.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 300
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 48/274 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMT-------------VGDENSDKMKKPPFNRFNEIVS 131
GG +G L +L GH++TI T GD N D+++K
Sbjct: 2 GGTRFVGKALLGKLQEQGHDLTIFTRGVNSLPSNVRHIQGDRNGDEIEK----------- 50
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ G+ FDV++D++G+ D + V D +FL++SSAGIY
Sbjct: 51 ----------------LNGLKFDVIIDSSGRTKDQTKKVLD-ITGPPANRFLYVSSAGIY 93
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++ P E V ++ H+ + E ++ + + SFRP Y+ G+GN E+WFF+
Sbjct: 94 ADSETLPLTEDSKVDLESRHIGKAETENWLRLSKVPFTSFRPTYIYGAGNYNPIEKWFFE 153
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI+ RP+PIP G T + HV DL+ ++L++E E +++ I+N +A+T G+
Sbjct: 154 RILNDRPIPIPNEGNTITQLGHVNDLAEAMSLSLEK-EVSNNRIYNCSGKKAITFRGLIY 212
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
A A G +++ +DP A+K FP R
Sbjct: 213 SSALACGKDPNDIKLFSFDPSKIDKKARKIFPLR 246
>gi|260435772|ref|ZP_05789742.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
gi|260413646|gb|EEX06942.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
Length = 306
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 31/278 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G K P V AG +
Sbjct: 2 KILVM----GGTRFVGRPLVARLQAQGHALTLFTRG-------KNP--------VPAGVE 42
Query: 136 TVWGDPA--EVGNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD + E + + G +FDV++D++G K D+ R VA S +F+++SSAG+Y
Sbjct: 43 HLCGDRSSDEGLSALQGRSFDVIVDSSGRKQEDSSRVVA--ITGSPSHRFVYVSSAGVYA 100
Query: 193 PADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
++ P E P AG E ++ + + SFRP Y+ G GN E WFFDR
Sbjct: 101 DSELWPMDESSPTDPQSRHAGKADTEAWLRKEGIPFTSFRPTYIYGPGNYNPVERWFFDR 160
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IV RP+P+PG G T + HV DL+ + ++ +AA++ I+N + ++ G+ +
Sbjct: 161 IVHNRPIPLPGDGSTITQLGHVEDLAEAMARCIDV-DAAANRIYNCSGKQGISFRGLIRA 219
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
A A G +E+ ++P+ A+KAFP R F+
Sbjct: 220 AAVACGRDPDGLELRSFNPRDLDPKARKAFPLRLNHFL 257
>gi|78213396|ref|YP_382175.1| nucleotide sugar epimerase [Synechococcus sp. CC9605]
gi|78197855|gb|ABB35620.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9605]
Length = 301
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 27/269 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L GH +T+ T G K P V G + + GD +
Sbjct: 2 GGTRFVGRPLVARLQAQGHALTLFTRG-------KNP--------VPTGVEHLCGDRSSD 46
Query: 143 EVGNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
E + + G +FDV++D++G K D+ R VA S +F+++SSAG+Y +++ P E
Sbjct: 47 EGLSALQGRSFDVIVDSSGRKQEDSSRVVAITGGPS--HRFVYVSSAGVYADSEQWPLDE 104
Query: 202 GDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
P AG + E ++ + + SFRP Y+ G GN E WFFDRIV RP+P+
Sbjct: 105 SSPTNPQSRHAGKAETEAWLRKEGIPFTSFRPTYIYGPGNYNPVERWFFDRIVHSRPIPL 164
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP- 317
PG G T + HV DL+ + +E +AA++ I+N + ++ G+ + A A G
Sbjct: 165 PGDGSTITQLGHVEDLAEAMARCIEV-DAAANRIYNCSGKQGISFRGLIRAAAVACGRDP 223
Query: 318 --VEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+E+ ++P A+KAFP R F+
Sbjct: 224 DGLELRSFNPSDLDPKARKAFPLRLNHFL 252
>gi|78779189|ref|YP_397301.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9312]
gi|78712688|gb|ABB49865.1| mRNA binding protein-like protein [Prochlorococcus marinus str. MIT
9312]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L +LL H++ I T G+ K P N
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLNQSHDIDIFTRGN------KANPKNT---------N 42
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD + ++V +DVV D +G+ L+ + + + S K+++++SSAG+YK
Sbjct: 43 LIKGDRNNLESIVKLRNEKYDVVYDISGRELEQTKLLIENLADS-FKRYIYVSSAGVYKD 101
Query: 194 ADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
E P E D + D+ H V+ E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 102 NHELPLSEDDPIDQDSRHKGKVETENWLINQKIPFTSFRPTYIYGPGNYNKIENWFFERL 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ C
Sbjct: 162 FSNKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NYEKSKNNIYNCSGEKGVTIKGLIYFC 220
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
A+ GL + + +D + ++K FP R
Sbjct: 221 AKVLGLNQNEISLRTFDYQKLDPKSRKGFPIR 252
>gi|123968394|ref|YP_001009252.1| mRNA binding protein [Prochlorococcus marinus str. AS9601]
gi|123198504|gb|ABM70145.1| possible mRNA binding protein [Prochlorococcus marinus str. AS9601]
Length = 306
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 139/271 (51%), Gaps = 27/271 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K +R N +
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNYDIDIFTRGNKSNPEKTNLIKGDRNNSV----- 52
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 53 -----DILKLRNK----KYDVVYDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + PD+ H + E ++ + + SFRP Y+ G GN E WFF+R+
Sbjct: 103 SELPLSEVDPIDPDSRHKGKFETENWLKKQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
GL + + +D + ++K FP R
Sbjct: 222 NVLGLKQNEISLRTFDYQKLDPKSRKGFPIR 252
>gi|157413227|ref|YP_001484093.1| putative mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
gi|157387802|gb|ABV50507.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
Length = 309
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K + G
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNYDIDIFTRGNKSNPEKTN----------LIKGD 47
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 48 RNNSEDIVKLRNE----KYDVVFDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 103 CELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
GL + + +D + ++K FP R
Sbjct: 222 NVLGLNQNEISLRTFDYQKLDPKSRKGFPIR 252
>gi|126696196|ref|YP_001091082.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9301]
gi|126543239|gb|ABO17481.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9301]
Length = 306
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 136/273 (49%), Gaps = 31/273 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDK--MKKPPFNRFNEIVSA 132
K+L++ GG +G L +LL H++ I T G++ N +K + K N +IV
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNHDIDIFTRGNKSNPEKTNLIKGDRNNSEDIVKL 57
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
K +DVV D +G+ L+ + + +S ++++++SSAG+YK
Sbjct: 58 RNKK----------------YDVVYDISGRELEQTKLLIGNLDNS-FQRYIYVSSAGVYK 100
Query: 193 PADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R
Sbjct: 101 DNFELPLSEEDPIDPNSRHKGKFETENWLINQKIPFTSFRPTYIYGPGNYNKIENWFFER 160
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+
Sbjct: 161 LFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCM-NFENSKNNIYNCSGEKGVTIKGLIYF 219
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
CA GL + + +D + ++K FP R
Sbjct: 220 CANVLGLNKNEISLRTFDYQKLDPKSRKGFPIR 252
>gi|33865306|ref|NP_896865.1| nucleotide sugar epimerase [Synechococcus sp. WH 8102]
gi|33632475|emb|CAE07287.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 8102]
Length = 301
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G L L GH +T+ F R + G + + GD +
Sbjct: 2 GGTRFVGKPLVARLQAQGHALTL---------------FTRGRNALPEGVEHLSGDRSSS 46
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + + G FDV++D++G+ L+ R V + + +F+++SSAG+Y ++ P E
Sbjct: 47 EGLSPLEGRQFDVIVDSSGRKLEDSRRVVEITGAPS-HRFVYVSSAGVYAGSELWPLDET 105
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P+ AG E ++ + SFRP Y+ G GN E WFFDRI RPVP+P
Sbjct: 106 AATDPNSRHAGKADTEAWLRAEGIPFTSFRPTYIYGPGNYNPVERWFFDRITHDRPVPLP 165
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL+ + ++ EAA++ I+N + +T G + A A
Sbjct: 166 GDGSTITQLGHVDDLAEAMARCIDV-EAAANRIYNCSGKQGITFRGFIQAAAVACAKDPD 224
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
VE+ +DP A+KAFP R F+
Sbjct: 225 AVELRPFDPSGLDPKARKAFPLRLNHFL 252
>gi|254526226|ref|ZP_05138278.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
gi|221537650|gb|EEE40103.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
Length = 306
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K + G
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLIKNYDIDIFTRGNKSNPEKTN----------LIKGD 47
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 48 RNNSEDIVKLKNE----KYDVVFDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 103 CELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
GL + + +D + ++K FP R
Sbjct: 222 NVLGLNQNQISLRTFDYQKLDPKSRKGFPIR 252
>gi|397632209|gb|EJK70458.1| hypothetical protein THAOC_08181, partial [Thalassiosira oceanica]
Length = 255
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 168 RP-VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 226
RP +A + + K ++SSAG+Y P DE P E VK AG V+ E++ E+ +
Sbjct: 28 RPLIAQISGARNSKLLCYVSSAGVYLPVDEFPMPESTPVKETAGQVEYERHALESGIPFC 87
Query: 227 SFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
SFRPQY+ G +NK D +W+FDRIV+ P+PIP G Q ++ + D++S+L + +
Sbjct: 88 SFRPQYIYGEKSNKWDYIDWYFDRIVKGAPLPIPSPGSQKVSLTNSVDVASLLASVLNDE 147
Query: 286 EAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+AA+ + FN + V+ D +A +CA+AAGL +I HY+P+ K FPFR F
Sbjct: 148 KAAAEQVYFNCGTSNLVSYDEVASMCAEAAGLSAKIEHYNPEL----GKAKFPFRLTDF 202
>gi|159903505|ref|YP_001550849.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9211]
gi|159888681|gb|ABX08895.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9211]
Length = 323
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 32/289 (11%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
R +S+ FT K+L++ GG +G + LL HE+T+ T G+
Sbjct: 8 RHASIDMFT----CVNALKILVM----GGTRFVGKAIVDHLLIDKHEITLFTRGNN---- 55
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
P+ + KT D E G+ FDV++D +G+NL V AK+
Sbjct: 56 ----PYPNGVRHIKGDRKTSDIDKLE------GLKFDVIIDCSGRNLSETEDVI--AKTG 103
Query: 178 GVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYM 233
+ +F++ISSAGIY ++ P E + P++ H+ + E ++ + FRP Y+
Sbjct: 104 YPEHRFIYISSAGIYSYSESLPVEETSPIDPNSRHIGKAETESWLKNEGIPFTVFRPTYI 163
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G N E+WFFDRI + +P+P GM T + HV DL+ + ++++ + A + I+
Sbjct: 164 YGPSNYNPIEKWFFDRITYSQIIPLPDQGMGLTQLGHVADLARAIKVSLDY-KIAENKIY 222
Query: 294 NLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
N S +A+T G+ A+A+G + + ++ A+KAFP R
Sbjct: 223 NCSSAKAITFKGLVYAAAKASGSNKDELRLCSFNTSKLDPKARKAFPLR 271
>gi|33861354|ref|NP_892915.1| mRNA binding protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633931|emb|CAE19256.1| possible mRNA binding protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 306
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 29/272 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L +LL H++ I T G+ K P N
Sbjct: 2 KILVM----GGTRFVGKSLVSKLLNQNHDIDIFTRGN------KTNPDN---------TN 42
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD ++ ++ +DV+ D +G+ ++ + + + S + ++++SSAG+YK
Sbjct: 43 LIKGDRNDIECILKLKNKKYDVIFDISGREVEQTKLLIENLDDSFFR-YIYVSSAGVYKD 101
Query: 194 ADEPPHVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
E P E D G + E ++ E + SFRP Y+ G GN E WFF+R+
Sbjct: 102 NYELPLSEDSPLDTNSRHKGKFETENWLVEKKIPFTSFRPTYIYGPGNYNKIENWFFERL 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ +PIP G T + HV DLS ++ ++ E + ++I+N +R VT+ G+ LC
Sbjct: 162 FHLKSIPIPADGSLITQLGHVSDLSDVMIKCLD-FEKSKNSIYNCSGERGVTIKGLIYLC 220
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
A+ GL + + +D + ++K FP R
Sbjct: 221 AEVCGLNKTDIYLNKFDFEKLDPKSRKGFPIR 252
>gi|123966019|ref|YP_001011100.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9515]
gi|123200385|gb|ABM71993.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9515]
Length = 306
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 136/276 (49%), Gaps = 37/276 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVS 131
K+L++ GG +G L +LL +++ I T G+ EN++ +K
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIK------------ 45
Query: 132 AGGKTVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
GD + +++ +DV+ D +G+ L+ + + + S +++++SSAG
Sbjct: 46 -------GDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLMEILADS-FHRYIYVSSAG 97
Query: 190 IYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+YK E P E + P++ H + E ++ + + SFRP Y+ G GN E WF
Sbjct: 98 VYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWF 157
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F+R+ + +PIP G T + HV DLS ++ ++ E + +NI+N ++ VT+ G+
Sbjct: 158 FERLFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLD-FEKSKNNIYNCSGNKGVTIKGL 216
Query: 307 AKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFR 339
+CA+ GL + + +D + ++K FP R
Sbjct: 217 IYMCAEVCGLNKKDIFLNKFDFQKLDTKSRKNFPIR 252
>gi|72382045|ref|YP_291400.1| mRNA binding protein [Prochlorococcus marinus str. NATL2A]
gi|72001895|gb|AAZ57697.1| possible mRNA-binding protein [Prochlorococcus marinus str. NATL2A]
Length = 307
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG +G L LL GHE+ + T G+ EN +K +R N+
Sbjct: 9 GGTRFVGKSLVSNLLSKGHEIFVFTRGNLPVPENITHLKG---DRSND------------ 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPP 198
E + +FD+++D++G+ L+ + + K SG+ +F++ISSAG+Y P
Sbjct: 54 --EDLKKLSDHSFDLIVDSSGRKLEDTQRLL---KFSGLPSYRFIYISSAGVYDNTQLFP 108
Query: 199 HVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 255
E D+ G + E ++ + SFRP Y+ G GN E+WFFDRI R
Sbjct: 109 VGEDSPIDLASRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRS 168
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+P+P G T + HV DL+ + ++E + A++ I+N +AVT G+ + A G
Sbjct: 169 IPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSGRKAVTFKGLIETAILATG 227
Query: 316 LPV---EIVHYDPKAAGIDAKKAFPFRNMVFI 344
V ++ +DP A+K FP R + F
Sbjct: 228 NKVTDFDLRSFDPSKLDPKARKLFPLRLINFF 259
>gi|294782079|ref|ZP_06747405.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
gi|294480720|gb|EFG28495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
Length = 310
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+ L ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKFLEKNYKVYVLNRG------IRKNLDNAI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 50 KNI----SEMKNILKNIEVDVIIDISAYTEEQVEILQRVMKNK-FKQYILISSASIYTDI 104
Query: 195 DEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E D P G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEEDPTGENPAWGDYAKNKYLAEIKTIENSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + +FN+ D V
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-VFNISGDEYVA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ A++C + I H D + I A+ FPFR
Sbjct: 223 ITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFR 259
>gi|340753003|ref|ZP_08689796.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|422317135|ref|ZP_16398500.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
gi|229422791|gb|EEO37838.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|404590189|gb|EKA92658.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
Length = 310
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+LL ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRG------IRKNLDNVI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 50 KNI----SEMKNILKNIEVDVIIDISAYTEEQVEILQRVMKNK-FKQYILISSASVYTDI 104
Query: 195 DEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E D P KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEDDPTGENPAWSDYAKNKYLAEMRTIENSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + +FN+ D V
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-VFNISGDEYVA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ A++C + I H D + I A+ FPFR
Sbjct: 223 ITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFR 259
>gi|124025544|ref|YP_001014660.1| mRNA binding protein [Prochlorococcus marinus str. NATL1A]
gi|123960612|gb|ABM75395.1| possible mRNA binding protein [Prochlorococcus marinus str. NATL1A]
Length = 307
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 35/273 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG +G L LL GHE+ + T G+ EN +K +R N+
Sbjct: 9 GGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKG---DRSND------------ 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGV--KQFLFISSAGIYKPADEP 197
E + +FD+++D++G+ L D R + K SG+ +F++ISSAG+Y
Sbjct: 54 --EDLKKLSDHSFDLIVDSSGRKLADTQRLL----KFSGLPSYRFIYISSAGVYDNTQLF 107
Query: 198 PHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
P E + ++ H+ + E ++ + SFRP Y+ G GN E+WFFDRI R
Sbjct: 108 PVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGR 167
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
+P+P G T + HV DL+ + ++E + A++ I+N +AVT G+ A
Sbjct: 168 SIPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSGRKAVTFKGLIDTAILAT 226
Query: 315 GLPV---EIVHYDPKAAGIDAKKAFPFRNMVFI 344
G V ++ +DP A+K FP R + F
Sbjct: 227 GNKVTDFDLRSFDPSKLDPKARKLFPLRLINFF 259
>gi|323451761|gb|EGB07637.1| hypothetical protein AURANDRAFT_27287 [Aureococcus anophagefferens]
Length = 366
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 128/266 (48%), Gaps = 15/266 (5%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV 137
+IV GGH IG++LAK L +VTI V D ++ K + PF ++E+ +
Sbjct: 40 VIVQNKGGGHGEIGYHLAKALAAKDLDVTI--VQDASATK-EALPFKLYDELSATVAWCD 96
Query: 138 WGDPA--EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD A E V G+T V DN K+ P+ AKSS + F+SSAG+Y A
Sbjct: 97 MGDAAAVEKACAVDGLTH--VYDNFAKSPADAAPMMAAAKSSDA-FYAFVSSAGMYT-AK 152
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFS-NWASFRPQYMIGSGNNK-DCEEWFFDRIVRK 253
E V P G +VE + + W +FRPQY+ G NK D +WF +R R
Sbjct: 153 GILKEEKKVKDPPTGQREVELALEAELAGKWCAFRPQYIYGPYTNKRDYLDWFLNRAARD 212
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
P+ +P Q ++ H D+++++ V AA+ IFN +++ + D + A+A
Sbjct: 213 IPMAVPADAQQPVSLTHCEDVAALMASVVGKEGAAADQIFNCGTNKMCSYDDVCIAAAKA 272
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFR 339
G +V P D K +FPFR
Sbjct: 273 LGKSEALVVALPP----DTKSSFPFR 294
>gi|338746092|emb|CCC15095.1| putative chloroplast mRNA binding protein csp41 [Lepidodinium
chlorophorum]
Length = 223
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
A+K LI+ GGH IG++LA L G +VT++ +++ K P++ + E ++
Sbjct: 1 ADKGHALILQNKGGGHGEIGYHLALALEAKGLKVTML---QDSAAKKNMVPYSLYAEKLT 57
Query: 132 AGGKTVWGDPAE--------VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQF 182
+W DP + + G + DNN K+ + P+ A+ S K +
Sbjct: 58 -NTNIIWLDPKQGVSYLHQIASALKDGPPITHIFDNNSKDPKEIAPLLALARGSPRFKLY 116
Query: 183 LFISSAGIYKPADEPPHVE-GDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNK 240
FISSAG+Y + VE GDV P G +VE + +N WASFRPQY+ G NK
Sbjct: 117 SFISSAGMYTAKGQ--LVENGDVKDPPTGQRKVELSLEKNLPGRWASFRPQYIYGPYTNK 174
Query: 241 DCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+WF +R + P+ +PG Q N+AH D++ +L+ + +AA
Sbjct: 175 RGYLDWFLERAAQSLPMGVPGDASQPVNLAHCEDVAELLSSVIGKEQAA 223
>gi|358467521|ref|ZP_09177227.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067805|gb|EHI77891.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 310
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+LL ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRG------IRKNLDNAI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 50 KNI----SEMRNILKNIEVDVIIDISAYTEEQVEILQRIMKNK-FKQYILISSASVYTDI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEDSPTGENLAWGDYAKNKYLAEIRTLKNSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + IFN+ D +
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-IFNISGDEYIA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ A++C + I + + + I A+ FPFR
Sbjct: 223 VTEFAEICGKIMNKKSIIKYINTEEKKIKARDWFPFR 259
>gi|302873783|ref|YP_003842416.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|307689977|ref|ZP_07632423.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|302576640|gb|ADL50652.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
Length = 322
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSA 132
KK+VL++ GG IG + LL + + + + G E++DK
Sbjct: 2 KKQVLLM----GGSYFIGKKIVDILLDNDYSIYTLNRGTREDNDKR------------VI 45
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
K D E+ N++ FD+V+D + N + D +KQFLFISS+ +Y
Sbjct: 46 NLKCDRNDAEEMKNILSKYVFDIVIDVSALNRLQAEILYDSLNKENLKQFLFISSSAVYD 105
Query: 193 PAD-EPPHVEGDVVKPD-------AGHVQVEKYISENF----SNWASFRPQYMIGSGNNK 240
+ P+ E +K + A ++ E ++ E+F +N RP Y+ G N
Sbjct: 106 VENFSIPYNEETPLKENKYWTAYGANKIEAESFLIESFQQTKTNLIIIRPPYVYGENNYA 165
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E + F+ I RP+ IP SG + + DL++++ L + N + + +IFN+ + ++
Sbjct: 166 QRESFIFEHICSDRPIIIPNSGNTYLQFIYTTDLANII-LTLLNAKLDTISIFNVGNKKS 224
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
T+ + C AG I+ YD K + FPF
Sbjct: 225 FTIKEWIECCENVAGKKARIIEYDYKKYNRCVRDFFPF 262
>gi|407474175|ref|YP_006788575.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
gi|407050683|gb|AFS78728.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
Length = 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K VL++ GG + + +LAK L+G G+ V I+T G +K ++ F E +
Sbjct: 2 KSVLVM----GGTSFVSSFLAKHLIGQGYNVDILTRG------LKSIDYDGFREQLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K+ EV V+ G ++ V D + V + + +K+++F SS +Y+P+
Sbjct: 52 KS----KNEVQEVLEGRKYEFVFDISAYTKADVEILLTSIDKNELKKYVFCSSGAVYEPS 107
Query: 195 DEPPHVEGDVVKP--------DAGHVQVEKYISENFSN-----WASFRPQYMIGSGNNKD 241
D +K + G ++K +E+F + FRP Y+ G NN
Sbjct: 108 -------SDTIKESFKKGENSNWGKYGIDKKEAEDFIINSGIPYTIFRPPYIYGENNNLY 160
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E +FFDRI+ + +PIP T H+ DL + + N +SSNI+N+ + +
Sbjct: 161 REIYFFDRIINNKEIPIPFGKDTKTQFIHINDLVRIFESVMYN--ESSSNIYNVTNPELI 218
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+ D C + G + D ++++ FPFR++ ++
Sbjct: 219 SWDYFIAKCGEVIGKTPIMKKIDVNQVKLESRSYFPFRDVTYVL 262
>gi|218190586|gb|EEC73013.1| hypothetical protein OsI_06939 [Oryza sativa Indica Group]
Length = 812
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
H D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD I
Sbjct: 12 HAMQDAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFDTIC 64
>gi|262068102|ref|ZP_06027714.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
gi|291378188|gb|EFE85706.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
Length = 249
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAG 133
KK+L++ GG+ +G +AK+LL ++V ++ G N D++ + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRGIRRNLDEVI---------FLKAD 48
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
K + E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 49 RKNI----PEMKNILKNIEVDVIIDISAYTEEQVEILQRIMKNK-FKQYILISSASVYTD 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKD 241
E P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 104 ITESPAKEDSPTGENLAWGDYAKNKYLAEKRTIENSELYNFK-YTIFRPFYIYGVGNNLD 162
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E +FF RI P+ IP G ++ DL+S + LAVEN + IFN+ D V
Sbjct: 163 RENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-IFNISGDEYV 221
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK 326
+ A++C + I H D +
Sbjct: 222 AITEFAEICGKIMNKKSIIKHIDTE 246
>gi|222622705|gb|EEE56837.1| hypothetical protein OsJ_06446 [Oryza sativa Japonica Group]
Length = 899
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 41/46 (89%)
Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD
Sbjct: 3 DAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFD 48
>gi|340754760|ref|ZP_08691496.1| isoflavone reductase [Fusobacterium sp. D12]
gi|421500006|ref|ZP_15947029.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685769|gb|EFS22604.1| isoflavone reductase [Fusobacterium sp. D12]
gi|402269107|gb|EJU18453.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 312
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHTVFALNRGN------RKNVRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQEIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAKEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+LCA+A VEI ++ + A+ FPFRN+
Sbjct: 225 VELCAKAMKKAVEIRYFFLEDTKWKARDWFPFRNV 259
>gi|419840604|ref|ZP_14363992.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|386907547|gb|EIJ72254.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
Length = 312
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHAVFALNRGN------RKNIRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQEIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAKEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+LCA+A VEI ++ + A+ FPFRN+
Sbjct: 225 VELCAKAMKKAVEIRYFFLEDTKWKARDWFPFRNV 259
>gi|19704634|ref|NP_604196.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714936|gb|AAL95495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 38/280 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G +AK L + + ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIAKNFLEKDYTIYVLNRGTRKNIEGVFFLKVDRDNLI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E+ N++ + D+++D + + V + K+ G KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKDIEVDIIVDVSAYTEEQVDILHKVMKN-GFKQYILISSASVYNN 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKD 241
+ P EG + G KY++E NF + FRP Y+ G GNN D
Sbjct: 104 IECTPVNEGCQTGENLIWGDYAKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLD 162
Query: 242 CEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
E +FF RI P+ IP +QF +V DL+ + ++EN + + IFN+ D
Sbjct: 163 RENYFFSRIKYNLPIFIPSKNNIIQF---GYVEDLALAIESSIENSDFYNQ-IFNISGDE 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ A++C + I + + + I A+ FPFR
Sbjct: 219 YVTMSEFAEICGKVMAKKAVIKYVNTEENKIKARDWFPFR 258
>gi|340757555|ref|ZP_08694152.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
gi|251834819|gb|EES63382.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
Length = 317
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
GG+ +G L + LL ++V ++ G S +K + NR E E
Sbjct: 8 GGNQFVGKKLCEFLLNKKYKVYVLNRGTRPSPEKAEVLKCNRNIE-------------KE 54
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ + + D ++D + N + V + Q++ ISSA IY P E D
Sbjct: 55 LIECLENLRVDCIIDISAYNPEQVSLIQRIMAGRYC-QYILISSASIYNKMQNYPVKETD 113
Query: 204 VVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ G +KY+ E + N+ FRP Y+ G NN D E + F R+
Sbjct: 114 STGANEIWGKYAEDKYLCEKITIENSKKLKFNYTIFRPFYIYGPENNLDRESYIFARLEN 173
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
P+ IP G + ++ DL + +++NP + IFN+ D ++T+ K+C+
Sbjct: 174 NMPIFIPDKGEERIQFGYIDDLCEAVNFSLDNPHFFNQ-IFNISGDESITIKDYIKMCSL 232
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFI 344
+G I + D + + A+ FPFRN I
Sbjct: 233 ISGKQPLIYNIDLEKENLKARDWFPFRNKNLI 264
>gi|268609759|ref|ZP_06143486.1| dTDP-glucose 4,6-dehydratase [Ruminococcus flavefaciens FD-1]
Length = 304
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 33/280 (11%)
Query: 71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
A E +L+ +GG + A+ + GH V ++ NR N+
Sbjct: 2 AGEYMNILV----TGGTVFASRFTAEYFIEKGHNVYVL---------------NRGNDEQ 42
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
S G + D +G+ + FD VLD N V+ + D G ++ +SS+ +
Sbjct: 43 SVGALHIKADRHSLGDTLKKYRFDAVLDVTAYNAQDVKDLVDGLGEYGT--YVLVSSSAV 100
Query: 191 YKPADEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
Y P E + P++ + EKY++EN S++ RP Y+ G NN E
Sbjct: 101 YPETLPQPFSEDQKIGPNSIWGAYGKDKISAEKYVTENISDYYIIRPPYLYGPMNNVYRE 160
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ F+ R P +P G H+RD+ + + + E + I+N+ + V++
Sbjct: 161 AFVFECAERNMPFYLPKDGSMPLQFFHIRDMCRFMEILIT--EKPAERIYNVGNATTVSI 218
Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+C Q G E + P + I + FPF + +
Sbjct: 219 REWVTVCYQLCGKAPEFI---PVSGDIPQRNYFPFYDYAY 255
>gi|296327911|ref|ZP_06870446.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154867|gb|EFG95649.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 309
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 38/280 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G +AK L + + ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIAKNFLEKDYTIYVLNRGTRKNIEGVFFLKVDRDNLI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E+ N++ + D+++D + + V + K+ G KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKDIEVDIIVDVSAYTEEQVDILHKVMKN-GFKQYILISSASVYNN 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKD 241
+ P EG + G KY++E NF + FR Y+ G GNN D
Sbjct: 104 IECTPVNEGCQTGENLIWGDYAKNKYLAEKKTIENSNLYNFK-YTIFRAFYIYGIGNNLD 162
Query: 242 CEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
E +FF RI P+ IP +QF +V DL+ + ++EN + + IFN+ D
Sbjct: 163 RENYFFSRIKYNLPIFIPSKNNIIQF---GYVEDLALAIESSIENSDFYNQ-IFNISGDE 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ A++C + I + + + I A+ FPFR
Sbjct: 219 YVTMSEFAEICGKVMAKKAVIKYVNTEENKIKARDWFPFR 258
>gi|359411732|ref|ZP_09204197.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
gi|357170616|gb|EHI98790.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
Length = 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 26/279 (9%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG + LAK L+ G++V I+T G +K + + +
Sbjct: 2 KSILIM----GGTTFVSRCLAKYLIDQGYDVDILTRG------LKTIDYGGYKNHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K+ E+ V+ G ++ + D + + V + S +K+++F SS +Y
Sbjct: 52 KS----KNELQKVLNGRQYEFIFDISAYKKEDVEILLASIDRSSLKKYIFCSSGAVYTET 107
Query: 195 DE---PPHVEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSGNNKDCEEWF 246
++ GD P+ G+ +K +E+F + FRP Y+ G NN E +F
Sbjct: 108 NDFANESFERGD--NPNWGNYGTDKKEAEDFIVTSKIPYIIFRPTYIYGENNNLYREAYF 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
FDRI + +P+P T H+ DL + + N + I+N+ + V+ + +
Sbjct: 166 FDRIKESKVIPMPYGNNTVTQFIHIEDLVKVFESVMFNEKICR--IYNVTNSDIVSFEEL 223
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+C + + I D + ++ + FPFR++ ++
Sbjct: 224 ILMCGKVLKIDPIIKKIDTQKIKVNTRTYFPFRDVTYLL 262
>gi|422338333|ref|ZP_16419293.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372971|gb|EHG20310.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 309
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI+ GG+ +G + K+ LG + V ++ G R N
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLGKDYTVYVLNRG------------TRKNIEGVIFL 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
KT + E+ N + + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 46 KTDRDNYIEMKNTLKDIEVDVIVDVSAYTEEQVNILHKVMKNK-FKQYILISSASIYNNI 104
Query: 193 ---PADEPPH-----VEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
P +E + GD K A + +E NF + FRP Y+ G GNN D
Sbjct: 105 KCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI PV IP +QF +V DL+ + +++N + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPVFIPSKNNIIQF---GYVEDLALAIESSIDNSDFYNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ ++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFR 258
>gi|373497022|ref|ZP_09587563.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
gi|371964329|gb|EHO81853.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
Length = 316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G L + LL G+ V I+ NR N I G
Sbjct: 2 KKILLM----GGNQFLGKRLCEFLLDKGYTVYIL---------------NRGNRINPDGA 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + D ++ + ++ D ++D + D + + + Q++ ISSA IY
Sbjct: 43 EFLKCDRNIKDDLCKSLKDISIDYIVDISAYTRDQASLIQE-VMTGKYSQYILISSASIY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNK 240
P E D + G +KY+SE + + FRP Y+ G NN
Sbjct: 102 NDMKHIPAKETDNTGANEVWGKYAEDKYLSEKITIENAEKLNFKYTIFRPFYIYGPENNL 161
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D E + F R PV IP G + ++ DL + ++ N + + IFN+ +
Sbjct: 162 DRESYMFARFENNMPVFIPDKGEEIIQFGYIDDLCEAVNFSLGNSDFFNQ-IFNISGNER 220
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
+T+ A+LC+ I + D + + A+ FPFRN
Sbjct: 221 ITIKDYAELCSNICNKKPMIQYIDLEKENLKARDWFPFRN 260
>gi|260494255|ref|ZP_05814386.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336401276|ref|ZP_08582047.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
gi|260198401|gb|EEW95917.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336161186|gb|EGN64193.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
Length = 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V ++ G M+K N I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRG------MRK---NNEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + E+ NV+ + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFN---EMENVLKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ +++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFR 258
>gi|336418685|ref|ZP_08598957.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
gi|336164362|gb|EGN67269.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
Length = 309
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V + G M+K N I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYALNRG------MRK---NNEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + E+ NV+ + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFN---EMKNVLKNIDVDIIVDVSAYTERQVDILHKTMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ +++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFR 258
>gi|254302849|ref|ZP_04970207.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323041|gb|EDK88291.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 309
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI+ GG+ +G +AK+ L + V ++ G R N
Sbjct: 2 KKILIM----GGNQFVGKEIAKKFLEKNNTVYVLNRG------------TRKNIEGVIFL 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
KT + E+ N + + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 46 KTDRDNYIEMKNTLKDIEVDVIVDVSAYTEEQVNILHKVMKNK-FKQYILISSASIYNNI 104
Query: 193 ---PADEPPH-----VEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
P +E + GD K A + +E NF + FRP Y+ G GNN D
Sbjct: 105 KCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI PV IP +QF ++ DL + ++EN + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPVFIPSKNNIIQF---GYIEDLVLAIESSIENSDFYNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ ++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFR 258
>gi|126701231|ref|YP_001090128.1| hypothetical protein CD630_36040 [Clostridium difficile 630]
gi|254977233|ref|ZP_05273705.1| hypothetical protein CdifQC_18065 [Clostridium difficile QCD-66c26]
gi|255094562|ref|ZP_05324040.1| hypothetical protein CdifC_18181 [Clostridium difficile CIP 107932]
gi|255102821|ref|ZP_05331798.1| hypothetical protein CdifQCD-6_18561 [Clostridium difficile
QCD-63q42]
gi|255308640|ref|ZP_05352811.1| hypothetical protein CdifA_18761 [Clostridium difficile ATCC 43255]
gi|255316317|ref|ZP_05357900.1| hypothetical protein CdifQCD-7_18264 [Clostridium difficile
QCD-76w55]
gi|255518977|ref|ZP_05386653.1| hypothetical protein CdifQCD-_17798 [Clostridium difficile
QCD-97b34]
gi|255652157|ref|ZP_05399059.1| hypothetical protein CdifQCD_18365 [Clostridium difficile
QCD-37x79]
gi|260685125|ref|YP_003216410.1| hypothetical protein CD196_3396 [Clostridium difficile CD196]
gi|260688783|ref|YP_003219917.1| hypothetical protein CDR20291_3442 [Clostridium difficile R20291]
gi|306521884|ref|ZP_07408231.1| hypothetical protein CdifQ_20781 [Clostridium difficile QCD-32g58]
gi|384362801|ref|YP_006200653.1| hypothetical protein CDBI1_17660 [Clostridium difficile BI1]
gi|423082905|ref|ZP_17071487.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|423086428|ref|ZP_17074833.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|423089564|ref|ZP_17077921.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
gi|115252668|emb|CAJ70511.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211288|emb|CBA66856.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214800|emb|CBE07533.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|357546861|gb|EHJ28766.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|357546984|gb|EHJ28883.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|357558041|gb|EHJ39553.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
Length = 312
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG IG LAK L+ G+++ I+T G + D +N F E +
Sbjct: 2 KSILIM----GGSDFIGSALAKRLIKCGYQIDILTNGKKEID------YNGFKEHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K ++ N++ G +D + D + V + D+ +K+++ +S+ +YK +
Sbjct: 52 KV----RKDMENIITGRKYDYIYDMTAYTKEDVSNLIDFISMDNLKKYIVLSAGAVYKDS 107
Query: 195 DEPPHVEGDVV------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
E + K + E +I + + RP Y+ G NN E +FF+
Sbjct: 108 GRNIKEENEKGENENWGKYGLNKKEAEDFIINSPIPYIIIRPTYIYGENNNLYREYYFFE 167
Query: 249 RIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I + +P+P G Q +N ++ DL +L ++NP + +N+ + + ++ D +
Sbjct: 168 KIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIMKNPHVREA--YNVTNPQLISWDDLI 224
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
C + G I + D + + FPFRN+ F
Sbjct: 225 YTCGEIIGKEPIIKYVDMEKVEFRERTYFPFRNIDF 260
>gi|404367032|ref|ZP_10972408.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
gi|313689747|gb|EFS26582.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
Length = 316
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 35/280 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G L + LL G+ V I+ NR N I G
Sbjct: 2 KKILLM----GGNQFLGKRLCEFLLDKGYTVYIL---------------NRGNRINPDGA 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + D ++ + ++ D ++D + D + + + Q++ ISSA IY
Sbjct: 43 EFLKCDRNIKDDLCKSLKDISIDYIVDISAYTRDQASLIQE-VMTGKYSQYILISSASIY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNK 240
P E D + G +KY+SE + + FRP Y+ NN
Sbjct: 102 NDMKHIPAKETDNTGANEVWGKYAEDKYLSEKITIENAEKLNFKYTIFRPFYIYDPENNL 161
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D E + F R PV IP G + ++ DL + ++ N + + IFN+ +
Sbjct: 162 DRESYMFARFENNMPVFIPDKGEEIIQFGYIDDLCEAVNFSLGNSDFFNQ-IFNISGNER 220
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
+T+ A+LC+ I + D + + A+ FPFRN
Sbjct: 221 ITIKDYAELCSNICNKKPMIQYIDLEKENLKARDWFPFRN 260
>gi|237744159|ref|ZP_04574640.1| isoflavone reductase [Fusobacterium sp. 7_1]
gi|229431388|gb|EEO41600.1| isoflavone reductase [Fusobacterium sp. 7_1]
Length = 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V ++ G M+K N+ I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRG------MRK---NKEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + V+ + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFN---VMKKVLKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFFNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ +++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFR 258
>gi|421526822|ref|ZP_15973428.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
gi|402256930|gb|EJU07406.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
Length = 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 42/282 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K L + V ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKNFLEKDYIVYVLNRGTRKNIEGVFFLKADRNNYI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E N++ + D+++D + + V + K KQ++ ISSA +Y
Sbjct: 54 ---------ETENILKNIEVDIIVDVSAYTEEQVDILQKVMKDR-FKQYILISSASVYNS 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSN--WASFRPQYMIGSGNN 239
P +E + +++ D KY++E N N + +RP Y+ G GNN
Sbjct: 104 IESAPVNEESEIGENLIWGDYAK---NKYLAEQKTIENSNLYNFKYTIYRPFYIYGIGNN 160
Query: 240 KDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
D E +FF RI P+ IP +QF +V DL+ + ++ N + + IFN+
Sbjct: 161 LDRENYFFSRIKYDLPIYIPSKNNIIQF---GYVEDLALAIESSINNSDFYNQ-IFNISG 216
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
D VT+ ++CA+ I + D + I + FPFR
Sbjct: 217 DEYVTMSEFIEICAKVINKKTTIKYVDTAKSQIKVRDWFPFR 258
>gi|237742294|ref|ZP_04572775.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256845573|ref|ZP_05551031.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|421145378|ref|ZP_15605256.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|229429942|gb|EEO40154.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256719132|gb|EEU32687.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|395488227|gb|EJG09104.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 44/283 (15%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP Y+ G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFYIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N D E +FF RI P+ IP +QF +V DL+ + ++ N + + FN+
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSIGNSDFYNQT-FNIS 215
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
D VT+ +++C + I + + + I A+ FPFR
Sbjct: 216 GDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFR 258
>gi|373111975|ref|ZP_09526210.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|371656543|gb|EHO21868.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
Length = 264
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHTVFALNRGN------RKNVRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQKIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAEEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHY 323
+LCA+A VEI ++
Sbjct: 225 VELCAKAMKKAVEIRYF 241
>gi|34763307|ref|ZP_00144264.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887030|gb|EAA24145.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 309
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 50/286 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP Y+ G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFYIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAAS---SNIF 293
N D E +FF RI P+ IP +QF +V D L LA+E+ S + F
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVED----LVLAIESSIGNSDFYNQTF 212
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
N+ D VT+ +++C + I + + + I A+ FPFR
Sbjct: 213 NISGDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFR 258
>gi|325663799|ref|ZP_08152200.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470132|gb|EGC73366.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 303
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI +GG + + A+ + G+EV+++ NR + +G
Sbjct: 5 KRILI----TGGTVFVSKFAAEYFVKRGYEVSVL---------------NRGSRPQVSGV 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D ++ V+ G FD VLD + V+ + A+ G ++ ISS+ +Y
Sbjct: 46 EWICADRNQLNGVLQGKNFDHVLDITAYTKEDVKNLL--AELKGFSTYILISSSAVYPET 103
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K + ++ E+Y+ E + RP Y+ GS N+ E + F
Sbjct: 104 LPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAYVIRPPYLYGSMNDVYREAFVF 163
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
D ++ R +PG G Q HV DL ++ +E PE +IFN V + A+ +
Sbjct: 164 DCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRPE---EHIFN-VGNEAIDIRTF 219
Query: 307 AKLCAQAAGLPVEI 320
+LC QAAG P+ +
Sbjct: 220 VELCYQAAGEPLRV 233
>gi|423137043|ref|ZP_17124686.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961110|gb|EHO78753.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 309
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V ++ G M+K N+ I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRG------MRK---NKEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + +V + + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFNVMEKV---LKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
VT+ +++C + I + + + I A+ FPFR
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFR 258
>gi|331087319|ref|ZP_08336388.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408410|gb|EGG87881.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 301
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI +GG + + A+ + G+EV+++ NR + +G
Sbjct: 3 KRILI----TGGTVFVSKFAAEYFVKRGYEVSVL---------------NRGSRPQVSGV 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D ++ V+ G FD VLD + V+ + A+ G ++ ISS+ +Y
Sbjct: 44 EWICADRNQLNGVLQGKNFDHVLDITAYTKEDVKNLL--AELKGFSTYILISSSAVYPET 101
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K + ++ E+Y+ E + RP Y+ GS N+ E + F
Sbjct: 102 LPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAYVIRPPYLYGSMNDVYREAFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
D ++ R +PG G Q HV DL ++ +E PE +IFN V + A+ +
Sbjct: 162 DCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRPE---EHIFN-VGNEAIDIRTF 217
Query: 307 AKLCAQAAGLPVEI 320
+LC QAAG P+ +
Sbjct: 218 VELCYQAAGEPLRV 231
>gi|289765685|ref|ZP_06525063.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
gi|289717240|gb|EFD81252.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
Length = 300
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E+ NV+ + D+++D + V + K+ KQ++ ISSA +Y + P E
Sbjct: 45 EMKNVLKNIDVDIIVDVSAYTERQVDILHKTMKNR-FKQYILISSASVYNNIESTPVNED 103
Query: 203 DVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ G KY++E NF + FRP Y+ G GNN D E +FF RI
Sbjct: 104 SQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDRENYFFSRI 162
Query: 251 VRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
P+ IP + +QF +V DL+S++ ++EN + + FN+ + VT+ ++
Sbjct: 163 KYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEYVTMSEFSE 218
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+C + I + + + I A+ FPFR
Sbjct: 219 ICGKVMSKKAIIKYINTEEKKIKARDWFPFR 249
>gi|255657560|ref|ZP_05402969.1| hypothetical protein CdifQCD-2_18091 [Clostridium difficile
QCD-23m63]
gi|296452765|ref|ZP_06894454.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296879983|ref|ZP_06903953.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
gi|296258384|gb|EFH05290.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296428960|gb|EFH14837.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
Length = 312
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 24/276 (8%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG IG LAK L+ G+++ I+T G + D + F + +
Sbjct: 2 KSILIM----GGSDFIGSALAKRLIKCGYQIDILTNGKKEID------YKGFKKHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K ++ N++ G +D + D + V + D+ +K+++ +S+ +YK +
Sbjct: 52 KV----RKDMENIITGRKYDYIYDMTAYTKEDVSNLIDFISMDSLKKYIVLSAGAVYKDS 107
Query: 195 DEPPHVEGDVVKPDA-GHVQVEKYISENFSN-----WASFRPQYMIGSGNNKDCEEWFFD 248
E + + + G + K +E+F + RP Y+ G NN E +FF+
Sbjct: 108 GRNIKEENEKGENENWGKYGLNKKEAEDFVINSPIPYIIIRPTYIYGENNNLYREYYFFE 167
Query: 249 RIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I + +P+P G Q +N ++ DL +L ++NP + +N+ + + ++ D +
Sbjct: 168 KIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIMKNPHVREA--YNVTNPQLISWDDLI 224
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
C + G I + D + + FPFRN+ F
Sbjct: 225 YTCGEVIGKEPIIKYVDMEKVEFRERTYFPFRNIDF 260
>gi|167757222|ref|ZP_02429349.1| hypothetical protein CLORAM_02772 [Clostridium ramosum DSM 1402]
gi|365830095|ref|ZP_09371680.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
gi|167703397|gb|EDS17976.1| NAD dependent epimerase/dehydratase family protein [Clostridium
ramosum DSM 1402]
gi|365263849|gb|EHM93671.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
Length = 301
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 123 FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
NR N G K + GD +GN++ G FDVV D V+ + + +GVK +
Sbjct: 32 LNRGNRKQIEGVKLIKGDRHHLGNLLKGYDFDVVFDVTAYTKQDVKDLLEGL--NGVKDY 89
Query: 183 LFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIG 235
+ ISS+ +Y +P E V + + D G ++ E Y+ + RP Y+ G
Sbjct: 90 ILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYG 149
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFN 294
N E + F+ ++KR +P G HV DL ++ T+ ++P +I N
Sbjct: 150 PMQNVYREPFVFECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH---DHIMN 206
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+ + V ++ +LC Q G+P+ V+ + + F F N ++
Sbjct: 207 VGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVL 254
>gi|410725913|ref|ZP_11364201.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
gi|410601548|gb|EKQ56056.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
Length = 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++L+ +GG + Y+AK +EV ++ G +
Sbjct: 2 KRILV----TGGTVFVSKYVAKYFESKSYEVYVLNRGTKQQ---------------VENV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D + + + +FD V+D G N VR + D K ++FISS+ +Y
Sbjct: 43 KLICADRNNLKDCLVKYSFDAVIDVCGYNQKDVRNILDAL--GEFKDYIFISSSAVYPET 100
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+E P E + K ++ E+Y+ N RP Y+ G N E + F
Sbjct: 101 NEQPFSENQRIGLNSIWSKYGTDKIEAEEYLISRVPNAYILRPPYLYGPMQNLYREAFVF 160
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+ ++ R IP G HV DL ++ +EN +IFN+ + V ++
Sbjct: 161 ECALKNRKFYIPKDGKMKLQFFHVDDLCKVIEKILEN--HPKEHIFNVGNTEVVDINTFV 218
Query: 308 KLCAQAAGLPVEIVH 322
+LC + G P+E V+
Sbjct: 219 ELCYKVVGTPLEKVY 233
>gi|374626317|ref|ZP_09698730.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
gi|373914174|gb|EHQ46006.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 123 FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
NR N G K + GD +GN++ G FDVV D V+ + + +GVK +
Sbjct: 32 LNRGNRKQIEGVKLIKGDRHHLGNLLKGYDFDVVFDVTAYTKQDVKDLLEGL--NGVKDY 89
Query: 183 LFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIG 235
+ ISS+ +Y +P E V + + D G ++ E Y+ + RP Y+ G
Sbjct: 90 ILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYG 149
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFN 294
N E + F+ ++KR +P G HV DL ++ T+ ++P +I N
Sbjct: 150 PMQNVYREPFVFECALKKRSFYLPNGGKMLLQFFHVEDLCRLMETIIKKHPH---DHIMN 206
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+ + V ++ +LC Q G+P+ V+ + + F F N ++
Sbjct: 207 VGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVL 254
>gi|237735693|ref|ZP_04566174.1| dTDP-glucose 4,6-dehydratase [Mollicutes bacterium D7]
gi|229381438|gb|EEO31529.1| dTDP-glucose 4,6-dehydratase [Coprobacillus sp. D7]
Length = 301
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 123 FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
NR N G K + GD +GN++ G FDVV D V+ + + +GVK +
Sbjct: 32 LNRGNRKQIEGVKLIKGDRHHLGNLLKGYDFDVVFDVAAYTKQDVKDLLEGL--NGVKDY 89
Query: 183 LFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIG 235
+ ISS+ +Y +P E V + + D G ++ E Y+ + RP Y+ G
Sbjct: 90 ILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYG 149
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFN 294
N E + F+ ++KR +P G HV DL ++ T+ ++P +I N
Sbjct: 150 PMQNVYREPFVFECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH---DHIMN 206
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+ + V ++ +LC Q G+P+ V+ + + F F N ++
Sbjct: 207 VGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVL 254
>gi|294785138|ref|ZP_06750426.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
gi|294486852|gb|EFG34214.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
Length = 309
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 44/283 (15%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP + G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFNIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N D E +FF RI P+ IP +QF +V DL+ + ++ N + + FN+
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSIGNSDFYNQT-FNIS 215
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
D VT+ +++C + I + + + I A+ FPFR
Sbjct: 216 GDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFR 258
>gi|373857922|ref|ZP_09600661.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
gi|372452144|gb|EHP25616.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
Length = 326
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 29/283 (10%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK L++ GG +G + K L+ G++V +T G +KK +N+
Sbjct: 2 KKALVM----GGTEFVGMAILKGLISKGYQVDFLTRG------IKKVFIQGYNKHYICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + E+ + G+ +D + D + + V + K S + ++ F+SS +Y +
Sbjct: 52 K----NENEIKKCLSGIEYDYIFDISAYSRKDVEILLKSVKLSRITRYCFLSSGAVYTMS 107
Query: 195 DEPPHVEGDV-VKPDAGHVQVEKYISENF------SN---WASFRPQYMIGSGNNKDCEE 244
+ + P+ G ++K +E++ SN FRP Y+ G GNN E
Sbjct: 108 KNYLYENSERGTNPNWGMYGLDKKEAEDYLFNLSKSNGFPMVIFRPSYIYGEGNNLYRES 167
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
+FF RI+ +P+PIP +G + T H+ D+ ++ ++ N + +NL
Sbjct: 168 YFFHRILNNQPIPIPNTGKK-TQFIHINDVVDIILDSITNDKTVGE-AYNLTHPSEFEWI 225
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMVFI 344
++ + I+ D I ++ FPFR++ ++
Sbjct: 226 EFVEIIQKIVSKQTTILSVSQEDMNNLNITPRQFFPFRDITYL 268
>gi|326793078|ref|YP_004310899.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
gi|326543842|gb|ADZ85701.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
Length = 319
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 23/271 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + LAK ++ GH+V+I T G ++ ++ F K + +E+
Sbjct: 9 GGTEFVSEALAKYMIEKGHQVSIFTRG------VRPVKYSGFTAHYKGNRKCI----SEI 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE---PPHVE 201
+ G FD V D + L+ V + +S +K+++F SS +Y P++E +
Sbjct: 59 AFNIEGKAFDYVFDISAYTLEDVTNLFKVLDTSQLKRYIFCSSGAVYIPSEEVMDETFSK 118
Query: 202 GDVV---KPDAGHVQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
G+ K + +E Y+ E + RP Y+ G GNN E + F +I + +
Sbjct: 119 GENKNWGKYGLDKLAIEDYLFELYQAKGIPVTMLRPTYIYGPGNNLYRESYLFHQISKNQ 178
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
PV +P G ++ DL + A+ E A ++N+ VT + + A+
Sbjct: 179 PVLVP-EGDTRVQFLYIEDLVKLFEAAM-YEEKAIGQVYNVTHKEQVTYEEWVETAAKVM 236
Query: 315 GLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
G +I+ G+ ++ FPFR ++
Sbjct: 237 GKQAQIIKLKT-PEGMVSRMYFPFRECTYLL 266
>gi|373122412|ref|ZP_09536275.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
gi|371663489|gb|EHO28677.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
Length = 299
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVLI +GG + YLA+ + +EV ++ NR + S G
Sbjct: 2 KKVLI----TGGTVFVSRYLAEYYVAKKYEVYVL---------------NRNTKKQSQGV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++G V+ G+ FD+V+D + D V + + S ++ ISS+ +Y
Sbjct: 43 KLIQADRHDLGTVLHGIHFDIVVDTAYTSAD-VEMLLEALDSYT--DYILISSSAVYPEN 99
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E +V K ++ E + E N RP Y+ G NN E + F
Sbjct: 100 ASKPFKEDSIVNVNRFWGKYGTDKIEAEAKLMERNPNAYIIRPPYLYGQMNNVYREAFIF 159
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D + R +P +G HV DL + + +EN +IFN+ + V++
Sbjct: 160 DCALANRKFYLPHNGEMKLQFFHVHDLCRFIDILLENK--PRQHIFNVGNKDMVSIREWV 217
Query: 308 KLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMVF 343
+LC VE V+ YD I + F F + +
Sbjct: 218 ELCYHITNHQVEFVNVYD----DIKQRNYFCFNDYEY 250
>gi|291542750|emb|CBL15860.1| Nucleoside-diphosphate-sugar epimerases [Ruminococcus bromii L2-63]
Length = 300
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 40/258 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI +GG + Y A+ + G EV ++ NR + S G
Sbjct: 2 KILI----TGGTTFVSRYAAEHFVSKGEEVFVL---------------NRNSRPQSQGVH 42
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKP 193
+ D +GN FD++LD + ++ + SGV ++FISS+ +Y
Sbjct: 43 LINCDRLNLGNKFANEHFDLILDITAYTDEHIKALL----RSGVSFDDYIFISSSAVYPE 98
Query: 194 ADEPPHVEGDV-----VKPDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+ P E V D G + EKY+ + N RP Y G N E +
Sbjct: 99 TNPQPFAENQTCGKNSVWGDYGINKLNAEKYLLDTVQNAYILRPPYFYGMYENLYREAFP 158
Query: 247 FDRIVRKRPVPIPGSG---MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
FD + R IP +G +QF N++ DL + + +E + S++IFN+ + VT+
Sbjct: 159 FDCAILDRKFYIPENGDMKLQFFNVS---DLCKFIEIIIE--KHPSNHIFNVGNKETVTI 213
Query: 304 DGMAKLCAQAAGLPVEIV 321
+LC + AG VE V
Sbjct: 214 KEWVELCYKVAGREVEFV 231
>gi|116620378|ref|YP_822534.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223540|gb|ABJ82249.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 53/266 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL++ GG IG L +ELL GHEV ++ + K F R E + A
Sbjct: 2 KVLVI----GGTLFIGKALVEELLKEGHEVAVL-------HRKPKHDFGRRVENIMADRN 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ-------------- 181
GD + G FDVV DN V DW + + Q
Sbjct: 51 N--GDAMR--EALAGRRFDVVFDN----------VYDWERGTTAAQVEATIRACGDRLSR 96
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSN----WASFRP 230
++F+SS Y D H E D + PD + E+ + + +FRP
Sbjct: 97 YIFMSSVAAY--GDGLNHKESDPLAPDYHPIPYTSHKATTERMLFRMHATSGLPVVTFRP 154
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
++ G N E++F+DR+ RP+ IPG G + +V DL + + A++ P A
Sbjct: 155 PFVYGPRTNYYREQFFWDRLRAGRPIIIPGDGHRLMQFVYVNDLVTAMVKAMDEPRAVGE 214
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGL 316
FN+ + VT + + A+ A +
Sbjct: 215 -AFNIGDPKPVTQVELVEKLAKVANV 239
>gi|296242085|ref|YP_003649572.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
gi|296094669|gb|ADG90620.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
Length = 335
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-----DAGHVQV--E 215
N+DA + +A+ A GVK+F++ SS P D PP GD P D G ++ E
Sbjct: 90 NVDATKILAEQALKHGVKRFIYCSSTEAIGPVDNPP---GDEETPPNPQFDYGRSKLLAE 146
Query: 216 KYISENFSNWASF---RPQYMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTN 267
+ I E +N S+ RP + G GN D WF + K + GSG
Sbjct: 147 QKIKEIAANGLSYTIIRPSGLYGPGNVNDVSYWFITSFAKGGFFSKFKI---GSGETLIQ 203
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
AHV D++ L VE E + + +F L DRA T + + K+ ++ G P PK
Sbjct: 204 FAHVDDVAKGFALVVERLEKSENQVFILSEDRAYTYNEVYKILSEITGNPPPKYSLSPKM 263
Query: 328 AGI 330
A +
Sbjct: 264 AKL 266
>gi|336429706|ref|ZP_08609666.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002036|gb|EGN32161.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 344
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 34/261 (13%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
A K K+LI +GG + + A G GHEV ++ NR
Sbjct: 41 KAQNKMKLLI----TGGTVFVSKFTAAYFAGRGHEVYVL---------------NRGTRP 81
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK--QFLFISS 187
+ G + D +G+ + G+ FD V+D + + + +G+K ++ ISS
Sbjct: 82 QAEGVNLIKADRNSLGSALNGMYFDAVIDVCAYKEADINNLLN----AGIKFDDYVLISS 137
Query: 188 AGIY-----KPADEPPHVEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ +Y +P +E + + + D +G V E ++ + N RP Y+ G N
Sbjct: 138 SAVYPETLPQPFNERQPIGKNSIWGDYSSGKVGAEVCLTSRYPNAYVIRPPYLYGPMQNL 197
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E + F+ KR IPG G HV DL + + + E ++IFN+ + +
Sbjct: 198 YREPFVFECADLKRKFYIPGDGEMKLLFFHVEDLCRFIYIILR--EHPDNHIFNVGNTQP 255
Query: 301 VTLDGMAKLCAQAAGLPVEIV 321
V++ A+LC +AAG P+E V
Sbjct: 256 VSISTFAELCYRAAGAPLEKV 276
>gi|395007244|ref|ZP_10391006.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
gi|394314733|gb|EJE51600.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
Length = 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 55/294 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVL++ GG +G L + L+ G +VT +T G SD
Sbjct: 2 QKVLLL----GGSVFVGRALLQRLIAQGFDVTAVTRGLVQSD------------------ 39
Query: 135 KTVWG----------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK---- 180
WG D ++ + + G TFD V+D + + R A +G+
Sbjct: 40 ---WGAAHHIACDRRDAHQLASRLRGHTFDAVVDASCYGPEDCR-----ALLAGLHAMPT 91
Query: 181 QFLFISSAGIYKPADEP-PHVEGDVVKPDA--GHVQVEKYISENFSNWASF------RPQ 231
++ +SSA +Y+ + P P E D G +K +E +S RP
Sbjct: 92 TYVLLSSAAVYERSTAPLPFSEASPAHGDGIWGTYGRDKAAAETVLCASSIPRQFVVRPP 151
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y+ G GNN D E + + R + + P+ +P G + DL+ + ++ A +
Sbjct: 152 YIYGPGNNLDRERFVWARQLAQAPIFVPADGETLIQFVGIDDLTRAIVGFLDPQCAVAPG 211
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
I+NL S V+ + L Q AG +VH I A++ FPFR I
Sbjct: 212 IYNLASPTYVSFNQYIALLGQIAGRQSHVVHVSDST--IPAREYFPFRKAHLIL 263
>gi|163816636|ref|ZP_02207999.1| hypothetical protein COPEUT_02826 [Coprococcus eutactus ATCC 27759]
gi|158447893|gb|EDP24888.1| NAD dependent epimerase/dehydratase family protein [Coprococcus
eutactus ATCC 27759]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI +GG + Y A+ + G+EV ++ NR + G
Sbjct: 2 KKILI----TGGTVFVSRYAARYFVDKGYEVYVV---------------NRNSRPQVPGA 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++G+ + + FDVV D N + + + D S G Q++ ISS+ +Y
Sbjct: 43 KLIEADRHDLGDKLKDIYFDVVADITAYNAEDITDLCDSLGSFG--QYIMISSSAVYPEY 100
Query: 195 DEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+ P E + + E + + S+ RP Y+ G NN E + F
Sbjct: 101 GDQPFREDSERALNRYWGSYGTDKIAAEDALLDRVSDAYILRPPYIYGPMNNVYREAFVF 160
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D RP +PG G HV+DL ++ +E E ++I N+ + VT+
Sbjct: 161 DCARADRPFYLPGDGGMKLQFFHVKDLCILMERVIE--EKLETHIMNVGNVEPVTIKDWV 218
Query: 308 KLC 310
+C
Sbjct: 219 TMC 221
>gi|414153381|ref|ZP_11409708.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455763|emb|CCO07611.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 306
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 40/275 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++A+ LL +GHEV ++ S P + ++ DPA
Sbjct: 6 TGGAGFIGSHVAEALLAAGHEVYVIDNLAGGSTANLPPGVTFCRQDIT--------DPAV 57
Query: 144 VGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLFISS 187
VG +VG + V++ + G N+ + + + GV + +F SS
Sbjct: 58 VG-LVGEIKPRVIMHQAAQVAVPVSLRDPVFDAGVNIIGTLHLLEACRQHGVAKIVFASS 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS---ENFS-NWASFRPQYMIGSGNN 239
A +Y P E P +G+ VEKY++ E + W + R + G +
Sbjct: 117 AAVYGTPRCLPLDESHPAAPLSGYGVAKYAVEKYLAAYGELYGLRWTALRYANVYGPRQD 176
Query: 240 KDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
E F DR++R++P I G G Q + +V+D+++ LA+E I N+
Sbjct: 177 AQGEGGVVAIFIDRLLRRQPAVIFGDGQQTRDFVYVKDVAAANLLAMER---GDGRILNI 233
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+ RAVT+ + +L Q +E V+ P+ I
Sbjct: 234 STGRAVTVQQLYQLIRQQTASHLEPVYRPPRPGDI 268
>gi|408417962|ref|YP_006759376.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
gi|405105175|emb|CCK78672.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
Length = 310
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG G L + L+ +VT+ T N P N G
Sbjct: 3 KNILII----GGSYFAGRSLVEHLVVQ-KDVTLFTFNRGNI------PLNISRVTQLHGD 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
+T D + + + + +DV++D G D ++ V + +KQ++FISSA +Y
Sbjct: 52 RT---DSQSIKDNIPTMDWDVLIDFCGYAPDDIKKVIQ-SVPGNIKQYIFISSASVYDHS 107
Query: 193 ---PADEP------PHVE-GDVVKPDAGHVQVEKYISENFSN----WASFRPQYMIGSGN 238
P DE P E G+ + ++ E+ + + N W RP + G N
Sbjct: 108 SILPLDETTRTIETPQPELGEYAEYGLNKIKAEQLLEKECLNRSISWTILRPSIVYGKFN 167
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
E +FFD + + PV +P + + N V DL+ ++ +ENP +A + +FN VS
Sbjct: 168 YAPRENYFFDLLEKAEPVILPENNLALFNFIFVDDLAKIIIKCIENP-SARNQVFNTVSH 226
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
+ D + + ++ V
Sbjct: 227 EYFSYDTYVAMLEKVINKKIKTV 249
>gi|448542572|ref|ZP_21624734.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
gi|445707051|gb|ELZ58917.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
Length = 300
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEGDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V + AV AD V +++ISS Y A+ P EG
Sbjct: 62 AKLTVEPDAVFDCVAYTPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIPKREG 114
Query: 203 DVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNKDCEE 244
+ D Q ++ + E S N S RP + G + + +
Sbjct: 115 ETPLCDCTDEQATDDSDASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
M ++ A AAG VE+VH + AAG+ +R+
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
>gi|448306805|ref|ZP_21496708.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445597316|gb|ELY51392.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 46/282 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +ELL ++VTI G E D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVEELLEHEYDVTIFNRGSHDNPFETDDRVSHIEGDRTNDSALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + K++ A + D + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVA-YHPKDVQAATRIFD-----DCEAYVYVSSGAAYG-REELP 110
Query: 199 HVEGDV-VKPDAGHVQVEK-----------------YISENFSNWASFRPQYMIGSGNNK 240
EG+ ++P ++ +E N S RP + G +
Sbjct: 111 KREGETPLEPCTTEQAIDDSSDTYGNRKAEGDRAVFAAAEKGRNAMSVRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + A+V D++S L + E EA + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVLVPGDGTNIWHRAYVEDVASALRIVAERGEAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVH---YDPKAAGIDAKKAFPFR 339
TL+ + + A VEIVH ++ +A GID + +R
Sbjct: 229 TTLEELVDVIAAQLETDVEIVHAGQHELEAGGIDLEDYLLYR 270
>gi|448299940|ref|ZP_21489946.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
gi|445586800|gb|ELY41073.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
Length = 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 51/265 (19%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ++LL G++VTI+ G+ E +D++++ +R N+ ++ A TV
Sbjct: 8 GGTRFIGRHLVEDLLEHGYDVTILNRGNHENPFEGNDRVERVEGDRTNDSVLEAAASTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV----KQFLFISSAGIYKPA 194
DP V FD V A P D ++G+ + +++ISS Y +
Sbjct: 67 -DPDAV--------FDCV---------AYYP-KDVRAATGIFADCEAYVYISSGAAYG-S 106
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWA------------------SFRPQYMIGS 236
+E P EG+ Q E + N S RP + G
Sbjct: 107 EEIPKREGETALEACTSEQAVDEDGETYGNRKAEGDRAVVAAADEGVRAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +W+ DR+ R V +PG G + A+V D++S L E E + +N+
Sbjct: 167 HDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRTVAE--EGTAGEAYNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIV 321
R VTL+ M +L A VE+V
Sbjct: 225 DRRLVTLEEMVELIAAELDADVEVV 249
>gi|448582063|ref|ZP_21645567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
gi|445731711|gb|ELZ83294.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
Length = 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 41/261 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFN-EIVSAGGKTVW 138
GG IG +L ELL SG+ VTI G+ E+ +++ +R + E + TV
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDNPFEDDPRVQHVQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V FD V + AV AD V +++ISS Y K
Sbjct: 67 -DPDAV--------FDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGSEVIPK 111
Query: 193 PADEPPHVE--GDVVKPDAG------HVQVEKYISENFS---NWASFRPQYMIGSGNNKD 241
+E P + + D+G + ++ + E S N S RP + G + +
Sbjct: 112 RENETPLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S + + E EA + +N+ R V
Sbjct: 172 RLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
TL+ M ++ A AAG VE+VH
Sbjct: 230 TLEEMVQVIADAAGTDVEVVH 250
>gi|164686607|ref|ZP_02210635.1| hypothetical protein CLOBAR_00199 [Clostridium bartlettii DSM
16795]
gi|164604336|gb|EDQ97801.1| NAD dependent epimerase/dehydratase family protein [Clostridium
bartlettii DSM 16795]
Length = 312
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 109/264 (41%), Gaps = 22/264 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG LAK + H+V ++T G + + N S K + E+
Sbjct: 8 GGSDFIGKSLAKHFIKHQHKVDVLTTG--------RVDYEGVNRHFSCDRKNI----EEL 55
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + + D + + + +K+++ +SS+ +YK +++ +G+
Sbjct: 56 EKALKDNEYTYIYDMTVFLKSEIEDLFKFVNRDTLKKYVVLSSSVVYKESEKYISEDGEK 115
Query: 205 -VKPDAGH-----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
+ P G VQ E YI ++ + RP ++ G NN E +FFDRI + +P+
Sbjct: 116 ELNPAYGKYGIEKVQAEHYIIDSDIPYIIIRPTHIYGPENNLYRETYFFDRIREGKAIPV 175
Query: 259 PGSGMQ--FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
P + ++ D +L +N + I+N+ + + +T + C + G
Sbjct: 176 PSDRNEPVLNQFIYIDDFVRVLYSLTKNDKVRE--IYNVSTPQNITWKKFIETCGEVMGK 233
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRN 340
I + D I + FPF+N
Sbjct: 234 EPIIKYVDSDKIKIKERSYFPFKN 257
>gi|448549969|ref|ZP_21628574.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
gi|448559677|ref|ZP_21633751.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445711067|gb|ELZ62862.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445713017|gb|ELZ64798.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
Length = 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEGDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V + AV AD V +++ISS Y A+ P EG
Sbjct: 62 AKLTVEPDAVFDCVAYTPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIPKREG 114
Query: 203 DVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNKDCEE 244
+ D Q ++ + E S N S RP + G + + +
Sbjct: 115 ETPLCDCTDEQATDDSDASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
M ++ A AAG VE+VH + AAG+ +R+
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
>gi|284036051|ref|YP_003385981.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
gi|283815344|gb|ADB37182.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
Length = 315
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD 140
GG IG +L L+ +GH+VT+++ + ++ P+ ++ A +T
Sbjct: 7 GGTGHIGTFLVPRLVAAGHDVTVVS-------RRQRDPYQTHDDWQQVAFVALDRTELEK 59
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ G + +T D V+D LD+ R + D A + V+ FL + ++ + P
Sbjct: 60 QGKFGQAIADLTPDAVIDLISFELDSTRQLTD-ALTGRVRHFLHCGTIWVHGYNELVPVN 118
Query: 201 EGDVVKP-DAGHVQ---VEKYISE--NFSNWAS--FRPQYMIGSG-------NNKDCEEW 245
E D P DA ++ +E Y+ + + + S P +++G G N D
Sbjct: 119 ESDPRYPIDAYGLRKAAIETYLLQEVDLAELPSTVIHPGHIVGPGWTPITPAGNLDAR-- 176
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F ++ R V +P G++ + H D++ LA++NP A+ F+++S+RA+T G
Sbjct: 177 IFTKLATGREVLLPNQGLETLHHVHADDVALGFMLALDNPAASIGESFHILSERAMTWRG 236
Query: 306 MAKLCAQAAG 315
A+ A G
Sbjct: 237 YAQALATWYG 246
>gi|448625257|ref|ZP_21671024.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
gi|445749019|gb|EMA00465.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
Length = 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 35/258 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V + AV AD V +++ISS Y A+ P EG
Sbjct: 62 AKLTVEPDAVFDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIPKREG 114
Query: 203 DVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNKDCEE 244
+ D Q ++ + E S N S RP + G + + +
Sbjct: 115 ETPLCDCTDEQATDDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVH 322
M ++ A AAG VE+VH
Sbjct: 233 EMVEVIADAAGTDVEVVH 250
>gi|381181099|ref|ZP_09889935.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
gi|380767104|gb|EIC01107.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ +GG + Y+A E + +E + + NR N A
Sbjct: 2 KKLLV----TGGTVFVSKYVA-EYFSNKNEYEVFVL-------------NRNNHPQPANT 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++ + + FD+VLD N + V+ + + V ++F+SS+ +Y
Sbjct: 44 KLINLDRKDLQDKLKKYNFDIVLDITSYNKNDVQGI--YESVGDVPDYIFLSSSAVYPET 101
Query: 195 DEPPHVEGDVVK-----PDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+E P +E V D G ++ E+Y+ + RP Y+ G NN E + F
Sbjct: 102 EEQPFMENVKVGFNKFWKDYGMNKIEAEEYLRSVKPDSYIIRPPYLYGPENNVYREAFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
+ RP IP +G ++ DL ++ ++ +PE IFN+ ++ +V++
Sbjct: 162 ECAENNRPFYIPSNGDMKLQFFYIEDLCKIIEKIIKTHPEEK---IFNVGNEESVSIKEW 218
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
KLC + G V + + + I+ + F F N +
Sbjct: 219 VKLCYEVVGKDVIFKNVNEE---IEQRNYFSFYNYEY 252
>gi|292655031|ref|YP_003534928.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|448292667|ref|ZP_21483073.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|291370200|gb|ADE02427.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
[Haloferax volcanii DS2]
gi|445572423|gb|ELY26963.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
Length = 329
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 113/287 (39%), Gaps = 54/287 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------KPADE 196
V FD V + AV AD V +++ISS Y K DE
Sbjct: 62 AKLTVAPDAVFDCVAYKPAEVASAVDVFAD------VDAYVYISSGAAYGSEVIPKREDE 115
Query: 197 --------------------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
P EGD V +A + N S RP + G
Sbjct: 116 TLLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGI---------NAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +++ DR++ V +PG G + A+V D++S + + E EA + +N+
Sbjct: 167 DDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
R VTL+ M + A AAG VE+VH + AAG+ +R+
Sbjct: 225 DRRLVTLEEMVEAIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
>gi|56552270|ref|YP_163109.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543844|gb|AAV89998.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 317
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 21/239 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G YL L+ GHE+ ++ G N + + +++ I + + V +
Sbjct: 8 GGSGHVGSYLVPRLVELGHEIVNVSRGAANPYR-QHYAWSQVKNI--SLDRQVEEKTGQF 64
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G + + D+V+D L + + + + A V+ FLF SS +Y P E D
Sbjct: 65 GKKIAKLNPDIVIDMISFGLSSTQHLVE-ALRGKVEHFLFCSSIWVYGRYFSIPSTEADS 123
Query: 205 VKP----DAGHVQVEKYISEN--FSNW--ASFRPQYMIGSG-------NNKDCEEWFFDR 249
P G + E ++ + + + FRP +++G G N + E F
Sbjct: 124 PNPIDEYGRGKAESEAWLLQEARLTGFPATCFRPGHIVGEGWVPISPIGNANPET--FSL 181
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
I R + +P G++ + H D++ + LA+EN A+ +FN VS++A+ L G A+
Sbjct: 182 IARGDELVLPNLGLEMVHHVHADDVAQWIVLAIENRAASVGEVFNTVSEQAINLRGYAE 240
>gi|169261134|gb|ACA52215.1| chloroplast mRNA-binding protein precursor-like protein [Oenothera
elata subsp. hookeri]
Length = 91
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
Query: 63 SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS 101
S+FTV ASA EKKKVLIVNTNSGGHAVIGFY AKELL S
Sbjct: 54 SSFTVSASA-EKKKVLIVNTNSGGHAVIGFYFAKELLAS 91
>gi|293115818|ref|ZP_05793133.2| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
gi|292808328|gb|EFF67533.1| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
Length = 316
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
F VK + KK+L+ +GG + Y+A+ + G+EV ++ N
Sbjct: 8 FCVKENFM--KKILV----TGGTTFVSKYVAEYFVNVGYEVFVL---------------N 46
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLD----NNGKNLDAVRPVADWAKSSGVK 180
R ++ G K + GD +G V+ FDVV D N+ +D VR + +
Sbjct: 47 RNSKPQVQGVKLIEGDRHNLGGVLKDTFFDVVADITAYNDNDIIDFVRELGSF------D 100
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYM 233
Q++ ISS+ +Y P +E + + EK + E + RP Y+
Sbjct: 101 QYIMISSSAVYPEYGVQPFLEESEKSENKFWGSYGTDKIAAEKALLERVKDAYILRPPYL 160
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G NN E + FD + R +P G HV+DL ++ + ++ + I
Sbjct: 161 YGPMNNVYREAFVFDCALADRKFYLPKDGSMKLQFFHVKDLCRLMEVIIK--DKPQERIL 218
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
N+ + AV++ C ++ G + V+ I+ + F F N +
Sbjct: 219 NVGNVEAVSIKDWVTKCYESLGKIPDFVN---VYEDIEQRNYFSFYNYEY 265
>gi|448561303|ref|ZP_21634655.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
gi|445721535|gb|ELZ73203.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
Length = 383
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 41/261 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFN-EIVSAGGKTVW 138
GG IG +L ELL G+ VTI G+ E+ +++ +R + E + TV
Sbjct: 8 GGTRFIGRHLVSELLDGGYAVTIFNRGNHDNPFEDDPRVQHVQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V FD V + AV AD V +++ISS Y K
Sbjct: 67 -DPDAV--------FDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGREVIPK 111
Query: 193 PADEPPHVE--GDVVKPDAG------HVQVEKYISENFS---NWASFRPQYMIGSGNNKD 241
+E P + + D+G + ++ + E S N S RP + G + +
Sbjct: 112 RENETPLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S + + E EA + +N+ R V
Sbjct: 172 RLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRVV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
TL+ M ++ A AAG VE+VH
Sbjct: 230 TLEEMVQVIADAAGTDVEVVH 250
>gi|448605875|ref|ZP_21658468.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445741198|gb|ELZ92702.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 107/266 (40%), Gaps = 51/266 (19%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL +G+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDNGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY----------- 191
V FD V + AV AD V +++ISS Y
Sbjct: 62 AKLTVEPDAVFDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGSEVIPKRENE 115
Query: 192 ---------KPADE------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+ AD+ P EGD V +A + N S RP + G
Sbjct: 116 TALCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRDI---------NAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +++ DR++ V +PG G + A+V D++S + + E EA + +N+
Sbjct: 167 EDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVH 322
R VTL+ M ++ A AAG VE+VH
Sbjct: 225 DRRLVTLEEMVEVIADAAGTDVEVVH 250
>gi|456386837|gb|EMF52373.1| NAD-dependent epimerase/dehydratase [Streptomyces bottropensis ATCC
25435]
Length = 349
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 53/274 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-----RFNEIVSAGGK--- 135
+G IG Y+ +ELL G+ V VG +N K +P + R+ ++ G
Sbjct: 4 TGAAGFIGGYVVEELLARGYTV----VGLDNLSKYGRPARSLPDHPRYTPVIGDAGDRAL 59
Query: 136 -TVWGDPAE--VGN--VVGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
T D E + N ++GGV + D++ +NN A + ++ +++ +
Sbjct: 60 LTQLLDHCEHFIANAALIGGVRYMAELPLDILAENNRLVAGAAYAGIEAYRTGVLRKVTY 119
Query: 185 ISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN---------WASFRPQYM 233
+SS+ +++ ++ EGD ++ P A +K E ++ W RP
Sbjct: 120 VSSSMVFEKVEDGKIAEGDELEFPPPATAYGFQKLAVEYYAKAAWDQYALPWTIVRPFNC 179
Query: 234 IGSGNNK------DCEEW-----------FFDRIVRKR-PVPIPGSGMQFTNIAHVRDLS 275
+G+G + D E F +R +R+ P I G G QF H RD++
Sbjct: 180 VGAGERRTPHGGADPGEQRPLVQGHVIPDFAERALRRETPFRILGDGQQFRTFTHARDMA 239
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+ + LA+E EAA++ FNL T++ +A+L
Sbjct: 240 TGIVLAMEQ-EAATNEDFNLSGSYGCTIESLARL 272
>gi|399035188|ref|ZP_10732652.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
gi|398066886|gb|EJL58433.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
Length = 322
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVS-AGGKTVWGDP 141
GG +G YL L+ GH+V ++ G + KP P ++ I A +
Sbjct: 8 GGSGHVGSYLVPALVERGHQVVNVSRG------VAKPYRPCEAWSRIEHVALDRAAEEKF 61
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ G + + D+V+D +L + + V + A ++ +LF S+ +Y P E
Sbjct: 62 GQFGAKIAALEPDIVIDMIAFDLASTQQVVE-ALRGRIEHYLFCSTIWVYGRLFTMPSTE 120
Query: 202 GDVVKP-DA---GHVQVEKYISEN-----FSNWASFRPQYMIGSGNN-----KDCEEWFF 247
D P DA G + E ++ F FRP +++G G N + F
Sbjct: 121 ADPTNPIDAYGRGKAESEAWLMRQARVAGFPA-TCFRPGHIVGEGWNPINPIGNANPEIF 179
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I R + +P G++ + H D++ + A++N A+ +FN+VS++AVTL G A
Sbjct: 180 SQIARGDELVLPNLGLETVHHVHADDVARWIIAAIDNRAASIGEVFNIVSEQAVTLRGYA 239
Query: 308 K 308
+
Sbjct: 240 E 240
>gi|389846311|ref|YP_006348550.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|448616069|ref|ZP_21664779.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|388243617|gb|AFK18563.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|445750724|gb|EMA02161.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 43/262 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L +LL +G+ VT+ G+ ++ P +E + TV
Sbjct: 8 GGTRFIGRHLVSDLLDNGYAVTLFNRGNHDNPFEDDPRVQHIQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V G+ AV AD V +++ISS Y+ + P
Sbjct: 67 -DPDAV--------FDCVAYKPGEVASAVDIFAD------VDAYVYISSGAAYE-TEAIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNK 240
EG D Q E++ N S RP + G +
Sbjct: 111 KREGVTELCDCTDEQATGDTPESYGPRKAEGDRVVFEAASRGINAMSIRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ + +PG G + A+V D++S + + E E + +N+ R
Sbjct: 171 ERLDYWIDRVLNYDRIVVPGDGTNIWHRAYVEDVASAMRVIAEEGEPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
VTL+ M ++ A AAG VE+VH
Sbjct: 229 VTLEEMVEVIADAAGTDVEVVH 250
>gi|448574883|ref|ZP_21641406.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
gi|445732562|gb|ELZ84144.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L +LL +G++VT+ G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSDLLDNGYDVTLFNRGNHDN------PFADDPRVQHMQGDRADDEALRT 61
Query: 145 GNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ FD V + AV AD V +++ISS Y +E P EG
Sbjct: 62 AKLTADPDAVFDCVAYKPSEVASAVDIFAD------VDAYVYISSGAAYG-REEIPKREG 114
Query: 203 DVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEE 244
D Q E++ N S RP + G + + +
Sbjct: 115 VTPLCDCTDEQARDDSPESYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPHDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNHDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMVFIF 345
M ++ A AG VE+VH + A G+D +R +
Sbjct: 233 EMVEVIADVAGTNVEVVHAGERELAAGGLDPTDFVLYREYPHVL 276
>gi|169261136|gb|ACA52216.1| chloroplast mRNA-binding protein precursor-like protein [Oenothera
grandiflora]
Length = 91
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Query: 63 SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS 101
S+F V ASA EKKKVLIVNTNSGGHAVIGFY AKELL S
Sbjct: 54 SSFNVTASA-EKKKVLIVNTNSGGHAVIGFYFAKELLAS 91
>gi|309776442|ref|ZP_07671428.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915833|gb|EFP61587.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 308
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 34/271 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVL+ +GG + Y+A+ + + ++V ++ NR N+ G
Sbjct: 11 RKVLV----TGGTVFVSRYIAEYYVKNKYDVYVL---------------NRNNKTQPKGV 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D + N + FD+V+D D + + D S ++ ISS+ +Y
Sbjct: 52 TLIQADRHNLTNQLQNYHFDIVIDT-AYTSDEITKLLDALGSYD--DYILISSSAVYSEK 108
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E + K ++ E+ + E N RP Y+ G NN E + F
Sbjct: 109 TPQPFNEAAALAVNKYWGKYGTDKIEAEEALLERNPNAYILRPPYLYGPMNNVYREAFVF 168
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D + R +P +G HV DL + + +E S +IFN+ + +++
Sbjct: 169 DCALAGRTFYLPKAGEMKLQFFHVHDLCRFIDVLIE--IKPSQHIFNVGNKDTLSIRRWV 226
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
+LC Q G E V+ I+ K F F
Sbjct: 227 ELCYQVVGSQAEFVN---VYKDIEQKNYFSF 254
>gi|448613288|ref|ZP_21663168.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
gi|445740185|gb|ELZ91691.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
Length = 329
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 38/284 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L +LL +G+ VT+ G ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSDLLDNGYAVTLFNRGTHDN------PFEDDPRVQHVQGDRTDDNALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V G AV AD V +++ISS Y + P EG
Sbjct: 62 AKLTVEPDAVFDCVAYKPGDVASAVDIFAD------VDAYVYISSGAAYG-TETIPKREG 114
Query: 203 DVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEE 244
D Q E++ N S RP + G + + +
Sbjct: 115 VTDLCDCTDEQATDDSPESYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPHDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ + +PG G + A+V D++S + L E E + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRLVVPGDGTNVWHRAYVEDVASAMRLVAEEGEPGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMVFIF 345
M ++ A AAG VE+VH + AAG+D +R +
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAAGLDTTDFVLYREYPHVL 276
>gi|448590201|ref|ZP_21650169.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
gi|445734991|gb|ELZ86545.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
Length = 329
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 46/288 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L +LL G++VTI G+ ++ P +E + TV
Sbjct: 8 GGTRFIGRHLVSDLLDHGYDVTIFNRGNHDNPFADNPRVQHMQGDRADDEALRTAKLTVE 67
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D FD V N + AV AD V +++ISS Y + P
Sbjct: 68 PD----------AVFDCVAYNPSEVASAVDIFAD------VDAYVYISSGAAYG-REAIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNK 240
EG D Q E++ N S RP + G +
Sbjct: 111 KREGVTPLCDCTDEQASDDSPESYGPRKAEGDRVVFEAASRGINAMSIRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ V +PG G + A+V D++S + + E EA + +N+ +
Sbjct: 171 ERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVIAEEGEAGEA--YNVGDRQL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMVFIF 345
VTL+ M ++ A AG VE+VH + A G+D +R +
Sbjct: 229 VTLEEMVEVIADVAGTDVEVVHAGERELAAGGLDPTDFILYREYPHVL 276
>gi|254472988|ref|ZP_05086386.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
gi|211957709|gb|EEA92911.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
Length = 295
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEP 197
DP + V G ++ V+D + + D + G+ K+++ +SSA +YK
Sbjct: 38 DPFAMKQVAG--RYEAVIDTSAYTREQSEIAFD---TFGIHAKKWIHLSSAAVYKETKGH 92
Query: 198 PHVEGDVV------------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
E D + K +A H +++ + + RP Y+ G N+ D E++
Sbjct: 93 LPSEKDSIGGASVWGAYGRDKSEADHF----LLNQEHTPAVAIRPPYLYGPNNDIDREQF 148
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ R + +RP+ +PG G H DL+S + L + A + NL +T++
Sbjct: 149 VWARALTERPIILPGDGQTKLQFLHEEDLASFI-LYLLAMHAMPTEAVNLADPHILTIEK 207
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
++ + EI++ A GI A++ FPFR+
Sbjct: 208 WVRMLCDIVEVEPEIIYGKDMAPGIPAREYFPFRD 242
>gi|374333250|ref|YP_005083434.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
gi|359346038|gb|AEV39412.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
Length = 295
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVV------------KPDAGHVQVEKYISENFSNWAS 227
K+++ +SSA +YK E D + K +A H +++ + +
Sbjct: 75 KKWIHLSSAAVYKETKGHLPSEKDSIGGASVWGAYGRDKSEADHF----LLNQEHTPAVA 130
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP Y+ G N+ D E++ + R + +RP+ +PG G H DL+S + L + A
Sbjct: 131 IRPPYLYGPNNDIDREQFVWARALTERPIILPGDGQTKLQFLHEEDLASFI-LYLLAMHA 189
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
+ NL +T++ ++ + EI++ A GI A++ FPFR+
Sbjct: 190 MPTEAVNLADPHILTIEKWVRMLCDIVEVEPEIIYGKDMAPGIPAREYFPFRD 242
>gi|289582190|ref|YP_003480656.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|448282394|ref|ZP_21473681.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|289531743|gb|ADD06094.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|445576454|gb|ELY30909.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
Length = 328
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 110/269 (40%), Gaps = 42/269 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L ELL ++VT++ G + D++ +R N+ T+
Sbjct: 8 GGTRFIGRHLVSELLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAATI-- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP-- 197
DP V + V DV A R AD + +++ISS Y + P
Sbjct: 66 DPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPKR 111
Query: 198 ----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKDC 242
P D G + E + + N S RP + G + +
Sbjct: 112 ENETPLESCSPEEATDDSDATYGKRKAEGDRAIEAAANRGVNAMSVRPCIVYGPDDYTER 171
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+++ DR+ + V +PG G + A V D++S L + E+ EA + +N+ R VT
Sbjct: 172 LDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAEHGEAGEA--YNVGDQRLVT 229
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
LD M L A A V+IVH P+ AAG
Sbjct: 230 LDEMVDLIADALDTTVDIVHAGPRELAAG 258
>gi|448328965|ref|ZP_21518270.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
gi|445614863|gb|ELY68527.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
Length = 329
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 61/279 (21%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ++LL ++VTI FNR N + + D V
Sbjct: 8 GGTRFIGRHLVEDLLEHEYDVTI---------------FNRGN------SENPFADDDRV 46
Query: 145 GNVVGGVTFDVVLDNNGKNLD--------AVRPVADWAKS---SGVKQFLFISSAGIYKP 193
+V G T D L++ +D A P A + + ++++SS Y
Sbjct: 47 AHVEGDRTNDTALESAAMTVDPDAVFDCVAYHPKDVHAATRIFDDCEAYVYVSSGAAYGA 106
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA---------------------SFRPQY 232
+ P + ++P E+ + F + + RP
Sbjct: 107 EEIPKREDETTLEP----CSAEQATDDTFETYGNRKAEGDRAVFAAADNGIRAMAVRPPI 162
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G ++ + +W+ DR+ R V +PG G + V D++S L + E +A +
Sbjct: 163 VYGPHDHTERLDWWIDRVNRFDRVVVPGDGTNLRHRVFVEDVASALRIVAERGDAGEA-- 220
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
+N+ R VTL+ M L A++ V++VH P+ AAG
Sbjct: 221 YNVGDRRLVTLEEMVDLIAESLETSVDLVHAGPRELAAG 259
>gi|56965485|ref|YP_177218.1| RNA-binding protein [Bacillus clausii KSM-K16]
gi|56911730|dbj|BAD66257.1| RNA-binding protein [Bacillus clausii KSM-K16]
Length = 320
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VL++ GG +G ++L+ G+ V +T G ++ + + +
Sbjct: 2 KQVLVM----GGTEFVGKAFLQQLINLGYSVDFLTTG------RRRSTISGYTTHIKCNR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K +++ + + ++D + + + V + + ++++LF+SS +Y P+
Sbjct: 52 K----KRSDLTAALKHKQYHYIVDISAYDKEDVETLFLSMDHTKLERYLFLSSGSVYCPS 107
Query: 195 D-----EPPHVEGDVVKPDAGHVQVEKYISENF----SN---WASFRPQYMIGSGNNKDC 242
D + P E G + K +E+F +N + FRP Y+ G GNN
Sbjct: 108 DTIFLEDSPRGENS----HWGKYGLNKKEAEDFLISKANEIPFVIFRPPYIYGEGNNLYR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIA--HVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF + P+ IP S TN+ H+ D+ + EN A + +NL
Sbjct: 164 EAYFFYNMALGNPILIPESN---TNVQFIHIADVLRTILATFENRHAVCQS-YNLAHRET 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMVFI 344
+T + + P +I+ + K I +K+ FPFR++ ++
Sbjct: 220 ITWKSLMSTFKKITNSPSKIIEVEQKFLTENEIGSKQFFPFRDVSYL 266
>gi|291301968|ref|YP_003513246.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
gi|290571188|gb|ADD44153.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
Length = 316
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + IG + + L G EVTI + G K F + ++ G GD A V
Sbjct: 7 GGTSFIGRTIVETALLRGDEVTIFSRG-----KTGAALFPKVPRLI---GDRETGDYAAV 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP----------- 193
+ +D V+D + V D A S V ++LFISS +Y P
Sbjct: 59 ADG----EWDAVVDVSAILPRQVDQAMD-ALSGRVGRYLFISSHAVYSPEGAVPDSDESA 113
Query: 194 ADEPPHVEGDVVKPDA-GHVQV--EKYISENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
A +PP D + + G ++V E + + F A+ RP + G +N+D ++ R
Sbjct: 114 ARKPPLARADEIDNETYGRLKVGCEDAVLKRFGAGATIVRPGRVAGPYDNQDVFTYWVRR 173
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLT--LAVENPEAASSNIFNLVSD-RAVTLDGM 306
R V +P Q + RDL+ ++ LA + P A FN V VT G+
Sbjct: 174 AARGGKVALPADPRQPVQVVDSRDLARLVVRLLADDRPGA-----FNAVGPAEPVTFAGL 228
Query: 307 AKLCAQAAGLPVEIVHYDPKAA 328
++CA AAG VEIV +AA
Sbjct: 229 IEICAAAAGSRVEIVPVPAEAA 250
>gi|326203132|ref|ZP_08192998.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
gi|325986778|gb|EGD47608.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
Length = 339
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 33/264 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DP 141
GG IG + +LL +T+ + D NS + +G + + G D
Sbjct: 7 GGSKFIGLSIINKLLEMESSITVFNLEDSNS-------------MSVSGVRHIRGNRKDH 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--------- 192
A V + FDV++D G + V + + +KQ++F S+ +Y
Sbjct: 54 ALVRKLFEKEQFDVIIDTCGFEPEDVNIFIELF-GNKIKQYIFCSTVSVYDFDKIKSFPI 112
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-RPQYMIGSGNNKDCEEWFF 247
P P + ++ + EK + N + RP Y+ G D E+FF
Sbjct: 113 KEDFPLKTDPESWNNEIRYGSKKALCEKVLMSNGKFPVTIIRPCYVYGPNAYGDRVEFFF 172
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+RI +R VPI G ++ DL+ + AV N + A + I+N + + T+
Sbjct: 173 NRIGDERIVPILPIGNNVMQFIYISDLADLFVSAVNN-QKAYNRIYNAAGEESTTIFNFI 231
Query: 308 KLCAQAAGLPVEIVHYD-PKAAGI 330
LC + G I +D K GI
Sbjct: 232 NLCEEIIGKKANIRVFDAEKLTGI 255
>gi|223984220|ref|ZP_03634368.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
gi|223963835|gb|EEF68199.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
Length = 261
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------------KP 193
+ G TFD V+D +G N + + + VK ++FISS+ +Y +P
Sbjct: 3 QTLKGRTFDAVIDVSGLNQKQIEICCE-SLDCSVKHWIFISSSAVYDVDRCALPILETEP 61
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E P+ A + + ++ + RP YM G N E + FD ++
Sbjct: 62 LGENPYWGQYGTDKIAAESALTAFCQKHNIALSILRPPYMYGEYNYVQRESFIFDHLMHN 121
Query: 254 RPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+P+ IP + +QF + DL+ ++T + P+ ++N+ + V+ + CA
Sbjct: 122 QPILIPAADNRIQF---CYTGDLAKIVTTLLACPKQGIE-VYNVGDQQGVSFSEWIQQCA 177
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
G +I+ A AK FPFR+
Sbjct: 178 DVCGTQAKII--PVHDANWKAKDYFPFRD 204
>gi|448347316|ref|ZP_21536188.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
gi|445630717|gb|ELY83977.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
Length = 329
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVVDLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R AD + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFAD------CEAYVYVSSGAAYG-HEEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ Q +E++ N + RP + G +
Sbjct: 111 KREGETPLHSCTTEQATDDSAESYGNRKAEGDRAVFAAADDGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
VTL+ M L + VEIVH P+ AAG + +P
Sbjct: 229 VTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPL 268
>gi|448355174|ref|ZP_21543927.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
gi|445635939|gb|ELY89104.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
Length = 329
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +LL ++VT++ G + D++ +R N+ + A T+
Sbjct: 8 GGTRFIGRHLVSDLLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAAATI- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP- 197
DP V + V DV A R AD + +++ISS Y + P
Sbjct: 67 -DPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPK 111
Query: 198 -----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKD 241
P D G + E + ++ N S RP + G + +
Sbjct: 112 RENETPLESCSPEAATDDSDATYGKRKAEGDRAIEAAADRGVNAMSVRPCIVYGPDDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ + V +PG G + A V D++S L + E EA + +N+ + V
Sbjct: 172 RLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAERGEAGEA--YNVGDRQLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
TLD M L A A G V++VH P+ AAG
Sbjct: 230 TLDEMVDLIADALGTTVDVVHAGPRELAAG 259
>gi|448341771|ref|ZP_21530727.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
gi|445626900|gb|ELY80233.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
Length = 329
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++F+SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFED------CEAYVFVSSGAAYG-REEIP 110
Query: 199 HVEGDV-----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ A E Y ++N + RP + G +
Sbjct: 111 KREGETPLHPCTAEQATDDSAESYGNRKAEGDRAVVAAADNGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
VTL+ M +L + VE+VH P+ AAG + +P
Sbjct: 229 VTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDYPL 268
>gi|397774357|ref|YP_006541903.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
gi|397683450|gb|AFO57827.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
Length = 329
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++F+SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFED------CEAYVFVSSGAAYG-REEIP 110
Query: 199 HVEGDV-----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ A E Y ++N + RP + G +
Sbjct: 111 KREGETPLHPCTAEQATDDSAESYGNRKAEGDRAVVAAADNGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
VTL+ M +L + VE+VH P+ AAG + +P
Sbjct: 229 VTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDYPL 268
>gi|448363311|ref|ZP_21551912.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445646510|gb|ELY99496.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 329
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 39/264 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG L +LL G++VT++ G + D++ +R N+ + +
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFVDEDRVDHIEGDRTND-SALEAAVMTA 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DPA V + V DV A R AD A ++++SS Y D P
Sbjct: 67 DPAAVFDCVAYQPRDVQA--------ATRIFADCAA------YVYVSSGAAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
++P +A Y +E N S RP + G +
Sbjct: 113 ENETPLEPCTREEATDDTTATYGKRKAEGDRAIAAAAERGVNAMSVRPCIVYGPHDYTAR 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+++ DR+ R + IPG G + A+V D++S L L E A+ +N+ R VT
Sbjct: 173 LDFWIDRVNRFDRILIPGDGTNIWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK 326
++ M L A A V+IVH P+
Sbjct: 231 IEEMIDLIADALETTVDIVHAGPR 254
>gi|448694126|ref|ZP_21696947.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445785615|gb|EMA36402.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 46/284 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ELL +EVT+ G+ + D++ +R ++ + A G+ V
Sbjct: 8 GGTRFIGRHLVDELLAHDYEVTLFNRGNHENPFADDDRVDHVEGDRTDDDALEAAGREV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V + V DV A R AD + ++++SS Y K
Sbjct: 67 -DPDAVFDCVAYYPDDVRT--------ATRIFAD------CEAYVYVSSGAAYGREDIPK 111
Query: 193 PADEPPHVE------GDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKD 241
DE P E D G+ + E +EN N S RP + G + +
Sbjct: 112 REDETPLAECTAEQATDDSHATYGNRKAEGDRAVFEAAENGVNAMSLRPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V IPG G + +V D++S L + E E + +N R V
Sbjct: 172 RLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASALRIVAERGEPGEA--YNTGDRRLV 229
Query: 302 TLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
T++ M +L A + VE+VH P+ A GI+ + +R
Sbjct: 230 TIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELEDYPLYRE 273
>gi|336255178|ref|YP_004598285.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335339167|gb|AEH38406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 329
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +ELL ++VTI G+ + D++ +R NE + A TV
Sbjct: 8 GGTRFIGRHLVEELLAHEYDVTIFNRGNHENPFADDDRVDHVEGDRTNESALEAAAMTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A AD +++ISS Y D P
Sbjct: 67 -DPDAVFDCVAYQPRDVRA--------ATTIFAD------CDAYVYISSGAAYGREDIPK 111
Query: 199 HVEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKD 241
+ ++P A E Y +E N + RP + G + +
Sbjct: 112 REDETPLEPCTADQATDDSQETYGNRKAEGDRAVFAAAEEGVNAMAVRPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ V +PG G + +V D++S L + E E S +N+ R V
Sbjct: 172 RLDFWIDRVNEYDRVIVPGDGTNVWHRVYVEDVASALRIVAERGE--SGEAYNVGDRRIV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK 326
TL+ M +L A A V+IVH P+
Sbjct: 230 TLEEMVELIADALETSVDIVHAGPR 254
>gi|448378891|ref|ZP_21560887.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
gi|445665914|gb|ELZ18587.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
Length = 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L ELL ++VT+ T G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVAELLDHDYDVTLFTRGTRENPFADDDRVTHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRIFTD------CEAYVYVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ + Q E + N + RP + G +
Sbjct: 111 KREGETPLHECTPDQATDDSFETYGNRKAEGDRAAFAAADDGVPAMVVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ W+ DR+ R V +PG G ++ +V D+++ L + E + + +N+ R
Sbjct: 171 ERLNWWIDRVNRFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGDPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
V L+ + L A A VEIVH P+ AAG + + +P
Sbjct: 229 VPLEELVDLLADALETDVEIVHAGPRELAAGEISLEDYPL 268
>gi|229818903|ref|YP_002880429.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229564816|gb|ACQ78667.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 342
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 26/262 (9%)
Query: 68 KASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM--KKPPFNR 125
+ +A +VL + GG+ I ++ + GH++T++ G + +PP
Sbjct: 3 RVAAMAALRVLFI----GGNGTISAASSRLAIERGHDLTLLNRGVSAASDTPDARPPIEG 58
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV-KQFLF 184
+V G DP + V G +DVV+ N ++ + AD GV Q+++
Sbjct: 59 ARSLVGDAG-----DPDSIRAAVAGQEWDVVV--NFRSFSPEQAAADVEIFDGVVGQYVY 111
Query: 185 ISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENF--SNWAS-------FRPQYMI 234
ISSA Y KP + P E +K K SE W RP +
Sbjct: 112 ISSASAYAKPVEHLPITESTPLKNPFWQYSRNKIASEEVLVRAWRERDFPATIVRPSHTY 171
Query: 235 GSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
+ W DR+ R PVP+ G G + H RD + + + A + F
Sbjct: 172 DERSIPIPGRWTAIDRLRRGAPVPVVGDGTSLWTLTHTRDFAVAF-VGLLGDRRAVGDTF 230
Query: 294 NLVSDRAVTLDGMAKLCAQAAG 315
++ SD ++T + ++ A+AAG
Sbjct: 231 HITSDESLTWAQITRILARAAG 252
>gi|448390518|ref|ZP_21566141.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
gi|445666932|gb|ELZ19584.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
Length = 329
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 111/269 (41%), Gaps = 41/269 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L +ELL ++VTI+ G + D++ + +R NE T
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTILNRGSHENPFADDDRVDRVEGDRTNEAALEAAATTV- 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DP V + V DV +A R AD + ++++SS Y D P
Sbjct: 67 DPDAVFDCVAYQPRDV--------REATRIFAD------CEAYVYVSSGSAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
++P A +E Y +E N S RP + G + +
Sbjct: 113 ENETPLEPCTPDQATDDSMETYGNRKAEGDRAVFAAAEQGVNAMSVRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+W+ DR+ R V +PG G + A+V D++S L + E E + +N+ R VT
Sbjct: 173 LDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGEPDEA--YNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
L M +L A VEIV P+ AAG
Sbjct: 231 LAEMVELIADRLETDVEIVTAGPRELAAG 259
>gi|448365901|ref|ZP_21554155.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
gi|445654510|gb|ELZ07361.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
Length = 329
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 43/266 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG L +LL G++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFADEDRVDHIEGDRTNDSALEAAAMT-- 65
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A R AD +++ISS Y D P
Sbjct: 66 ADPDAVFDCVAYQPRDVQA--------ATRIFADCGA------YVYISSGAAYGREDIPK 111
Query: 199 HVEGDV-----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ +A +E Y +E N S RP + G +
Sbjct: 112 R-EGETPLESCTPEEATDDTMETYGKRKAEGDRAIAAAAERGVNAMSVRPCVVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+++ DR+ R + IPG G + A+V D++S L L E A+ +N+ R
Sbjct: 171 ARLDFWIDRVNRFDRILIPGDGTNVWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK 326
VT++ M L A A V++VH P+
Sbjct: 229 VTIEEMIDLIADALETTVDVVHAGPR 254
>gi|284166451|ref|YP_003404730.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
gi|284016106|gb|ADB62057.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
Length = 329
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 110/269 (40%), Gaps = 41/269 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L +ELL ++VTI+ G + D++ + +R NE T
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTILNRGSHENPFVDDDRVDRVEGDRANEAALEAAATTI- 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DP V + V DV +A R D + ++++SS Y D P
Sbjct: 67 DPDAVFDCVAYQPRDV--------REATRIFED------CEAYVYVSSGSAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
+ ++P A E Y +E N S RP + G + +
Sbjct: 113 EDETPLEPCTPDQATDDSSESYGNRKAEGDRAVFAAAEQGVNAMSVRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+W+ DR+ R V +PG G + A+V D++S L + E E + +N+ R VT
Sbjct: 173 LDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGEPGEA--YNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
L M +L A +EIV P+ AAG
Sbjct: 231 LAEMVELIADRLATDIEIVTAGPRELAAG 259
>gi|441150189|ref|ZP_20965455.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440619336|gb|ELQ82386.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 322
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 32/260 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + +G + ++ L +G EVT+ G N D F R ++ G GD
Sbjct: 7 GGTSFVGRAIVEDALRTGAEVTLFGRGRTNPDL-----FPRLTRLI---GDRDTGD---- 54
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ +D V+D +G V D A V ++LFISS +Y+ P + D
Sbjct: 55 HTALRAGAWDAVVDVSGYVPRHVGQAMD-ALGDRVGRYLFISSHAVYERTGLAPGSDEDT 113
Query: 205 -VKPDAGH-------------VQVEKYISENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
+P H V E ++ + A+ RP + G ++ D ++ R
Sbjct: 114 PRRPPVRHTEELSEATYGPLKVACEDDVTARYGARATIVRPGKVAGPHDSMDTFTYWVRR 173
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAK 308
R V +PG Q + RDL+ ++ + + + F V TL G+ +
Sbjct: 174 AARGGRVALPGDPEQPVQVVDSRDLARLVVRLITDDRPGA---FQAVGPAEPTTLGGLIR 230
Query: 309 LCAQAAGLPVEIVHYDPKAA 328
CA+AAG VEIV P+ A
Sbjct: 231 TCARAAGTEVEIVPVPPEGA 250
>gi|293402453|ref|ZP_06646589.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304116|gb|EFE45369.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 313
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 34/276 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVLI +GG + Y+A+ + ++V ++ NR ++ S G
Sbjct: 16 KKVLI----TGGTVFVSRYIAEYYVKKHYDVYVL---------------NRNSKEQSKGV 56
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D +GN++ FDVV+D + D + + A + ++ ISS+ +Y
Sbjct: 57 KLIQADRHNLGNLLRDFHFDVVIDTAYTSDDVEKLL---AALDSYEDYILISSSAVYPEN 113
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K ++ E + + N RP Y+ G NN E + F
Sbjct: 114 LSQPFKEDSPVGLNNYWGKYGIDKIEAETALLKRNPNAYILRPPYLYGQMNNVYREAFVF 173
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+ + R +P G H+ DL + + ++ A +IFN+ + +++
Sbjct: 174 ECALADRKFYLPKDGEMKLQFFHIHDLCRFIDILLKQKPA--QHIFNVGNKDTISIREWV 231
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
LC G Y+ I+ + F F + +
Sbjct: 232 ALCYHVVGKQAA---YEYVYGDIEQRNYFCFYDYEY 264
>gi|375145657|ref|YP_005008098.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
gi|361059703|gb|AEV98694.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
Length = 326
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K++L+ +GG IG L K+LL +G + +T + D N ++ N N A
Sbjct: 2 KRILV----TGGAGFIGSNLIKKLLSTGCYHITCLDNFD-NFYAREQKELNINNFFNDAC 56
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS 177
+ + D V DV++ K N+ + + ++A+
Sbjct: 57 FEFIEDDIRNVHKHASLDNIDVIIHLAAKAGVRPSIQEPELYQNVNIGGTQALLEFARKR 116
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASF 228
+KQFLF SS+ +Y + P E D + P + + KY SE F + +
Sbjct: 117 NIKQFLFASSSSVYGVSPNVPWNENDRMLPISPYA-CSKYASEMFGYTYSHLYKIRFIAL 175
Query: 229 RPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
R + G D FF+ I +K+P+ I G+G + ++ D+ + A++ +A
Sbjct: 176 RFFTVYGPAQRPDLAIHKFFNCIHQKKPITIFGNGDTARDYTYIDDIVQGIIAAID-YDA 234
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ +FNL + R V+L+ + + Q G I+ Y P+ G
Sbjct: 235 SDFEVFNLGNHRTVSLNNLIRNIEQICG-SRAILQYYPEQPG 275
>gi|448469030|ref|ZP_21600039.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445809857|gb|EMA59893.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 330
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 33/256 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL +G+EV ++ G ++ PF + + G D +
Sbjct: 9 GGTRFIGRHTVADLLANGYEVGMLNRG------TRENPFADDDRVTHVEGDR--KDDQAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
V DVV+D V D +A + G ++++SS Y A+E P EG+
Sbjct: 61 RTAKLSVEPDVVIDCVAYQPADVEAATDVFADADG---YVYVSSGDSY-AAEEVPKREGE 116
Query: 204 V----VKPD-AGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEW 245
P+ A E Y +E N + RP + G + + ++
Sbjct: 117 TPLRACTPEQAADDGSETYGNRKAEGDRAVFAAAEEGVNAMAVRPCIVYGPYDYTERLDY 176
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DR+ V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 177 WIDRVCAHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEE 234
Query: 306 MAKLCAQAAGLPVEIV 321
+ A AAG+ E+V
Sbjct: 235 TLETIADAAGVDCEVV 250
>gi|448349556|ref|ZP_21538389.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
gi|445639522|gb|ELY92627.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
Length = 329
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG L +LL G++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFVDEDRVDHIDGDRTNDSALEAAAMT-- 65
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A R AD A +++ISS Y D P
Sbjct: 66 ADPDAVFDCVAYQPRDVQA--------ATRIFADCAA------YVYISSGAAYGREDIPK 111
Query: 199 HVEGDVVKPDAGHVQVEKYIS-----------------ENFSNWASFRPQYMIGSGNNKD 241
++P + + ++ E N S RP + G +
Sbjct: 112 RETETPLEPCSQEEATDDTMATYGKRKAEGDRAIAAAAERGVNAMSVRPCIVYGPHDYTA 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R + +PG G + A+V D++S L L E A+ +N+ R V
Sbjct: 172 RLDFWIDRVNRFDRILVPGDGTNVWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK 326
T++ M L A A V++VH P+
Sbjct: 230 TIEEMIDLIADALETTVDVVHAGPR 254
>gi|448338471|ref|ZP_21527518.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
gi|445622785|gb|ELY76230.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
Length = 329
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV + A R D + ++ +SS Y +E P
Sbjct: 67 -DPDAVFDCVAYHPKDVRV--------ATRLFED------CEAYVSVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ Q +E++ N + RP + G +
Sbjct: 111 KREGETPLHSCTAEQATDDSAESYGNRKAEGDRAVFAAADDGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
VTL+ M L + VEIVH P+ AAG + +P
Sbjct: 229 VTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPL 268
>gi|288916919|ref|ZP_06411291.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288351628|gb|EFC85833.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 303
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 27/236 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + +GHEVT + G + ++ + G K V GD +
Sbjct: 7 GGSGFLGSRTVRHAVAAGHEVTGLARGGSGAGRLS-----------ALGAKVVRGDLDDA 55
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ G D +L+ + + A + + + LF+S+ GI+ D P
Sbjct: 56 AALRGAFAETKADALLNIASLGFGHADTIVETALQAHLTRALFVSTTGIFTALDPPSKQT 115
Query: 202 GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP 259
+ E I + +W RP + G ++++ + + R P+P+P
Sbjct: 116 ---------RLAAENTIRTSGLDWTIIRPTMIYGGPDDRNMAR-LLNLLQRWPMLPIPLP 165
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
G G Q HV DL+ +L AVE + + A+TL + + AAG
Sbjct: 166 GGGHQLHQPIHVDDLAELLVRAVEL-DVTIGRTYTAAGPAALTLRQVVEQAGAAAG 220
>gi|399575257|ref|ZP_10769015.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
gi|399239525|gb|EJN60451.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
Length = 329
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 44/282 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +E L ++VTI G+ ++ PF + G D ++
Sbjct: 8 GGTRFIGRHTVEEFLAHDYDVTIFNRGNHDN------PFADDERVDHVQGDRT--DDMDL 59
Query: 145 GNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
DVV+D K + R V + S V +++ISS Y +E P EG+
Sbjct: 60 QTASLAAKPDVVVDCVAYKPAEVERAVEVF---SDVDAYVYISSGDAYG-REEIPKREGE 115
Query: 204 V----VKPDAGHVQVEKYISENFSNWA------------------SFRPQYMIGSGNNKD 241
PD Q E E + N S RP + G + +
Sbjct: 116 TPMRPCTPD----QAEDDSGETYGNRKAEGDRVVFEAAESGVDAMSVRPCIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ +R+ + +PG G + A+V D++S L + E EA ++N+ R V
Sbjct: 172 RMDYWLNRVENYDRIVVPGDGQNVWHRAYVEDVASALRVVAEEGEAGE--VYNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
TL+ M L A A V++VH + G+D K +R+
Sbjct: 230 TLEEMLDLAADAMDTDVDVVHAGERELAVGGLDTSKFVLYRD 271
>gi|160894109|ref|ZP_02074887.1| hypothetical protein CLOL250_01663 [Clostridium sp. L2-50]
gi|156864142|gb|EDO57573.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp.
L2-50]
Length = 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 36/266 (13%)
Query: 57 SRRSSVSAFTVKASAAEK----KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD 112
R + K AAEK KK+LI +GG + Y AK + G+EV ++
Sbjct: 4 CRCKQLGGLISKPCAAEKEISMKKILI----TGGTTFVSKYAAKYFVEHGYEVYVV---- 55
Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
NR ++ G + D +G+ + + FDVV D + + + D
Sbjct: 56 -----------NRNSKPQVKGVTLIESDRHNLGDKLKNLHFDVVADITAYD---AQDIID 101
Query: 173 WAKS-SGVKQFLFISSAGIYK-------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
S Q++ ISS+ +Y P D V K ++ E + E +
Sbjct: 102 LHNSLDSFDQYIMISSSAVYPEYGVQPFPEDSERAVNKFWGKYGTDKIEAENALLERVPD 161
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP Y+ GS +N E + FD + R +P +G HV DL ++ + +
Sbjct: 162 AYILRPPYLYGSMDNVYREAFVFDCAMADRKFYLPEAGEMKLQFFHVEDLCRLMEVII-- 219
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLC 310
+ + +I N+ +++++++ C
Sbjct: 220 TKCPTDHILNVGNEKSISIRDWVIKC 245
>gi|116691199|gb|ABK15661.1| BssK [Azoarcus sp. CIB]
Length = 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 25/216 (11%)
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-----PAD 195
P EV + + G +D V+D V + + V+QFL IS+ +Y+ P D
Sbjct: 55 PEEVRDAIPGGEWDAVVDFCAYTPAHVETLLGNLRGR-VRQFLLISTTTVYRNPSGGPLD 113
Query: 196 E-PPHVEGDVVKPDAGHVQ---VEKYISENFSN---------WASFRPQYMIGSGNNKDC 242
E P ++G +P+ G EK ++E+ + RP + G N
Sbjct: 114 ENAPLLDGP--QPELGEYAGYGYEKCLAEDAARRECERLGIGLTVLRPAIIYGYYNYAPR 171
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FFDR+ + P+ IP N V D++ +L + P FNL S AVT
Sbjct: 172 ETYFFDRLRNREPIVIPDPTRSSFNFIWVVDMARLLWRCIGEP-GVVGETFNLASGEAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
+ + G PVE + P G ++ P
Sbjct: 231 YSRIVEALGGIVGKPVETL---PLPVGEITRRNIPL 263
>gi|291302750|ref|YP_003514028.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
gi|290571970|gb|ADD44935.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
Length = 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 31/247 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-----RFNEIVSAGGKTVWG 139
GG +G +L L+ +GHEVT+++ G ++ P+ RF VSA +
Sbjct: 7 GGTGHVGTFLVPRLVTAGHEVTVVSRG-------QRQPYRPHGAWRFVTTVSAD-RQAEE 58
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
D G + + DVV+D D+ R + + A + V+ FL + +Y P+ + P
Sbjct: 59 DAGTFGARIAALEPDVVIDMICFEPDSARQLVE-ALAGRVRHFLHCGTIWVYGPSAQVPG 117
Query: 200 VEGD----VVKPDAGHVQVEKYISENFSNWA----SFRPQYMIGSG-------NNKDCEE 244
E + + ++E Y+ + P ++ G G N + +
Sbjct: 118 TEEQPRRAITEYGRKKAEIEAYLLDQAQRHGFPATVIHPGHISGPGWTPINPAGNLNLD- 176
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
F ++ + +P GM+ H D++ + A+ N AA FN V+ A+TL
Sbjct: 177 -VFQKLADGDTLMLPNLGMETLQHVHADDVAQVFGAAIANRSAALGESFNAVAATALTLR 235
Query: 305 GMAKLCA 311
G A+ A
Sbjct: 236 GYAEAAA 242
>gi|389784009|ref|ZP_10195206.1| hypothetical protein UU7_14835 [Rhodanobacter spathiphylli B39]
gi|388433766|gb|EIL90725.1| hypothetical protein UU7_14835 [Rhodanobacter spathiphylli B39]
Length = 321
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL L+ GH+V ++ G S K + + E V+ +T
Sbjct: 8 GGSGHIGAYLIPALVEQGHDVVNVSRG--QSGKYRPHAAWQSVEQVTL-DRTAEERSGTF 64
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + G+ D+V+D +L + + A V+ FL + +Y P EG+
Sbjct: 65 ASRMAGLRPDIVVDLISFDLPGTQSLVH-ALRGKVEHFLHCGTIWVYGHQPAIPVDEGEP 123
Query: 205 VKPDAGHVQVEKYISENFSNWAS---------FRPQYMIGSG-------NNKDCEEWFFD 248
V P G + K E + S FRP +++G G N D E F
Sbjct: 124 VNP-FGEYGINKAAIETWLLHESRRTGFPATVFRPGHIVGPGWAPIGPCGNLDVE--VFS 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+ R + +P G++ + H D++ + A+ N A+ FN+V+++A+ L G A+
Sbjct: 181 RMARGEEISLPNCGLETLHHVHADDIAQFVMRAIANRPASVGETFNVVAEKALNLRGYAE 240
>gi|448455930|ref|ZP_21594862.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445813149|gb|EMA63131.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL +G+EV ++ G + PF+ + G ++
Sbjct: 12 GGTRFIGRHTVSDLLANGYEVGMLNRG------THENPFSDDERVTHVEGDR--KSERDL 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ DVV+D V + +A + G ++++SS Y A+E P EG+
Sbjct: 64 RTAKLSIEPDVVIDCVAYQPADVETATEVFADADG---YVYVSSGDSYA-AEEIPKREGE 119
Query: 204 V-VKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEW 245
++P A + E Y +E + + RP + G + + ++
Sbjct: 120 TPLRPCTPEQATDDESETYGNRKAEGDRAVFAAAEEGVDATAVRPCIVYGPYDYTERLDY 179
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DR++ + V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 180 WIDRVLSRDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEE 237
Query: 306 MAKLCAQAAGLPVEIV 321
+ A AAG+ EIV
Sbjct: 238 TLETIADAAGVDCEIV 253
>gi|119477576|ref|ZP_01617726.1| hypothetical protein GP2143_08945 [marine gamma proteobacterium
HTCC2143]
gi|119449079|gb|EAW30319.1| hypothetical protein GP2143_08945 [marine gamma proteobacterium
HTCC2143]
Length = 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 55 ASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
ASS S+VSA + +A K++L++ GG IG + + GH VT+ G N
Sbjct: 17 ASSMSSTVSAAVTRPTA---KRILVL----GGSGFIGPHFVRAAQARGHHVTLFNRGRTN 69
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
D + A K V GD + +DVVLDN+G V A
Sbjct: 70 KD------------LFPAAEKLV-GDRNNGLESITKGEWDVVLDNSGYVPRHVMDSAVLL 116
Query: 175 KSSGVKQFLFISSAGIYKPA-DEPP-------HVEGDVVKPDAGHVQ------VEKYISE 220
K V +++F SS Y A D P D + G E Y+S+
Sbjct: 117 KGR-VGRYIFTSSVAAYDVAPDRLPMGATSKLSTLADPTSENVGKYYGPLKAVAEGYVSD 175
Query: 221 NFSNWASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-L 278
+ + ++ RP Y+ G G+ W+ DRI R + PG+ ++ VRDL+ L
Sbjct: 176 IYGDRSTIVRPTYVAGPGDGTQRFTWWVDRIHRGGEILAPGTPETSYSLIDVRDLAEFYL 235
Query: 279 TLAVENPEAASSNIFN 294
TLA E + IFN
Sbjct: 236 TLA----ENDTPGIFN 247
>gi|290954895|ref|YP_003486077.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260644421|emb|CBG67506.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + P + + ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGTRTA-YADAPEWRQVRQVVA--DREHEDREGVF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G+ V + D V+D L++ + + + V L + Y P+D+ P +
Sbjct: 64 GDRVAALNPDAVVDLVCFTLESATALVERLRGE-VGHLLHCGTLWRYGPSDKLP-ISETT 121
Query: 205 VKPDAGHVQVEKYI------SENFSNW---ASFRPQYMIGSG-------NNKDCEEWFFD 248
P G ++K + +E S S P +++G G N D W+
Sbjct: 122 GTPPVGEYGIQKDLIARMLKAETASGGLVTTSLHPGHIVGPGWDPVNPLGNNDPSVWYA- 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ RP+ IPG G++ + H D++ AVE+ EAA+ FN+V+ A+ + G A+
Sbjct: 181 -LSAGRPLRIPGIGVEPMHHVHADDVAQSFERAVEHREAAAGEDFNVVAPTALNVRGYAR 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|269926953|ref|YP_003323576.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790613|gb|ACZ42754.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
Length = 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
LD + L A + V++ A +GVKQFLF S+ +Y A V D + G +
Sbjct: 83 LDASRDILVATKYVSEAAVRAGVKQFLFSSTFAVYGQA--SGLVTEDTPRAPIGMYGFLR 140
Query: 217 YISENFS---------NWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQF 265
SE+ N FR + G G K DR++ +P+ I G+GMQ
Sbjct: 141 TASEHLLLAAQKLDGLNVLIFRQTNIYGKGITKKNTLLNVLADRVLNHQPITIYGTGMQA 200
Query: 266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
N HV D LA+E ++ I+NL S +T+ +A + AA
Sbjct: 201 RNFLHVMDTVQAYKLAIEKQ---ATGIYNLGSTETLTVKTVADIVNDAA 246
>gi|398884435|ref|ZP_10639370.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398194593|gb|EJM81662.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 310
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-------KT 136
+GG IG +L + LLG G+ V ++ + ++ K+ P N + G +
Sbjct: 9 TGGAGFIGSHLVEALLGKGYNVRVLD--NLSTGKVDNLPVGHANLDLMVGDVADAAVVEQ 66
Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
D + V ++ + +D+ + N V + G+K+ +F SSA IY
Sbjct: 67 AMRDCSAVVHLAAVASVQASVDDPVGTHQSNFVGTLNVCEKMLKVGIKRVVFASSAAIYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ D K +K SE + ++ +R ++ + G +D
Sbjct: 127 NNGEGSAIDEDTPKSPLTPYASDKLASEYYLDF--YRREHGLEPVVLRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + ++PV I G G Q + V DL S+L AVE E ++S + N+
Sbjct: 185 SPYSGVISIFTERAISRKPVAIFGDGEQTRDFVFVEDLVSILVQAVETTEPSASAM-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
R+ +L+ + +A G P+ + + P+ I +A
Sbjct: 244 LSRSTSLNDLITELGRATGRPLTVTYQAPRRGDIRHSRA 282
>gi|239627258|ref|ZP_04670289.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517404|gb|EEQ57270.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 339
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 44/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + + L G ++T++ G +P + + IV+ D V
Sbjct: 7 GGTGTISASVTELALKRGWDITLLNRG-------SRPVPDGMDSIVAD-----IHDEEAV 54
Query: 145 GNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGV-KQFLFISSAGIY-KPADE----- 196
G + G T+DVV G DA+R + + +GV +Q+++ISSA Y KP +
Sbjct: 55 GKAIAGTTYDVVAQFVGYTAEDALRDIRLF---TGVARQYIYISSASAYQKPVSDYRITE 111
Query: 197 -----PPHVEGDVVKPDAGHVQVEKYISENF---------SNWASFRPQYMIGSGNNKDC 242
P+ E K DA + ++ Y + F ++ P G+ N
Sbjct: 112 STPLANPYWEYSRQKIDAENALMDAYRRDGFPVTIVRPSHTHCGKKPPVTPHGAKGN--- 168
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W RI+ +PV IPG G + H D + + NP A + F++ +D ++
Sbjct: 169 --WQVLKRILDGKPVIIPGDGTSLWTVTHASDFAKGYVGLMGNPHAIGHS-FHITTDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G+P++ VH
Sbjct: 226 TWNQIYETIADAMGMPLKAVH 246
>gi|433589815|ref|YP_007279311.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|448332587|ref|ZP_21521818.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
gi|433304595|gb|AGB30407.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|445626016|gb|ELY79366.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
Length = 329
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L ELL ++VT+ T G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVAELLDHDYDVTLFTRGTRENPFADDDRVAHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R AD + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRIFAD------CEAYVYVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ + Q + + N + RP + G +
Sbjct: 111 KREGETPLHECTPDQATDDSFKTYGNRKAEGDRAAFAAADDGVPAMVVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ W+ DR+ V +PG G ++ +V D+++ L + E E + +N+ R
Sbjct: 171 ERLNWWVDRVNHFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGEPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
V L+ + + A A VEIVH P+ AAG + + +P
Sbjct: 229 VPLEELVERLADALETDVEIVHAGPRELAAGEISLEDYPL 268
>gi|407973810|ref|ZP_11154721.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
gi|407430870|gb|EKF43543.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
Length = 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 30/262 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----------PPFNRFNEIVSAG 133
SGG ++G ++ + LL +GH+V +M K PP R A
Sbjct: 9 SGGTGLVGRFIVEALLEAGHKVCVMGRKPPADGFFSKSVDFLPGTLEPPLVRTAAFEGAD 68
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E G GG D NL+ + D A+++GVK+ +F+S+ +Y P
Sbjct: 69 FFIHAAFAHEPGKYRGGEGNDPERFRR-LNLEGSAALFDAARTAGVKRAVFLSTRAVYGP 127
Query: 194 -ADEPPHVEGDVVKPDAGHVQVEKYISEN----FSNWA----SFRPQYMIGSGNNKDCEE 244
AD E D +PD + +V K +EN SN + S R + G +
Sbjct: 128 RADGVMLDEADACRPDTLYGEV-KLAAENGLAGLSNESFAGISLRVTGVYGPAGPGQAHK 186
Query: 245 W--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAV 301
W F+ + RPV + H RD+++ + L ++ P +A S+ FN VSD A+
Sbjct: 187 WAGLFEDFLEGRPV-----APRVATEVHGRDVAAAVMLVLDAPMQAVSAQTFN-VSDIAL 240
Query: 302 TLDGMAKLCAQAAGLPVEIVHY 323
+ L A+ +GL + + Y
Sbjct: 241 DRHDLLALVARESGLNLPLPEY 262
>gi|152967949|ref|YP_001363733.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
gi|151362466|gb|ABS05469.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
Length = 337
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 31/263 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL+V GH IG YL L+G+GHEV ++ G + P + R +V+ +
Sbjct: 19 RVLVVGAT--GH--IGSYLVPRLVGAGHEVVALSRGTREPYR-AHPAWERVERVVA--DR 71
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG---IYK 192
G V + D V+D + R + + + +G F++ G ++
Sbjct: 72 DAEDAAGTFGARVARLRPDAVVDLVCFTPASARLLVEALRPTGA----FLAHCGTIWVHG 127
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENF---SNWASFR-----PQYMIGSG------- 237
PA P E D P + + I E + R P ++ G G
Sbjct: 128 PAAASPLREDDPRAPFGEYGTQKAAIEELLLAETRSGGLRTTVLHPGHISGPGWPVITPL 187
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
N D + W R+ + +PG G++ + H D++ A+ +P AA+ F++VS
Sbjct: 188 GNLDPQVW--RRLSTGEELLVPGLGLETLHHVHADDVAQGFERALADPGAAAGESFHVVS 245
Query: 298 DRAVTLDGMAKLCAQAAGLPVEI 320
DRA+T+ G A+ A+ G ++
Sbjct: 246 DRALTVRGFAEAAARWWGREADL 268
>gi|453054133|gb|EMF01588.1| carbohydrate epimerase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 342
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 43/265 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ LLG GH V+++ D + R V G + G D
Sbjct: 7 TGGAGFIGSHVAEALLGLGHRVSVL-------DDLSGGSAER----VPDGAELFVGSVTD 55
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLF 184
V + FD V N G N+ + + A GV F F
Sbjct: 56 AELVDKLFAEQRFDRVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALHHGVSFFCF 115
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSG 237
SS +Y + P V D+ + VE+ + + +FR + G
Sbjct: 116 ASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEW 175
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
N ++ FF++I+R P+ + G G Q ++V+D+ ++ A E EAA
Sbjct: 176 QNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EAAWGRA 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLP 317
FN+ S R T+ +A+ +AAG P
Sbjct: 235 FNVGSSRTNTVLELAQAVRRAAGAP 259
>gi|223934764|ref|ZP_03626684.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223896719|gb|EEF63160.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 329
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYIS---ENFS-NWASFRP 230
VK F+F SS +Y A + P +E V +P+ VE ++ E F N+ FRP
Sbjct: 109 VKCFVFTSSIAVYG-AGQVPMIESMVPRPEDPYGISKFAVEMDLAAAHEMFGLNYIIFRP 167
Query: 231 QYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ G N ++ F ++I+RK P+ I G GMQ +H+ DL+ + +V+
Sbjct: 168 HNVYGENQNIGDKYRNVIGIFMNQIMRKEPMTIFGDGMQTRAFSHIDDLAPQIARSVK-V 226
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
A + I N+ +D+ +++ +A + + A G+ I + P+
Sbjct: 227 RKAYNEIINIGADKPYSVNELAYVVSSAFGVSPRIKYLTPR 267
>gi|448359916|ref|ZP_21548561.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445641211|gb|ELY94293.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 43/270 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +LL ++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRHLVSDLLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAAATT- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP- 197
+P V + V DV A R AD + +++ISS Y + P
Sbjct: 67 -NPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPK 111
Query: 198 -----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKD 241
P D G + E + ++ N S RP + G + +
Sbjct: 112 RENETPLESCSPEEATDDSDATYGKRKAEGDRAIEAAADRGVNAMSVRPCIVYGPDDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ + V +PG G + A V D++S L + E EA + +N+ R V
Sbjct: 172 RLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAERGEAGEA--YNVGDQRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
T D M L A A V+IVH P+ AAG
Sbjct: 230 TFDEMVDLIADALETTVDIVHAGPRELAAG 259
>gi|343084239|ref|YP_004773534.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342352773|gb|AEL25303.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 317
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 29/242 (11%)
Query: 93 YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV---VG 149
YL L+ +GH V + V ++S +K P + E V+ E GN +
Sbjct: 15 YLIPRLVEAGHRV--VCVSRQHSIPYRKHPAWKSVEHVTIDRVKA----EEAGNFSSQIV 68
Query: 150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA 209
+ D+V+D ++ R +++ A + +K FL S ++ +++ P E KP
Sbjct: 69 ALNGDIVIDLICFTAESARKLSE-ALNGKIKHFLHCGSMWVHGHSEQVPTTENQKRKPFG 127
Query: 210 GH----VQVEKYISENFSNWASF-----RPQYMIGSG-------NNKDCEEWFFDRIVRK 253
+ +E Y+ +F + F P +++G G N + E F R+ +
Sbjct: 128 EYGIDKANIEAYL-HSFHQESGFPVTILHPGHIVGPGWLPVNPAGNFNPE--VFVRLAKG 184
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
V IP GM+ + H D++ ++EN + A F++VS++A+TL G A+ A+
Sbjct: 185 EVVQIPNLGMETVHHVHADDVAQAFVKSIENRDYAIGESFHVVSEQALTLRGFAEAMAEK 244
Query: 314 AG 315
G
Sbjct: 245 FG 246
>gi|406936590|gb|EKD70274.1| hypothetical protein ACD_46C00581G0009 [uncultured bacterium]
Length = 337
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-------------PDAGHVQVEKY-IS 219
A+ +GV++FLF SS G+Y PA+ E DV K G +Q E Y I
Sbjct: 106 ARRAGVERFLFTSSVGVYSPAE--IFYEDDVWKTFPSPSDRFAGWAKRMGELQAEAYKIE 163
Query: 220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR------PVPIPGSGMQFTNIAHVRD 273
N+ + RP + G +N D + KR P+ + G G + H RD
Sbjct: 164 YNWDKISIVRPANVYGPFDNFDPANAMVIPSLIKRAMDGENPLTVWGDGSPIRDFIHARD 223
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL-CAQAAGLPVEIVHYDPKAAGIDA 332
++ + LAVE + NL S VT+ +A++ A G P+EIV K G DA
Sbjct: 224 VACGMMLAVEK---GINEPINLGSGTGVTIKEIAEIVAANVPGGPIEIVWDITKPKG-DA 279
Query: 333 KK 334
K+
Sbjct: 280 KR 281
>gi|312142954|ref|YP_003994400.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
gi|311903605|gb|ADQ14046.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
Length = 314
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
F++ AG ++ WG+ F++ NN + + + + AK S +K+F++
Sbjct: 78 FHQAAQAGVRSSWGED-----------FEIYTHNN---IMGTQRLLEAAKESNIKKFVYA 123
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNW----ASFRPQYMIGS 236
SS+ +Y D+ P E + ++P + + V K EN + N+ S R + G
Sbjct: 124 SSSSVYGDTDQLPMQETNRLQPVSPY-GVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGE 182
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D F I++ + + I G G Q N HV+D+ LA E+ A+ IFN+
Sbjct: 183 RQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVQDIVKANILAAESD--AAGEIFNI 240
Query: 296 VSD--RAV---TLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKA 335
D R V ++D M ++ + A + +V D K D KA
Sbjct: 241 GGDGKRVVLNDSIDLMEEIIGKKANREYQKVVKGDVKHTSADTSKA 286
>gi|429193538|ref|YP_007179216.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|448323913|ref|ZP_21513357.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
gi|429137756|gb|AFZ74767.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|445620053|gb|ELY73562.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
Length = 329
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 103/260 (39%), Gaps = 31/260 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL +G++VTI G+ + PF + + G +
Sbjct: 8 GGTRFIGRHLVTELLANGYDVTIFNRGNHDD------PFAADDRVERVQGDRTD--DDAL 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V D V D D VR + + +++ISS Y D P EG+
Sbjct: 60 AAAADEVDPDAVFDCVAYYPDDVRAAT--RIFADCEAYVYISSGAAYGREDIPKR-EGET 116
Query: 205 -----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+ A + + Y +E + S RP + G + + +++
Sbjct: 117 PLAPCTRNQATDDEGDTYGNRKAEGDRAVFEAAEEGVDAMSLRPPIVYGPHDYTERLDFW 176
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ R V +PG G + +V D++S L + E + + +N R VTL+ M
Sbjct: 177 IDRVNRFDRVVVPGDGTNIWHRVYVEDVASALRIVAERGDPGEA--YNTGDRRLVTLEEM 234
Query: 307 AKLCAQAAGLPVEIVHYDPK 326
+L A VEIVH P+
Sbjct: 235 VELIADQLDTDVEIVHAGPR 254
>gi|269796015|ref|YP_003315470.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
gi|269098200|gb|ACZ22636.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
Length = 329
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI + + G++VT++ G ++ + +E+ + DP V
Sbjct: 10 GGSGVISSASVRLAVQRGYDVTVLNRGSSSTRSLP-------DEVRTLRADV--RDPGSV 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGD 203
+GG FD V+D + V+ D + Q++FISSA Y+ P P +E
Sbjct: 61 REALGGREFDAVVDWVAFTPEHVQQDVD-LFTGRTGQYVFISSASAYQTPPSRLPVLEST 119
Query: 204 VVK-PDAGHVQVEKYISENFSNWASFR----PQYMIGSGNNKDCEE------W-FFDRIV 251
++ P G+ Q +K E+ A++R P ++ + D W +R+
Sbjct: 120 PLRNPFWGYSQ-DKIACEDLLV-AAYRDAGFPATVVRPSHTYDQTSVPLDGGWTVVERMR 177
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+ V + G G I H D + + NP + F++ SD A+T D + + A
Sbjct: 178 AGKEVVVHGDGTSLWTITHTEDFALGFVPLLANPRTVG-DTFHITSDEALTWDHITQTLA 236
Query: 312 QAAGLPVEIVHYDPKA-AGIDA 332
+AAG+ +IVH A A +DA
Sbjct: 237 RAAGVEAKIVHVPSDAIAAVDA 258
>gi|170780544|ref|YP_001708876.1| lipoprotein [Clavibacter michiganensis subsp. sepedonicus]
gi|169155112|emb|CAQ00212.1| conserved putative lipoprotein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 352
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 29/253 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
GG I + + +G +VT++ G D R ++ DPA
Sbjct: 19 GGTGTISAACVRASVAAGMDVTVVNRGADAQGRGTPDGVTTRIADVT---------DPAA 69
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV---RPVADWAKSSGVKQFLFISSAGIY-KPADEPPH 199
+ +G TFD V+D + DA R V +A + +QF+ ISSA IY KPA + P
Sbjct: 70 LLAAIGDRTFDAVVDF--LSFDAAGADRRVEVFAGRT--RQFVAISSASIYRKPALQTPI 125
Query: 200 VEGDV-VKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSGNNKDCEEW-FFDR 249
E + P + + + + + F + + RP + + +W DR
Sbjct: 126 TESTLRANPFLSYARDKIAMEDAFLRYHAASGFPVVIVRPSHTYDEASPPLAGDWTVVDR 185
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
I R V +PG G + H D + L + + E A ++ S +T D + +L
Sbjct: 186 IARGDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERAVGEALHITSGDVMTWDRIRRL 244
Query: 310 CAQAAGLPVEIVH 322
A A G+ +VH
Sbjct: 245 VADALGVEARLVH 257
>gi|148272880|ref|YP_001222441.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830810|emb|CAN01751.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 321
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 79 IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTV 137
+V + GH IG +L L+ SGH+V ++ G + + P ++R + V +
Sbjct: 3 VVVIGATGH--IGTFLVPRLVESGHDVVAVSRGTREPYR-ESPLWDRVERVRVDRDAEDA 59
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
G A + + ++ +VV+D ++ R + + + V+ + I S + +
Sbjct: 60 AGTFA---DRIAALSPEVVVDLVCFTPESARHLVEGLRGR-VRHLVHIGSIWTHGLSTSL 115
Query: 198 PHVEGDVVKPDAGH----VQVEKY-ISENFSN---WASFRPQYMIGSG-------NNKDC 242
P E D +P + ++E+Y I+E+ S P ++ G G N D
Sbjct: 116 PLREDDPKEPFGEYGVQKAEIERYLIAESRSGGVPCTVVHPGHISGGGWPVITPVGNLDP 175
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W + P+ +PGSG + + H D++ ++ LA+ N E + F+ VSDRA++
Sbjct: 176 AVWTA--LATGGPLAVPGSGSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALS 233
Query: 303 LDGMAKLCAQAAGLPVEIVHYD 324
+ G A+ A G E+ H D
Sbjct: 234 VRGFARAAAAWFGREPELEHLD 255
>gi|311107665|ref|YP_003980518.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
gi|310762354|gb|ADP17803.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
Length = 317
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 32/274 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T G + D + NRF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYR-NVLTRGRDELDLENQNQVNRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ T V KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQTHPVEFLY--KNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 V--------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFD 248
+ AG E Y E + + P + G +N D +
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREFGARFICAMPTNLYGQHDNYDLQSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A ++N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVSIWGTGAPLREFLYVDDLAQACVMLMEHPQA--EGMYNIGAGQ 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A+L A+ G IV+ K G K
Sbjct: 243 DISIADLARLVARVVGYEGNIVYDSSKPDGTPRK 276
>gi|409356804|ref|ZP_11235191.1| dTDP-glucose 4-epimerase [Dietzia alimentaria 72]
Length = 312
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 107/268 (39%), Gaps = 47/268 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG L LL GHEVT++ D + + AG + V+
Sbjct: 6 TGGAGFIGSTLVDRLLAEGHEVTVV-------DDLSRGRLENLESARGAGNRFVFHQLGL 58
Query: 141 --PAEVGNVVGGVTFDVVL-----------------DNNGKNLDAVRPVADWAKSSGVKQ 181
PA +G++V +V+ D + VR +A+ A+ +GV++
Sbjct: 59 TSPA-IGDLVAEARPEVIFHLAAQIDVRLSVEDPVHDAQVNVVGTVR-LAEAARRAGVRR 116
Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN-----WASFRPQ 231
+F SS G IY P E P E V P AG V E Y+ E FS WA P
Sbjct: 117 IVFTSSGGSIYGPVTELPVAESQPVDPLSPYAAGKVAGEIYL-EMFSRLYGIEWAGVAPA 175
Query: 232 YMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G + E F R++ +P + G G + V D+ A PEA
Sbjct: 176 NVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVVDAFVRAARVPEA 235
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
A FN+ + + G+ L AQAAG
Sbjct: 236 AGLR-FNVGTGVETSDRGLHTLVAQAAG 262
>gi|395777032|ref|ZP_10457547.1| oxidoreductase [Streptomyces acidiscabies 84-104]
Length = 326
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + P + + ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGTSTA-YADAPEWGQVRQVVADRQQE--DTEGTF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G+ V + DVV+D LD+ + + + + L + Y P+D+ P E
Sbjct: 64 GDRVAALAPDVVVDLVCFTLDSATALVERLRGA-TGHLLHCGTLWRYGPSDKLPISETSG 122
Query: 205 VKPDAGHVQVEK-----YISENFSNWA----SFRPQYMIGSG-------NNKDCEEWFFD 248
P G +EK + +N S P +++G G N D W+
Sbjct: 123 TPP-VGEYGIEKDRIARMLKAETANGGLVTTSLHPGHIVGPGWEPVNALGNLDPTVWY-- 179
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ P+ IPG G + + H D++ A+++ +AA+ FN+V+ A+T+ G A
Sbjct: 180 TLSAGHPLKIPGIGAESMHHVHADDVAQSFERAIDHRDAAAGEDFNVVAPTALTVRGYAN 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|346323619|gb|EGX93217.1| reductase [Cordyceps militaris CM01]
Length = 327
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G +A++ L GH+VT+ FNR N+ AG + + GD
Sbjct: 7 GGTHYVGRLVAEQALARGHQVTV---------------FNRGNKPAPAGARVLIGDRLAE 51
Query: 145 GN--VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY--KPADEPPHV 200
+ + G+TFD V+D + AV+ A ++ + F+SS +Y K A P
Sbjct: 52 NSYAALDGLTFDAVIDTWALDTSAVKQAIA-ALQGRMEHYAFVSSISVYDHKAAPAPYDE 110
Query: 201 EGDVVKPDAGHVQV--EKYISENFSNWAS-----FRPQYMIGSGNNKDCE-EWFFDRIVR 252
V+ D V+ +K SE + + RP ++G G + W+ R+ R
Sbjct: 111 TSPVLDMDRTPVRYCKDKLGSEREAAASGVPTLIVRPGLIVGPGESTPGRLPWWLRRMER 170
Query: 253 KRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
P PG +QF + RDL++ L ++ E IF+ VS +TL G+ +
Sbjct: 171 GGPTLAPGPEDLALQFID---GRDLAAFL---LDGAERKLHGIFDAVSSPGYITLAGLLE 224
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY 347
AAG + D G D KA + M ++
Sbjct: 225 AANDAAGGRASLHWVD----GDDVAKAIAGKRMEIPMWF 259
>gi|332715613|ref|YP_004443079.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
gi|325062298|gb|ADY65988.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
Length = 307
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 33/262 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG------GKTVW 138
GG IG +L ++L+ +GH VT+M ++ P + + +S + V
Sbjct: 7 GGGGFIGCHLVEDLVAAGHAVTVM-----GRSRLSSRPLSTEVQYISGELADSKLMRKVL 61
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAG-IYKP 193
D V ++V G + G+ NL + + + GVK+ L++SS G +Y
Sbjct: 62 RDIDAVAHLVSGTVPSTGDKDPGRDVEVNLLGTLSLLEDMAACGVKRILYLSSGGTVYGK 121
Query: 194 ADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGS-------GN--NK 240
E P EG ++ P + V +E Y+ + + A +P + S GN +
Sbjct: 122 PQEIPIPEGHILDPICSYGVVKVAIESYL-KLYEMKAGLQPIVIRASNPYGPYQGNLGVQ 180
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ + ++ +P+ I G G + HV+DL+S+ A+++ + I+N S
Sbjct: 181 GIIGTYLNLALKHQPIEIWGDGSTIRDYIHVKDLASLCVAALQSDKIG---IYNGGSGTG 237
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
++ +A++ + G P+ I++
Sbjct: 238 TSVLHIAEVVQEITGNPIPIIY 259
>gi|149920314|ref|ZP_01908785.1| NAD dependent epimerase/dehydratase family protein [Plesiocystis
pacifica SIR-1]
gi|149818901|gb|EDM78341.1| NAD dependent epimerase/dehydratase family protein [Plesiocystis
pacifica SIR-1]
Length = 340
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 38/233 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLI+ GG +G + + + +GHEVT+ G N + F E+ G
Sbjct: 2 RVLIL----GGTGFLGPHFVRAAVAAGHEVTLFNRGKTNP--------HLFPELPKLRGD 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD A + G FDVV+D +G + V A S+ +Q+LF+SS Y
Sbjct: 50 RREGDLA----ALEGKHFDVVVDTSGYVPEHVSATASLLSSA--RQYLFVSSVSAYANQG 103
Query: 193 --------PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS------FRPQYMIGSGN 238
P E P D V+ G + K + E + A RP ++G G+
Sbjct: 104 QAGLTADAPLAEHPEPGNDDVRQFYGPL---KALCEQAAEAAMPGKTTVIRPGLIVGPGD 160
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
D ++ R+ R V PG + RDL++ + L +E + + N
Sbjct: 161 PTDRFTYWPVRLARGGEVLAPGQPEDPVQLIDARDLAAFMLLCLERGQTRTYN 213
>gi|365155762|ref|ZP_09352114.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
gi|363628044|gb|EHL78863.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
Length = 301
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 37/281 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTV----- 137
+GG IG +L +ELL G +V ++ K P +I S G K +
Sbjct: 6 TGGAGFIGSHLVEELLLQGAKVHVLDNLVSGQLKNVHPLAVMHIEDIRSQGAKQIIKREK 65
Query: 138 ------WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
A+VG + +D ++ NG + + + + VK+ +F S++G+Y
Sbjct: 66 PDVVFHLAAQADVGQSIREPKYDADMNING-----TINILEACREASVKKVIFASTSGVY 120
Query: 192 KPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASFRPQYMIGSGNNKDCE 243
+ E D+ P + H + E YI ++ R + G + E
Sbjct: 121 GNLQKDLISEKDLTMPISYHGLSKLTAESYIRLFHQLYGLSYTILRYGNVYGPRQSAKGE 180
Query: 244 ----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
F DRI + P+ I G G Q + +V+D+ AVE + + + + +
Sbjct: 181 GGVIAIFLDRIKKGMPLMIHGDGEQTRDFVYVKDIVRANIAAVEKGDQET---IQVSTGK 237
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHY-----DPKAAGIDAKKA 335
+++++ + K+ Q G P+E ++ D K + +D KKA
Sbjct: 238 SISINHLVKMLTQIYGSPIETIYTHARTGDIKHSCLDNKKA 278
>gi|320547073|ref|ZP_08041370.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
gi|320448279|gb|EFW89025.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
Length = 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D ++GN + + FDVVLD N + + + S G ++ ISS+ +Y P
Sbjct: 4 ADRHDLGNRLKNLHFDVVLDVTAYNASDISCLIEGLGSFGT--YIMISSSSVYPDDGAQP 61
Query: 199 HVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
+E + + + EK + E + RP Y+ G NN E + FD
Sbjct: 62 FLETSQLGDNKFWGQYGLDKIAAEKQLLELVPDAYILRPPYLYGPMNNVYREAFVFDCAE 121
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
P +P G +++DL M+ +EN +++N+ + A+++ KLC
Sbjct: 122 DDLPSYLPRKGELKLQFFYIKDLCRMMEKIIEN--QPKEHLYNVGNSEAISVRQWVKLC 178
>gi|443624519|ref|ZP_21108989.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
gi|443341964|gb|ELS56136.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 43/273 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ LL GH V+++ D + R E G + G D
Sbjct: 7 TGGAGFIGSHVAEALLSRGHRVSVL-------DDLSGGSAERVPE----GAQLFTGSVTD 55
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLF 184
V + FD V N G N+ + + A +GV F F
Sbjct: 56 VELVDRLFAEQRFDHVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALRTGVSFFCF 115
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSG 237
SS +Y + P V D+ + VE+ + + +FR + G
Sbjct: 116 ASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEW 175
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
N ++ FF++I+R P+ + G G Q ++V+D+ ++ A E E A
Sbjct: 176 QNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EKAWGRA 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
FN+ S R T+ +A+ AAG+P + + P
Sbjct: 235 FNVGSSRTNTVLELAQAVRAAAGVPSHPIAHLP 267
>gi|448374298|ref|ZP_21558183.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
gi|445660975|gb|ELZ13770.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
Length = 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG +L +ELL +EVT+ G+ + PF + + G +T GD E
Sbjct: 8 GGTRFIGRHLVEELLEHEYEVTLFNRGNHEN------PFADTDGVDHVQGDRTDDGDLVE 61
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
V FD V +++ V D V +++ISS Y D P EG
Sbjct: 62 AAAVEPDAVFDCVA-YFPRDVRQATTVFD-----DVDAYVYISSGAAYGREDLPKR-EGF 114
Query: 204 VVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEW 245
+ Q SE + N S RP + G + + ++
Sbjct: 115 TPLCECTDEQATADESETYGPRKAEGDRVVFEAAADGVNAMSVRPPIVYGPHDYTERLDY 174
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DRI R V +PG G + +V D++S + + E E + +N+ RAVTL G
Sbjct: 175 WIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAEEGEPGEA--YNVGDQRAVTLRG 232
Query: 306 MAKLCAQA 313
M +L ++
Sbjct: 233 MLELIDES 240
>gi|354611937|ref|ZP_09029889.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
gi|353191515|gb|EHB57021.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
Length = 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 39/268 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L +ELL + VT T G+ + PF + + V GD +
Sbjct: 8 GGTRFIGRHLVEELLAHDYRVTTFTRGNHDD------PFAEDDRVAH-----VEGDRTDR 56
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP-PHV 200
+++ V D V DN V D + V ++++SS Y DE P
Sbjct: 57 KDLLAAKREVDPDAVFDNVAYKPRDVESATDI--FADVDAYVYVSSGAAY--GDEAVPKR 112
Query: 201 EGDVVKPDAGHVQVEK------------------YISENFSNWASFRPQYMIGSGNNKDC 242
EG+ Q +E N + RP + G ++ +
Sbjct: 113 EGETALETCTAEQATDDSPASYGARKAAGDRIVFEAAERGVNAMAVRPPVVYGPHDHTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ DR+ + +PG G +V D++ L L E E +N+ AVT
Sbjct: 173 LAYWVDRVAEHDELVVPGDGTNLWQRVYVEDVAQGLRLVAE--EGDPGEAYNVGDRNAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
LD + L A A G VE + P+ I
Sbjct: 231 LDRLLDLIADALGTDVERAYTSPRELSI 258
>gi|448537773|ref|ZP_21622642.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
gi|445701733|gb|ELZ53706.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
Length = 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 37/258 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL +EV I G+ + PF + + G D +
Sbjct: 9 GGTRFIGRHTVDELLAHDYEVAIFNRGN------HEDPFAEDDRVTHVEGDR--KDETAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D A +P A + + V +++ISS Y A+E P E
Sbjct: 61 RAAKLSVEPDVVIDCV-----AYQPADVEAATEIFADVDGYVYISSGSSYA-AEEIPKRE 114
Query: 202 GDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKDCE 243
G+ Q E + N + RP + G + +
Sbjct: 115 GETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAEEGVAAMAVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ + IPG G + A+V D++S L + E E ++ +N+ RA+TL
Sbjct: 175 DYWIDRVLTHDRLVIPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRALTL 232
Query: 304 DGMAKLCAQAAGLPVEIV 321
+ A AAG+ E+V
Sbjct: 233 RETVETIADAAGVEAEVV 250
>gi|386857551|ref|YP_006261728.1| NAD dependent epimerase/dehydratase family [Deinococcus gobiensis
I-0]
gi|380001080|gb|AFD26270.1| NAD dependent epimerase/dehydratase family [Deinococcus gobiensis
I-0]
Length = 335
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 45/240 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---- 140
GG +G ++ + + +GH VT++T G +++ + AG + + GD
Sbjct: 7 GGTRFVGRHIVEAFVAAGHRVTVLTRGQTDAE-------------LPAGVERLTGDRDEG 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA----- 194
PA + +G +D +D +G VR + A V Q++F+S+ +Y +P
Sbjct: 54 PAGLA-ALGARRWDACVDVSGYQPRQVR-ASTHALRDRVGQYVFVSTVSVYAEPGREVVR 111
Query: 195 ----------DEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCE 243
DE V GD P V E + F A+ RPQ + G +
Sbjct: 112 ETDPLLPPCPDEAAPVTGDTYGPL--KVACEALVEAAFPGAATILRPQIVAGPEDYTRRT 169
Query: 244 EWFFDRIVR----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++ +R R + PV PG G F + RDL+ L V A IFN+ R
Sbjct: 170 LYWPERAARAGAGETPVLAPGDGQDFVQVIDARDLAR---LTVRLTGARRPGIFNVAGPR 226
>gi|448458358|ref|ZP_21596149.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445809695|gb|EMA59735.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 339
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI+ GG +I + + L GH+VT +T G+ ++D F R +
Sbjct: 3 VLII----GGTGLISTAITRLLAADGHDVTCLTRGETDADLPSSVSFRRADRT------- 51
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP-VADWAKSSGVKQFLFISSAGIY-KPA 194
D A + + V FD V+D + + R VA +A + Q++F S+ +Y +P
Sbjct: 52 ---DRAALADAVSDDDFDCVIDMVCFDAETAREAVAVFADRT--DQYVFCSTVDVYHRPP 106
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSG----NNKDC 242
+ P E +P K +E+ A RP G G +
Sbjct: 107 ERNPVREDASREPPVSEYAAGKAAAEDVFRAADGDAFATTIVRPWSTYGEGGPVLHTLGT 166
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ DRI + +PV + G G H D++ AV N + A +++ S+ +T
Sbjct: 167 GTYYIDRIRKGKPVLVHGDGTSLWGPCHRDDVARAFVNAVGNTD-AFGEAYHVTSEETMT 225
Query: 303 LDGMAKLCAQAAGLPV-EIVH 322
+ A+A P E+VH
Sbjct: 226 WNQYHLRVARALDAPEPELVH 246
>gi|319949389|ref|ZP_08023456.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4]
gi|319436946|gb|EFV91999.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4]
Length = 312
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 109/268 (40%), Gaps = 47/268 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----- 138
+GG IG L LLG GH+VT++ D + + AG + V+
Sbjct: 6 TGGAGFIGSTLVDRLLGEGHDVTVV-------DNLSRGRLENLAAAREAGDRFVFHQLDL 58
Query: 139 GDPAEVGNVVGG----VTF-------------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
DPA + +VV V F D V D + VR +A+ A+ +GV++
Sbjct: 59 TDPA-IEDVVAQARPEVIFHLAAQIDVRLSVEDPVHDAEVNVVGTVR-LAEAARKAGVRR 116
Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN-----WASFRPQ 231
+F SS G IY P E P E V P AG V E Y+ E FS WA P
Sbjct: 117 IVFTSSGGSIYGPVTELPVAETRPVDPLSPYAAGKVAGEIYL-EMFSRLYGIEWAGVAPA 175
Query: 232 YMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G + E F R++ +P + G G + V D+ A E P A
Sbjct: 176 NVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVVDAFVRAAEVPAA 235
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
A FN+ + T G+ L A+AAG
Sbjct: 236 AGLR-FNVGTGVETTDRGLHTLVAEAAG 262
>gi|15077452|gb|AAK83179.1|AF333038_24 putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 37/270 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++A+ LL GH V+++ D + R E +V D
Sbjct: 7 TGGAGFIGSHVAEALLSRGHRVSVL-------DDLSGGTAERVPEGAHLFTGSV-TDVEL 58
Query: 144 VGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLFISS 187
V + FD V N G N+ + + A +GV F F SS
Sbjct: 59 VDRLFAEQRFDHVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALRTGVSFFCFASS 118
Query: 188 AGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSGNN- 239
+Y + P V D+ + VE+ + + +FR + G N
Sbjct: 119 VAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEWQNM 178
Query: 240 ----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
++ FF++I+R P+ + G G Q ++V+D+ ++ A E E A FN+
Sbjct: 179 RDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EKAWGRAFNV 237
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
S R T+ +A+ AAG+P + + P
Sbjct: 238 GSSRTNTVLELAQAVRAAAGVPSHPIAHLP 267
>gi|54025750|ref|YP_119992.1| UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152]
gi|54017258|dbj|BAD58628.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152]
Length = 326
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 57/278 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G A LL GHEV + +T G N+D V AG + V GD
Sbjct: 6 TGGAGYVGGVCALVLLEQGHEVVVVDDLTTG--NADG------------VPAGARFVEGD 51
Query: 141 PAEVG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFL 183
AEV ++ TFD VL ++L RP W + +G + +
Sbjct: 52 VAEVAPALLRAETFDGVLHFAAQSLVGESVERPEKYWHGNVVKTLELLEAMRHTGTGRLV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A +Y ++ P E +P + + I +++A S R + G
Sbjct: 112 FSSTAAVYGEPEQVPITEDAPTRPTNPYGATKLAIDHAITSYAIAHGLAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + + G+ G + H+RDL+ L
Sbjct: 172 AYGGLGENRVVETHLIPLVLQVALGHRESISVYGTDWPTPDGTAIRDYIHIRDLADAHLL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
A+ + E S I+NL S ++ + C + GLP+
Sbjct: 232 ALTSAEPGSHRIYNLGSGTGFSVREVISACERVTGLPI 269
>gi|392945316|ref|ZP_10310958.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
gi|392288610|gb|EIV94634.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
Length = 325
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 38/282 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ LL +GH+V + V SD + ++ +++ G T AE
Sbjct: 6 TGGSGFIGSHVVDRLLDAGHDVLSLDVDSRPSDPRAR---SQQVDVLDLPGLTAALAGAE 62
Query: 144 -VGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIY----KPA 194
V +V G D + + N++ V + A+ +GV + LF S+ +Y + A
Sbjct: 63 AVFHVAGMSNVDFAYADPARTVRLNVEGTGNVCEAARQAGVGRVLFASTVWVYGAVGERA 122
Query: 195 DEPPHVE-GDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNNKDC 242
D P E ++ AGHV ++ S++ Y + G G
Sbjct: 123 DPAPLTEDAEITLGRAGHVYTSTKLAAELL-LHSYQQTYGLPFTILRYGIPYGPGMR--- 178
Query: 243 EEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+E R VRK + + G G QF N VRDL+ LA+ PEA ++ I L
Sbjct: 179 DELVLARFVRKALDGESLTVAGDGQQFRNYVFVRDLADAHVLAL-RPEAENATI-ALEGA 236
Query: 299 RAVTLDGMAK-LCAQAAGLPVEIVHYDP---KAAGIDAKKAF 336
AV++ MA+ +C G +E V P + + A++A
Sbjct: 237 EAVSVLEMAQAVCQHFPGTAIEHVPARPGDFRGREVSARRAL 278
>gi|448312943|ref|ZP_21502675.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445599789|gb|ELY53813.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 329
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL + ++VT++ G ++ PF+ + G E
Sbjct: 8 GGTRFIGRHLVAELLEADYDVTLLNRG------TRENPFDADERVSHVEGDRTNDSALES 61
Query: 145 GNVVGGVTFDVVLD---NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ V D V D + K++ A + D + ++++SS Y +E P E
Sbjct: 62 AAMT--VDPDAVFDCVAYHPKDVRAATRIFD-----DCEAYVYVSSGAAYG-REEIPKRE 113
Query: 202 G-------------DVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKDCE 243
G D G+ + E +EN S RP + G + +
Sbjct: 114 GETPLEACTADQAVDETGATYGNRKAEGDRAVFAAAENGVRAMSVRPPIVYGPHDYTERL 173
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+W+ DR+ R V +PG G + +V D++S L + E +A + +N+ R VTL
Sbjct: 174 DWWIDRVDRFDRVLVPGDGTNVRHRVYVEDVASALRIVAERGDAGEA--YNVGDRRLVTL 231
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK 326
M L A V++V P+
Sbjct: 232 AEMVDLVADQLDAAVDVVTAGPR 254
>gi|312880523|ref|ZP_07740323.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
gi|310783814|gb|EFQ24212.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
Length = 311
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 34/270 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNE----------I 129
+GG IG L LL GH VT++ + EN ++ RF E
Sbjct: 6 TGGAGFIGSNLVDALLADGHGVTVLDDLSSGYGENLAHLRGREGFRFLEGDVRDEALLAQ 65
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + V+ A VGN + D L + N+ V + A+S+G ++ +F SSAG
Sbjct: 66 AARGQEAVFHLAASVGN---KRSIDNPLTDADINVLGTLKVLEAARSAGCRKVVFSSSAG 122
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-------NWASFRPQYMIGSGNNKDC 242
I+ P E V+PD+ + K +E + + +Y G +
Sbjct: 123 IFGELKTLPIAEDHPVEPDSPY-GCTKLCAEKLCLAYAKLYDLEAVALRYFNVYGPRQRF 181
Query: 243 EEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + F +I+R P+ + G G Q + HVRD+ A + E S FN+
Sbjct: 182 DAYGNVIPIFVFQILRGEPITVFGDGEQTRDFVHVRDVVQANVKAALSREV--SGAFNIA 239
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
S +TL+ + L + GL +++ P+
Sbjct: 240 SGTRITLNDLVDLLRE-TGLSPKVLSGPPR 268
>gi|448465715|ref|ZP_21598907.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814901|gb|EMA64852.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 339
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 40/272 (14%)
Query: 98 LLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVL 157
L+G GH+VT +T G+ ++D F + D A + + V FD V+
Sbjct: 20 LVGDGHDVTCLTRGETDADVPSTVSFRSADRT----------DRAALTDAVADEAFDCVI 69
Query: 158 D----NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHV 212
D + DAV AD Q++F S+ +Y +P + P E +P
Sbjct: 70 DMVCFDAETARDAVAVFAD-----RTDQYVFCSTVDVYHRPPERNPVREDASREPPVSEY 124
Query: 213 QVEKYISENFSNWAS--------FRPQYMIGSG----NNKDCEEWFFDRIVRKRPVPIPG 260
K +E+ A RP G G + ++ DR+ + +P+ + G
Sbjct: 125 AAGKAAAEDVFRAAHGDAFATTIVRPWSTYGEGGPVLHTLGTGTYYVDRVRKGKPILVHG 184
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-E 319
G H D++ AV NP+ A +++ S+ +T + + A+A P E
Sbjct: 185 DGTSLWGPCHRDDVARAFVNAVGNPD-AFGEAYHVTSEETMTWNQYHRRVARALDAPEPE 243
Query: 320 IVHYDPKAAGIDAKKAFPFRNMVFI--FFYSN 349
+VH + AFP R + + F YS
Sbjct: 244 LVHVPTDQ----LRAAFPERTDMLVDHFRYST 271
>gi|15895601|ref|NP_348950.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|337737550|ref|YP_004636997.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
gi|384459060|ref|YP_005671480.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|15025343|gb|AAK80290.1|AE007734_4 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|325509749|gb|ADZ21385.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|336293218|gb|AEI34352.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
Length = 301
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 62/286 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGD--------------------ENSDKMKK 120
+GG IG ++ K LL GH+V++ M G+ EN+ K+++
Sbjct: 6 TGGAGFIGSHVVKSLLEHGHKVSVIDNMVHGNSSNLPDEVNIYKYDISEAEIENAFKIER 65
Query: 121 PPFNRFNEIVSAGGKTVWGDP---AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
P N + +V DP A+V NV+G + + + +
Sbjct: 66 PEVVIHNAAQISVADSV-KDPLYDAKV-NVLGSIN-----------------ILEMCRKY 106
Query: 178 GVKQFLFISSAGI-----YKPADEPPHVEGDVVKPDAGHVQVEKYISENFS----NWASF 228
V++ ++ +SA I Y P DE H + VE Y++ N+
Sbjct: 107 AVRKVIYPASAAIFGEPKYLPIDEK-HPLNMISSYGVSKHTVEHYLNVYKKLYNINYTVL 165
Query: 229 RPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
R + G G + E F +++ + P+ I G+G Q + +V+D++ LA+
Sbjct: 166 RYSNVYGPGQDSSGEGGVVSIFAEKLTKGEPLCIYGNGNQIRDFVYVKDVTEANILALN- 224
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+ ++I+N+ ++ T++ +AKL +A G VEI+H +A I
Sbjct: 225 --SLDNDIYNVSTNTKTTINDLAKLMCEAYGKEVEIMHKGERAGDI 268
>gi|448446377|ref|ZP_21590696.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
gi|445684132|gb|ELZ36517.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
Length = 333
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 31/255 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL + +EV ++ G + PF+ + + G + ++
Sbjct: 12 GGTRFIGRHTVSELLANDYEVGMLNRG------THENPFSDDDRVTHIEGDR--KNERDL 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D V AD V +++ISS Y A+E P EG+
Sbjct: 64 RTAKLSVEPDVVIDCVAYQPADVETAAD--VFGDVDGYVYISSGDSYA-AEEIPKREGET 120
Query: 205 -VKP-------DAG-------HVQVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWF 246
++P D G + ++ + +E + RP + G + + +++
Sbjct: 121 PLRPCTPEQATDDGSNTYGNRKAEGDRVVFAAAEEGVRAMAVRPCIVYGPYDYTERLDYW 180
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR++ V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 181 IDRVLSHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEET 238
Query: 307 AKLCAQAAGLPVEIV 321
+ A AAG E+V
Sbjct: 239 LEAIADAAGADCELV 253
>gi|226357403|ref|YP_002787143.1| NAD dependent epimerase/dehydratase [Deinococcus deserti VCD115]
gi|226319393|gb|ACO47389.1| putative NAD dependent epimerase/dehydratase [Deinococcus deserti
VCD115]
Length = 322
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G ++ + L +GH+V+I+T G +++D++ A + + GD +
Sbjct: 7 GGTQFVGRHIVEAFLAAGHKVSILTRG-KSADELP------------AQVERLQGDRNQG 53
Query: 145 GNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ +T +D +D +G VR A+ + + Q++FIS+ +Y P E
Sbjct: 54 PQGLLALTDRQWDACVDVSGYTPGQVRASAELLRDR-ISQYVFISTVSVYAEPGRHPVRE 112
Query: 202 GDVVKPDAGH--------------VQVEKYISENFS-NWASFRPQYMIGSGNNKDCEEWF 246
D + P A V E+ + + ++ N A RPQ + G ++ ++
Sbjct: 113 DDPLMPPAAEDVTEVTGETYGPLKVACERIVQDVYAENCAILRPQIVAGPYDHTARYPYW 172
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
DR R + PG G + RD + V+ E S +FNL R
Sbjct: 173 VDRASRGGEMLAPGDGSDHVQVIDARDQAR---FTVKVAEEKISGVFNLAGPR 222
>gi|398344916|ref|ZP_10529619.1| UDP-glucose 4-epimerase [Leptospira inadai serovar Lyme str. 10]
Length = 308
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-----MTVGDENS-DKMKKPPFNRFNEI 129
KVL+ +G + +G LA L G + I + GD N D++ + + I
Sbjct: 2 KVLL----TGSNGFVGSRLAPLLKSQGIQTVIVSSNRLATGDTNELDELLSKHSGQIDAI 57
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA- 188
V GG+ +VV D L N++ + +A++A +++F++ISS
Sbjct: 58 VHLGGR---------AHVVHDKEDDPKLAFFKANVETTKLLAEFAIRCKIRKFIYISSVK 108
Query: 189 --GIYKPADEPPHVEGDVVKP--DAGHVQVE-----KYI-SENFSNWASFRPQYMIGSG- 237
G PAD P +E D +P D G ++E +YI S+ + RP ++G+G
Sbjct: 109 ALGERSPADRPLTIE-DEPEPEDDYGGTKLEAENTLRYICSKELLQYTILRPPLIVGAGA 167
Query: 238 -NNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
N D W K+ +P+P +G++ ++ VR+ + ++ EA++ N L
Sbjct: 168 KGNLDRLTWLV-----KKGIPLPFAGIKNKRSLVGVRNFCDAILFSLT--EASTDNRVFL 220
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
VSD +++ + + ++A + + ++ P
Sbjct: 221 VSDSSLSTPELFRAFSRALCVRDSLFYFPP 250
>gi|392943991|ref|ZP_10309633.1| methyltransferase, FkbM family [Frankia sp. QA3]
gi|392287285|gb|EIV93309.1| methyltransferase, FkbM family [Frankia sp. QA3]
Length = 599
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY 232
A+++G+++ +F+S+ GI+ D P HV + E I + +W RP
Sbjct: 88 AEAAGIRRAVFLSTTGIFTSLDPPSKHVR----------IAAEHTIETSGLDWTIIRPTM 137
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +AA
Sbjct: 138 IYGGPDDRNMARLLA--LVRRVPVLPLPGGGRRVHQPVHVDDLAATVLRAL-SADAAVGR 194
Query: 292 IFNLVSDRAVTL 303
+++ RA+ L
Sbjct: 195 GYDVAGPRALPL 206
>gi|330812025|ref|YP_004356487.1| NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699588|ref|ZP_17674078.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
gi|327380133|gb|AEA71483.1| putative NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997043|gb|EIK58373.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
Length = 309
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL GH V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPALELIEGD----VADAA 62
Query: 143 EVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V V+ G + D + + N V + + SGVK+ LF SSA
Sbjct: 63 LVARVMAGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQSGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNN 239
+Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGESIDEETPKAPLTPYASDKLASEFYFDF--YRRQHDLEPVVFRFFNIYGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L A+E PE +
Sbjct: 181 QDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPEVEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP + Y P +G
Sbjct: 241 -NVGWNQATTLKQMLQALAAVVGDLPP--ISYGPARSG 275
>gi|398935330|ref|ZP_10666418.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
gi|398169816|gb|EJM57786.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
Length = 309
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 45/279 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + + G + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD------NPGVELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ L+ S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLYAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYASDKLASEHYFDF--YRRQHGLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ N+ ++A TL M + G P+ V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLEALEAVVG-PLPPVSYGPARSG 275
>gi|322370967|ref|ZP_08045520.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
gi|320549402|gb|EFW91063.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
Length = 323
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVWGD 140
GH IG YL L+ +GHEV ++ G+ N P+ + E V +T +
Sbjct: 10 GH--IGTYLVPRLVRAGHEVVAVSRGERN-------PYQDDSAWTDVESVEIDRETA-EE 59
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
E G + D V+D L++ + + V+ L + ++ P+D P
Sbjct: 60 RGEFGEEIAATNPDAVIDLICFELESAEALVASLRGE-VQHLLHCGTIWVHGPSDVVPTT 118
Query: 201 E---------GDVVKPDAGHVQVEKYI----SENFSNWASFRPQYMIGSG-------NNK 240
E G+ + A ++E Y+ N P +++G G N
Sbjct: 119 EDSPRTRRPLGEYGRKKA---EIEAYLLDEARRNDFPATVLHPGHIVGPGWEPVNPAGNF 175
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D + F R+ R + V +P G++ + H D++ A+EN AA F++VS RA
Sbjct: 176 DTD--VFSRLARGKEVALPNFGLETVHHVHADDVAQGFQRALENWSAAVGESFHVVSPRA 233
Query: 301 VTLDGMAKLCA 311
+TL G A+ A
Sbjct: 234 LTLRGYAEAVA 244
>gi|408403557|ref|YP_006861540.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364153|gb|AFU57883.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 313
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 25/261 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFN----RFNEIVSAGGK 135
+GG IG +L + LL + V I+ + EN + + F R E +S K
Sbjct: 7 TGGAGFIGHHLVRRLLQQDYRVVIIDNLSSAKTENIPRHQNAVFYKEDVRNMETISDIVK 66
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDN--NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
D + VT +V N N++ V + ++GV F+F SSA +Y
Sbjct: 67 RERIDACIHLAAITSVTESLVFSNEVTDVNVNGTASVLEACTNAGVGSFVFASSAAVYGE 126
Query: 194 ADEPPHVEGDVVKPD--------AGHVQVEKYI-SENFSNWASFRPQYMIGSGNN---KD 241
A P E ++P AG VE Y S + S R + G G N
Sbjct: 127 AKILPVPEDKELRPISPYGESKVAGEKLVESYQKSGKIPHAISLRFFNVYGEGQNPRYAG 186
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
F +R+ + P I G GMQ + + D+ + LA+ + + +FN+ + +A+
Sbjct: 187 VITKFTERLSKGLPPVIYGDGMQTRDFISINDVVDAIMLAI---GSGTFGVFNIGTGKAI 243
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T++ +AK + GL + H
Sbjct: 244 TINELAKEMMRMFGLDLRPEH 264
>gi|374985940|ref|YP_004961435.1| putative reductase [Streptomyces bingchenggensis BCW-1]
gi|297156592|gb|ADI06304.1| putative reductase [Streptomyces bingchenggensis BCW-1]
Length = 334
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 108/276 (39%), Gaps = 45/276 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G +A+E L +VT F+R G + GD + V
Sbjct: 7 GGTEFVGRAIAEEALARDWQVTA---------------FHRGRHDPPPGVAALRGDRSAV 51
Query: 145 GNVV-----GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK---PA-- 194
G + G +DVV+D AVR VA + Q+++ISS +Y PA
Sbjct: 52 GGLAALEAPGAGEWDVVVDTWSGAPSAVRDVAR-LLAGRAGQYVYISSRSVYAYPAPAGL 110
Query: 195 -DEPPHVEGDVVKPDAGHVQ-VEKYISENFSNWASF-------RPQYMIGSGNNKDCEEW 245
++ P VEG PDAG V+ + + A+F R ++G N W
Sbjct: 111 DEDGPLVEG---SPDAGEVEYAQAKRGGELAAQAAFGERALLARAGLILGPYENVGRLPW 167
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLD 304
+ RI + PV PG VRDL+ + A E +NLVS T
Sbjct: 168 WLTRISQGGPVLAPGPRELALQYIDVRDLAGWVLDAAER---GLGGPYNLVSPPGQATFG 224
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
+ + CA G E+ DP+ AAG++ P
Sbjct: 225 ELLEACAAVTGSDAELRWTDPEAVLAAGVEPWTELP 260
>gi|448725788|ref|ZP_21708226.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
gi|445797652|gb|EMA48114.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
Length = 324
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 35/255 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL SG+ VT+ G+ + PF E V G +T D
Sbjct: 7 GGTRFIGRHTVTELLDSGYAVTVFNRGNHDD------PFEERVEHVE-GDRTKRTDLERA 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
DVV+D + + VR + G +++ ISS Y ++E P EG+
Sbjct: 60 AER----DLDVVIDCVAYHPEEVRTAIEL---FGDSRYVVISSGAAYG-SEEIPKREGET 111
Query: 205 VKPDAGHVQ---------------VEKYISENFSNWA---SFRPQYMIGSGNNKDCEEWF 246
D Q +++ +S+ ++ A S RP + G + + +++
Sbjct: 112 ALHDCTAEQATDDSQETYGPRKAEIDRVVSDAAADGAEAMSVRPPVVYGPHDYTERFDYW 171
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ V +PG G ++ V D++ L + E E A +N+ R L
Sbjct: 172 LDRVDNHDRVLVPGDGDCLRHLVFVEDVARALRIVAE--EGAPGAAYNVGDRRLPILSEW 229
Query: 307 AKLCAQAAGLPVEIV 321
+L A A VEIV
Sbjct: 230 IELAADALDTEVEIV 244
>gi|410665775|ref|YP_006918146.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
gi|409028132|gb|AFV00417.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
Length = 332
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 18/239 (7%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFN----RFNEIVSAGGKTV- 137
+GG +G ++ L GH+VT + + + + P N + GK +
Sbjct: 6 TGGTGFVGRHIVWRLSAEGHQVTFTGRNERAAQQVLAHSPGNVTWLAIDHASPEAGKQIH 65
Query: 138 ---WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KP 193
G A V + D N+++ V +S GV++ + IS+ +Y +
Sbjct: 66 QASQGHQAVVHTAGLSSPWGRYHDFYSANVESTEQVVSACESQGVQRLIHISTPSLYFRF 125
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISE------NFSNWASFRPQYMIGSGNNKDCEEWFF 247
AD E V+ P H K ++E N FRP+ + G +N
Sbjct: 126 ADCLNIDEDSVLPPPVNHYAATKALAEARIRESRIPNTVLFRPRAIFGPWDNTLMPRLL- 184
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R++ K VP P G ++ ++ +L + LA+ P A S +NL + + + + +
Sbjct: 185 -RVIEKSAVPTPRQGRALVDLTYIDNLVDAVLLALHQPLPARSVTYNLSNGQPICISDL 242
>gi|383620908|ref|ZP_09947314.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ELL +EVT+ G+ + D++ +R ++ + A G+ V
Sbjct: 8 GGTRFIGRHLVDELLAHDYEVTLFNRGNHENPFADDDRVDHVEGDRTDDDALEAAGREV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V + V DV A R AD + ++++SS Y K
Sbjct: 67 -DPDAVFDCVAYYPDDVRT--------ATRIFAD------CEAYVYVSSGAAYGREDIPK 111
Query: 193 PADEPPHVE------GDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKD 241
DE P E D G+ + E +EN N P + G + +
Sbjct: 112 REDETPLAECTAEQATDDSHATYGNRKAEGDRAVFEAAENGVNAIPPPPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V IPG G + +V D++S L + E E + +N R V
Sbjct: 172 RLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASALRIVAERGEPGEA--YNTGDRRLV 229
Query: 302 TLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
T++ M +L A + VE+VH P+ A GI+ + +R
Sbjct: 230 TIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELEDYPLYRE 273
>gi|149918317|ref|ZP_01906808.1| GalE2 [Plesiocystis pacifica SIR-1]
gi|149820843|gb|EDM80252.1| GalE2 [Plesiocystis pacifica SIR-1]
Length = 324
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI------ 129
K+LI +GG +G L + LG+ H +TI+ +D P R+ E
Sbjct: 2 KILI----TGGAGFVGQAL-RRALGNEHTLTILDTAPAPADL---GPSTRWIEASILDEA 53
Query: 130 ----VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
AG + V+ A +G D+V N ++AV +A + V+ LF
Sbjct: 54 ALREAFAGQQAVFHLAAALGVRACQEREDIVEQVNVGGMEAV--IAAAIATPSVEHLLFT 111
Query: 186 SSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISENFSN-------WASFRPQY 232
SS+ IY EP + E D P + + V EK ++ ++ + +FR
Sbjct: 112 SSSEIYGDG-EPGRIFREQDEPAPRSAYGRSKVAGEKLMAAAAASPEGARLSYTAFRLFN 170
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVENPE----A 287
G G D F R + P+ G G+Q + D+++ + A+E A
Sbjct: 171 AYGPGQRADFVVPAFCRAALQGEAPVVHGDGLQTRTFTFIEDIAAAMVAALERRAPARAA 230
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMV 342
S +FNLVS+ +T+ +A+L +AG +++H D + + K F V
Sbjct: 231 GSFEVFNLVSEETLTIASLAQLVCLSAGEQPQVIHRDHEDPSVGRSKRFEVSRRV 285
>gi|398940755|ref|ZP_10669433.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
gi|398162372|gb|EJM50568.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
Length = 315
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-------KT 136
+GG IG +L + LL SG+ V ++ D +S K+ P +R + + G +
Sbjct: 9 TGGAGFIGSHLVEALLESGYSVRVLD--DLSSGKLSNLPIDRCHLTLVVGDVADAPTVER 66
Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
D + V ++ + +D+ + N + + + +GV++ ++ SSA IY
Sbjct: 67 AMKDCSAVVHLAAVASVQASVDDPVATHQSNFVGTLNICEAMRQAGVRRVVYASSAAIYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG---------SGNNKD-- 241
E + D K +K SE+F ++ +R Q+ + G +D
Sbjct: 127 NNGEGMAITEDTPKNPLTPYAADKLASEHFLDF--YRRQHGLEPVILRFFNIYGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R +K P+ + G G Q + +V DL +L AV E + + N+
Sbjct: 185 SPYSGVISIFSERAQKKLPITVYGDGEQTRDFVYVNDLVKVLVQAVSESEPINEPV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+R+ +++ +A ++ G + + + P++ I +A
Sbjct: 244 FNRSTSVNELAATLSELLGRSLTLNYDAPRSGDIKHSRA 282
>gi|418737924|ref|ZP_13294320.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410746098|gb|EKQ99005.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 330
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 34/263 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVKGDIRDQNLLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y ++NF+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDNFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDVYLVLLRAPKEKIAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
T+ +A + + G V++V
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLV 264
>gi|448501408|ref|ZP_21612198.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
gi|445695200|gb|ELZ47310.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
Length = 330
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPNVVVDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNW------------------ASFRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDSHETYGNRKAEGDRAVFAAAEEGVAATAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L +A E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRIAAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A AA + E+V
Sbjct: 231 TLRETLETIADAADVECEVV 250
>gi|433638117|ref|YP_007283877.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
gi|433289921|gb|AGB15744.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
Length = 337
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG +L +ELL ++VT+ G+ + PF + + G +T GD E
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTLFNRGNHEN------PFADTDGVDHVQGDRTDDGDLVE 61
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV--- 200
V FD V +++ V D V +++ISS Y D P
Sbjct: 62 AAAVEPDAVFDCVA-YFPRDVRQATTVFD-----DVDAYVYISSGAAYGREDLPKREGFT 115
Query: 201 -------------EGDVVKPDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKDCEE 244
E D P + ++ + E + N S RP + G + + +
Sbjct: 116 PLCECTDEQAIADESDTYGP--RKAEGDRAVFEAAADGVNAMSVRPPIVYGPHDYTERLD 173
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DRI R V +PG G + +V D++S + + E E S +N+ RAVTL
Sbjct: 174 YWIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAEEGEPGES--YNVGDQRAVTLR 231
Query: 305 GMAKLCAQA 313
GM +L ++
Sbjct: 232 GMLELIDES 240
>gi|376004404|ref|ZP_09782113.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
gi|375327218|emb|CCE17866.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
Length = 108
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFR 339
++N+ DR VT DG+AK CA AAG ++++HYDPK +KAFP R
Sbjct: 1 MYNISGDRFVTFDGLAKACAIAAGESPDDLQLIHYDPKNFDFGKRKAFPLR 51
>gi|406974854|gb|EKD97809.1| Isoflavone reductase [uncultured bacterium]
Length = 331
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 39/266 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG +G +L L +GH+VT G E +D + G
Sbjct: 2 QILIL----GGTVFLGRHLVDAALNAGHQVTTFRRGRERAD-------------LPEGVA 44
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS----AGIY 191
T+ GD + +D V+D +G V A A SS V Q++FISS A +
Sbjct: 45 TIIGDRRGDHAELRYGQWDAVVDCSGYFPAHVASAAK-ALSSHVGQYIFISSVLQYADLS 103
Query: 192 KPA--DEPPHVEGDVVKPDAGH--------VQVEKYISENFSNWAS-FRPQYMIGSGNNK 240
KP ++ P +G+ + P + E+ + + F A+ RP Y++G +
Sbjct: 104 KPGIREDDPSAQGNFIFPPPLNELTYGPLKAMCEQEVLQVFPGRATILRPGYLVGPRDRS 163
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV--SD 298
+ + R + +PGSG + VRDL++ + +E ++ IFN+ S
Sbjct: 164 ERFPTWVRRASMGGVMLVPGSGNRAWQFIDVRDLAAWIISIIER---RTTGIFNVTGPSC 220
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYD 324
R M ++ + A G P+ I H D
Sbjct: 221 RECAGSLMDRIVSAAGGSPI-IRHID 245
>gi|378953138|ref|YP_005210626.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
gi|359763152|gb|AEV65231.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
Length = 309
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD--NPAV----ELIEGDVAD 60
Query: 144 VGNVVGGVT-----------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V +T D + + N V + + SGVK+ LF S
Sbjct: 61 AALVARAMTGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQSGVKRVLFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEETPKAPLTPYASDKLASEFYFDF--YRRQHDLEPVVFRFFNIYG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E PE
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPEVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ N+ ++A TL M + A G LP + Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLQALAAVVGDLPP--ISYGPARSG 275
>gi|406935036|gb|EKD69122.1| Nucleoside-diphosphate-sugar epimerase [uncultured bacterium]
Length = 339
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 21/230 (9%)
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
D KK P F I + D E + D V+D + + + P A A
Sbjct: 42 DYEKKWPGRVFRHIADRSSPLNFCDALEK---IALKKIDAVIDMSCYTKEELTP-AIRAF 97
Query: 176 SSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGH--VQVEK---YISENFS-N 224
S + Q++FIS+ +Y PA E ++ G ++ EK Y ++N N
Sbjct: 98 SKKISQYIFISTCSVYGVLKYLPASEEHPLDTGESNSMYGREKIKCEKELLYSAKNKDFN 157
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVE 283
RP Y+ G + + +F DRI ++ P+ P G N +V+DL+ + +
Sbjct: 158 VTILRPTYIYGPWDYTERLFYFIDRIYKQVPIFFPSGGQDPMFNAIYVKDLARQIAGLLL 217
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YDP--KAAG 329
N E A + I+N S+ ++ KL + V++VH YD KAAG
Sbjct: 218 N-EGAYNQIYNAASNDSLYFSEFLKLIGNSLSQEVKLVHVSYDEYKKAAG 266
>gi|21220686|ref|NP_626465.1| reductase [Streptomyces coelicolor A3(2)]
gi|7799239|emb|CAB90862.1| putative reductase [Streptomyces coelicolor A3(2)]
Length = 366
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 122/305 (40%), Gaps = 42/305 (13%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P RR S +A + ++L++ GG +G + + LG G EVT++ G
Sbjct: 2 PPLCRRQSGVPSGRRARHSGGMRLLVL----GGTEFVGRSVVEAALGRGWEVTVLHRG-- 55
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-TFDVVLDNNGKNLDAVRPVAD 172
+ PP R G +T P + + G T+D V+D AVR A
Sbjct: 56 ---RHAPPPGVRALH----GDRTA---PDGLTALTGAEDTWDAVVDTWSAAPRAVRDAAR 105
Query: 173 WAKSSGVKQFLFISSAGIY--KP----ADEPPHVEGDVVKPDAGHVQ-------VEKYIS 219
+ +++++SS +Y P A++ P VEG DAG E +
Sbjct: 106 LLRQR-AGRYVYVSSCSVYAWAPPAGYAEDAPLVEG--ASADAGQRDYARDKRGAELAVL 162
Query: 220 ENFSNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+ F S R ++G N W+ +R+ R PV PG VRDL+
Sbjct: 163 DAFGADRSVLVRAGLILGPYENVGRLPWWLNRLARGGPVLAPGPRDLPLQYIDVRDLADW 222
Query: 278 LTLAVENPEAASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAK 333
+ AVE S +NLVS T+ G+ + CA G E+ P+ AAGI+
Sbjct: 223 VLGAVER---ELSGPYNLVSPPGHTTMGGLLEACATVTGGTAELRWTSPETVLAAGIEPW 279
Query: 334 KAFPF 338
P
Sbjct: 280 VQLPV 284
>gi|410666645|ref|YP_006919016.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
gi|409104392|gb|AFV10517.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
Length = 316
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVWGD 140
+GG IG +L LL G +VT++ +N D P R N K V D
Sbjct: 7 TGGAGFIGSHLVDRLLAEGWQVTVV----DNFDPFYDPEIKRKNIAPHFDYGSYKLVEVD 62
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++G + +T +DV++ K N+ + + + AK GVKQF
Sbjct: 63 IRDLGALREQLTGEYDVIVHLAAKAGVRPSIRDPIGYQDVNVRGTQNLLELAKEWGVKQF 122
Query: 183 LFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYISENFSN-----WASFRPQYM 233
+F SS+ +Y P E D V P A + + +S+ + + R +
Sbjct: 123 VFASSSSVYGVNPHVPWREDDCVLMPISPYAATKVAGELLGHVYSHLYGIRFIALRFFTV 182
Query: 234 IGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G D F R++ KR P+P+ G G + ++ D+ + A++ + +
Sbjct: 183 YGPRQRPDLAIHKFARLMLKREPIPVYGDGTSRRDYTYIDDIIQGVRAAMDYTK-TQYEV 241
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
NL ++R V+L + + + G+ ++ + P+ +
Sbjct: 242 INLGNNRTVSLMELIRALEEVLGVEAKLEYLPPQPGDV 279
>gi|322369860|ref|ZP_08044422.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
gi|320550196|gb|EFW91848.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
Length = 329
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAE 143
GG IG +L +LL +G++VTI G N N A G + + GD +
Sbjct: 8 GGTRFIGRHLVTDLLDNGYDVTIFNRG------------NHDNPFADADGVSHFEGDRTD 55
Query: 144 VGNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-------KP 193
G + V ++V+D VR + + V +++ISS Y +
Sbjct: 56 DGALEAARDEVDPNIVIDCVAYKPREVRAATEIF--ADVDGYVYISSGSAYGNEVIPKRE 113
Query: 194 ADEPPHVEGDVVKPDAGH-------VQVEKYI---SENFSNWASFRPQYMIGSGNNKDCE 243
D D D H + ++ I +E N S RP + G + +
Sbjct: 114 NDTELCACTDEQATDDSHDSYGPRKAEGDRAIFEAAERGVNAMSVRPCIVYGPYDYTERL 173
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR+ + + +PG G + A+ D++S L + E E +N+ +R VT+
Sbjct: 174 DFWIDRVNERDRLVVPGDGQNVWHRAYAEDVASALRIVAE--EGDPGEAYNVGDERLVTM 231
Query: 304 DGMAKLCAQAAGLPVEIVH 322
D M L A A VE+VH
Sbjct: 232 DEMLSLIADALDTDVELVH 250
>gi|423097596|ref|ZP_17085392.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
gi|397885474|gb|EJL01957.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
Length = 309
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL GH V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPAVELIEGD----VADAA 62
Query: 143 EVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V V+ G + D + + N V + + GVK+ LF SSA
Sbjct: 63 LVARVMSGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQVGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNN 239
+Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGQSIDEETPKAPLTPYASDKLASEFYLDF--YRRQHALEPVVFRFFNIYGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L A++ PE +
Sbjct: 181 QDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIKKPEVEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M K A+ G LP + Y P +G
Sbjct: 241 -NVGWNQATTLKQMLKALAEVVGDLPP--ISYGPARSG 275
>gi|334132694|ref|ZP_08506450.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
gi|333442178|gb|EGK70149.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
Length = 316
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--------V 214
N+D R +A+ A ++GV++FLFISS G+ P + P E D P + + +
Sbjct: 94 NVDGTRRLAEQAAAAGVRRFLFISSIGVNGPRADRPFTEDDRPAPQGSYAESKLEAETAL 153
Query: 215 EKYISENFSNWASFRPQYMIG---SGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNI 268
+ W RP + G GN F R+VR R VP+P G+ +
Sbjct: 154 REVCGRTGMEWVVIRPPLVYGPHAPGN--------FARLVRWMARGVPLPLGAVHNRRTL 205
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ +L ++ + + EAA+ +F +++ + + AQA G
Sbjct: 206 VAIDNLVDLIVTCLHS-EAAAGQLFLAGDGESLSTPELLRTVAQARG 251
>gi|448315235|ref|ZP_21504887.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445612312|gb|ELY66043.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 329
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 41/265 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL G++VT+ G + PF + + G E
Sbjct: 8 GGTRFIGRHLVDELLEHGYDVTLFNRG------THENPFADDDRVARIEGDRTNDSALEA 61
Query: 145 GNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ G FD V A R AD + ++F+SS Y +E P EG
Sbjct: 62 AALEVGPDAVFDCVAYYPKDVQAATRIFAD------CEAYVFVSSGAAYG-REEIPKREG 114
Query: 203 DVVKPDAGHVQVEKYISENFSNWA---------------------SFRPQYMIGSGNNKD 241
+ P AG E+ + ++ + + + RP + G + +
Sbjct: 115 ET--PLAG-CTPEQAVDDSGATYGPRKAEGDRAVFAAAERGVRAMAVRPCIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V +PG G + A+V D++S L L E +A + +N+ R
Sbjct: 172 RLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAERGDAGEA--YNVGDRRLA 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK 326
TL+ +L A VE+V P+
Sbjct: 230 TLEETLELIADVLDTTVEVVTAGPR 254
>gi|408404923|ref|YP_006862906.1| UDP-glucose 4-epimerase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365519|gb|AFU59249.1| putative UDP-glucose 4-epimerase [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 324
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 46/265 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----G 139
+GG IG ++ EL+ G E ++ D + N +V G ++ G
Sbjct: 9 TGGAGFIGSHIVDELIARGIETYVI-------DNLST---GTLNNLVQHRGNSLLHFMAG 58
Query: 140 DPAEVGNVVGGVTFDVVLDN----------------NGKNLDAVRPVADWAKSSGVKQFL 183
D E ++ DVV + N++ + ++ SGVK+F+
Sbjct: 59 DVREAEALLQDTNIDVVFHEAAIASVPKSVSHPLLVHDVNVNMTLHLLNYCVKSGVKRFI 118
Query: 184 FISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA--SFRPQYMIGSG 237
F SSA +Y E E +P+ AG + +E Y+ + + +Y G
Sbjct: 119 FASSAAVYGIL-ESKATEDMACRPNSPYGAGKLAIEDYLHAYRRTYGLETVMLRYFNVYG 177
Query: 238 NNKDCEEW------FFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ ++ F ++++ +RPV I G G+Q + HV D+ LA+++ AA
Sbjct: 178 PRQIYSDYSGVITIFINKLLEGERPV-IFGDGLQVRDFVHVSDIVQANMLAMDSA-AAVG 235
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG 315
+FN+ S RA + M K+ + G
Sbjct: 236 EMFNVASGRATNILEMVKIIKKLMG 260
>gi|111221487|ref|YP_712281.1| hypothetical protein FRAAL2051 [Frankia alni ACN14a]
gi|111149019|emb|CAJ60700.1| hypothetical protein; putative SAM domain [Frankia alni ACN14a]
Length = 595
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
+++G+++ +F+S+ GI+ D P + E I + W RP +
Sbjct: 89 RAAGIRRAVFLSTTGIFTALDPPSKRV---------RIAAEHTIETSGLEWTIIRPTMIY 139
Query: 235 GSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +AA +
Sbjct: 140 GGSDDRNMARLLA--LVRRVPVLPLPGGGRRLHQPVHVDDLAATVLRAL-SADAAVGRGY 196
Query: 294 NLVSDRAVTL 303
++ RA++L
Sbjct: 197 DVAGPRALSL 206
>gi|226229173|ref|YP_002763279.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
gi|226092364|dbj|BAH40809.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
Length = 339
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 42/238 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AE 143
GG IG +L + L GH +T+ N + K F + +++ GD A
Sbjct: 7 GGTGFIGPHLVEYALSRGHTLTLF-----NRGRTKPGLFPKAEQLI--------GDRNAP 53
Query: 144 VGNV-VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK---------- 192
G+ + G T+DVV D V A K V Q++++SS YK
Sbjct: 54 DGHAALAGRTWDVVFDLPATTPQWVVNAAAVLKGK-VDQYVYVSSTAAYKDFARSFPDET 112
Query: 193 -PADEPPHVEGDVVKPDAG-------HVQVEKYISENFSNWASF-RPQYMIGSGNNKDCE 243
P +P + G PDA V+ E+ + E F N A+ RP ++G G+ D
Sbjct: 113 HPTQDPAPITG----PDAAAAPFGNKKVRCEQLVQEAFGNGATIVRPGLIVGPGDLTDRF 168
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
++ RI + V PG RDL+ + VE+ ++ +FN V R V
Sbjct: 169 TYWPVRIEKGGEVLAPGKLEDPAQWIDARDLAEWMVRMVES---RTTGVFNAVGPRTV 223
>gi|398886471|ref|ZP_10641348.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398189786|gb|EJM77052.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 309
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 41/277 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV---------- 130
+GG IG +L LL GH V I+ + G ++ + P R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILDDLSTGKRSNLALDNP---RVELIVGDVADAALVA 65
Query: 131 -SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + A V +V V D + + N V + + SGVK+ LF SSA
Sbjct: 66 RAMAGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQSGVKRVLFASSAA 123
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 124 VYGNNGEGQSIDEDTPKEPLTPYASDKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQ 181
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R P+ + G G Q + +V DL +L A+E P+ +
Sbjct: 182 DPSSPYSGVISIFSERAQNGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV- 240
Query: 294 NLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP V Y P +G
Sbjct: 241 NVGWNQATTLKQMLEALKVAVGELPP--VSYGPARSG 275
>gi|389820968|ref|ZP_10209953.1| NAD-dependent epimerase/dehydratase [Planococcus antarcticus DSM
14505]
gi|388462658|gb|EIM05059.1| NAD-dependent epimerase/dehydratase [Planococcus antarcticus DSM
14505]
Length = 320
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVLI+ GG + +G ++ ++LL GHEV + G N + F E+ K
Sbjct: 2 KVLII----GGTSFVGRHIVEKLLEKGHEVVLFNRGKSNP--------SVFPEL-----K 44
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ GD + + ++ V+D + + P+ + + + FIS+ +Y
Sbjct: 45 RILGDRRKDAAKLANEKWEAVIDTSTYTPADLEPILE---NILTDHYTFISTISVYTDFK 101
Query: 196 EPP----------HVEGDVVKPDAG---HVQVEKYISENFSNWASF-RPQYMIGSGNNKD 241
+ P V+GD V + V E+ I E + A RP ++G + D
Sbjct: 102 QGPVKENASVFEKKVQGDKVTGETYGPFKVMCERLIEERLGDRALIIRPGIVVGPADPTD 161
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++ ++ K PV IPGS RDL+ V E ++ IFN+ +D
Sbjct: 162 RFTYWTIKLNGKGPVLIPGSKKSKVQWIDARDLAE---FTVSQMEKKATGIFNVAAD 215
>gi|406961667|gb|EKD88310.1| hypothetical protein ACD_34C00617G0005 [uncultured bacterium]
Length = 329
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 29/259 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG +I A + G ++T++ G + P +I++A
Sbjct: 2 KVLFI----GGTGIISTACATRAIEKGIDLTLLNRGKSSR------PTAEGAKIINADIH 51
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-PA 194
DP + +V+ G FDVV+D V+ D+ S Q++FISSA Y+ PA
Sbjct: 52 ----DPTSIRSVLAGKDFDVVVDWIAYTPQDVQKDLDFF-SGKTGQYVFISSASAYQTPA 106
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR----PQYMIGSGNNKDCEEW----- 245
P E ++ K E A +R P ++ + D
Sbjct: 107 SNLPIRESTPLQNPFWEYSRNKIACEELLV-AEYRKSKFPFTIVRPSHTYDRTSLPIEGG 165
Query: 246 --FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
DR+++ +PV + G G + H D + + N A + IF++ SD +T
Sbjct: 166 YTVIDRMLKGKPVIVHGDGTSIWTLTHNTDFAKGFVGLLGNSRA-TGEIFHITSDEWLTW 224
Query: 304 DGMAKLCAQAAGLPVEIVH 322
+ + + A AAG+ ++VH
Sbjct: 225 NQIHLMLADAAGVTPQLVH 243
>gi|15605715|ref|NP_213092.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
gi|2982870|gb|AAC06490.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
Length = 315
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 48/244 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----------PPFNRFNEIVSAG 133
+G +G ++ +ELL G+EV G N K+++ F+ + I A
Sbjct: 6 TGATGFVGRHIVRELLNRGYEVH---AGVRNLSKLERLFGNQVKGYIVNFDEKDSIREAL 62
Query: 134 GKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
GK +P V +++G G+TF+ V + KNL V +K VK+FLF+
Sbjct: 63 GKV---NPDFVIHLIGILYEEKKKGITFERVHYGHTKNLVEV------SKGFNVKKFLFM 113
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
S+ G + DE P + E+ + + N+ FRP ++G ++
Sbjct: 114 SALGTH---DEAPS------RYHQTKRWAEREVINSGLNYTIFRPSIILGPE-----QKL 159
Query: 246 FFD--RIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
FFD +I + P V +P G VRD++ A++NPE I+ L + VT
Sbjct: 160 FFDMYKITKYIPVVALPDFGNYQFQPVDVRDVACAYAEALKNPE-TDRKIYELCGTKVVT 218
Query: 303 LDGM 306
+
Sbjct: 219 FKEL 222
>gi|313127087|ref|YP_004037357.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|448288445|ref|ZP_21479644.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|312293452|gb|ADQ67912.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|445569596|gb|ELY24168.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
Length = 330
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 34/282 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL G+ V I G+ + PF + + G D ++
Sbjct: 9 GGTRFIGRHTVEDLLDHGYAVAIFNRGNHEN------PFADDDRVTHVEGDR--KDEMDL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ D+V+D V D + V +++ISS Y +E P EG+
Sbjct: 61 KAAKLSIEPDIVIDCVAYQPADVEAAVD--IFADVDAYVYISSGAAYG-REEIPKREGET 117
Query: 205 VKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEWF 246
D Q ++ N S RP + G + + +++
Sbjct: 118 PLCDCTPEQAASDSDASYGPRKAEGDRIVFDAAMDGVNAMSIRPCIVYGPDDYTERLDYW 177
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ V +PG G + A+V+D++S L + E S +N+ R VTL+ M
Sbjct: 178 IHRVETYDRVVVPGDGTNVWHRAYVKDVASALRVVAERGTPGES--YNVGDRRLVTLEEM 235
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMVFIF 345
+ A AA VE+VH + AAG++ +R +
Sbjct: 236 VECIADAADTSVEVVHAGERELAAAGLEPDDFILYREYPHVL 277
>gi|84684183|ref|ZP_01012085.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Maritimibacter alkaliphilus HTCC2654]
gi|84667936|gb|EAQ14404.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Rhodobacterales bacterium HTCC2654]
Length = 327
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISEN 221
NL R V D A+ GV++F+ +SS+ +Y D+ E D + K +SE
Sbjct: 92 NLIGTRNVVDLARRLGVRRFVQVSSSTVYFALRDQLDLREDDPLPKPFNQYARTKRLSEE 151
Query: 222 FSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G+G+ R+++ +RP+P+ G ++ HV
Sbjct: 152 IALAAPDIGPLAIRPRGLYGAGDTV-----LLPRLLKTAAERPLPLLRGGAARIDLTHVE 206
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQA 313
D+ + + ++ P +A +FN+ + + +A+ CA+A
Sbjct: 207 DVVAAIIAGLDAPTSAEGEVFNVTGGETIPVTRLAESACARA 248
>gi|398339519|ref|ZP_10524222.1| UDP-glucose 4-epimerase [Leptospira kirschneri serovar Bim str.
1051]
gi|418678763|ref|ZP_13240037.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687825|ref|ZP_13248984.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742328|ref|ZP_13298701.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400321953|gb|EJO69813.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410738149|gb|EKQ82888.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750686|gb|EKR07666.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 330
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 34/263 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVKGDIRDQNLLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y ++NF+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDNFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKIAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
T+ +A + + G V++V
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLV 264
>gi|149182253|ref|ZP_01860733.1| possible isoflavone reductase [Bacillus sp. SG-1]
gi|148850022|gb|EDL64192.1| possible isoflavone reductase [Bacillus sp. SG-1]
Length = 336
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG + +G ++A+ L GHEVT+ N K F + +++ G+ GD
Sbjct: 7 GGSSFVGKHIAQTALSKGHEVTLF-----NRGKTNPHLFPQAEKLIGDRGQ---GDLTAL 58
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP--------A 194
E G+ +DVV+D +G V A K + +++FISS +YK
Sbjct: 59 EKGD------WDVVIDTSGYTPGKVEQSAALLKGR-INRYIFISSISVYKEFLTGEAKEG 111
Query: 195 DEPPHVEGDVVKPDAGHVQ------VEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFF 247
DE +E + V+ G E+ + + S RP ++G + D ++
Sbjct: 112 DETGTLENEGVEEVNGETYGPLKALCEQKLEQILPGKVLSIRPGLIVGPDDTTDRFTYWV 171
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
R V +PGS + VRDL+ + L E EA N
Sbjct: 172 QRFSEGGEVLVPGSKERAIQWIDVRDLAQWIILMAEEGEAGIYN 215
>gi|170782054|ref|YP_001710386.1| oxidoreductase [Clavibacter michiganensis subsp. sepedonicus]
gi|169156622|emb|CAQ01774.1| putative oxidoreductase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 321
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 79 IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTV 137
+V + GH IG +L L+ SGH+V ++ G + + P ++R + V +
Sbjct: 3 VVVIGATGH--IGTFLVPRLVDSGHDVVAVSRGTREPYR-QSPLWDRVERVRVDRDAEDA 59
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
G A + + + +VV+D + R + + + V+ + I S + +
Sbjct: 60 AGTFA---DRIAALAPEVVVDLVCFTPASARHLVEGLRGR-VRHLVHIGSIWTHGLSTAL 115
Query: 198 PHVEGDVVKPDAGH----VQVEKY-ISENFS---NWASFRPQYMIGSG-------NNKDC 242
P E D +P + ++E+Y I+E+ P ++ G G N D
Sbjct: 116 PLREDDPKEPFGEYGVQKAEIERYLIAESRGGGLQCTVVHPGHISGGGWPVITPVGNLDP 175
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W + P+ +PGSG + + H D++ ++ LA+ N E + F+ VSDRA++
Sbjct: 176 AVWTA--LAAGDPLAVPGSGSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALS 233
Query: 303 LDGMAKLCAQAAGLPVEIVHYD 324
+ G A+ A G E+ H D
Sbjct: 234 VRGFARAAAAWFGREPELEHLD 255
>gi|398838659|ref|ZP_10595933.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
gi|398115530|gb|EJM05312.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
Length = 309
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P N +V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLE--NPLV----ELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ LF S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHDLEPVVFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ N+ ++A TL M A L A LP V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLAALEAVVGKLPP--VSYGPARSG 275
>gi|386817844|ref|ZP_10105062.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
gi|386422420|gb|EIJ36255.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
Length = 309
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 51/295 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G Y+ LL +G+ ++ + + K + V+ G DPA +
Sbjct: 7 GGTGFVGSYVIDALLDAGYAPRVLV---RSGSEYK---LTQAERCVTVPGDI--SDPAAL 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDA------------VRPVADWAKSSGVKQFLFISSAGIYK 192
GN + G + L + A V A+ GVKQF+ +S+ G+
Sbjct: 59 GNCLQGADTVIYLIGILREFPAKGITYEETQFRGVERTVAAAQKQGVKQFILMSANGVKA 118
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS--GNNKDCEEWFFDRI 250
G D + E+ + + W FRP + G GN + C + D+
Sbjct: 119 ---------GGTAYQDT-KFRAEQCVQASGLGWTIFRPSVIFGDPRGNMEFCTQ--LDKE 166
Query: 251 VRKRPVPIP---------GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+ + P+P P +G HV+D++S AV NP AA+ +F L A
Sbjct: 167 LVQPPIPAPLFFGGLNIMQAGQFQMAPVHVQDVASAFAAAVGNP-AANQRVFPLCGPDAP 225
Query: 302 TLDGMAKLCAQAAG------LPVEIVHYDPKAAGIDAKKAFPF-RNMVFIFFYSN 349
T + + AQ AG LP A+ +D + FP R+ + + N
Sbjct: 226 TWKAILQTIAQVAGGKGKLMLPAPADVIKLVASVLDGQAWFPITRDQITMLLEGN 280
>gi|432328689|ref|YP_007246833.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
gi|432135398|gb|AGB04667.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
Length = 292
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 223
+ ++A+ ++ F++ISSA IY + P E P + + + K E ++
Sbjct: 85 LLEYARRRDIEHFIYISSAAIYGEPEYLPIDEKHPKNPKSPY-GLSKLTGETYAMMYGEL 143
Query: 224 ---NWASFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
AS RP + I S + F DR R P+ I G G Q + +V D+
Sbjct: 144 YGLKVASIRP-FNIFSPRQDPSSPYSGVISIFVDRAKRGLPLVIYGDGEQTRDFVNVHDV 202
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
S++ + E ++ ++N + R ++++ +A++ + +G V I+H P+ I
Sbjct: 203 VSLIKIV---SEKKATGVYNCATGREISINKLAEMIKELSGKDVPIMHDKPRDGDI 255
>gi|238062666|ref|ZP_04607375.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
gi|237884477|gb|EEP73305.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
Length = 342
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 51/277 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-------------------- 123
+GG IG +L + L+ +GH VT++ D + ++ P
Sbjct: 7 TGGAGFIGSHLVESLVRNGHRVTVLD--DLSGGSRQRVPAGVDLAVGSVTDVDFVDSLFA 64
Query: 124 -NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
NRF + ++ V N G N+ + + + +GV+ F
Sbjct: 65 ENRFERVFHFAAFAA-----------EAISHSVKQLNYGTNVMGSINLINASLRTGVRFF 113
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN---------WASFRPQYM 233
F SS +Y + P + VV A + KY+ E + +FR +
Sbjct: 114 CFASSVAVYGHGETP--MRESVVPVPADSYGLAKYLVERELEVTMRTQGLPFTAFRMHNV 171
Query: 234 IGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
G N ++ FF++I+R P+ + G G Q +V D+ ++++ A E EAA
Sbjct: 172 YGEWQNMRDPYRNAVAIFFNQILRGEPITVYGDGGQVRAFTYVGDVVNVVSRAAET-EAA 230
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
FN+ S T+ +A+ AAG+P + + P
Sbjct: 231 WGRAFNVGSSSTNTVLELAQAVRSAAGVPEHPIAHLP 267
>gi|448480283|ref|ZP_21604536.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
gi|445822222|gb|EMA71994.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
Length = 351
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 30 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 86
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 87 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 133
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 134 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 193
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 194 RLDYWIDRVLTHDRVAVPGDGQNLWHRAYVEDVASALRVVAERGEPGAA--YNVGDRRAL 251
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A AG+ E+V
Sbjct: 252 TLRETLETIADVAGVDCELV 271
>gi|147921593|ref|YP_684590.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
gi|56295560|emb|CAH04802.1| dtdp-glucose 4,6-dehydratase [uncultured archaeon]
gi|110619986|emb|CAJ35264.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
Length = 312
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDEN--SDKMKKPPFNRFNE-------IVS 131
+GG IG +L LL GHEVT+ ++ G + P F+ NE I S
Sbjct: 6 TGGAGFIGSHLTDRLLEEGHEVTVVDNLSGGQFRFIEHHVTNPEFSFVNEDLARDGLISS 65
Query: 132 A--GGKTVWGDPAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFIS 186
A G V+ A +V GVT D +N A V + +++GV++ F S
Sbjct: 66 AFEGADMVYHLAANP-DVRSGVT-----DTRTPLTQNTIATFNVLESMRAAGVRKIAFTS 119
Query: 187 SAGIYKPADEPPHVEG-----DVVKPDAGHVQVEKYISE-----NFSNWASFRPQYMIGS 236
++ +Y A+ P E + A + E IS + +W +R +IGS
Sbjct: 120 TSTVYGEAEVIPTPENYGPLMPISLYGASKLACEAMISAYCHTFDMQSWI-YRFANIIGS 178
Query: 237 GNNKDCEEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ FD I R R P I G+G Q + H+ D + AV N A NI
Sbjct: 179 ---RGTHGVIFDFIGRLRKDPSKLTILGNGRQSKSYLHISDCVDGMLFAVRNSNAPV-NI 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
FN+ SD + G+A+ A GL E V ++ K PF +
Sbjct: 235 FNIGSDDRFDVTGIARAVASEMGL--ENVEFEYTGGDRGWKGDVPFMTL 281
>gi|398879871|ref|ZP_10634952.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
gi|398195189|gb|EJM82240.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
Length = 309
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 41/277 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV---------- 130
+GG IG +L LL GH V I+ + G ++ + P R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILDDLSTGKRSNLALDNP---RVELIVGDVADAALVA 65
Query: 131 -SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + A V +V V D + + N V + + SGVK+ LF SSA
Sbjct: 66 RAMAGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQSGVKRVLFASSAA 123
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 124 VYGNNGEGQSIDEDTPKEPLTPYASDKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQ 181
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R P+ + G G Q + +V DL +L A+E P+ +
Sbjct: 182 DPSSPYSGVISIFSERAQNGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV- 240
Query: 294 NLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP V Y P +G
Sbjct: 241 NVGWNQATTLKQMLEALKVAVGELPP--VSYGPARSG 275
>gi|336402015|ref|ZP_08582759.1| hypothetical protein HMPREF0127_00072 [Bacteroides sp. 1_1_30]
gi|423213735|ref|ZP_17200264.1| hypothetical protein HMPREF1074_01796 [Bacteroides xylanisolvens
CL03T12C04]
gi|335947617|gb|EGN09402.1| hypothetical protein HMPREF0127_00072 [Bacteroides sp. 1_1_30]
gi|392693664|gb|EIY86895.1| hypothetical protein HMPREF1074_01796 [Bacteroides xylanisolvens
CL03T12C04]
Length = 373
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
+KKKVL++ GG + + KE L G ++T++ G KK + + I+
Sbjct: 2 DKKKVLLL----GGTGTLSMGVLKEALNKGWDITVLNRGIH-----KKHIPDSVHRIIGD 52
Query: 133 GGKT-VWGDPAEVGNVVGGVTFDVVLD---NNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
K W + N FDVV+D N ++ V P+ + KQ++FISSA
Sbjct: 53 FKKVETWKEALHSCN------FDVVVDFLSRNPADISRVFPIL----KNNCKQYIFISSA 102
Query: 189 GIYKPADEPPHVEGDVVKPD-AGHVQVEKY--------ISENFSNWASFRPQYM------ 233
+Y+ +E ++ D KP+ + VEKY +S+N + + Y+
Sbjct: 103 CVYRRNEEDFPIKEDSPKPNMSWDYNVEKYNSEKELVKLSQNAPCYYTIIRPYITYDDER 162
Query: 234 --IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
G + +R+ +P+ + G T + +V D + + N AA +
Sbjct: 163 IPFGIAPSYKYHRTIIERLKNGKPMFVWNEGNNITTLTYVSDFAKGVVGLFSN-NAAINE 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
F++ SD T + + L I H D K
Sbjct: 222 DFHITSDYQYTWNDFWSIFLAKLNLKSTIYHVDAK 256
>gi|406943288|gb|EKD75324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [uncultured
bacterium]
Length = 315
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 45/259 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--P 141
+GG IG LAK LL G +V I D + F+ + G W D
Sbjct: 6 TGGAGFIGSQLAKRLLKEGWKVFIF-------DNLSSGYFHN----IPKGAVFKWLDLRD 54
Query: 142 AEVGNVVGGVTFDVVL---DNNGKNLDAVRPVAD-------------WAKSSGVKQFLFI 185
+ ++ DVV + G+ L PV D W+ VKQF+F
Sbjct: 55 QDAFTLLPKEQIDVVFHLASHVGQELSFENPVFDLEVNAMTTMKLLKWSLEKKVKQFIFT 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA----GHVQVEKYISENFS----NWASFRPQYMIGSG 237
SS IY A E P +E V+P + G + E Y+ + + N S R + G G
Sbjct: 115 SSMNIYGNATEFPVIEDTKVQPPSPYAVGKIASE-YLCQIYQGLGVNTTSLRLFNVYGPG 173
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ + + +++K P+ + GS +F + V D+ V+ E A +
Sbjct: 174 QDLQNMKQGMVSIYLAYLLKKEPILVRGSQERFRDFVFVEDVVDAFYRCVD--ERAYGRV 231
Query: 293 FNLVSDRAVTLDGMAKLCA 311
+N+ + R + + K+ A
Sbjct: 232 YNVATGRKTYVKELLKMLA 250
>gi|418697041|ref|ZP_13258042.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri str.
H1]
gi|409955208|gb|EKO14148.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri str.
H1]
Length = 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEG-------DVVKPDAGHVQV-EKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E D K AG ++ +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKAGCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAF 336
T+ +A + + G V++V D ++ I + K F
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF 282
>gi|374308310|ref|YP_005054741.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
gi|291166638|gb|EFE28684.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
Length = 308
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ + G + +A+ + G+EV +M N + ++P G
Sbjct: 2 KKILV----TSGTVFVTRTIAEYYVKKGYEVYVM-----NRNTKEQP----------KGV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D +G + +FDVV+D+ + V + D K+++ ISS+ +Y
Sbjct: 43 ILIQADRHHIGRKLRPYSFDVVIDH-AYTAEEVDLLLDALGEH--KEYILISSSAVYPED 99
Query: 195 DEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V + ++ EK + + RP Y+ G NN E + F
Sbjct: 100 GIQPFTEECKVGENKFWGQYGINKIEAEKLLLNRNPSAYIVRPPYLYGPMNNVYRESFVF 159
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D V R +P +G V D+ + ++ + S++IFN+ + + ++
Sbjct: 160 DCAVSGRKFYLPNNGSMKLQFLFVEDMCKFFDILLQ--KKPSNHIFNVGNSKLISTKDWV 217
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+C + G +E V+ + + ++ + F F + +
Sbjct: 218 SMCYEIVGEKLEFVYVNQE---VEQRNYFSFYDYEY 250
>gi|456873239|gb|EMF88648.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira santarosai str. ST188]
Length = 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIVSAGG---KTVWG 139
+GG +G L LL G++VT++ + + +K+ P + + G +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLNEGYKVTVLDLMIYGEEVLKEHPNLTKIQGDIRDQGILNQTIPG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + ++ SGVK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPNLGKSINLDAFRPLVEISRRSGVKRFIYASSSSVYGVK 128
Query: 195 DEPPHVEGDVVKPDAGH----VQVEKYISENFSN---WASFRPQYMIGSGNNKDCE---E 244
+EP E ++P + EK +SE S+ + RP + G + +
Sbjct: 129 EEPNVTEDFSLEPLTDYSKFKADCEKILSEYQSSDFTTVTIRPATVCGYSPRQRLDVVVN 188
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTL 303
+ KR + + G G Q H+ D+ + + P E + I+N T+
Sbjct: 189 ILTNLAYHKREISVFG-GTQLRPNIHIGDMVDAYLVLLRAPKEKIAGEIYN-AGYLNFTV 246
Query: 304 DGMAKLCAQAAGLPVEIV 321
+A + + G V++V
Sbjct: 247 SEIANMVKEVVGEDVKLV 264
>gi|228912108|ref|ZP_04075826.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
gi|228847535|gb|EEM92471.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
Length = 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCTENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYVSNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGKDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|288961614|ref|YP_003451924.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
gi|288913894|dbj|BAI75380.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
Length = 314
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 111/294 (37%), Gaps = 68/294 (23%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG +LA LL GH VTI+ + +S ++ P G K V GD
Sbjct: 7 TGGCGFIGSHLADRLLADGHRVTILD--NLSSGSLQNKPH---------GAKLVVGDVAD 55
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD----------WAKSSGVKQF-------- 182
PA V + G + G+ +D V +A WA++
Sbjct: 56 PAAVREAMAG--------DAGEGVDGVFHLAAVASVQKSRELWAETHRTNLLGTVTVFEA 107
Query: 183 ------------LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WA-- 226
++ SSA IY P E + +P + + V+K E WA
Sbjct: 108 ARNAKGGHPVPVVYASSAAIYGDNTNTPLREDEPPRPLSAY-GVDKLGCEMHGRVAWAIQ 166
Query: 227 -----SFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
FR + G + F R+ R V I G G Q + V D+
Sbjct: 167 GVPTVGFRFFNVYGPRQDPMSPYSGVISIFARRVARGEDVEIHGDGQQVRDFVFVGDVVR 226
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+L LA+E A + +FNL + RA +L + ++ + G V H +P+A I
Sbjct: 227 ILALAMER-RFAGAQLFNLCTGRATSLVMLLEVLQELCGSKVRRRHTEPRAGDI 279
>gi|398860812|ref|ZP_10616456.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
gi|398234252|gb|EJN20135.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N +V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD--NPLV----ELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ LF S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHSLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVGVLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ N+ ++A TL M + G LP V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLEALEAVVGELPP--VSYGPARSG 275
>gi|325289029|ref|YP_004265210.1| sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
gi|324964430|gb|ADY55209.1| Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
Length = 329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 41/259 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-----W 138
+G IG L +ELL SG+ V + M+KP + N ++ GGK
Sbjct: 6 TGATGFIGARLVEELLDSGYRVRVF---------MRKPIEHYPN--MAWGGKVTAAVGDL 54
Query: 139 GDPAEVGNVVGGVTFDVVL--------------DNNGKNLDAVRPVADWAKSSGVKQFLF 184
D + V GV DVV+ D N + + + ++ +G+K FL+
Sbjct: 55 KDRDSIKKAVQGV--DVVVHLAAQLGSWRAKQEDFTEVNDNGTKFFVEESEMAGIKHFLY 112
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQV----EKYISENFSNW---ASFRPQYMIGSG 237
IS+AG++ + P E P + Q E+YIS+ RP ++ G G
Sbjct: 113 ISTAGVFGRLKQIPADETHPCSPRYPYEQTKFRAEQYISQKIREGFPATIIRPSHIYGPG 172
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ +++ P+ G G F ++ DL L L + + ++ L
Sbjct: 173 DLNMVP--LLKILLKFHLFPLIGGGKSFFQPLYIDDLLKGLILVIGHRNTVCGKLYVLAG 230
Query: 298 DRAVTLDGMAKLCAQAAGL 316
A T +L A+ G+
Sbjct: 231 KEATTFRQYIQLSAKLMGI 249
>gi|289772061|ref|ZP_06531439.1| reductase [Streptomyces lividans TK24]
gi|289702260|gb|EFD69689.1| reductase [Streptomyces lividans TK24]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 109/274 (39%), Gaps = 38/274 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + LG G EVT++ G + PP R G +T P +
Sbjct: 7 GGTEFVGRSVVEAALGRGWEVTVLHRG-----RHAPPPGARALH----GDRTA---PDGL 54
Query: 145 GNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP------ADEP 197
+ G T+D V+D AVR A + +++++SS +Y A++
Sbjct: 55 TALTGAEDTWDAVVDTWSAAPRAVRDAARLLRQR-AGRYVYVSSCSVYAWAPPAGYAEDA 113
Query: 198 PHVEGDVVKPDAGHVQ-------VEKYISENFSNWAS--FRPQYMIGSGNNKDCEEWFFD 248
P VEG DAG E + + F S R ++G N W+ +
Sbjct: 114 PLVEG--ASADAGQRDYARDKRGAELAVLDAFGADRSVLVRAGLILGPYENVGRLPWWLN 171
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMA 307
R+ R PV PG VRDL+ + AVE S +NLVS T+ G+
Sbjct: 172 RLARGGPVLAPGPRDLPLQYIDVRDLADWVLGAVER---ELSGPYNLVSPPGHTTMGGLL 228
Query: 308 KLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 338
+ CA G E+ P+ AAGI+ P
Sbjct: 229 EACATVTGGTAELRWTSPETVLAAGIEPWVQLPV 262
>gi|282936064|gb|ADB04289.1| putative sugar dehydratase [bacterium enrichment culture clone N47]
gi|308272789|emb|CBX29393.1| hypothetical protein N47_J03740 [uncultured Desulfobacterium sp.]
Length = 323
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 132 AGGKTVWGDPAEVGNVVGGV---TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
AG + + G+ +V GV + V+D G+ + + + ++ + +++IS+
Sbjct: 56 AGVREIVGNRHYEAQIVDGVPALDWHAVVDFCGEADEDIVKILEYLPGR-IFHYIYISTT 114
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW-----------------ASFRPQ 231
IY+ P V D K A ++ Y F+ W RP
Sbjct: 115 SIYQNTRILP-VSEDAPKLSAPQPELGDYADYAFNKWLCELRLQIDCPKRGIAYTCLRPA 173
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G N E +FFD I +PV IP + + N +V DLS ++ + N A
Sbjct: 174 IIYGPYNYAPRETYFFDLIYHSKPVIIPRNDLPLFNFVYVVDLSKVIQKCLGN-HAVFDQ 232
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
FN+ S++ ++ + ++ + + I
Sbjct: 233 AFNVCSEQLISYQRLMEVFEEVCSKKISI 261
>gi|426411737|ref|YP_007031836.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
gi|426269954|gb|AFY22031.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHALEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E P A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPGAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|408677853|ref|YP_006877680.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
gi|328882182|emb|CCA55421.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
Length = 288
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 173 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ---------VEKYISENFS 223
W SG + ++ SS+ Y A + P +V+ D G+ Q + K E
Sbjct: 85 WLARSGTPRAVYFSSSAAYPVALQQPGPIRRLVETDIGYQQPGRPDATYGLAKLTGEQLC 144
Query: 224 NWASFRPQYMI------GSGNNKDCEEWF--FDRIVRKR--PVPIPGSGMQFTNIAHVRD 273
+A M G G ++D F F R R+R P I G G + HV D
Sbjct: 145 QYAEAEGTRMTILRPFSGYGGDQDEAYPFPAFIRRARERQDPFEIWGDGTSTRDWIHVDD 204
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+ AVE + NL + RA T D +AK+ AAG E+ H G+ +
Sbjct: 205 IVDATLAAVEE---GVTGPVNLGTGRATTFDQLAKMVTAAAGYRPELKHLPAAPQGVHHR 261
Query: 334 KAFPFRNMVF 343
P R + F
Sbjct: 262 VCDPSRMLDF 271
>gi|302389089|ref|YP_003824910.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
gi|302199717|gb|ADL07287.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + ++L G+ I+T + D + RF E + + V+ A+
Sbjct: 10 AGHKGLVGSAILRKLQAEGYS-NIVTRTHQELDLTNQQEVYRFFE--TERPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PH 199
VG ++ T+ V +NL + D A GVK+ LF+ S+ IY K A +P H
Sbjct: 67 VGGILANSTYPAVFIR--ENLLIQTNIIDAAYRYGVKKLLFLGSSCIYPKFAPQPIKEEH 124
Query: 200 VEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
+ ++P G + Y + +N+ S P + G G+N D E
Sbjct: 125 LLTGALEPTNEPYAIAKIVGIKMCQAYNKQYGTNFISVMPTNLYGPGDNFDLETSHVLPA 184
Query: 244 --EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + V P V + GSG HV DL+ + N + SS I N+ +
Sbjct: 185 LIRKFHEAKVAGAPHVVVWGSGTPRREFLHVDDLADACLFLMNNYD--SSEIINIGVGKD 242
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAKKAF 336
+T+ +A L + G EIV K G +D K F
Sbjct: 243 LTIAELANLIKEIVGYKGEIVFDTSKPDGTPRKLLDVSKLF 283
>gi|336428610|ref|ZP_08608589.1| hypothetical protein HMPREF0994_04595 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336004990|gb|EGN35042.1| hypothetical protein HMPREF0994_04595 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 350
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 35/269 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP----FNRFNEIVS 131
KVL + GG I ++++LL GHE+ ++ G+ N+ + P +NR EI+
Sbjct: 2 KVLFI----GGTGTISMAISRKLLEQGHELYLINRGNRNAGLAVQLPGTGEWNRPKEILV 57
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGI 190
K E ++ G+ FD V D + + D+ G +QF++ISSA
Sbjct: 58 DINKE-----EEAAKLLEGMQFDAVADFIAFRKEQLE--RDYRLFGGRTRQFIYISSASA 110
Query: 191 Y-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS--- 236
Y KPA + P+ + K + ++ Y E F RP +
Sbjct: 111 YQKPATDYLITESTPLCNPYWQYSRDKTEGEDYLMKLYREEGFPI-TIVRPSHTFDERSV 169
Query: 237 --GNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G + W R++ +PV I G G + H D + + NP A +
Sbjct: 170 PLGVHGANGSWQVLKRMLEGKPVIIHGDGTSLWTMTHNSDFAPGFIGLLGNPHALGQAV- 228
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+++S ++T + + ++ A A G+ + VH
Sbjct: 229 HIMSPESMTWNQIYEVVANALGVKLNAVH 257
>gi|45658048|ref|YP_002134.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|417764673|ref|ZP_12412640.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417771687|ref|ZP_12419581.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417782757|ref|ZP_12430481.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. C10069]
gi|418668897|ref|ZP_13230297.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418682903|ref|ZP_13244116.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418707979|ref|ZP_13268792.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418722866|ref|ZP_13281840.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12621]
gi|418728700|ref|ZP_13287271.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12758]
gi|421086354|ref|ZP_15547205.1| NADH(P)-binding protein, PF13460 family [Leptospira santarosai str.
HAI1594]
gi|421101900|ref|ZP_15562511.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421116398|ref|ZP_15576784.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421127783|ref|ZP_15588004.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421134247|ref|ZP_15594388.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|45601289|gb|AAS70771.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|289450916|gb|ADC93833.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Canicola]
gi|289451009|gb|ADC93925.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Autumnalis]
gi|289451093|gb|ADC94008.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar
Grippotyphosa]
gi|400325462|gb|EJO77738.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353117|gb|EJP05293.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409946474|gb|EKN96484.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409954172|gb|EKO08667.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. C10069]
gi|409963700|gb|EKO27423.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12621]
gi|410012098|gb|EKO70203.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410021546|gb|EKO88330.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410368573|gb|EKP23950.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410431919|gb|EKP76279.1| NADH(P)-binding protein, PF13460 family [Leptospira santarosai str.
HAI1594]
gi|410434842|gb|EKP83977.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410755629|gb|EKR17259.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410771469|gb|EKR46670.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776552|gb|EKR56529.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12758]
gi|455670178|gb|EMF35207.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|456822404|gb|EMF70890.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456972627|gb|EMG12978.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 330
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAF 336
T+ +A + + G V++V D ++ I + K F
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF 282
>gi|342218639|ref|ZP_08711249.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
gi|341589509|gb|EGS32784.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ L+ +GH++T+ V + ++ ++ P E V D A+
Sbjct: 6 TGGAGFIGSHIGDALIMAGHQITV--VDNLSTGSLQNVP----KEAVFYEADI--RDIAQ 57
Query: 144 VGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+ + FDVV L++ N+ + V D ++ +K+F+F SS
Sbjct: 58 METIFAQGKFDVVFHEAAQTMVPYSLEHPLEDADLNIIGLIKVLDLCRTYHIKKFIFSSS 117
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--FRPQYMI----------- 234
A +Y + P E + V+P + + + K +E + +R Y+I
Sbjct: 118 AAVYGDNQQLPLQETEPVEPTSFY-GLTKATAEAYIQMYHRLYRLPYVILRYANVYGERQ 176
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GS F +R+V ++ + I G G Q + +V+D++ A+E+ A S I+N
Sbjct: 177 GSNGEGGVVYIFANRLVHQQALTIFGDGTQTRDFIYVKDVAQANVAALES--AIRSGIYN 234
Query: 295 LVSDRAVTLD 304
+ + + T++
Sbjct: 235 VSTAKETTIE 244
>gi|455789103|gb|EMF41039.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 330
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAF 336
T+ +A + + G V++V D ++ I + K F
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF 282
>gi|448449544|ref|ZP_21591769.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
gi|445813173|gb|EMA63154.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
Length = 330
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A AG+ E+V
Sbjct: 231 TLRETLETIADVAGIDCELV 250
>gi|24214283|ref|NP_711764.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|386073735|ref|YP_005988052.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|417759523|ref|ZP_12407560.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000624]
gi|417777162|ref|ZP_12424987.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000621]
gi|418670781|ref|ZP_13232143.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000623]
gi|24195200|gb|AAN48782.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|353457524|gb|AER02069.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|409944998|gb|EKN90578.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000624]
gi|410573039|gb|EKQ36096.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000621]
gi|410582210|gb|EKQ50009.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000623]
Length = 330
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAF 336
T+ +A + + G V++V D ++ I + K F
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF 282
>gi|430749917|ref|YP_007212825.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
gi|430733882|gb|AGA57827.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
Length = 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +I +++ ++ GHE+ + G R + V G K + GD
Sbjct: 7 GGTGLISQAVSRLVISQGHELYLFNRG-------------RRQDFVPEGEKVIEGDIRDA 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY-KP-----A 194
A + G +DVV+D + R AD G KQ++FISSA Y KP
Sbjct: 54 ASAAEALRGHEWDVVVDWIVFTPEQAR--ADIELFRGRTKQYVFISSASAYQKPLRHYII 111
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQY-----MIGSGNNKDCEE 244
E +E + + EK + + + F RP Y MI + N +
Sbjct: 112 TESTPLENPYWQYSRDKIACEKLLMDEHKA-SGFLVTIVRPSYTYGDTMIPAAINSWEKP 170
Query: 245 W-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W DR+ R +PV + G G + H D + + PEA +++ SD +T
Sbjct: 171 WSIVDRMRRGKPVIVHGDGTSLWTMTHNTDFAVGFAGLLGRPEAI-GEAYHITSDEVLTW 229
Query: 304 DGMAKLCAQAAGLPVEIVH 322
+ + + +AAG+ ++VH
Sbjct: 230 NQIYEAIGRAAGIEPKLVH 248
>gi|407366592|ref|ZP_11113124.1| NAD-dependent epimerase/dehydratase [Pseudomonas mandelii JR-1]
Length = 310
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVS--AGGKTVWG 139
+GG IG +L + LLG G++V ++ + ++ K+ P + N ++ A G V
Sbjct: 9 TGGAGFIGSHLVEALLGKGYKVRVLD--NLSTGKVSNLPMDNANLNLVIGDVADGAVVAQ 66
Query: 140 DPAEVGNVVG-------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ G VV + D + + N V + +G+K+ +F SSA IY
Sbjct: 67 AMRDCGAVVHLAAVASVQASVDDPVSTHQSNFVGTLNVCESMVKAGIKRVVFASSAAIYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY----MIGS-----GNNKD-- 241
E + D K +K SE + ++ +R ++ MI G +D
Sbjct: 127 NNGEGTAIHEDTPKSPLTPYASDKLASEQYLDF--YRREHGLEPMIFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F + ++ V I G G Q + +V+DL S+L ++E E + + N+
Sbjct: 185 SPYSGVISIFTKLALAEQSVAIFGDGSQTRDFVYVQDLVSILVQSLEVSEPSPGAV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
R+ +L+ + G P++++H+ P+ I +A
Sbjct: 244 LSRSTSLNDLIAELGTVTGSPLKVIHHAPRQGDIRHSRA 282
>gi|398891080|ref|ZP_10644520.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
gi|398187315|gb|EJM74659.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHGVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHMAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKSPLTPYAADKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|398916484|ref|ZP_10657769.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM49]
gi|398174748|gb|EJM62533.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM49]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPRVELIVGDVADAAVVTQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLAGEHYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEDGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|418975584|ref|ZP_13523488.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
gi|383347567|gb|EID25545.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-------------TIMTVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKMGQSLETFTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|398999037|ref|ZP_10701790.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
gi|398132656|gb|EJM21918.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
Length = 309
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N +V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPMD--NPLV----ELIEGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ L+ S
Sbjct: 61 AALVAQAMLGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQAGVKRVLYAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K V+K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYAVDKLASEHYFDF--YRRQHGLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ N+ ++A TL M + G LP V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|119493460|ref|ZP_01624129.1| oxidoreductase [Lyngbya sp. PCC 8106]
gi|119452704|gb|EAW33883.1| oxidoreductase [Lyngbya sp. PCC 8106]
Length = 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-----NW 225
K K+F+ +S+ G++ ++PP E +KP V+ E +I +F+ ++
Sbjct: 113 KEPNFKRFVHVSTIGVHGHIEQPPADETYRMKPGDIYQETKVEAELWI-RDFAPKAGLSF 171
Query: 226 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
A RP + G G+ + + + ++V K+ VP+ G G + HV DL++ + A +P
Sbjct: 172 AVVRPAGIYGPGDKRLLKIF---QMVNKKWVPVIGDGSNLYHFIHVDDLTNFMICAATHP 228
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+ A + +F S A+T + M + G+ + +
Sbjct: 229 K-AEAEVFICGSPEAMTFEKMISIIGDVYGVKAQFL 263
>gi|398901758|ref|ZP_10650549.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
gi|398179369|gb|EJM66981.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
Length = 309
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N ++ + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD--NPLI----ELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ L+ S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLYAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHSLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ N+ ++A TL M A L A LP V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLAALEAVVGKLPP--VSYGPARSG 275
>gi|258645455|ref|ZP_05732924.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
gi|260402806|gb|EEW96353.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
Length = 306
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 54/287 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI--------------------MTVGDENS 115
K+LI +GG IG +L+ LL +GHE+TI M + DE
Sbjct: 2 KILI----TGGAGFIGSHLSDALLAAGHEITIIDDLSSGTKDFLPKEAEFLKMDIRDEKL 57
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
+ K F+ I +T+ PA + N LD + N+ + V + A+
Sbjct: 58 TDIFKE--RHFDIIYHEAAQTMV--PASIDN--------PYLDAD-INISGMLRVLEAAR 104
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---------SNWA 226
+ V++ +F SSA +Y P E + P + + + K+++E + ++
Sbjct: 105 KTDVQKIIFSSSAAVYGDNPALPLTENLIPAPSSFY-GLTKWMTEKYLALYHKIYELSYT 163
Query: 227 SFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
R + G D E F + +P+ I G G Q + V D+ S A+
Sbjct: 164 VLRYSNVYGPRQGADGEGGVIYIFAKSLAENKPITIFGDGRQTRDFISVHDVISANLAAL 223
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A I N+ ++ ++L+ +A AAG +++ Y P G
Sbjct: 224 HQ---ADGEIINVSTETELSLNDLASKMIAAAGCSEDLLRYGPPRTG 267
>gi|222481362|ref|YP_002567598.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222454738|gb|ACM59001.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 315
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQV 214
N+ A + D A +G + +F SSA +Y P E D P AG V
Sbjct: 106 NVSATADLLDLATDAGAR-VVFASSAAVYGDPSSVPIGETDAKDPREPYGVSKLAGDHLV 164
Query: 215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
Y + + R + G G F +++ R P+ + G G Q + HV D+
Sbjct: 165 RGYADWKDLDTVALRLFNVYGPGQTGGVVPSFLEQVQRGEPLVVHGDGTQTRDFVHVDDV 224
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 334
+ A A+ FN+ + ++ +A + AA + V++VH DP+ A + +
Sbjct: 225 VRAMVAAARTD--ATGESFNVGTGDVTSIHELATVVRDAAPVTVDVVHDDPRPADVPESQ 282
Query: 335 A 335
A
Sbjct: 283 A 283
>gi|398996360|ref|ZP_10699218.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM21]
gi|398127082|gb|EJM16499.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM21]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDP 141
+GG IG +L LL GH V I+ D ++ K P + N IV T
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPNLELIVGDVADTALVAQ 66
Query: 142 AEVG-------NVVGGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A VG V V VV + + N V + + +GVK+ LF SSA +Y
Sbjct: 67 AMVGCSAVAHLAAVASVQASVVDPVKTHQSNFIGSLNVCEAMRQAGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ + K V+K SE++ + +R Q+ + G +D
Sbjct: 127 NNGEGESIDEETPKSPLTPYAVDKLASEHYFEF--YRRQHGLEPVIFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +L A+E P + + N+
Sbjct: 185 SPYSGVISIFSERARQGLPITVFGDGEQTRDFVYVEDLIELLVQAIEKPHVEAGAV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
++A +L M + G LP + Y P +G
Sbjct: 244 WNQATSLKQMLQALEAVLGELPP--ISYGPARSG 275
>gi|229103665|ref|ZP_04234346.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
gi|228679787|gb|EEL33983.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
Length = 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 51/291 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG--DENSDKMKKPPFNRFNEIVSAG 133
K+LI+ GG +G +E L GHEVT+ G E ++KK +R N++ S
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRGSNKELFPEVKKLIGDRNNDVSSLE 57
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ +DVV+D G + +R V + VKQ++FISS +YK
Sbjct: 58 NRK----------------WDVVIDTCGFSPHHIRNVGE-VLQDNVKQYIFISSLSVYKD 100
Query: 194 ADEPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RP 230
P H++ D +++P+ +++ + S + + R
Sbjct: 101 WI-PHHIKEDYILQPEPTSDRIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G+ + D ++ R+ + V +PG + + ++D++S EN +A +
Sbjct: 160 GLLSGTFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
NI + +T++ + C + E V D + + KA P+ M
Sbjct: 220 NITG--PNDELTMEELLNTCKRVTNSDAEFVWVD--ESFMKEHKAQPWTEM 266
>gi|335436236|ref|ZP_08559036.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
gi|334897918|gb|EGM36042.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
Length = 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 30/272 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +E L ++V I G+ + PF+ + + G D A +
Sbjct: 8 GGTRFIGRHTVEEFLDHDYDVAIFNRGNHEN------PFDATDRVEHVQGDRT--DDAAL 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D + V ++++SS Y + P
Sbjct: 60 EAARDAVDPDVVIDCVAYHPRDVRAATD--IFADVDAYVYVSSGASYGKEEVPKRESETP 117
Query: 205 VKP---DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++P D + Y +E+ N + RP + G + + +++
Sbjct: 118 LEPWPGDDSDESAQTYGKRKAEGDRAVFAAAEDGVNAMAVRPTVVYGPHDYTERFDYWLA 177
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI + +PG G+ A+V D++S L + E EA + +N+ A TL +
Sbjct: 178 RIDTYDRIVVPGDGLSLWQFAYVEDVASALRIVAERGEAGEA--YNVGDRHAPTLGQWVE 235
Query: 309 LCAQAAGLPVEIV--HYDPKAAGIDAKKAFPF 338
L A A PV V + AA + A + FP
Sbjct: 236 LIADAMDRPVHAVGASANELAAAVLAPEDFPL 267
>gi|421100131|ref|ZP_15560769.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. 200901122]
gi|410796834|gb|EKR98955.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. 200901122]
Length = 330
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 31/278 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIV---SAGGKTVWG 139
+GG +G L LL G++VT++ + D +K+ P + + +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIKGDIRDQDVLNRTILG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + +K +GVK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPDLGKSINLDAFRPLVEISKKNGVKRFIYASSSSVYGVK 128
Query: 195 DEPPHVEGDVVKP---------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-- 243
+E E +++P D + E Y +++F+ + RP + G + +
Sbjct: 129 EESNVTEDFLLEPLTDYSKFKADCEKILAE-YQTDDFTT-VTIRPATVCGYSPRQRLDVV 186
Query: 244 -EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAV 301
+ KR + + G G Q H+ D+ + + P E + I+N
Sbjct: 187 VNILTNLAYHKREISVFG-GTQLRPNIHIDDMVDAYLILLRAPKEKVAGEIYN-AGYLNF 244
Query: 302 TLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAF 336
T+ +A + + G V++V D ++ I + K F
Sbjct: 245 TVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF 282
>gi|405378690|ref|ZP_11032605.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
gi|397324790|gb|EJJ29140.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
Length = 321
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 21/249 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+V+++ GH +G YL L+ +GHEV ++ G S KP + +
Sbjct: 3 RVIVIGAT--GH--VGTYLVPRLVEAGHEVVAISRG---SAAPYKPHEAWSRADIRHMDR 55
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY---- 191
G+ + + ++V+D ++ +A A V+ FL + +
Sbjct: 56 AALEAEGRFGDAIRALKGEIVIDMICFTTESNEQLAT-ALEGHVRHFLHTGTIWTHGFST 114
Query: 192 ---KPADEPPHVEGDV-VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN-----KDC 242
P + P GD VK A + + E P +++G G N
Sbjct: 115 VVPTPEEAPKKPFGDYGVKKAAIEADLLRMAREKNFPVTLIHPGHIVGPGWNPLNPAGHF 174
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F + R + +P GM+ + H D++ + A+ PEAA F+ VS++AVT
Sbjct: 175 NPEVFTSLARGETLALPNFGMETVHHVHADDIAELFMAAIAKPEAAIGQAFHAVSEKAVT 234
Query: 303 LDGMAKLCA 311
L G A+ A
Sbjct: 235 LRGYAEAMA 243
>gi|297197709|ref|ZP_06915106.1| NAD-dependent epimerase/dehydratase [Streptomyces sviceus ATCC
29083]
gi|197717415|gb|EDY61449.1| NAD-dependent epimerase/dehydratase [Streptomyces sviceus ATCC
29083]
Length = 323
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + + P ++ ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGSRTA-YAEAPEWHHVRQVVA--DREQEDREGTF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-------- 196
G+ V + D V+D LD+ + + + + S + PAD+
Sbjct: 64 GDRVARLEPDAVIDLVCFTLDSATALVERLRGE-AGHLVHCGSVWRHGPADKLPISEATG 122
Query: 197 -PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDCEEWFFD 248
PP E + K + E+ S S P +++G G + D W+
Sbjct: 123 TPPVGEYGIQKDRIARMLKEETASGGLVT-TSLHPGHIVGPGWHPIGPLGSLDPAVWYT- 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + + +PGSG++ + H D++ AVE+ +AA+ F +V+ A+ + G A+
Sbjct: 181 -LSAGQSLKVPGSGVELMHHVHADDVAQAFERAVEHRDAAAGEDFTIVAPTALNVRGYAR 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|398948084|ref|ZP_10672564.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
gi|398161092|gb|EJM49335.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHGVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKHRAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|99081322|ref|YP_613476.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
gi|99037602|gb|ABF64214.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
Length = 319
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 47/269 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF------NRFNEIVSAGGKTV 137
+G ++G + + L + + ++T G E+ D ++ R + I+ A +
Sbjct: 17 AGHRGMVGGAVLRRL--AEEDCEVVTAGREDLDLTRQQAVMEWMAATRPDAIIMAAAR-- 72
Query: 138 WGDPAEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA 194
VGG+ D +D +NL +A+ A ++ V++FLF+ S+ IY K A
Sbjct: 73 ----------VGGIKANSDYPVDFLLQNLQIETNLAEAAHAADVQRFLFLGSSCIYPKFA 122
Query: 195 DEP------------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+P P E V AG ++ Y + +W S P + G G+N D
Sbjct: 123 PQPIPEASLLTGALEPSNEWYAVAKIAGIKLMQAYRQQYGRDWISAMPTNLYGPGDNYDL 182
Query: 243 E----------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
E ++ R+ V + GSG H DL+ L +++ A
Sbjct: 183 ETSHVLPALLHKFHTARLTGADQVTLWGSGTPLREFLHCDDLADALVFLLKHYSGADH-- 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
N+ S + +++ +A+L A+ G+ E+V
Sbjct: 241 VNVGSGKEISIRALAELIAEIVGVSPELV 269
>gi|403716140|ref|ZP_10941750.1| NAD-dependent epimerase/dehydratase family protein [Kineosphaera
limosa NBRC 100340]
gi|403210056|dbj|GAB96433.1| NAD-dependent epimerase/dehydratase family protein [Kineosphaera
limosa NBRC 100340]
Length = 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 60/274 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG------------------DENSDK 117
K+L+ +G +G LA L+ GHEV + G D++
Sbjct: 2 KILV----TGTEGYLGCLLAPLLIADGHEVVAVDTGFYKNGWLYNGLESTPFTLDKDMRD 57
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ F + +V+ + DP VG++VG +TFD+ N VA+ AK +
Sbjct: 58 LTVEDFEGVDAVVAMAELS--NDP--VGDLVGPITFDI-------NHKGSVHVAETAKKA 106
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV-----VKPDAGHVQVEKYISENFSNW----ASF 228
GVK+F+++SS +Y A EGDV V P + + KY++E W +F
Sbjct: 107 GVKRFVYMSSCSVYGVA------EGDVDETSPVNPQTAYGEC-KYLTEQ-DLWKMADENF 158
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
P M + FD ++ ++ + + G + + H D+ + +
Sbjct: 159 HPTAMRNATAFGASPRQRFDIVLNNLSGLAWVEKKIAMTSDGTPWRPMVHALDICKSIRM 218
Query: 281 AVENP-EAASSNIFNLVS-DRAVTLDGMAKLCAQ 312
+E P E S FN+ S D T+ +A+ AQ
Sbjct: 219 VLEAPVEKVSGEAFNVGSYDNNYTVRQIAETVAQ 252
>gi|254168150|ref|ZP_04874997.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
gi|197622916|gb|EDY35484.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
Length = 285
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--VQVEKYISENFS---- 223
+ ++A+ V+QF++ISSA +Y EP ++ D P + K E +S
Sbjct: 85 LLEYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYS 141
Query: 224 -----NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
AS RP + + + F R + P+ I G G Q + +V+D
Sbjct: 142 ELYGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQD 201
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+ ++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH P+ D +
Sbjct: 202 VVHLVKLALTK---NADGVYNCGTGKETSINELAKIIAELSGKDIKIVHDKPREG--DIR 256
Query: 334 KAFPF 338
K++ +
Sbjct: 257 KSYAY 261
>gi|398874798|ref|ZP_10629998.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
gi|398194021|gb|EJM81106.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
Length = 309
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPRVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E P A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPLAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|270291986|ref|ZP_06198201.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
gi|270279514|gb|EFA25356.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
Length = 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKVGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKVGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|153007033|ref|YP_001381358.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
gi|152030606|gb|ABS28374.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
Length = 373
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 115/321 (35%), Gaps = 52/321 (16%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKK----VLIVNTNSGGHAVIGFYLAKELLGSGHEVTI 107
AC SR SS + + SA EK + V+ +G IG ++A+ LL GHEV+
Sbjct: 13 ACATLSRGSSGDP-SSRGSAREKARYAPAVMAPIVLTGCAGFIGSHVARRLLRDGHEVS- 70
Query: 108 MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNG------ 161
G +N + P R + A + A+V + D VLD
Sbjct: 71 ---GLDNLNDYYDPSLKRARLALLAPERGFRFTAADVADRE---ALDAVLDEAEPEYVVH 124
Query: 162 -------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
NLD V D GV+ ++ SS+ +Y ++ P E
Sbjct: 125 LAAQVGVRNSVRNPRAYAETNLDGFFNVLDGCARRGVRHLVYASSSSVYGSNEKVPFSEE 184
Query: 203 DVVK---------PDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVR 252
D V A + Y N R + G D F R I+R
Sbjct: 185 DPVDHPISFYAATKKANEIMAHAYSHLNRLPTTGLRFFTVYGPWGRPDMAPILFGRAILR 244
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP----EAASSNIFNLVSDRAVTLDGMAK 308
P+ + G + +V D+ ++T V P +AA + N+ +DR V L+
Sbjct: 245 GEPITLFNHGRMLRDFTYVDDVVEVVTALVPRPPEPEDAAPYRVLNVGNDRPVALEEFVA 304
Query: 309 LCAQAAGLPVEIVHYDPKAAG 329
+ + G P + Y P G
Sbjct: 305 ILERHLGRPA-LRKYAPMQPG 324
>gi|148272012|ref|YP_001221573.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829942|emb|CAN00867.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 347
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 23/250 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + + +G +VT++ G + K + P + DP+ +
Sbjct: 14 GGTGTISAACVRASVAAGMDVTVVNRGADA--KGRGAPEGVTTRVADVT------DPSAL 65
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY-KPADEPPHVEG 202
+G TFD V+D + DA +G +QF+ ISSA IY KPA + P E
Sbjct: 66 LAAIGDRTFDAVVDF--LSFDAAGADGRVELFAGRARQFVAISSASIYRKPALQTPITES 123
Query: 203 DV-VKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSGNNKDCEEW-FFDRIVR 252
+ P + + + + + F + RP + + +W DRI R
Sbjct: 124 TLRANPFLSYARDKIAMEDAFLRHHAASGFPVVIVRPSHTYDEASPPLAGDWTVVDRIAR 183
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
V +PG G + H D + L + + E A ++ SD T D + L A
Sbjct: 184 GDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERAVGEALHITSDDVSTWDRIHHLVAD 242
Query: 313 AAGLPVEIVH 322
A G+ +VH
Sbjct: 243 ALGVEARLVH 252
>gi|410939482|ref|ZP_11371309.1| NADH(P)-binding protein, PF13460 family [Leptospira noguchii str.
2006001870]
gi|410785350|gb|EKR74314.1| NADH(P)-binding protein, PF13460 family [Leptospira noguchii str.
2006001870]
Length = 330
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 26/259 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIV---SAGGKTVWG 139
+GG +G L LL G++VT++ + D +K+ P + + +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGKDVLKEHPNLTKIQGDIRDQDVLNQTIPG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + +K VK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSVYGIK 128
Query: 195 DEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDCE--- 243
DEP E ++P + + + +Y++++F+ + RP + G + +
Sbjct: 129 DEPNVTEDFSLEPLTDYSKFKADCEKILNEYLTDDFT-PVTIRPATVCGYSPRQRLDVVV 187
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVT 302
+ KR + + G NI H+ D+ + + P E + I+N T
Sbjct: 188 NILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIYN-AGYLNFT 245
Query: 303 LDGMAKLCAQAAGLPVEIV 321
+ +A + + G V++V
Sbjct: 246 VSEIANMVKEVVGEDVKLV 264
>gi|401683872|ref|ZP_10815757.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
gi|400186912|gb|EJO21117.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
Length = 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKMGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|302342054|ref|YP_003806583.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
gi|301638667|gb|ADK83989.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
Length = 327
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 35/268 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L+ +GG G L + LLG GH+V + +N + +K V G
Sbjct: 2 KILV----TGGTGFTGAALVERLLGLGHQVVAL----DNKEGLKPQALRDMGAEVVIGSV 53
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLD------------AVRPVADWAKSSGVKQFL 183
T D V + GV L + +D R VA A+ GV++F+
Sbjct: 54 T---DEPLVRRCMRGVEVVHHLAAAFREMDVPRNYYDQVNEGGARLVAQAAQDEGVRKFI 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIG 235
+ S+ G++ + PP E + A + Q KY E RP + G
Sbjct: 111 YCSTCGVHGNVERPPADENAPINA-ADYYQQTKYNGEVALRPFIDAGMKATILRPAAIYG 169
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+ + W V+K P+ GSG + ++ +L LA E + + +
Sbjct: 170 PGDPERF--WMIYSRVQKGVFPMFGSGKTLYHPLYIDNLIDAFLLAQEE-DKGLGQAYLI 226
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
++ ++ + A+A G PV I H+
Sbjct: 227 ADEQYYPIEELVTRVAKAMGKPVRIPHF 254
>gi|387792685|ref|YP_006257750.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
gi|379655518|gb|AFD08574.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
Length = 316
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG L K+LL G +V I V D S K+K+ F I K D
Sbjct: 7 TGGAGFIGSNLIKKLLTEG-KVNITCVDNFDDFYSRKVKEHNIASF--INHPNFKLFEFD 63
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
A+ N+ +T FD ++ GK N+DA + + ++AK+ G+KQF
Sbjct: 64 LADYKNINHFLTKKFDTIIHLAGKAGVRPSIEQPQAYQRANVDATQNLLEFAKNQGIKQF 123
Query: 183 LFISSAGIYK-------PADEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
+F SS+ +Y DEP P+ + GHV Y + + R
Sbjct: 124 IFASSSSVYGINPNTPWKEDEPLMPISPYASTKLSCEQLGHVYSHLYDIR----FLALRF 179
Query: 231 QYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ G D FF I+ + +P+ G G + ++ D+ + +A + + ++
Sbjct: 180 FTVYGPAQRPDLAIHKFFKSILNEAAIPVFGDGNTSRDYTYIDDILQGI-IACIDYDKSN 238
Query: 290 SNIFNLVSDRAVTL----DGMAKLCAQAA 314
I NL + VTL + + K C + A
Sbjct: 239 YEIINLGNSDTVTLSHLIESIEKTCNKKA 267
>gi|390450716|ref|ZP_10236302.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
gi|389661871|gb|EIM73462.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
Length = 316
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 35/264 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G H ++G + + L G E I+T + D ++ +F + A + A+
Sbjct: 13 AGHHGMVGSAMVRRLTAEGCE--IVTSNRYHVDLKRQVDVEKF--VRQAAPDVIVMAAAK 68
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG ++ T+ D + DN L + + A GV++FLF+ S+ IY K AD+P
Sbjct: 69 VGGILANDTYPADFLYDN----LMIEANIIEAAHQVGVEKFLFLGSSCIYPKFADQPIRE 124
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFF 247
P E + AG + Y + ++ S P + G G+N D +
Sbjct: 125 SALLTGELEPTNEWYAIAKIAGIKLAQSYRKQYGHDYISAMPTNLYGPGDNFDLDSSHVM 184
Query: 248 DRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++RK R + I G+G HV D + L ++N N+ S
Sbjct: 185 PALIRKAHEAKLREDREIVIWGTGKPCREFLHVDDCADALVFLLKNYSGYEH--VNVGSG 242
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVH 322
+++ + KL + G +IVH
Sbjct: 243 EDISILDLTKLVCEVVGFEGKIVH 266
>gi|284034275|ref|YP_003384206.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
gi|283813568|gb|ADB35407.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 47/252 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAE 143
GG IG YL L+ +GHEVT+++ G+ + P+ E + V D PAE
Sbjct: 7 GGTGHIGTYLVPGLVRAGHEVTVLSRGE-------RTPYRASGEWQQV--EMVAADRPAE 57
Query: 144 -----VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
G V + DVV+D D+ R +A+ A V+ L + ++ P+ P
Sbjct: 58 DAAGTFGPRVAELRPDVVIDLICFTEDSARQLAE-ALHGKVQHLLHCGTIWVHGPSASVP 116
Query: 199 HVEGDVVKP--DAGHVQ---VEKYISENFSN-----------------WASFRPQYMIGS 236
E +P D G VQ +E Y+ + WA P +
Sbjct: 117 TREDAPRRPFGDYG-VQKAAIETYLLDRARRDGLPVTLIHPGHISGPGWAPVNPAGHLDL 175
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
G F+++ R + +P G++ H D++ + A+ N A F+ V
Sbjct: 176 G--------VFEKLARGDELALPNLGLETVQHVHAADVAGVFLAALANRSVAVGESFHAV 227
Query: 297 SDRAVTLDGMAK 308
+D A+TL G A+
Sbjct: 228 ADGALTLRGYAE 239
>gi|448423482|ref|ZP_21582011.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|445683319|gb|ELZ35718.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
Length = 330
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRVVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A AG+ E+V
Sbjct: 231 TLRETLETIADVAGVDCELV 250
>gi|222480302|ref|YP_002566539.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222453204|gb|ACM57469.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 298
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNRFNEIVSA 132
KVL+ +GG IG YL + L GHEVT ++ ++ + ++ I SA
Sbjct: 2 KVLV----AGGTGFIGSYLCRALADGGHEVTALSRSPSDTPEGVASATGDVTDYDSIASA 57
Query: 133 GGKTVWGDPAEVGNVV---------GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
V G A V V G V D + +NL VR A+ G ++FL
Sbjct: 58 ----VEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTENL--VR----AAEEGGAERFL 107
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN----- 238
+S+ G AD +GD A Q E+ + E+ W FRP + G G
Sbjct: 108 QLSALG----ADP----DGDTAYIRA-KGQAEEIVRESGLGWTIFRPSVVFGEGGEFVSF 158
Query: 239 NKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
K + F + P+ P+PG G HV DL SML A+E E + +
Sbjct: 159 TKRLKGMFAPGL----PLYPLPGGGKTRFQPIHVEDLVSMLVAALEEDEHVGET-YEIGG 213
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIV 321
+TL + L +A V I+
Sbjct: 214 PETLTLRQVTDLVYEAEKKGVTII 237
>gi|407461654|ref|YP_006772971.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045276|gb|AFS80029.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 40/279 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG IG +L K L+ HE+TI + + + +KK PFN+ K + GD
Sbjct: 8 TGGAGFIGRHLVKALIKQNHEITIYDNFSNSSKENLKKFPFNK--------SKVITGDIR 59
Query: 143 EVGNV-VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFI 185
+ +V + D+V+ K N+D V + +K+ +
Sbjct: 60 NLDDVSKNSIDNDIVIHLAAKISVNESIQNPQETFETNVDGTENVLKACHVNKIKKIFAL 119
Query: 186 SSAGIYKPADEPPHV--EGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIG 235
SSA +Y + HV E + + P + + + ++ + E N++ FR + G
Sbjct: 120 SSAAVY-GNNILNHVSIESENIHPISPYGKSKQKMEEKIINFSKNYDFDSKIFRLFNVYG 178
Query: 236 SGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G + + F + +K P+ I G G Q + + D+ ++ + + I
Sbjct: 179 EGQSPEYAGVISKFVECSKKKLPLTIFGDGKQTRDFVAIEDVVNLFVKVISLDSKKNGEI 238
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
+N+ S + ++ +A L + + +EI + ID
Sbjct: 239 YNVASGKYTSILELANLIKKLSNKELEIKFEKKRIGEID 277
>gi|218897455|ref|YP_002445866.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842]
gi|228905448|ref|ZP_04069402.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|228968976|ref|ZP_04129920.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402560312|ref|YP_006603036.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|434375424|ref|YP_006610068.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
gi|218541889|gb|ACK94283.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842]
gi|228790720|gb|EEM38377.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228854180|gb|EEM98884.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|401788964|gb|AFQ15003.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|401873981|gb|AFQ26148.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
Length = 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|409422462|ref|ZP_11259559.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. HYS]
Length = 309
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIV--SA 132
+GG IG +L+ LL G+ V I+ + G ++ +M P E+V +A
Sbjct: 9 TGGAGFIGSHLSDALLEKGYAVRILDDLSSGKRSNLQMDNPRLQLVEGDVADAELVKRAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + +G+K+ LF SSA +Y
Sbjct: 69 AGCQAVVHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRLNGIKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ D VK V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGQSIDEDTVKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL S++ A+E A + N+
Sbjct: 185 SPYSGVISIFCERALNGTPITLFGDGEQTRDFLYVGDLVSVMVQALEMAAVAEGAV-NIG 243
Query: 297 SDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAG 329
++A +L+ +A L + LP + Y P +G
Sbjct: 244 LNQATSLNQLLAALKSVVGDLPA--ISYGPARSG 275
>gi|448419875|ref|ZP_21580719.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
gi|445674789|gb|ELZ27326.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
Length = 330
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 40/280 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL G+EV I G+ + PF + G D ++
Sbjct: 9 GGTRFIGRHAVEDLLDHGYEVAIFNRGNHEN------PFADDERVTRVEGDRT--DDTDL 60
Query: 145 GNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D +++A + S V +++ISS Y +E P E
Sbjct: 61 KTAKLSVEPDVVIDCVAYYPADVEAAVEI-----FSDVDAYVYISSGAAYG-REEIPKRE 114
Query: 202 GDV----VKPDAG-----------HVQVEKYISENFS---NWASFRPQYMIGSGNNKDCE 243
G+ PD + ++ + E + N S RP + G + +
Sbjct: 115 GETPLCECTPDQAADDSDETYGPRKAEGDRIVFEAATEGVNAMSVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ +R+ + +PG G + A+V D++S L + E +N+ R TL
Sbjct: 175 DYWINRVEEYDRLVVPGDGTNLWHRAYVGDVASALRIVAER--GTPGEAYNVGDRRLATL 232
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 340
+ L A+AA V++VH + AAG+ +++ +R+
Sbjct: 233 EETVDLIAEAAEESVDVVHAGERELAAAGLASEEFVLYRD 272
>gi|448473282|ref|ZP_21601424.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445818794|gb|EMA68643.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 330
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL + +EV ++ G+ + PF + + G D +
Sbjct: 9 GGTRFIGRHTVSELLANDYEVAMVNRGNHEN------PFAANDRVTHVAGDRT--DRQTL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------KPADEPP 198
V DVV+D + V D + V +++ISS Y K DE P
Sbjct: 61 RAAKRSVDPDVVIDCVAYHPADVEAATD--VFADVDGYVYISSGSSYGAEEIPKREDETP 118
Query: 199 ------HVEGDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
D + G+ + E +E N + RP + G + + +++
Sbjct: 119 LCGCTPEQATDDSQDTYGNRKAEGDRAVFAAAEAGVNAVAVRPCIVYGPHDYTERLDYWI 178
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DR++ V +PG G A+V D++S L +A E E ++ +N+ RA+TL
Sbjct: 179 DRVLSYDRVVVPGDGQNVWQRAYVEDVASALRIAAERGEPGAA--YNVGDRRALTLAETV 236
Query: 308 KLCAQAAGLPVEIV 321
+ A AA E+V
Sbjct: 237 ETIADAADTDCEVV 250
>gi|163789343|ref|ZP_02183784.1| hypothetical protein FBALC1_05263 [Flavobacteriales bacterium
ALC-1]
gi|159875411|gb|EDP69474.1| hypothetical protein FBALC1_05263 [Flavobacteriales bacterium
ALC-1]
Length = 391
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 127/317 (40%), Gaps = 45/317 (14%)
Query: 30 RLSFSSYSHLSSL-VSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHA 88
R +F L+S+ + + S+ ++C + +++ A T ++K +LI+ GG +
Sbjct: 7 RRTFIKKGALASIAIPLLGSNLISCKSETQKEPNEAKT----ESKKLSILIL----GGTS 58
Query: 89 VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV 148
+G + + GH+V+ T G + + F++ +++ GD +
Sbjct: 59 FLGPHQVAYAISRGHKVSTFTRG-KTKPTVHAEIFDQVEQLI--------GDRENNLKAL 109
Query: 149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP--------------- 193
+DVV+DN+G+ ++ + A+ K + V +++ SS G+Y P
Sbjct: 110 ENRKWDVVIDNSGRKVEWTKATANLLKDN-VGMYMYTSSTGVYYPYLTDNISEETKLVLS 168
Query: 194 ------ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
DE E V+K G+ ++E + RP YMIG + D +
Sbjct: 169 MPEGLTEDEQYEQEYGVMK---GNSELEAIKAFGKERTIVVRPTYMIGPADKTDRFIHWP 225
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
R+ + + +P VRD++ EN + + N + A T+
Sbjct: 226 IRLAKGGEILVPSKKEDPVQYVDVRDIAEWFIRLAENQQHGTYN--GVGPKDAQTMQEFV 283
Query: 308 KLCAQAAGLPVEIVHYD 324
K AQ+ + V D
Sbjct: 284 KQAAQSFDVKSSFVMVD 300
>gi|452965528|gb|EME70550.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum sp. SO-1]
Length = 332
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 51/287 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVW 138
+GG +G L +LL +GH+VT++ + E+ AG + +
Sbjct: 11 TGGAGYVGSVLVPKLLEAGHKVTVLD-------------LYLYGEVFEGLKGHAGLREIK 57
Query: 139 GDPAEVGNVVGGVT-FDVVLD--------------NNGK--NLDAVRPVADWAKSSGVKQ 181
GD ++ V ++ D V+ N G+ N DA RP+ AK +GV++
Sbjct: 58 GDIRDISKVEEALSGCDAVIHLACISNDPSYDLDPNLGRSINHDAFRPLVQAAKRAGVER 117
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW-------ASFRPQYMI 234
F++ SS+ +Y DEP E ++P + + + + + RP +
Sbjct: 118 FIYASSSSVYGIKDEPEVTEDLSLEPLTDYSRFKALCEQELLEERAPGFTVCTIRPSTVC 177
Query: 235 GSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SS 290
G + + F ++ V + + G + NI H+ D++++ ++ P
Sbjct: 178 GFAPRQRLDVVVNIFTNQAVNNGKIRVTGGPQKRPNI-HIEDMAAVYLYLLDQPAGKIDG 236
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKK 334
I+N D + +A++ + G VEI DP++ + KK
Sbjct: 237 KIWN-AGDTNFPISQLAEIVRKVVGEHVEIETLPTNDPRSYHVSGKK 282
>gi|88604312|ref|YP_504490.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
gi|88189774|gb|ABD42771.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
Length = 343
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 214
N NL + + A G K F+F SS +Y A EPP E P+ + + V
Sbjct: 97 NYTNNLIGSINLINEAVKVGTKCFVFTSSIAVYG-AIEPPMTEEKTPHPEDPYGISKLAV 155
Query: 215 EKYISENFS----NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQF 265
E + S N+ FRP + G N ++ F +I +P+ I G G Q
Sbjct: 156 ELDLMAAHSMFGLNYVIFRPHNVYGEYQNLSDPYRNVIGIFMKQIFEGQPMTIFGDGEQQ 215
Query: 266 TNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVH 322
++V D+ + L V++P A +N+FN+ +D+ T++ +A A A G P VH
Sbjct: 216 RAFSYVGDI---IPLIVQSPTIPGALNNVFNVGADKPYTVNELASKVAIALGKPDHPTVH 272
Query: 323 YDPK 326
P+
Sbjct: 273 LPPR 276
>gi|448640639|ref|ZP_21677542.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
gi|445761949|gb|EMA13188.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
Length = 359
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 40/277 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G ++ PF E+ G D E
Sbjct: 40 GGGRFIGRHTVTEFRDAGYDVTMLTRG------RRQNPFTN-AEVAHIEGDRRERDTLET 92
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D G +++ISS Y A+ P EG+
Sbjct: 93 ARER--VNPDVVVDCVAYFPEDVRVATDVFADVGA--YVYISSGAAYG-AERTPKREGET 147
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 148 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVQAMSVRPTVVYGPYDYTERFA 205
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ V +P G+ +A+V D++S L L E A+ +N+ + A TL
Sbjct: 206 YWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASALRLVAER--GAAGEAYNVGDEHAPTLR 263
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPF 338
L A+ VE + + +AAG+ A FP
Sbjct: 264 EWVDLLARVHETDVETIGVGERELRAAGL-APDDFPI 299
>gi|398333101|ref|ZP_10517806.1| UDP-glucose 4-epimerase [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 330
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 34/263 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLNEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLD-NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + + +F++ D NLDA RP+ + +K + VK+F++ SS+ +Y
Sbjct: 71 HDSVI-----HLACISNDPSFELNPDLGKSINLDAFRPLVEISKKNRVKRFIYASSSSVY 125
Query: 192 KPADEP---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
DEP P + K D + E Y +++F+ + RP + G +
Sbjct: 126 GIKDEPNVTEDFSLEPLTDYSKFKADCEKILAE-YQTDDFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
T+ +A + + G V++V
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLV 264
>gi|160940253|ref|ZP_02087598.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
gi|158436833|gb|EDP14600.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
Length = 337
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG I +A + G EVT++ NR ++ V G +++ D
Sbjct: 7 GGTGTISTAVAALAMDKGWEVTLL---------------NRGSKPVPEGMESMVADIHDE 51
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYK------PA 194
A V ++ G T+DVV + V R + + + + +Q++FISSA Y+ P
Sbjct: 52 AAVARIMEGRTYDVVAQFIAYGAEDVQRDIRLFQEKT--RQYIFISSASAYQKPAAGCPI 109
Query: 195 DEP-----PHVEGDVVKPDAGHVQVEKYISENF--------SNWASFRPQYMIGSGNNKD 241
E P+ E K DA V Y F + +P I G+ +
Sbjct: 110 TESTPLINPYWEYSRKKIDAEEVLTAAYRKNGFPVTIVRPSHTYDGKKPPVAI-HGHKGN 168
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+ RI+ +PV IPG G + H D + + NP A N +++ SD ++
Sbjct: 169 WQ--ILKRILEGKPVIIPGDGTSLWTLTHSADFARGYVGLMGNPHAI-GNAYHITSDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A+A P+ +H
Sbjct: 226 TWNQIYETLAEALDRPLNALH 246
>gi|427707127|ref|YP_007049504.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
gi|427359632|gb|AFY42354.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
Length = 322
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM--TVGDENSDKMKKPP---------F 123
++V++V +GG IG +L +EL+ G+ V ++ + + + PP
Sbjct: 3 RQVVLV---TGGCGFIGSHLVEELVNRGYYVRVLDNLYTGKLENLLAVPPDRWEWIKGDV 59
Query: 124 NRFNEIVSA--GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+N + A G V+ A + N+ +F + + N V A VK+
Sbjct: 60 TNYNHVKKATQGCDYVFHQ-AAIANIAA--SFQDTVGTHQVNYGGTANVLKAAHHCRVKR 116
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEK----YISENFSNWASFRPQYM 233
+F SSA +Y P E P A + E+ Y + + S R +
Sbjct: 117 VIFASSAAVYGNDPTLPKRESMPTHPISPYGADKLASEQLGQIYHQQGLVEFVSLRYFNV 176
Query: 234 IGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G N D F DRI + P I G+G+Q + HV D+ +A+++P+AA
Sbjct: 177 FGLRQNSDYTGVISQFCDRIRQSVPPIIYGNGLQSRDFIHVSDVVQANLIAMKHPQAAGK 236
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAA----------GLPVEIVH 322
IFN+ +A +L + L Q GLP +I H
Sbjct: 237 -IFNIGCGQATSLLELIALLNQITKQNLRPIFRPGLPGDIHH 277
>gi|423360520|ref|ZP_17338023.1| hypothetical protein IC1_02500 [Bacillus cereus VD022]
gi|401081516|gb|EJP89790.1| hypothetical protein IC1_02500 [Bacillus cereus VD022]
Length = 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGENITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|347531318|ref|YP_004838081.1| hypothetical protein RHOM_05150 [Roseburia hominis A2-183]
gi|345501466|gb|AEN96149.1| hypothetical protein RHOM_05150 [Roseburia hominis A2-183]
Length = 296
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 43/226 (19%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEI 129
EK+ ++V GG G +L ELL GHEVTI T G D+ D++++ +R
Sbjct: 2 EKRMNILV---LGGTGFFGKHLVWELLHRGHEVTIATRGRTPDDFGDRVRRLIVDR---- 54
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
D ++ V +DV D+ VR V + + ++++ +SSA
Sbjct: 55 ---------TDVRQMEQVFAHKYYDVFYDDLAYCAGDVRTVLE---AVPCRRYVMVSSAS 102
Query: 190 IY-------KPADEPPHVE----------GDVVKPDAGHVQVEKYISENFSNWASFRPQY 232
+Y + EP H DV+K A V++Y N A R Y
Sbjct: 103 VYDLHFQTVETDYEPEHDRLVWYTDYSGSYDVLKKSAECALVQQY---PMKNAAFVRFPY 159
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+IG + D ++ + +VR++P+ I Q + I+ V D +L
Sbjct: 160 VIGRDDYTDRLYFYVEHVVRQKPMYIDNMDAQMSFIS-VDDAGRLL 204
>gi|448630383|ref|ZP_21673038.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
gi|445756306|gb|EMA07681.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
Length = 327
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+ VL++ GG IG + E +G++VTI+T G R N
Sbjct: 2 ESVLVI----GGGRFIGRHTVTEFRDAGYDVTILTRG------------QRSNPFADTDV 45
Query: 135 KTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V GD E + V DVV+D D VR D + V +++ISS Y
Sbjct: 46 AHVEGDRRERVTLETARDQVEPDVVVDCVAYFPDDVRVATD--VFADVDAYVYISSGAAY 103
Query: 192 KPADEPPHVEGDVVKPDAGHV-------QVEKY-------------ISENFSNWASFRPQ 231
A+ P E + P AG E Y +E+ S RP
Sbjct: 104 G-AERTPKREAET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVRAMSVRPT 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + + ++ DR+V V +P G+ +A+V D++S L L E A +
Sbjct: 161 VVYGPHDYTERFAYWVDRVVEHEQVVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA- 219
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+N+ + A TL L A+ VE +
Sbjct: 220 -YNVGDEHAPTLREWVDLLARVHDTSVEAI 248
>gi|448507278|ref|ZP_21614896.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|448523824|ref|ZP_21619011.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445698647|gb|ELZ50687.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|445700897|gb|ELZ52888.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
Length = 330
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRVVAERGEPGTA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A AG+ E V
Sbjct: 231 TLRETLETIADVAGVDCEFV 250
>gi|254168016|ref|ZP_04874864.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289595956|ref|YP_003482652.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
gi|197623059|gb|EDY35626.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289533743|gb|ADD08090.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
Length = 285
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--VQVEKYISENFS---- 223
+ ++A+ V+QF++ISSA +Y EP ++ D P + K E +S
Sbjct: 85 LLEYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYS 141
Query: 224 -----NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
AS RP + + + F R + P+ I G G Q + +V+D
Sbjct: 142 ELYGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQD 201
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+ ++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH P+ D +
Sbjct: 202 VVHLVKLALAK---KADGVYNCGTGKETSINELAKIIAELSGKGIKIVHDKPREG--DIR 256
Query: 334 KAF 336
K++
Sbjct: 257 KSY 259
>gi|218135292|ref|ZP_03464096.1| hypothetical protein BACPEC_03197 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990677|gb|EEC56688.1| NAD dependent epimerase/dehydratase family protein [[Bacteroides]
pectinophilus ATCC 43243]
Length = 290
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N + +AD+AK++GV F++ISS + P E VKP A KY E
Sbjct: 85 NCLGTQNIADFAKTAGVSCFVYISSVPVIGIPQYVPITEKHPVKP-ATVYHYTKYFGEQI 143
Query: 223 SN--------WASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ R +G G +NK F R + +P+ I G+GM+ N VR
Sbjct: 144 VQGLGACGIRYGCLRIPSPVGCGMPDNK-IFSVFVKRCLENQPLQIYGNGMRVQNYLDVR 202
Query: 273 DLSSMLTLAVEN-PEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
D LT AV+ E+ ++ ++N+ + ++ +A+LC +
Sbjct: 203 D----LTCAVDRFIESDANGVYNIAGNSISDME-LAELCKE 238
>gi|424827686|ref|ZP_18252457.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
gi|365979954|gb|EHN15999.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
Length = 728
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK----KPPFNRFN------EIVSAG 133
+GG+ IG ++ + G+EV I + + +S K++ K F +F+ E V
Sbjct: 6 TGGYGFIGSHVVERFAKEGYEVFI--IDNMSSGKLENVNCKHKFYKFDVEDKRCEFVFKN 63
Query: 134 GK--TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V A++ NV+ + D LD N+ + + + + VK+F+F SSA IY
Sbjct: 64 NNFDIVVHLAAQI-NVITSLK-DPFLDTKT-NILGLVNMLELSTKYKVKKFIFASSAAIY 120
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNW--------ASFR-------PQYMIG 235
+ P E ++ +P + + + KY+ E + W FR Q +IG
Sbjct: 121 GNNENIPLTEREIAEPLSPY-GISKYVGEGYCKKWNEIYNLDTICFRFSNVYGPRQGIIG 179
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G F D I + + + + G G Q + +V DL+ L A E+ SS ++NL
Sbjct: 180 EGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAAESN--ISSGVYNL 234
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
++ +L+ + K+ + I D K
Sbjct: 235 STNSRSSLNNLIKILNNLKNIKGIIKKEDRKG 266
>gi|115373575|ref|ZP_01460871.1| isoflavone reductase [Stigmatella aurantiaca DW4/3-1]
gi|115369417|gb|EAU68356.1| isoflavone reductase [Stigmatella aurantiaca DW4/3-1]
Length = 359
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 36/257 (14%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKK+LI+ GG A +G L + L GH +T+ N K + F + ++
Sbjct: 17 KKKILIL----GGTAFLGPALVERALSRGHTLTLF-----NRGKTRPGLFPQVEKLQ--- 64
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD + G +D V+D +G V+ A+ + V +LF+SS +Y
Sbjct: 65 -----GDRDGKLQALEGRQWDAVIDTSGYVPRVVKASAELL-APNVGHYLFVSSISVYGD 118
Query: 194 A-------DEPPHVEGDVVKPD-AGHVQVEKYISENFSNWA------SFRPQYMIGSGNN 239
D P D D + H K + E + A + RP ++G +
Sbjct: 119 TSKGGIGEDSPVATVADETTEDVSQHYGALKALCEKAAEAALPGRVSNVRPGLIVGPDDP 178
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD- 298
D ++ R+ + V PG G VRDL++ L VE+ + +FN
Sbjct: 179 TDRFTYWPVRVAQGGEVLAPGDGEDPVQFIDVRDLAAFLIGLVEH---QAMGVFNATGPA 235
Query: 299 RAVTLDGMAKLCAQAAG 315
+++ G+ + C A G
Sbjct: 236 ETLSMRGLLETCKAAHG 252
>gi|406892407|gb|EKD37764.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 341
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 20/253 (7%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE----IVSAGGKTVWG 139
+GG G L + LL GH+V ++ V + ++ P +E +A K V G
Sbjct: 6 TGGTGFTGHNLTQRLLQDGHQVRLL-VRSRSRVALEPQPTLEIHEGDIRDRAAVDKAVAG 64
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNL--DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
A++ N+ +D + +++ + R + + A V++F+ S+ G++ P
Sbjct: 65 -VAKIFNLAAMYRTASAVDQDYRDIHVEGTRHLLEAAVRHHVERFVHCSTVGVHGDVKAP 123
Query: 198 PHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P E P G + ++ + N RP + G G+ + + F
Sbjct: 124 PATEESPYAPADIYQRTKLEGELLAREFAARNGLALTVIRPTAIYGPGDLRLLK--LFKL 181
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
VR P+ G+G + ++ ++ DL LA E EAA +F + + + LD +
Sbjct: 182 AVRN-ITPVIGTGKIYYHMVYIDDLVEGFILASE-AEAAIGQVFIVGGEEKMVLDDLLSA 239
Query: 310 CAQAAGLPVEIVH 322
A+ G P +H
Sbjct: 240 IARITGRPESKIH 252
>gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 328
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 45/292 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG +LA+ L GH++ I+ +N + P R N +AG G
Sbjct: 6 TGGAGFIGSHLAERLFLCGHDIIIV----DNFNDFYSPAVKRRNFTETAGNAAACGRRLL 61
Query: 141 --------------------PAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKS 176
P V ++ +DN N+ + + AK+
Sbjct: 62 LCEGDIRDEEFIRAIFTQELPDAVIHLAAAAGVRPSIDNPLLYEEVNVRGTMNLLEAAKA 121
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVV---------KPDAGHVQVEKYISENFSNWAS 227
GV+ FLF SS+ +Y + P E D V AG + Y N A
Sbjct: 122 IGVRLFLFASSSSVYGNNPKVPFAEADPVDNPISPYAATKKAGELICHTYHHLYDINIAC 181
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE--N 284
R + G D F R++ + +P+P G G + ++ D+ + + A++ N
Sbjct: 182 LRFFTVYGPRQRPDLAISKFVRLIEQGKPIPFYGDGSTSRDYTYIGDIVAGIEKALQWVN 241
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
+IFNL V L+ + K+ G ++ P AG D ++ F
Sbjct: 242 TGEKRYDIFNLGGSSPVALNRLVKIIEHQLGKKA-VLECLPMQAG-DVERTF 291
>gi|448319353|ref|ZP_21508852.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
gi|445607956|gb|ELY61827.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
Length = 232
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
S RP + G + + +++ DR+ R V +PG G + A+V D++S L L E +
Sbjct: 60 SVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAEEGD 119
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
A + +N+ R VTL+ M L A VE+V P+
Sbjct: 120 AGEA--YNVGDRRLVTLEEMVTLIADQLDTTVEVVTAGPR 157
>gi|111023767|ref|YP_706739.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1]
gi|397737301|ref|ZP_10503973.1| UDP-glucose 4-epimerase [Rhodococcus sp. JVH1]
gi|419965927|ref|ZP_14481862.1| UDP-glucose 4-epimerase [Rhodococcus opacus M213]
gi|432340391|ref|ZP_19589833.1| UDP-glucose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
gi|110823297|gb|ABG98581.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1]
gi|396926740|gb|EJI93977.1| UDP-glucose 4-epimerase [Rhodococcus sp. JVH1]
gi|414568601|gb|EKT79359.1| UDP-glucose 4-epimerase [Rhodococcus opacus M213]
gi|430774584|gb|ELB90170.1| UDP-glucose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
Length = 330
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VVSDVLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 282
>gi|373854258|ref|ZP_09597056.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV5]
gi|372472125|gb|EHP32137.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV5]
Length = 324
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 18/245 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +LA LL G +VT + + + + + K F + + +T+ P +
Sbjct: 8 GGEGFIGRHLADRLLNDGQQVTSVDLAESDRREGIKRRFVTADVRGTLTFETLEASPPVL 67
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
N+ V D NL+ V D+A+ +GV+ +F SS Y A E E
Sbjct: 68 FNLAAVHRTPGHPNRDYFDANLNGAENVCDFARKTGVRTIVFTSSIAPYG-ASEELKTEE 126
Query: 203 DVVKPDAGHVQVEKYISENF-SNWAS----------FRPQYMIGSGNNKDCEEWFFDRIV 251
+ P+ + + K ++E+ W + RP + G G + ++ +
Sbjct: 127 TLPTPNTAY-GISKLVAEHIHRRWQAEKPSERRLVIVRPGVVFGHGEKGNVTRLYW--AL 183
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
R++ PG +V+D++++L E PE+ ++NL + A T+ + + +
Sbjct: 184 RRKRFAYPGRTDTIKASIYVKDVAALLAEMSERPESGVF-VYNLTYEPAPTIKDICTVMS 242
Query: 312 QAAGL 316
G+
Sbjct: 243 TVTGV 247
>gi|310825061|ref|YP_003957419.1| NAD dependent epimerase/dehydratase family protein [Stigmatella
aurantiaca DW4/3-1]
gi|309398133|gb|ADO75592.1| NAD dependent epimerase/dehydratase family [Stigmatella aurantiaca
DW4/3-1]
Length = 379
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 36/257 (14%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKK+LI+ GG A +G L + L GH +T+ N K + F + ++
Sbjct: 37 KKKILIL----GGTAFLGPALVERALSRGHTLTLF-----NRGKTRPGLFPQVEKLQ--- 84
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD + G +D V+D +G V+ A+ + V +LF+SS +Y
Sbjct: 85 -----GDRDGKLQALEGRQWDAVIDTSGYVPRVVKASAE-LLAPNVGHYLFVSSISVYGD 138
Query: 194 A-------DEPPHVEGDVVKPD-AGHVQVEKYISENFSNWA------SFRPQYMIGSGNN 239
D P D D + H K + E + A + RP ++G +
Sbjct: 139 TSKGGIGEDSPVATVADETTEDVSQHYGALKALCEKAAEAALPGRVSNVRPGLIVGPDDP 198
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD- 298
D ++ R+ + V PG G VRDL++ L VE+ + +FN
Sbjct: 199 TDRFTYWPVRVAQGGEVLAPGDGEDPVQFIDVRDLAAFLIGLVEH---QAMGVFNATGPA 255
Query: 299 RAVTLDGMAKLCAQAAG 315
+++ G+ + C A G
Sbjct: 256 ETLSMRGLLETCKAAHG 272
>gi|116621061|ref|YP_823217.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224223|gb|ABJ82932.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 356
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 34/276 (12%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P++S R +S T++ S +V+I+ GG IG YL L+ +GH V ++ G
Sbjct: 19 PSASVRQWLSCRTMEISLM---RVVII----GGSGHIGSYLTPRLVEAGHSVFCVSRG-- 69
Query: 114 NSDKMKKP-----PFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVR 168
+K+P + R +V ++V G + + D V+D ++
Sbjct: 70 ----LKQPYVEHVAWKRVESVVL--DRSVEEAAGTFGGKIRDLEPDCVIDLTAYTRESTE 123
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSN 224
+ + A V+QFL + ++ P E P E +P + + ++E Y+ E
Sbjct: 124 QLVE-ALRGRVQQFLHCGTIWVHGPTVEAPVAEDQPRRPISEYGVRKAEIEAYLLEEARR 182
Query: 225 W----ASFRPQYMIGSG-----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
P +++G G + F + R + +P G + + H D++
Sbjct: 183 HEFPATVLHPGHLVGMGWVPLNPAANFNPAVFADLAAGREIVLPNLGRETLHHVHADDVA 242
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
A+++ AA F++VS AV++ G A+ A
Sbjct: 243 QAFVQAMDHWPAAVGECFHVVSPAAVSMAGYAEAVA 278
>gi|423207519|ref|ZP_17194075.1| hypothetical protein HMPREF1168_03710 [Aeromonas veronii AMC34]
gi|404620586|gb|EKB17483.1| hypothetical protein HMPREF1168_03710 [Aeromonas veronii AMC34]
Length = 332
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 42/281 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
++ A G GG+ +D+ +D + ++ A + +FIS+ +Y+
Sbjct: 53 SL---SALQG---GGLQWDLAIDTCCYRPEQAASLSA-ALLGCCARLIFISTISVYRDFS 105
Query: 196 EPPHVEGDVVKP--------DAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCEE 244
P E + P D G ++V E+Y + RP + G +
Sbjct: 106 IPGMDESAPLHPIPEGETPTDYGPLKVLCEEEYRARWGERLCILRPGVLCGPHDPTGRMA 165
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
W+ R+ + P +PG G VRD + + A E FNL+ D
Sbjct: 166 WWIKRVQQGGPWLLPGCGEDRLQYLDVRDCAEFVLRAAEQ---QLGGTFNLLKPGITLCD 222
Query: 305 GMAKLCA--------QAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ +L A Q LP + AAGI+ +++P
Sbjct: 223 WLERLSARLPPARPIQPEWLPWPTL----MAAGIEPWQSYP 259
>gi|187734545|ref|YP_001876657.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
gi|187424597|gb|ACD03876.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
Length = 308
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--------GHVQV 214
N++ + V + A ++GVK+ + SSA IY P +E +P + G +
Sbjct: 92 NVNGLLNVLEEASAAGVKKIVLASSAAIYGDNPTVPKLETMYPEPKSPYAITKLDGEYYL 151
Query: 215 EKYISENFSNWASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ +E N A+ R + G G F ++ V+ + + G G Q +
Sbjct: 152 NMFRAEGKINTAAVRFFNVFGPRQDPKGAYAAAVPIFIEKAVKGEDITVYGDGSQTRDFI 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+V+D+ LT E+PE + +FN +T++ +A+ +AAG +++H
Sbjct: 212 YVKDIVGALTFVAEHPEV--TGVFNAGYGGQITIEELAQNIIKAAGSSSKVLH 262
>gi|116668831|ref|YP_829764.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
gi|116608940|gb|ABK01664.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
Length = 338
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 29/271 (10%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
++ A+ A +L + GG VI A+ + GH +TI+ N K P
Sbjct: 1 MSLPATVAAPSDILFI----GGTGVISAAAAEHAVALGHRLTIL-----NRGKSAGRPTP 51
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD-AVRPVADWAKSSGVKQFL 183
E+V+A + D A V + G TFD V D + A + ++ +G Q++
Sbjct: 52 EGAEVVTADIR----DSAAVREALRGRTFDAVADFISFTPEHAAAAIEQFSGRTG--QYV 105
Query: 184 FISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYM 233
FISSA Y KP P +E ++ +K E+ A RP +
Sbjct: 106 FISSASAYQKPPARLPILESTPLRNPFWQYSRDKIACEDLLMRAYRDDGFPVTVVRPSHT 165
Query: 234 IGSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
W R+ PV + G G + H RD + ++ P+A +
Sbjct: 166 YDRTKIALLGGWTDIHRMREGLPVLVHGDGTSLWTLTHSRDFAKAFVGLLDRPQAVGES- 224
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
+ + SD + D + +L A+AAG+ E+VH
Sbjct: 225 YTITSDEFLPWDQVYRLFARAAGVAEPELVH 255
>gi|330830547|ref|YP_004393499.1| Isoflavone reductase [Aeromonas veronii B565]
gi|423208778|ref|ZP_17195332.1| hypothetical protein HMPREF1169_00850 [Aeromonas veronii AER397]
gi|328805683|gb|AEB50882.1| Isoflavone reductase [Aeromonas veronii B565]
gi|404618623|gb|EKB15543.1| hypothetical protein HMPREF1169_00850 [Aeromonas veronii AER397]
Length = 332
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-- 193
++ A G G+ +D+V+D + ++ A + +FIS+ +Y+
Sbjct: 53 SL---SALQG---AGLQWDLVIDTCCYRPEQAASLSA-ALLGCCARLIFISTISVYRDFS 105
Query: 194 -----ADEPPHV--EGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
P H EG++ D G ++V ++Y + RP + G +
Sbjct: 106 MPGMNESAPLHAIPEGEM-PTDYGPLKVLCEQEYRARWGERLCILRPGVLCGPHDPTGRM 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ + P +PGSG VRD + + A E + FNL+ +
Sbjct: 165 AWWIKRVQQGGPWLLPGSGEDRLQYLDVRDCAEFVLRAAEQQLGGT---FNLIKPGIILC 221
Query: 304 DGMAKLCAQ---AAGLPVEIVHYDP-KAAGIDAKKAFP 337
D + +L A+ A + E + + AAGI+ +++P
Sbjct: 222 DWLERLSARLQPARSIQPEWLPWSTLMAAGIEPWQSYP 259
>gi|158316985|ref|YP_001509493.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
gi|158112390|gb|ABW14587.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
Length = 368
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+V GG G ++ + LLG GH+VTI G +PP E+ +
Sbjct: 2 KVLVV----GGTGPTGPHIVRGLLGRGHDVTIFHRG------AHEPP-----ELADV--E 44
Query: 136 TVWGDP---AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GDP + +G FDVVL G+ + + P A + QF+ I IY+
Sbjct: 45 HIHGDPHFRESIDEALGLREFDVVLAMYGR-MRHLSP----ALAGRCGQFVGIGGVPIYQ 99
Query: 193 ---PAD-----------EPPHVE----GDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
P D E P V+ V+ V E+ + FR +
Sbjct: 100 GFFPGDGRHRLPIPVTEEHPVVQERSDDPAVRFSRRLVDAEEAAFAHHPGATLFRFPMLY 159
Query: 235 GSGNNKDCEEWFFDRIVRK-RP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G NN EW R VR RP + +P G Q R+ ++ + AV+ P+AA+ I
Sbjct: 160 GP-NNARPAEWSIVRRVRDGRPYIILPDGGSQIHTRCAARNAAAFVLAAVDRPQAAAGQI 218
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+N +L +L + G +E+V
Sbjct: 219 YNAGDPTDWSLRQWVELIVRLMGADLEVV 247
>gi|112359369|gb|ABI15605.1| UDP-glucose 4-epimerase [Spironucleus barkhanus]
Length = 306
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F DR +R P+ I G G Q + +V+DL + A + +S +FN+ + R+ +
Sbjct: 182 FIDRALRGIPITIFGDGEQTRDFVYVKDL---VCGAFALLDGGASGVFNIGTGRSTAVQR 238
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGI 330
+A++CA G EIVH +P+ I
Sbjct: 239 LAEICADLGG--SEIVHAEPRDGDI 261
>gi|148263747|ref|YP_001230453.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146397247|gb|ABQ25880.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 309
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM--TVGDENSDKMKKPPFNRF-----NEIVSA---- 132
+GG IG L K+LL GHEVT++ + S+ P +++V A
Sbjct: 6 TGGAGFIGSNLVKQLLKDGHEVTVLDNLLSGYRSNIATFPEVCLIEGDIRDDVVVAEAMK 65
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + V+ A VGN + D + + N+ + + A+ G+++ + SSAGI+
Sbjct: 66 GVEVVFHLAASVGN---KRSIDHPILDAEINVIGTLKILEAARKFGIRKIVASSSAGIFG 122
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP------QYMIGSGNNKDCEEW- 245
P E V+PD+ + + + + ++A +Y G N+ + +
Sbjct: 123 ELKTLPIKEDHPVEPDSPYGSTKLCMEKECLSYAKLYDLEAVCLRYFNVYGLNQRFDAYG 182
Query: 246 -----FFDRIVRKRPVPIPGSGMQFTNIAHVRD-----LSSMLTLAVENPEAASSNIFNL 295
F +++R P+ I G G Q + VRD + + +TL V S FN+
Sbjct: 183 NVIPIFAYKMLRGEPLTIFGDGEQTRDFLDVRDVVQANIKAAMTLGV-------SGAFNI 235
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
S +T++ + +L + A+ + + H P+
Sbjct: 236 ASGSRITINRLVELLSAASAINPLVQHGPPR 266
>gi|441154723|ref|ZP_20966598.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618139|gb|ELQ81219.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 328
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 43/274 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + L G +VT+ F+R G V GD +
Sbjct: 3 GGTEFVGRAVTEAALARGWQVTV---------------FHRGRHAPVPGTAVVHGDRTDA 47
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE- 201
+ + T+DVV+D AVR A + +++++S+ +Y+ P H E
Sbjct: 48 ATLTALADGTWDVVVDTWAGAPTAVRDAAR-LLADRAGRYVYVSTGSVYRHPAGPGHTEA 106
Query: 202 GDVVK--PDAGHVQ-VEKYISENFSNWASF--------RPQYMIGSGNNKDCEEWFFDRI 250
G +V PDA V E + A+F R ++G N W+ RI
Sbjct: 107 GPLVDGSPDAEAVAYAEDKRGGELAALAAFGEDRTVLARAGMILGPWENIGRLPWWLTRI 166
Query: 251 VRKRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGM 306
R PV PG G+Q+ + VRDL++ + A E S +NL+S+ T+ +
Sbjct: 167 ARGGPVLAPGPRDLGLQYID---VRDLAAWVLHAAET---GLSGPYNLISEPGHATMGEL 220
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
+ C G E+ P+ AAG+ P
Sbjct: 221 LEACVAVTGSDAELRWSGPEEILAAGLAPWTELP 254
>gi|334703778|ref|ZP_08519644.1| isoflavone reductase [Aeromonas caviae Ae398]
Length = 331
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 32/275 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ G +
Sbjct: 2 KLLII----GGTGFLGRHLTTLALDWGHEVTLF-----NRGHRQHPDWRELTQL--HGDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD A + G +D+V+D + ++D A + +FIS+ +Y+
Sbjct: 51 D--GDLAPLRGE--GRHWDLVIDTCCYRPEQAEGLSD-ALLGRCDRLIFISTISVYRDFS 105
Query: 196 EP------PHVEGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+P P E D G ++V Y + + RP + G + W+
Sbjct: 106 QPGMDESAPLHEMAGAPTDYGPLKVLCESVYRARWGDRLCTLRPGVLCGPFDPTARLAWW 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ R P +PG G VRD + + A E A FNL+ D +
Sbjct: 166 VRRVQRGGPWLLPGLGEDRLQYLDVRDCAEFVLRAAEQRLAGC---FNLIKPGIALNDWV 222
Query: 307 AKLCAQ---AAGLPVEIVHY-DPKAAGIDAKKAFP 337
+L A+ L +E + D AAG+ +++P
Sbjct: 223 ERLAARLTPVTPLQLEWAPWRDLMAAGVAPWQSYP 257
>gi|77165006|ref|YP_343531.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|76883320|gb|ABA58001.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
Length = 320
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQV 214
N N+ V + A +GV++ +F S+ G PP E + KP A +
Sbjct: 91 NFAVNVHGTLNVMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCG 150
Query: 215 EKYISENFSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 268
E Y ++ F Y S + K F +++ P+ I G G +
Sbjct: 151 EAYCHAFAKSYHLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDY 210
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
HV DL S + A+E P S F+L S R T+ +A + Q AG P +H+
Sbjct: 211 IHVEDLGSGIAAALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHF 264
>gi|406950676|gb|EKD80889.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 329
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G ++ + L GHEVTI G N KM F + E++
Sbjct: 2 KILIL----GGTKFLGRHIVEAALARGHEVTIFHRGLTNP-KM----FIQVEELL----- 47
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD N++ G +D +D +G VR D K + V+ + F+S+ +Y
Sbjct: 48 ---GDRTGDLNLLRGRKWDAAIDTSGYFPQVVRSSVDVLKDA-VQHYTFVSTISVYDDQH 103
Query: 193 ---PADEPPHV---EGDVVKPDAG------HVQVEKYISENFSNWASF-RPQYMIGSGNN 239
ADE + D +K A V E + + A RP ++G +
Sbjct: 104 LKSQADETAQLLPPADDTIKTMAPAQYGPLKVACEDVVHAAMAKRALIARPGLLVGPHDP 163
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
D W+ RI R PG+ + RD++ + E + + N+
Sbjct: 164 TDRFTWWIRRIARGGKTLAPGNPSRQIQFIDARDVADWIITMTEVAQTGTYNV 216
>gi|424852220|ref|ZP_18276617.1| UDP-glucose 4-epimerase [Rhodococcus opacus PD630]
gi|356666885|gb|EHI46956.1| UDP-glucose 4-epimerase [Rhodococcus opacus PD630]
Length = 327
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 3 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 51
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 52 VVSDVLGTSGIPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 112 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 172 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLADAHVL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 232 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 279
>gi|385799250|ref|YP_005835654.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
gi|309388614|gb|ADO76494.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
Length = 317
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
F++ AG ++ WG+ F++ NN + + + + A+ S +K+F++
Sbjct: 78 FHQAAQAGVRSSWGED-----------FEIYTHNN---IMGTQRLLEAARGSNIKKFVYA 123
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNW----ASFRPQYMIGS 236
SS+ +Y D+ P E + ++P + + V K EN + N+ S R + G
Sbjct: 124 SSSSVYGDTDKLPMKETNRLQPVSPY-GVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGE 182
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D F I++ + + I G G Q N HV D+ LA E+ + FN+
Sbjct: 183 RQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVDDIVKANILAAESDVEGEN--FNI 240
Query: 296 VSD--RAVTLDG---MAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRN 340
D R V D M K+ + A + +V D K D KA N
Sbjct: 241 GGDGKRVVLNDAISLMEKIIGKKANREYQKVVKGDVKHTSADTSKAKKLLN 291
>gi|190892423|ref|YP_001978965.1| mRNA-binding protein [Rhizobium etli CIAT 652]
gi|190697702|gb|ACE91787.1| putative mRNA-binding protein [Rhizobium etli CIAT 652]
Length = 326
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 41/267 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPAE 143
GG I + + + +GH V++ G +K P + IV G + + A+
Sbjct: 9 GGTGQISYPCVERAVAAGHHVSVFNRG------LKSTPLPAGVSSIVGELGSGAYAELAD 62
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEPPH--- 199
G +DVV D + R + ++ G Q++FISSA +Y ++PP
Sbjct: 63 AG-------YDVVCQFIAFTPDQIARDIEVFSGKCG--QYVFISSASVY---EKPPRHYV 110
Query: 200 --VEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG--NNKDCEEWFFDRI 250
E + P + Q + E W RP + + +G E R+
Sbjct: 111 ITEETPAINPYWPYSQAKIACEELLKKSGNLAWTIVRPSHTVRTGLPMMMGDSEIMARRL 170
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ P+ + G G + D + + + +AA + IF++ SDRA T D + K
Sbjct: 171 LDGEPIIVAGDGHTPWTLTRSADFAVPF-VGLFGKQAAVNEIFHITSDRAHTWDDIQKTI 229
Query: 311 AQAAGLPVEIVH--------YDPKAAG 329
A+ G+ +IVH Y+P+ G
Sbjct: 230 ARLLGVEAKIVHVPTDTLIKYNPEWVG 256
>gi|406947731|gb|EKD78610.1| nad-dependent epimerase/dehydratase [uncultured bacterium]
Length = 316
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 47/267 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L + L+ +GH V + DE +D P F +N + P
Sbjct: 7 TGGAGFIGSHLVQSLIQAGHSVVNI---DELNDYYN-PEFKHYNL------AQLPRHPFY 56
Query: 144 VGNVVGGVTFDVVLDNNGKN----LDA---VRP------------------VADWAKSSG 178
GN+ V + N L A VRP + D A G
Sbjct: 57 QGNICDAALLHTVFQKHRINKVIHLGARAGVRPSIQQPQLYEAVNYGGTAQLVDIATQHG 116
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDV----VKPDA-GHVQVEKYISENFSN----WASFR 229
++QF+F S++ +Y P E V + P A ++ E+Y+ E+ R
Sbjct: 117 IEQFIFGSTSAVYGNTASLPFTEEIVNLSPISPYAISKLKAERYLQEHHVRTDLPLTILR 176
Query: 230 PQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G D + F + I+ ++P+ G G + ++ D+ + + AV+ P
Sbjct: 177 FFTVYGERGRPDMAPYLFTEAILHQQPIKKFGDGSTSRDYTYIADIIAGIVAAVQQP--F 234
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAG 315
I NL + +AVTL+ QA G
Sbjct: 235 DFEIINLGNSKAVTLNEFISTLEQATG 261
>gi|423197561|ref|ZP_17184144.1| hypothetical protein HMPREF1171_02176 [Aeromonas hydrophila SSU]
gi|404631249|gb|EKB27885.1| hypothetical protein HMPREF1171_02176 [Aeromonas hydrophila SSU]
Length = 326
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +LA L GHEVT+ N + + P + ++ +
Sbjct: 2 KLLII----GGTGFLGRHLASLALDWGHEVTLF-----NRGRRQHPDWRELTQLQGDRDQ 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D + G +D+ +D + ++ A ++ +FIS+ +Y+
Sbjct: 53 ----DLTPLHRHQDG--WDLAIDTCCYRPEQAASLSA-ALLGRCERLIFISTISVYRDFA 105
Query: 196 EPPH---------VEGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
+P EG++ + D G ++V Y + RP + G +
Sbjct: 106 QPGQDESAPLHEIAEGELPE-DYGPLKVLCEATYRARWGERLCVLRPGVLCGPHDPTGRL 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ R P +PG G VRD + + A E S IFNLV
Sbjct: 165 AWWVTRVQRGGPWLLPGQGEDRLQYLDVRDCAEFVLRAAEQ---QLSGIFNLVKPGIALS 221
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK----AAGIDAKKAFP 337
D + +L A+ A + + P AAG++ +++P
Sbjct: 222 DWVDRLAARLAPATPILPEWAPWPALLAAGVEPWQSYP 259
>gi|183983025|ref|YP_001851316.1| hypothetical protein MMAR_3024 [Mycobacterium marinum M]
gi|183176351|gb|ACC41461.1| conserved membrane protein [Mycobacterium marinum M]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G V+G LA LL GHEV M+ R + + V GD +
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMS--------------RRRPDSWPSQADFVAGDIRD 51
Query: 144 VGNVVGGVT-FDVVLDN--------NGK-----NLDAVRPVADWAKSSGVKQFLFISSAG 189
V +T DVV +G+ N+D R V D + G + +F SS
Sbjct: 52 AAAVRRAITGADVVAHCAWARNPGPDGRISQQINIDGTRNVLDAMAACGTGRIVFPSSPH 111
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
+Y+P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 112 VYRPGVPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNW 167
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 168 V--RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|448432407|ref|ZP_21585543.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
gi|445687291|gb|ELZ39583.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
Length = 330
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 37/258 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL +EV I G + PF + + G D +
Sbjct: 9 GGTRFIGRHTVDELLAHDYEVAIFNRG------THENPFAADDRVTHVEGDR--KDDTAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D A +P A + + V +++ISS Y A+E P E
Sbjct: 61 RAAKLSVEPDVVIDCV-----AYQPADVEAATEIFADVDGYVYISSGSSYA-AEEIPKRE 114
Query: 202 GDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKDCE 243
G+ Q E + N + RP + G + +
Sbjct: 115 GETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAEEGVAAMAVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ + +PG G + A+V D++S L + E E ++ +N+ RA+TL
Sbjct: 175 DYWIDRVLTHDRLVVPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRALTL 232
Query: 304 DGMAKLCAQAAGLPVEIV 321
+ A AA + EIV
Sbjct: 233 RETLETVADAAEVDCEIV 250
>gi|374293701|ref|YP_005040724.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
gi|357427104|emb|CBS90042.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
Length = 314
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 108/290 (37%), Gaps = 60/290 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-----------------TVGD-ENSDKMKKPPFNR 125
+GG IG +LA LL GH VTI+ VGD + D +++
Sbjct: 7 TGGCGFIGSHLADRLLADGHRVTILDNLSSGRLDNKPEAANLVVGDVADPDAVREAMAGD 66
Query: 126 FNEIVSA-----------GGKTVWGDPAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADW 173
E V + +W + N++G VT F+ D
Sbjct: 67 HGEGVDGVFHLAAVASVQKSQELWAETHRT-NLLGTVTVFEAARD--------------- 110
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------DAGHVQVEKYISENFSNWAS 227
AK G ++ SSA IY P E ++ +P D ++ I+ + +
Sbjct: 111 AKRGGPIPVVYASSAAIYGDNTNTPLKEDELPRPLSAYGVDKLGCEMHARIAWSIQGVPT 170
Query: 228 FRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
++ G +D F R+ R V I G G Q + V D+ +L L
Sbjct: 171 VGFRFFNVYGPRQDPMSPYSGVISIFARRVARGEDVEIHGDGQQVRDFVFVGDVVRILAL 230
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
A+E A + ++NL + RA +L + + + G V H +P+A I
Sbjct: 231 AMER-RFAGAQVYNLCTGRATSLVMLLDVLQELCGSNVRRRHSEPRAGDI 279
>gi|443490926|ref|YP_007369073.1| conserved membrane protein [Mycobacterium liflandii 128FXT]
gi|442583423|gb|AGC62566.1| conserved membrane protein [Mycobacterium liflandii 128FXT]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G V+G LA LL GHEV M+ R + + V GD +
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMS--------------RRRPDSWPSQADFVAGDIRD 51
Query: 144 VGNVVGGVT-FDVVLDN--------NGK-----NLDAVRPVADWAKSSGVKQFLFISSAG 189
V +T DVV +G+ N+D R V D + G + +F SS
Sbjct: 52 AAAVRRAITGADVVAHCAWARNPGPDGRISQQINIDGTRNVLDAMAACGTGRIVFPSSPH 111
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
+Y+P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 112 VYRPGLPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNW 167
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 168 V--RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|284048368|ref|YP_003398707.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
gi|283952589|gb|ADB47392.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
Length = 305
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + V + + SGV+Q +F SSA IY P +E +V P + + + K + E++
Sbjct: 94 NVTGLVHVLEGCRKSGVEQIIFSSSAAIYGDNQNLPLLETEVPAPTSFY-GLSKAVGEDY 152
Query: 223 SNWAS---------FRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIA 269
S FR + G + E F +I RK PV + G G Q +
Sbjct: 153 IRLYSRCFGLKHIIFRFANVYGERQGETGEGGVISVFARKIARKEPVTVFGDGNQTRDFV 212
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
+ D++ ++L V A+ N+ ++ V+L+ + + G ++ VHY P
Sbjct: 213 YAGDIARAMSLGVGYAGCAT---LNVSTNEEVSLNQLIGTMEKILGHKMD-VHYGP 264
>gi|424855428|ref|ZP_18279729.1| hypothetical protein OPAG_06581 [Rhodococcus opacus PD630]
gi|356663180|gb|EHI43306.1| hypothetical protein OPAG_06581 [Rhodococcus opacus PD630]
Length = 326
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 54/291 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL++ GG +G + LL +GHEVT+ G D + +
Sbjct: 2 KVLVM----GGTRFVGVLAVQRLLDAGHEVTVFHRGSRQPDW-------------TGNVR 44
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+V GD A++ + G FD VLD + D + A V +++ S+ + +
Sbjct: 45 SVLGDRNNSADLARLAEG-RFDTVLDLSAYTGDQTESLL--AALPDVGRWVHCSTVNVVR 101
Query: 193 PA---------DEPPHVEGDVVKPDAGHVQVEKYISENF-------SNWASFRPQYMIGS 236
P+ D PH P G+ ++K E ++ R ++G
Sbjct: 102 PSPVLPWPEEIDYGPH-------PLWGNYAIDKIACERAIQNSRAGAHSVIVRLPLVLGP 154
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N EE+ +RI+ + +PG G + + L AV+ P +++N+
Sbjct: 155 LNFIPREEFVLNRILDGAQILLPGDGQAVHQYIYRDHAAEALARAVDLP-GEGFDVYNVA 213
Query: 297 SDRAVT-LDGMAKLCAQAAGLPVEIVHYDPKAAGID------AKKAFPFRN 340
S R T L+G +CA+ G P + G D A FPF N
Sbjct: 214 SKRCNTSLEGFVDVCAEVLGRPADTRTVGGGPTGEDRATFNNADCVFPFSN 264
>gi|261417133|ref|YP_003250816.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373589|gb|ACX76334.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 288
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG V+G L +EL+ G V ++T+ GD + + R+ ++ ++ G
Sbjct: 6 TGGAGVVGKALCRELIARGVCVRVLTLPGDSLAKSLPSEVDVRYGDVTDF--DSIRGAFE 63
Query: 143 EVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
V +VV + ++ G N D R V + +K +GV++FL++SS + P P
Sbjct: 64 NV-DVVYHLAAILLSTKRGAFEHVNTDGTRNVLEASKLAGVRRFLYVSSISVTYPILTP- 121
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP- 257
G+ K + E + + +W RP +IG G E F V++ PV
Sbjct: 122 --YGESKK------KGESLVHASGLDWTIVRPTLVIGDGGG--VEFNMFRDYVKRFPVYF 171
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+PG G DL + +A P A + L +T+ MAK AG+
Sbjct: 172 MPGGGKCLKRPVRSVDLVKGIAVAGLMP-CAVGKTYALAGSTVMTMAEMAKHVLTDAGM 229
>gi|217960468|ref|YP_002339030.1| hypothetical protein BCAH187_A3080 [Bacillus cereus AH187]
gi|375284979|ref|YP_005105418.1| hypothetical protein BCN_2885 [Bacillus cereus NC7401]
gi|423352763|ref|ZP_17330390.1| hypothetical protein IAU_00839 [Bacillus cereus IS075]
gi|423568042|ref|ZP_17544289.1| hypothetical protein II7_01265 [Bacillus cereus MSX-A12]
gi|217065944|gb|ACJ80194.1| conserved domain protein [Bacillus cereus AH187]
gi|358353506|dbj|BAL18678.1| conserved domain protein [Bacillus cereus NC7401]
gi|401091105|gb|EJP99249.1| hypothetical protein IAU_00839 [Bacillus cereus IS075]
gi|401211381|gb|EJR18129.1| hypothetical protein II7_01265 [Bacillus cereus MSX-A12]
Length = 340
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENSEISPYEHYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 215 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|374297324|ref|YP_005047515.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
gi|359826818|gb|AEV69591.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
Length = 330
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 40/267 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL V GG VI +++ ++ GHE+ ++ G + E G K
Sbjct: 2 KVLFV----GGTGVISEGVSRRVIEKGHELYLLNRGSRS-------------EFTPKGAK 44
Query: 136 TVWGDPAEV---GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY- 191
+ GD ++ ++ FDVV++ + ++ + ++ Q++FISSA Y
Sbjct: 45 LITGDIRDIDACAKILENYYFDVVVNWITFTPEHLKADIELFRNK-TDQYIFISSASAYQ 103
Query: 192 KP-----ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQY-----MIGS 236
KP E +E + ++ EK + + N F RP + MI +
Sbjct: 104 KPPSHYIITESTPLENPYWQYSRDKIECEKIVLNEYRN-TGFPVTIVRPSFTYGLSMIPA 162
Query: 237 GNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
N W +R+ R + + + G G + H D + + N ++ F++
Sbjct: 163 ALNSWEHPWSLVERMKRGKKIIVHGDGTTLWTMTHNEDFAKGFVGLLGNKKSIGEA-FHI 221
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVH 322
SD +T D + + AAG+ I+H
Sbjct: 222 TSDEVITWDEIYRAIGHAAGVEPNIIH 248
>gi|374998177|ref|YP_004973676.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
gi|357425602|emb|CBS88496.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
Length = 313
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F RI R P+ I G G Q + V+DL LT A++ P + + +FN+ + R T++
Sbjct: 196 FAGRIARGEPITINGDGQQVRDFIFVKDLVRYLTAAMDTPRSGAP-VFNVCTGRPTTVNR 254
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAG 329
+A++ + +G P++ Y P G
Sbjct: 255 LAEVLGELSGRPLD-RRYGPARPG 277
>gi|70732834|ref|YP_262601.1| NAD-dependent epimerase/dehydratase [Pseudomonas protegens Pf-5]
gi|68347133|gb|AAY94739.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
protegens Pf-5]
Length = 309
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIVSAG- 133
+GG IG +LA LL G+ V ++ + G ++ + P +VS
Sbjct: 9 TGGAGFIGSHLADALLAKGYAVRVLDDLSTGKPSNLPLADPRVELIEGNVADASLVSQAM 68
Query: 134 -GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + GVK+ LF SSA +Y
Sbjct: 69 QGCCAVAHLAAVASVQASV--DDPVQTHQSNFIGTLNVCEAMREHGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ D K +K SE++ ++ +R Q+ + G +D
Sbjct: 127 NNGEGQSIDEDTAKAPLTPYASDKLASEHYLDF--YRRQHGLEPAIFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +L A+E P+ + N+
Sbjct: 185 SPYSGVISIFSERAQQGLPITVFGDGEQTRDFVYVGDLVQVLVQAIEAPQLEVGAV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
++A TL M A+ G LP + Y P AG
Sbjct: 244 LNQATTLKQMLAALAEVVGALPP--ISYGPARAG 275
>gi|229139664|ref|ZP_04268234.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26]
gi|228643795|gb|EEL00057.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26]
Length = 359
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 64
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 65 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 115
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 116 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENSEISPYEHYGALKVLCEKEAEEYWPRRV 173
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 174 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 233
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 234 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|254433464|ref|ZP_05046972.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
gi|207089797|gb|EDZ67068.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
Length = 296
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQV 214
N N+ V + A +GV++ +F S+ G PP E + KP A +
Sbjct: 67 NFAVNVHGTLNVMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCG 126
Query: 215 EKYISENFSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 268
E Y ++ F Y S + K F +++ P+ I G G +
Sbjct: 127 EAYCHAFAKSYHLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDY 186
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
HV DL S + A+E P S F+L S R T+ +A + Q AG P +H+
Sbjct: 187 IHVEDLGSGIAAALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHF 240
>gi|118617784|ref|YP_906116.1| hypothetical protein MUL_2265 [Mycobacterium ulcerans Agy99]
gi|118569894|gb|ABL04645.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length = 886
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G V+G LA LL GHEV M+ R + + V GD +
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMS--------------RRRPDSWPSQADFVAGDIRD 51
Query: 144 VGNVVGGVT-FDVVLDN--------NGK-----NLDAVRPVADWAKSSGVKQFLFISSAG 189
V +T DVV +G+ N+D R V D + G + +F SS
Sbjct: 52 AAAVRRAITGADVVAHCAWARNPGPDGRISQQINIDGTRNVLDAMAACGTGRIVFPSSPH 111
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
+Y+P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 112 VYRPGLPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNW 167
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 168 V--RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|423469318|ref|ZP_17446062.1| hypothetical protein IEM_00624 [Bacillus cereus BAG6O-2]
gi|402439536|gb|EJV71538.1| hypothetical protein IEM_00624 [Bacillus cereus BAG6O-2]
Length = 341
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 51/291 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAG 133
K+LI+ GG +G +E L GHEVT+ G N ++++ +R N++ S
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRGTNNEIFPEVEQLIGDRNNDVSSLK 57
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 58 NR----------------KWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKD 100
Query: 194 ADEPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RP 230
P H++ D +++P+ Q++ + S++ + R
Sbjct: 101 WI-PHHIKEDYILQPEPTSDQIKAVENGEISHYEHYGALKVLCEKEAEKYWPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G + D ++ R+ + V +PG + + ++D++S EN +A +
Sbjct: 160 GLLSGVFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
NI + +T++ + C + E V D + ++ K P+ M
Sbjct: 220 NITG--PNDELTMEELLNTCKEVTNSDAEFVWVD--ESFMNENKVQPWTEM 266
>gi|325679491|ref|ZP_08159071.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
gi|324108778|gb|EGC03014.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
Length = 337
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 107/284 (37%), Gaps = 74/284 (26%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L + GG I + K L GHE+ ++ G N E +S K
Sbjct: 2 KILFI----GGTGTISMAITKRLAEEGHELYLLNRGSRN-------------EGLSGNIK 44
Query: 136 TVW---GDPAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSG-VKQFLFISSA 188
+ D + ++ G+ FD V + G + L+ D+ G KQF++ISSA
Sbjct: 45 YITTDINDEEKTAKLLDGLEFDCVGEFIGFVPQQLER-----DYRLFGGRTKQFIYISSA 99
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR-----PQYMIGSGNNK--- 240
Y+ KP G+V E+ EN W R +Y++G +K
Sbjct: 100 SAYQ-------------KPPKGYVITEETPLEN-PYWEYSRNKKACEEYLMGLYRDKGFP 145
Query: 241 ---------------------DCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
D W RI +PV I G G I H D +
Sbjct: 146 VTIVRPSHTYDERSVPLGVHGDGGSWQVVKRIKEGKPVIIHGDGTSLWTITHNSDFAKAY 205
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
V NP+A +F++ SD +V+ + + A+A G+ ++ H
Sbjct: 206 AGLVGNPKAI-GEVFHITSDESVSWNEIYGYIAEALGVQLKAYH 248
>gi|291534641|emb|CBL07753.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
M50/1]
gi|291540659|emb|CBL13770.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
XB6B4]
Length = 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK++I N IG A E +E+T + + D + + + + N
Sbjct: 2 KKMIITGVN----GFIG-RCAMEYFSKDYEITGIDLADRYCEDGAEIHYYQCN------- 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVAD--------WAKSSGVKQF- 182
+ D E+ N+ GV DV+L G N+ A V P+AD + +K F
Sbjct: 50 --MSKDSQELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALKSFE 107
Query: 183 -----LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI--- 234
+F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 108 KRPKIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCV 166
Query: 235 ------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPE 286
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 167 RIFSAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE 226
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + V++ +A++ A G +IV ++
Sbjct: 227 ----EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFN 260
>gi|340344551|ref|ZP_08667683.1| Sugar epimerase-like protein [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519692|gb|EGP93415.1| Sugar epimerase-like protein [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 295
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 45/228 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG LAK+L SG ++TI+T K + PF K + D
Sbjct: 11 TGGTGFIGSRLAKKLHDSGADITILT-----RRKQENTPF-----------KIILDDLTN 54
Query: 144 VGNVVGGVTFDVV--------LDNNGK-----NLDAVRPVADWAKSSGVKQFLFISSAGI 190
N+ FDVV L+ N K N D V+ + ++ SG K +++IS +
Sbjct: 55 -PNLRFEQKFDVVCHLASVTPLEKNKKIIQSVNYDGVKNL--FSAISGAKLYVYISGLAV 111
Query: 191 YKPADE------PPHVEGDVVKPDAGHVQVEKYISENFSNWA-SFRPQYM--IGSGNNKD 241
+ P + P + + +K ++ ++++ EN +F Y+ + GN
Sbjct: 112 FDPKYDKIIETTPKKSDTEFIKT---RIKAQEFLEENCKKSGINFSVAYLGDVVYGNGGF 168
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ DR+ +K IPG+G N HV D+ L ++ E S
Sbjct: 169 FKSMILDRM-QKGTFRIPGNGKYIKNFIHVEDVVGALIAVIQKSETDS 215
>gi|291438346|ref|ZP_06577736.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
gi|291341241|gb|EFE68197.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
Length = 335
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ELL GH V ++ D+ S V G + G D
Sbjct: 2 TGGAGFIGSHVARELLALGHRVVVL---DDLSGGTGAN--------VPDGAEFRHGSVCD 50
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSG-VKQFL 183
P V V D V N N+ + + A ++G VK F+
Sbjct: 51 PEVVDAVFASHRIDYVFHLAAYAAEGLSHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFV 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH------VQVEKYISENFSN--WASFRPQYMIG 235
F SS +Y A++ P E V P+ + V+ E +S + FRP + G
Sbjct: 111 FTSSIAVYG-ANQLPMSEELVPAPEDPYGIAKFSVEQELRVSHEMFGLPYVIFRPHNVYG 169
Query: 236 SGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
N ++ F ++ +R + G G Q +++RD++ + +VE P AA +
Sbjct: 170 EYQNIGDRYRNVIGIFMNQALRGEEFTVFGDGEQTRAFSYIRDVAPAIARSVELP-AAYN 228
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
IFN+ D+ +++ +A +A G+ + + H
Sbjct: 229 EIFNIGGDQVYSVNRIAAAVCEAMGVELRVNH 260
>gi|46446796|ref|YP_008161.1| hypothetical protein pc1162 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400437|emb|CAF23886.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 269
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W DR++R PG+G Q TN+ H+ D+ L A++N IFNL +D +
Sbjct: 162 RWITDRVIRMHQYSFPGTGNQLTNVIHLTDIVRALDFALQNKLHG---IFNLCNDFHIPR 218
Query: 304 DGMAKLCAQAAGLP 317
+ Q+A LP
Sbjct: 219 KLFYEQLLQSAHLP 232
>gi|359417148|ref|ZP_09209355.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
gi|358032473|gb|EHK01171.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
Length = 317
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
DE+ +K+ P F+ AG + +P E +NL + +
Sbjct: 70 DEDLEKLPSNPDKVFHNAAVAGVRNSIENPTEYAK---------------QNLLGLSKLL 114
Query: 172 DWAKSSGVKQFLFISSAGIYK--PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
D +S G +F+F SS+ +Y P DE P E + P A + Q +K+ E ++
Sbjct: 115 DSFESIG--KFMFASSSSVYGMVPEDELPVQEDRELSPIAPYPQSKKHGEEMVRLYSELY 172
Query: 230 P------QYMIGSGNNKDCEE---WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+Y G + +E F ++ PV I G G Q + +V+D++S
Sbjct: 173 DFDYSILRYFTVYGPRQRPDEAFTKFIQMVLNDEPVTIYGDGEQSRDFTYVKDIASG--- 229
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
A++ E S+ +N+ S R +T++ M + + VE H
Sbjct: 230 AIKASEKQGSDTYNIASGRRITVNEMVETLDEVMEENVEKTH 271
>gi|357056438|ref|ZP_09117484.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
gi|355380342|gb|EHG27480.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
Length = 337
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 22/201 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIYK------ 192
D V +V G T+DVV + V D G +Q++FISSA Y+
Sbjct: 50 DEEAVARIVEGRTYDVVAQFIAYGAEDVE--RDIRLFQGRTRQYIFISSASAYQKPMAGC 107
Query: 193 PADEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN-----NKDC 242
P E P+ E K DA V Y F RP + + D
Sbjct: 108 PITESTPLINPYWEYSRKKIDAEEVLTAAYRRNGFPV-TIVRPSHTYDGKKPPVAIHGDK 166
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W RI+ +P+ IPG G + H D + + NP A N +++ SD ++
Sbjct: 167 GNWQILKRILEGKPIIIPGDGTSLWTLTHSTDFARGYVGLMGNPHAI-GNAYHITSDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A+A P+ +H
Sbjct: 226 TWNQIYETLAEALDRPLNALH 246
>gi|355681734|ref|ZP_09062134.1| hypothetical protein HMPREF9469_05171 [Clostridium citroniae
WAL-17108]
gi|354811414|gb|EHE96046.1| hypothetical protein HMPREF9469_05171 [Clostridium citroniae
WAL-17108]
Length = 318
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 38/249 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------DENSDKMKKPPFNRFNEIVSAGGKT 136
+GG IG YL L+ +G+EV +T G DE D + +R +
Sbjct: 6 TGGCGHIGTYLIPMLVRAGYEVINITRGISRPYVEDEAWDYVTPVIMDREKD-------- 57
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
+ + G+ D+V+D +++ + + K + + +LF SS + A+
Sbjct: 58 -----KGFAHKIAGMEPDIVVDLINFHIEDTKATTEALKGTKLSHYLFCSSVWAHGRAEI 112
Query: 197 PPHVEGDVVKP---DAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKD-----CEEW- 245
P D+ K D G Q E Y+ E + A F P +I G W
Sbjct: 113 LPADPADLQKAPLDDYGFNKFQSEIYLREQYHT-AGF-PATIIMPGQISGPGWTIMNPWA 170
Query: 246 -----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F++I + + +P GM+ + H D++ M A+ + A F+ V ++
Sbjct: 171 NKTPVVFEKIAKGEEIFLPNFGMETLHHVHGEDVAQMFFKAITHRNQALGETFHAVGSQS 230
Query: 301 VTLDGMAKL 309
+TL G AKL
Sbjct: 231 ITLYGYAKL 239
>gi|302876696|ref|YP_003845329.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|307687371|ref|ZP_07629817.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|302579553|gb|ADL53565.1| NmrA family protein [Clostridium cellulovorans 743B]
Length = 286
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
+ V P D AK GV Q +FIS GI K P A H ++EKY+ E
Sbjct: 83 EHVFPFIDKAKQMGVLQIIFISILGIDK-------------NPLAQHRRIEKYLKEIEVP 129
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ RP Y + N + I + + IP +G N VRD+++ +
Sbjct: 130 YTIIRPSYFMQKLNT-----MYRHEIKVQGKIMIP-AGKAKINFIDVRDVAAFTARVICE 183
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ I+ + A+T A++ + AG VE V+
Sbjct: 184 ENEHFNMIYKVTGKEAITYHEAAEIFSNTAGKNVEYVN 221
>gi|222479221|ref|YP_002565458.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222452123|gb|ACM56388.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 330
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 31/255 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL + +EV ++ G + PF+ + + G + ++
Sbjct: 9 GGTRFIGRHTVSDLLANSYEVGMLNRG------THENPFSDDDRVTHVEGDR--KNERDL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ D+V+D V D + V +++ISS Y +E P EG+
Sbjct: 61 RTAKLSIEPDIVIDCVAYQPTDVETATD--VFADVDGYVYISSGDSYA-TEEIPKREGET 117
Query: 205 -VKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWF 246
++P A + E Y +E + RP + G + + +++
Sbjct: 118 PLRPCTPEQATDDEPETYGNRKAEGDRAVFAAAEEGVRAMAVRPCIVYGPYDYTERLDYW 177
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR++ + V +PG G + A+V D++S L + E EA ++ +N+ +A+TL
Sbjct: 178 IDRVLSQDHVVVPGDGQNLWHRAYVEDVASGLRIVAERGEAGAA--YNVGDRQALTLAET 235
Query: 307 AKLCAQAAGLPVEIV 321
+ A AAG E+V
Sbjct: 236 LETIADAAGTDCEVV 250
>gi|359800693|ref|ZP_09303232.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
gi|359361394|gb|EHK63152.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
Length = 317
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 32/274 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELHRRGYN-NVLTRSRTELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ T V D KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANNTHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 --------------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFD 248
+ AG E Y E + + P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREFGARFICAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A I+N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVTIWGTGAPLREFLYVDDLAQGCVMLMEHPDA--EGIYNIGAGK 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A+L A+ G IV+ K G K
Sbjct: 243 DISIADLAQLVARVVGYRGNIVYDTSKPDGTPRK 276
>gi|448728450|ref|ZP_21710778.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
gi|445796932|gb|EMA47417.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
Length = 338
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 43/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--------KMKKPPFNRFNEIVSAGGKT 136
GG +I + ++L+ +GH+VT+ G ++D + ++RF E ++
Sbjct: 7 GGTGLISTGITRQLVDAGHDVTVYNRGRTDADLPPGVAHVTGDRTDYDRFEEQMA----- 61
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPAD 195
+V V+ V F+ A+R A ++Q++F S+ +Y +P
Sbjct: 62 ----DLDVDCVIDMVAFE-----PADIESAIR-----AFEGEIEQYVFCSTIDVYHRPVV 107
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISEN--FSNWAS-------FRPQYMIGSG----NNKDC 242
+ P VE P +K EN F + RP + G G +
Sbjct: 108 DMPIVESAARSPAVSEYGADKAACENRLFEAHSDREFPATVLRPWHTYGEGGTLIHTLGD 167
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+ DR+ +P+ + G G H D++S A++NP AA +++ +R +T
Sbjct: 168 GTAYIDRLREGKPLVVHGDGTSIWGPCHRDDIASAFVGALDNP-AAIGETYHVTCERPMT 226
Query: 303 LDGMAKLCAQAAGLPV-EIVH 322
+ + A A P ++VH
Sbjct: 227 WNQYHRRAADALDAPDPDLVH 247
>gi|55377093|ref|YP_134943.1| hypothetical protein rrnAC0171 [Haloarcula marismortui ATCC 43049]
gi|55229818|gb|AAV45237.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 359
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 40/277 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G ++ PF E+ G D E
Sbjct: 40 GGGRFIGRHTVTEFRDAGYDVTMLTRG------RRQNPFTN-AEVAHIEGDRRERDTLET 92
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D G +++ISS Y A+ P EG+
Sbjct: 93 ARER--VNPDVVVDCVAYFPEDVRVATDVFADVGA--YVYISSGAAYG-AERTPKREGET 147
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 148 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVQAMSVRPTVVYGPYDYTERFA 205
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ V +P G+ +A+V D++S L L E A + +N+ + A TL
Sbjct: 206 YWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA--YNVGDEHAPTLR 263
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPF 338
L A+ VE + + +AAG+ A FP
Sbjct: 264 EWVDLLARVHETDVETIGVGERELRAAGL-APDDFPI 299
>gi|56476479|ref|YP_158068.1| sugar dehydratase [Aromatoleum aromaticum EbN1]
gi|56312522|emb|CAI07167.1| Sugar dehydratase [Aromatoleum aromaticum EbN1]
Length = 315
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 179 VKQFLFISSAGIY-----KPADE-PPHVEGDVVKPDAGHVQ---VEKYISENFSNWAS-- 227
V+Q+L IS+ +Y +P DE P ++G +P+ G +K ++E +
Sbjct: 92 VRQYLLISTTTVYQQSAGRPVDENAPLLDGP--QPELGDYADYGYDKCLAERAARRECER 149
Query: 228 -------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
RP + G N E +FFDR+ + PV IP N V D++ +L
Sbjct: 150 LGIALTVLRPAIIYGYYNYAPRETYFFDRLRNREPVVIPEPARSSFNFIWVVDMAHLLWR 209
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+ +P FNL S AVT + + + G +E +
Sbjct: 210 CIGDPRVFGET-FNLASGEAVTHARIVEALGEIVGKTIETL 249
>gi|448495643|ref|ZP_21610088.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
gi|445687736|gb|ELZ40011.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
Length = 330
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 100/260 (38%), Gaps = 41/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-EN----SDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV + G+ EN D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAMFNRGNHENPFAGDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V + D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDIVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDAQATDDTHETYGNRKAEGDRAVFAAAEAGVSAMAVRPCIVYGPYDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ + V +PG G + A+V D++S L E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTQDRVVVPGDGQNLWHRAYVEDVASALRAVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
TL + A A + E+V
Sbjct: 231 TLRETLETIADVADVDCEVV 250
>gi|399007072|ref|ZP_10709588.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
gi|398121029|gb|EJM10672.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
Length = 310
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VL+ +GG IG +L LL G+ V ++ D ++ K+ P + A
Sbjct: 4 KRVLV----TGGAGFIGSHLVDALLARGYAVRVLD--DLSTGKVSNLPMD------CAAL 51
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLD--------------NNGKNLDAVRPVADWAKSS 177
K V GD A+ + + G + V L + N V + ++
Sbjct: 52 KLVVGDVADAATLTEAMQGCSAVVHLAAVASVHASVEHPAATHRSNFIGTLRVCEAMIAA 111
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS- 236
G+++ +F SSA +Y E ++ D +K SE++ N+ +R Q+ +
Sbjct: 112 GIRRVVFASSAAVYGNNGEGTPIDEDTPTSPLTPYAADKLSSEHYLNF--YRRQHGLEPV 169
Query: 237 --------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
G +D F +R RP+ + G G Q + +V DL +L
Sbjct: 170 ILRFFNIFGPRQDPLSPYSGVISIFSERAKTGRPIVVFGDGEQTRDFVYVEDLVKILLQG 229
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+E+P+ A ++ N+ TL+ + + +G P+ + H ++ I KA
Sbjct: 230 LEHPQPA-ADATNVGLGGVTTLNDLITALERISGKPLSVSHAAARSGDIRHSKA 282
>gi|297623712|ref|YP_003705146.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
gi|297164892|gb|ADI14603.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
Length = 333
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPV---ADWAK-SSGVKQFLFISSAGIYK--- 192
DPA V +GG+ F V + N A P AD A +Q++FISSA Y+
Sbjct: 52 DPASVEAALGGLGFRVF--DAVVNWIAFTPEHLEADLALFRDRTRQYVFISSASAYQTPP 109
Query: 193 ---PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD- 248
P E + + G + E+ +++ + + F P ++ + D FD
Sbjct: 110 QRLPITESTPLRNPYWRYAQGKIACEERLTQAYRD-EGF-PMTIVRPSHTYDRTLLPFDG 167
Query: 249 ------RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
R+ R V + G G + H RD + + NP+A F++ SD +T
Sbjct: 168 GYTVLDRMRRGAKVIVHGDGTSLWTLTHHRDFALGFVGLLGNPQALG-EAFHITSDEVLT 226
Query: 303 LDGMAKLCAQAAGLPVEIVH 322
+ + L A+AAG +VH
Sbjct: 227 WNQIVDLVARAAGTEARVVH 246
>gi|384100776|ref|ZP_10001833.1| UDP-glucose 4-epimerase [Rhodococcus imtechensis RKJ300]
gi|383841682|gb|EID80959.1| UDP-glucose 4-epimerase [Rhodococcus imtechensis RKJ300]
Length = 330
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + + G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VVSDLLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 282
>gi|229588039|ref|YP_002870158.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens SBW25]
gi|229359905|emb|CAY46759.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens SBW25]
Length = 308
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS 131
K+VLI +GG IG +L LL G+ V ++ + G ++ + P V+
Sbjct: 3 KQVLI----TGGAGFIGSHLVDALLAKGYGVRVLDNLSTGKRSNLPLHDPRVELLEGDVA 58
Query: 132 --------AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
A G T A V +V V D + + N V + + +GVK+ +
Sbjct: 59 DADLVARAAVGATAVVHLAAVASVQASV--DDPVSTHQSNFVGTLNVCEAMRKAGVKRVV 116
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS------- 236
+ SSA +Y E ++ + K +K SE++ ++ +R Q+ +
Sbjct: 117 YASSAAVYGNNGEGASIDEETTKAPLTPYASDKLASEHYFDF--YRRQHGLEPVIFRFFN 174
Query: 237 --GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
G +D F +R+ + P+ + G G Q + +V DL +L A+E P A
Sbjct: 175 IFGPRQDPSSPYSGVISIFSERVQQGVPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAP-A 233
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
A N+ +R TL + + + G LP + Y P +G
Sbjct: 234 APLGAINVGWNRTTTLKQVLQALEEVVGTLPT--ITYGPARSG 274
>gi|387784397|ref|YP_006070480.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
gi|338745279|emb|CCB95645.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
Length = 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 63/301 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-----------------TIMTVGDENSDK 117
KKVL+ +G +G Y+ +EL+ G++V GD + +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELVDHGYQVRAFGRNHTIGQSLVNASVTFVQGDLTNQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ ++ AG TVWG P E D N+ + V + +
Sbjct: 58 DLTKACQEMDMVIHAGALSTVWG-PWE--------------DFYRTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+ +K+ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 103 ANIKRLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLFKDYPDVS 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA
Sbjct: 159 SVILRPRGLFGIGDTS-----ILPRVLNLSQKIGIPLIGDGRQLMDMTCVENVALAIRLA 213
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRN 340
+E P+AA ++N+ + + + + G P+ P + I + F ++N
Sbjct: 214 LETPQAAGE-VYNITNGEPRVFRDLIEETLRGLGYPIRYRKIPAPLVSAISSSLEFIYKN 272
Query: 341 M 341
+
Sbjct: 273 L 273
>gi|423202412|ref|ZP_17188991.1| hypothetical protein HMPREF1167_02574 [Aeromonas veronii AER39]
gi|404614608|gb|EKB11587.1| hypothetical protein HMPREF1167_02574 [Aeromonas veronii AER39]
Length = 332
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-- 193
++ A G G+ +D+V+D + ++ A + +FIS+ +Y+
Sbjct: 53 SL---SALQG---AGLQWDLVIDTCCYRPEQAASLSA-ALLGRCARLIFISTISVYRDFS 105
Query: 194 ---ADE--PPHV--EGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
DE P H EG++ D G ++V ++Y + RP + G +
Sbjct: 106 MPGMDESAPLHAIPEGEM-PTDYGPLKVLCEQEYRARWGERLCILRPGVLCGPHDPTGRM 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ + P +PGSG VRD + A E + FNL+
Sbjct: 165 AWWIKRVQQGGPWLLPGSGEDRLQYLDVRDCVEFVLRAAEQQLGGT---FNLLKPGITLC 221
Query: 304 DGMAKLCAQAAG----LPVEIVHYDPKAAGIDAKKAFP 337
D + +L A+ LP + AAGI+ +++P
Sbjct: 222 DWLERLSARLQPARPILPEWLPWSTLMAAGIEPWQSYP 259
>gi|392402383|ref|YP_006438995.1| NmrA family protein [Turneriella parva DSM 21527]
gi|390610337|gb|AFM11489.1| NmrA family protein [Turneriella parva DSM 21527]
Length = 288
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 52/250 (20%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFN----RFN-EI 129
KVLI +G +G + K L G HE+ I+ V D+ + + P N RF+ E
Sbjct: 3 KVLI----TGATGNVGLEVLKALSGIKHELQIIAGVRDQQTGATQLPGHNIQIARFDFEN 58
Query: 130 VSAGGKTVWG-------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
V++ G + G P ++ +V +P+ K++GVK
Sbjct: 59 VNSFGSALQGCDILFLLRPPQISDVK----------------TYFKPLIRECKAAGVKHI 102
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+F+S G+ K P H ++EK I E+ RP Y + ++
Sbjct: 103 VFLSVQGVEKSRIIPHH-------------KIEKLIVESQIAHTFLRPAYFM-----QNF 144
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
D IV+KR V +P +FT I V D+ + + N A + ++L +D +
Sbjct: 145 TTTLRDDIVKKRRVYLPAGDAKFTLI-DVADIGRVAAAILANSTAHINKAYDLTNDEKLN 203
Query: 303 LDGMAKLCAQ 312
M + ++
Sbjct: 204 FREMTDILSR 213
>gi|121534554|ref|ZP_01666376.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
gi|121306806|gb|EAX47726.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
Length = 306
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGH----VQVEKY 217
N+ + V + +SSGVK+ +F SSA +Y PAD P E D +P + + + EKY
Sbjct: 92 NIMGLVNVLEACRSSGVKRIVFASSAAVYGDPADLPLSEEAD-KQPTSFYGLSKLVAEKY 150
Query: 218 ISENFSN----WASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ + N + + R + G E F + + P+ + G G Q +
Sbjct: 151 LELYYKNFGLEYVALRYANVYGERQTDSGEGGVISIFLTKALVDEPLTVFGDGTQTRDFI 210
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+VRD++ A+ A S +N+ + + ++++ + L Q P+ I Y P AG
Sbjct: 211 YVRDVAEANYRALFTANANRS--YNISTGQEISVNELIGLMQQLVEKPL-ITQYAPPRAG 267
>gi|218884406|ref|YP_002428788.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
gi|218766022|gb|ACL11421.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
Length = 307
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L +L+ G++ ++ G PF I G + +
Sbjct: 6 TGGGGFIGRFLVSDLVKKGYDAIVVDRGPS--------PFVEHQRIKYYVGDVT--NVIQ 55
Query: 144 VGNVVGGVTFDVV---------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+ N++ DVV L N++A + + + + + G+K+F+F+SSA
Sbjct: 56 INNIMAKHKPDVVIHLAALLADTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSA 115
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSGNN 239
+Y P P E D KP + V KY E +W + RP + G G
Sbjct: 116 SVYHPDTPEPVREEDAGKP-VSYYGVTKYAGELIGSWYYRKGLIDFRALRPTVVFGPGRF 174
Query: 240 K----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+ + +R + V + + N +VRD+ S+L L E
Sbjct: 175 RGPSAEYSSMIIERALNNEKVIVKNPNDK-VNYIYVRDVVSVLILLAE 221
>gi|411008519|ref|ZP_11384848.1| isoflavone reductase [Aeromonas aquariorum AAK1]
Length = 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + + P + +++ +
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGRRQHPDWRELSQLQGDRDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D + G ++D+ +D + ++ A ++ +FIS+ +Y+
Sbjct: 53 ----DLTPLHRYQG--SWDLAIDTCCYRPEQAASLSA-ALLGRCERLIFISTISVYRDFA 105
Query: 196 EPPH---------VEGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
+P EG++ + D G ++V Y++ RP + G +
Sbjct: 106 QPGQDESAPLHEMAEGELPE-DYGPLKVLCEATYLARWGERLCVLRPGVLCGPHDPTGRL 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ + P +PG G VRD + + A E S IFNLV
Sbjct: 165 AWWVKRVQQGGPWLLPGQGEDRLQYLDVRDCAEFVLRAAEQ---QLSGIFNLVKPGIALS 221
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK----AAGIDAKKAFP 337
D + +L A+ + + P AAG++ +++P
Sbjct: 222 DWVDRLAARLTPATPIVPEWAPWPALLAAGVEPWQSYP 259
>gi|398845160|ref|ZP_10602203.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM84]
gi|398253814|gb|EJN38928.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM84]
Length = 310
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 34/260 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN---------EIVS 131
+GG IG +L LL G+ V ++ + G ++ ++ P E +
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRVLDDLSTGKRDNLQLGNPRLELIEGDVADAELVERAA 68
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG K V A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCKAVV-HLAAVASVQASVEDPV--KTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVY 125
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 126 GNNGEGQSIAEDTPKAPLTPYAVDKLASEQYLDF--YRRQHDLEPVVFRFFNIFGPRQDP 183
Query: 242 ------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
F +R + P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 184 SSPYSGVISIFSERATQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NI 242
Query: 296 VSDRAVTLDGMAKLCAQAAG 315
++A +L+ + K Q G
Sbjct: 243 GLNQATSLNQLLKALEQVVG 262
>gi|229145638|ref|ZP_04274021.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24]
gi|228637884|gb|EEK94331.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24]
Length = 364
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G L +E L GHEVTI G K F +++
Sbjct: 21 KILIL----GGTRFLGRALVEEALKRGHEVTIFNRG------TNKEIFPEVEQLI----- 65
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R + D K + +K ++FISS +YK D
Sbjct: 66 ---GDRNNDVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLSVYK--D 119
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 120 WIPHDIKEDYILQPEPTEEQIKGVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 179
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ RI + V +PG + I ++D++ EN +A
Sbjct: 180 LLSGMFDYTDRLPYWIGRIAKGGEVLVPGRKDRPVQIVDIKDVAYFGLNMAENNKAG--- 236
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + +T++ + C + E V D
Sbjct: 237 IFNVTGPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|385763939|gb|AFI78762.1| NAD-dependent epimerase/dehydratase [uncultured bacterium ws198A12]
Length = 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 24/256 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDP 141
+G + IG +L L G +V + N D +K P E I +A + D
Sbjct: 7 TGANGFIGRHLTTAQLALGRQVVAVDQKVTNLDDIKHDPMLTIFETDIRNADAMSDAIDG 66
Query: 142 AEVGNVVGGVTFDVVLDNN---GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
A + + +V D + N+DA+ + A+++ V++F+ S+ G+Y P D P
Sbjct: 67 ANIVFHLAAAHLEVTADESHYRAINVDALARLLQLAEAAAVERFVHCSTVGVYGPIDSLP 126
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIGSGNNKDCEEWFFDR 249
E +PD + + K E+ A+ RP ++ G G + +
Sbjct: 127 ADETTACRPDIAY-EKTKLDGEDLVRKAAGAGGLSTVIIRPSWVYGPGCPRTLK--LLRS 183
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
I RK+ + GS + ++ DL +P S F + +A+++ G+ +
Sbjct: 184 IARKKFFFV-GSANNMRHPLYIDDLLQAFERVATHPITPGST-FIIAGPQAISVRGLVQE 241
Query: 310 CAQAAGLPVEIVHYDP 325
++ G V Y+P
Sbjct: 242 ASKVLG-----VQYNP 252
>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like
[Glycine max]
Length = 349
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 47/213 (22%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKK---------------- 75
+ SS+S LS S PS F C +SR++ ++ T+ SA+ K
Sbjct: 18 TLSSHSQLSP--SPQPSQFKPCTVASRQNLCTSNTLSVSASRKNSTSPIFLATASGKSEP 75
Query: 76 -----KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
VLI + G IG+ LAKE L +G V I + DE + N V
Sbjct: 76 MLPPFNVLITGSTKG----IGYALAKEFLKAGDNVLICSRSDERVKTAVQ------NLRV 125
Query: 131 SAGGKTVWGDPAEVGN---VVGGVTF--------DVVLDNNGKNLDAVRPVADWAKSSGV 179
G + VWG +V N V V+F D+ ++N G N + +P+ + A +
Sbjct: 126 EFGEQHVWGTKCDVKNAEDVKNLVSFAQEKMKYIDIWINNAGSNAYSYKPLVE-ASDEDL 184
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 212
+ + ++ G+ E ++ V +P GH+
Sbjct: 185 IEVVTTNTLGLMICCREA--IKMMVNQPRGGHI 215
>gi|312200682|ref|YP_004020743.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
gi|311232018|gb|ADP84873.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
Length = 377
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 106/271 (39%), Gaps = 32/271 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ LL +GHEV + + +D ++ + G D
Sbjct: 6 TGGSGFIGAHVVDRLLDAGHEVRALDLAVNGADTRADHRVVDVLDLEAVAGAFDGCDA-- 63
Query: 144 VGNVVGGVTFDVVL-DNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKP---ADE 196
V ++ G D+ D G N++ V + A+ +GV++ LF S+ +Y AD
Sbjct: 64 VFHIAGMSNVDLAFADPVGTVRLNVEGTGNVCEAARRTGVRRVLFASTVWVYGAVPDADG 123
Query: 197 PPHVE---GDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI-----------G 235
P V G+ + D AGH+ ++ S+R Y + G
Sbjct: 124 RPEVGAAGGESLTEDSVIELGRAGHIYTSTKLAAELL-LHSYRETYGLPFTILRYGIPYG 182
Query: 236 SGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G + F R V P+ + G G QF +VRDL+ A+ P A + I
Sbjct: 183 PGMRDELVLARFVARAVAGEPLTVAGDGRQFRRYVYVRDLADAHVRALTAPAAENETIAL 242
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
++R LD + A G+ +E V P
Sbjct: 243 EGAERISVLDMAEAVRAHFPGVEIEHVPARP 273
>gi|384181086|ref|YP_005566848.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|324327170|gb|ADY22430.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KYI+E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYIAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFVHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|228908803|ref|ZP_04072635.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
gi|228850813|gb|EEM95635.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
Length = 341
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + KE L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAVVKEALNRGHEVTLFNRG------TNKEVFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD ++ + + +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRSDDVSSLENRKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPMEEQIKAVENGEISPYEHYGALKVLCEKEADKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + ++D++S EN +A + N
Sbjct: 161 LLSGMFDYTDRLTYWIQRVAKGGKVLVPGRKNRPVQFVDIKDVASFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNYELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|443468808|ref|ZP_21059015.1| UDP-glucose 4-epimerase [Pseudomonas pseudoalcaligenes KF707]
gi|442898027|gb|ELS24844.1| UDP-glucose 4-epimerase [Pseudomonas pseudoalcaligenes KF707]
Length = 309
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------- 131
+GG IG +LA LL GH V ++ + G ++ + P V+
Sbjct: 9 TGGAGFIGSHLADALLARGHAVRVLDNLSTGKRDNLALDNPRLELIEGDVADAALVARAM 68
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG K V A V +V V D + + N V + + GVK+ LF SSA +Y
Sbjct: 69 AGCKGV-AHLAAVASVQASV--DDPVATHQSNFIGTLNVCEAMRQQGVKRVLFASSAAVY 125
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD- 241
E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 126 GQNGEGRAIDEDTPKSPLTPYAVDKLASEQYLDF--YRRQHGLEPAVFRFFNIFGPRQDP 183
Query: 242 ------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
F +R + P+ + G G Q + +V DL +L A+E + N+
Sbjct: 184 SSPYSGVISIFTERALAGTPITVFGDGEQTRDFVYVGDLVQVLVQALEQ-DWLEVGAVNV 242
Query: 296 VSDRAVTL-DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
++A +L + +A + GLP I H + +A I +A
Sbjct: 243 GLNQATSLKELLAAIGDVLGGLP-PITHAEARAGDIRHSRA 282
>gi|448475818|ref|ZP_21603173.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445816036|gb|EMA65945.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 338
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLI+ GG +I +A++L+ +GHEV T G ++D P RF G +
Sbjct: 2 RVLII----GGTGLISTGIARQLVAAGHEVVAFTRGTTDADV---PEAVRFRH----GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--P 193
+ D + V V D V+D + R D A + Q++F S+ +Y+ P
Sbjct: 51 SRRED---LDRVAAEVDPDCVIDMVCFGPETARDAVD-AFAGVADQYVFCSTVDVYRRPP 106
Query: 194 ADEP-----PHVEGDVVKPDAGHVQVEKYISENFSN-------------WASFRPQ---- 231
AD+P P P + + + + F + W+++ +
Sbjct: 107 ADQPITESAPRESETDAAPVSDYAADKAAAEDVFFDAHGDAFATTVIRPWSTYGDRGPVL 166
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ +GSG ++ DRI +PV + G G H D++ AV N +A
Sbjct: 167 HTLGSGT------YYLDRIREGKPVIVHGDGTALWGPCHRDDVAGAFVGAVGNA-SAHGE 219
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
+++ S +T + + A A P E+VH
Sbjct: 220 AYHVTSGEPMTWNQYHRRVASALDAPEPELVH 251
>gi|299068339|emb|CBJ39563.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CMR15]
Length = 334
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ ++++
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTDSG 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G D F R+ R P VP+ + +F + +V D++ A
Sbjct: 163 LDWTVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAVAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|229191135|ref|ZP_04318124.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
gi|228592285|gb|EEK50115.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
Length = 341
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 110/273 (40%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVTI G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTIFNRGTNNE---------IFPEVEHLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 49 RN-GDVSSLKN----RTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWID 251
>gi|30263172|ref|NP_845549.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47528537|ref|YP_019886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. 'Ames Ancestor']
gi|49186021|ref|YP_029273.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. Sterne]
gi|65320500|ref|ZP_00393459.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|165868985|ref|ZP_02213645.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167632587|ref|ZP_02390914.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|167637345|ref|ZP_02395625.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|170684995|ref|ZP_02876220.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|170705185|ref|ZP_02895650.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|177650008|ref|ZP_02933009.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564869|ref|ZP_03017790.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227813963|ref|YP_002813972.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229604184|ref|YP_002867437.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|254685779|ref|ZP_05149638.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CNEVA-9066]
gi|254723186|ref|ZP_05184974.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A1055]
gi|254738249|ref|ZP_05195952.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Western North America USA6153]
gi|254742583|ref|ZP_05200268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Kruger B]
gi|254752564|ref|ZP_05204600.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Vollum]
gi|254761080|ref|ZP_05213104.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Australia 94]
gi|386736967|ref|YP_006210148.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|421510197|ref|ZP_15957094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|421636826|ref|ZP_16077424.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
gi|30257806|gb|AAP27035.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47503685|gb|AAT32361.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49179948|gb|AAT55324.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Sterne]
gi|164715711|gb|EDR21228.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167514852|gb|EDR90218.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|167532885|gb|EDR95521.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|170130040|gb|EDS98902.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|170671255|gb|EDT21993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|172083960|gb|EDT69019.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564186|gb|EDV18150.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227006746|gb|ACP16489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229268592|gb|ACQ50229.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|384386819|gb|AFH84480.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|401819787|gb|EJT18960.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|403395622|gb|EJY92860.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
Length = 328
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 6 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 65
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 66 DYIFHSGAHSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 111 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 170
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 171 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 228
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 229 TNDERINL 236
>gi|402772644|ref|YP_006592181.1| NAD dependent epimerase/dehydratase family protein [Methylocystis
sp. SC2]
gi|401774664|emb|CCJ07530.1| NAD dependent epimerase/dehydratase family protein [Methylocystis
sp. SC2]
Length = 337
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG G L +LL SG++VT+ V D + P + N V G D A+
Sbjct: 11 TGGAGYCGSRLVPQLLRSGYKVTVYDVMYFGCDFL---PKDDPNLTVIQGD---IRDQAK 64
Query: 144 VGNVVGG---------VTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISSAG 189
+ V G ++ D + + + NL+A P+ AK++GVK+F++ SS+
Sbjct: 65 LAAAVAGHDAFLSLACISNDASFELDERLSTSVNLEAFEPMVLTAKNAGVKRFIYASSSS 124
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKD 241
+Y +D+P E + P + + + K+I + F+ +FRP + G +
Sbjct: 125 VYGVSDQPEVTEDHPLVPLTLYNKYKGMCEPLLNKHIDDGFTG-VTFRPATVCGYAPRQR 183
Query: 242 CE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNL 295
+ + V K + + G G Q HV+D + + ++ P E IFN+
Sbjct: 184 LDLSVNILTNHAVNKNRITVFG-GSQLRPNLHVQDYVDAVEMFLQAPAEKIQGEIFNV 240
>gi|406908349|gb|EKD48880.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 354
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK--PPFNRFNEIV 130
+ K VL+ +GG IG ++ ++L+ G VTI+ D+ S K PFN ++
Sbjct: 39 KNKPVLV----TGGCGFIGSHIVEQLVACGARVTII---DDLSTGFKDNIAPFNNSVTLI 91
Query: 131 SAGGKTVWGDPAEVGNVVGG--VTFDVV--------LDN----NGKNLDAVRPVADWAKS 176
DPA V G + F + ++N + N+D + + A++
Sbjct: 92 QKN----ITDPAACEQAVAGNEIIFHLAAFTSVPGSVENPALCHSINVDGIFNLLHAARN 147
Query: 177 SGVKQFLFISSAGIYKP-ADEPPHVEGDV--VKPDAGHVQVEKYISENFS---NWASFRP 230
GV++F+F S++ +Y P D + D+ V P + + + FS N
Sbjct: 148 HGVQRFVFSSTSSVYGPREDVCRETDADLQPVSPYGATKLMGELYCKQFSLLFNVPCVML 207
Query: 231 QY--MIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+Y + G N D F R+ R P+ I G G Q + HV +++ +A
Sbjct: 208 RYFNVYGPRQNPDSHYAAAVAKFKQRMERNEPLTIFGDGTQTRDFVHVHEVAHANLIAGM 267
Query: 284 NPEAASSN-IFNLVSDRAVTLDGMA 307
P+ N I+N+ + R++++ +A
Sbjct: 268 APQKMVENQIYNIGTGRSISILQLA 292
>gi|402488593|ref|ZP_10835403.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401812440|gb|EJT04792.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 326
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH V++ G ++ P IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAQGHHVSVYNRGLRSN-----PLPEGVTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D A+ +DVV D V R + +A + G Q++FISSA +Y
Sbjct: 55 SSYADLAKA-------NYDVVCQFIAFTPDQVGRDIEVFAGNCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG-----NN 239
++PP E + P + Q + E W RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPYWPYSQAKIACEELLKKSSNLAWTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P + G G + D + + + EAA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPTIVAGDGHTPWTLTRAVDFAVPF-VGLFAKEAALNEIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ AG
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHIPTDTLIRYNPEWAG 256
>gi|390439716|ref|ZP_10228094.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
gi|389836873|emb|CCI32218.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
Length = 326
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SEN 221
+ + + +GVK F+FISS G + E PD+ + +Q E+ + ++
Sbjct: 100 LVEQSIQAGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQALINLAKDS 159
Query: 222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSML 278
W RP + G GN + DR+++ KR +P+P G+ + V +L + +
Sbjct: 160 NMTWTILRPTLVYGPGNPGN-----IDRLMKLIKRGLPLPFGAVKNRRSFVFVGNLVAAI 214
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+++P AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 215 ITCLDHPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|383452490|ref|YP_005366479.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
gi|380727508|gb|AFE03510.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
Length = 389
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 35/275 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--A 142
GG +G L + GH +T+ G N F ++ G DP
Sbjct: 53 GGTRFLGPALVQVAQARGHTLTLFNRGKSNP--------GLFPDVEKLQGDR---DPNKG 101
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + G +D V+D +G V+ A+ + V Q++FISS +YK + E
Sbjct: 102 EGLKALAGRKWDAVIDTSGYVPRVVKASAELL-APNVGQYVFISSISVYKEMTKQNLNES 160
Query: 203 DVVK--PDAGHVQVE-------KYISENFSNWA------SFRPQYMIGSGNNKDCEEWFF 247
D V PD +V K + E + A + RP ++G + D ++
Sbjct: 161 DAVGTLPDETTEEVGETSYGPLKALCEKAAETALPGRTLNIRPGLIVGPDDGSDRFTYWP 220
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGM 306
R+ + V PG G + RDL++ + + N E ++ IFN+ + + + GM
Sbjct: 221 LRVAKGGEVLAPGDGEDPVQVIDARDLAAFI---IRNVERRTTGIFNVTGPVQPMKMKGM 277
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ +A G D A +D +K F +M
Sbjct: 278 LETLREATGSDARFTWVD--TAFLDQQKVTAFGDM 310
>gi|423605268|ref|ZP_17581161.1| hypothetical protein IIK_01849 [Bacillus cereus VD102]
gi|401244416|gb|EJR50780.1| hypothetical protein IIK_01849 [Bacillus cereus VD102]
Length = 345
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 215 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|423013033|ref|ZP_17003754.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
gi|338784021|gb|EGP48369.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
Length = 317
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 32/274 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L +EL G G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAALVRELQGRGYR-QVITRSHSELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ V D +NL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQNHPV--DFLYRNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPLRED 124
Query: 204 --------------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFD 248
+ AG E Y E +++ P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREYGAHFVCAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V + GSG +V DL+ + +E P A ++N+ + +
Sbjct: 185 ALIRKFHEGREAGDDSVTLWGSGKPLREFLYVDDLARACVMLMETPTA--EGMYNIGAGQ 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A++ AQ G IV+ K G K
Sbjct: 243 DLSIAELARVVAQVVGYQGNIVYDASKPDGTPRK 276
>gi|15789654|ref|NP_279478.1| hypothetical protein VNG0405C [Halobacterium sp. NRC-1]
gi|169235368|ref|YP_001688568.1| dtdpglucose 4,6-dehydratase-like protein [Halobacterium salinarum
R1]
gi|10580018|gb|AAG18958.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726434|emb|CAP13219.1| NAD-dependent epimerase/dehydratase [Halobacterium salinarum R1]
Length = 329
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 101/268 (37%), Gaps = 39/268 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL ++VT G ++ PF + + V GD E
Sbjct: 8 GGTRFIGRHLVAELLAHDYDVTTFNRGTHDN------PFADDDRVAR-----VEGDRTER 56
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
++ V D V D V D V ++++SS Y A+E P E
Sbjct: 57 RALLDAKRTVDPDAVFDCVAYKPRDVESATDI--FGDVDAYVYVSSGAAYA-AEEVPKRE 113
Query: 202 GDV-------------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
G+ + AG V + + A RP + G + +
Sbjct: 114 GETRLESCSAEEATDDSSATYGARKAAGDRIVFEAAARGVPAMA-VRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ +R+ + + +PG G +V D++ L L E+ E + +N+ AVT
Sbjct: 173 LAYWVERVAERDEIVVPGDGTNLWQRVYVEDVARGLRLVAEDGEPGEA--YNVGDRNAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
LDGM L A A VE + P+ I
Sbjct: 231 LDGMLDLIADALDTSVERSYTSPRELSI 258
>gi|430003772|emb|CCF19561.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Rhizobium sp.]
Length = 368
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA E P +AS ++ N+ S +A T++
Sbjct: 227 FASRLANGQPPTIFEDGQQRRDFVHVRDVARAFRLAYEQP-SASGHVINVGSGQAYTVEE 285
Query: 306 MAKLCAQAAGLPV---EIVHYDPKAAGIDAKKAF 336
+A L A A G+P EI+H KA D + F
Sbjct: 286 VATLLADAMGVPEIKPEIMH---KARSGDIRNCF 316
>gi|228901562|ref|ZP_04065743.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|434375994|ref|YP_006610638.1| isoflavone reductase [Bacillus thuringiensis HD-789]
gi|228858087|gb|EEN02566.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|401874551|gb|AFQ26718.1| isoflavone reductase [Bacillus thuringiensis HD-789]
Length = 345
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 49/290 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVTI G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAVVEEALKRGHEVTIFNRGTNNE---------IFPEVEHLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DV++D G + +R + D K++ +K ++FISS +YK D
Sbjct: 49 RN-GDVSSLEN----RKWDVIVDTCGFSPHHIRNIGDVLKNN-IKHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPRCVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++S EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVASFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
I + +T++ + C + V D + ++ K P+ M
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAAFVWVD--ESFMNEHKVQPWTEM 266
>gi|296139544|ref|YP_003646787.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
gi|296027678|gb|ADG78448.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
Length = 327
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 110/284 (38%), Gaps = 51/284 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GH+VT++ D + NR E V AG V GD A
Sbjct: 6 TGGAGYVGSVCTQVLLEQGHDVTVL-------DDLSTG--NR--EAVPAGATFVEGDVAT 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADWAK-------------SSGVKQFLFIS 186
++ FD VL K+L P W ++GV + +F S
Sbjct: 55 AARQILADGEFDGVLHFAAKSLVGESVTHPHKYWQGNVVTTLSLLDAMLAAGVPRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E P + + I +++A S R + GS
Sbjct: 115 TAATYGEPESVPITEDARTAPTNTYGATKLAIDAAITSYATAYGLAAVSLRYFNVAGSYA 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E +++ + + + G+ G + HV+DL+ LA++
Sbjct: 175 GIGENREVETHLIPLVLQTALGQRADIAVFGADYPTADGTAVRDYVHVKDLADAHLLALD 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+ + +IFNL S ++ + C + GL + V D +A
Sbjct: 235 HARTGAHDIFNLGSGEGFSVRQVIDTCREVTGLEIPEVAADRRA 278
>gi|453073920|ref|ZP_21976718.1| UDP-glucose 4-epimerase [Rhodococcus triatomae BKS 15-14]
gi|452765406|gb|EME23663.1| UDP-glucose 4-epimerase [Rhodococcus triatomae BKS 15-14]
Length = 328
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 52/286 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GH+V + V D ++ P +G + V GD A+
Sbjct: 6 TGGAGYVGSVCATVLLERGHDVVV--VDDLSTGNAGAVP---------SGAEFVEGDVAD 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
V V+G FD VL ++L +P W +++G + +F S
Sbjct: 55 VAARVLGDARFDGVLHFAAQSLVGESVEQPAKYWQGNVVTTLTLLEAMRAAGTPKLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE--NFSNWASFRPQYM------I 234
+A Y + P E D +P A + ++ I+ N A+ +Y +
Sbjct: 115 TAATYGEPERTPITEDDPTRPTNPYGATKLAIDHAITSYANAYGLAATSLRYFNVAGAHL 174
Query: 235 GSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G+G N+ E +++ + + + G+ G + HV DL+ LA++
Sbjct: 175 GAGENRVVETHLIPLVLQVALGQRDKISVFGTDWPTPDGTAVRDYIHVLDLADAHLLALD 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ + ++NL S ++ + C + GLP+ V P+ AG
Sbjct: 235 HATPGTHRVYNLGSGAGFSVREVISSCRRVTGLPIA-VEDAPRRAG 279
>gi|391229518|ref|ZP_10265724.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
gi|391219179|gb|EIP97599.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
Length = 324
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 52/262 (19%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENS-------------------DKMKKPPFNR 125
GG IG +LA LL G +VT + + + + + ++ PP
Sbjct: 8 GGEGFIGRHLAARLLNDGQQVTSVDLAESDRREGGGRRFVTADVRATLTFETLESPPLVL 67
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
FN ++A +T G P D NL+ V D+A+ +GV+ +F
Sbjct: 68 FN--LAAVHRTP-GHPNR--------------DYFDANLNGAENVCDFARKTGVRTIVFT 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWAS----------FRPQYMI 234
SS Y A E E + P+ + + K ++E+ W + RP +
Sbjct: 111 SSIAPYG-ASEELKTEETLPTPNTAY-GISKLVAEHIHRRWQAEKPSERRLVIVRPGVVF 168
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G G + ++ +R++ PG +V+D++++L E PE+ ++N
Sbjct: 169 GHGEKGNVTRLYW--ALRRKRFAYPGRTDTIKASIYVKDVAALLAEMSERPESGVF-VYN 225
Query: 295 LVSDRAVTLDGMAKLCAQAAGL 316
L + A T+ + + + G+
Sbjct: 226 LTYEPAPTIKDICTVMSTVTGV 247
>gi|240144730|ref|ZP_04743331.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
gi|257203251|gb|EEV01536.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
Length = 304
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK++I N IG A E +E+T + + D + + + + N
Sbjct: 2 KKMIITGVN----GFIG-RCAMEYFSKDYEITGIDLADRYCEDGAEIHYYQCN------- 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVADW------------AKSSGV 179
+ D E+ N+ GV DV+L G N+ A V P+AD A S
Sbjct: 50 --MSKDSQELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALQSFE 107
Query: 180 KQ--FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI--- 234
K+ +F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 108 KRPKIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCV 166
Query: 235 ------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPE 286
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 167 RIFSAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE 226
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + V++ +A++ A G +IV ++
Sbjct: 227 ----EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFN 260
>gi|432330822|ref|YP_007248965.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
gi|432137531|gb|AGB02458.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
Length = 313
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 110/288 (38%), Gaps = 61/288 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPF---------------- 123
+GG IG ++A+ L+ +GHEV I + EN + + P
Sbjct: 6 TGGAGFIGSHIAEGLVANGHEVVIFDNFFSGKKENVNDLLAGPNASLIEGTILDSATLRK 65
Query: 124 ------NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
F+E A DP E V NL V A+
Sbjct: 66 AFEGADGIFHEAAIASVPRSVADPRETHEV---------------NLSGTVNVLMAARDC 110
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------- 227
GVK+ +F SSA +Y E P E + P + + V K EN+ + S
Sbjct: 111 GVKKVVFASSAAVYGDKPELPKRESMMPDPLSPYA-VTKSAGENYCSVFSRLYGMQCVSL 169
Query: 228 -----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
F P+ GS + ++ + + K PV I G G Q + +V+D+ LA+
Sbjct: 170 RYFNVFGPRQDPGSPYSGVITKFITNTLAHK-PVTIFGDGKQTRDFVYVKDVVRANILAM 228
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
E+P S ++N+ S + L + ++ A +G+ V + P A +
Sbjct: 229 ESP---VSGVYNVASGSQLDLMELLEIVANVSGIRVPVEFVQPAAGDV 273
>gi|398346905|ref|ZP_10531608.1| UDP-glucose 4-epimerase [Leptospira broomii str. 5399]
Length = 308
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSA---GIYKPADEPPHVEGDVVKP--DAGHVQVE-- 215
N++ + +A++A +++F++ISS G P DEP VE D KP D G ++E
Sbjct: 82 NVETTKLLAEFAIRYKIRKFIYISSVKALGERSPTDEPLTVE-DEPKPEDDYGKSKLEAE 140
Query: 216 ----KYISENFSNWASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNI 268
S F + RP ++GSG N + W +VRK +P+P +G++ ++
Sbjct: 141 DTLRSICSHEFLQYTILRPPLIVGSGAKGNLNRLTW----LVRK-GIPLPFAGIKNKRSL 195
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
VR+ + ++ + A++ N LVSD +++ + + ++A G+ + ++
Sbjct: 196 VGVRNFCDAILFSLIH--ASTDNKIFLVSDSSLSTPELFRYFSEALGVRDSLFYF 248
>gi|452207826|ref|YP_007487948.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
gi|452083926|emb|CCQ37254.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
Length = 331
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG + ELL +G+EVT+ G PF + + G +T D
Sbjct: 9 GGTRFIGRHTVSELLSAGYEVTMFNRG------THANPFADEDRVTHVEGDRTNDSDLRR 62
Query: 144 VG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
G +V + D V AV AD V ++++SS Y AD P EG
Sbjct: 63 AGLDVEPDIVIDCVAYRPRDVHTAVDVFAD------VDAYVYVSSGSAYG-ADRVPKREG 115
Query: 203 DVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEE 244
+ + E++ N S RP + G + + +
Sbjct: 116 ETPLCPCSVAEATDDTDESYGPRKAEGDRAVFSAADRGVNAMSVRPPVVYGPHDYTERFD 175
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ + +PG+G +A+V D++ L + E +S +N+ D A L
Sbjct: 176 YWIDRVDTHDRIVVPGNGSSLWQLAYVEDVARALRIVAER--GSSGEAYNVGEDHAPILR 233
Query: 305 GMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPF 338
+L A+A PV + A G+ A AFP
Sbjct: 234 EWVELVAEACATDVTPVFASERELGAVGLSA-DAFPL 269
>gi|417917632|ref|ZP_12561191.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
gi|342830269|gb|EGU64608.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
Length = 325
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 60/296 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------------------DENSDKMKKPPFN 124
+G +G Y+ ELL H+ TI+ G D ++ + + F
Sbjct: 6 TGATGFLGKYVIDELLA--HDYTIVAFGRNEKIGKALEGERVQFIKGDLSTIEELRQAFQ 63
Query: 125 RFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ +V AG T WG NVVG + V D + VK+
Sbjct: 64 SVDAVVHAGALSTAWGPWKAFYQANVVG-----------------TKNVLDLCREYAVKR 106
Query: 182 FLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQ 231
+++SS IY + ++ E D P H+ K SE FS++ RP+
Sbjct: 107 LVYVSSPSIYAAGKDQLNIKESDT--PTENHLNNYIRSKLASEKLFSDYPDVPSIILRPR 164
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G+ R+ RK +P+ G Q ++ V +++ + LA+E E A
Sbjct: 165 GLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKE-AQGQ 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY 347
++N+ + T + + + G P + Y AG+ A A+ V+ FF+
Sbjct: 222 VYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGAAYSLEG-VYRFFH 273
>gi|50954416|ref|YP_061704.1| hypothetical protein Lxx06550 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950898|gb|AAT88599.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 302
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------P 193
DP + V+G +FDV + + + D + V Q++FISSA Y+ P
Sbjct: 27 DPESMHAVLGQRSFDVAAEFLAFTPEHIHTDFDLFEGR-VGQYMFISSASSYQTPPSRLP 85
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA----SFRPQYMIGSGNNKDCEEWF-FD 248
E + + + E + + + RP + W +
Sbjct: 86 VTESTPLRNPFWQYSRDKIACEDLLVQGYRERGFPITIVRPSHTYDRTMIPTSGHWTDLE 145
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+ R PV + G G I H D + T + PEA + F++ SD A T D +
Sbjct: 146 RMRRGAPVVVHGDGTGRWTITHSTDFAVAFTGLLGRPEAV-GDTFHITSDEAPTWDQIYC 204
Query: 309 LCAQAAGLPVEIVH 322
A+A G+ E+VH
Sbjct: 205 YLAEALGVEAELVH 218
>gi|228928274|ref|ZP_04091315.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946838|ref|ZP_04109140.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228812825|gb|EEM59144.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831321|gb|EEM76917.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 326
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 4 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 63
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 64 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 108
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 109 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 168
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 169 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 226
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 227 TNDERINL 234
>gi|448712657|ref|ZP_21701776.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
gi|445790364|gb|EMA41029.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
Length = 362
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 123/321 (38%), Gaps = 55/321 (17%)
Query: 60 SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK 119
+ S T AS + ++I GG IG +L ELL ++VT+ G +
Sbjct: 8 TDASTHTTTASRDLEDALVI-----GGTRFIGRHLVDELLRHDYDVTLFNRG------TR 56
Query: 120 KPPFNRFNEIVSAGGKTVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ PF + + G D E FD V A R AD
Sbjct: 57 ENPFADDDRVDHLEGDRTDDDALEAAAAEVDPDAVFDCVAYYPADVRTATRVFAD----- 111
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV--------VKPDAGH-------VQVEKYISE-- 220
K ++++SS Y D P EG+ D H + ++ + E
Sbjct: 112 -CKAYVYVSSGAAYGREDVPKR-EGETPLAACTAEQATDDSHDTYGNRKAEGDRAVFEAA 169
Query: 221 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
+ N S RP + G + + +++ DR+ R V +PG G + +V D++S L
Sbjct: 170 ADGVNAMSLRPPIVYGPHDYTERLDFWIDRVNRFDRVIVPGDGTNIWHRVYVEDVASALR 229
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ------------AAGLPVEIVHYDPK- 326
L E E + +N R VTL+ M +L A+ AA +E+VH P+
Sbjct: 230 LVAERGEPGEA--YNTGDRRLVTLEEMVELIAEQLARVGSGDEEPAADDGIELVHAGPRE 287
Query: 327 --AAGIDAKKAFPFRNMVFIF 345
A GI+ + +R+ +
Sbjct: 288 LAAGGIELEDYPLYRSHPHVM 308
>gi|336401994|ref|ZP_08582739.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
gi|335948716|gb|EGN10418.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
Length = 338
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 20/200 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADE-- 196
D V + +DVV G + V+ ++ +Q++FISSA Y KP +
Sbjct: 50 DEEAVAKAIASEHYDVVAQFIGYTAEDVKRDIRLFQNK-TRQYIFISSASAYQKPLADYR 108
Query: 197 --------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN-----NKDCE 243
P+ + K +A V + Y + F RP + + D
Sbjct: 109 ITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TIVRPSHTYNGTKPPVSVHGDKG 167
Query: 244 EW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W RI+ +PV IPG G + H +D + + NP A N F++ +D ++T
Sbjct: 168 NWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAI-GNAFHITTDESMT 226
Query: 303 LDGMAKLCAQAAGLPVEIVH 322
+ + + A A G P+ +H
Sbjct: 227 WNQIYQTIADALGKPLNALH 246
>gi|13475790|ref|NP_107357.1| hypothetical protein mll6957 [Mesorhizobium loti MAFF303099]
gi|14026546|dbj|BAB53143.1| mll6957 [Mesorhizobium loti MAFF303099]
Length = 318
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 43/257 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+V+I+ GG +G YL L+ +G+EV ++ G R ++A K
Sbjct: 3 RVVII----GGSGHVGTYLVPRLVEAGYEVVNVSRGQ------------RAAYTLNAAWK 46
Query: 136 TVWGDPAEV-----------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
+V +P + G V + D+V+D LD+ + + A V+ FL
Sbjct: 47 SV--EPVVIDRDTEEKAGTFGEKVRALKADIVVDMISFTLDSTKQIVG-ALRGEVQHFLH 103
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGS 236
+ +Y P E P + + I N A FRP +++G
Sbjct: 104 CGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGP 163
Query: 237 GNNKDCEEWFFD-----RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
G FD +I R P+ +P G + + H D++ M+ A+ + A
Sbjct: 164 GWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGE 223
Query: 292 IFNLVSDRAVTLDGMAK 308
FN VS +A+ L G A+
Sbjct: 224 AFNTVSPQAINLRGYAE 240
>gi|417940628|ref|ZP_12583916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
gi|343389509|gb|EGV02094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
Length = 326
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL S ++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSSYQVRAFGRNRKMGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|315427598|dbj|BAJ49197.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum]
Length = 315
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++F++ ++ +P+PI G+G Q + +V D + LA+ENP AA F L + TL+
Sbjct: 192 YWFEQAIKNKPIPIYGTGEQIRDYTYVEDTAKAYILAMENP-AAIGETFLLPTGIGTTLN 250
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGI 330
+AK + + ++ P+ I
Sbjct: 251 QLAKKILEITESQAGVEYHPPRKGDI 276
>gi|300692902|ref|YP_003753897.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum PSI07]
gi|299079962|emb|CBJ52639.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
PSI07]
gi|344168492|emb|CCA80782.1| putative NADH dehydrogenase (ubiquinone) [blood disease bacterium
R229]
gi|344173236|emb|CCA88380.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia syzygii R24]
Length = 334
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ I+ +
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERVITGSD 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G++ F R+ R P VP+ + +F + +V D+++ A
Sbjct: 163 LDWTVFRPSVVFGPGDHF---LNLFARMQRLAPFVPLACAEARFQPV-YVDDVAAAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFRHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|83309162|ref|YP_419426.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum
AMB-1]
gi|82944003|dbj|BAE48867.1| Nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum
AMB-1]
Length = 338
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G L +LL GH+VT++ + D F ++ + V GD +
Sbjct: 18 TGGAGYVGSALVPKLLAEGHKVTVLDLYLYGED--------LFADLRGPNLREVKGDIRD 69
Query: 144 VGNVVGGVT-FDVVLD--------------NNGK--NLDAVRPVADWAKSSGVKQFLFIS 186
+ V + D V+ N G+ N +A RP+ AK++GVK+F++ S
Sbjct: 70 IKVVEDALKGCDCVIHLACISNDPSYDLDPNLGRSINYEAFRPMVRAAKAAGVKRFIYAS 129
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW-------ASFRPQYMIGSGNN 239
S+ +Y DEP E ++P + + + + + RP + G
Sbjct: 130 SSSVYGVKDEPEVTEDLPLEPLTDYSKFKALCEQELEAEREPGFAVCTIRPSTVCGYAKR 189
Query: 240 KDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNL 295
+ + F ++ V + + G + NI H+ D+ ++ P E I+N
Sbjct: 190 QRLDVVVNIFTNQAVNNGKIRVTGGPQKRPNI-HIDDMVRCYLHLLQQPAEKIDGKIWN- 247
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKK 334
D + +A++ + G VEI DP++ + KK
Sbjct: 248 AGDTNFPISELAEIVRKVVG-QVEIETLPTNDPRSYHVSGKK 288
>gi|425438159|ref|ZP_18818568.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
gi|389676719|emb|CCH94292.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
Length = 326
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 227
+GVK F+FISS G + E PD+ + +Q E+ + ++ W
Sbjct: 106 QAGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQALINLAKDSNMTWTI 165
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPE 286
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 166 IRPTLVYGPGNPGNMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHPN 222
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 223 AANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|340344000|ref|ZP_08667132.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519141|gb|EGP92864.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 310
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD--AGHV 212
N N++ V ++ + +K+ +F SSA IY K + P V V G
Sbjct: 92 NDVNVNGTLNVLEFCRKRKIKKLVFTSSAAIYGDYEKKITETSPTVPTSVYGSTKLTGEQ 151
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ Y S N + RP + G N F DR+ +P I G+G Q +
Sbjct: 152 YCKIYSSLFGINITALRPFNIYGPRQNDAYAGVISKFMDRLNENKPPIIFGNGKQTRDFI 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK---LCAQAAGL 316
HV D++ LA++ + S ++FNL + ++ +++ +++ L A +GL
Sbjct: 212 HVDDVAQAFYLALKY-KKKSFDVFNLATGKSTSINELSEIFLLAANKSGL 260
>gi|220911268|ref|YP_002486577.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
gi|219858146|gb|ACL38488.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
Length = 350
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 26/251 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI A+ + GH +TI+ G P E++ A + D A V
Sbjct: 29 GGTGVISAAAAEHAVALGHRLTILNRGRSTR------PVPDGAEVLHADVR----DVAAV 78
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD 203
V+GG FD V D D + + + Q++FISSA Y KP P +E
Sbjct: 79 REVLGGREFDAVADFISYTPDQTQAGLELLRGR-TGQYVFISSASAYQKPPTRLPILEST 137
Query: 204 VVKPDAGHVQVEK----------YISENFSNWASFRPQYMIGSGNNKDCEEWF-FDRIVR 252
+K +K Y E+F RP + W R+
Sbjct: 138 PLKNPFWQYSRDKIACEELLFRAYRDEDFP-LTVVRPSHTYDRTKIAMVGGWTDIHRMRA 196
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
PV + G G + H RD + + P+A + + + SD + + + +L A+
Sbjct: 197 GLPVMVHGDGTSLWTLTHSRDFAKAFVGLLGRPQAVGES-YTITSDEYLPWNQIYRLFAR 255
Query: 313 AAGLPV-EIVH 322
AAG+ E+VH
Sbjct: 256 AAGVAEPELVH 266
>gi|298481169|ref|ZP_06999363.1| mRNA-binding protein [Bacteroides sp. D22]
gi|298272743|gb|EFI14310.1| mRNA-binding protein [Bacteroides sp. D22]
Length = 338
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|448471165|ref|ZP_21600769.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445820840|gb|EMA70642.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 319
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---- 236
+ + SS IY +E P E D +PD+ + V+K ++++ + Y + +
Sbjct: 123 RVVLASSVAIYGDPEELPVREDDPKRPDSPY-GVDKLAIDHYARL--YHEHYGLDTVALR 179
Query: 237 -----------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
G+ F D+ RP+ + G G Q + HV D+ A E
Sbjct: 180 YFNVYGPRQSGGSYSGVIGTFVDQARSGRPITVHGDGQQTRDFVHVADVVRANLAAAETD 239
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
A FN+ + +VT+ +A+ AG EIVH DP+ +D +A
Sbjct: 240 --AVGRGFNIGTGESVTIRELAEEIRSIAGADSEIVHTDPRDGDVDRSRA 287
>gi|388469694|ref|ZP_10143903.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
synxantha BG33R]
gi|388006391|gb|EIK67657.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
synxantha BG33R]
Length = 311
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 116/290 (40%), Gaps = 51/290 (17%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KK VLI +GG IG +L LL G+ V ++ +N K+ NE V
Sbjct: 5 KKWVLI----TGGAGFIGSHLVDALLAGGYWVRVL----DNLSTGKRSNLPLDNERV--- 53
Query: 134 GKTVWGDPA---EVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKS 176
+ + GD A EV + GVT D + + N V + +
Sbjct: 54 -ELLEGDVANAEEVARALVGVTAVVHLAAVASVQASVDDPVSTHQSNFVGTLNVCEGMRK 112
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+GVK+ +F SSA +Y E ++ K +K E + ++ +R Q+ +
Sbjct: 113 AGVKRVVFASSAAVYGNNGEGASIDEQTAKAPLTPYASDKLAGEYYFDF--YRRQHGLEP 170
Query: 237 ---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
G +D F +R R P+ + G G Q + +V DL ++L
Sbjct: 171 VIFRFFNIFGPRQDPSSPYSGVISIFSERAQRGLPITVYGDGEQTRDFMYVEDLVNVLVQ 230
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
AVE P+A I N+ R TL + + +A G LP V Y+ +G
Sbjct: 231 AVEVPDAPLGAI-NVGWSRTTTLRQVLQALEEALGSLPA--VTYEAARSG 277
>gi|302559535|ref|ZP_07311877.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
gi|302477153|gb|EFL40246.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
Length = 336
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ELL GH V ++ D + P AG + G D
Sbjct: 3 TGGAGFIGSHVARELLDRGHRVIVLD--DLSGGTAANVP---------AGAEFRHGSVCD 51
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSG-VKQFL 183
P V V D V N N+ + + A ++G VK F+
Sbjct: 52 PDVVDAVFAAHRVDYVFHLAAYAAEGLSHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH------VQVEKYISENFSN--WASFRPQYMIG 235
F SS +Y A++ P E V P+ + V+ E ++ + FRP + G
Sbjct: 112 FTSSIAVYG-ANQLPMSEDLVPAPEDPYGIAKFSVEQELRVTHEMFGLPYVIFRPHNVYG 170
Query: 236 SGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
N ++ F ++ +R + G G Q ++++D++ + +VE P AA +
Sbjct: 171 EYQNIGDRYRNVIGIFMNQALRGEEFTVFGDGEQTRAFSYIKDVAPAIARSVELP-AAYN 229
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+FN+ D+ +++ +A +A G+ + + H
Sbjct: 230 EVFNVGGDQVYSVNRIAAAVCEAMGVELRVNH 261
>gi|425901837|ref|ZP_18878428.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892875|gb|EJL09351.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 309
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 41/277 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL G+ V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGYSVRILD--DLSTGKPGNLPLDNPRVELIEGD----VADAA 62
Query: 143 EVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V + G + D + + N V + + +GVK+ LF SSA
Sbjct: 63 LVARAMSGCRAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNN 239
+Y E ++ D K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGESIDEDTPKAPLTPYASDKLASEYYFDF--YRRQHGLEPAIFRFFNIFGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L ++E P+ +
Sbjct: 181 QDPSSPYSGVISIFCERAQKGLPITVFGDGEQTRDFMYVEDLVDVLVQSLETPQLEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
N+ ++A TL + ++ + G P+ + Y P +G
Sbjct: 241 -NVGLNQATTLKQLLEVLGEVVG-PLPPISYGPARSG 275
>gi|196032305|ref|ZP_03099719.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
gi|195995056|gb|EDX59010.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
Length = 328
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 6 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 65
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 66 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 111 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 170
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 171 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 228
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 229 TNDERINL 236
>gi|423213757|ref|ZP_17200286.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
gi|295084039|emb|CBK65562.1| Nucleoside-diphosphate-sugar epimerases [Bacteroides xylanisolvens
XB1A]
gi|392693414|gb|EIY86646.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
Length = 338
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|163792518|ref|ZP_02186495.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
gi|159182223|gb|EDP66732.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
Length = 328
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASF------ 228
S G+K F++ SS+ +Y E P D V K +E S ++AS
Sbjct: 120 SRGLKHFVYASSSSVYGANREIPFSVDDRVDRPMSFYGATKRANEAMSYSYASLYGIPTT 179
Query: 229 --RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G D W F DRI+ RP+ + G + ++ D+ + + A+++P
Sbjct: 180 GLRFFTVYGPWGRPDMSPWLFTDRILNGRPIEVFNHGQMRRDFTYIDDIVAGVVAALDHP 239
Query: 286 EAASSN-----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
A S+ +NL ++ V L K+ A G P E++
Sbjct: 240 PAGSAESPPIATYNLGNNSPVALLDYIKVIEAACGKPAELI 280
>gi|393199081|ref|YP_006460923.1| nucleoside-diphosphate-sugar epimerase [Solibacillus silvestris
StLB046]
gi|327438412|dbj|BAK14777.1| nucleoside-diphosphate-sugar epimerase [Solibacillus silvestris
StLB046]
Length = 295
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG G L + LL HEVTI+T G M + PF E +
Sbjct: 2 KKILVL----GGTRFFGRKLVELLLEQKHEVTIVTRG------MSENPFGDAVEHIKVDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K D G V+ TFD+V DN + + + + D + + +F S+ +Y+ A
Sbjct: 52 K----DTEAFGKVLENRTFDIVYDNICYSPNEAKQLCDLFNGK-IGKLVFTSTLAVYE-A 105
Query: 195 DEPPHVEGD 203
D PH E D
Sbjct: 106 DGKPHSEED 114
>gi|17544806|ref|NP_518208.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17427095|emb|CAD13615.1| putative nadh-ubiquinone oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 334
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ ++ +
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTGSD 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G D F R+ R P VP+ + +F + +V D+++ A
Sbjct: 163 LDWTVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAAAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|160884450|ref|ZP_02065453.1| hypothetical protein BACOVA_02434 [Bacteroides ovatus ATCC 8483]
gi|237718089|ref|ZP_04548570.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293369749|ref|ZP_06616325.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|299145996|ref|ZP_07039064.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|336413558|ref|ZP_08593910.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|423286499|ref|ZP_17265350.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
gi|156110189|gb|EDO11934.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus ATCC 8483]
gi|229452510|gb|EEO58301.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292635171|gb|EFF53687.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|298516487|gb|EFI40368.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|335938602|gb|EGN00492.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|392675186|gb|EIY68628.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
Length = 335
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSRNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|448465391|ref|ZP_21598801.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814982|gb|EMA64925.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 298
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 105/264 (39%), Gaps = 46/264 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
KVL+ +GG IG YL + L GHEVT ++ + P + + SA G
Sbjct: 2 KVLV----AGGTGFIGSYLCRALADGGHEVTALS----------RSPGDVPEGVASATGD 47
Query: 135 ----KTVWGDPAEVGNVVGGVTFDVVLDNNGKNL-------DAVRPVADWAKSSGVKQFL 183
++ G VV V + + G N+ R + A+ GV++F+
Sbjct: 48 VTDYDSIAGAVEGQDAVVNLVALSPLFEPKGGNIMHDRIHRGGTRNLVRAAEDGGVERFV 107
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN----- 238
+S+ G AD +GD A + E + ++ +W FRP + G G
Sbjct: 108 QLSALG----AD----ADGDTAYIRA-KGEAEAIVRDSGLDWTIFRPSVVFGEGGEFVSF 158
Query: 239 NKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
K + F + P+ P+PG G HV DL ML A+E+ E + +
Sbjct: 159 TKRLKGMFAPGV----PLYPLPGGGKTRFQPIHVEDLVPMLVAALEDDEHVGET-YEVGG 213
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIV 321
+TL + L +A V IV
Sbjct: 214 PETLTLRQVTDLVYEAENKGVTIV 237
>gi|262406510|ref|ZP_06083059.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646100|ref|ZP_06723763.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294808306|ref|ZP_06767064.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345510060|ref|ZP_08789638.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|229445414|gb|EEO51205.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|262355213|gb|EEZ04304.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638544|gb|EFF56899.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294444525|gb|EFG13234.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 338
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYHITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|228934482|ref|ZP_04097317.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825119|gb|EEM70916.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 326
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 4 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 63
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 64 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 108
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 109 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDHAFAYGLPVITIRPRALFG 168
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 169 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 226
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 227 TNDERINL 234
>gi|228921968|ref|ZP_04085279.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837576|gb|EEM82906.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 326
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + +K G+K+ + +S+ IY DE +V + PDA H K+++E
Sbjct: 86 NVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDAFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFMHGLPVITIRPRAVFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|30265466|ref|NP_847843.1| hypothetical protein BA_5697 [Bacillus anthracis str. Ames]
gi|47531032|ref|YP_022381.1| hypothetical protein GBAA_5697 [Bacillus anthracis str. 'Ames
Ancestor']
gi|165872540|ref|ZP_02217173.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167636229|ref|ZP_02394532.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641437|ref|ZP_02399687.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170689195|ref|ZP_02880392.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170708645|ref|ZP_02899084.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177651896|ref|ZP_02934479.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568930|ref|ZP_03021832.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227818217|ref|YP_002818226.1| hypothetical protein BAMEG_5745 [Bacillus anthracis str. CDC 684]
gi|229600447|ref|YP_002869657.1| hypothetical protein BAA_5728 [Bacillus anthracis str. A0248]
gi|254687111|ref|ZP_05150969.1| hypothetical protein BantC_25173 [Bacillus anthracis str.
CNEVA-9066]
gi|254733555|ref|ZP_05191276.1| hypothetical protein BantWNA_00120 [Bacillus anthracis str. Western
North America USA6153]
gi|254742168|ref|ZP_05199855.1| hypothetical protein BantKB_14343 [Bacillus anthracis str. Kruger
B]
gi|254755922|ref|ZP_05207954.1| hypothetical protein BantV_25914 [Bacillus anthracis str. Vollum]
gi|254761634|ref|ZP_05213654.1| hypothetical protein BantA9_25253 [Bacillus anthracis str.
Australia 94]
gi|421508099|ref|ZP_15955015.1| hypothetical protein B353_09886 [Bacillus anthracis str. UR-1]
gi|421640445|ref|ZP_16081028.1| hypothetical protein BABF1_25576 [Bacillus anthracis str. BF1]
gi|30260144|gb|AAP29329.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47506180|gb|AAT34856.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|164711763|gb|EDR17307.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510612|gb|EDR86008.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167528344|gb|EDR91115.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170126427|gb|EDS95315.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170666838|gb|EDT17604.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082600|gb|EDT67664.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190559997|gb|EDV13980.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007208|gb|ACP16951.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229264855|gb|ACQ46492.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|401821902|gb|EJT21056.1| hypothetical protein B353_09886 [Bacillus anthracis str. UR-1]
gi|403392398|gb|EJY89651.1| hypothetical protein BABF1_25576 [Bacillus anthracis str. BF1]
Length = 292
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 162
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 163 ENDYTKRLQFYVEHIVRKEPVAV 185
>gi|444913119|ref|ZP_21233273.1| hypothetical protein D187_05210 [Cystobacter fuscus DSM 2262]
gi|444716122|gb|ELW56977.1| hypothetical protein D187_05210 [Cystobacter fuscus DSM 2262]
Length = 382
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 37/258 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI+ GG A +G L + GH VT+ G +P F ++ G
Sbjct: 37 KRILIL----GGTAFLGPQLVEAARARGHTVTLFNRGK------TRPQL--FPDVEKLQG 84
Query: 135 KTVWGDP--AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
DP E + G T+D V+D +G VR A + V Q++FISS +YK
Sbjct: 85 DR---DPNKGEGLKALEGRTWDAVIDTSGYVPRLVRASAQ-LLAPHVGQYVFISSISVYK 140
Query: 193 PADEPPHVEGDVV----KPDAGHVQVEKY-----ISENFSNWA------SFRPQYMIGSG 237
P E V P + E Y + E + A + RP ++G
Sbjct: 141 DLSRPGLDETAPVATTSDPSNETIGEENYGALKALCEQEAEAAFPGRTTNIRPGLIVGPE 200
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ ++ +R+ R V PG G VRDL+ A++N + +FN
Sbjct: 201 DPTQRFTYWPERVARGGEVLAPGDGSDPVQFIDVRDLAEWTLHALDNRD---FGVFNATG 257
Query: 298 -DRAVTLDGMAKLCAQAA 314
R +T+ + + C QA+
Sbjct: 258 PTRPLTVRELLEACKQAS 275
>gi|229072912|ref|ZP_04206110.1| NAD-dependent epimerase/dehydratase [Bacillus cereus F65185]
gi|228710255|gb|EEL62231.1| NAD-dependent epimerase/dehydratase [Bacillus cereus F65185]
Length = 295
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 7 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 56
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN +L+A + + + + K+++ SS +Y
Sbjct: 57 -------EDEKQLAERLGDKSYDIVYDNLCYSLNAAKVICEVLRGK-TKKYVMTSSMAVY 108
Query: 192 KPA 194
+PA
Sbjct: 109 EPA 111
>gi|261409971|ref|YP_003246212.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
gi|261286434|gb|ACX68405.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
Length = 338
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 38/275 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + K+LL G E+ ++ G+ N D + + I+ A D +V
Sbjct: 7 GGTGTISTAITKQLLEQGCELYLLNRGNRN-DTLPEGA-----HILQADIH----DEDQV 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPV---ADWAKSSG-VKQFLFISSAGIYK-PADEPPH 199
++ + FDVV D A P D+ +G KQF+FISSA Y+ P +
Sbjct: 57 AKLIEHLDFDVVAD-----FIAFEPAHLERDYRLFAGKTKQFIFISSASAYQTPLSDYRI 111
Query: 200 VEGD-VVKPDAGH----VQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDCEEW 245
EG + P + + E Y+ + RP + I G + W
Sbjct: 112 TEGTPLSNPYWAYSRNKIACEDYLMNQYREHGFPVTIVRPSHTYDERSIPLGVHGSQGSW 171
Query: 246 -FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
R++ +PV I G G + H RD + + N A ++ ++ SD ++T +
Sbjct: 172 QVVKRMLENKPVLIHGDGTSLWTLTHNRDFAKGFIGLMGNIHAIGESV-HITSDESLTWN 230
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ ++ A A G+ + VH + +DA FR
Sbjct: 231 QIYEIIADALGVQLNAVHVSSEF--LDATSTQDFR 263
>gi|392383819|ref|YP_005033015.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
gi|356880534|emb|CCD01496.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
Length = 335
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 100/268 (37%), Gaps = 49/268 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG ++ L+ GH VT++ D S ++ V A + + GD
Sbjct: 6 TGGAGFIGSHITHRLVSLGHRVTVI---DNESTGLRSN--------VPAEVRYIRGDVTN 54
Query: 141 -----------PAEVGNVVGGVT----FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
P V ++ G V+ F + + N++ V GVK+ ++
Sbjct: 55 PADLDKAFEEVPDAVIHIAGQVSIIRAFSNPVGDLRTNVEGTVNVLQQCVERGVKRLIYA 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY------------- 232
SS Y A+ P E P + V KY E + + + RP
Sbjct: 115 SSMSAYGNAEVVPTPEDTPCSP-VSYYGVTKYAGERYVHLTAARPDLPGALAVTSFRMYN 173
Query: 233 MIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G D F I+R P+ I G G Q + + D+ A++NP A
Sbjct: 174 VYGPRQAVDNPYQGVLGIFLGNIIRGEPIRIYGDGKQTRDFVFIDDVVDAWVGALDNP-A 232
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ IFNL S R ++ +A L A G
Sbjct: 233 SHGKIFNLGSGRQTSISELADLALGALG 260
>gi|65317428|ref|ZP_00390387.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|386739312|ref|YP_006212493.1| hypothetical protein [Bacillus anthracis str. H9401]
gi|384389163|gb|AFH86824.1| Hypothetical Protein H9401_5440 [Bacillus anthracis str. H9401]
Length = 293
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 5 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 54
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 55 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 106
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 107 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 163
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 164 ENDYTKRLQFYVEHIVRKEPVAV 186
>gi|406919667|gb|EKD57900.1| hypothetical protein ACD_57C00108G0002 [uncultured bacterium]
Length = 304
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 55/272 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-----------------TVGDENSDKMKKPPFNRF 126
+GG IG ++ + LL SG++V ++ VGD + K
Sbjct: 6 TGGAGFIGSHVVRLLLESGYQVVVLDNLSHGFRQNVDKRAKLIVGDIRDSRKTKEALKGI 65
Query: 127 NEIVSAGGKTVW----GDPAEV--GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+ ++ G V DP + NV+G V L+ +R V G +
Sbjct: 66 DAVIHMAGLIVVPESVADPVKYYDNNVLGAVNL----------LECMRDV-------GCR 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYIS--ENFSNWASFRPQYMI 234
+ +F SSA +Y D+ P E V PD A +E Y+ N+ + +Y
Sbjct: 109 KIIFSSSACVYGTPDKLPIKEDAAVHPDNPYGATKAAIEVYLQTYHQIFNFDTIILRYFN 168
Query: 235 GSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
G K + F + K+P+P+ G Q + ++ DL+ ++ + +
Sbjct: 169 PYGPGKMGKPITHAIPNFIKATLAKKPIPLYWKGEQIRDFIYIDDLARA---HIDVLKLS 225
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
NIFN+ +++ + + + + + G V I
Sbjct: 226 GFNIFNIGTEKGIKVKDIVEEIFKIVGFRVPI 257
>gi|451818795|ref|YP_007454996.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784774|gb|AGF55742.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 276
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ A + ++++ +GVKQF++IS+ G+Y + P E + P G + KY SE
Sbjct: 83 NVGATLELLEYSRKTGVKQFIYISTGGVY-GFESNPFKEEEQCNP-HGIYSLSKYFSEKL 140
Query: 223 SNWASFRPQYMI-------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+ + I G G +I++ V + GM N ++ DL
Sbjct: 141 CMEYQNKIKITIIRVFFPYGKGQKGRLISNLIHKILKGEKVILNNEGMPLINPINIVDLC 200
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+++ V E IFN D V++ + + + G+
Sbjct: 201 NLINGVV---EKRLEGIFNACGDEIVSIKELCQRISDKFGI 238
>gi|254724106|ref|ZP_05185891.1| hypothetical protein BantA1_16823 [Bacillus anthracis str. A1055]
Length = 292
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 162
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 163 ENDYTKRLQFYVEHIVRKEPVAV 185
>gi|423523068|ref|ZP_17499541.1| hypothetical protein IGC_02451 [Bacillus cereus HuA4-10]
gi|401173226|gb|EJQ80439.1| hypothetical protein IGC_02451 [Bacillus cereus HuA4-10]
Length = 341
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F ++V
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLV----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + + +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 47 ---GDRNDNVSSLKNRKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTSEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWIQRVAKGGSVLVPGRKDRPVQLVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
D +T++ + C + E V D
Sbjct: 222 TG--PDDELTMEELLNTCKKVTKSDAEFVWVD 251
>gi|367469600|ref|ZP_09469343.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
gi|365815321|gb|EHN10476.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
Length = 464
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R R P+ I GSG Q + +V DL+ + A+ P+AA +NL SD T+ G
Sbjct: 189 FVGRARRGEPLTIAGSGEQERSFVYVEDLAEGVVRAL-APQAAGRT-YNLGSDETTTIRG 246
Query: 306 MAKLCAQAAGLPVEIVHYDPKA 327
+A++ PVEIVH + +A
Sbjct: 247 LAEVVRDVVA-PVEIVHTEGRA 267
>gi|402698219|ref|ZP_10846198.1| NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fragi A22]
Length = 309
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 100/266 (37%), Gaps = 41/266 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG L LL GH V I M+ G + M P V+ D
Sbjct: 9 TGGAGFIGSNLVDALLAKGHAVRILDDMSTGKRCNLPMDNPKVELIEGDVA--------D 60
Query: 141 PAEVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A V V+ G + D + + N V + + SGVK+ +F S
Sbjct: 61 AALVARVMAGCSAVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRESGVKRVVFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSG 237
SA +Y E + D K +K SE + ++ A FR + G
Sbjct: 121 SAAVYGNNGEGESIVEDTPKAPLTPYASDKLASEYYLDFYRRQHGLEPAIFRLFNVFGPR 180
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ F +R V+ P+ I G G Q + +V DL ++L AVE + +
Sbjct: 181 QDPSSPYSGVISIFSERAVKGLPITIFGDGEQTRDFIYVGDLVNILVQAVEARQVEEGAV 240
Query: 293 FNLVSDRAVTLDGMAK-LCAQAAGLP 317
N+ ++A TL M + L GLP
Sbjct: 241 -NVGLNKATTLKQMLEALGDVVGGLP 265
>gi|322370410|ref|ZP_08044969.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
gi|320550118|gb|EFW91773.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
Length = 310
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 42/281 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLIV GG +G L +EL G GH+VT+++ +SD + G +
Sbjct: 2 RVLIV----GGSGFVGTALTEELHGRGHDVTVLSRSPRDSD-------------LPTGVE 44
Query: 136 TVWGDPAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TV GD + ++ G + D V+ NL A+ P+ + + + + + A
Sbjct: 45 TVSGDVTDYESIEGAFSGRDAVV-----NLVALSPLFKPPSGASHESVHLGGTENVVRAA 99
Query: 195 DE---PPHVEGDVVKPDAGHV--------QVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
+E P V+ + D G + E+ + ++ W RP + G G E
Sbjct: 100 EEHGVPKLVQMSALGADPGGTTAYIRAKGEAEEVVRDSSLEWVIVRPSVVFGDGG----E 155
Query: 244 EWFFDRIVRKRPVP-IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F +++ V +PG G V DL+ +L VE+ +A ++L +T
Sbjct: 156 FVSFTKVLTTPYVTGLPGGGKTRFQPIWVGDLAPILADCVED-DARLGRAYDLGGPEVLT 214
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGI--DAKKAFPFRNM 341
L +AKL +A G V ++ AGI A PF M
Sbjct: 215 LADVAKLAYRADGKSVAVLPIPMPLAGIGLTVADAIPFVPM 255
>gi|295835463|ref|ZP_06822396.1| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
gi|295825502|gb|EDY43378.2| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
Length = 317
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPF---NRFNE 128
E+ ++ + +G ++G +A+ L GHEV T + D + R +
Sbjct: 13 ERARIFV----AGHRGLVGSAVARRLGADGHEVLTRTRTALDLRDAAATAAYLRETRPDA 68
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+V A K VG ++ T+ V +NL V A ++GV++ LF+ S+
Sbjct: 69 VVLAAAK--------VGGIMANSTYPVQFLE--ENLQIQLSVIAGAHAAGVERLLFLGSS 118
Query: 189 GIY-KPADEPPHVEGDVVKP------------DAGHVQVEKYISENFSNWASFRPQYMIG 235
IY K A +P H + + P AG QV Y S+ + + S P + G
Sbjct: 119 CIYPKHAPQPIHEDALLTGPLEPTNQAYALAKIAGITQVRSYRSQYGAAYISAMPTNLYG 178
Query: 236 SGNNKDCE-EWFFDRIVR---------KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
G+N D E +VR + V + GSG HV DL++ L + +
Sbjct: 179 PGDNFDLETSHVLPALVRRFHEAKAEGREEVVLWGSGSPRREFLHVDDLAAACVLLLRSY 238
Query: 286 EAA 288
+ A
Sbjct: 239 DGA 241
>gi|395651883|ref|ZP_10439733.1| NAD-dependent epimerase/dehydratase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 310
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F +R + ++P+ + G G Q + +V+DL S+L AVE E + I N+ +R+ +L+
Sbjct: 194 FTERALARKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPTTEAI-NVGLNRSTSLND 252
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+ A G P+ + + P+ I +A
Sbjct: 253 LIAELGSATGTPLNVTYQAPRQGDIRHSRA 282
>gi|49188285|ref|YP_031538.1| hypothetical protein BAS5301 [Bacillus anthracis str. Sterne]
gi|49182212|gb|AAT57588.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
Length = 290
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 2 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 52 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 103
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 104 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 160
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 161 ENDYTKRLQFYVEHIVRKEPVAV 183
>gi|390938917|ref|YP_006402655.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
gi|390192024|gb|AFL67080.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
Length = 307
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L +L+ G++V ++ G PF I G + +
Sbjct: 6 TGGGGFIGRFLVSDLVKKGYDVIVVDRG--------PSPFVEHQRIKYYVGDVT--NVIQ 55
Query: 144 VGNVVGGVTFDVV---------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+ N++ D+V L N++A + + + + + G+K+F+F+SSA
Sbjct: 56 MNNIMAKHKPDIVIHLAALLADTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSA 115
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSGNN 239
+Y P P E D KP + V KY E +W + RP + G G
Sbjct: 116 SVYHPDTPEPVREEDAGKP-VSYYGVTKYAGELIGSWYYRKGLIDFRALRPTVVFGPGRF 174
Query: 240 K----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+ + +R + V + + N +VRD S L L E
Sbjct: 175 RGPSAEYSSMIIERALNNEKVIVKNPNDR-VNYIYVRDAVSALILLAE 221
>gi|407705605|ref|YP_006829190.1| C4-dicarboxylate anaerobic carrier [Bacillus thuringiensis MC28]
gi|407383290|gb|AFU13791.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis MC28]
Length = 328
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|52142303|ref|YP_084525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
E33L]
gi|301054729|ref|YP_003792940.1| NAD dependent epimerase/dehydratase [Bacillus cereus biovar
anthracis str. CI]
gi|423551055|ref|ZP_17527382.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
gi|51975772|gb|AAU17322.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus E33L]
gi|300376898|gb|ADK05802.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus cereus biovar anthracis str. CI]
gi|401188388|gb|EJQ95456.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
Length = 328
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|427817423|ref|ZP_18984486.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
gi|410568423|emb|CCN16461.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
Length = 307
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ- 213
V + + +D+ V D+ G + ++ SS+ +Y D E ++ G+V
Sbjct: 86 VAIAQTNRRIDST--VIDFCHEIGAR-LVYCSSSSVYGRLDSTEVAESRALERATGYVAE 142
Query: 214 ---VEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
E+ I++ ++A+ R G G + F +R ++ P+ G+G + +
Sbjct: 143 KIWAEEEIAKRLPSYATLRLCAPYGPGQKTRTVLRIFIERALQGAPILYFGTGSREQDFV 202
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
HVRD+++ + A++ P + +FN+ R +T+ + L ++
Sbjct: 203 HVRDIAAAIVAALDRPTV--NGVFNISGGRPITMRELGMLVSR 243
>gi|418058902|ref|ZP_12696865.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
gi|373567579|gb|EHP93545.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
Length = 259
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADTPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|293606526|ref|ZP_06688884.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
gi|292815149|gb|EFF74272.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
Length = 320
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 32/274 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYP-DVLTRTRAELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ V D KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQNHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 V--------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFD 248
+ AG E Y E + + P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A I+N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVTIWGTGTPLREFLYVDDLAKACVMLMEHPDA--EGIYNIGAGK 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A L A+ G IV+ K G K
Sbjct: 243 DISIADLAALVARVVGYQGRIVYDTAKPDGTPRK 276
>gi|218904363|ref|YP_002452197.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
gi|218538882|gb|ACK91280.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
Length = 328
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|229151401|ref|ZP_04279604.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
gi|228631944|gb|EEK88570.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
Length = 326
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFAQGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|229092196|ref|ZP_04223377.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
gi|228691187|gb|EEL44951.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
Length = 326
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|424895811|ref|ZP_18319385.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180038|gb|EJC80077.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 326
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 39/262 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + +GH V++ G ++ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAIAAGHHVSVFNRGLRSAALPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ + D A+ V D G++++ S Q++FISSA +Y +
Sbjct: 55 SAYADLAKANCDVVCQFIAFTPDQVGRDIEVF--------SGHCGQYIFISSASVY---E 103
Query: 196 EPPH-----VEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG-----NNK 240
+PP E + P + Q + E W RP + + +G +
Sbjct: 104 KPPRHYVITEETPAINPYWPYSQAKIACEELLQKSGNLGWTIVRPSHTVRTGLPIMMGDA 163
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D R++ P+ + G G + DL+ + + +AA + IF++ SDRA
Sbjct: 164 DV---MARRMLDGEPIIVAGDGHTPWTLTRSVDLAVPF-VGLFGKQAALNEIFHITSDRA 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
T D + K A+ G+ +IVH
Sbjct: 220 HTWDDIQKTIARLLGVEAKIVH 241
>gi|326202035|ref|ZP_08191905.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
gi|325987830|gb|EGD48656.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
Length = 349
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 56/296 (18%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKKVLI +G + V+G L K L +G E + + D N + + F + +
Sbjct: 2 KKKVLI----TGNNGVLGRNLVKYLHENGRENYELVLFDINQNSSEFSNFQVYKGDIRKK 57
Query: 134 G--KTVWGDPAEVGNVVGG-------VTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFL 183
+ V GD V + G +D++++ L+ A ++G V++F+
Sbjct: 58 EDVEKVIGDIDIVVHCAGASPSYEEAQIYDIIINGTSNLLEC-------AFTTGKVERFV 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWAS-------FRPQY 232
+ISS +Y ++ P E D VKP + ++ E+ +W S RP+
Sbjct: 111 YISSTSVYGVPEKAPIYETDEVKPYDPYNRSKIETERLC----DHWRSKGHCVSVLRPRS 166
Query: 233 MIGS---GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+G G EW R P+ G G + V DL + LA+ +
Sbjct: 167 FLGPERLGTFGILYEW----ASEGRNFPMLGPGKNKYQLLDVEDLCQAIYLAISVDANNA 222
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
+++FN+ + T+ + AAG +I K FP + M FI
Sbjct: 223 NDLFNIGAKEFSTIKDDYQSVLDAAGFNKKI-------------KCFPAKPMFFIL 265
>gi|118478511|ref|YP_895662.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196042963|ref|ZP_03110202.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225865160|ref|YP_002750538.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|376267079|ref|YP_005119791.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
gi|118417736|gb|ABK86155.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196026447|gb|EDX65115.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225788004|gb|ACO28221.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|364512879|gb|AEW56278.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
Length = 328
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|386740549|ref|YP_006213729.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 31]
gi|384477243|gb|AFH91039.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 31]
Length = 327
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLIEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTKDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + K C G P+
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPI 269
>gi|443289722|ref|ZP_21028816.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
gi|385887337|emb|CCH16890.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
Length = 336
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
Query: 179 VKQFLFISSAGIYKPADEP------PHVEGDVVKPDAGHVQV----EKYISENFSNWASF 228
V F+++SS +Y P P +GD D + Q+ E+ + E F N A
Sbjct: 88 VGHFVYVSSGSVYADPVAPGSDETAPVADGDPDAVDGDYQQLKAGAERAVREVFENRALI 147
Query: 229 -RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
R ++G G + W+ +RI R V PG VRDL+S + ++ E
Sbjct: 148 ARAGLILGPGEDIGRLPWWLNRIARGGDVLAPGPAELPIQCIDVRDLASWM---LDQGER 204
Query: 288 ASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 338
FN VS T+ + C G + DP+ AAG++ P
Sbjct: 205 GQGGTFNAVSRPGHSTMGELLDECVAVTGSDARLRWIDPESILAAGVEPWNELPI 259
>gi|431792678|ref|YP_007219583.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782904|gb|AGA68187.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 306
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
KVL+ +G +G L KEL GH EV + G+EN + + + +
Sbjct: 3 KVLV----TGSKGTLGTRLVKELQERGHEVWEVDLRHAGEENYFRADIAKYRQLERVFEQ 58
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
V+ AE G + G +D + + N+ R + +W G + +F SS+ IY
Sbjct: 59 DYDVVYHLAAEFGRINGEHYYDTLWE---ANVIGTRNILEWQLKKGFR-LIFTSSSEIYG 114
Query: 193 PADEP 197
A EP
Sbjct: 115 EATEP 119
>gi|305680991|ref|ZP_07403798.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266]
gi|305659196|gb|EFM48696.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266]
Length = 342
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 51/296 (17%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
K K ++ +GG +G A LL GH++TI+ D NR + V A
Sbjct: 8 RKAKTIMKLLVTGGAGYVGSVCATVLLEQGHDITIV-------DNFSTG--NR--DAVPA 56
Query: 133 GGKTVWGDPAEV-GNVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AK 175
+ GD +V G+V+ G FD V+ ++L RP W +
Sbjct: 57 NATLIEGDIRDVAGDVLAGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMR 116
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------S 227
+ GV +F S+A Y D P E P + + I +++A S
Sbjct: 117 NHGVTNLVFSSTAATYGEPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGATS 176
Query: 228 FRPQYMIGS----GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVR 272
R + G+ G N++ E +++ + + I G G + H++
Sbjct: 177 LRYFNVAGAYGSVGENREVETHLIPLVLQVALGHRDEIFIFGDDYPTKDGTCIRDYIHIK 236
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
DL+ LA+E+ + IFNL S ++ + C + G P+ + D +A
Sbjct: 237 DLADAHVLALESNTPGTHRIFNLGSGDGYSVKEVIDKCREVTGHPIPVTMADRRAG 292
>gi|49478089|ref|YP_037324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49329645|gb|AAT60291.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 328
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|392942779|ref|ZP_10308421.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
gi|392286073|gb|EIV92097.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
Length = 330
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 16/198 (8%)
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+TV GD + + G FD+V+D G + VR D A V +++++SS +
Sbjct: 52 ETVLGDRTRDLSALAGRRFDIVVDVAGYDPPVVRRAVD-ALRGRVDRYVYVSSLSVLADQ 110
Query: 195 DEPPHVEGDVVKPD----------AGHVQVEKYISENFSNWASF-RPQYMIGSGNNKDCE 243
P + +G +++ D A E+ + + F A RP ++G + D
Sbjct: 111 STPQNEDGALLELDDDTAPEKLYGARKAACERLVRDAFGAQALIVRPGLIVGPHDPTDRF 170
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ R R V +PG VRDL+S + +V + +FN V+ +
Sbjct: 171 AYWPRRFARGGRVLLPGDPRDLAQFIDVRDLASWIVRSVTS---GVGGVFN-VTGSPLPF 226
Query: 304 DGMAKLCAQAAGLPVEIV 321
C AG P V
Sbjct: 227 GAFFDACQAHAGTPATAV 244
>gi|356960110|ref|ZP_09063092.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium SCGC
AAA001-B15]
Length = 337
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 56/248 (22%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE----NSDKMKKPPFNRFNE 128
+ KKVL+ +GG +IG L + LL G +VT++++ D + + K FN
Sbjct: 5 QNKKVLV----TGGTGLIGVPLVEMLLNQGADVTVVSLDDSSRCPDGAQFKHADLRDFNT 60
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP-------------VADWAK 175
+ V F +V + A RP + + A+
Sbjct: 61 CIEVCANQ-------------EVVFQLVGIKGSPKMCAERPASFFVPTITFSFNMMEAAR 107
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVK-------------PDAGHVQVEKY-ISEN 221
+GV+ +LF SS G+Y+PAD E DV K +Q E Y I
Sbjct: 108 RAGVECYLFTSSIGVYEPAD--IFREDDVWKTFPSPNDRFAGWAKRMAELQAEAYKIEYG 165
Query: 222 FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRK-----RPVPIPGSGMQFTNIAHVRDLS 275
+ + RP + G +N D ++R+ P+ + G G + H +D++
Sbjct: 166 WDRISIVRPANVYGPYDNFDPNNAMVIPSLIRRALEGESPLTVWGDGSSVRDFIHAKDVA 225
Query: 276 SMLTLAVE 283
+ +AVE
Sbjct: 226 RGMMMAVE 233
>gi|300858637|ref|YP_003783620.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41]
gi|375288816|ref|YP_005123357.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 3/99-5]
gi|379715516|ref|YP_005303853.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 316]
gi|384504820|ref|YP_005681490.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002]
gi|384506914|ref|YP_005683583.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231]
gi|384511093|ref|YP_005690671.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis PAT10]
gi|387136743|ref|YP_005692723.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis
42/02-A]
gi|387138815|ref|YP_005694794.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387140807|ref|YP_005696785.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850567|ref|YP_006352802.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 258]
gi|392400750|ref|YP_006437350.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis Cp162]
gi|300686091|gb|ADK29013.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41]
gi|302206346|gb|ADL10688.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231]
gi|302330903|gb|ADL21097.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002]
gi|341825032|gb|AEK92553.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis PAT10]
gi|348607188|gb|AEP70461.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis
42/02-A]
gi|349735293|gb|AEQ06771.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355392598|gb|AER69263.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1/06-A]
gi|371576105|gb|AEX39708.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 3/99-5]
gi|377654222|gb|AFB72571.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 316]
gi|388247873|gb|AFK16864.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 258]
gi|390531828|gb|AFM07557.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis Cp162]
Length = 327
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLIEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + K C G P+
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPI 269
>gi|168006662|ref|XP_001756028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692958|gb|EDQ79313.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKA 327
HV+D++ M + V E A +I+N+ + VT +G+AK A A G PV V Y+PK
Sbjct: 115 GHVKDMA-MAFVTVLGNEKAYGHIYNINDAKNVTFNGIAKASAIADGSPVPRTVQYNPKD 173
Query: 328 AGIDAKKAFPFRNM 341
KKAF R+
Sbjct: 174 FDFSKKKAFSLRDQ 187
>gi|258653358|ref|YP_003202514.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM
44233]
gi|258556583|gb|ACV79525.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM
44233]
Length = 342
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 86 GHAVIGF---YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
GH V+G + L G + T++T+ D++ ++ F+ IV + DP
Sbjct: 24 GHDVVGLDTGFFKSGWLYRGTDRTVLTL-DKDVRSVQAEDLVGFDAIVHMA--ELSNDP- 79
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+G+++G VT+DV N +A AKS+GV++F+ +SS +Y AD E
Sbjct: 80 -LGDLLGDVTYDV-------NHKGTLRLATLAKSAGVQRFIHMSSCSVYGVADGVVD-ES 130
Query: 203 DVVKPDAGHVQVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEWFFDRIVRKRP----- 255
+ P + + + + S A +F P +M + FD ++
Sbjct: 131 SPINPQTAYADCKALVERDVSALADDAFSPTFMRNATAFGASPRMRFDIVLNNLAGLAHT 190
Query: 256 ---VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFNLVSD 298
+ + G + + H D+ + A+E P N +FN+ S+
Sbjct: 191 TGRISMTSDGTPWRPLVHAMDIGKAIRCALEAPRDVVHNEVFNVGSN 237
>gi|150399165|ref|YP_001322932.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
gi|150011868|gb|ABR54320.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
Length = 319
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGHVQVEKY---ISENFSN- 224
+ + AK G+K+ +F SS+ +Y ++ P +E D V KP + + +KY I+ +++
Sbjct: 111 IFELAKKYGIKRVIFASSSSVYGGNEKTPFLESDNVDKPVSLYAATKKYNELIAHVYNHL 170
Query: 225 ----WASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
R + G D W F + I+ ++P+ + G + ++ D+ +
Sbjct: 171 YGIEMIGLRFFTVYGEFGRPDMAYWKFTKNILEEKPIDVYNYGKMKRDFTYISDIVEGIK 230
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
AV + IFNL D + L+ M L + G
Sbjct: 231 SAVFLSKKIDYEIFNLGGDNPIELEYMISLIEKETG 266
>gi|332706591|ref|ZP_08426652.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332354475|gb|EGJ33954.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 352
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 180 KQFLFISSAGIYKPADEPPHVE------GDVVKPDA--GHVQVEKYISENFSNWASFRPQ 231
++F+ +S+ G++ + PP E GD+ + G + + + + RP
Sbjct: 118 QRFVHVSTIGVHGHVENPPGDENCPMHPGDIYQETKLEGELWIRDFAKKEGLPVTVVRPS 177
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G + + + ++V ++ +PI G+G ++ HV DL++ L+ +P+A
Sbjct: 178 GIYGPGEKRFLKIF---KMVGRKWIPIIGNGSNLLHLIHVDDLTNFFILSATHPQAV-GE 233
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+F S A+T M + ++ G+ + +
Sbjct: 234 VFICGSKEAITFQKMVSIISEYYGISFKFI 263
>gi|296117740|ref|ZP_06836324.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306]
gi|295969471|gb|EFG82712.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306]
Length = 329
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A L+ +GHEVTI+ D NR E V A V GD A
Sbjct: 6 TGGAGYVGSVCAATLVEAGHEVTII-------DNFSTG--NR--EAVPAQATLVEGDVAN 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
VG+V+G FD V+ ++L P W +++ V +F S
Sbjct: 55 VVGDVLGQGGFDGVVHFAARSLVGESVAMPAEYWQHNVVTTLTLLEAMRANDVSNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA----SFRPQYMIGS-- 236
+A Y +E P E +P A + ++ I+ + S R + G+
Sbjct: 115 TAATYGEPEEVPITESMPTQPTNPYGASKLAIDYMITSYAKAYGFGATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + HVRDL+ LA+E
Sbjct: 175 EIGENREVETHLIPIILQVALGHRDKIFIFGDDWDTVDGTAVRDYIHVRDLADAHLLALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ IFNL S ++ + + C + G P+
Sbjct: 235 ANVSGEHRIFNLGSGDGYSVKQVIETCREVTGHPI 269
>gi|383640403|ref|ZP_09952809.1| reductase [Streptomyces chartreusis NRRL 12338]
Length = 329
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 36/273 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + LG G EVT+ G + + PP R G ++ G PA +
Sbjct: 3 GGTEFVGRAVVEAALGRGWEVTVFHRG-----RHEAPPGVRS----LLGDRSTPGGPAAL 53
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------PADEPP 198
G +DVV+D AVR A ++++++SS +Y ++ P
Sbjct: 54 AEDPG--EWDVVVDTWSAAPRAVRDAAR-LLRGRARRYVYVSSCSVYAWPRSAGHGEDAP 110
Query: 199 HVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
VEG + G + V E+ S R ++G N W+ R
Sbjct: 111 LVEGASADAEQTAYAQDKRGGELAVLDAFGEDRS--VLVRAGLILGPYENIGRLPWWLGR 168
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
+ R PV PG VRDL+ + A E S +NLVS + T+ +
Sbjct: 169 MARGGPVLAPGPRELALQYVDVRDLAEWVLHASER---ELSGPYNLVSPQGHTTMGELLD 225
Query: 309 LCAQAAGLPVEIVHYDPKA---AGIDAKKAFPF 338
CA+ G E+ +P+ AGI P
Sbjct: 226 TCARVTGGAAELRWTEPEVILRAGIQPWTELPV 258
>gi|240138623|ref|YP_002963095.1| UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
gi|240008592|gb|ACS39818.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
Length = 307
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADTPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|414157729|ref|ZP_11414025.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
gi|410871647|gb|EKS19594.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
Length = 326
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPREFRSLIEETLRGLGYPI 249
>gi|387879545|ref|YP_006309848.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
gi|386792998|gb|AFJ26033.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
Length = 325
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 56/294 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-----------------KPPFNRF 126
+G +G Y+ ELL + + ++N ++ + F
Sbjct: 6 TGATGFLGKYVIDELLAHDYSIVAFGRNEKNGKALENDRVQFMKGDLSAIEELRQAFQSV 65
Query: 127 NEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+ +V AG T WG NVVG + V D + VK+ +
Sbjct: 66 DAVVHAGALSTAWGPWKAFYQANVVG-----------------TQNVLDLCREYAVKRLV 108
Query: 184 FISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQYM 233
++SS IY + ++ E D P H+ K SE FS+++ RP+ +
Sbjct: 109 YVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLFSDYSDVPSIILRPRGL 166
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G G+ R+ RK +P+ G Q ++ V +++ + LA+E E A ++
Sbjct: 167 FGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKE-AHGQVY 223
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY 347
N+ + T + + + G P+ Y AG+ A A+ V+ FF+
Sbjct: 224 NITNGEPKTFKYLIETTLKGLGEPIR---YRKIPAGLVAGVAYSLEG-VYRFFH 273
>gi|300710359|ref|YP_003736173.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448294683|ref|ZP_21484762.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299124042|gb|ADJ14381.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445586360|gb|ELY40642.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 289
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 40/276 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+ +GG IG +L +L GH+VT + + S R ++ G
Sbjct: 2 KVLV----TGGTGFIGRHLCAKLAQRGHDVTALARSPDASSLPADVAVER-GDVTDRGTL 56
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAG 189
G VV V + + G+ +LD R V D A+++GV + + +S+ G
Sbjct: 57 DFAGQDV----VVNLVALSPLFEPKGEKTHESVHLDGTRNVVDAAEAAGVSRLVQMSALG 112
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P ++ + E+ + + +W FRP + G G F
Sbjct: 113 -ADPDGPTAYIR--------AKGKAERVVEASELDWTIFRPSVVFGDGGE-------FVE 156
Query: 250 IVRKR--PV--PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
RK PV P+PG G V D++S+L AVE+ E + + +T+
Sbjct: 157 FTRKLTPPVIAPLPGGGRTRFQPIWVEDIASLLADAVED-ERHVGETYEIGGPEVLTMAE 215
Query: 306 MAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPF 338
+AKL ++ G +P+ + +A ID PF
Sbjct: 216 VAKL-SRGGGVTVVPIPMAFAKIGSAAIDPLPFIPF 250
>gi|406880632|gb|EKD28932.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 353
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 116/282 (41%), Gaps = 61/282 (21%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HE-------------VTIMTVG 111
++KK V I +G IG Y+ KE + +G H+ ++++ G
Sbjct: 4 SKKKYVFI----TGATGFIGSYVVKEFIQNGWIVAALIHKTSSTELDILAQKGISVLFYG 59
Query: 112 D---ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDA 166
D ENS N N+++ +G P EV G DV D K N D+
Sbjct: 60 DVSHENS------LINVMNQMLKE-----FGTPPEVIVHCAGRASDVGRDTEFKRNNFDS 108
Query: 167 VRPVADWAKSSGVKQFLFISSAGIY------KPADEPPHVEGDVVKPDAGH-VQVEKYIS 219
VR + W + +K+F+F+S+ +Y +E E P + + EK++
Sbjct: 109 VRFIGQWVLKNNIKRFIFVSTTDVYGLRNFNHEREEELSFEKKSWNPYPKYKIAAEKWLI 168
Query: 220 ENF--SNWASFRPQYMIGSGNNKDCEEWFFDRI---VRKRPVPIPGSGMQFTN---IAHV 271
EN + RP + G G+ RI +R P I ++ N +AHV
Sbjct: 169 ENLPSEKYVIIRPAAVWGVGDKT-----LIPRILNFIRMSPFIIHFGYLKGKNRWPLAHV 223
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
+++++++ LA PE ++ +++ + T D ++ +
Sbjct: 224 KNVATVIYLAAMLPEMTGISL-HVLDEEYTTSDEFYRMLIRV 264
>gi|229122755|ref|ZP_04251964.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
gi|228660619|gb|EEL16250.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
Length = 306
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 66 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 125
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 126 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 183
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 184 NVVDALLLCMHSPKHTLGQKYNITNDERINL 214
>gi|229185434|ref|ZP_04312616.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
gi|228598022|gb|EEK55660.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
Length = 326
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + +K G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 86 NVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFVHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|329120909|ref|ZP_08249541.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965]
gi|327471368|gb|EGF16819.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965]
Length = 306
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 108/293 (36%), Gaps = 52/293 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVW 138
+GG IG +LA L+ H VTI+ D + +FN E + A +T
Sbjct: 6 TGGAGFIGSHLADALIKLNHNVTII-------DNLSSGT--KFNVPSEAEFIEADIRT-- 54
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
+ + N+ FD+V + N+ + V + + +GVK+
Sbjct: 55 ---SSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLESCRQTGVKKI 111
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WASFRPQYMI------ 234
+F SSA +Y P E + + P + + + K SE + N + F Y I
Sbjct: 112 IFSSSAAVYGNNSNLPLSENESLSPTSFY-GLTKTTSEKYLNLYYEYFGIHYTILRYSNV 170
Query: 235 -----GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G+ F + +P+ I G G Q + V D+ A+ N +
Sbjct: 171 YGPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAITN---GN 227
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMV 342
I N+ ++ TL+ +A + ++HY G + +N V
Sbjct: 228 EKILNISTETETTLNELANKMINLSKKDKNLIHYKKPRNGDIYRSCLSNKNAV 280
>gi|448739571|ref|ZP_21721583.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
gi|445799190|gb|EMA49571.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
Length = 352
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 99/255 (38%), Gaps = 35/255 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL SG+ VT+ G ++ PF E V G +T D
Sbjct: 35 GGTRFIGRHTVTELLDSGYGVTVFNRGTHDN------PFGEHVEHVE-GDRTERADLERA 87
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V D V + G+ A+ D +++ ISS Y ++E P EG+
Sbjct: 88 AERDPDVVVDCVAYHPGEVRTAIELFDD-------SRYVVISSGAAYG-SEEIPKREGET 139
Query: 205 VKPDAGHVQ---------------VEKYISENFSNWA---SFRPQYMIGSGNNKDCEEWF 246
D Q +++ +S+ ++ S RP + G + + +++
Sbjct: 140 ALHDCTAEQATDDSQETYGPRKAEIDRVVSDAAAHGVEAMSVRPPVVYGPHDYTERFDYW 199
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ V +PG G ++ V D++ L + E E +N+ R L
Sbjct: 200 LDRVDNHDRVLVPGDGDCLRHLVFVEDVARALRIVAE--EGTPGAAYNVGDRRLPILSEW 257
Query: 307 AKLCAQAAGLPVEIV 321
+L A A V+IV
Sbjct: 258 IELVADALDTEVDIV 272
>gi|322703159|gb|EFY94773.1| reductase [Metarhizium anisopliae ARSEF 23]
Length = 322
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 45/227 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG G + A+E + GH+VT+ FNR AG
Sbjct: 2 KMLIL----GGTKFAGLHTAREAVSKGHDVTL---------------FNRGTRPPPAGVT 42
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
+ GD + G+ FDV +D + AV+ D A V+ +++IS+ +Y
Sbjct: 43 SKLGDRLAPNGYASLAGLAFDVAIDTWSSDPAAVQSAVD-ALGPRVRHYIYISTISVYDF 101
Query: 193 -----PADE--PPHVEGDVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNK 240
P DE P GD D +++ +K E + A RP ++G
Sbjct: 102 KRGAVPHDESTPSWDPGDT---DVPYIR-DKLAGEAIVSGAGPAHTLIRPGVILGPEEWV 157
Query: 241 DCEEWFFDRIVRKRPVPIPG---SGMQFTNIAHVRDLSSMLTLAVEN 284
W+ R+ R PG SG+QF + VRDL++ LA E
Sbjct: 158 WRLPWWLLRMERGGRTLAPGPRASGLQFID---VRDLAAFTVLAAEK 201
>gi|423581301|ref|ZP_17557412.1| hypothetical protein IIA_02816 [Bacillus cereus VD014]
gi|401216066|gb|EJR22781.1| hypothetical protein IIA_02816 [Bacillus cereus VD014]
Length = 341
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 51/291 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S++ + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISHYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ EN A +
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAGT-- 218
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
FN+ S + +T++ + C + E V + + ++ K P+ M
Sbjct: 219 -FNVTSPNYDLTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEM 266
>gi|312866557|ref|ZP_07726772.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
gi|311097856|gb|EFQ56085.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
Length = 325
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 60/296 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------------------DENSDKMKKPPFN 124
+G +G Y+ ELL H+ TI+ G D +S + + F
Sbjct: 6 TGATGFLGKYVIDELLA--HDYTIVAFGRNEKIGKALESERVQFIKGDLSSIEELRQAFQ 63
Query: 125 RFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ +V AG T WG NVVG + V D + VK+
Sbjct: 64 SVDAVVHAGALSTAWGPWKAFYQANVVG-----------------TQNVLDLCREYAVKR 106
Query: 182 FLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQ 231
+++SS IY + ++ E D P H+ K SE FS++ RP+
Sbjct: 107 LVYVSSPSIYAAGKDQLNIKESDA--PTENHLNNYIRSKLASEKLFSDYPDVPSIILRPR 164
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G+ R+ RK +P+ G Q ++ V +++ + LA+E + A
Sbjct: 165 GLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKD-AHGQ 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY 347
++N+ + T + + + G P + Y AG+ A A+ V+ FF+
Sbjct: 222 VYNITNGEPKTFKYLIETTLKGLGEP---IRYRKLPAGLVAGAAYSLEE-VYRFFH 273
>gi|148545786|ref|YP_001265888.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
gi|148509844|gb|ABQ76704.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
Length = 310
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R+V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERVVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|254561221|ref|YP_003068316.1| UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
gi|254268499|emb|CAX24456.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
Length = 307
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|423438847|ref|ZP_17415828.1| hypothetical protein IE9_05028 [Bacillus cereus BAG4X12-1]
gi|401115974|gb|EJQ23820.1| hypothetical protein IE9_05028 [Bacillus cereus BAG4X12-1]
Length = 290
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G YL + LL GH+VTI T G D ++K+ +R
Sbjct: 2 KKVLVL----GGTRFFGKYLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 52 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 103
Query: 192 KPA 194
+PA
Sbjct: 104 EPA 106
>gi|258514597|ref|YP_003190819.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778302|gb|ACV62196.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
Length = 301
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
+G TF+++ N++ R + + A++SGV QFL +S+ G D P V K
Sbjct: 77 IGEDTFELI------NVEGTRNLVEAAENSGVSQFLHLSALG---ACDNP------VYKY 121
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI---VRKRP--VPIPGSG 262
Q E+++ + NW RP + G G F DR+ V P VP+PG G
Sbjct: 122 AYSKWQGEEFVKNSKLNWVILRPSVIYGEGFG------FMDRMLQSVNMTPPWVPVPGRG 175
Query: 263 MQFTNIAHVRDLSSMLTLAVEN 284
V DL + + A+ N
Sbjct: 176 KTLFQPISVHDLVNCIIKALIN 197
>gi|417794063|ref|ZP_12441326.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
gi|334271173|gb|EGL89567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
Length = 326
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLARACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 VGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|452750431|ref|ZP_21950180.1| epimerase [Pseudomonas stutzeri NF13]
gi|452005688|gb|EMD97971.1| epimerase [Pseudomonas stutzeri NF13]
Length = 309
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 46/268 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG L LL G+ V ++ + ++ K + P N E++ GD A+
Sbjct: 9 TGGAGFIGSNLVDALLARGYAVRVLD--NLSTGKRENLPQNPRVELI-------VGDVAD 59
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
G V V + D + NL + + + +GVK+ LF S
Sbjct: 60 AGCVRRAVQGCRAVVHLAAVASVQASVDDPFATHQSNLIGTLNLCEAMREAGVKRVLFAS 119
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ + K V+K SE++ ++ +R Q+ + G
Sbjct: 120 SAAVYGNNGEGHAIDEETPKAPLTPYAVDKLASEHYLDF--YRRQHGLEPVIFRFFNIFG 177
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E PEA
Sbjct: 178 PRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVADLVEVLVQALEAPEAVEG 237
Query: 291 NIFNLVSDRAVTLDG-MAKLCAQAAGLP 317
+ N+ ++A +L+ +A + GLP
Sbjct: 238 AV-NVGLNQATSLNQLLAAIGDVLGGLP 264
>gi|406676213|ref|ZP_11083399.1| hypothetical protein HMPREF1170_01607 [Aeromonas veronii AMC35]
gi|404626436|gb|EKB23246.1| hypothetical protein HMPREF1170_01607 [Aeromonas veronii AMC35]
Length = 332
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 107/277 (38%), Gaps = 34/277 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
++ + + +D+V+D + ++ A + +FIS+ +Y+
Sbjct: 53 SL------IALQGASLQWDLVIDTCCYRPEQAASLSA-ALLERCARLIFISTISVYRDFS 105
Query: 196 EPPHVEGDVVKP--------DAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCEE 244
P E ++ D G ++V ++Y + RP + G +
Sbjct: 106 LPGMDESAPLQAIPEGEMPTDYGPLKVLCEQEYRARWGERLCILRPGVLCGPHDPTGRMA 165
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
W+ R+ + P +PGSG VRD + + A E + FNL+ D
Sbjct: 166 WWIKRVQQGGPWLLPGSGEDRLQYLDVRDCAEFVLRAAEQQLGGT---FNLLKPGITLCD 222
Query: 305 GMAKLCAQAAG----LPVEIVHYDPKAAGIDAKKAFP 337
+ +L A+ LP + AAGI+ +++P
Sbjct: 223 WLERLSARLQPARPILPEWLPWSTLMAAGIEPWQSYP 259
>gi|313683518|ref|YP_004061256.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
gi|313156378|gb|ADR35056.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
Length = 312
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS--ENFS 223
+ ++A G+ +F++ S+ IY D+ P E P + + + E+Y+ +
Sbjct: 100 LLNFAVEEGIGRFIYASTMSIYGDVDDKPIRENQAKNPKSYYGITKLAAEQYVRVFSDRL 159
Query: 224 NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
N SFR + G G N + + +R PV + G ++ ++ ++ D+ +
Sbjct: 160 NTTSFRLFNVYGPGQNMANLKQGMVSIYLAYFMRNEPVIVKGFKERYRDLTYIDDVVDVW 219
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
T +++NP +NL + + T++ + A G P +++ G
Sbjct: 220 TASIDNP-LTYGKTYNLATGKKTTVEALLNELKTAWGSPEYPIYFTEGTPG 269
>gi|393767323|ref|ZP_10355872.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
gi|392727224|gb|EIZ84540.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
Length = 306
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 158 DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGH----V 212
D N +A R +A+ A + V++F+F+SS A P V EGD +P + +
Sbjct: 84 DYRTLNTEATRKLAEAAARAKVRRFVFLSSIRAQVGASAPGVVGEGDEPRPTDAYGRSKL 143
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
+ E+ ++E +W + RP + G+G + R+ R P P+P G+
Sbjct: 144 EAERALAETGLDWVALRPVLVYGAGVKGNMAALL--RLARS-PYPLPLGGL 191
>gi|424881277|ref|ZP_18304909.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517640|gb|EIW42372.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 317
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 51/261 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TVWGDPA------EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D A + G V GV D+V+D L++ + A S V FL +
Sbjct: 51 QL--DRAAMERTGDFGQAVRGVKADIVIDMICFTLESAEHLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMI 234
+ + P +E GD A +E Y+ + A R P +++
Sbjct: 108 THGHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIV 160
Query: 235 GSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
G G N + + F + R + +P G++ + H D+++M A+ N A
Sbjct: 161 GPGWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNA 218
Query: 288 ASSNIFNLVSDRAVTLDGMAK 308
++ F+ VS++A+TL G A+
Sbjct: 219 STGESFHAVSEQALTLRGYAE 239
>gi|423387511|ref|ZP_17364764.1| hypothetical protein ICE_05254 [Bacillus cereus BAG1X1-2]
gi|401628363|gb|EJS46208.1| hypothetical protein ICE_05254 [Bacillus cereus BAG1X1-2]
Length = 307
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLINV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQICNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E S+ R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASDSLKVRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E FN+ +++ ++++ +A
Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGEKFADFNVGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|46389927|dbj|BAD15711.1| unknown protein [Oryza sativa Japonica Group]
Length = 72
Score = 45.8 bits (107), Expect = 0.033, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
Query: 233 MIGSGNNKDCEEWFFDRIVRKRP------VPIPGSGMQFTN 267
MIGSGNNKDCEEWFFD + + P +P P + + F+N
Sbjct: 1 MIGSGNNKDCEEWFFDSKITQIPPTKFSQIPYPHTKI-FSN 40
>gi|403529234|ref|YP_006664121.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
sp. Rue61a]
gi|403231661|gb|AFR31083.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter sp. Rue61a]
Length = 330
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 33/249 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE- 143
GG IG +L L+ +GHEV N + PP+ E T D E
Sbjct: 13 GGSGHIGSFLVPRLVRAGHEVI-------NVSRGSSPPYADVPEWQQVRQVTADRDHEER 65
Query: 144 ---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
G+ V + DVV+D L++ + + ++ + L S + + + P
Sbjct: 66 EGSFGDRVAALGADVVVDLICFTLESATALVESLRNQ-TEHLLHCGSIWRHGVSLKLPIA 124
Query: 201 EGD-----------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDC 242
EG + K D + E+ + + S P +++G G N D
Sbjct: 125 EGTESAAEPLDQYGIRKRDIAGMLKEETAAGGLAT-TSIHPGHIVGPGWLPIGPLGNLDP 183
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W I +P+ +PGSG + + H D++ A+ + +AA+ FN+V+ A+T
Sbjct: 184 GVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFEKAILHRDAAAGEDFNIVAPTALT 241
Query: 303 LDGMAKLCA 311
+ G + +
Sbjct: 242 VRGYVSIAS 250
>gi|391231675|ref|ZP_10267881.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
gi|391221336|gb|EIP99756.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
Length = 317
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 115/295 (38%), Gaps = 51/295 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+K L+ +GG IG +L + LL +G EV ++ D + + + + G
Sbjct: 9 RKALV----TGGAGFIGGHLVRTLLEAGTEVVVL-------DNFRTGSPDNLAGLPAPGV 57
Query: 135 KTVWG---DPAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSS 177
+ V G D A V + V G + + + + N+ + V + A ++
Sbjct: 58 RLVRGCITDRATVRDAVQGCDAVFHLAALVSVPESMERIHECVTLNVTGLLTVLEEAAAA 117
Query: 178 GVKQFLFISSAGIY------------KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 225
G ++ + SSA IY +PA + P+ + K D G + +
Sbjct: 118 GARKLVLSSSAAIYGDDPEVPKREDMRPAPKSPYA---ITKLD-GEYYCALFAAAGRIET 173
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
AS R + G N D F R + +PV I G G Q + +VRD+ +
Sbjct: 174 ASLRYFNVFGPRQNPDSAYAAAVPIFIRRALAGQPVAIHGDGGQTRDFVYVRDVVAANLF 233
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
A A + +FN+ ++T+ +A+ G IVH P+ + +A
Sbjct: 234 AART--AGLTGVFNVGYGGSLTILELAQRIIAQTGSASRIVHEAPRPGDVRHSRA 286
>gi|298385502|ref|ZP_06995060.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
gi|298261643|gb|EFI04509.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
Length = 338
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTSGFPI-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|419800059|ref|ZP_14325370.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
gi|385696428|gb|EIG26916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
Length = 325
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 38/248 (15%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD ++ + + F + +V AG T WG NVVG
Sbjct: 50 GDLSAIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-F 222
+ V D + VK+ +++SS IY + ++ E D P H+ K SE F
Sbjct: 93 QNVLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S+++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVASAAYS 264
Query: 338 FRNMVFIF 345
+ +F
Sbjct: 265 LEGVYRLF 272
>gi|187779689|ref|ZP_02996162.1| hypothetical protein CLOSPO_03285 [Clostridium sporogenes ATCC
15579]
gi|187773314|gb|EDU37116.1| NAD dependent epimerase/dehydratase family protein [Clostridium
sporogenes ATCC 15579]
Length = 728
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 39/254 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK----KPPFNRFN------EIVSAG 133
+GG+ IG ++ + G+EV I + + +S K++ K F F+ E V
Sbjct: 6 TGGYGFIGSHVVERFAKEGYEVFI--IDNMSSGKLENVNCKHKFYEFDVEDKRCEFVFKN 63
Query: 134 GK--TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V A++ NV+ + D LD N+ + + + + VK+F+F SSA IY
Sbjct: 64 NNFDIVVHLAAQI-NVITSLE-DPFLDTKT-NILGLVNMLELSTKYKVKKFIFASSAAIY 120
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNW--------ASFR-------PQYMIG 235
+ P E ++ +P + + + KY+ E + W FR Q +IG
Sbjct: 121 GNNENIPLTEKEIAEPLSPY-GISKYVGEGYCKKWNEIYSLDTICFRFSNVYGPRQGIIG 179
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G F D I + + + + G G Q + +V DL+ L A E+ S ++NL
Sbjct: 180 EGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAAESN--ISFGVYNL 234
Query: 296 VSDRAVTLDGMAKL 309
++ +L+ + K+
Sbjct: 235 STNSRSSLNNLIKI 248
>gi|398925595|ref|ZP_10661969.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
gi|398171956|gb|EJM59844.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
Length = 309
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 107/276 (38%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLAGEHYFDF--YRRQHGLEPVIFRFFNIYGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEDGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPS--VSYGPARSG 275
>gi|283778335|ref|YP_003369090.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
gi|283436788|gb|ADB15230.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
Length = 328
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE----GDVVKP----------- 207
N++A + + A+ V+QFLF SS+ +Y P E G+ V P
Sbjct: 105 NIEATLVLLELARQHRVEQFLFASSSTVYGSGAAAPFAEDAPMGNPVSPYGVSKRAAEQL 164
Query: 208 --DAGHVQVEKYISENFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
+ H+ ++S F N RP+ + + F I+R P+ + G G
Sbjct: 165 GFNYHHLYQIPFVSLRFFNAYGIRIRPELALAA---------FTRAILRGEPLKLFGDGS 215
Query: 264 QFTNIAHVRDLSSMLTLAVENPE---AASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ HV D++ L +E+P A + FNL S +T+ + + AAG
Sbjct: 216 ALRDFTHVTDIAQGLLQTLEHPHFATAVAGEAFNLGSCAPITVRQLIDMIEAAAG 270
>gi|119961604|ref|YP_949736.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
aurescens TC1]
gi|119948463|gb|ABM07374.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter aurescens TC1]
Length = 324
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 33/249 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE- 143
GG IG +L L+ +GHEV N + PP+ E T D E
Sbjct: 7 GGSGHIGSFLVPRLVRAGHEVI-------NVSRGSSPPYADVPEWQQVRQVTADRDHEER 59
Query: 144 ---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
G+ V + DVV+D L++ + + ++ + L S + + + P
Sbjct: 60 EGSFGDRVAALGADVVVDLICFTLESATALVESLRNQ-TEHLLHCGSIWRHGVSLKLPIA 118
Query: 201 EGD-----------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDC 242
EG + K D + E+ + + S P +++G G N D
Sbjct: 119 EGTESAAEPLDQYGIRKRDIAGMLKEETAAGGLAT-TSIHPGHIVGPGWLPIGPLGNLDP 177
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W I +P+ +PGSG + + H D++ A+ + +AA+ FN+V+ A+T
Sbjct: 178 GVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFEKAILHRDAAAGEDFNIVAPTALT 235
Query: 303 LDGMAKLCA 311
+ G + +
Sbjct: 236 VRGYVSIAS 244
>gi|296165134|ref|ZP_06847685.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899546|gb|EFG79001.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 880
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP---DAGH-VQVEKYI 218
N+D R V +G + +F SSA +Y D P E D P D H QVE+ +
Sbjct: 85 NIDGTRNVLAAMARTGASRIVFASSAHVYGSGDA-PKTEHDARTPVGADGQHKAQVERML 143
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP----GSGMQFTNIAHVRDL 274
++ W + R +IG + + W +R + +P GS + + H D
Sbjct: 144 EDSDLEWVAIRSALIIG----RSVDNWV------RRLLALPAFPDGSADRLMQVVHPDDA 193
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ A+ +PE S + NL + +T + A A G PV
Sbjct: 194 LRLFNRAIVDPEIGSGPV-NLAAPGELTF----RRIAAALGRPV 232
>gi|288817824|ref|YP_003432171.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384128585|ref|YP_005511198.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|288787223|dbj|BAI68970.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308751422|gb|ADO44905.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
Length = 313
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 48/250 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS---- 131
KVLI +G +G Y+ K LL G EV + N DK+++ + E V
Sbjct: 2 KVLI----TGSTGFVGRYMVKALLNEGFEVASIV---RNLDKLRR----LYGEKVKGYEG 50
Query: 132 -----AGGKTVWGD--PAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKS 176
A + + D P + +++G G+TF V KNL V AK
Sbjct: 51 NFEDKASIRKAFEDFKPDYLIHLIGILYEEKSKGITFHKVHYIYSKNLYQV------AKE 104
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+K+ L +S+ G +K A H Q E+ + + N+ FRP ++G
Sbjct: 105 FDIKKVLHMSALGTHKNAPSSYH---------KTKYQTEQELIKTGLNYTIFRPSIILGP 155
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ W R + R + +P G VRD+ A+++ E + I+ +
Sbjct: 156 EQRLFFDMWSITRYL--RVIALPSGGHYLFQPVDVRDVVCCFLKAIKS-EETNGKIYEVC 212
Query: 297 SDRAVTLDGM 306
D+ V+ +
Sbjct: 213 GDKKVSFKKL 222
>gi|409398039|ref|ZP_11248891.1| epimerase [Pseudomonas sp. Chol1]
gi|409117545|gb|EKM93973.1| epimerase [Pseudomonas sp. Chol1]
Length = 309
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 118/296 (39%), Gaps = 51/296 (17%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIV 130
++ VLI +GG IG L LL G+ V ++ +N K+ P +R IV
Sbjct: 3 ERPVLI----TGGAGFIGSNLVDALLARGYAVRVL----DNLSTGKRSNLPDDSRLELIV 54
Query: 131 SAGGKTVWGDPAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKS 176
D A V + G + D L + NL V + ++
Sbjct: 55 GD-----VADAACVRQALQGCRAVVHLAAVASVQASVDDPLGTHQSNLIGTLNVCEAMRA 109
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
GV++ LF SSA +Y E ++ D K +K SE++ ++ +R Q+ +
Sbjct: 110 EGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADKLASEHYLDF--YRRQHGLEP 167
Query: 237 ---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
G +D F +R + P+ + G G Q + +V DL +L
Sbjct: 168 VVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIVVFGDGEQTRDFVYVGDLVEVLVQ 227
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKA 335
A+E+ EA + N+ RA +L+ + + + GLP + + P+ I +A
Sbjct: 228 ALESSEAVEGAV-NVGLSRATSLNQLLEAIGEVLGGLPA-VTYQAPRPGDIRHSRA 281
>gi|380695552|ref|ZP_09860411.1| mRNA-binding protein [Bacteroides faecis MAJ27]
Length = 338
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMAAYRTTGFPV-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GNN + + RI+ +PV IPG G + H RD +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNNGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSRDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALEKPLNALH 246
>gi|329924722|ref|ZP_08279737.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF5]
gi|328940556|gb|EGG36878.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF5]
Length = 338
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 38/275 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + K+LL G E+ ++ G+ N D + + I+ A D +V
Sbjct: 7 GGTGTISTAITKQLLEQGCELYLLNRGNRN-DTLPEGA-----HILQADIH----DEDQV 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPV---ADWAKSSG-VKQFLFISSAGIYK-PADEPPH 199
++ + FD V D A P D+ +G KQF+FISSA Y+ P +
Sbjct: 57 AKLIEHLDFDAVAD-----FIAFEPAHLERDYRLFAGKTKQFIFISSASAYQTPLSDYRI 111
Query: 200 VEGD-VVKPDAGH----VQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDCEEW 245
EG + P + + E Y+ + + RP + I G + W
Sbjct: 112 TEGTPLSNPYWAYSRNKIACEDYLMKQYREHGFPVTIVRPSHTYDERSIPLGVHGSQGSW 171
Query: 246 -FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
R++ +PV I G G + H RD + + N A ++ ++ SD ++T +
Sbjct: 172 QVVKRMLENKPVLIHGDGTSLWTLTHNRDFAKGFIGLMGNIHAIGESV-HITSDESLTWN 230
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ ++ A A G+ + VH + +DA FR
Sbjct: 231 QIYEIIADALGVQLNAVHVSSEF--LDATSTQDFR 263
>gi|226366203|ref|YP_002783986.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4]
gi|226244693|dbj|BAH55041.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4]
Length = 330
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV + + D ++ P G + + GD E
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVV--IDDLSTGNADAVPL---------GAEFIDGDVGE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VAADVLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTQKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 282
>gi|251796752|ref|YP_003011483.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
gi|247544378|gb|ACT01397.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
Length = 337
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 34/238 (14%)
Query: 123 FNRFNE--IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
FNR N V G K + GD P + FDVV+D + V+ D +
Sbjct: 30 FNRGNRDGFVPEGAKIITGDIRDPESAAAALEDYQFDVVVDWIAFTPEHVQTDIDLFRGR 89
Query: 178 GVKQFLFISSAGIY-KPAD-----------EPPHVEGDVVKPDAGHVQVEKYISENFSNW 225
KQ++FISSA Y KP E P+ + K D + +++Y + F
Sbjct: 90 -TKQYIFISSASAYQKPLQHYIITEHATPLENPYWQYSRDKIDCEQLLMKEYAATGFPV- 147
Query: 226 ASFRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + G S N+ R+ +P+ + G G + H D +
Sbjct: 148 TIVRPSFTYGDTMIPASLNSWSHPYSLVARMREGKPIIVHGDGTSLWTMTHNSDFAKGF- 206
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
+ + + A +++ SD +T + + + AAG+ +VH YDP G
Sbjct: 207 VGLLGEQTAIGEAYHITSDEVLTWNQIYEAIGSAAGVKPNLVHISSEFLITYDPDLEG 264
>gi|188591883|ref|YP_001796481.1| GDP fucose synthetase [Cupriavidus taiwanensis LMG 19424]
gi|170938257|emb|CAP63242.1| GDP-L-fucose synthetase;
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
[Cupriavidus taiwanensis LMG 19424]
Length = 330
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-------------VKPD 208
+NL V A +GV+Q LF+ S+ IY P E + +
Sbjct: 87 QNLAIATNVIHAAWQAGVRQLLFLGSSCIYPRLAPQPICEASLLTGALEPTNAPYAIAKI 146
Query: 209 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFD-RIVRKRPVPI 258
AG + + Y + +++ P + G G+N + F D R+ VP+
Sbjct: 147 AGIMLCDSYNRQYGTDYRCVMPTNLYGPGDNYHPDNSHVIPGLVRRFHDARLAGSARVPV 206
Query: 259 PGSGMQFTNIAHVRDL--SSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAKLCAQA 313
G+G H DL + + +A+ P EAA + N+ SD V++ +A L AQ
Sbjct: 207 WGTGKPLREFLHADDLARACLHVMALSTPAYREAAPAGFLNVGSDDEVSIGALAALVAQV 266
Query: 314 AG 315
G
Sbjct: 267 TG 268
>gi|29346140|ref|NP_809643.1| mRNA-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383122401|ref|ZP_09943094.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
gi|29338034|gb|AAO75837.1| putative mRNA-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842508|gb|EES70588.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
Length = 338
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTTGFPI-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|37521775|ref|NP_925152.1| epimerase/dehydratase [Gloeobacter violaceus PCC 7421]
gi|35212773|dbj|BAC90147.1| gll2206 [Gloeobacter violaceus PCC 7421]
Length = 362
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 37/244 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDEN----SDKMKKPPFNRFNEIVSAGGKTVWG 139
+G IG L LL GHEVT + G + +++ P + +I + + G
Sbjct: 6 TGTEGYIGTLLGGVLLERGHEVTGLDTGFHKVGWLYNGVRQAPLHLRQDIRHITEEDLRG 65
Query: 140 ------------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
DP VG + +T+D+ N +A AK +GV +F+++SS
Sbjct: 66 YDAIVHLAELSNDP--VGQLNPTITYDI-------NHIGTIELAKKAKRAGVSRFVYMSS 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEW 245
+Y E E V P + + + ++ + + A +F P ++ +
Sbjct: 117 CSVYGAGGEKFSTEESEVNPLTAYARCKIFVERDLAPMADENFSPTFLRNATAYGPSPRM 176
Query: 246 FFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFNLV 296
FD +V + + + G + HV D+ + A+E P N IFN V
Sbjct: 177 RFDLVVNSLAGFAWTAKEIRMESDGTPWRPFVHVLDMCQAIYCALEAPRQMVHNEIFN-V 235
Query: 297 SDRA 300
D A
Sbjct: 236 GDNA 239
>gi|398852107|ref|ZP_10608776.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM80]
gi|398244983|gb|EJN30515.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM80]
Length = 309
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 35/232 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRANLPLDNPKVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGASIDEDTPKAPLTPYASDKLAGEHYFDF--YRRQHGLEPAIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
F +R + P+ + G G Q + +V DL +L A+E PE
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFLYVEDLVDVLVQAIEKPE 234
>gi|313892069|ref|ZP_07825667.1| NAD dependent epimerase/dehydratase family protein [Dialister
microaerophilus UPII 345-E]
gi|313119521|gb|EFR42715.1| NAD dependent epimerase/dehydratase family protein [Dialister
microaerophilus UPII 345-E]
Length = 306
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 109/292 (37%), Gaps = 50/292 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVW 138
+GG IG +LA L+ H VTI+ D + +FN E + A +T
Sbjct: 6 TGGAGFIGSHLADALIKLNHNVTII-------DNLSSGT--KFNVPSEAEFIEADIRT-- 54
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
+ + N+ FD+V + N+ + V + + +GVK+
Sbjct: 55 ---SSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLESCRQTGVKKI 111
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASFRPQYMI 234
+F SSA +Y P E + + P + + EKY++ F ++ R +
Sbjct: 112 IFSSSAAVYGNNSNLPLSENESLSPTSFYGLTKTTSEKYLNLYFEYFGIHYTILRYSNVY 171
Query: 235 GSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G + E F + +P+ I G G Q + V D+ A+ N +
Sbjct: 172 GPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAITN---GNE 228
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMV 342
I N+ ++ TL+ +A + ++HY G + +N V
Sbjct: 229 KILNISTETETTLNELANKMINLSKKDKNLIHYKKPRNGDIYRSCLSNKNAV 280
>gi|406984870|gb|EKE05778.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 352
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 65/278 (23%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-------ENSDKMKKPPF-- 123
E K +LI +GG +G L+ LLG G+ V+ V D EN +K P F
Sbjct: 4 EIKNILI----TGGAGYLGSTLSAYLLGLGYNVS---VADSHWFNKIENGFCIKNPKFKE 56
Query: 124 --------NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNN---GKNLDAVRPVAD 172
N+ +++ + + VVG LD N G N VA+
Sbjct: 57 YYIDLRDTNKLCQLLKNCDAVI-----HLSGVVGDSA--CALDENFTFGCNYLNTFTVAN 109
Query: 173 WAKSSGVKQFLFISSAGIY------------KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
AKS GVK FLF SS +Y P + + D +K + + ++ +E
Sbjct: 110 LAKSYGVKIFLFASSCSVYGSMAGSSALTENSPTNPLSYYANDKLKSEECVLSLK---NE 166
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVR 272
+FS FR + G + FD +V P+ I G G Q+ HV+
Sbjct: 167 SFSP-VVFRLSTLFGWS-----DRMRFDLVVNGLTARAAINEPIKIFG-GTQWRPFLHVK 219
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDR-AVTLDGMAKL 309
D S L + + + + IFN+ SD+ T++ +++L
Sbjct: 220 DASIAFELGLHSNKKIAGQIFNVGSDKNNFTINQISEL 257
>gi|428206243|ref|YP_007090596.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008164|gb|AFY86727.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 325
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 227
++GVK+F+F+SS G + + P E +PD + +Q E+ I S++ W
Sbjct: 105 AAGVKRFVFVSSIGAMTSSSDRPLTESSPCQPDTPYGRSKLQAEQAIVQLASQSAMTWTI 164
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVEN 284
RP + G+GN + E R+++ + +P+P G+ ++ +V +L + + +
Sbjct: 165 LRPPLVYGAGNPGNME-----RLIKLVQTGLPLPFGAVKNRRSLIYVGNLVDAIASTLNH 219
Query: 285 PEAASSNIFNLVSD 298
P+AA+ LVSD
Sbjct: 220 PQAANQTF--LVSD 231
>gi|417916562|ref|ZP_12560139.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
gi|342829453|gb|EGU63807.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
Length = 326
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 56/253 (22%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYHDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVS 297
P+ AS ++N+ +
Sbjct: 217 PQ-ASGEVYNITN 228
>gi|206974687|ref|ZP_03235603.1| conserved domain protein [Bacillus cereus H3081.97]
gi|222096518|ref|YP_002530575.1| isoflavone reductase [Bacillus cereus Q1]
gi|423372904|ref|ZP_17350244.1| hypothetical protein IC5_01960 [Bacillus cereus AND1407]
gi|206747330|gb|EDZ58721.1| conserved domain protein [Bacillus cereus H3081.97]
gi|221240576|gb|ACM13286.1| possible isoflavone reductase [Bacillus cereus Q1]
gi|401098201|gb|EJQ06217.1| hypothetical protein IC5_01960 [Bacillus cereus AND1407]
Length = 340
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENGEVSPYEYYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENK 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
A IFN+ + +T++ + C + E V D
Sbjct: 215 NAG---IFNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|383314399|ref|YP_005375254.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis P54B96]
gi|384509001|ref|YP_005685669.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19]
gi|308276588|gb|ADO26487.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19]
gi|380869900|gb|AFF22374.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis P54B96]
Length = 327
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLMEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + K C G P+
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPI 269
>gi|336179997|ref|YP_004585372.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
gi|334860977|gb|AEH11451.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
Length = 331
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ L +GH+V + + +D +R ++++ T E
Sbjct: 6 TGGSGFIGAHVVDRLADAGHDVIALDLRTHRADPRAD---HRVLDVLNLPAVTSAFAGCE 62
Query: 144 VGNVVGGVT-----FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA---- 194
V + G++ F + N++ V + A+ +GV++ LF S+ +Y A
Sbjct: 63 VVFHLAGMSNVDHAFADPIRTVRLNVEGTANVCEAARVAGVRRVLFASTVWVYGAAGGDP 122
Query: 195 DEPPHVEGDV--VKPDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNNKD 241
D+P + DV AGHV I+ S++ Y + G G
Sbjct: 123 DDPHPLTEDVEFALVRAGHVYTSTKIAAELL-LHSYQQTYGVDFTILRYGIPYGPGMR-- 179
Query: 242 CEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+E R +RK P+ I G G QF N VRDL+ LA+ + +A + L
Sbjct: 180 -DELVLARFLRKALDGEPLTIAGDGQQFRNYVFVRDLADAHVLALAD--SARNATIALEG 236
Query: 298 DRAVTLDGMAK 308
D V++ MA+
Sbjct: 237 DERVSVLAMAQ 247
>gi|219848818|ref|YP_002463251.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
gi|219543077|gb|ACL24815.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
Length = 346
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 101/270 (37%), Gaps = 36/270 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVSAG 133
+VLI +GG +G LA+ LL G+ V + + PF+ N+I
Sbjct: 4 RVLI----TGGAGFLGINLARYLLARGYIVRSLDIA----------PFDYPERNQIEEHT 49
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQFL 183
G D A V + GV F V D ++D R V + A+ GV++ +
Sbjct: 50 GDI--RDRAAVDRAMQGVRFVVHTAAALPLYSPADIFSTDIDGTRNVLESARDHGVERVV 107
Query: 184 FISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISENFSNWAS---FRPQYMIGS 236
ISS +Y D P VE D V V+ E+ E RP+ +G
Sbjct: 108 HISSTAVYGIPDHHPLVETDPLSGVGPYGEAKVKAEELCLEFRKAGMCVPILRPKSFVGP 167
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+D + P+PG+G + V DL + L + ++ FN+
Sbjct: 168 -ERLGIFAMLYDWAMEGHNFPLPGNGKNRYQLLDVEDLCEAIVLCLTLDRDRVNDTFNIG 226
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+ T+ + AAG I+ + K
Sbjct: 227 AKEFTTIKEDFQAVLDAAGYGKRIITFPAK 256
>gi|400597748|gb|EJP65472.1| NAD-dependent epimerase/dehydratase [Beauveria bassiana ARSEF 2860]
Length = 332
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG IG +A++ L GH+VT+ FNR ++ G + + GD
Sbjct: 7 GGTHYIGRLVAEQSLARGHQVTV---------------FNRGSKPAPTGAQALVGDRLAP 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEP-PHV 200
+ + G+ FD V+D + AV R VA A + + F+SS +Y A P P+
Sbjct: 52 DGYAALSGLFFDAVIDTWAGDASAVKRAVA--ALRDRTRHYAFVSSISVYDHAASPGPYD 109
Query: 201 EG----DVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNKDCE-EWFFDRI 250
E D+ K + + +K SE + + RP ++G G W+ R+
Sbjct: 110 ETSALRDIDKTPVAYFR-DKLGSEREAAASGVPTLIVRPGLIVGPGETTPGRLPWWLRRM 168
Query: 251 VRKRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGM 306
R PG +QF + RDL++ L V+ E F+ VS +T++G+
Sbjct: 169 ERGDATMAPGPRDLALQFID---GRDLAAFL---VDGAERRLEGAFDAVSGIGHITMEGL 222
Query: 307 AKLCAQAAG 315
+ +AAG
Sbjct: 223 LEAANEAAG 231
>gi|421489319|ref|ZP_15936701.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
gi|400365951|gb|EJP18993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
Length = 326
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG +D N+ + V + +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACQE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ EG+ + + ++ YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKEGEAPQEN----KLNNYIRSKLASEKLFEDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|325569769|ref|ZP_08145793.1| hypothetical protein HMPREF9087_2082 [Enterococcus casseliflavus
ATCC 12755]
gi|325157074|gb|EGC69240.1| hypothetical protein HMPREF9087_2082 [Enterococcus casseliflavus
ATCC 12755]
Length = 298
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 38/210 (18%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPF 123
+K S KKVL++ GG G YL + L+ G +VTI T G D D++ + F
Sbjct: 1 MKRSVLMSKKVLVL----GGTRFFGKYLVQSLVDQGCDVTIATRGKTTDSFGDQVNRLVF 56
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+R D + + T+DV+ DN + + + + K+++
Sbjct: 57 DR-------------TDEESIKTTLTQETYDVIYDNIAYTSNDIEIL---LRHVTPKRYI 100
Query: 184 FISSAGIY-------KPADEPPHVEG------DVVKPDAGHVQVEKYISENFSNWAS--F 228
SS Y K D P E + V G VE+ +++N+S S
Sbjct: 101 VTSSMSAYHELHFDLKETDFDPAKEAVKIVYSEEVNYAEGKRTVEEILTQNYSQIPSVFV 160
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
R Y+IG+ + ++ D +++++P+ +
Sbjct: 161 RFPYVIGADDYTKRFAFYIDHLIKQKPMAV 190
>gi|163851458|ref|YP_001639501.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
gi|163663063|gb|ABY30430.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
Length = 307
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ + E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADAPEPTDPYGRSKLAAEEALGETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|423551225|ref|ZP_17527552.1| hypothetical protein IGW_01856 [Bacillus cereus ISP3191]
gi|401188558|gb|EJQ95626.1| hypothetical protein IGW_01856 [Bacillus cereus ISP3191]
Length = 340
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS IYK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSIYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ +R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIERVAKGGKVLVPGRKTRPVQIVDIKDVANWGLNMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|254822170|ref|ZP_05227171.1| hypothetical protein MintA_19704 [Mycobacterium intracellulare ATCC
13950]
gi|379747150|ref|YP_005337971.1| hypothetical protein OCU_24310 [Mycobacterium intracellulare ATCC
13950]
gi|378799514|gb|AFC43650.1| hypothetical protein OCU_24310 [Mycobacterium intracellulare ATCC
13950]
Length = 860
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYI 218
N+D R V D +G ++ +F S+A +Y P E D + P + QVE+ +
Sbjct: 75 NIDGARNVLDAMVETGSRRIVFASTAHVYGGGGGAPKAEHDALTPVTVDGQLNAQVERMV 134
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+E + W + R ++G + + W R + PV S + H+ D +
Sbjct: 135 AEAGTEWVAIRSALILG----RSVDNWV--RRMLALPVFPARSSDHRMQVVHLDDALRLF 188
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
A+ + E S + NL + VT + A A G PV + ++P
Sbjct: 189 NQAIVDGEIDSGPV-NLAAAGQVTF----RQIAAALGRPVVRLGFEP 230
>gi|431928657|ref|YP_007241691.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
gi|431826944|gb|AGA88061.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
Length = 307
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL + + + +GVK+ LF SSA +Y E ++ D K +K SE++
Sbjct: 94 NLVGTLNLCEAMREAGVKRVLFASSAAVYGNNGEGQAIDEDTPKAPLTPYAADKLASEHY 153
Query: 223 SNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT 266
++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 154 LDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTR 211
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+ +V DL +L A+E+PEAA + N+ ++A +L+ + + G E+ + +
Sbjct: 212 DFVYVGDLVEVLVQALESPEAAEGAV-NVGLNQATSLNQLLEAIGDVLGGLPEVSYQASR 270
Query: 327 AAGIDAKKA 335
+ I +A
Sbjct: 271 SGDIRHSRA 279
>gi|52142471|ref|YP_084357.1| isoflavone reductase [Bacillus cereus E33L]
gi|51975940|gb|AAU17490.1| possible isoflavone reductase [Bacillus cereus E33L]
Length = 341
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 49/290 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ VEN +A I
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKNRPVQIVDIKDVANWGLNMVENNKAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
FN + +T++ + C + E V + + ++ K P+ M
Sbjct: 219 FNATGPNYELTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEM 266
>gi|357390354|ref|YP_004905194.1| hypothetical protein KSE_34310 [Kitasatospora setae KM-6054]
gi|311896830|dbj|BAJ29238.1| hypothetical protein KSE_34310 [Kitasatospora setae KM-6054]
Length = 333
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 102/262 (38%), Gaps = 40/262 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +G A E L GH VT G +D PP G + V GD P
Sbjct: 7 GGSKFLGRAYATEALARGHRVTTFNRGVSRTD----PP----------GVEAVHGDRGNP 52
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH-V 200
A++ +V G T+D V+D +G+ V A + F+SS I+ AD P H V
Sbjct: 53 ADLERLVDGRTWDAVVDTSGQQPHDVATTARLLDGR-AGHYGFVSS--IHAFADWPAHPV 109
Query: 201 EGDV--------VKPD-----AGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWF 246
+ D + PD A E+ ++ +F+ A+ +IG W+
Sbjct: 110 DADSATLDCPGDLPPDQPFANALKAGCERALTAHFTGPAAILNCGLLIGPHEPIGRLPWW 169
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-LTLAVENPEAASSNIFNLVSDRAVTLDG 305
DRI R V PG + ++ RD ++ L LA A+ R+ T
Sbjct: 170 LDRIARGGRVLAPGHPDRPLSLIDARDFAAFGLDLAERR---AAGRYVTTAPIRSTTTGE 226
Query: 306 MAKLCAQAAGLPVEIVHYDPKA 327
C A G E+V + P A
Sbjct: 227 FLDACRTATGSDAELV-WTPDA 247
>gi|366089091|ref|ZP_09455564.1| hypothetical protein LaciK1_03173 [Lactobacillus acidipiscis KCTC
13900]
Length = 321
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 32/256 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEIVSAGGKTVWGDP 141
G + IG YL +L+ + +EV ++ G K P+ + + +I V DP
Sbjct: 7 GAYGHIGSYLVPKLVKNNNEVIAVSRG-------KHQPYTQDSGWKKIQHMSLDRV-KDP 58
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ + + DVV+D L+ + + K++ + +LF SS + A P
Sbjct: 59 -KFATKIAALNADVVVDLINFKLEDTQKMTAALKNTQLSHYLFCSSIWAHGRAKTLPADP 117
Query: 202 GDVVKPDAGHVQVEKYISENFSNWASFR----------PQYMIGSG-------NNKDCEE 244
D K K+ SE F +R P + G G N D
Sbjct: 118 NDPAKEPLDDYGKNKFASEQFLK-HEYRTNGFPVTIIMPGQISGPGWTIINPVGNTDLG- 175
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
F +I + +P GM+ + H D++ M A+ + A F+ V+ ++TL
Sbjct: 176 -VFQKIANGEKITLPNFGMETLHHVHADDVAQMFYKAILHRNQALGESFHAVAAESMTLY 234
Query: 305 GMAKLCAQAAGLPVEI 320
G AK C Q G +I
Sbjct: 235 GYAKACYQFFGQEPQI 250
>gi|148927806|ref|ZP_01811231.1| NAD-dependent epimerase/dehydratase [candidate division TM7
genomosp. GTL1]
gi|147886832|gb|EDK72377.1| NAD-dependent epimerase/dehydratase [candidate division TM7
genomosp. GTL1]
Length = 345
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 30/237 (12%)
Query: 68 KASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRF 126
K E+K VL GG ++G L LL G++ + ++ EN D ++K +
Sbjct: 31 KFMMKEEKIVL-----PGGAGLVGQNLVARLLQRGYKNIVVLDKHKENLDILRKVQPDIT 85
Query: 127 NEIVSAGGKTVWGDPAE-VGNVV------GGVTFDVVLDNNGKNLDAVRPVADWAKSSGV 179
E WG E G VV GG+ + DNN N+ + R + D + + V
Sbjct: 86 VEYADLAVPGDWGHHFEGAGTVVMLQAQIGGINYSE-FDNN--NVVSTRIILDLIRKNNV 142
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
+ ISS+ + AD+ + EK + ++ RP M G +
Sbjct: 143 PHLVHISSSVVESVADD---------FYTRSKKEQEKIVIDSGITCPILRPTLMFGWFDR 193
Query: 240 KDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
K + R ++K PV PIPG G +V D +++ +EN S I+N+
Sbjct: 194 KHLG--WLSRFMKKAPVFPIPGDGKYMRQPLYVGDFCNVIISCIEN--RVSKGIYNI 246
>gi|448458557|ref|ZP_21596223.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445809069|gb|EMA59116.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 298
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 103/262 (39%), Gaps = 42/262 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+ +GG IG YL + L GHEVT ++ ++ + + S G
Sbjct: 2 KVLV----AGGTGFIGSYLCRALADGGHEVTALSRSVSDTPEGVASATGDVTDYDSIAGA 57
Query: 136 TVWGDPAEVGNVV----------GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
D V N+V G V D + NL VR A+ G ++FL +
Sbjct: 58 AEGQD--AVVNLVALSPLFEPKGGNVMHDRIHRKGTDNL--VR----AAEDGGAERFLQL 109
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN-----NK 240
S+ G AD +GD A + E+ + E+ +W FRP + G G K
Sbjct: 110 SALG----AD----ADGDTAYIRA-KGEAEEIVRESGLDWTIFRPSVVFGEGGEFVSFTK 160
Query: 241 DCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
+ F + P+ P+PG G HV DL ML A+E E + +
Sbjct: 161 RLKGMFAPGV----PLYPLPGGGKTRFQPIHVEDLVPMLVAALEGDEHVGET-YEVGGPE 215
Query: 300 AVTLDGMAKLCAQAAGLPVEIV 321
+TL + L +A V IV
Sbjct: 216 VLTLREVTDLVYEAEEKGVTIV 237
>gi|338214070|ref|YP_004658127.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
gi|336307893|gb|AEI50995.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
Length = 317
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 112/291 (38%), Gaps = 63/291 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGDPA 142
+GG IG +LA+ LL G+ V + D D + P R N E++S + +
Sbjct: 6 TGGAGFIGSHLAERLLRQGNTVVCV---DNLDDYLYSPALKRANIELLSEYPAFTFIE-- 60
Query: 143 EVGNVVGGVTFDVVLDNNGK-------------------------NLDAVRPVADWAKSS 177
G++ +L + G N++ V + + +
Sbjct: 61 --GDIRNQEALRQLLLDRGCEAVFHLAAYAGVRASVQEPEKFMEVNINGTLSVLEAMREA 118
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV----VKPDAGHVQVEKYISENFSNWASF----- 228
G++ +F SS+ +Y A P E D + P A + + ++ ++ + F
Sbjct: 119 GLRTLIFASSSSVYGNAAHVPFKETDAADQPISPYAASKRAAELLAYSYYSLYGFQITCL 178
Query: 229 ----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
RP+ I F RI+ + P+ + G+G+ F N +V D L
Sbjct: 179 RLFTVYGPRQRPEMAIRK---------FIHRILEEEPIELYGNGLTFRNYTYVADAVQGL 229
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ ++N+ +++ L + ++ Q +I+ Y P+ AG
Sbjct: 230 MKALEHS-GEGFRVYNIGGAKSICLKEVIEVIEQITNKKSKII-YRPEQAG 278
>gi|76801846|ref|YP_326854.1| NADH dehydrogenase 32K chain-like protein [Natronomonas pharaonis
DSM 2160]
gi|76557711|emb|CAI49294.1| arNOG06768 family NADH-binding domain protein [Natronomonas
pharaonis DSM 2160]
Length = 305
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 92/255 (36%), Gaps = 45/255 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIM---------------TVGDENSDKMKKPPFNRFNEI 129
GG IG +L EL GHEVT M T GD + +P F + +
Sbjct: 7 GGTGFIGTHLCAELHDRGHEVTAMSRSPDDGGVPEGVEATAGDVTTYDSIEPAFEGVDAV 66
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
V+ + P+ GG + +G V A+ GV + + +S+ G
Sbjct: 67 VNLVALSPLFRPS------GGDEMHYRIHRDG-----TENVVAAAEKHGVDRLVQLSALG 115
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P E ++ Q E + + W RP + G G F
Sbjct: 116 A-DPDGETAYIR--------AKGQGEDIVRSSSLEWVILRPSVVFGDGGE------FIPY 160
Query: 250 IVRKRP---VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
+ P P+PG G + DL+ M+ A E A I+ L A+TL +
Sbjct: 161 TKQLAPAYLTPLPGGGKTRFQPIWIGDLAPMIADAATEDEHA-GEIYELGGPEALTLASI 219
Query: 307 AKLCAQAAGLPVEIV 321
AKL A G PV ++
Sbjct: 220 AKLAHAADGRPVNVL 234
>gi|357392864|ref|YP_004907705.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae
KM-6054]
gi|311899341|dbj|BAJ31749.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae
KM-6054]
Length = 325
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-----KTVWG 139
GG +G L + L +GH VT+ FN +SA G +TV G
Sbjct: 3 GGTRFVGRALVEAALAAGHRVTL------------------FNRGLSAPGLFPGVETVLG 44
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D + + G ++D V+D G +AV R VA A S V +++F+SS +
Sbjct: 45 DRTADLSALAGRSWDAVVDVAGYEPEAVRRSVA--ALSGRVGRYVFVSSLSVLADQATVQ 102
Query: 199 HVEGDVVKPD----------AGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWFF 247
+G+++ D A + E+ + + F AS RP ++G ++ D ++
Sbjct: 103 DEDGELLDLDRELPPHQLYGARKARCERIVLDAFGERASVVRPGLIVGPHDSTDRFPYWP 162
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
R R V +PG VRDL++ +
Sbjct: 163 RRFRRGGRVLLPGDPADPAQFIDVRDLAAWI 193
>gi|161527676|ref|YP_001581502.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
gi|160338977|gb|ABX12064.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
Length = 308
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWA------ 226
+ VK F+ SSA +Y + P E + P A + +E Y+ + +
Sbjct: 108 NNVKNFIAASSAAVYGNPKQIPVTEFTIPNPVSPYGADKIALEFYLRAFCNAYGINGIAL 167
Query: 227 SFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
F Y +G N F ++I + +P+ I G G + H+ DL + ++ N
Sbjct: 168 RFFNVYGLGQSNAYAGVITKFLNQIHQTKPLRIFGDGKNTRDFIHIDDLVMGIEQSISNI 227
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+++NL S ++V++ +AKL + + +EI + P+ +
Sbjct: 228 SGKRGSVYNLASGKSVSVKELAKLMLEISDKKLEIKYESPRKGDL 272
>gi|385807699|ref|YP_005844096.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 267]
gi|383805092|gb|AFH52171.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 267]
Length = 327
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLMEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + K C G P+
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPI 269
>gi|229088322|ref|ZP_04220172.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
gi|228694998|gb|EEL48124.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
Length = 326
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ SG+K+ + +S+ IY DE V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKSGIKRLIHVSTPSIYFYYDERQDVVENAKLPDTFVNHYAKTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
++ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QATDQAFNHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTEDVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ + + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNGERINL 234
>gi|449131947|ref|ZP_21768121.1| udp-glucose 4-epimerase [Rhodopirellula europaea 6C]
gi|448888756|gb|EMB19058.1| udp-glucose 4-epimerase [Rhodopirellula europaea 6C]
Length = 334
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
+++D +R V +K++GV + + SS+ +Y +P + P H + + + ++
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 221 NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHV 271
F ++ F Q+ + N + D +V K +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEG 289
>gi|423458902|ref|ZP_17435699.1| hypothetical protein IEI_02042 [Bacillus cereus BAG5X2-1]
gi|401145530|gb|EJQ53054.1| hypothetical protein IEI_02042 [Bacillus cereus BAG5X2-1]
Length = 341
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 51/275 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E+L GHEVT+ G K F ++
Sbjct: 2 KILIL----GGTRFLGRAFVEEVLNRGHEVTVFNRG------TNKEIFPEVEHLI----- 46
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD GNV+ +DVV+D G + +R V + K+ +K ++FISS +YK
Sbjct: 47 ---GDRN--GNVLSLENRKWDVVIDTCGFSPHHIRNVGEVLKNH-IKHYIFISSLSVYK- 99
Query: 194 ADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------R 229
D PH E +++P+ Q++ + S + + R
Sbjct: 100 -DWIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPGRVLHVR 158
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ G + D ++ R+ + V +PG + + ++D++ EN +A +
Sbjct: 159 AGLLSGMFDYTDRLTYWIQRVAKGGKVLVPGRKDRPVQMVDIKDVACFGLNMAENNKAGT 218
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
NI + +T++ + C + E V D
Sbjct: 219 FNITG--PNDKLTMEELLNTCKKVTNSDAEFVWVD 251
>gi|332708433|ref|ZP_08428410.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352836|gb|EGJ32399.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 327
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---------AGHVQVEKYISENFSN 224
A +GV+ F+FISS G + E +PD A +E S N
Sbjct: 104 AIKAGVQHFIFISSIGAMATLSDQILTENSPCQPDTPYGCSKLKAEQALIELASSSNKMT 163
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
W RP + G GN + E + +K P+P GS ++ V +L + + +
Sbjct: 164 WTILRPTLVYGQGNPGNMER-LIKLVQKKLPLPF-GSLNNRRSLVFVGNLVDAIATIITH 221
Query: 285 PEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIV 321
P+A + L+SD ++ + + AQ LP I+
Sbjct: 222 PQAKNQTF--LISDGEDLSTTQLIRQIAQCLELPCHIL 257
>gi|296270279|ref|YP_003652911.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM
43833]
gi|296093066|gb|ADG89018.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM
43833]
Length = 337
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 102/272 (37%), Gaps = 50/272 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG +G + E L GH VT FNR V G
Sbjct: 2 RLLII----GGGIFLGRAIVAEALARGHRVTT---------------FNRGRTGVDLPGT 42
Query: 136 TV-WGD---PAEVGNVVGGVTFDVVLDNNGKN----LDAVRPVADWAKSSGVKQFLFISS 187
T+ GD PA++ + +D V+D G L++VR + S + FISS
Sbjct: 43 TIIRGDREVPADLDRLAAAGPWDAVIDVCGYTPRIVLESVRRL-----SGRAGHYTFISS 97
Query: 188 AGIYKPADEPPHVEGDVVK----PDAGH---------VQVEKYISENFSNWASF--RPQY 232
Y+ P ++ + PDAG E+ + E+F A+ RP
Sbjct: 98 VSAYRDWPMTPGIDESSPRFDCPPDAGEEYGEYGVLKAGCERAVEEHFRG-ATLVIRPGL 156
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
++G +N W+ RI R V PG + + RD+++ VE A
Sbjct: 157 IVGPNDNIGRLPWWLTRIARGGRVLAPGDPDRPLQLIDARDIAAFTVDQVERGTAGRFLT 216
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ + T G+ C + G E V D
Sbjct: 217 GGVPGN--TTFGGLLADCLEITGSGAEPVWVD 246
>gi|358635412|dbj|BAL22709.1| hypothetical protein AZKH_0363 [Azoarcus sp. KH32C]
Length = 305
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 181 QFLFISSAG-IYKPADEPPHVEGDVVKPD----AGHVQVEKYISE---NFSNWAS-FRPQ 231
+ L++SS G +Y A P E +++P AG E +IS FS+ A+ RP
Sbjct: 107 ELLYLSSGGTLYGDAGADPATEHHIIRPKSYYGAGKAAAEHFISAWTAQFSSRATILRPS 166
Query: 232 YMIGSGNNKDCEEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ G G + + F D ++ P+PI G G + ++ D + + P
Sbjct: 167 NLYGPG--QTIRQGFGIVPTALDAAMKGTPLPIWGDGSTVRDYLYIVDFIRLCLDILAAP 224
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
A + I N S V+L+ + G P+ HY P
Sbjct: 225 MPAGTQIMNAASGHGVSLNELLAHIETVTGKPM-TRHYQP 263
>gi|417305380|ref|ZP_12092350.1| udp-glucose 4-epimerase [Rhodopirellula baltica WH47]
gi|327538334|gb|EGF25008.1| udp-glucose 4-epimerase [Rhodopirellula baltica WH47]
Length = 334
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
+++D +R V +K++GV + + SS+ +Y +P + P H + + + ++
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 221 NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHV 271
F ++ F Q+ + N + D +V K +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEG 289
>gi|448316711|ref|ZP_21506292.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445607126|gb|ELY61020.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 374
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYIS 219
+D R V A+ GV++ +ISS +Y D P E + V P +Q E +
Sbjct: 112 IDGTRNVLWAARDRGVERVCYISSTAVYGTHDAHPITEESPLEGVGPYGEAKIQAEN-VC 170
Query: 220 ENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+F RP+ +G + FD I VP+ G G + HVRDL
Sbjct: 171 RDFRRMGMCVPILRPKTFVGP-KRLGVFQVLFDWIADGANVPLVGRGDNRYQLLHVRDLV 229
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ + L + EAA ++ FN+ +D T+
Sbjct: 230 AAVELMLTGDEAAVNDTFNVGTDEFGTM 257
>gi|320333142|ref|YP_004169853.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM
21211]
gi|319754431|gb|ADV66188.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM
21211]
Length = 323
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 94/250 (37%), Gaps = 39/250 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVSAGGKTVWGDP 141
GG +G ++ LL GH VT T G D+ +++++ +R N +SA W
Sbjct: 7 GGTQFVGRHIVLTLLARGHHVTTFTRGRTPDDLPEQVERLHGDR-NADLSALADGSW--- 62
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
D +D + VR V D A V ++ FIS+ +Y P E
Sbjct: 63 ------------DACVDVSAYTPQQVRAVGD-ALQGRVGRYAFISTISVYADFSRGPITE 109
Query: 202 GDVVK----PDAGHVQVEKY----------ISENFSNWAS-FRPQYMIGSGNNKDCEEWF 246
+ PD V E Y F + A+ RP + G ++ + +
Sbjct: 110 DARLHEPPAPDVQTVTGETYGPLKVACEHEALRAFGDRATILRPDIVAGPFDHTERYTTW 169
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ P+ PG G + RDL+ L +E + +FN+V +T
Sbjct: 170 VRRVATGGPMLAPGDGRADVQVIDARDLAEFTALTLEQ---DTPGVFNVVGPH-LTWSAF 225
Query: 307 AKLCAQAAGL 316
AQA G+
Sbjct: 226 LDTLAQATGV 235
>gi|303248850|ref|ZP_07335099.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
gi|302489719|gb|EFL49652.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
Length = 319
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 35/263 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G +A+EL G G T++T D + F + V V+ A+
Sbjct: 16 AGHRGLVGAAIARELTGLG--ATLVTRTHRELDLTNQAAVRAFFDSVRPAA--VFLAAAK 71
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADE 196
VG + T+ D + DN L V D AK++GVK+ +F+ S+ IY +P E
Sbjct: 72 VGGIHANDTYPADFIRDN----LLIATHVIDAAKNAGVKKLVFLGSSCIYPKLAPQPMRE 127
Query: 197 PPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKD------- 241
+ G + + AG + Y + + S P + G G+N
Sbjct: 128 DCLLTGPLESTNQWYAIAKIAGIKMCQAYRRQYGFSAISLMPTNLYGPGDNFTPVNSHVI 187
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+ R+ + V + G+G HV D++ + A I N+ S
Sbjct: 188 PGLMRRFHEARLAGSKQVAVWGTGNALREFLHVDDMARAAVACYLRYDDA--EIVNIGSG 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
+ VT+ +A L A+ G EIV
Sbjct: 246 QEVTIRELATLMAKITGYQGEIV 268
>gi|419782083|ref|ZP_14307894.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
gi|383183724|gb|EIC76259.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
Length = 326
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 56/253 (22%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQHGYQVRAFGRNRKVGQSFENSLVTFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG +D N+ + V + +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G+Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGLQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVS 297
P+ AS ++N+ +
Sbjct: 217 PQ-ASGEVYNITN 228
>gi|223938792|ref|ZP_03630680.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223892490|gb|EEF58963.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 321
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 43/267 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG--KTVWGDP 141
+GG IG ++ + LL SGH ++ + D N + E+ + G K V G+
Sbjct: 6 TGGAGFIGSHVCERLLQSGH--SVWALDDLNPFYSPAVKESNLREVAALGKPFKFVLGEL 63
Query: 142 AE---VGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++ VGNV V FD V+ + N++ + + A+ GVK+
Sbjct: 64 SDARIVGNVFKEVQFDQVIHLAARAGVRPSLDEPEFFQQVNVEGTVNILEAARRHGVKKV 123
Query: 183 LFISSAGIYKPADEPPHVEGD----VVKPDA---------GHVQVEKYISENFSNWASFR 229
L SS+ +Y + P E D V+ P A GHV Y + + R
Sbjct: 124 LIASSSSVYGVNRKIPFAESDPVFSVISPYAASKLACEALGHVYHHVY----GMDVSMLR 179
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G D F +++ +P+P+ G G + ++ D+ + E
Sbjct: 180 FFTVYGPRQRPDLAIHKFAKLITTGKPIPVYGDGSTARDYTYISDIVDGVVACTER--KF 237
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ IFNL V L + ++ Q+ G
Sbjct: 238 TYEIFNLGGSETVNLSRLIEVLEQSLG 264
>gi|423458753|ref|ZP_17435550.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
gi|401145916|gb|EJQ53437.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
Length = 328
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ GVK+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGSQKYGVKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|320168804|gb|EFW45703.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 297
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP ++ G G E WF V IP + Q++ I H DL+ VENP+
Sbjct: 155 LRPGFVFGKGA-AHFERWFAQFHKNVPEVVIPAAERQYSYI-HADDLAEAYQRVVENPKI 212
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
AS +++ + D +T A++ A+AAG ++V D
Sbjct: 213 ASGSVYTIGDDSRITHIEFARVFAKAAGYQGKLVASD 249
>gi|440740605|ref|ZP_20920085.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens
BRIP34879]
gi|447919641|ref|YP_007400209.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas poae RE*1-1-14]
gi|440376143|gb|ELQ12825.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens
BRIP34879]
gi|445203504|gb|AGE28713.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas poae RE*1-1-14]
Length = 309
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V ++ + G ++ + P V+ A
Sbjct: 9 TGGAGFIGSHLVDALLAKGYAVRVLDNLSTGKRSNLPLDNPRLQLLEGDVADAEQVAQAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V D + + N V + + +GVK+ +F SSA +Y
Sbjct: 69 VGVSAVVHLAAVASVQASV--DDPVGTHQSNFVGTLNVCEAMRKAGVKRVVFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ + K +K E++ ++ +R Q+ + G +D
Sbjct: 127 NNGEGASIDEETTKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFNVFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R P+ + G G Q + +V DL +L A+E P+A I N+
Sbjct: 185 SPYSGVISIFSERAQTGAPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAPQAPLGAI-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+R TL + + Q G LP V Y P +G
Sbjct: 244 WNRTTTLKQVLQALEQVVGTLPT--VTYGPARSG 275
>gi|421613234|ref|ZP_16054322.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SH28]
gi|408496001|gb|EKK00572.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SH28]
Length = 334
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD--------VVKPDAGHV 212
+++D +R V +K++GV + + SS+ +Y +P + P H + + + G
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
Y E + FR G D F + +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTSDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEG 289
>gi|423559305|ref|ZP_17535607.1| hypothetical protein II3_04509 [Bacillus cereus MC67]
gi|401188772|gb|EJQ95833.1| hypothetical protein II3_04509 [Bacillus cereus MC67]
Length = 341
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLKNRKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTSDQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGHVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S EN +A + NI
Sbjct: 162 LSGVFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|456985078|gb|EMG20990.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 168
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKP 207
Y DEP E ++P
Sbjct: 125 YGIKDEPNVTEDFSLEP 141
>gi|423436549|ref|ZP_17413530.1| hypothetical protein IE9_02730 [Bacillus cereus BAG4X12-1]
gi|401122285|gb|EJQ30072.1| hypothetical protein IE9_02730 [Bacillus cereus BAG4X12-1]
Length = 341
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKTVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|392422595|ref|YP_006459199.1| epimerase [Pseudomonas stutzeri CCUG 29243]
gi|390984783|gb|AFM34776.1| epimerase [Pseudomonas stutzeri CCUG 29243]
Length = 309
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL + + + SGVK+ LF SSA +Y E ++ D K +K SE++
Sbjct: 96 NLIGTLNLCEAMRESGVKRVLFASSAAVYGNNGEGHAIDEDTPKAPLTPYAADKLASEHY 155
Query: 223 SNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT 266
++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 156 LDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTR 213
Query: 267 NIAHVRDLSSMLTLAVENPEAA----------SSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+ +V DL +L A+E+PEA ++++ L++ L G+ K+ QAA
Sbjct: 214 DFLYVADLVEVLVQALESPEAVEGAVNVGLNQATSLNQLLAAIGDVLGGLPKVSYQAA-R 272
Query: 317 PVEIVH 322
P +I H
Sbjct: 273 PGDIRH 278
>gi|218296664|ref|ZP_03497382.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
gi|218242977|gb|EED09510.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
Length = 317
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 30/273 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G++ ++ E ++ + F E + V+ A+
Sbjct: 10 AGHRGLVGSAILRRLQAEGYQNLVLRTRKELDLTDQRAVYRFFEE---ERPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP----- 197
VG ++ T+ D +NL V D A GVK+ LF+ S+ IY K A +P
Sbjct: 67 VGGILANATYPA--DFIRENLLIQTNVIDAAYRYGVKKLLFLGSSCIYPKYAPQPMKEEY 124
Query: 198 -------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
P E V AG V+ Y + N S P + G G+N D E
Sbjct: 125 LLTGPLEPTNEAYAVAKIAGIEMVQAYRRQYGFNGISLMPTNLYGPGDNFDLETSHVIPA 184
Query: 244 --EWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + V R V + G+G HV DL+ + + + I N+
Sbjct: 185 LLRKFHEAKVSGRWEVVVWGTGTPRREFLHVDDLADAALFLMRHYDG--EEIVNVGVGED 242
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A+L A+ G +IV+ K G K
Sbjct: 243 ISIRELAELIAKVVGFRGKIVYDTSKPDGTPRK 275
>gi|163847195|ref|YP_001635239.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222525035|ref|YP_002569506.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
gi|163668484|gb|ABY34850.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222448914|gb|ACM53180.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
Length = 337
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 110/282 (39%), Gaps = 47/282 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++L+ +GG IG L +L +GH V ++ D + + A
Sbjct: 4 KRILV----TGGAGFIGSELVTQLAAAGHRVVVV-------DNLVNGKRANLAHLADADV 52
Query: 135 KTVWGDPAE---VGNVVGGVTFDVVL-------------DNNGKNLDAVRPVADWAKSSG 178
+ V D + + +V GV L +N+ N + D A+ +
Sbjct: 53 ELVEVDIRQREVIARLVQGVEIVYHLACLGVRHSLHDPFENHDVNATGTLILLDLARRAD 112
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFR-PQYM 233
V +F+++SS+ +Y A P E P G + E Y + W S+R P +
Sbjct: 113 VPRFVYVSSSEVYGTARWVPMTEEHPTYPMTVYGGGKLAGECYTR---AFWESYRYPTVV 169
Query: 234 I-----------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
+ G++ + F R + P+ I G G Q + +V D + + LA
Sbjct: 170 VRPFNSFGPRSHHEGDSGEVIPKFMLRAMAGLPMVIFGDGTQTRDFTYVSDTARGIMLA- 228
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+AA FNL R ++++ +A+ A G P + YD
Sbjct: 229 GMVDAAIGGTFNLGQGREISINELARTVATVVGRPDAAIVYD 270
>gi|423218422|ref|ZP_17204918.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
gi|392627925|gb|EIY21960.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
Length = 339
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGVKQFLFISSAGIY-KPADE- 196
D V + ++DVV G D R + + + KQ++FISSA Y KP +
Sbjct: 50 DEQAVAKAIAHESYDVVAQFIGYTAKDVERDIRLFQHKT--KQYIFISSASAYQKPQTDY 107
Query: 197 ---------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG------SGNNKD 241
P E K +A V + Y + F RP + S +
Sbjct: 108 RITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TIVRPSHTYNGTKPPVSVHGAK 166
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
RI+ +PV IPG G + H +D + + NP A N F++ +D ++
Sbjct: 167 GNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAI-GNAFHITTDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G P+ +H
Sbjct: 226 TWNQIYETIADALGKPLNALH 246
>gi|424925157|ref|ZP_18348518.1| Nucleoside-diphosphate-sugar epimerase [Pseudomonas fluorescens
R124]
gi|404306317|gb|EJZ60279.1| Nucleoside-diphosphate-sugar epimerase [Pseudomonas fluorescens
R124]
Length = 309
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL +GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLATGHSVRILD--DLSTGKRANLPLDNPQVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A++ PE N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITLFGDGEQTRDFLYVEDLVDVLVQAIDKPE-VEVGAMN 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A+ L M + + G LP V Y P +G
Sbjct: 242 VGWNQAMNLKQMLQALQEVVGELPP--VSYGPARSG 275
>gi|337281987|ref|YP_004621458.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 15912]
gi|335369580|gb|AEH55530.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 15912]
Length = 325
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 39/250 (15%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + + F + +V AG T WG NVVG
Sbjct: 50 GDLSSIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-F 222
+ V + + VK+ +++SS IY + ++ E D P H+ K SE F
Sbjct: 93 QNVLELCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S+++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKLPAGLVAGVAYS 264
Query: 338 FRNMVFIFFY 347
V+ FF+
Sbjct: 265 LEG-VYRFFH 273
>gi|345006718|ref|YP_004809571.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344322344|gb|AEN07198.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 330
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 50/285 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL +EVTI G+ + PF G + + GD E
Sbjct: 9 GGTRFIGRHTVEDLLEHDYEVTIFNRGNHEN------PFAD-----REGVEQIEGDRRED 57
Query: 145 GNVVGGVTF---DVVLDNNG---KNLD-AVRPVADWAKSSGVKQFLFISSAGIY------ 191
++ D+V+D +++D AV AD V +++ISS Y
Sbjct: 58 QDLRAAALSARPDIVIDCVAYYPEDVDVAVDIFAD------VDGYVYISSGDAYGEEWIP 111
Query: 192 --------KPADEPPHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGN 238
+P E V D G+ + E + +E N S RP + G +
Sbjct: 112 KREGATPMRPCTEEQAV--DDSDETYGNRKAEGDRIVQRAAEEGVNAMSVRPCIVYGPYD 169
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+++ DR+ + +PG G + A+ D+ S L E E +N+
Sbjct: 170 YTGRMDYWLDRVDTHDRIVVPGDGQNLWHRAYAPDVGSALRTVAE--EGEPGKFYNVGDQ 227
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRN 340
RAVTL+ M L A A +E+V + AAG++ + +R
Sbjct: 228 RAVTLEEMLDLVADAMDTDLEVVTAGERELAAAGLEPEDFILYRE 272
>gi|254455290|ref|ZP_05068719.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082292|gb|EDZ59718.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211]
Length = 329
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 57/259 (22%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGDE---NSDKMKKPPFNR 125
E KK+ I +GG +G LA L+ G+E+TI M G++ ++ K+KK
Sbjct: 2 TEIKKIFI----TGGAGYVGAMLAPFLISKGYELTIYDLMIYGEDVIADNSKIKK----- 52
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVT-FDVVLD--------------NNGK--NLDAVR 168
V GD ++ NV + D V+ N GK NLDA
Sbjct: 53 -----------VTGDIRDIENVKKSMKGHDAVIHLACISNDPSFELNPNLGKSINLDAFE 101
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--DAGHVQVE------KYISE 220
P+ A+ VK+F++ SS+ +Y +E E ++P D + E +Y +E
Sbjct: 102 PMVKIARELNVKRFIYASSSSVYGIKNEINVHEDMALEPLTDYSKFKAECESILSRYNTE 161
Query: 221 NFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+F+ + RP + G + + + KR + + G G Q H++D+
Sbjct: 162 DFTT-VTIRPATVCGYSTRQRLDVVVNILTNLAYHKRKITVFG-GEQLRPNLHIKDMIES 219
Query: 278 LTLAVENPEAASSN-IFNL 295
L + + SN IFN+
Sbjct: 220 YYLVLNAKKNLISNQIFNV 238
>gi|153806516|ref|ZP_01959184.1| hypothetical protein BACCAC_00780 [Bacteroides caccae ATCC 43185]
gi|149131193|gb|EDM22399.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
caccae ATCC 43185]
Length = 339
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGVKQFLFISSAGIY-KPADE- 196
D V + ++DVV G D R + + + KQ++FISSA Y KP +
Sbjct: 50 DEQAVAKAIAHESYDVVAQFIGYTAKDVERDIRLFQHKT--KQYIFISSASAYQKPQTDY 107
Query: 197 ---------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG------SGNNKD 241
P E K +A V + Y + F RP + S +
Sbjct: 108 RITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TIVRPSHTYNGTKPPVSVHGAK 166
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
RI+ +PV IPG G + H +D + + NP A N F++ +D ++
Sbjct: 167 GNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAI-GNAFHITTDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G P+ +H
Sbjct: 226 TWNQIYETIADALGKPLNALH 246
>gi|406877374|gb|EKD26619.1| methyltransferase FkbM [uncultured bacterium]
Length = 292
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE--KYISENFSNWASFRPQ 231
A+ +G+K+ LF+S+ + +K ++ V++E + I ++ NW RP
Sbjct: 87 AEEAGIKRALFVSTTAV-----------KTTLKANSKKVRLEAEETIKKSSLNWTIIRPT 135
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G ++++ F + VRK P + IPGSG HV DL+ + A + E S
Sbjct: 136 MIYGGLDDRNIIR--FIKFVRKMPFLIIPGSGEFLQQPVHVEDLAKGIVDAFFS-ENTSY 192
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
+NL V+ + M ++ + + ++ H+
Sbjct: 193 KTYNLSGAFPVSFNQMIQIVSDGLKVKRKVFHF 225
>gi|388254822|gb|AFK24937.1| NAD-dependent epimerase/dehydratase [uncultured archaeon]
Length = 304
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 161 GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHV 212
G N+D + + A S +K F+F SSA +Y P E + P AG
Sbjct: 93 GVNVDGTLALLE-ACSGRIKNFIFASSAAVYGRQTRLPISENQPLAPLSVYGATKMAGEG 151
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTN 267
V Y + A+ ++ G N+ E F +R+ +P I G G+Q +
Sbjct: 152 LVSAYTNSRQIPQATI-LRFFNAYGQNQSLEYAGVIAKFAERLAEGKPPIIFGDGLQTRD 210
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
V D+ + LA++ + +S ++N+ + R V+++ +A + GL V +H D
Sbjct: 211 FVSVEDIVGAIILAMD---STTSGVYNIGTGRPVSVNDLAASMIRIMGLNVTPIHRD 264
>gi|228953370|ref|ZP_04115416.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|423425172|ref|ZP_17402203.1| hypothetical protein IE5_02861 [Bacillus cereus BAG3X2-2]
gi|423506235|ref|ZP_17482825.1| hypothetical protein IG1_03799 [Bacillus cereus HD73]
gi|449089584|ref|YP_007422025.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806267|gb|EEM52840.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401112387|gb|EJQ20265.1| hypothetical protein IE5_02861 [Bacillus cereus BAG3X2-2]
gi|402449166|gb|EJV81004.1| hypothetical protein IG1_03799 [Bacillus cereus HD73]
gi|449023341|gb|AGE78504.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 341
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|322373189|ref|ZP_08047725.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
gi|321278231|gb|EFX55300.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
Length = 326
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 62/277 (22%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-----------------TIMTVGDENSDK 117
KKVL+ +G +G Y+ +EL+ G++V GD + +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELVEHGYQVRAFGRNRAIGQSLVNASVTFIQGDLTNQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLTKACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+ +++ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 103 AKIERLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLFKDYPDVS 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA
Sbjct: 159 SVILRPRGLFGIGDTS-----ILPRVLNLSQKIGIPLIGDGRQLMDMTCVENVALAIRLA 213
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+E P+AA ++N+ + + + + G P+
Sbjct: 214 LETPQAA-GEVYNITNGEPRAFRNLIEETLRGLGYPI 249
>gi|119872996|ref|YP_931003.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
gi|119674404|gb|ABL88660.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
Length = 322
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F + +R P+ + G G+Q + A+V D+ + L + + + E + ++N+ SD VT+
Sbjct: 203 FLVQALRGEPITVHGDGLQTRSFAYVSDVVNGL-ITIAHCERCAGEVYNVGSDEEVTILE 261
Query: 306 MAKLCAQAAGLPVEIVH 322
+AKL + AG IVH
Sbjct: 262 LAKLVKEVAGSASPIVH 278
>gi|260063374|ref|YP_003196454.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
gi|88783468|gb|EAR14640.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
Length = 314
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 174 AKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAGHVQVEKYISE 220
A +GV +F+F+ S+ IY K A++P P EG + AG ++ +
Sbjct: 95 AHEAGVPKFVFLGSSCIYPKMAEQPIREDALLTGPLEPTNEGYALAKIAGVRLIQALRDQ 154
Query: 221 NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPGSGMQFTNIAH 270
++ S P + G +N D E ++RK PV + GSG H
Sbjct: 155 YNRDYVSLMPTNLYGPNDNFDLETSHVLPALIRKFHEAKQNDNAPVTLWGSGSPRREFLH 214
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
V DL+ + A+ENP +++N+ + +T+ +A+ + G EI
Sbjct: 215 VDDLARAVVHALENP--LPDHLYNVGTGSDITIKELARTVQRIVGHTGEI 262
>gi|320104141|ref|YP_004179732.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319751423|gb|ADV63183.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 364
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---------- 212
N+ A++ + D A VK+F+ +SS G+Y+ D H D P A H
Sbjct: 100 NVHALKFLLDAAVEEKVKRFVHVSSLGVYEGRD---HFGTDETVPPAIHALDGYTRSKIE 156
Query: 213 ---QVEKYISENFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKRPVPIP 259
V Y+ E RP ++ G + +D + W+
Sbjct: 157 AEDLVMSYVKEKGLAATVVRPGFIYGERDRTVIPKLLKALRDGKFWYL------------ 204
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
GSG Q N +V++L + A E PEA IFN+ + V+ A+ AG+
Sbjct: 205 GSGEQALNCVYVKNLVHAIERAAEVPEAV-GEIFNITDGQPVSKKRFVTKVAELAGI 260
>gi|423675041|ref|ZP_17649980.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
gi|401308976|gb|EJS14350.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
Length = 328
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|424914346|ref|ZP_18337710.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850522|gb|EJB03043.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 317
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 39/255 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ S +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRG-------AAKPYTENRAWASVDQR 50
Query: 136 TVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D AE+ G V V D+V+D L++ + A S V FL +
Sbjct: 51 RM--DRAEMERTGDFGPAVRDVKADIVIDMICFTLESAEQLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFR--------PQYMIGSG--- 237
+ P +E + K G ++K E + A R P +++G G
Sbjct: 108 THGYPSTVPTLE-EAPKSPFGDYGIQKAAIETYLLQQARLRGFPATVIHPGHIVGRGWAP 166
Query: 238 ----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
N + + F + R + +P G++ + H D+++M A+ N A++ F
Sbjct: 167 LNPAGNFNLQ--VFSTLARGDALALPNFGLETVHHVHADDVAAMFMDAIANWNASTGESF 224
Query: 294 NLVSDRAVTLDGMAK 308
+ VS++A+TL G A+
Sbjct: 225 HAVSEQALTLRGYAE 239
>gi|374626018|ref|ZP_09698432.1| hypothetical protein HMPREF0978_01752 [Coprobacillus sp.
8_2_54BFAA]
gi|373914544|gb|EHQ46359.1| hypothetical protein HMPREF0978_01752 [Coprobacillus sp.
8_2_54BFAA]
Length = 593
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 37/253 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VLI +G ++ IG + K L S E + T+ D K+ F++++ + G
Sbjct: 304 KRVLI----TGANSYIGESVEKWLNNSDDEYEVDTL-DMLDPNWKEYDFSKYDTVFHVAG 358
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
A+VGNV D V K N D VA+ AK + VKQF+F+SS +Y
Sbjct: 359 IA----HADVGNVS-----DEVKQRYYKVNTDLTLEVANKAKEAEVKQFIFMSSMIVYSG 409
Query: 194 ADEPPHVEGDVVKPDA----------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
E H+ D KP A +++++ SE+F RP + G G+ +
Sbjct: 410 C-ETTHITKD-TKPKAENFYGDSKLQADLKLQEINSESFK-VVVVRPPMIYGKGSKGNYP 466
Query: 244 EWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+ ++ K PV PI + ++ H+ +L + L ++N E S +F +D
Sbjct: 467 Q--LAKLATKLPVFPIVDNK---RSMLHIDNLCEFIKLMIDNEE---SGVFFPQNDEYTN 518
Query: 303 LDGMAKLCAQAAG 315
M ++ A G
Sbjct: 519 TSDMVQMIANVKG 531
>gi|363420374|ref|ZP_09308466.1| UDP-glucose 4-epimerase [Rhodococcus pyridinivorans AK37]
gi|359735616|gb|EHK84573.1| UDP-glucose 4-epimerase [Rhodococcus pyridinivorans AK37]
Length = 327
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 110/286 (38%), Gaps = 52/286 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G LL GH+V + V D ++ E V G + V GD A
Sbjct: 6 TGGAGYVGSVCTTVLLEQGHDVVV--VDDLSTGNA---------EAVPTGAEFVEGDIAA 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFLFIS 186
V + ++ G FD VL ++L ++V P W + SG + +F S
Sbjct: 55 VADELLSGSRFDGVLHFGAQSLVGESVEFPEKYWQGNVVTTLALLQAVRRSGTPRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFR----PQYMI 234
+A Y D P E +P + + I S++A S R
Sbjct: 115 TAATYGEPDSVPITEDAPTRPTNPYGASKLAIDHAISSYAHAHGLAATSLRYFNVAGAYG 174
Query: 235 GSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G+G N+ E +++ + + + G+ G + HV+DL+ LA+
Sbjct: 175 GAGENRVVETHLIPLVLQVALGVRDHISVFGTDWPTKDGTAVRDYIHVKDLADAHVLALT 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
E I+NL S T+ + C + GLP+ V P+ AG
Sbjct: 235 KSEPGRHGIYNLGSGEGFTVREVISACERVTGLPIAAVDA-PRRAG 279
>gi|309789950|ref|ZP_07684526.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides
DG-6]
gi|308227970|gb|EFO81622.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6]
Length = 320
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV----VKPDAGHVQVEKYISENFSNWAS 227
+ A+ GV+QF+ S++ +Y A++ P E D + P A + + ++ F + +
Sbjct: 112 ELARQYGVEQFVLASTSSVYGKAEKLPFEEDDRTDQPLSPYAATKKAAEVLAYTFHSLYA 171
Query: 228 F-----RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTL 280
R + G D + F D++VR P + G+ F + +V D+ + +
Sbjct: 172 MPMSVVRFFTVYGPRGRPDMTPYLFVDKMVRGEPFVLFNRGINLFRDYTYVDDIVAGVVA 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
A++ P A IFNL + + V + L Q G P +I
Sbjct: 232 ALDRP--AGYQIFNLGNSQPVEMCRFVGLLEQITGYPAQI 269
>gi|429331901|ref|ZP_19212641.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida CSV86]
gi|428763412|gb|EKX85587.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida CSV86]
Length = 309
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIV--SA 132
+GG IG +L LL GH V ++ + G ++ ++ P E+V +
Sbjct: 9 TGGAGFIGSHLCDALLQKGHSVRVLDDLSTGKRDNLQLGHPGLQLIEGDVADAELVKRAV 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + +GVK+ LF SSA +Y
Sbjct: 69 EGCRAVVHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRLAGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D+ K +K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDIAKAPLTPYASDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +++ A+E P + N+
Sbjct: 185 SPYSGVISIFCERALSGTPITVFGDGEQTRDFLYVSDLVAVMVQALEMPRVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|409729979|ref|ZP_11271590.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722284|ref|ZP_21704822.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789995|gb|EMA40668.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 294
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 46/256 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG YL EL+ GHEVT ++ + P + F+E +
Sbjct: 6 TGGGGFIGRYLCDELVERGHEVTALS---------RDPDPSIFDE--------------D 42
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV----------RPVADWAKSSGVKQFLFISSAGIYKP 193
VG VG VT ++ + D V +P D + GV ++ +
Sbjct: 43 VGTAVGDVTAYDSIEGAFEGRDCVVNLVALSPLFQPPGDKSHE-GVHLRGTENAIRATEA 101
Query: 194 ADEPPHVEGDVVKPDA--------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
D P V+ + D + E + ++ +W FRP + G G
Sbjct: 102 HDVPRFVQQSALGADPNGPTAYIRAKGRAESVVRDSDLDWTIFRPSVVFGDGGEFVS--- 158
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F ++ P+P G V DL ML AVE+ ++ + + A+TL
Sbjct: 159 FTKKVTPPYLAPLPRGGRTRFQPIWVGDLVPMLADAVED-DSHVGETYEIGGPAALTLAD 217
Query: 306 MAKLCAQAAGLPVEIV 321
+AKL +A G PV +V
Sbjct: 218 VAKLAYRAEGKPVSVV 233
>gi|196038034|ref|ZP_03105344.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
gi|196031304|gb|EDX69901.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
Length = 328
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGIENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|423402075|ref|ZP_17379248.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|423477234|ref|ZP_17453949.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
gi|401651974|gb|EJS69534.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|402430861|gb|EJV62934.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
Length = 328
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|419780605|ref|ZP_14306448.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK100]
gi|383184981|gb|EIC77484.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK100]
Length = 326
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLARACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLNACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|425449032|ref|ZP_18828876.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
gi|389765118|emb|CCI08928.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
Length = 326
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISENFSN----WA 226
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + E + W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIEIAKDSDMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|333979172|ref|YP_004517117.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822653|gb|AEG15316.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 319
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVWGD 140
+GG IG +L LL G VT++ +N D P R N + + V D
Sbjct: 7 TGGAGFIGSHLVDRLLSEGWRVTVV----DNFDPFYDPGIKRRNIAPHLEYSNYTLVEAD 62
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++ + ++ +DV++ K N+ + + + A+ GVKQF
Sbjct: 63 IRDMETLRQRLSGEYDVIVHLAAKAGVRPSIRDPIGYQEVNVRGTQNLLELAREWGVKQF 122
Query: 183 LFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYISENFSN-----WASFRPQYM 233
+F SS+ +Y P E D V P A + + +S+ + + R +
Sbjct: 123 IFASSSSVYGVNPNVPWREDDCVLMPISPYAATKVAGELLGHVYSHLYGIRFIALRLFTV 182
Query: 234 IGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G D F R +++ P+PI G G + ++ D+ + A++ E + I
Sbjct: 183 YGPRQRPDLAIHKFARKMLKGEPIPIYGDGTSRRDYTYIDDVIQGMRAAMDYTE-SQYEI 241
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI--------DAKKAFPFR 339
NL +++ V+L M + + G+ + P+ + +A++ FR
Sbjct: 242 INLGNNKTVSLLEMVRALEEVFGVKARLEILPPQPGDVPSTWANVENARRLLGFR 296
>gi|402493409|ref|ZP_10840162.1| UDP-N-acetylglucosamine 4-epimerase [Aquimarina agarilytica ZC1]
Length = 332
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
A+ + VK+F++ +S+ Y + P VE + P + + + KY++E ++N +F+ Y
Sbjct: 118 ARDNNVKRFIYAASSSTYGDSISMPKVEDKIGNPLSPYA-ITKYVNELYAN--NFKKTYN 174
Query: 234 IGS---------GNNKD--------CEEWFFDRIVRKRPVPIPGSG---MQFTNIAHVRD 273
+ + G +D ++ + + PV I G G FT I +V
Sbjct: 175 LDTIGLRYFNVFGRKQDPNGAYAAVIPKFVMQLMKHESPV-INGDGSYSRDFTYIDNVIQ 233
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
++ ML +A +N EA + N++N TL+ + L + + YDPK AG++ K
Sbjct: 234 MN-MLAMASDNSEALN-NVYNTAFGERTTLNELTSLLKENLSM------YDPKIAGVEIK 285
>gi|418474583|ref|ZP_13044068.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
gi|371544795|gb|EHN73470.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
Length = 284
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 78/204 (38%), Gaps = 22/204 (10%)
Query: 153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------PADEPPHVEGDVVK 206
+D V+D AVR A + +++++SS +Y A++ P VEG
Sbjct: 1 WDAVVDTWSAAPRAVRNAARLLRDR-AGRYVYVSSRSVYAWPPPAGCAEDAPLVEG--AS 57
Query: 207 PDAGHVQV-------EKYISENFSNWASF--RPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
DAG E +S+ F S R ++G N W+ DR+ R PV
Sbjct: 58 ADAGQSDYARDKRGGELAVSDAFGADRSVLVRAGLILGPYENIGRLPWWLDRVARGGPVL 117
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
PG VRDL+ AVE N+ L T+ G+ CA G
Sbjct: 118 APGPRELPVQYIDVRDLADWTLGAVERELGGPYNL-GLPRRGHTTMGGLLDACATVTGGT 176
Query: 318 VEIVHYDPK---AAGIDAKKAFPF 338
E+ DP AAGI+ P
Sbjct: 177 AELRWTDPGTVLAAGIEPWVQLPV 200
>gi|332668502|ref|YP_004451518.1| NmrA family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337547|gb|AEE54645.1| NmrA family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 289
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+P+ D K GVK +F+S G VE + P H ++E+ I ++ +
Sbjct: 88 KPIVDTCKDEGVKHIVFLSVQG----------VENSKIIP---HHKIERLIVDSKIPYTF 134
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP Y + + + ++ K+ + +P +FT I VRD+ + + N A
Sbjct: 135 LRPAYFMQNFTTTLRHD-----LIHKQQIYLPAGRAKFTLID-VRDIGEVAAKILINISA 188
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
+ ++L ++T MA++ ++ G+ +
Sbjct: 189 HINQSYDLTCKESLTFSEMAEILSRNLGIDIR 220
>gi|301060431|ref|ZP_07201290.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
gi|300445485|gb|EFK09391.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
Length = 312
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 123 FNRFNEIVSAGGKT-VWGDPAEVGNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKS-- 176
FNR + ++ G T + GD +V G + + V+D G++ AD AK
Sbjct: 32 FNRGHVPLNMAGVTEIVGDRRNEAEIVKGMPLLDWHAVIDFCGES------DADLAKMLE 85
Query: 177 ---SGVKQFLFISSAGIYK-----PADE------PPHVEGDVVKPDAGHVQVEKYISENF 222
+ +++IS+ IY+ P +E P +E + P A K++ E
Sbjct: 86 FLPGKIDHYIYISTTSIYENTTNLPVNEDAPKLSAPQLE---LGPLAADYAFNKWLCERK 142
Query: 223 SN---------WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
+ RP + G N E +FFD I PV +P + + N +V D
Sbjct: 143 LQFECPRRGIAYTCLRPVIIYGPYNYAPRETYFFDLISNNEPVIVPDNDLPLFNFLYVVD 202
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA----KLCAQ 312
L+ ++ + N + + FN+ S++ V+ G+ K+C++
Sbjct: 203 LAKIIQECIGNRDVFNQA-FNVCSEQLVSYQGLMDVFEKVCSK 244
>gi|229116562|ref|ZP_04245949.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock1-3]
gi|423379145|ref|ZP_17356429.1| hypothetical protein IC9_02498 [Bacillus cereus BAG1O-2]
gi|423447588|ref|ZP_17424467.1| hypothetical protein IEC_02196 [Bacillus cereus BAG5O-1]
gi|423546354|ref|ZP_17522712.1| hypothetical protein IGO_02789 [Bacillus cereus HuB5-5]
gi|423623851|ref|ZP_17599629.1| hypothetical protein IK3_02449 [Bacillus cereus VD148]
gi|228666872|gb|EEL22327.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock1-3]
gi|401129999|gb|EJQ37668.1| hypothetical protein IEC_02196 [Bacillus cereus BAG5O-1]
gi|401180923|gb|EJQ88077.1| hypothetical protein IGO_02789 [Bacillus cereus HuB5-5]
gi|401257774|gb|EJR63971.1| hypothetical protein IK3_02449 [Bacillus cereus VD148]
gi|401633591|gb|EJS51368.1| hypothetical protein IC9_02498 [Bacillus cereus BAG1O-2]
Length = 341
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD + + +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 193 --------------PADEPPHVEGDVVKP----DAGHVQVEKYISENFSNW----ASFRP 230
+D VE + P A V EK +EN+ W R
Sbjct: 103 LHHIKEDYILQPEPTSDRIKAVENGEISPYEHYGALKVLCEKE-AENY--WPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G + D ++ R+ + V +PG + + ++D++S VEN +A +
Sbjct: 160 GLLSGMFDYTDRLPYWVQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMVENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
NI + +T++ + C + E V D
Sbjct: 220 NITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|423668832|ref|ZP_17643861.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
gi|401300280|gb|EJS05873.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
Length = 328
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|325276930|ref|ZP_08142617.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
gi|324097945|gb|EGB96104.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
Length = 314
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +LA LL SG V ++ + G ++ ++ P + + GD
Sbjct: 14 TGGAGFIGSHLADALLASGRTVRVLDNLSTGKRSNLQLANPRL-----------QLIEGD 62
Query: 141 PAE---VGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
A+ V V G + D + + N V + + +GVK+ L
Sbjct: 63 VADAVLVAQAVSGCQAVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRLAGVKRVL 122
Query: 184 FISSAGIYKPADEPPHVEGDVVK----PDAGHVQVEKYISENFSNWASFRP---QYMIGS 236
F SSA +Y E + D K P A +Y + + P ++
Sbjct: 123 FASSAAVYGNNGEGASIAEDTPKAPLTPYASDKLASEYYLDFYQRQHGVEPVVFRFFNIY 182
Query: 237 GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G +D F +R + PV + G G Q + V DL +L +E P A +
Sbjct: 183 GPRQDPSSPYSGVISIFAERSQKSLPVSVFGDGEQTRDFVFVSDLIKLLMQGLERPGAVT 242
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ N+ ++A +L+ + +Q G E V+Y P G
Sbjct: 243 GAV-NVGLNQATSLNQVLAALSQVLGKTPE-VNYQPARPG 280
>gi|428205758|ref|YP_007090111.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428007679|gb|AFY86242.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 318
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 24/170 (14%)
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
G + G + N DA+ +A+ AK++GV +F+++SS +Y +E E
Sbjct: 57 HTGEICGTQALHPQIAGNLHYRDAMH-LANLAKAAGVSRFIYLSSCSVYGAGEEEYVTEE 115
Query: 203 DVVKPDAGHVQVEKYISENFSNWAS-------FRPQYMIGSG---------NNKDCEEWF 246
V+P + I + AS RP G+ NN W
Sbjct: 116 SPVRPQTPSATCKAAIESDLLTIASAEFSPTILRPAIAFGASPRIRFDVVLNNMAGLAWT 175
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNL 295
++I IPG G+ + + HV D+ ++ ++ P IFN+
Sbjct: 176 ANKI------NIPGKGLSWCPVVHVLDICQIINCILQAPRPLVHQQIFNV 219
>gi|407368381|ref|ZP_11114913.1| NAD-dependent epimerase/dehydratase [Pseudomonas mandelii JR-1]
Length = 309
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPKVELVVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMLGCSAVAHLAAVASVQASV--DDPVKTHRSNFIGSLNVCEAMRQAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLASEYYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEQPQVEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A +L M + G LP V Y P +G
Sbjct: 242 VGWNQATSLKQMLEALEVVVGQLPP--VSYGPARSG 275
>gi|406919632|gb|EKD57873.1| hypothetical protein ACD_57C00116G0001 [uncultured bacterium]
Length = 302
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 33/243 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV----WG 139
+GG IG ++ ++LL +GH+V ++ +N KK + + + A + + +
Sbjct: 6 TGGAGFIGSHVTRQLLDAGHKVVVV----DNLSCGKKESVDSRAQFIEADIRNIPDSAFK 61
Query: 140 DPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ V ++ G + +++ K N+ + + + +GVK+ +F SSA +Y D
Sbjct: 62 NVDSVIHMAGLIIVPESVEDPIKYADNNVIGTIGLLESMRKNGVKKIIFSSSACVYGTPD 121
Query: 196 EPPHVEGDVVKPD----AGHVQVEKYISENFSNW-------ASFRPQYMIGSGNNKDCEE 244
P E V+PD A +E ++ +N+ F P G G + E
Sbjct: 122 TLPIKEDAPVRPDNPYGASKAAIEAFLQAYNANFNFDVTILRYFNPY---GPGEMHEPET 178
Query: 245 W----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + K+P+P+ +G Q + ++ DL + VE NIFN+ +++
Sbjct: 179 HAIPNFIKAALSKKPIPLYWNGAQIRDFIYIEDL---VRAHVEVINQTGLNIFNIGTEKG 235
Query: 301 VTL 303
V +
Sbjct: 236 VVV 238
>gi|423384592|ref|ZP_17361848.1| hypothetical protein ICE_02338 [Bacillus cereus BAG1X1-2]
gi|423529049|ref|ZP_17505494.1| hypothetical protein IGE_02601 [Bacillus cereus HuB1-1]
gi|401639262|gb|EJS57001.1| hypothetical protein ICE_02338 [Bacillus cereus BAG1X1-2]
gi|402449917|gb|EJV81752.1| hypothetical protein IGE_02601 [Bacillus cereus HuB1-1]
Length = 341
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 43/240 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R V + A +K ++FISS +YK
Sbjct: 47 ---GDRNNNVSSLENRKWDVVVDTCGFSPHHIRNVGE-ALHDNIKHYIFISSLSVYKDWI 102
Query: 196 EPPHVE----------GDVVKP-DAGHVQVEKYI--------SENFSNW----ASFRPQY 232
PPH++ GD +K + G V +Y E W R
Sbjct: 103 -PPHIKEDYILQSEPTGDQIKAVENGEVSPYEYYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN +A + NI
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKGRPVQIVDIKDVANWGLNMAENNKAGTFNI 221
>gi|86740009|ref|YP_480409.1| methyltransferase FkbM [Frankia sp. CcI3]
gi|86566871|gb|ABD10680.1| Methyltransferase FkbM [Frankia sp. CcI3]
Length = 619
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 27/242 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG +G + L GH V + D + K+++ G TV GD
Sbjct: 6 TGGTGFLGSRVVDRALADGHRVVGLARSDAAATKLRR-----------HGAGTVRGDLDD 54
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
PA + + +++ + A+++G+++ +F+S+ GI+ D P
Sbjct: 55 PATLLPAFREANCEALINIASLGFGHAETIVTAARAAGIRRAVFLSTTGIFTTLDPPSKR 114
Query: 201 EGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIP 259
V E I+ + +W RP + G ++++ ++R+ PV P+P
Sbjct: 115 I---------RVAAEGTIAASGLDWTIIRPTMIYGGPDDRNMARLLA--LLRRVPVLPVP 163
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G HV DL+ + L AA +++ A+T + A G V
Sbjct: 164 GGGHHLQQPVHVEDLARTV-LRATTTAAAIGRAYDVAGPEALTFRQVVITAGAAVGRRVI 222
Query: 320 IV 321
V
Sbjct: 223 CV 224
>gi|410091941|ref|ZP_11288486.1| NAD-dependent epimerase/dehydratase [Pseudomonas viridiflava
UASWS0038]
gi|409760729|gb|EKN45851.1| NAD-dependent epimerase/dehydratase [Pseudomonas viridiflava
UASWS0038]
Length = 309
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 36/281 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLARGHAVRILD--DLSAGKRSNLPLDNPKVELIVGDVADAALVSR 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+A G A V +V V D + + N V + + +GVK+ +F SSA +
Sbjct: 67 AAQGCQAVVHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMREAGVKRVIFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E + D K +K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGQAITEDTTKAPLTPYASDKLASEFYLDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +RI + P+ + G G Q + ++ DL +L +E ++A N
Sbjct: 183 PSSPYSGVISIFAERIEKGLPITVFGDGEQTRDFFYIGDLVKLLLQGLE-LDSAIEGAVN 241
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+ ++ +L+ + AQ G ++ + P++ I +A
Sbjct: 242 VGLNQTTSLNELLAALAQVTGKQPQVSYQAPRSGDIKHSRA 282
>gi|423396476|ref|ZP_17373677.1| hypothetical protein ICU_02170 [Bacillus cereus BAG2X1-1]
gi|401651783|gb|EJS69344.1| hypothetical protein ICU_02170 [Bacillus cereus BAG2X1-1]
Length = 341
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNGGHEVTLFNRGTNNE---------IFPEVEQLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + N +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 49 RN-GDVLSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ RI + V +PG + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRIAKGGKVLVPGRKDRPVQFVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNYEMTMEELLNTCKKVTNSDAEFVWID 251
>gi|399577284|ref|ZP_10771037.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
gi|399237667|gb|EJN58598.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
Length = 294
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 47/272 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL++ GG IG L++EL+ GH+VT++ + P + + V K
Sbjct: 2 KVLVI----GGSGFIGTNLSRELVDRGHDVTVLA---------RNPEDDELPDSV----K 44
Query: 136 TVWGDPAEVGNVVG------GVTFDVVLD-------NNGKNLD----AVRPVADWAKSSG 178
TV GD + ++ G V F V L + K+L+ A++
Sbjct: 45 TVSGDVTDYDSIEGAFEGQNAVIFLVALSPLFKPKGGDQKHLEIHLGGTENAVKAAEAHD 104
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
VK+F+ +S+ G P ++ Q E + + W FRP + G G
Sbjct: 105 VKRFIQMSALGA-DPDGPTAYIR--------AKGQAENVVQASELKWTIFRPSVVFGEGG 155
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F ++ P+PG G V DL ML A+++ +A + +
Sbjct: 156 EFVS---FTKKLAPPYVTPLPGGGKTRFQPIWVDDLVPMLADALDD-DAHVGKTYEVGGP 211
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+TL +AKL A G V +V AG+
Sbjct: 212 ERLTLAEVAKLAHGADGRSVTVVPIPMGLAGV 243
>gi|419963330|ref|ZP_14479306.1| UDP-galactose 4-epimerase [Rhodococcus opacus M213]
gi|414571263|gb|EKT81980.1| UDP-galactose 4-epimerase [Rhodococcus opacus M213]
Length = 330
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEDAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + ++NL + ++ + C + G +
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTGRTI 269
>gi|241204373|ref|YP_002975469.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858263|gb|ACS55930.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 317
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TV----WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + G V GV D+V+D +L++ + A S V FL + +
Sbjct: 51 QMDRAAMEQTGDFGPAVRGVKADIVIDMICFSLESAEHLVT-ALSGHVGHFLHTGTIWTH 109
Query: 192 KPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMIGS 236
+ P +E GD A +E Y+ + A R P +++G
Sbjct: 110 GHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIVGP 162
Query: 237 G-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N + + F + R + +P G++ + H D+++M A+ N A++
Sbjct: 163 GWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNAST 220
Query: 290 SNIFNLVSDRAVTLDGMAK 308
F+ VS++A+TL G A+
Sbjct: 221 GESFHAVSEQALTLRGYAE 239
>gi|448361018|ref|ZP_21549643.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445652391|gb|ELZ05287.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 347
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYI 218
+D R V A GV++ +ISS +Y D P E + V P +Q EK +
Sbjct: 84 TIDGTRNVLWAAHEGGVERVCYISSTAVYGTHDTHPITEESPLEGVGPYGEAKIQAEK-V 142
Query: 219 SENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
E+F RP+ IG + FD I VP+ G G + HV DL
Sbjct: 143 CEDFRRMGLCVPILRPKTFIGP-QRLGVFQVLFDWIEDGANVPLVGWGTNQYQLLHVHDL 201
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ + L + + + A ++ FN+ +D T+
Sbjct: 202 LTAIDLLLTDDKEAVNSTFNVGTDEFTTM 230
>gi|432333402|ref|ZP_19585184.1| UDP-galactose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
gi|430779679|gb|ELB94820.1| UDP-galactose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
Length = 330
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEDAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + ++NL + ++ + C + G +
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTGRTI 269
>gi|146308888|ref|YP_001189353.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp]
gi|145577089|gb|ABP86621.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp]
Length = 306
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 114/289 (39%), Gaps = 53/289 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL +GH V ++ ++G ++ + P RF E A D
Sbjct: 7 TGGAGFIGSHLVDALLAAGHGVCVLDNLSMGKRSNLPLDNPRL-RFIEGDVA-------D 58
Query: 141 PAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A+V + G + D + + N V + + GV++ L+ S
Sbjct: 59 AAQVEQAMAGCDAVAHLAAVASVQASVDDPVATHQSNFIGTLNVCEAMRRHGVRRVLYAS 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSG 237
SA +Y E ++ D K V+K SE + ++ A FR + GS
Sbjct: 119 SAAVYGNNGEGLAIDEDTAKAPLTPYAVDKLASEQYLDFYRRQHGLEPAVFRFFNIFGSR 178
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-----VENPEA 287
+ F R + +P+ + G G Q + +V DL +L VE P
Sbjct: 179 QDPSSPYSGVISIFTQRAQQGQPISVFGDGEQTRDFFYVGDLIELLLQGLFGEVVEQP-- 236
Query: 288 ASSNIFNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
N+ ++AV+L +A++ A GLP + H +A I +A
Sbjct: 237 -----VNVGWNQAVSLKQLLAEIGALCGGLP-PVTHLPARAGDIRHSRA 279
>gi|116251770|ref|YP_767608.1| hypothetical protein RL2007 [Rhizobium leguminosarum bv. viciae
3841]
gi|424870251|ref|ZP_18293913.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|115256418|emb|CAK07500.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|393165952|gb|EJC65999.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 317
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVDAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TV----WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + G V GV D+V+D +L++ + A S V FL + +
Sbjct: 51 QMDRAAMEQTGDFGPAVRGVKADIVIDMICFSLESAEHLVT-ALSGHVGHFLHTGTIWTH 109
Query: 192 KPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMIGS 236
+ P +E GD A +E Y+ + A R P +++G
Sbjct: 110 GHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIVGP 162
Query: 237 G-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N + + F + R + +P G++ + H D+++M A+ N A++
Sbjct: 163 GWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNAST 220
Query: 290 SNIFNLVSDRAVTLDGMAK 308
F+ VS++A+TL G A+
Sbjct: 221 GESFHAVSEQALTLRGYAE 239
>gi|306825999|ref|ZP_07459335.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304431715|gb|EFM34695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 326
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TV----GDENSDK 117
KKVL+ +G +G Y+ +EL SG++V TV GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNSKVGQSLETSTVAFFQGDLTKHE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG +D N+ + V + +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACQE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLFEDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|301054551|ref|YP_003792762.1| isoflavone reductase [Bacillus cereus biovar anthracis str. CI]
gi|300376720|gb|ADK05624.1| possible isoflavone reductase [Bacillus cereus biovar anthracis
str. CI]
Length = 340
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ +R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIERVAKGGKVLVPGRKTRPVQIVDIKDVANWGLNMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|218530267|ref|YP_002421083.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
CM4]
gi|218522570|gb|ACK83155.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
CM4]
Length = 307
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 AGIYKPADEP-PHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+ P P E D +P + E+ ++E +W + RP + G+G +
Sbjct: 115 IRAQAGSSAPVPLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVKGNM 174
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
++ R P P+P ++A R L S+ +LA
Sbjct: 175 AALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|229173888|ref|ZP_04301426.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus MM3]
gi|228609526|gb|EEK66810.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus MM3]
Length = 326
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 86 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTEDVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 234
>gi|260576531|ref|ZP_05844520.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2]
gi|259021254|gb|EEW24561.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2]
Length = 306
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 48/240 (20%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--- 141
GG IG +L ELL +GH V + D + ++ + SAG V GD
Sbjct: 7 GGSGFIGSHLVDELLAAGHRVRVF---DRSPERFRAA---------SAGVDLVQGDLGDT 54
Query: 142 -------AEVGNVVGGVT--------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
++VG V V+ D D G ++ VR + + +++ V++ +++S
Sbjct: 55 ALLAEALSDVGQVFHLVSTTVPATSNLDPAADIRGNLINTVR-LLELMRAAKVRRMVYLS 113
Query: 187 SAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYIS-ENFSNWASFRPQYM------- 233
S G +Y P E ++P + + V VE Y+ E + + P +
Sbjct: 114 SGGTVYGIPQTDPVAETHRLQPISSYGIVKVAVENYLMMEAYLH--GLEPVILRASNPYG 171
Query: 234 --IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
G G + F +I + P+ I G G + HVRDL+ + LA E + N
Sbjct: 172 PRQGHGGVQGVIGTFLWKIAQGDPIQIWGDGSVVRDFIHVRDLAQLCVLAAETGIVGTFN 231
>gi|115523528|ref|YP_780439.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115517475|gb|ABJ05459.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 337
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 48/245 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK--PPFNRFNEIVSAGGKTVWGD- 140
+GG G L +LL SG++ T+ SD + K P F K V GD
Sbjct: 11 TGGAGYAGSLLVPQLLNSGYKATVYDTCFFGSDFLPKDNPNF-----------KLVEGDI 59
Query: 141 --PAEVGNVVGGVTFDVV-------------LDNN---GKNLDAVRPVADWAKSSGVKQF 182
A++ G+ D V LD N NLDA P+ AK +GVK+F
Sbjct: 60 RDTAKLAQAFQGI--DCVVSLACISNDASFELDENLSTSINLDAFEPMVLAAKKAGVKRF 117
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMI 234
++ SS+ +Y ++ P E + P + + ++K+ ++F FRP +
Sbjct: 118 VYASSSSVYGVSEHPDVTEDHPLLPLTLYNKYKGMCEPLLQKHADDSFVGVI-FRPATLC 176
Query: 235 GSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SS 290
G + + + V + + G G N+ HV+D + L + P A
Sbjct: 177 GYAPRQRLDLSVNILTNHAVNNNKITVFGGGQMRPNL-HVQDYCDAVELLMTAPAAKIQK 235
Query: 291 NIFNL 295
IFN+
Sbjct: 236 QIFNI 240
>gi|300712100|ref|YP_003737914.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448295790|ref|ZP_21485853.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299125783|gb|ADJ16122.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445583219|gb|ELY37551.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 328
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 40/277 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEIVSAGGKTVWGDP 141
GG IG + ELL +EVTI G+ + PF R N + AG + D
Sbjct: 8 GGTRFIGRHTVTELLDHDYEVTIFNRGNHEN------PFAEEERVNHV--AGDRN---DQ 56
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ + D+V+D + VR + + +++++SS Y A+ P E
Sbjct: 57 TALEAAAVSIAPDLVIDCVAYRPEQVRRATEAFADA---RYVYVSSGSSYG-AEHVPKRE 112
Query: 202 GDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCE 243
G+ Q E + + + RP + G + +
Sbjct: 113 GETPLEPCSAEQASDDSPETYGARKAEGDRAVMEAADRGIDAMALRPCIVYGPHDYTERL 172
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ V +PG G + +V D++S L + E+ +N+ R +TL
Sbjct: 173 DYWIDRVLTHDRVVVPGDGQHLWHRVYVEDVASALRVVGES--GVPGEAYNVGDRRLLTL 230
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
+ A+ AG V++V + AAG + + FP
Sbjct: 231 RETLETIAEVAGTAVDVVTAGERELAAGGLSSEEFPL 267
>gi|408484411|ref|ZP_11190630.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. R81]
Length = 310
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 28/277 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV--SAGGKTVW 138
+GG IG +L + LLG G+++ ++ + G + + P V SA +
Sbjct: 9 TGGAGFIGSHLVEALLGKGYKIRVLDNLSTGKVANLPVAHPDLELMIGDVADSAVVEQAM 68
Query: 139 GDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
D + V ++ + +D+ + N V +GV + +F SSA Y
Sbjct: 69 ADCSAVVHLAAVASVQASVDDPVATHQANFVGTLNVCQSMLKAGVTRVVFASSAATYGNN 128
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD---- 241
E + D K +K SE + ++ +R ++ + G +D
Sbjct: 129 GEGTAIAEDTPKSPLTPYASDKLASEYYLDF--YRREHGLEPVIFRFFNIFGPRQDPSSP 186
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F +R + +P+ + G G Q + +V+DL S+L AVE E A I N+
Sbjct: 187 YSGVISIFTERALAGKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPAPEAI-NVGLS 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
R+ +L+ + A G + + + P+ I +A
Sbjct: 246 RSTSLNDLIAELGNATGTALNVTYQAPRQGDIRHSRA 282
>gi|209549063|ref|YP_002280980.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534819|gb|ACI54754.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 317
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 39/255 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GH +G YL L+ +GH+V ++ G P+ S +
Sbjct: 2 RILVIGAT--GH--VGTYLVPRLVEAGHDVVTISRG-------AAKPYTENRAWASVDQR 50
Query: 136 TVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D AE+ G V V D+V+D L++ + A S V FL +
Sbjct: 51 RM--DRAEMERTGDFGPAVRDVKADIVIDMICFTLESAEQLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFR--------PQYMIGSG--- 237
+ P +E + K G ++K E + A R P +++G G
Sbjct: 108 THGYPSAVPTLE-EAPKSPFGDYGIQKAAIETYLLQQARLRGFPATIIHPGHIVGRGWAP 166
Query: 238 ----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
N + + F + R + +P G++ + H D+++M A+ N A++ F
Sbjct: 167 LNPAGNFNLQ--VFSTLARGDALALPNFGLETVHHVHADDVAAMFMGAIANWNASTGESF 224
Query: 294 NLVSDRAVTLDGMAK 308
+ VS++A+TL G A+
Sbjct: 225 HAVSEQALTLRGYAE 239
>gi|384105020|ref|ZP_10005955.1| UDP-galactose 4-epimerase [Rhodococcus imtechensis RKJ300]
gi|383836870|gb|EID76272.1| UDP-galactose 4-epimerase [Rhodococcus imtechensis RKJ300]
Length = 330
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEEAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + ++NL + ++ + C + G +
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTGRTI 269
>gi|304408273|ref|ZP_07389921.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus
YK9]
gi|304342742|gb|EFM08588.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus
YK9]
Length = 338
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 100/261 (38%), Gaps = 42/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG I + K+LL G E+ ++ G N E + AG + + D
Sbjct: 7 GGTGTISTAITKQLLAQGCELYLLNRGTRN-------------EELPAGARILQADINDE 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVA---DWAKSSG-VKQFLFISSAGIYK-PADE 196
A V ++ +FDVV D A P D+ G KQF+FISSA Y+ P +
Sbjct: 54 ARVAELIADHSFDVVAD-----FIAFVPEQLERDYRLFHGKTKQFMFISSASAYQTPLSD 108
Query: 197 PPHVEGD-----VVKPDAGHVQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDC 242
EG + + E+Y+ + + RP + I G +
Sbjct: 109 YRITEGTPLSNPCWEYSRNKIACEEYLVKQYREQGFPITIVRPSHTYDERSIPLGVHGSK 168
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W R++ +PV I G G + H D + + N A ++ + SD V
Sbjct: 169 GTWQVAKRMLENKPVIIHGDGTSLWTMTHNSDFAKGFIGLMGNLHAIGESV-QITSDETV 227
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G+ + VH
Sbjct: 228 TWNQVYESIASALGVKLNAVH 248
>gi|395446888|ref|YP_006387141.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida ND6]
gi|388560885|gb|AFK70026.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida ND6]
Length = 310
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|229173694|ref|ZP_04301236.1| NAD-dependent epimerase/dehydratase [Bacillus cereus MM3]
gi|228609793|gb|EEK67073.1| NAD-dependent epimerase/dehydratase [Bacillus cereus MM3]
Length = 341
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 49/290 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGDQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN +A I
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKNRPVQIVDIKDVANWGLNMAENNKAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
FN+ + +T+ G+ C + E V + + ++ K P+ M
Sbjct: 219 FNVTGPNYELTMAGLLNTCKKVTNSDAEFVWVE--ESFMNEHKVQPWTEM 266
>gi|153808796|ref|ZP_01961464.1| hypothetical protein BACCAC_03096 [Bacteroides caccae ATCC 43185]
gi|149128622|gb|EDM19840.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
caccae ATCC 43185]
Length = 291
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVLI +G ++ +G + K L+ + E + TV D + K F +++ + G
Sbjct: 2 KKVLI----TGANSFVGTSIEKWLMKTPEEFQVDTV-DTMNGVWKTTDFTKYDAVFHVAG 56
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
E+ ++ V N D +A WAK GVKQF+F+SS +YK +
Sbjct: 57 IAHVDPKPEMKSLYYRV-----------NTDLTVEIAIWAKEHGVKQFIFMSSGIVYKAS 105
Query: 195 DEPPHVEGDVVKPDA--------GHVQVEKYISENFSNWASF-----RPQYMIGSGNN 239
++GD+ D G +++ I N + ++F RP + G GN
Sbjct: 106 KS---LKGDIKTMDTKPCPNDFYGDSKLQAEIGLNKLDCSTFKVCILRPPMIYGVGNK 160
>gi|418721930|ref|ZP_13281101.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. UI 09149]
gi|410741240|gb|EKQ89996.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. UI 09149]
Length = 311
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 159 NNGK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--- 213
N GK NLDA RP+ + +K VK+F++ SS+ +Y DEP E ++P + +
Sbjct: 72 NLGKSINLDAFRPLVEISKKHAVKRFIYASSSSVYGIKDEPNVTEDFSLEPLTDYSKFKA 131
Query: 214 -----VEKYISENFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQF 265
+ +Y +++F+ + RP + G + + + KR + + G
Sbjct: 132 DCEKILNEYQTDHFTT-VTIRPATVCGYSPRQRLDVVVNILTNLAYHKREISVFGGAQLR 190
Query: 266 TNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
NI H+ D+ + + + P E + I+N T+ +A + + G V++V
Sbjct: 191 PNI-HIDDMVDVYLVLLRAPKEKIAGEIYN-AGYLNFTVSEIANMVKEVVGEDVKLV 245
>gi|424919048|ref|ZP_18342412.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392855224|gb|EJB07745.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 326
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH+V++ G N+ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAEGHQVSVYNRGLRNAGLPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D A+ GN +DVV D V R + ++ S G Q++FISSA +Y
Sbjct: 55 GAYADLAK-GN------YDVVCQFIAFTPDQVARDIEVFSGSCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGSG-----NN 239
++PP E + P + Q + E A+ RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPHWPYSQAKIACEELLKQSANLACTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P+ + G G + D + + + +AA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPIIVAGDGHTPWTLTRSIDFAVPF-VGLFGKQAALNEIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ G
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHVPTDTLIRYNPEWVG 256
>gi|418292867|ref|ZP_12904797.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064280|gb|EHY77023.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 309
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG L LL G+ V ++ + ++ K + P + E+V D A
Sbjct: 9 TGGAGFIGSNLVDALLARGYAVRVLD--NLSTGKRENLPQDERVELVVGD----VADAAC 62
Query: 144 VGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
V V G + D + NL + + + +GVK+ LF SSA
Sbjct: 63 VRRAVQGCQAVVHLAAVASVQASVDDPFGTHQSNLIGTLNLCEAMREAGVKRVLFASSAA 122
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 123 VYGNNGEGQAIDEDTPKAPLTPYAADKLASEHYLDF--YRRQHGLEPVVFRFFNIFGPRQ 180
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R + P+ + G G Q + +V DL +L A+E+PEA +
Sbjct: 181 DPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVADLVEVLVQALESPEAPEGAV- 239
Query: 294 NLVSDRAVTLDGM 306
N+ ++A +L+ +
Sbjct: 240 NVGLNQATSLNQL 252
>gi|374604187|ref|ZP_09677154.1| hypothetical protein PDENDC454_14522 [Paenibacillus dendritiformis
C454]
gi|374390173|gb|EHQ61528.1| hypothetical protein PDENDC454_14522 [Paenibacillus dendritiformis
C454]
Length = 332
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 108/273 (39%), Gaps = 66/273 (24%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI--------------------MTVGDENS----DKMK 119
+G +G LA+ L +G +VT + +GD+++ + +
Sbjct: 6 TGATGFLGMCLARRLHQAGWDVTAVGRDKGRGARLTAAGIRFLPLDLGDQDAVLRAGEQQ 65
Query: 120 KPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV 179
+ F+ AG TVWG A D + N+ A + + A+ G
Sbjct: 66 QAVFH------CAGLSTVWGTYA---------------DFHAGNVTATEHLLEAAQRHGA 104
Query: 180 KQFLFISSAGIY----------KPADEPPHVEGDVVKPD-AGHVQVEKYISENFSNWASF 228
++F+F+S+ +Y + + P D V+ V+V + + S
Sbjct: 105 QRFVFVSTPSVYFDYTDRLEVGEDSKLPARFANDYVRTKYMAEVRVREAMDGGLSA-IIL 163
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
RP+ + G G+ F R++R +R +P+ G ++ +V +++ L P
Sbjct: 164 RPRALFGPGDRA-----LFPRLMRANRERGIPLIDGGRALLDLTYVDNVAEALICCASAP 218
Query: 286 EAASSNIFNLVSDRAVT-LDGMAKLCAQAAGLP 317
E+A ++N+ + + +D + +L A+ P
Sbjct: 219 ESACGQVYNISNGEPIRFIDAVNRLFAEMGETP 251
>gi|429195815|ref|ZP_19187815.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
gi|428668472|gb|EKX67495.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
Length = 310
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---------SNWASF 228
G + LF S++ IY E V +P + + + K +SE+
Sbjct: 99 GAEHLLFCSTSEIYGDGTGRVLSEDAVARPHSLYGRA-KLLSESVVAEFARSPGRRATVV 157
Query: 229 RPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-- 285
RP + G G D F + R P+ + G G Q +V DL++ + A+ P
Sbjct: 158 RPFNVYGPGQRPDFVVSRFVELASRGEPLTVHGDGAQIRTFTYVDDLAAGMWAALCRPAS 217
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
E A I+NL S + ++ + ++ AG +V P AG DA + R
Sbjct: 218 EGAPFEIYNLASQQTFSITEVVEMVNDLAGSDSPVVRISPGEAGRDAAQEVTVR 271
>gi|403378522|ref|ZP_10920579.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JC66]
Length = 345
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIYK-PADEP 197
D V ++G + FDVV D + V D+ +G KQ++FISSA Y+ P +
Sbjct: 52 DEQRVAELIGDLHFDVVADFIAFTPEQVE--RDYRLFAGKTKQYMFISSASAYQTPLSDY 109
Query: 198 PHVEGDVV-----KPDAGHVQVEKYISENFSN----WASFRPQYM-----IGSGNNKDCE 243
EG + + + E Y++ + RP + I G +
Sbjct: 110 RITEGTPLSNPYWEYSRNKIACEDYLTRQYRENGFPVTIVRPSHTYSERSIPLGVHGTKG 169
Query: 244 EW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W R++ +PV I G G + H RD ++ + N A + + SD +T
Sbjct: 170 SWQVAKRMLEGKPVLIHGDGTSLWTMTHSRDFANGFIGLMGNLHAYGEAV-QITSDETLT 228
Query: 303 LDGMAKLCAQAAGLPVEIVH 322
+ + A A G+P++ VH
Sbjct: 229 WNQIYSAIADALGVPLQAVH 248
>gi|357411246|ref|YP_004922982.1| NAD-dependent epimerase/dehydratase [Streptomyces flavogriseus ATCC
33331]
gi|320008615|gb|ADW03465.1| NAD-dependent epimerase/dehydratase [Streptomyces flavogriseus ATCC
33331]
Length = 330
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 108/279 (38%), Gaps = 51/279 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G + L G EVT+ F+R + AG +T+ GD
Sbjct: 3 GGTEFVGRAVTDAALARGWEVTV---------------FHRGHHAAPAGARTLTGDRTTG 47
Query: 143 EVG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA-----D 195
E G + T+D+V+D AVR A S F ++SS +Y +PA +
Sbjct: 48 EAGLRALADGTWDLVVDTWSGAPSAVRDAAR-LLSGRAGHFGYVSSRSVYAQPAPAGLAE 106
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFSNWASF----------RPQYMIGSGNNKDCEEW 245
+ P V G PD G V +++ A+ R ++G G N W
Sbjct: 107 DGPLVAG--ASPDDG-PDVSYALAKRGGELAALDAFGDRALLARAGLILGPGENIGRLPW 163
Query: 246 FFDRIVRKRPVPIPG---SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-V 301
+ R R V PG +G+Q+ + RDL+ L ++ S +N VS
Sbjct: 164 WLGRAARGGAVVAPGPPDAGIQYID---ARDLADWL---LDAAAGGLSGAYNTVSHPGHA 217
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
T+ + C Q G + DP+ AAG++ P
Sbjct: 218 TMGELLDACVQVTGSRARLRWTDPETLLAAGVEPWTDLP 256
>gi|312134989|ref|YP_004002327.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
owensensis OL]
gi|311775040|gb|ADQ04527.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
owensensis OL]
Length = 305
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH-- 211
DV LD + L V + ++ VK+F+F SSA +Y P E ++P++ +
Sbjct: 83 DVYLDCSINVLGTVN-LLEYCVKYKVKKFIFASSAAVYGEPKYIPIDENHPLRPESFYGL 141
Query: 212 --VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGS 261
+ E+YI + NF+ + FR + G + E F DR+ + V I G
Sbjct: 142 SKLTSEEYIRMFAHNFNFGYVIFRYSNVYGPRQDPFGEGGVVSIFCDRMQNNKDVIIFGD 201
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V D++ +A+ E+ S FNL + + V+++ + ++ + G V
Sbjct: 202 GTQTRDFIYVEDVAEANCIAL---ESFVSGTFNLSTGKNVSVNELFEILSSLTGYKNNPV 258
Query: 322 HYDPKAAG 329
Y PK G
Sbjct: 259 -YQPKRPG 265
>gi|444304648|ref|ZP_21140439.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
gi|443483063|gb|ELT45967.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
Length = 324
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
A+VG ++ TF V D NL V D A+ GV++ LF+ S+ IY K AD+P
Sbjct: 76 AKVGGILANNTFPV--DFLSDNLRIQVNVLDAAREFGVERLLFLGSSCIYPKFADQPIRE 133
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF-- 246
P + + AG + ++ + W S P + G G+N E
Sbjct: 134 DSLLTGHLEPTNDAYAIAKIAGIMHIQAVRRQYGLPWISAMPTNLYGPGDNFSPEGSHVM 193
Query: 247 ------FDRIVRK-RPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+D R PV GSG HV D+++ +EN + +S N+ +
Sbjct: 194 PALIRRYDEAARAGTPVVTNWGSGTPRREFLHVDDMAAACLHLLENYDGSSQ--VNVGTG 251
Query: 299 RAVTLDGMAKLCAQAAGLPVEI 320
VT+ +A L AQA G +I
Sbjct: 252 TDVTIRELATLVAQAVGYEGDI 273
>gi|398354232|ref|YP_006399696.1| quinone oxidoreductase 2 [Sinorhizobium fredii USDA 257]
gi|390129558|gb|AFL52939.1| quinone oxidoreductase 2 [Sinorhizobium fredii USDA 257]
Length = 295
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
LD GK L D AK +GVK L+ S P+ E V+ A H+ E
Sbjct: 81 TLDEPGKRLKQHLAAVDAAKKAGVKHILYTSM----------PNPENSVIPFAADHLGTE 130
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN-----IAH 270
I + + R W+ + + P + +G F++ I+H
Sbjct: 131 NAIKASGIPYTILR-------------NAWYMENLFLALPHALQ-TGQWFSSAGEGRISH 176
Query: 271 VR--DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
V DL+ A+E+ +A S I+ L +A+T +A L A+A G +E+VH +A
Sbjct: 177 VSRGDLAKAAAAALES-DATESRIYTLTGAQALTTAEIATLVAEATGKKLEVVHISDEA 234
>gi|196045411|ref|ZP_03112642.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225867429|ref|YP_002752807.1| hypothetical protein BCA_5599 [Bacillus cereus 03BB102]
gi|376269364|ref|YP_005122076.1| isoflavone reductase [Bacillus cereus F837/76]
gi|196023618|gb|EDX62294.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225787050|gb|ACO27267.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|364515164|gb|AEW58563.1| Isoflavone_redu, Isoflavone reductase [Bacillus cereus F837/76]
Length = 292
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V + K +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEVLKGK-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGS 236
PA D P+ V GD + D + + ++ A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGD--RNDFNYGEGKRVAEAVVFQQATFPVVAVRFPVVIGE 163
Query: 237 GNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 164 NDYTKRLQFYVEHIVRKEPVAV 185
>gi|118480476|ref|YP_897627.1| hypothetical protein BALH_4955 [Bacillus thuringiensis str. Al
Hakam]
gi|229187676|ref|ZP_04314813.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BGSC 6E1]
gi|118419701|gb|ABK88120.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|228595830|gb|EEK53513.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BGSC 6E1]
Length = 293
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 5 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 54
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V + K +++ SS +Y
Sbjct: 55 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEVLKGK-TNKYIMTSSMAVY 106
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGS 236
PA D P+ V GD + D + + ++ A+F R +IG
Sbjct: 107 TPALNLSEEDFNPYEYAIVYGD--RNDFNYGEGKRVAEAVVFQQATFPVVAVRFPVVIGE 164
Query: 237 GNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 165 NDYTKRLQFYVEHIVRKEPVAV 186
>gi|397696250|ref|YP_006534133.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida DOT-T1E]
gi|421524845|ref|ZP_15971466.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida LS46]
gi|397332980|gb|AFO49339.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida DOT-T1E]
gi|402751308|gb|EJX11821.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida LS46]
Length = 310
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|229106033|ref|ZP_04236654.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
gi|228677428|gb|EEL31684.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
Length = 314
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPF 123
+K + KKVL++ GG G +L + LL +GH+VTI T G D +K+
Sbjct: 18 MKTGMMKVKKVLVL----GGTKFFGKHLVQVLLQAGHDVTIATRGVTKDSFGSAVKRIIV 73
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+R D E+ + G ++D+V DN + +A + + K K+++
Sbjct: 74 DR-------------EDEKELAKRLEGKSYDIVYDNLCYSSNAAKRACEVLKGK-TKKYI 119
Query: 184 FISSAGIYKPA 194
SS +Y+PA
Sbjct: 120 MTSSMAVYRPA 130
>gi|111219998|ref|YP_710792.1| UDP-glucose 4-epimerase [Frankia alni ACN14a]
gi|111147530|emb|CAJ59183.1| putative UDP-glucose 4-epimerase [Frankia alni ACN14a]
Length = 309
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 97 ELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGGVTFDV 155
LL +GH+V + V SD +R +++ G T E V +V G D
Sbjct: 3 RLLDAGHDVLSLDVDSRPSDPRAT---SRQVDVLDLPGLTAALAGVEAVFHVAGMSNVDF 59
Query: 156 VLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIY----KPADEPPHVE-GDVVK 206
+ + N++ V + A+ +GV + LF S+ +Y + AD P E ++
Sbjct: 60 AYADPARTVRLNVEGTGNVCEAARQAGVARVLFASTVWVYGAVGERADPAPLTEDAEITL 119
Query: 207 PDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK-- 253
AGHV ++ S++ Y + G G +E R VRK
Sbjct: 120 GRAGHVYTSTKLAAELL-LHSYQQTYGLPFTILRYGIPYGPGMR---DELVLARFVRKAL 175
Query: 254 --RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LC 310
+ + G G QF N VRDL+ LA+ PEA ++ I L AV++ MA+ +C
Sbjct: 176 DGESLTVAGDGQQFRNYVFVRDLADAHVLAL-RPEAENATI-ALEGAEAVSVLEMAQAVC 233
Query: 311 AQAAGLPVEIVHYDP---KAAGIDAKKAF 336
+ G +E V P + + A++A
Sbjct: 234 SHFPGTAIEHVPARPGDFRGREVSAQRAL 262
>gi|407461584|ref|YP_006772901.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045206|gb|AFS79959.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 289
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + + D +K + VK+F++ S G+ K D P G + ++ EK I +
Sbjct: 87 NVQLTQKIVDLSKKAKVKKFVYTSGLGVSK--DTPL---GYFI----SKLKAEKSIINSK 137
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
N+ FRP Y++G D + ++K V IPGSG + D++ ++ ++
Sbjct: 138 INYTIFRPSYIVGKD---DLFTKHLKKSIKKNKVIIPGSGNYSIQPIFINDVTKLIFQSI 194
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
+ + ++ I +LV ++ +L Q ++ H D + A
Sbjct: 195 ID-DRFNNKIIDLVGPEIISFKKYIQLFLQKK--KTKLSHIDIEDA 237
>gi|325961845|ref|YP_004239751.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323467932|gb|ADX71617.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 341
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 26/251 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI A+ + GH +TI+ G P EI+ A + D + V
Sbjct: 20 GGTGVISTAAAERAVALGHRLTILNRGRSTR------PAPEGVEILPADVR----DASAV 69
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD 203
+ G TFD V D D + D + Q++FISSA Y KP P E
Sbjct: 70 RAALAGRTFDAVADFITYTPDQAKANLD-LFTGRAGQYVFISSASAYQKPPTLLPIREST 128
Query: 204 VVKPDAGHVQVEKYISENFSNWASFR----PQYMIGSGNNKDCEE------WF-FDRIVR 252
+K +K E +A++R P ++ + D + W R+
Sbjct: 129 PLKNPFWQYSRDKIACEELF-YAAYREQDFPLTVVRPSHTYDRTKIAMVGGWTDIHRMRA 187
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
PV + G G + H RD + + P+A + + + SD + + + +L A+
Sbjct: 188 GLPVLVHGDGTSLWTLTHSRDFAKGFVGLLGRPQAVGES-YTITSDEFLPWNQIYQLFAR 246
Query: 313 AAGLPV-EIVH 322
AAG+ E+VH
Sbjct: 247 AAGVAEPELVH 257
>gi|291336874|gb|ADD96405.1| UDP glucose 4 epimerase putative [uncultured organism
MedDCM-OCT-S09-C234]
Length = 392
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F ++I+ P+ I G+G Q ++ ++ D++ + ++ E PEA F + SD+ T++
Sbjct: 199 FMNQIMHNEPITIFGNGEQQSSFTYIDDVAPFIAISPEVPEAKQQGFF-VGSDKYYTINE 257
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDA 332
+AK A+A + H + + +DA
Sbjct: 258 VAKQTAKAMSSQFRVNHLEARKEVVDA 284
>gi|229092042|ref|ZP_04223228.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-42]
gi|228691307|gb|EEL45069.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-42]
Length = 359
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG------TNKEIFPEVKQLIGDRN- 69
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 70 ---GDVSSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 121
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 122 -PHHIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 180
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-LTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + + ++D++ L +A +N +
Sbjct: 181 LSGMFDYTDRLAYWIQRVAKGGKVLVPGRKTRPVQLVDIKDVAYFGLNMAEKN----KAG 236
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + +T++ + C + E V D
Sbjct: 237 IFNVTGPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|26987240|ref|NP_742665.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida KT2440]
gi|24981881|gb|AAN66129.1|AE016241_6 NAD-dependent epimerase/dehydratase family protein [Pseudomonas
putida KT2440]
Length = 310
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|424920606|ref|ZP_18343969.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392849621|gb|EJB02143.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 367
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD+++ LA+E P AA+ ++ N+ S +A ++
Sbjct: 226 FASRLANGQPPMIFEDGRQRRDFVHVRDVATAFRLALEKP-AAAGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLP 317
+A L A A G+P
Sbjct: 285 VATLLADAMGVP 296
>gi|358465325|ref|ZP_09175275.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
sp. oral taxon 058 str. F0407]
gi|357065820|gb|EHI75995.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
sp. oral taxon 058 str. F0407]
Length = 326
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQHGYQVRAFGRNRKVGQSLENSLVVFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P ++ E D + + + YI ++ F
Sbjct: 103 AGMQRLVYVSSPSIYAAPRNQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIVLRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGQVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|228930454|ref|ZP_04093454.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229124950|ref|ZP_04254125.1| NAD-dependent epimerase/dehydratase [Bacillus cereus 95/8201]
gi|228658514|gb|EEL14179.1| NAD-dependent epimerase/dehydratase [Bacillus cereus 95/8201]
gi|228829173|gb|EEM74810.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 293
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 5 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 54
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V + K +++ SS +Y
Sbjct: 55 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEVLKGK-TNKYIMTSSMAVY 106
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 107 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 163
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 164 ENDYTKRLQFYVEHIVRKEPVAV 186
>gi|13540890|ref|NP_110578.1| UDP-glucose 4-epimerase [Thermoplasma volcanium GSS1]
gi|14324272|dbj|BAB59200.1| NDP-sugar epimerase [Thermoplasma volcanium GSS1]
Length = 312
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 47/279 (16%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR--FNEIV 130
E K++LI +GG IG + + LL +EVT++ D+ K ++ F I
Sbjct: 2 ENKRILI----TGGAGFIGSNMVEHLLPK-NEVTVIDNLSITDDRYIKKFYDNPNFKFI- 55
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLD-------NNGK---------NLDAVRPVADWA 174
++ N + G +D+V+ NG N++ V +
Sbjct: 56 ----------KKDILNGIDGYHYDIVVHLAADSDVRNGSSNPALDMKVNVEGTISVLEMM 105
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISENFS----NW 225
+ S +K LF SS+ +Y A P E + A + E +IS S N
Sbjct: 106 RKSDIKDILFASSSTVYGEAKVIPTPENYGPLLPISSYGASKLAAEAFISAYASYYGFNA 165
Query: 226 ASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
FR ++G + F +++ K+ + + G G Q + HV DL + E+
Sbjct: 166 LLFRFANVVGKNSTHGVIFDFINKLKNNKKELEVLGDGTQAKSYIHVEDLIGSMIYVYEH 225
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVH 322
+ FNL +D ++D +AK +A GL IVH
Sbjct: 226 VKGVEP--FNLGNDDVTSVDKIAKFVLEAMGLKDTAIVH 262
>gi|427419645|ref|ZP_18909828.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762358|gb|EKV03211.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 347
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQ 231
++F+ +S+ G++ DEPP E +KP G + + + ++ RP
Sbjct: 118 RRFVHVSTIGVHGHVDEPPGDENCPLKPGDIYQETKLEGEIWIRDFGQQSGLPVTVVRPA 177
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G + + + ++V + VP G+G + HV DL++ A +P+A
Sbjct: 178 GIYGPGEKRLLKIY---KMVMQGWVPAIGNGGNLLHFVHVDDLTNFFIHAATHPQAMGE- 233
Query: 292 IFNLVSDRAVTLDGMAKLCA 311
+F S +A+T M L
Sbjct: 234 VFICGSQQAITFRDMVGLIG 253
>gi|423592877|ref|ZP_17568908.1| hypothetical protein IIG_01745 [Bacillus cereus VD048]
gi|401229542|gb|EJR36057.1| hypothetical protein IIG_01745 [Bacillus cereus VD048]
Length = 328
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDDRVNL 236
>gi|374295639|ref|YP_005045830.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
gi|359825133|gb|AEV67906.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
Length = 347
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 33/263 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G L + LL G EVT + + + + + +K + + GD +
Sbjct: 8 TGGAGFLGINLIRFLLNKGCEVTSLDIAEFDYEDVKDKV------------RIITGDIRD 55
Query: 144 VGNVVGGV-TFDVVL------------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
V + D+V+ D ++D R V D A + GV++ + ISS +
Sbjct: 56 RKIVDQAMEQVDIVVHAAAALPLYKKEDIFSTDVDGTRNVVDSAFTHGVERVIHISSTAV 115
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-------FRPQYMIGSGNNKDCE 243
Y D P +E D + + Q + E + + RP+ IG
Sbjct: 116 YGIPDHHPLMEDDKLDGVGPYGQAKIKAEEVCLEYRNKGMCIPIIRPKSFIGP-ERLGVF 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+D + P+ GSG + V DL + LA E P+ ++ FN+ + T+
Sbjct: 175 ALLYDWAKDGKNFPMIGSGNNRYQLLDVEDLCEAIYLAAEGPKDKVNDTFNIGAKEFTTM 234
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK 326
+ AG +I+ + K
Sbjct: 235 KEDYQAVLDYAGFGKKIIGFPAK 257
>gi|209549958|ref|YP_002281875.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535714|gb|ACI55649.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 326
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH+V++ G N+ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAEGHQVSVYNRGLRNAGLPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D A+ GN +DVV D V R + ++ S G Q++FISSA +Y
Sbjct: 55 GAYADLAK-GN------YDVVCQFIAFTPDQVARDIEVFSGSCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGSG-----NN 239
++PP E + P + Q + E A+ RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPHWPYSQAKIACEELLKQSANLACTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P+ + G G + D + + + +AA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPIIVAGDGHTPWTLTRSIDFAVPF-VGLFGKQAALNKIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ G
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHVPTDTLIRYNPEWVG 256
>gi|322389546|ref|ZP_08063096.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 903]
gi|321143740|gb|EFX39168.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 903]
Length = 325
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 38/248 (15%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + + F + +V AG T WG NVVG
Sbjct: 50 GDLSSIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQ---VEKYISEN-F 222
+ V + + VK+ +++SS IY D+ +E D P H+ K SE F
Sbjct: 93 KNVLELCREYAVKRLVYVSSPSIYAAGKDQLNIMESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGAAYS 264
Query: 338 FRNMVFIF 345
+ +F
Sbjct: 265 LEGVYRLF 272
>gi|229097565|ref|ZP_04228524.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-29]
gi|423442188|ref|ZP_17419094.1| hypothetical protein IEA_02518 [Bacillus cereus BAG4X2-1]
gi|423465255|ref|ZP_17442023.1| hypothetical protein IEK_02442 [Bacillus cereus BAG6O-1]
gi|423534601|ref|ZP_17511019.1| hypothetical protein IGI_02433 [Bacillus cereus HuB2-9]
gi|423540123|ref|ZP_17516514.1| hypothetical protein IGK_02215 [Bacillus cereus HuB4-10]
gi|228685835|gb|EEL39754.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-29]
gi|401173658|gb|EJQ80870.1| hypothetical protein IGK_02215 [Bacillus cereus HuB4-10]
gi|402415593|gb|EJV47916.1| hypothetical protein IEA_02518 [Bacillus cereus BAG4X2-1]
gi|402418424|gb|EJV50720.1| hypothetical protein IEK_02442 [Bacillus cereus BAG6O-1]
gi|402462809|gb|EJV94513.1| hypothetical protein IGI_02433 [Bacillus cereus HuB2-9]
Length = 341
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 106/272 (38%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD + + +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 193 --------------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN--W----ASFRPQY 232
+D VE + P H K + E + W R
Sbjct: 103 LHHIKEDYILQPEPTSDRIKAVENGEISP-YEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S VEN +A + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMVENNKAGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|19553125|ref|NP_601127.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|62390761|ref|YP_226163.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|21903430|sp|Q45291.2|GALE_CORGL RecName: Full=UDP-glucose 4-epimerase; AltName:
Full=Galactowaldenase; AltName: Full=UDP-galactose
4-epimerase
gi|21324691|dbj|BAB99314.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|41326099|emb|CAF20262.1| UDP-GLUCOSE 4-EPIMERASE [Corynebacterium glutamicum ATCC 13032]
gi|385144027|emb|CCH25066.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum K051]
Length = 329
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 105/282 (37%), Gaps = 65/282 (23%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLSEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKRPV------PIPGSGMQFTNIAHVRDLSS 276
+ G+ G N++ E ++ R++ P P G + H+ DL+
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAK 227
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
LA+E+ EA IFNL S ++ + ++C + G P+
Sbjct: 228 AHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPI 269
>gi|331267149|ref|YP_004326779.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus oralis
Uo5]
gi|326683821|emb|CBZ01439.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Streptococcus
oralis Uo5]
Length = 326
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD------ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKAGQSLENSLVSFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + IV AG TVWG +D N+ + V D +
Sbjct: 58 DLARACQGMDMIVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGIFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|218906628|ref|YP_002454462.1| hypothetical protein BCAH820_5542 [Bacillus cereus AH820]
gi|218536676|gb|ACK89074.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 292
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V + K +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEVLKGK-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 162
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 163 ENDYTKRLQFYVEHIVRKEPVAV 185
>gi|423407329|ref|ZP_17384478.1| hypothetical protein ICY_02014 [Bacillus cereus BAG2X1-3]
gi|401659305|gb|EJS76791.1| hypothetical protein ICY_02014 [Bacillus cereus BAG2X1-3]
Length = 340
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P + S G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKEIFPEVEQ-----SIGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + N +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 50 N--GDVLSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ RI + V +PG + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRIAKGGKVLVPGRKDRPVQFVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNYEMTMEELLNTCKKVTNSDAEFVWID 251
>gi|218516332|ref|ZP_03513172.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli 8C-3]
gi|417099845|ref|ZP_11959918.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
gi|327192481|gb|EGE59435.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
Length = 367
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLP 317
+A L A A G+P
Sbjct: 285 VATLLADAMGVP 296
>gi|398977355|ref|ZP_10687072.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM25]
gi|398138099|gb|EJM27129.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM25]
Length = 309
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I + D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRI--IDDLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMREAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLAGEQYFDF--YRRQHGLEPAIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFMYVEDLVDVLVQAIEKPQVDVGAV-N 241
Query: 295 LVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ ++A L M A L A LP V Y P +G
Sbjct: 242 VGWNQATNLKQMLAALEAVVGELPP--VSYGPARSG 275
>gi|423296111|ref|ZP_17274196.1| hypothetical protein HMPREF1070_02861 [Bacteroides ovatus
CL03T12C18]
gi|392670721|gb|EIY64199.1| hypothetical protein HMPREF1070_02861 [Bacteroides ovatus
CL03T12C18]
Length = 291
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VLI +G ++ +G + K LL + E + TV D ++ KK F +++ + G
Sbjct: 2 KRVLI----TGANSFVGVNVEKWLLQTPDEFIVETV-DTMNEAWKKADFAKYDVVFHVAG 56
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
++ + V D+ ++ +A WAK GVKQF+F+SS +Y +
Sbjct: 57 IAHVDPKPKMAPLYYKVNRDLTIE-----------IAKWAKKHGVKQFIFMSSKIVYHAS 105
Query: 195 DEPPHVEGDVV 205
++GDV+
Sbjct: 106 KS---LKGDVI 113
>gi|255325137|ref|ZP_05366243.1| UDP-glucose 4-epimerase [Corynebacterium tuberculostearicum SK141]
gi|255297702|gb|EET77013.1| UDP-glucose 4-epimerase [Corynebacterium tuberculostearicum SK141]
Length = 328
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 70/295 (23%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A L+ GH+VTI+ D NR E V + + GD A+
Sbjct: 6 TGGAGYVGSVCAAVLVEQGHDVTII-------DNFSTG--NR--EAVPEAARVIEGDVAD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
V+G F+ V+ ++L +PV W + + VK +F S
Sbjct: 55 KAAEVLGEGGFEGVIHFAARSLVGESVEKPVEYWQHNVVTTLTLLNAMRDNDVKNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWASFRPQYMIGS------ 236
+A Y D+ P E +P A + ++ I+ SF Y +G+
Sbjct: 115 TAATYGEPDQVPITEDMPTQPTNPYGATKLAIDYMIT-------SFAHAYGLGATSLRYF 167
Query: 237 ---------GNNKDCEEWFF-----------DRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
G N++ E D+I G + H+RDL+
Sbjct: 168 NVAGAYGNIGENREVETHLIPIVLQVALGHRDKIFMFGDDWDTADGTPVRDYIHIRDLAD 227
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAG 329
LA+E+ E+ + I+NL S ++ + ++C + G +P E+ P+ AG
Sbjct: 228 AHVLALESNESGAHRIYNLGSGDGYSVKQVIEMCRKVTGHDIPAEVA---PRRAG 279
>gi|406965297|gb|EKD90935.1| hypothetical protein ACD_30C00056G0012 [uncultured bacterium]
Length = 340
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 44/251 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG------------------DENSDK 117
KVLI +G IG +A+ + +GH++T + G +++ +
Sbjct: 2 KVLI----TGIDGYIGTQMAQVFISAGHDITGIDTGFYREGWLYNGVKFSPKVITKDTRQ 57
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ F+ ++S + DP +GN T+++ N A+ +A AK +
Sbjct: 58 ITLEDLKGFDAVISLADLS--NDP--LGNQDPKNTYEI-------NHKAIIRLAKLAKKA 106
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--SFRPQYMIG 235
GVK+F++ SS IY A + E V P + + + + ++ A +F P YM
Sbjct: 107 GVKRFIYSSSCSIYGVAKDGLVDENSEVLPQTTYAKCKLLVEQDLKKLADNNFSPTYMRN 166
Query: 236 SGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ FD +V ++ + + G + + H+ D+ +E PE
Sbjct: 167 ATVFGASPRMRFDLVVNNLSGIAWTQKEIRLSSDGTPWRPLVHILDVCEAFLTVLEAPEK 226
Query: 288 ASSN-IFNLVS 297
N IFN+ S
Sbjct: 227 LVHNQIFNVGS 237
>gi|293370188|ref|ZP_06616748.1| NAD-binding protein [Bacteroides ovatus SD CMC 3f]
gi|292634685|gb|EFF53214.1| NAD-binding protein [Bacteroides ovatus SD CMC 3f]
Length = 291
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VLI +G ++ +G + K LL + E + TV D ++ KK F +++ + G
Sbjct: 2 KRVLI----TGANSFVGVNVEKWLLQTPDEFIVETV-DTMNEAWKKADFAKYDVVFHVAG 56
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
++ + V D+ ++ +A WAK GVKQF+F+SS +Y +
Sbjct: 57 IAHVDPKPKMAPLYYKVNRDLTIE-----------IAKWAKKHGVKQFIFMSSKIVYHAS 105
Query: 195 DEPPHVEGDVV 205
++GDV+
Sbjct: 106 KS---LKGDVI 113
>gi|340757124|ref|ZP_08693727.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
gi|251834392|gb|EES62955.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
Length = 347
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAG---HVQVE 215
N+ + + K G+K+F+ SS+ +Y + P E D+V P A +V
Sbjct: 129 NVRGTMNILEICKKLGIKKFIQASSSSVYGNNKKAPFRETDIVDFAISPYAATKKSCEVI 188
Query: 216 KYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR 272
++ N F+ ++ G + D + F + I+ + +P G G F + +V+
Sbjct: 189 GHVYHKLYNIDMFQLRFFTVYGERQRPDLAIYKFTKMILEGKEIPFYGDGNTFRDYTYVK 248
Query: 273 DLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
D+ +T +++ + S I NL V+L M ++ G+ V+I
Sbjct: 249 DIVQGITKSIDYLKNNSDVYEILNLGESHVVSLKEMVEVIENTLGIKVKI 298
>gi|229167882|ref|ZP_04295613.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
AH621]
gi|228615522|gb|EEK72616.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
AH621]
Length = 326
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 86 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDDRVNL 234
>gi|225021246|ref|ZP_03710438.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii
ATCC 33806]
gi|224945979|gb|EEG27188.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii
ATCC 33806]
Length = 342
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 51/289 (17%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
K K ++ +GG +G A LL GH++TI+ D NR + V A
Sbjct: 8 RKAKTIMKLLVTGGAGYVGSVCATVLLEQGHDITIV-------DNFSTG--NR--DAVPA 56
Query: 133 GGKTVWGDPAEV-GNVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AK 175
+ GD +V G+V+ G FD V+ ++L RP W +
Sbjct: 57 NATLIEGDIRDVAGDVLAGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMR 116
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------S 227
+ GV +F S+A Y D P E P + + I +++A S
Sbjct: 117 AHGVTNLVFSSTAATYGEPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGATS 176
Query: 228 FRPQYMIGS----GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVR 272
R + G+ G N++ E +++ + + I G G + H++
Sbjct: 177 LRYFNVAGAYGSVGENREVETHLIPLVLQVALGHRDEIFIFGDDYPTKDGTCIRDYIHIK 236
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
DL+ LA+E+ + IFNL S ++ + C + G P+ +
Sbjct: 237 DLADAHVLALESNTPGTHRIFNLGSGDGYSVKEVIDKCREVTGHPIPVT 285
>gi|417103981|ref|ZP_11961245.1| putative mRNA-binding protein [Rhizobium etli CNPAF512]
gi|327191079|gb|EGE58131.1| putative mRNA-binding protein [Rhizobium etli CNPAF512]
Length = 326
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 35/264 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPAE 143
GG I + + + +GH V++ G +K P + IV G + + A+
Sbjct: 9 GGTGQISYPCVERAVAAGHHVSVFNRG------LKSAPLPAGVSSIVGELGSGAYAELAK 62
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVE 201
V +DVV D + R + ++ G Q++FISSA +Y KP+ E
Sbjct: 63 V-------NYDVVCQFIAFTPDQIARDIEVFSGKCG--QYIFISSASVYEKPSRHYVITE 113
Query: 202 GD-VVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG--NNKDCEEWFFDRIVRK 253
+ P + Q + E W RP + + +G E R++
Sbjct: 114 ETPAINPYWPYSQAKIACEELLKKSGNLAWTIVRPSHTVRTGLPMMMGDSEIMARRLLDG 173
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
P+ + G G + D + + + +AA + IF++ SDRA D + K A+
Sbjct: 174 EPIIVAGDGHTPWTLTRSADFAVPF-VGLFGKQAAVNEIFHITSDRAHIWDDIQKTIARL 232
Query: 314 AGLPVEIVH--------YDPKAAG 329
G+ +IVH Y+P+ G
Sbjct: 233 LGVEAKIVHVPTDTLIKYNPEWVG 256
>gi|229197220|ref|ZP_04323952.1| NAD-dependent epimerase/dehydratase [Bacillus cereus m1293]
gi|228586252|gb|EEK44338.1| NAD-dependent epimerase/dehydratase [Bacillus cereus m1293]
Length = 359
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 59/279 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 64
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R V + + ++ ++FISS
Sbjct: 65 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNVGE-VLTDNIEHYIFISSLS 115
Query: 190 IYKPADEPPHVEGD-VVKPDAGHVQVE----------------KYISENFSN--W----A 226
+YK P H++ D +++P+ Q++ K + E + W
Sbjct: 116 VYKDWI-PHHIKEDYILQPEPTEEQIKAVENGEVSPYEYYGALKVLCEKEAEEYWPRRVL 174
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 175 HVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKN 234
Query: 287 AASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
A IFN+ + +T++ + C + E V D
Sbjct: 235 AG---IFNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 270
>gi|448310886|ref|ZP_21500665.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445607234|gb|ELY61127.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 316
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKY- 217
NL+A + + A+ + + SSA IY + P EG +P + + + +++Y
Sbjct: 104 NLEATLSLLECARREDAR-VVLASSAAIYGQPEYTPIDEGHPTEPSSPYGLEKLTIDRYA 162
Query: 218 -ISENFSNWASFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAH 270
+ + +Y G + ++ F ++ P+ + G G Q + H
Sbjct: 163 RLYHELYGLETVALRYFNVYGPRQAGGDYSGVISIFLEQARNGEPITVNGDGTQTRDFVH 222
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+ D+ LA + ++ FN+ + VT+ +A+ G EIVH DP+ I
Sbjct: 223 ISDVVQANLLAAQTESVGAA--FNVGTGETVTIRELAETIRSVVGSDSEIVHRDPRPGDI 280
Query: 331 DAKKA 335
+ +A
Sbjct: 281 EQSQA 285
>gi|409730170|ref|ZP_11271760.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722601|ref|ZP_21705134.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789026|gb|EMA39719.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 325
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 36/274 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +EL ++VT+ G+ + PF + G +T DP +
Sbjct: 7 GGTRFIGRHTVEELRSHDYDVTVFNRGNHEN------PFETVEHVT--GDRT---DPEAL 55
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + DVV+D + D VR D + ++ ISS Y D P E +
Sbjct: 56 EDAAQRIDPDVVVDCVAYHPDEVRHAVD--AFADANAYVVISSGAAYG-IDAIPKREDET 112
Query: 205 VKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEWF 246
+ Q E + N S RP + G + + ++
Sbjct: 113 RLHECTDEQATDDSWETYGPRKAAIDRVVAAAGEAGVNAMSVRPPVVYGPHDYTERFGYW 172
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ V +PG G ++ V D++S L E+ ++ S +N+ R L+
Sbjct: 173 VDRVANHDRVVVPGDGDGLRHMVFVEDVASALVRVAEHGDSGES--YNVGDRRLPILEEW 230
Query: 307 AKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 338
L A A VE+V + + AA A + FP
Sbjct: 231 VGLVADALDTEVEVVTANARELAAADLAPEDFPL 264
>gi|190894633|ref|YP_001984926.1| putative UDP-glucose 4-epimerase [Rhizobium etli CIAT 652]
gi|190700294|gb|ACE94376.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652]
Length = 367
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLP 317
+A L A A G+P
Sbjct: 285 VATLLADAMGVP 296
>gi|434394389|ref|YP_007129336.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
gi|428266230|gb|AFZ32176.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
Length = 336
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 36/271 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-----IMTVGDENSDKMKKPPFNRFNEI 129
+KVL+ +G IG +L +L+ +GH+V M + + + P F
Sbjct: 5 RKVLV----TGVAGFIGSHLLDKLIAAGHQVVGIDNLCMGKLENIAHHLDNPAFKFLQRD 60
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDV-----VLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
++ + + + + +V F + +D N V ++A+S K L
Sbjct: 61 ITEA--STFANLEDFDCLVHLAAFKIPRYGKAIDTLKINYQGTENVLEFARSRNCKCVL- 117
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-ISENFSNWASFRPQ----------YM 233
S++ +Y + P E D + V Y +S+ F +F Q
Sbjct: 118 ASTSDVYGRNPKLPFNEDDDSVLGSSKVARWSYAVSKLFDEHLAFAYQESYGFPVVILRF 177
Query: 234 IGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
GS + W F ++I+ R + I G G+Q + ++ D + + A+ PE
Sbjct: 178 FGSYGPRHHLSWWGGPQSVFIEQILSDREIQIHGDGLQTRSFTYISDTVAGIYAAIIKPE 237
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
A+ IFN+ SDR +++ +AK + + P
Sbjct: 238 -ANGEIFNIGSDREISILNLAKTIKRLSDTP 267
>gi|398783802|ref|ZP_10547172.1| putative reductase [Streptomyces auratus AGR0001]
gi|396995709|gb|EJJ06719.1| putative reductase [Streptomyces auratus AGR0001]
Length = 342
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 39/272 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + L G +VT+ F+R N G + GD A+
Sbjct: 22 GGTEFVGRAVTEAALARGWQVTV---------------FHRGNHAPPEGVAALHGDRADA 66
Query: 145 GNVVG--GVTFDVVLDNNGKNLDAVRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHV 200
+ +D V+D AVR A A+ +G ++ ++SS +Y PA
Sbjct: 67 AGLAALEQGAWDAVVDTWSGAPAAVRDAARLLAERAG--RYAYVSSRSVYAYPAPYGLDE 124
Query: 201 EGDVVKPDAGHVQVEKYIS----------ENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
+G +V A E Y + E F + A R ++G N W+ R
Sbjct: 125 DGPLVDGSADATTAEDYAAAKRGGELAAAEAFGDRALLVRAGLILGPYENIGRLPWWLGR 184
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
I R PV PG VRDL+ A+E+ +NL+S+ T+ + +
Sbjct: 185 IARGGPVLAPGPREAALQYIDVRDLAEWTLGALES---GLGGAYNLLSEPGHATMGELLE 241
Query: 309 LCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
C Q G E+ P+ AAGI+ P
Sbjct: 242 SCVQVTGADAELRWTAPEDVLAAGIEPWTELP 273
>gi|88607789|ref|YP_505813.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
gi|88598852|gb|ABD44322.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
Length = 313
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 52/261 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVL+ GG IG YL EL+ + VT+ T E + ++K F R ++ G
Sbjct: 2 KKVLVF----GGSGFIGRYLVCELVARKYSVTVYTRNHEKAARLK--LFGRLGQVDIVCG 55
Query: 135 K--------TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP-----VADWAKSSGVKQ 181
K + D + N+VG ++ D G L + +A A G K
Sbjct: 56 KLSDAALIQKLIADCDVIVNLVGTIS-----DPRGAVLQYLHVTFPSNIAKLATKHG-KM 109
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSNWASFRPQYMIGSGN 238
F+ S+ G D+ K + ++ EK I + + RP + G G+
Sbjct: 110 FVHFSAMG------------ADIAKTSSYAQSKLEGEKRIRDVCEDAVILRPNLVFGDGD 157
Query: 239 NKDCEEWFFDR---IVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
N FF++ + R P +P+ G G HV D+ ++ + N ASS +
Sbjct: 158 N------FFNKFANLARVAPFMPLFGGGKNLLQPVHVDDVVNVAMDLIVN--QASSGTYE 209
Query: 295 LVSDRAVTLDGMAKLCAQAAG 315
+ +L + K A G
Sbjct: 210 VAGPTVYSLKDLIKFVLVATG 230
>gi|347532736|ref|YP_004839499.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
gi|345502884|gb|AEN97567.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
Length = 307
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVAD--------WAKSSGVKQF------ 182
+ AE+ + GV DV+L G N+ A V P+AD + +K F
Sbjct: 56 ESAEMAAIFTGVQPDVILHCAGSANVGASVVNPMADLDGNLHSLYQLLLALKSFEKRPEI 115
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-------- 234
+F+SSAG+Y + P E DV P + + + K++ E + + Y I
Sbjct: 116 IFLSSAGVYGNPRQLPVRESDVAAPMSPY-GLHKHMGEELCEYYNRIHGYHIRSIRIFSA 174
Query: 235 -GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM--LTLAVENPEAASSN 291
G+G K + + + + G+G + + HV D+ L L+ + PEA
Sbjct: 175 YGNGLRKQLLWDIYQKYQNTGRIELFGTGEETRDFIHVSDIMRAIDLILSYDGPEA---- 230
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ N+ + V++ +A++ A+ G P IV ++
Sbjct: 231 VINVANGEEVSIRELAEIYAEKLGAPQNIVSFN 263
>gi|254415758|ref|ZP_05029516.1| NAD dependent epimerase/dehydratase family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177464|gb|EDX72470.1| NAD dependent epimerase/dehydratase family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 325
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 227
+GVK F+FISS G + P E +PD + +Q E+ + S++ W
Sbjct: 108 QAGVKHFMFISSIGAMATLSDHPLTETSPCQPDTPYGRSKLQAEQALIELASQSSMTWTI 167
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP + GSGN + E I R P+P G ++ +V +L + + +P A
Sbjct: 168 LRPTLVYGSGNPGNMER-LIKLINRGLPLPF-GLVNNRRSLLYVGNLVDAIATCLTHPNA 225
Query: 288 ASSNIFNLVSD 298
+ LVSD
Sbjct: 226 KNQTF--LVSD 234
>gi|425455837|ref|ZP_18835548.1| Similar to tr|Q60B69|Q60B69 [Microcystis aeruginosa PCC 9807]
gi|389803206|emb|CCI17851.1| Similar to tr|Q60B69|Q60B69 [Microcystis aeruginosa PCC 9807]
Length = 326
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + DR+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRAN-----MDRLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AS+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPN-ASNQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|422593457|ref|ZP_16667749.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330983766|gb|EGH81869.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 323
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDV-VKPD--------A 209
N N+ A R + + A GVKQF+ IS+ +Y + D E +V PD A
Sbjct: 80 NENNVLATRRLLEQAAQDGVKQFVHISTPSLYFRFKDARDITESEVGASPDLSKSRGLFA 139
Query: 210 GHVQVEKYISE----NFSNWAS---FRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIP 259
H KY++E F + RP+ + G + F R++ R + +P+P
Sbjct: 140 NHYAYSKYLAELEVLKFQDRMHVTILRPRGIFGKHDTT-----IFPRVIAMGRGKGIPLP 194
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G ++ HV +++ + LA++ E + +N+ + L + G P++
Sbjct: 195 LKGEAVLDVTHVDNVTHAIRLALKG-EHRNGQAYNITNGEPQNLMETLDKLSYGLGEPLK 253
Query: 320 IVHYDPK 326
+ +PK
Sbjct: 254 MRKVNPK 260
>gi|440755391|ref|ZP_20934593.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
gi|440175597|gb|ELP54966.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
Length = 326
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|395645323|ref|ZP_10433183.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
gi|395442063|gb|EJG06820.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
Length = 311
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 16/187 (8%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKPDAGHVQ 213
L + NL V A+ GV++ + SSA +Y E P E D++ P A
Sbjct: 85 LATHAVNLTGTLNVLIAARDCGVRKVVMASSAAVYGENPELPKREEMAPDLLSPYAAQKL 144
Query: 214 VEKYISENFSNWASFRP---QYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGM 263
+++ + FS +Y G +D F RI+ P+ I G G
Sbjct: 145 SDEHYAAVFSRLYGLSTVCLRYFNVFGPRQDPSSPYSGVISIFASRILNGDPIAIHGDGG 204
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
Q + +VRD+ A+ + + +FN+ L+ +A+ QAAG V I +
Sbjct: 205 QTRDFVYVRDVVQANLRAMASD---AEGVFNIARGEQTDLNTLARSMMQAAGQEVAIRYG 261
Query: 324 DPKAAGI 330
P+ I
Sbjct: 262 PPRGGDI 268
>gi|229136265|ref|ZP_04265013.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST196]
gi|228647203|gb|EEL03290.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST196]
Length = 314
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 50 FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
F + R S+ F VK + KKVL++ GG G +L + LL +GH+VTI T
Sbjct: 2 FFYFSVYNNRGSILQF-VKTGMMKMKKVLVL----GGTRFFGKHLVEVLLQAGHDVTIAT 56
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
G + + PF SA + + D + G ++D+V DN + +A
Sbjct: 57 RG------VTEDPFG------SAVKRLIVDREDERLLEERFEGKSYDIVYDNLCYSSNAA 104
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + K K+++ SS +Y+PA
Sbjct: 105 KIICEVLKGK-TKKYIMTSSMAVYEPA 130
>gi|159898723|ref|YP_001544970.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159891762|gb|ABX04842.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 286
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 40/216 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAG--GKTVWG 139
+G IG ++A+EL +GH++T + +KP P N + V+A T W
Sbjct: 6 TGASGFIGRHVAEELHQAGHQLTCLV--------RQKPTTPINSATQYVAAEWLKPTTWL 57
Query: 140 DP-AEVGNVVGGVTFDVVLDNNGKNLDAVR---PVADW--AKSSGVKQFLFISSAGIYKP 193
D AE V+ V ++ ++ + AV P+A + A G+++ + IS+ G
Sbjct: 58 DQLAEHDMVINCV--GMLRESRQASFQAVHTSVPIALFKAAAQYGLQKIIQISALG---- 111
Query: 194 ADEPPHVEGDVVKPDA---GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW-FFDR 249
DV P A ++ +S+ W RP ++ G+G C F R
Sbjct: 112 --------ADVAAPQAFVRSKALADQALSQQSVPWVVLRPSFVYGAG----CYSMELFRR 159
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ R PI G G + DL + AVE+P
Sbjct: 160 LARLPITPILGDGSYQVQPIQIGDLVRAIRQAVEDP 195
>gi|383765488|ref|YP_005444469.1| NAD-dependent epimerase/dehydratase family protein [Phycisphaera
mikurensis NBRC 102666]
gi|381385756|dbj|BAM02572.1| NAD-dependent epimerase/dehydratase family protein [Phycisphaera
mikurensis NBRC 102666]
Length = 361
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYK-----PADE-PPHVEGDVVKPD--AGHVQV 214
N +AV V D A GV++ + S+ G++ P+DE P GDV + AG +V
Sbjct: 98 NDEAVGHVLDAAARRGVRRVVHCSTVGVHGHVSELPSDETAPFNPGDVYQRSKLAGETRV 157
Query: 215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
+ + RP + G G+ + + + R ++K P+ GSG + ++ DL
Sbjct: 158 REAMGNRPFEAVVCRPAGIYGPGDLRFLKVF---RGLQKGRFPMFGSGEVTYHFTYIDDL 214
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
L LA ++PEAA + L D L+ L A A G
Sbjct: 215 VGGLLLAGDHPEAAGQTLI-LGGDGFYPLNRFVGLVAAAVG 254
>gi|315612318|ref|ZP_07887231.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
gi|315315299|gb|EFU63338.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
Length = 326
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------MTVGDENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V M ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKMGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG D N+ + V D +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWGAWE---------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E+
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALES 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
P+ AS ++N+ + + + + G P+
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPI 249
>gi|395330720|gb|EJF63103.1| NAD-dependent epimerase/dehydratase [Dichomitus squalens LYAD-421
SS1]
Length = 1011
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 69/303 (22%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF--NRFNEIV 130
+K K++++ +GGH IG ++A++L+ G++V + +D + +PPF E+V
Sbjct: 3 DKSKLILI---TGGHGFIGGHVARKLVSLGYDVRV-------TDLVGRPPFAATLVKEVV 52
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADW--------------- 173
DP+ VV GV DVVL + + D+
Sbjct: 53 LGN----LCDPSFCCRVVQGV--DVVLHFAATMGGMGTIHAANDFIIYQENHTMTTNLLS 106
Query: 174 -AKSSGVKQFLFISSAGIYKPADEPPHV-----EGDVVKPDAGHVQ----VEKYISENFS 223
K++GV+ F + SSA +Y + + V EGDV K H Q +EK +SE
Sbjct: 107 ACKAAGVRGFFYASSACVYPESLQGSGVDVSLAEGDVWKHPPPHPQGLYGLEKLVSELGL 166
Query: 224 NWASFRPQYMIGSGNN--KDCEEWFFDR------IVRKR-----------PVPIPGSGMQ 264
+ + Q + +N W+ R +RK I G G Q
Sbjct: 167 HQHASTLQVRVARFHNIYGPMGSWYGGREKVPAAFLRKALAAKLSQDPEVHFEIWGDGSQ 226
Query: 265 FTNIAHVRD-LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
+ + D + ++L L E+ S N+ SD+AV++ +A + +AA + E V +
Sbjct: 227 RRSFCFIDDAVEAILRLL----ESDCSEPVNIGSDQAVSVRQLADIALRAASIDPESVKF 282
Query: 324 DPK 326
D K
Sbjct: 283 DHK 285
>gi|220929236|ref|YP_002506145.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum
H10]
gi|219999564|gb|ACL76165.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum
H10]
Length = 349
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 50/293 (17%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKKVLI +G + V+G L K L +G E + + D N + + F + +
Sbjct: 2 KKKVLI----TGNNGVLGRNLVKYLHNNGRENYELVLFDINQNNSEFSSFRTYKGDIRKK 57
Query: 134 G--KTVWGDPAEVGNVVGG-------VTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFL 183
+ V GD V + G +D++++ L+ A ++G ++F+
Sbjct: 58 EDVERVIGDIDIVVHCAGASPSYEESQIYDIIINGTANLLEC-------AFTTGKAERFV 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWAS-------FRPQY 232
+ISS +Y ++ P E D VKP + ++ E+ +W + RP+
Sbjct: 111 YISSTSVYGVPEKAPIYETDEVKPYDPYNRSKIETERLC----DHWRTKGHCVSVLRPRS 166
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+G +D R P+ G G + V DL + LA+ ++++
Sbjct: 167 FLGP-ERLGTFGILYDWASEGRNFPMLGPGKNKYQLLDVEDLCQAIYLAMSVDANNANDL 225
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIF 345
FN+ + T+ + AAG +I K FP + M FI
Sbjct: 226 FNIGAKDFSTIKDDYQAVLDAAGFNKKI-------------KCFPAKPMFFIL 265
>gi|429209546|ref|ZP_19200776.1| UDP-glucose 4-epimerase [Rhodobacter sp. AKP1]
gi|428187428|gb|EKX56010.1| UDP-glucose 4-epimerase [Rhodobacter sp. AKP1]
Length = 368
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+RP I G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+
Sbjct: 235 ERPT-IFEDGEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGSAYTIAGVARLLAE 292
Query: 313 AAGLP 317
A G P
Sbjct: 293 AMGRP 297
>gi|425459754|ref|ZP_18839240.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9808]
gi|389827723|emb|CCI20857.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9808]
Length = 326
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 IIRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAIKNCRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|389741537|gb|EIM82725.1| glycosyltransferase family 2 protein [Stereum hirsutum FP-91666
SS1]
Length = 1026
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 62/307 (20%)
Query: 64 AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF 123
A +++A K++ +V +GGH IG ++A++L G V I+ + +S +P
Sbjct: 2 AIVSQSTADSAKQIYVV---TGGHGFIGSHVARDLYDQGQHVRIIDINPRSSFDTAEP-- 56
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVT----FDVVLDNNG------------KNLDAV 167
I + DPA V G T F V+ G +N
Sbjct: 57 -----ICTEAFIGNLCDPAFCTQAVRGATVVLHFAAVMGGMGAIHGDNDSIIFEENSTMT 111
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPAD--EPPHVEGDVVKPDA---------GHVQVEK 216
R + + ++GV +F + SSA +Y P D P V+ + + DA G +EK
Sbjct: 112 RNILLASIATGVGKFFYASSACVY-PEDLQADPLVDVSLKESDAWSQIPPRPQGLYGLEK 170
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCEE--WFFDR------IVRKR-------PVP---- 257
+SE + + + I +N W R +RK P P
Sbjct: 171 LLSEALIQQYTSQIEVRIARFHNIYGRRGAWSNGREKVPAAFIRKALAAKLLLPSPPTME 230
Query: 258 IPGSGMQFTNIAHVRD-LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
I G G Q + + D + ++L+L ++ S N+ S+ +V++ G+A+L Q AGL
Sbjct: 231 IWGDGTQRRSFLFIDDCVQAILSLL----DSTCSKPMNIGSEDSVSMTGLAELAIQIAGL 286
Query: 317 PVEIVHY 323
V+ V +
Sbjct: 287 QVQDVDF 293
>gi|440714716|ref|ZP_20895292.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SWK14]
gi|436440409|gb|ELP33736.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SWK14]
Length = 326
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
+++D +R V +K++GV + + SS+ +Y +P + P H + + + ++
Sbjct: 105 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 164
Query: 221 NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHV 271
F ++ F Q+ + N + D +V K +P+ G GMQ V
Sbjct: 165 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 224
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D T +++P A I N+ SD +T+ +A+ + G +++H P G D
Sbjct: 225 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVLHLPPLPEG-D 282
Query: 332 AKKAFP 337
+ P
Sbjct: 283 MTRRCP 288
>gi|322391247|ref|ZP_08064718.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
gi|321145851|gb|EFX41241.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
Length = 327
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 54/274 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL+ G++V VG ENS D K
Sbjct: 3 KKVLV----TGATGFLGKYVVEELVEHGYQVRAFGRNSKVGRSLENSSVSFFQGDLTKAE 58
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V + +
Sbjct: 59 DLLEACQEMDMVVHAGALSTVWG-PWE--------------DFYQANVLGTKYVLEACRQ 103
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVE-KYISEN-FSNWAS-----F 228
+G+++ +++SS IY P D+ E D + + + + K SE F ++A
Sbjct: 104 TGIQRLVYVSSPSIYAAPRDQLGIKESDAPEENNLNNYIRSKLASEKLFKDYADVPSIIL 163
Query: 229 RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 164 RPRGLFGIGDTS-----ILPRVINLSQKLGIPLIGDGRQLMDMTCVENVALAIRLAIEAL 218
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
E A ++N+ + + + + G P++
Sbjct: 219 E-AKGEVYNITNGEPRAFRDLLEESLKGLGYPIK 251
>gi|428225736|ref|YP_007109833.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
gi|427985637|gb|AFY66781.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
Length = 321
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 134 GKTVWGDPAE-VGNVVGGVTFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFL 183
GKT W P E V VV +L ++ N++ +A +GVK F+
Sbjct: 51 GKTDWRSPLEGVTEVVHLAARAHILRDDAADPEAEFRRVNVEGTLNLARQCAQAGVKHFV 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS--------NWASFRPQYMIG 235
F+SS G + E PD + + + + + RP + G
Sbjct: 111 FVSSVGAIATLSDRALNETSPCSPDTPYGRSKLRAEDGLKAIAQASGMTYTILRPTLVYG 170
Query: 236 SGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GN + E ++VR P+P+ GS + +V +L + +E+PEA +
Sbjct: 171 PGNPGNMERLM--KLVRLGLPLPL-GSIRNLRSFVYVENLVDAILCCLEHPEARNQTF-- 225
Query: 295 LVSD-RAVTLDGMAKLCAQAAGLPVEI 320
+VSD + V+ + + AQ+AG P +
Sbjct: 226 VVSDGQDVSTPQLIQKIAQSAGYPCRL 252
>gi|365131044|ref|ZP_09341682.1| hypothetical protein HMPREF1032_02761 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363619145|gb|EHL70471.1| hypothetical protein HMPREF1032_02761 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 345
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 34/253 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI + L G E+T++ G ++ + P R +++A D A V
Sbjct: 7 GGTGVISTAVGALALARGWELTLLNRG---TNAARAP---RGARVLTADIH----DEAAV 56
Query: 145 GNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG 202
+G FDV +D D R V +A + Q++FISSA Y KP P E
Sbjct: 57 KAALGDERFDVAVDFIAFTEEDVQRDVRLFAGRAA--QYIFISSASAYQKPVAALPITES 114
Query: 203 DVV----------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN-------KDCEEW 245
+ K + +E+Y E F RP + G + C +
Sbjct: 115 TPLANPYWQYSRDKIACENFLMERYREEGFPV-TIVRPSHTYCGGKAVVALHGARGCWQ- 172
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
RI +PV IPG G H D + + NP A + + ++ +D +T +
Sbjct: 173 TLARIRAGKPVIIPGDGTSLWTATHADDFAVGFVGLMGNPHALGTAV-HITTDEGMTWNQ 231
Query: 306 MAKLCAQAAGLPV 318
+ + A A G P+
Sbjct: 232 IYAVLASAMGAPL 244
>gi|319787032|ref|YP_004146507.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis
11-1]
gi|317465544|gb|ADV27276.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis
11-1]
Length = 387
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 106/281 (37%), Gaps = 55/281 (19%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG G + L GH VT+ G ++P E+ G GD
Sbjct: 51 GGTGFTGPFQVAYALARGHRVTLFNRG-------RRPSPEWPGEVEQLHGDRETGDL--- 100
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG------VKQFLFISS---------AG 189
+ G +DV +DN + W + +G V +LFIS+ AG
Sbjct: 101 -EALRGRRWDVCIDNPTS-------LPSWVRDAGRVLRGNVGHYLFISTISVYADGSRAG 152
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVE--------KYISE-----NFSNWASF-RPQYMIG 235
I + A P+ D + + + K +SE F + RP Y++G
Sbjct: 153 IDEDAPLAPYRGRDAMAETRQTLIADMENLYGPLKALSEVEARRQFGERTTIVRPGYIVG 212
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS-MLTLAVENPEAASSNIFN 294
+ D ++ R+ + + +PG G+ + RDL M+ LA E ++ FN
Sbjct: 213 PRDETDRFTYWPHRVAQGGEILVPGDGLDPIQVIDGRDLGEWMIRLA----EQGTTGTFN 268
Query: 295 LVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 334
V +T+D + C + + H DP A ++A+K
Sbjct: 269 AVGPAYPLTMDALLHGCQAVTSTALTLTHVDP--AFLEAQK 307
>gi|254478570|ref|ZP_05091944.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035499|gb|EEB76199.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum
DSM 12653]
Length = 315
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG +L LL G +VT++ +N D P R N KT D
Sbjct: 7 TGGAGFIGSHLVDRLLKEGWQVTVV----DNFDPFYDPAIKRKNISAHFDYKTYRLFEID 62
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++ + +T +DV++ K N+ + + ++A+ G+KQF
Sbjct: 63 IRDMEALHEKLTDDYDVIVHLAAKAGVRPSIQDPIGYQEVNVRGTQNLLEFARHRGIKQF 122
Query: 183 LFISSAGIYKPADEPPHVEGD-VVKPDA------------GHVQVEKYISENFSNWASFR 229
+F SS+ +Y P E D V+KP + GHV Y + + R
Sbjct: 123 VFASSSSVYGINHNVPWKEDDCVLKPISPYASTKVSGELLGHVYSHLY----GIRFIALR 178
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G D F R++ + +P+PI G G + ++ D+ + A++ A
Sbjct: 179 FFTVYGPRQRPDLAIHKFARLMLEGKPIPIYGDGSSRRDYTYIDDIIEGVRRAMDYT-AT 237
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+ NL +++ V+L M + +A G+
Sbjct: 238 LYEVINLGNNQIVSLLEMVRTLEEALGI 265
>gi|383111489|ref|ZP_09932300.1| hypothetical protein BSGG_4326 [Bacteroides sp. D2]
gi|313696791|gb|EFS33626.1| hypothetical protein BSGG_4326 [Bacteroides sp. D2]
Length = 335
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSKNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALDKPLNALH 246
>gi|374852099|dbj|BAL55040.1| hypothetical conserved protein [uncultured Acidobacteria bacterium]
Length = 310
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPH 199
A + VG T+DVV+DN G + R D + ++FLF S+A +Y ++ P+
Sbjct: 28 ASLREAVGSRTWDVVIDNIGFTAEESRLAVD-VFAGRTERFLFTSTAAVYACLEDIVNPY 86
Query: 200 VEGDVVK-PDA-------------GHVQVEKYISENFSNW----ASFRPQYMIGSGNNKD 241
E D + P+ G ++ E+ + + + R +IG ++
Sbjct: 87 REEDTDRLPERARARQDPQLAYGFGKLEAERVLQQAYQERGFPITILRLPIVIGPRDHTL 146
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
++ RI + P+ +P G + D+ +E E + +++N+ + V
Sbjct: 147 RAYSYWVRIKDRAPLILPDGGRVDWRFIYSGDVVRAFIRLLEE-ERSIGHVYNIAQEEIV 205
Query: 302 TLDGMAKLCAQAAGLPVEIV 321
++ KL A+ G+ VEIV
Sbjct: 206 SVREFVKLSAEILGIEVEIV 225
>gi|423531697|ref|ZP_17508122.1| hypothetical protein IGE_05229 [Bacillus cereus HuB1-1]
gi|402443425|gb|EJV75327.1| hypothetical protein IGE_05229 [Bacillus cereus HuB1-1]
Length = 307
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLINV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + + +++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCSENSIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E S+ R ++ + + + ++
Sbjct: 119 VPFKENDIKMPKSAYGKAKLMSEDYLKEYASDSFKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNVGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|302537022|ref|ZP_07289364.1| fclA [Streptomyces sp. C]
gi|302445917|gb|EFL17733.1| fclA [Streptomyces sp. C]
Length = 314
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 31/255 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G +A+ L GH+V +T G D + V + A+
Sbjct: 17 AGHRGLVGSAVARRLTADGHQV--LTRGRTELDLRDAAATEAYLRDVRPDAVVL--AAAK 72
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP----- 197
VG ++ T+ V + NL V A ++GV + LF+ S+ IY K A +P
Sbjct: 73 VGGIMANSTYPVQFLED--NLRIQLSVIAGAHAAGVGRLLFLGSSCIYPKLAPQPITEDA 130
Query: 198 -------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
P E + AG VQV+ Y + +++ S P + G G+N D +
Sbjct: 131 LLTGPLEPTNEAYALAKIAGIVQVQSYRKQYGASYVSAMPTNLYGPGDNFDLQSSHVLPA 190
Query: 244 --EWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + R V + GSG HV DL++ + +E + N+
Sbjct: 191 LIRRFHEAAAEGRDEVVLWGSGTPRREFLHVDDLAAACVVLLERYDG--DEPVNIGCGED 248
Query: 301 VTLDGMAKLCAQAAG 315
+T+ +A+ A+ G
Sbjct: 249 LTIKELAETVAEVTG 263
>gi|443669494|ref|ZP_21134708.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029030|emb|CAO90016.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330221|gb|ELS44955.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 326
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSPCHPDSPYGRSKLQAEQALIQLAKDSNMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAVKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|160878868|ref|YP_001557836.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans
ISDg]
gi|160427534|gb|ABX41097.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans
ISDg]
Length = 339
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 52/288 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG +I ++K+LL E+ ++ G+ N D + K
Sbjct: 2 KVLFI----GGTGIISQAISKQLLKQNSELYVLNRGNRNMD-------------LPTNVK 44
Query: 136 TVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRP---VADWAKSSG-VKQFLFISSA 188
T+ D E V ++ + FDVV D A P D+ G KQ++FISSA
Sbjct: 45 TIIADINEEEKVKELIKDLEFDVVAD-----FIAFVPEHLERDYRLFQGKTKQYIFISSA 99
Query: 189 GIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM---- 233
Y KP + P+ E K ++ Y ENF RP +
Sbjct: 100 SAYQKPLSDYRINEGTPLSNPYWEYSRNKIHCEEYLMKLYREENFPV-TIVRPSHTYDEK 158
Query: 234 ---IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+G K + DR+++ +PV I G G + H D + + N A
Sbjct: 159 SIPLGVHGRKGSYQ-VIDRMLKGKPVIIHGDGTSLWTMTHNSDFAKGFLGLMGNIHAIGE 217
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
++ + SD +T + + + A L VE Y ++ +DA + F
Sbjct: 218 SV-QITSDETLTWNQIYQCIADC--LSVEFKPYYVSSSFLDAVSEYDF 262
>gi|386402153|ref|ZP_10086931.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
gi|385742779|gb|EIG62975.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
Length = 333
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G L +LL +GH+VT++ + G++ D ++ P R K D
Sbjct: 11 TGGAGYVGSVLVPQLLAAGHKVTVLDLFMYGEDVFDAVRDNPNLRLI-------KGDIRD 63
Query: 141 PAEVGNVVGG---VTFDVVLDNN---------GK--NLDAVRPVADWAKSSGVKQFLFIS 186
A + + G V + N+ GK N D RP+ AK +G+K+F++ S
Sbjct: 64 EAAINEALRGNNAVIHLACISNDPSFELDPGLGKSINYDCFRPMVRAAKKAGIKRFIYAS 123
Query: 187 SAGIYKPADEPPHVEGDVVKP 207
S+ +Y DE E +P
Sbjct: 124 SSSVYGIKDEAEVTEDLSCEP 144
>gi|448304618|ref|ZP_21494554.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445589999|gb|ELY44220.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 306
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 107/285 (37%), Gaps = 56/285 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L+ +GG IG L EL G+EVT + SD + AG +
Sbjct: 2 KILV----AGGTGFIGTALCSELHERGYEVTALARDPRGSD-------------LPAGVE 44
Query: 136 TVWGDPAEVGNVVGGVT-FDVV---------------LDNNGKNLDAVRPVADWAKSSGV 179
T GD + ++ G V D V +D+ +L + A+ V
Sbjct: 45 TATGDVSAYDSIAGTVADHDAVVNLVALSPLYKPPAGVDHETVHLGGTVNLVRAAEDGDV 104
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
+F+ +S+ G AD P+ + D ++ E + ++ W FRP + G G
Sbjct: 105 DRFVQMSALG----AD--PNGDTDYIRAKG---DAEAVVRDSHLEWTIFRPSVVFGEGAE 155
Query: 240 KDCEEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
F ++ P +PG G V DL ML A+E+P I+ +
Sbjct: 156 -------FVEFTKQLTTPYVTGLPGGGKTRFQPIWVGDLVPMLADALEDPTHV-GEIYEI 207
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA--GIDAKKAFPF 338
+ VTL +L A G V IV A G+ A PF
Sbjct: 208 AGPQIVTLADATELAYAAEGKSVSIVSVPMALAKFGLTAADPLPF 252
>gi|398967306|ref|ZP_10681832.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM30]
gi|398144862|gb|EJM33674.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM30]
Length = 309
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 108/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG---------- 133
+GG IG +L LL +GH V I+ D ++ K P + + G
Sbjct: 9 TGGAGFIGSHLTDALLATGHSVRILD--DLSTGKRSNLPLDNPQVELIVGDVADATLVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A++ PE N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFLYVEDLVDVLVQAIDKPE-VEVGAMN 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A+ L M + G LP + Y P +G
Sbjct: 242 VGWNQAMNLKQMLQALQDVVGELPP--ISYGPARSG 275
>gi|375096232|ref|ZP_09742497.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
gi|374656965|gb|EHR51798.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
Length = 288
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 211 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIA 269
++ E+ + + +W RP + G +++ ++R+ PV P+PG G +
Sbjct: 116 RLEAEEAVRASALDWTIIRPTMIYGGPGDRNIARLLS--VLRRTPVLPVPGGGKRLLQPV 173
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
HV DL++ + AVE+P AA +++ + L A+L A+A
Sbjct: 174 HVEDLAAAVLNAVESP-AAPGRTYDVAGPEPMPL---AELLAEA 213
>gi|332558964|ref|ZP_08413286.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
gi|332276676|gb|EGJ21991.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
Length = 368
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+RP I G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+
Sbjct: 235 ERPT-IFEDGEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGSAYTIAGVARLLAE 292
Query: 313 AAGLP 317
A G P
Sbjct: 293 AMGRP 297
>gi|320527900|ref|ZP_08029067.1| NAD dependent epimerase/dehydratase family protein [Solobacterium
moorei F0204]
gi|320131696|gb|EFW24259.1| NAD dependent epimerase/dehydratase family protein [Solobacterium
moorei F0204]
Length = 339
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 19/210 (9%)
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D A++ ++G FD V+D D R + + +Q++FIS+ ++
Sbjct: 53 NDTAKMQKIIGNTVFDAVIDFVVYKSDQARDRV-YLFQNHTRQYIFISTVVVFNHESNFI 111
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIG------SGNNKDCEE 244
E V K +K E+ N A+ RP G S K+C
Sbjct: 112 LNEDSVQKNRLSKYGRDKAACEDVFNQAAKKGFPITIVRPSQTYGFDCFPLSVKGKNC-- 169
Query: 245 W-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W RI+ +PV I G G ++ H D + + N A + +I NL++ VT
Sbjct: 170 WSVVSRILNDKPVIIHGDGQSIWHMMHSYDFAYNFIQLIGNMNAINRSI-NLINPEIVTW 228
Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
D + +A V+ VH + + K
Sbjct: 229 DMIYDSLGKALNRKVQKVHITSETLAMSTK 258
>gi|163940887|ref|YP_001645771.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
gi|163863084|gb|ABY44143.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
Length = 328
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDVRVNL 236
>gi|418244263|ref|ZP_12870686.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
gi|354511669|gb|EHE84575.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
Length = 329
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 105/284 (36%), Gaps = 69/284 (24%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLSEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMRAL-------GVH 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ LA+E+ EA IFNL S ++ + ++C + G P+
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPI 269
>gi|336427692|ref|ZP_08607687.1| hypothetical protein HMPREF0994_03693 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336008853|gb|EGN38857.1| hypothetical protein HMPREF0994_03693 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 286
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 99/267 (37%), Gaps = 57/267 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI +G +G Y A+ LLG+G EV +N DK+ K
Sbjct: 3 KILI----TGATGNVGRYTAEYLLGAGEEVK---AASKNKDKVTK--------------- 40
Query: 136 TVWGDPAEVG--NVVGGVTFDVVLDNNGK----------NLDAVRPVADWAKSSG-VKQF 182
++G+ AE + TFD L + N + + P D K G ++
Sbjct: 41 -LFGNAAEYCEFDFQRPETFDGALKETDRVFLMRPPQMGNPEELYPFLDTVKKKGDIRLV 99
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+F+S G K P H ++EKY+ + RP + + + +
Sbjct: 100 VFLSLQGAEKNPMPPHH-------------KIEKYMIHTGLPYCFMRPGFFMQNLSGVHA 146
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E +FDRIV VP +G T RD+ + + + PE + + A+
Sbjct: 147 FEIKYFDRIV----VP---AGKSLTGFIDARDIGDISGMVLSRPEGHEEKAYEITGPEAI 199
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAA 328
A++ +Q G + P A
Sbjct: 200 DYYKAAEILSQELGRKITYTEVSPGKA 226
>gi|448359606|ref|ZP_21548256.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445642241|gb|ELY95310.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 398
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 14/188 (7%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 214
+N NLDA V D A+ + + SSA +Y DE P E +P + + + +
Sbjct: 143 SNETNLDASLLVLDQARQEDAR-VVLASSAAVYGHPDELPISETATTEPTSPYGIQKLAL 201
Query: 215 EKYIS--ENFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTN 267
++Y + + +Y G + F ++ P+ I G G Q +
Sbjct: 202 DQYARSYHELYDLPTVALRYFNAYGPRQQGPYSGVISTFLEQARADEPITIEGDGEQTRD 261
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
HV D+ LA A +N+ + ++ +A+L A G IVH DP++
Sbjct: 262 FVHVSDIVRANLLAATTD--AVGEAYNVGTGERTSIRDLAELVRDAVGSSSPIVHRDPRS 319
Query: 328 AGIDAKKA 335
I +A
Sbjct: 320 GDIRHSRA 327
>gi|423413198|ref|ZP_17390318.1| hypothetical protein IE1_02502 [Bacillus cereus BAG3O-2]
gi|423431017|ref|ZP_17408021.1| hypothetical protein IE7_02833 [Bacillus cereus BAG4O-1]
gi|401102758|gb|EJQ10744.1| hypothetical protein IE1_02502 [Bacillus cereus BAG3O-2]
gi|401118042|gb|EJQ25874.1| hypothetical protein IE7_02833 [Bacillus cereus BAG4O-1]
Length = 341
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEVFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 50 N--GDVSSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIGRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|218898106|ref|YP_002446517.1| isoflavone reductase [Bacillus cereus G9842]
gi|218544419|gb|ACK96813.1| isoflavone reductase [Bacillus cereus G9842]
Length = 345
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 49/290 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEIFPEVEQLIGDRN- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R D K + +K ++FISS +YK D
Sbjct: 51 ---GDVSSLEN----RKWDVVVDTCGFSPHHIRNTGDVLKDN-IKHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ EN A + N
Sbjct: 161 LLSGMFDYTDRLPYWIGRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ D +T++ + C + E V + + ++ K P+ M
Sbjct: 221 VTGPNYD--LTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEM 266
>gi|449092518|ref|YP_007424959.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449026275|gb|AGE81438.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 293
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 5 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 54
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 55 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 106
Query: 192 KPA 194
+PA
Sbjct: 107 EPA 109
>gi|77464089|ref|YP_353593.1| NAD-dependent dehydratase/epimerase [Rhodobacter sphaeroides 2.4.1]
gi|77388507|gb|ABA79692.1| NAD-dependent dehydratase/epimerase [Rhodobacter sphaeroides 2.4.1]
Length = 368
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+RP I G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+
Sbjct: 235 ERPT-IFEDGEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGAAYTIAGVARLLAE 292
Query: 313 AAGLP 317
A G P
Sbjct: 293 AMGRP 297
>gi|86359933|ref|YP_471823.1| NDP-glucose dehydratase epimerase [Rhizobium etli CFN 42]
gi|86284035|gb|ABC93096.1| probable NDP-glucose dehydratase epimerase protein [Rhizobium etli
CFN 42]
Length = 367
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD+++ LA+E P AA+ ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVATAFRLALEKP-AAAGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLP 317
+A L A A G+P
Sbjct: 285 VATLLADAMGVP 296
>gi|318060938|ref|ZP_07979659.1| hypothetical protein SSA3_23540 [Streptomyces sp. SA3_actG]
gi|318076765|ref|ZP_07984097.1| hypothetical protein SSA3_08592 [Streptomyces sp. SA3_actF]
Length = 345
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 174 AKSSG-VKQFLFISSAGIYKPADEPPHV-----EGDVVKPDA--------GHVQVEKYIS 219
A+ SG +K+ +F+SSA +Y E P EGD + P + G Q +S
Sbjct: 122 ARHSGTLKRLVFVSSASVYGRGPEAPTRAARFSEGDELHPVSVYANTKVWGEHQTALALS 181
Query: 220 ENFSNWASFR-------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
++A R PQ ++ ++ W+ R P+P+ G G Q + HV
Sbjct: 182 GRDDSYAVVRYFSVYGEPQ-VVKENSHSWVVAWYAMRAALGLPLPLNGGGKQIRDFVHVD 240
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
D++ LA +P A + + N+ + RA ++ +A L
Sbjct: 241 DIADATLLAALSPRAHRATL-NVGTGRATSIREIADLV 277
>gi|409730596|ref|ZP_11272158.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448723290|ref|ZP_21705813.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445787953|gb|EMA38680.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 321
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG 145
GH IG YL LL +GHEV +T G+ S+ + P E VS + + G
Sbjct: 10 GH--IGSYLVPRLLAAGHEVVSVTRGE--SEPYRSPGSWAQVERVSIDREAAEAE-GTFG 64
Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
+ + DVV+D ++ + A V+ L + ++ P+ E P E
Sbjct: 65 ERIRDLRPDVVIDLICFEPESAEQLVR-ALDGEVQHLLHCGTIWVHGPSTEVPTTEDQPR 123
Query: 206 KPDAGH----VQVEKYI-----SENFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIV 251
+P + ++E Y+ + F P +++G G + F+R+
Sbjct: 124 EPFGEYGRKKAEIESYLLDVARRDGFPV-TILHPGHIVGPGWDPLNPAGHFSPEVFERLA 182
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+ +P G++ + H D++ A+ N A F++VS A+TL G A+ A
Sbjct: 183 NGEELALPNLGLETVHHVHADDVAQAFEAALNNWSRAVGESFHVVSPAALTLRGYAEAVA 242
>gi|424890649|ref|ZP_18314248.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393172867|gb|EJC72912.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 317
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GH +G YL L+ +GH+V ++ G P++ + S +
Sbjct: 2 RILVIGAT--GH--VGTYLVPRLVEAGHDVVTISRGTAK-------PYSANHAWASVDQR 50
Query: 136 TVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D AE+ G VV GV D+V+D L + + A + V FL +
Sbjct: 51 QM--DRAEMERTGEFGPVVRGVKADIVIDMICFTLASAEHLVT-ALAGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFR--------PQYMIGSG--- 237
+ + P +E + K G ++K E + A R P +++G G
Sbjct: 108 THGYSTTVPTLE-EAPKSPFGDYGIQKAAIETYLLQQARLRGFPATIIHPGHIVGPGWAP 166
Query: 238 ----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
N + + F + R + +P G++ + H D+++M A+ + A++ F
Sbjct: 167 LNPAGNFNPQ--VFSTLARGDALVLPNFGLETVHHVHADDVAAMFMGAIASWNASTGESF 224
Query: 294 NLVSDRAVTLDGMAK 308
+ VS++A+TL G A+
Sbjct: 225 HAVSEQALTLRGFAE 239
>gi|373854338|ref|ZP_09597136.1| UDP-glucose 4-epimerase [Opitutaceae bacterium TAV5]
gi|372472205|gb|EHP32217.1| UDP-glucose 4-epimerase [Opitutaceae bacterium TAV5]
Length = 317
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 51/295 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+K L+ +GG IG +L + LL +G EV ++ D + + + + G
Sbjct: 9 RKALV----TGGAGFIGGHLVRTLLEAGTEVVVL-------DNFRTGSPDNLAGLPAPGV 57
Query: 135 KTVWG---DPAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSS 177
+ V G D A V + V G + + + + N+ + V + A ++
Sbjct: 58 RLVRGCITDRATVRDAVQGCDAVFHLAALVSVPESMERIHECVTLNVTGLLTVLEEAAAA 117
Query: 178 GVKQFLFISSAGIY------------KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 225
G ++ + SSA IY +PA + P+ + K D G + +
Sbjct: 118 GARKLVLSSSAAIYGDDPEVPKREDMRPAPKSPYA---ITKLD-GEYYCALFAAAGRIET 173
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
AS R + G N + F R + +PV I G G Q + +VRD+ +
Sbjct: 174 ASLRYFNVFGPRQNPNSAYAAAVPIFIRRALAGQPVAIHGDGGQTRDFVYVRDVVAANLF 233
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
A A + +FN+ ++T+ +A+ G IVH P+ + +A
Sbjct: 234 AART--AGLTGVFNVGYGGSLTILELAQRIIAQTGSASRIVHEAPRPGDVRHSRA 286
>gi|300782135|ref|YP_003762426.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|384145340|ref|YP_005528156.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|399534017|ref|YP_006546679.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|299791649|gb|ADJ42024.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|340523494|gb|AEK38699.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|398314787|gb|AFO73734.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
Length = 309
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 103/276 (37%), Gaps = 45/276 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVL +GG I ++ LL G+ V I D M + R NE V+ G
Sbjct: 4 KKVLF----TGGGGFIAAHVIPLLLEGGYTVRIF-------DNMTRGDRARVNEFVATGQ 52
Query: 135 KTVWGDPAEVGNVVG----GVTFDVVLDNNGKNLDAVRP-------------VADWAKSS 177
+ G V G T + N P V A
Sbjct: 53 VELVEKDVRYGGAVREAMRGCTHVIHFATVSINKSIADPHESIDINMIGNHNVFAAAADE 112
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWASFR 229
GV++ +F S+A +Y P E D ++P AG + Y + +W + R
Sbjct: 113 GVERLVFASTASVYGDPKRLPMHEDDELRPLTPYCISKRAGEDLLGFYERQKGLSWNALR 172
Query: 230 PQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ G G + F R+ +P I G G Q + HV DL+ + A+E+
Sbjct: 173 FFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLAKAVVAALES 232
Query: 285 PEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVE 319
A N+ N+ + ++ +AK+ +A G+ VE
Sbjct: 233 ERA---NLPINIGTGIDTSIAALAKILIEAVGVDVE 265
>gi|423427534|ref|ZP_17404565.1| hypothetical protein IE5_05223 [Bacillus cereus BAG3X2-2]
gi|423506666|ref|ZP_17483255.1| hypothetical protein IG1_04229 [Bacillus cereus HD73]
gi|401108873|gb|EJQ16803.1| hypothetical protein IE5_05223 [Bacillus cereus BAG3X2-2]
gi|402446394|gb|EJV78253.1| hypothetical protein IG1_04229 [Bacillus cereus HD73]
Length = 290
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 2 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 52 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 103
Query: 192 KPA 194
+PA
Sbjct: 104 EPA 106
>gi|408532418|emb|CCK30592.1| reductase [Streptomyces davawensis JCM 4913]
Length = 350
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 102/276 (36%), Gaps = 43/276 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +G + L G EVT+ F+R G +++ GD P
Sbjct: 7 GGTEFVGRPTVEAALSRGWEVTV---------------FHRGRHPAPDGVRSLHGDRTAP 51
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------D 195
+ + G +DVV+D AVR A + V +++++SS +Y+ A +
Sbjct: 52 DGLAALAGTEEWDVVIDTWSAAPSAVRDTAQLLRDR-VGRYVYVSSRSVYEWAPPAGSTE 110
Query: 196 EPPHVEGDVVKPDAGHVQV-------EKYISENFSNWASF--RPQYMIGSGNNKDCEEWF 246
+ P V G DAG E + + F S R +IG N W+
Sbjct: 111 DAPVVTG--ASADAGQTDYAQDKRGGELAVLDAFGPDRSVLARAGLIIGPYENVGRLPWW 168
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDG 305
+R+ R PV PG VRDL+ L A E S +NL S T+
Sbjct: 169 LNRMARGGPVLAPGPRELPLQYVDVRDLAEWLLGAAEQ---GLSGPYNLTSASGHATMGT 225
Query: 306 MAKLCAQAAGLPVEIVHYDPKA---AGIDAKKAFPF 338
+ C G E+ P+ AGI+ P
Sbjct: 226 LLDACVAVTGGTAELRWTAPEVILKAGIEPWTELPV 261
>gi|420262459|ref|ZP_14765100.1| hypothetical protein YS9_1149 [Enterococcus sp. C1]
gi|394770216|gb|EJF50020.1| hypothetical protein YS9_1149 [Enterococcus sp. C1]
Length = 292
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 38/202 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G YL + L+ G +VTI T G D D++ + F+R
Sbjct: 3 KKVLVL----GGTRFFGKYLVQSLVDQGCDVTIATRGKTTDSFGDQVNRLVFDR------ 52
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D + + T+DV+ DN + + + + K+++ SS Y
Sbjct: 53 -------TDEESIKTTLTQETYDVIYDNIAYTSNDIEIL---LRHVTPKRYIVTSSMSAY 102
Query: 192 -------KPADEPPHVEG------DVVKPDAGHVQVEKYISENFSNWAS--FRPQYMIGS 236
K D P E + V G VE+ +++N+S S R Y+IG+
Sbjct: 103 HELHFDLKETDFDPAKEAVKIVCSEEVNYAEGKRTVEEILTQNYSQIPSVFVRFPYVIGA 162
Query: 237 GNNKDCEEWFFDRIVRKRPVPI 258
+ ++ D +++++P+ +
Sbjct: 163 DDYTKRFAFYIDHLIKQKPMAV 184
>gi|126462933|ref|YP_001044047.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|126104597|gb|ABN77275.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
Length = 368
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+RP I G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+
Sbjct: 235 ERPT-IFEDGEQKRDFVHVRDVACAFRLALETPDAA-GEVINVGSGAAYTIAGVARLLAE 292
Query: 313 AAGLP 317
A G P
Sbjct: 293 AMGRP 297
>gi|421503857|ref|ZP_15950802.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina DLHK]
gi|400345361|gb|EJO93726.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina DLHK]
Length = 306
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 43/284 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN---------EIVS 131
+GG IG +L LL +GH V ++ ++G ++ + P E
Sbjct: 7 TGGAGFIGSHLVDALLAAGHGVCVLDNLSMGKRSNLPLDNPRLRFIEGDVADAAQIEQAM 66
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG TV A V +V V D + + N V + + GV++ L+ SSA IY
Sbjct: 67 AGCDTV-AHLAAVASVQASV--DDPVATHQSNFIGTLNVCEAMRRHGVRRVLYASSAAIY 123
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSGNN--- 239
E ++ D K V+K SE + ++ A FR + G +
Sbjct: 124 GNNGEGLAIDEDTAKAPLTPYAVDKLASEQYLDFYRRQHGLEPAVFRFFNIFGPRQDPSS 183
Query: 240 --KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-----VENPEAASSNI 292
F R + +P+ + G G Q + +V DL +L VE P
Sbjct: 184 PYSGVISIFTQRAQQGQPISVFGDGEQTRDFFYVGDLIELLLQGLFGEVVEQP------- 236
Query: 293 FNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
N+ ++AV+L +A++ A GLP + H +A I +A
Sbjct: 237 VNVGWNQAVSLKQLLAEIGALCGGLP-PVTHLPARAGDIRHSRA 279
>gi|399006298|ref|ZP_10708825.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
gi|398122464|gb|EJM12056.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
Length = 309
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL G+ V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGYSVRILD--DLSTGKPGNLPLDNPRVELIQGD----VADAA 62
Query: 143 EVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V + G + D + + N V + + +GVK+ LF SSA
Sbjct: 63 LVARAMSGCQAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNN 239
+Y E ++ D K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGESIDEDTPKAPLTPYASDKLASEYYFDF--YRRQHGLEPAIFRFFNIFGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L ++E P+ +
Sbjct: 181 QDPSSPYSGVISIFCERAQKGLPITVFGDGEQTRDFMYVEDLVDVLVQSLETPQLEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL + ++ + G LP + Y P +G
Sbjct: 241 -NVGLNQATTLKQLLEVLGEVVGQLPP--ISYGPARSG 275
>gi|395647892|ref|ZP_10435742.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 311
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V ++ + G ++ + P V+ A
Sbjct: 11 TGGAGFIGSHLVDALLAKGYSVRVLDNLSTGKRSNLPLDNPRVELLEGDVADAEWVARAA 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G T A V +V V D + + N V + + +GVK+ +F SSA +Y
Sbjct: 71 IGVTAVVHLAAVASVQASV--DDPVSTHQSNFVGTLNVCEAMRKAGVKRVVFASSAAVYG 128
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ + K +K SE + ++ +R Q+ + G +D
Sbjct: 129 NNGEGASIDEETAKAPLTPYASDKLASEYYLDF--YRRQHGLEPVIFRFFNIFGPRQDPS 186
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +L A+E +A I N+
Sbjct: 187 SPYSGVISIFSERAQQGLPITVFGDGEQTRDFMYVEDLVGVLVQAIEAADAPLGAI-NVG 245
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+R TL + + +A G LP V Y P +G
Sbjct: 246 WNRTTTLKQVLQALEEALGALPA--VTYGPARSG 277
>gi|423513108|ref|ZP_17489638.1| hypothetical protein IG3_04604 [Bacillus cereus HuA2-1]
gi|402446151|gb|EJV78014.1| hypothetical protein IG3_04604 [Bacillus cereus HuA2-1]
Length = 314
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 50 FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
F + R S+ F VK + KKVL++ GG G +L + LL +GH+VTI T
Sbjct: 2 FFYFSVYNNRGSILQF-VKTGMMKVKKVLVL----GGTRFFGKHLVEVLLQAGHDVTIAT 56
Query: 110 VG---DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDA 166
G D +K+ +R +E + + E G ++D+V DN + +A
Sbjct: 57 RGVTEDSFGSAVKRLIVDREDE-------RLLEERFE------GKSYDIVYDNLCYSSNA 103
Query: 167 VRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + K K+++ SS +Y+PA
Sbjct: 104 AKIICEVLKGK-TKKYIMTSSMAVYEPA 130
>gi|270284007|ref|ZP_05965409.2| oxidoreductase [Bifidobacterium gallicum DSM 20093]
gi|270277926|gb|EFA23780.1| oxidoreductase [Bifidobacterium gallicum DSM 20093]
Length = 221
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 158 DNNGKN-LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE- 215
DN+ N +D V D KS+ V + ++ISS GIY DE P V GD + GH+ VE
Sbjct: 82 DNDHPNTVDQAESVVDAMKSAKVSRLIWISSLGIY---DEVPGVYGDWNRKTLGHILVEY 138
Query: 216 ----KYISENFSNWASFRPQYM 233
K I E+ ++ RP ++
Sbjct: 139 AEAAKVIEESGLDYTIIRPAWL 160
>gi|167031562|ref|YP_001666793.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1]
gi|166858050|gb|ABY96457.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1]
Length = 310
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 28/248 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGG---KTV 137
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G +T
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQTA 68
Query: 138 WGDPAEVG-NVVGGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
G A V V V V + + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYGNN 128
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD---- 241
E + + K V+K SE + ++ +R Q+ + G +D
Sbjct: 129 GEGESIAEETPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPSSP 186
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+ +
Sbjct: 187 YSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIGLN 245
Query: 299 RAVTLDGM 306
+A +L+ +
Sbjct: 246 QATSLNQL 253
>gi|452960745|gb|EME66060.1| UDP-glucose 4-epimerase [Rhodococcus ruber BKS 20-38]
Length = 330
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 57/290 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG +G + LL GHEV ++ + N+D V AG + V GD A
Sbjct: 6 TGGAGYVGSVCSTVLLEQGHEVVVLDDLSTGNADA------------VPAGVEFVEGDIA 53
Query: 143 EVGNVV----GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
V G FD VL + N+ A + D + SG +
Sbjct: 54 TAAAAVLGDGGRSRFDGVLHFAAQSLVGESVEQPDKYWHGNVVATLALLDAIRRSGTPRL 113
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW------ASFRPQYM--- 233
+F S+A Y + P E +P + + I S++ A+ +Y
Sbjct: 114 VFSSTAATYGEPERVPITEDAPARPTNPYGATKLAIDHAISSYTRAYGLAATSLRYFNVA 173
Query: 234 ---IGSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLT 279
G+G N+ E +++ + + + G+ G + HV+DL+
Sbjct: 174 GAYRGAGENRVVETHLIPLVLQVALGQREHISVFGTDWPTKDGTAVRDYIHVKDLADAHL 233
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
LA+E ++NL S T+ + + C + GLP+ +V P+ AG
Sbjct: 234 LALEAARPGEHAVYNLGSGEGFTVREVIEACRRVTGLPITVVDA-PRRAG 282
>gi|77461251|ref|YP_350758.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1]
gi|77385254|gb|ABA76767.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens Pf0-1]
Length = 309
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMREAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLAGEQYFDF--YRRQHGLEPAIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFMYVEDLVDVLVQALEKPQVDVGAV-N 241
Query: 295 LVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ ++A L M A L A LP V Y P +G
Sbjct: 242 VGWNQATNLKQMLAALEAVVGELPP--VSYGPARSG 275
>gi|392394625|ref|YP_006431227.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525703|gb|AFM01434.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 324
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 35/289 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAG 133
KVL+ +GG IG +L + L+ G EV+I+ M P F+ + I S
Sbjct: 2 KVLV----TGGAGFIGSHLVESLVCQGIEVSIIDNLVSGQSCMSHPLVAFHHMD-ICSRD 56
Query: 134 GKTVW--GDPAEVGNVVGGVTFDVVLDN---NGK-NLDAVRPVADWAKSSGVKQFLFISS 187
K V P V ++ L + + K N+ + + + + V++ +F S+
Sbjct: 57 AKAVIIREKPDVVFHLAAQTDVRKSLQDPQYDAKVNICGTINLLEACREAKVRKLIFTST 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFRPQYMIGSGN 238
+ +Y + P E D V P + + K+ +E++ ++ R + G G
Sbjct: 117 SAVYGDLHKEPISEEDPVAP-ISYYGLSKWAAESYILLFHQLYGISYTILRFSNVYGPGQ 175
Query: 239 NKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
E F D I K+ + I G G Q + +V+D+ + AVE + I
Sbjct: 176 IAKGEGGVVAVFLDHIHAKKTLNIHGDGAQTRDFVYVKDVVRAIQAAVERGD---QEIIQ 232
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHY-----DPKAAGIDAKKAFPF 338
+ S +++ + + ++ G EI+H D K + +D +KA+
Sbjct: 233 VSSSGKTSVNQLVSMLSRIHGSAFEIIHTPANQGDVKHSCLDNRKAYEL 281
>gi|145295826|ref|YP_001138647.1| hypothetical protein cgR_1751 [Corynebacterium glutamicum R]
gi|417971575|ref|ZP_12612498.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
gi|140845746|dbj|BAF54745.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044057|gb|EGV39738.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
Length = 329
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 112/284 (39%), Gaps = 69/284 (24%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDE-----NSDKMKKPPFNRFNEIVSAGG- 134
+GG +G A LL GH+VTI+ + G+ ++ ++ + E++S GG
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVSDIVEEVLSEGGF 65
Query: 135 --------KTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ LA+E+ EA IFNL S ++ + ++C + G P+
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPI 269
>gi|228955696|ref|ZP_04117694.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228804065|gb|EEM50686.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 295
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 7 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 56
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 57 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 108
Query: 192 KPA 194
+PA
Sbjct: 109 EPA 111
>gi|229082658|ref|ZP_04215121.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock4-2]
gi|228701090|gb|EEL53613.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock4-2]
Length = 295
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 7 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 56
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 57 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 108
Query: 192 KPA 194
+PA
Sbjct: 109 EPA 111
>gi|379709875|ref|YP_005265080.1| UDP-galactose 4-epimerase [Nocardia cyriacigeorgica GUH-2]
gi|374847374|emb|CCF64444.1| UDP-galactose 4-epimerase [Nocardia cyriacigeorgica GUH-2]
Length = 326
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 53/276 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG +G A+ L+ GHEV ++ + N+D + P RF E GD A
Sbjct: 6 TGGAGYVGGVSAQVLIEDGHEVVVVDDLSTGNADGV--PAAARFVE----------GDIA 53
Query: 143 EVG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFI 185
E ++ FD VL ++L +P W + +G + +F
Sbjct: 54 EAAPELLASEKFDGVLHFAAQSLVGESVQQPEKYWHGNVVKTLELLEAMRRTGTPRLVFS 113
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS- 236
S+A +Y D+ P E +P + + I ++++ S R + G+
Sbjct: 114 STAAVYGEPDQVPITEDAPTRPTNPYGASKLAIDHAITSYSVAHGLAATSLRYFNVAGAY 173
Query: 237 ---GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAV 282
G N+ E +++ + + + G+ G + H+RDL+ LA+
Sbjct: 174 GGLGENRVVETHLIPLVLQVAAGHRESIAVFGTDWPTPDGTAIRDYIHIRDLADAHLLAL 233
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + S +FNL S ++ + C + GLP+
Sbjct: 234 RSAQPGSHRVFNLGSGTGFSVREVISACERVTGLPI 269
>gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
Length = 311
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASF 228
+GV +F+F S++G+Y + E D V+P +G+ + E YI + N+
Sbjct: 106 AGVSKFIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTIL 165
Query: 229 RPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
R + G G E F +R+ + P+ I G G Q + +V+D+ A+
Sbjct: 166 RYGNVYGPGQAAKGEGGVVALFMERLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAI-- 223
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
AA ++ + R +++ +A + G V V Y P AG
Sbjct: 224 -HAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPV-YSPARAG 266
>gi|344995847|ref|YP_004798190.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964066|gb|AEM73213.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 305
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH-- 211
D LD + L V + D+ VK+F+F SSA +Y + P E ++P++ +
Sbjct: 83 DAYLDCSINVLGTVN-LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGL 141
Query: 212 --VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGS 261
+ E+YI + NF+ + FR + G + E F +R+ + V I G
Sbjct: 142 SKLTSEEYIKMFAHNFNFEYIIFRCSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGD 201
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V D++ +A+ E + S FNL + + V+++ + ++ + G V
Sbjct: 202 GTQTRDFIYVEDVAEANCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV 258
Query: 322 HYDPKAAG 329
Y PK G
Sbjct: 259 -YQPKRPG 265
>gi|228989696|ref|ZP_04149678.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
pseudomycoides DSM 12442]
gi|228995896|ref|ZP_04155554.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock3-17]
gi|229003513|ref|ZP_04161331.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock1-4]
gi|228757751|gb|EEM06978.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock1-4]
gi|228763868|gb|EEM12757.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock3-17]
gi|228770030|gb|EEM18612.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
pseudomycoides DSM 12442]
Length = 306
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ SG+K+ + +S+ IY DE V + PD H KY++E
Sbjct: 66 NVLGTKHIIEGSQKSGIKRLIHVSTPSIYFYYDERQDVVENAKLPDTFVNHYAKTKYLAE 125
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I ++
Sbjct: 126 QSIDQAFNHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTEDVLVDITYID 183
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
++ L L + +P+ +N+ + V L + + + G V+ KAA
Sbjct: 184 NVVDALLLCMHSPKHTLGQKYNITNGERVNLYEVIENVMKRLGKEVQYKKISYKAA 239
>gi|312958619|ref|ZP_07773139.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens WH6]
gi|311287162|gb|EFQ65723.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens WH6]
Length = 311
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 37/271 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN----- 127
+VLI +GG IG +L LL +G+ V ++ + G + + P
Sbjct: 7 RVLI----TGGAGFIGSHLVDALLANGYAVRVLDNLSTGKRGNLALDNPRVELIEGDVAD 62
Query: 128 -EIVS--AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
E+V+ A G A V +V V D + + N V + + +GVK+ ++
Sbjct: 63 AELVARAAVGAMAVVHLAAVASVQASV--DDPVSTHQSNFVGTLNVCEAMRKAGVKRVVY 120
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS-------- 236
SSA +Y E ++ + K +K E++ ++ +R Q+ +
Sbjct: 121 ASSAAVYGNNGEGASIDEETTKAPLTPYASDKLAGEHYFDF--YRRQHALEPVIFRFFNI 178
Query: 237 -GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
G +D F +R + P+ + G G Q + +V DL +L A+E P+A
Sbjct: 179 FGPRQDPSSPYSGVISIFCERARQGLPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAPDAP 238
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAG-LPV 318
I N+ +R TL + + A G LPV
Sbjct: 239 LGAI-NVGWNRTTTLKQVLQALEDALGALPV 268
>gi|302531552|ref|ZP_07283894.1| predicted protein [Streptomyces sp. AA4]
gi|302440447|gb|EFL12263.1| predicted protein [Streptomyces sp. AA4]
Length = 309
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 225
A GV++ +F SSA +Y ++ P E D + P AG + Y +W
Sbjct: 109 AADEGVERLVFASSASVYGEPEKLPMHEDDKLNPLTPYCISKRAGEDLLGFYERTKGLSW 168
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G G + F R+ +P I G+G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGAGDQSMDFVHVTDLAKGVVA 228
Query: 281 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVE 319
A+E+ + SN+ N+ + ++ +AK+ +A G+ VE
Sbjct: 229 ALESEQ---SNLPINIGTGIDTSIATLAKILIEAVGVDVE 265
>gi|33599116|ref|NP_886676.1| UDP-glucose 4-epimerase [Bordetella bronchiseptica RB50]
gi|33575162|emb|CAE30625.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica RB50]
Length = 307
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ- 213
V + + +D+ V D+ G + ++ SS+ +Y D E ++ G+V
Sbjct: 86 VAIAQTNRRIDST--VIDFCHEIGAR-LVYCSSSSVYGRLDSTAVAESRALERATGYVAE 142
Query: 214 ---VEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
E I++ ++A+ R G G + F +R ++ P+ G+G + +
Sbjct: 143 KIWAEGEIAKRLPSYATLRLCAPYGPGQKTRTVLRIFIERALQGAPILYFGTGSREQDFV 202
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
HV+D+++ + A++ P + +FN+ R +T+ + L ++
Sbjct: 203 HVKDIAAAVVAALDRPTV--NGVFNISGGRPITMRELGMLVSR 243
>gi|440685361|ref|YP_007160153.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
gi|428682621|gb|AFZ61383.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
Length = 317
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F DR K+P+ I G G V DL+ LA++ + A++ ++NL R VTL
Sbjct: 180 FLDRAFTKQPLTIFGDGSASRKFVFVEDLAQAHVLALQ--DIAANQVYNLEGMRFVTLKE 237
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAG--------IDAKKAF 336
+A+L ++ I YDP G I A KA+
Sbjct: 238 LAELVSKLVDEVDIIYQYDPSRRGELDNYRKIISANKAY 276
>gi|38234000|ref|NP_939767.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae NCTC 13129]
gi|38605712|sp|P33119.2|GALE_CORDI RecName: Full=UDP-glucose 4-epimerase; AltName:
Full=Galactowaldenase; AltName: Full=UDP-galactose
4-epimerase
gi|38200262|emb|CAE49946.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae]
Length = 328
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 111/291 (38%), Gaps = 62/291 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G + LL GHEVTI +T G+ ++ V G V GD
Sbjct: 6 TGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDA--------------VPLGATFVEGD 51
Query: 141 PAEVG-NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFL 183
+V NV+ +FD VL + N+ + D K + V+ +
Sbjct: 52 IKDVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E P + + I +++A S R + G
Sbjct: 112 FSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVRDLSSMLTL 280
+ G N++ E +++ + + + G G + H+RDL+ L
Sbjct: 172 AYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHIL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAG 329
A+++ S IFNL S ++ + C + G +P E+ P+ AG
Sbjct: 232 ALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVA---PRRAG 279
>gi|229161934|ref|ZP_04289911.1| NAD-dependent epimerase/dehydratase [Bacillus cereus R309803]
gi|228621541|gb|EEK78390.1| NAD-dependent epimerase/dehydratase [Bacillus cereus R309803]
Length = 345
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 47/289 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------THKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R V + A +K ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGE-ALHDNIKHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVE----------------KYISENFSN--W----ASFRPQY 232
P H++ D +++P+ Q++ K + E + W R
Sbjct: 103 -PHHIKEDYILQPEPTGDQIKAVENGEVSPYEYYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN A + N+
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGEVLVPGRKDRPVQIVDIKDVANWGLNMAENNRAGTFNV 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ +T++ + C + A V D + ++ K P+ M
Sbjct: 222 TG--PNYELTMEELLNTCKKVANSDAAFVWVD--ESFLNEHKVQPWTEM 266
>gi|376284924|ref|YP_005158134.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae 31A]
gi|376290622|ref|YP_005162869.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae C7 (beta)]
gi|376293424|ref|YP_005165098.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae HC02]
gi|144973|gb|AAA23297.1| ORF3 [Corynebacterium diphtheriae]
gi|144977|gb|AAA23300.1| open reading frame [Corynebacterium diphtheriae PW8]
gi|371578439|gb|AEX42107.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae 31A]
gi|372104018|gb|AEX67615.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae C7 (beta)]
gi|372110747|gb|AEX76807.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae HC02]
Length = 328
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 105/278 (37%), Gaps = 57/278 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G + LL GHEVTI +T G+ ++ V G V GD
Sbjct: 6 TGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDA--------------VPLGATFVEGD 51
Query: 141 PAEVG-NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFL 183
+V NV+ +FD VL + N+ + D K + V+ +
Sbjct: 52 IKDVAENVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E P + + I +++A S R + G
Sbjct: 112 FSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVRDLSSMLTL 280
+ G N++ E +++ + + + G G + H+RDL+ L
Sbjct: 172 AYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHIL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
A+++ S IFNL S ++ + C + G P+
Sbjct: 232 ALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHPI 269
>gi|392564334|gb|EIW57512.1| NAD-P-binding protein [Trametes versicolor FP-101664 SS1]
Length = 304
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 36/269 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVLI+ G IG +A+ + +GH V T ++ K K+ IV+
Sbjct: 2 KVLII----GATGFIGLPIAQAFVRAGHIVYGQT---RSAAKAKRLAAEEIIPIVADVAD 54
Query: 136 TVWGDPA-----EVGNVVGGV----TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
T P + + VGG T D++L + A RP + +I
Sbjct: 55 TAAYLPIGATLDAIIDAVGGSDIKDTSDLLLRATAAAVHAHRPAL-------APKLTYIW 107
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHV---------QVEKYISENFSNWASFRPQYMIGSG 237
++G + D V D PD Q ++ I+ N RP + G
Sbjct: 108 TSGTWIHGDNRTEVVSDSTAPDTERAPALTSWRAAQEQRVIASTDVNGLVIRPSLLYGRS 167
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGS-GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ FF+R R+ V PG+ G + I H DL+ + LA E + IF+
Sbjct: 168 GSLFAR--FFERAAREGVVAWPGTPGGRLATI-HTDDLAKLYVLATEKAAVSKGQIFDGT 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
+D + D + + +G +++P
Sbjct: 225 NDVTESTDLFLQRLVEVSGAKAPYQYFEP 253
>gi|408490891|ref|YP_006867260.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
gi|408468166|gb|AFU68510.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
Length = 245
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 170 VADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAGHVQVEK 216
+ D A S+ K+F+F+ S+ IY K A +P P E + AG + E
Sbjct: 20 LIDTAHSTEAKKFIFLGSSCIYPKLAPQPLKKEYLLTGSLEPTTEWYAIAKIAGVMACEA 79
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPGSGMQFT 266
+ ++ S P + G +N D + ++RK PV + GSG
Sbjct: 80 IRKQYGRDFVSLMPTNLYGPNDNFDLKTSHVLPAMIRKFHEAKLNNNEPVELWGSGTPIR 139
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
HV D++ + A+EN +++N+ + + +T+ +A+ + G EIV K
Sbjct: 140 EFLHVDDMADAVVFALEN--KLPEHLYNIGTGKDLTIKELAETIQKVVGHNGEIVWDSSK 197
Query: 327 AAGIDAK 333
G K
Sbjct: 198 PDGTPRK 204
>gi|227354754|ref|ZP_03839172.1| UDP-N-acetylglucosamine 4-epimerase [Proteus mirabilis ATCC 29906]
gi|227165197|gb|EEI50025.1| UDP-N-acetylglucosamine 4-epimerase [Proteus mirabilis ATCC 29906]
gi|302378450|gb|ADL32285.1| Gne [Proteus mirabilis]
Length = 316
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV--------VKPDAGHVQV 214
N+D + + D A+ +K +F SS +Y ++ +G+ K +A H
Sbjct: 83 NVDGAKNICDVAEQLNIKHIVFTSSVAVYGFVEKETGEDGEFHPFNDYGKSKLEAEHKYE 142
Query: 215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
Y +N + RP + G GN + F R + + GSG ++A+V ++
Sbjct: 143 TWYKKDNTNTLVVIRPTVVFGEGNRGNVYNLF--RQIASGKFLMVGSGNNKKSMAYVENI 200
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
++ L A + + +IFN + T++ + + A
Sbjct: 201 AAFLKFATQIE--SGHHIFNYIDKPDFTMNELTDIIYTA 237
>gi|365161440|ref|ZP_09357585.1| hypothetical protein HMPREF1014_03048 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363620889|gb|EHL72135.1| hypothetical protein HMPREF1014_03048 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 360
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++ G +
Sbjct: 21 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEVFPEVEQLI--GDR 68
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 69 N--GDVSSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 119
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 120 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 179
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 180 LLSGMFDYTDRLPYWIGRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 239
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 240 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|421484565|ref|ZP_15932133.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
gi|400197060|gb|EJO30028.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
Length = 320
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 30/273 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYP-HVLTRTRAELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG 202
VG ++ V D KNL V A ++GV++ LF+ S+ IY + A +P +
Sbjct: 68 VGGILANQNHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIYPREAAQPLREDA 125
Query: 203 DVVKP------------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDR 249
+ P AG E Y E + + P + G +N D
Sbjct: 126 LLTGPLESTNEPYAIAKIAGLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLPA 185
Query: 250 IVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
++RK V I G+G +V DL+ +E+P+A I+N+ + +
Sbjct: 186 LIRKFHEGRESGQESVTIWGTGTPLREFLYVDDLAQACVTLMEHPDA--EGIYNIGAGKD 243
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A L A+ G IV+ K G K
Sbjct: 244 ISIADLAALVARVVGYHGRIVYDTTKPDGTPRK 276
>gi|304309668|ref|YP_003809266.1| epimerase [gamma proteobacterium HdN1]
gi|301795401|emb|CBL43599.1| putative epimerase [gamma proteobacterium HdN1]
Length = 305
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 44/230 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G +IG Y+ + LL +G V + +D + K F K DPA
Sbjct: 11 TGASGMIGVYICRSLLAAGASVIGVVRNPAKADFLAKEGVT-FR-------KADLNDPAA 62
Query: 144 V-------GNVVGGVTFDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAG 189
+ VV +V + G NLD R V + A+S+GVK+ + IS+ G
Sbjct: 63 LTAAFQGCDAVVANAALYIVQKSMGAWDAHEKANLDGTRNVMEAAQSAGVKRIVQISTFG 122
Query: 190 IYK------PADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFRPQYMI 234
IY+ +E P + G K G + K SE + + + RP +
Sbjct: 123 IYRWSVLRTLTEESPQLNG--AKRQGGAYRATKQTSEALAWNLAQQLKLDLTTLRPTAVY 180
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
G+ +N +C + +++R +P+P ++F + + D++ +T A+ N
Sbjct: 181 GARDN-NCLRPIY-QLLRAPLLPMP--SIRFP-VVYAGDVADAVTGALAN 225
>gi|425466590|ref|ZP_18845888.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9809]
gi|389830855|emb|CCI26862.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9809]
Length = 326
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALINLAKDSNMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVE 283
RP + G GN + DR+++ KR +P+P + ++ + V +L + ++
Sbjct: 165 ILRPTLVYGLGNRAN-----MDRLMKLIKRGLPLPFAAIKNRRSFVFVGNLVDAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|291440060|ref|ZP_06579450.1| reductase [Streptomyces ghanaensis ATCC 14672]
gi|291342955|gb|EFE69911.1| reductase [Streptomyces ghanaensis ATCC 14672]
Length = 345
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 111/286 (38%), Gaps = 49/286 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVS 131
+ +++ T+ G AV+ + LG +VT+ G + + PP R +
Sbjct: 2 RLLMLGGTDFAGRAVV-----EAALGRDWDVTVFHRG-----RHEAPPGARTLRGDRTAP 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK--SSGVKQFLFISSAG 189
G + DP E +DVV+D DA R V D A+ +++++SS
Sbjct: 52 DGLAALDEDPGE---------WDVVVDTWS---DAPRAVRDSARLLRGRAGRYVYVSSCS 99
Query: 190 IYKPA------DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF--------RPQYMIG 235
+Y A ++ P VEG D +K E + SF R ++G
Sbjct: 100 VYAWAPPAGYTEQAPLVEGASADADRTEYARDKRGGE-LAVLGSFGADRSVLVRAGLILG 158
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
N W+ R+ R PV PG RDL+ + A S +NL
Sbjct: 159 PYENVGRLPWWLTRMARGGPVLAPGPRDLPLQYVDARDLAEWILDAAGQ---ELSGPYNL 215
Query: 296 VSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPKA---AGIDAKKAFP 337
+S + T+ G+ + CA+ G E+ DP+ AGI+ P
Sbjct: 216 MSPQGHTTMGGLLEACAEVTGGTAELRWTDPEVVLEAGIEPWTELP 261
>gi|148262267|ref|YP_001228973.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146395767|gb|ABQ24400.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 296
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMT--VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP 141
SGG +G +L + LL GH + ++ GD D ++ + AG + G
Sbjct: 6 SGGTGFVGGHLRRALLEKGHRIRLLAHKRGDGFEDGIEVVEGDVTRPDTFAG--QLAGCE 63
Query: 142 AEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
A + N+VG G+TF+ +L + A R + D AK +G+K++L +S+ G
Sbjct: 64 AAI-NLVGIIREFPAQGITFEKLL------VQATRNMVDAAKGAGIKRYLHMSALGTRPN 116
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI--- 250
A H E+Y+ + ++ FRP + G ++ F +++
Sbjct: 117 ATSAYH---------RSKFLAEEYVRASGLDYTIFRPSIIFGPKDD------FINKLAGY 161
Query: 251 VRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
++ P VP+ G G D++ +++E PE
Sbjct: 162 IKGYPAVPVIGDGKYRLQPIAADDVARCFAMSLEMPETVGKT 203
>gi|374595736|ref|ZP_09668740.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
gi|373870375|gb|EHQ02373.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
Length = 316
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVE---GDVVKPDAGHVQVEKY 217
+NL + D A + V++F+F+ S+ IY K A +P E D ++P + K
Sbjct: 83 ENLQIQNNLIDTAHKAEVEKFIFLGSSCIYPKLAPQPLKEEYLLTDSLEPTNEWYAIAKI 142
Query: 218 --------ISENF-SNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 258
I + F ++ S P + GS +N D E ++RK PV +
Sbjct: 143 AGVKACEAIRKQFGKDFVSLMPTNLYGSRDNFDLETSHVLPAMIRKFQDAKVNGNVPVEL 202
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
GSG HV D++ + A+EN PE +++N+ + + +T+ +A+ + G
Sbjct: 203 WGSGTPMREFLHVDDMADAVVFALENKLPE----HLYNIGTGKDLTIKELAETIQEITGH 258
Query: 317 PVEIVHYDPKAAG 329
EI+ + K G
Sbjct: 259 NGEIIWDNSKPDG 271
>gi|448733375|ref|ZP_21715620.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
gi|445803109|gb|EMA53409.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
Length = 366
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE----GDVVKPDAGHVQVEKYI 218
+D R V AK GV + +++SS +Y D P E V ++ EK I
Sbjct: 102 TIDGTRNVLWAAKEEGVDRVVYVSSTAVYGTHDSHPITEESPLDGVGAYGEAKIEAEK-I 160
Query: 219 SENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
E+F RP+ IG + FD I VP+ G G + HV DL
Sbjct: 161 CEDFRRMGMCVPILRPKTFIGP-QRLGVFQVLFDWIESGANVPMVGWGNNKYQLMHVYDL 219
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ + EA + +FN+ +D T+
Sbjct: 220 VRAMEFMIAKDEADVNTVFNVGADEFGTM 248
>gi|34497488|ref|NP_901703.1| NADH-ubiquinone oxidoreductase [Chromobacterium violaceum ATCC
12472]
gi|34103343|gb|AAQ59705.1| probable NADH-ubiquinone oxidoreductase [Chromobacterium violaceum
ATCC 12472]
Length = 313
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF--NEIVSAGGKTVWGDPA 142
GG IG +LA +L GH +TI S + P F E+VSA DP
Sbjct: 10 GGSGFIGRHLAAQLASRGHRITI------ASRRTGLPDFRVLPSAELVSADIH----DPG 59
Query: 143 EVGNVVGG----VTFDVVLDNNGKNLDAVRP-----VADWAKSSGVKQFLFISSAGIYKP 193
++ ++ G V+ +L + + + D + GV++ + +S+ G +
Sbjct: 60 QLAGLIAGHDAVVSMVGILHGSRAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQ- 118
Query: 194 ADEPPHVEGDVVKPDA-GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
D P D + A G + VE + +W RP + G G D F + +
Sbjct: 119 -DAP----SDYQQTKALGELAVE----SSGLDWTILRPSVVFGHG---DAFLNMFAGLQK 166
Query: 253 KRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+ PV P+ G+G + + V D++ + + E + +L TL +A+L
Sbjct: 167 RLPVLPLAGAGCKMAPV-WVEDVARAVCECLARKETEGRKL-DLAGPETYTLAQLARLAG 224
Query: 312 QAAGLP 317
+A+G P
Sbjct: 225 RASGHP 230
>gi|51891542|ref|YP_074233.1| NADH-ubiquinone oxidoreductase [Symbiobacterium thermophilum IAM
14863]
gi|51855231|dbj|BAD39389.1| putative NADH-ubiquinone oxidoreductase [Symbiobacterium
thermophilum IAM 14863]
Length = 303
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 37/255 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG Y+ + L GH V +M+ D + + P V AG T D A
Sbjct: 7 AGGTGFIGSYIVRRLTQDGHRVIVMSR-DPGKARGRVPD----GVEVRAGDVT---DGAT 58
Query: 144 VGNVVGGVTFDVV--------LDNNGKNLDAVR-------PVADWAKSSGVKQFLFISSA 188
+G + G V ++N + +R + A+ +GV +F++IS A
Sbjct: 59 LGPALAGAEIVVCAVQFPNHPVENPRRGHTYIRVDGEGTVRLVGAARKAGVSRFVYISGA 118
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
G EG + EK I E+ + FRP ++ G + + F
Sbjct: 119 GTR---------EGQTKPWFRAKLMAEKAIRESGIPYTIFRPSWVYGPEDRSLNKFATFA 169
Query: 249 RIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
R++ P VP+ GSG +V DL+ + ++ AA + +++ + +T+D +
Sbjct: 170 RLL---PFVPVIGSGRTRVQPLYVEDLADAVAASLRT-GAALNRTYDIGGPQELTMDEII 225
Query: 308 KLCAQAAGLPVEIVH 322
+ G ++H
Sbjct: 226 RTMLWVMGRRRPLLH 240
>gi|170758224|ref|YP_001787997.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum A3 str.
Loch Maree]
gi|169405213|gb|ACA53624.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 305
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 110/279 (39%), Gaps = 46/279 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG IG L +L+ G++V I+ + N + + K N+I+ +
Sbjct: 6 TGGAGFIGSNLVDKLISMGNDVCIIDNLSTGNINNINKKARLYINDILDSN--------- 56
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-----------------GVKQFLFI 185
+ N+ FD+V + +D + + D S GVK+ ++
Sbjct: 57 -ISNIFKKEKFDIVY-HFAAQIDVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYP 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFRPQYMIGS 236
SSA IY + P E VKP + + + KY E + ++ FR + G
Sbjct: 115 SSAAIYGQPEYLPIDEKHRVKPISSY-GLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173
Query: 237 GNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ E F DR+ + P+ I G G + +V D+ A+ N S N+
Sbjct: 174 RQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVDANIAALCN---GSRNL 230
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
FN+ + T+ +A++ A + I + + + I+
Sbjct: 231 FNIGTGVYTTVKDLAQMMINAMKVQSHIEYKEARKGDIE 269
>gi|254444061|ref|ZP_05057537.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
gi|198258369|gb|EDY82677.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
Length = 324
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 20/188 (10%)
Query: 146 NVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD 203
+V+G V +D V+D + + + R + + + +Q++FISSA Y KP + E
Sbjct: 40 SVLGSVIWDAVVDFTAFSTEDIDRRIELFGGKT--RQYIFISSASAYQKPIQDYIITEST 97
Query: 204 -VVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSGNNK-DCEEWF-----FD 248
+V P + + + E + RP G W D
Sbjct: 98 PLVNPFWDYSRNKAACEEKLLDAVRSARLPATVVRPSLTFGDTQAPLALNSWLKPYTAID 157
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+ + + V +PG G + H D + L + N EAA + F++ SD +T D + +
Sbjct: 158 RMRKGKSVIVPGDGTSLWTVTHNSDFAKGLVGLLGN-EAAVGHAFHITSDEVLTWDQIYR 216
Query: 309 LCAQAAGL 316
AQAAG+
Sbjct: 217 YTAQAAGV 224
>gi|312143250|ref|YP_003994696.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
gi|311903901|gb|ADQ14342.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
Length = 329
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPA-----DEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP DE P+ E K ++ + +Y F
Sbjct: 90 TEQYIFISSASAYQKPQSSYLIDESTPLANPYWEYSQNKIACENLLMAEYRRNGFPV-TI 148
Query: 228 FRPQYMIG-----SGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + G + N W DR+ R++ + + G G + H D +
Sbjct: 149 VRPSHTYGYRSIPAALNSSKAPWSLIDRMRRRKKILVHGDGSSLWTMTHNTDFARAFLPL 208
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ N +A + F + SD ++ + + KL A+AAG+ +E++H
Sbjct: 209 MGNIQAIG-HAFQITSDESLNWNQIFKLIAKAAGVEIELLH 248
>gi|337290935|ref|YP_004629956.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans BR-AD22]
gi|334699241|gb|AEG84037.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans BR-AD22]
Length = 327
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D NR E V AG V GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV-------DNFSTG--NR--EAVPAGASLVEGDIRD 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
N ++ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KANEILASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRTNNVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAHAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + + G G + H+RDL+ LA+E
Sbjct: 175 DIGENREVETHLIPLILQVALGHRDKILMFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + + C G P+
Sbjct: 235 SNQPGVHRIFNLGSGEGFSVKQVIEACRTVTGHPI 269
>gi|404398224|ref|ZP_10989808.1| UDP-glucose 4-epimerase [Pseudomonas fuscovaginae UPB0736]
Length = 309
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
V + + +GVK+ LF SSA +Y E + D K +K SE + ++ +R
Sbjct: 104 VCEAMRQAGVKRVLFASSAAVYGNNGEGESIVEDTPKAPLTPYASDKLASEYYFDF--YR 161
Query: 230 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 162 RQHGLEPVIFRFFNVFGPRQDPSSPYSGVISIFSERAEKGLPITVFGDGEQTRDFIYVGD 221
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
L +L A+E P A I N+ +R+ TL M + ++ G P+ V+Y +G
Sbjct: 222 LVDVLVQALEAPRAEEGAI-NVGLNRSTTLKQMLQALSEVVG-PLPPVNYAAARSG 275
>gi|384515847|ref|YP_005710939.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans 809]
gi|334697048|gb|AEG81845.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans 809]
Length = 327
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D NR E V AG V GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV-------DNFSTG--NR--EAVPAGATLVEGDIRD 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
N ++ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KANEILASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRTNNVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAHAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + + G G + H+RDL+ LA+E
Sbjct: 175 DIGENREVETHLIPLILQVALGHRDKILMFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ + IFNL S ++ + + C G P+
Sbjct: 235 SNQPGVHRIFNLGSGEGFSVKQVIEACRTVTGHPI 269
>gi|421616552|ref|ZP_16057557.1| epimerase [Pseudomonas stutzeri KOS6]
gi|409781504|gb|EKN61100.1| epimerase [Pseudomonas stutzeri KOS6]
Length = 300
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL + + + +GV++ LF SSA +Y E ++ D K +K SE++
Sbjct: 96 NLIGTLNLCEAMREAGVRRVLFASSAAVYGNNGEGLAIDEDTPKAPLTPYAADKLASEHY 155
Query: 223 SNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT 266
++ +R Q+ + G +D F +R ++ P+ + G G Q
Sbjct: 156 LDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKRLPIAVFGDGEQTR 213
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ +V DL +L A+E+PE A + N+ ++A +L+ + + + G
Sbjct: 214 DFVYVGDLVEVLVQALESPEVAEGAV-NVGLNQATSLNQLLEAISDVLG 261
>gi|421599369|ref|ZP_16042592.1| dTDP-glucose-4,6 dehydratase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404268528|gb|EJZ32985.1| dTDP-glucose-4,6 dehydratase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 164
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G L +LL +GH+VT++ + GD+ + + P R K D
Sbjct: 3 TGGAGYVGSVLVPQLLAAGHKVTVLDLFMYGDDVFNAFRDNPNLRLI-------KGDIRD 55
Query: 141 PAEVGNVVGG---VTFDVVLDNN---------GK--NLDAVRPVADWAKSSGVKQFLFIS 186
A + + G V + N+ GK N D RP+ AK +G+K+F++ S
Sbjct: 56 EAAINEALRGNNAVIHLACISNDPSFELDPGLGKSINYDCFRPMVRAAKKAGIKRFIYAS 115
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
S+ +Y DE E +P + + + + ++ A+
Sbjct: 116 SSSVYGIKDEAEVTEELSCEPLTDYSKFKAMCETDLADEAA 156
>gi|223936838|ref|ZP_03628747.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223894407|gb|EEF60859.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 303
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 40/258 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLI+ G +G L EL+ GHEV + E ++K +AG +
Sbjct: 2 RVLIL-----GCGYVGLPLGAELVRQGHEVFGLRRSAEGEAEVK-----------AAGIQ 45
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKN---------LDAVRPVADWAKSSGVKQFL 183
++ GD ++ + G + V + ++ K L R + DW + K+F+
Sbjct: 46 SLAGDITKREDLARIPGPFDWVVNMVSSTKGGVEEYQQVYLQGTRNLIDWLALTPPKKFV 105
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFR--PQYMIGSG 237
+ SS +Y D E V+P + V+ EK + E A R P ++
Sbjct: 106 YTSSTSVYGQTDGSSVKETSPVEPSSETSKVLVETEKVLMEA----AQLRKLPAVILRVA 161
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
E + K I G G + N+ H DL ++ A++N S ++N+V
Sbjct: 162 GIYGPERGHLFQQYLKNEARIAGKGERIINMIHRDDLVGIIIAALKN--GRSGEVYNVVD 219
Query: 298 DRAVTLDGMAKLCAQAAG 315
D VT + A+A G
Sbjct: 220 DEPVTQLHFFQWLAEALG 237
>gi|407707916|ref|YP_006831501.1| 50S ribosomal protein L22 [Bacillus thuringiensis MC28]
gi|407385601|gb|AFU16102.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis MC28]
Length = 314
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPF 123
+K + KKVL++ GG G +L + LL +GH+VTI T G D +K+
Sbjct: 18 MKTGMMKVKKVLVL----GGTRFFGKHLVEVLLQAGHDVTIATRGVTKDSFGSAVKRIIV 73
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+R D E+ + G ++D+V DN + +A + + K K+++
Sbjct: 74 DR-------------EDEKELAKRLEGKSYDIVYDNLCYSSNAAKRACEVLKGK-TKKYI 119
Query: 184 FISSAGIYKPA 194
SS +Y+PA
Sbjct: 120 MTSSMAVYEPA 130
>gi|336253299|ref|YP_004596406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335337288|gb|AEH36527.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 297
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 110/281 (39%), Gaps = 48/281 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--------PFNRFN 127
KVL+ +GG IG L EL GHEVT ++ N D+ P + ++
Sbjct: 2 KVLV----AGGTGFIGTNLCTELAERGHEVTALS---RNPDRNGLPDDVDLEMGDVSAYD 54
Query: 128 EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK---NLDAVRPVADWAKSSGVKQFLF 184
I A V G A V N+V D + +L + A+ GV ++L
Sbjct: 55 SIEGA----VAGHDAVV-NLVALSPLYQASDPGAQERVHLGGTENLVRAAEDHGVDRYLQ 109
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE 244
IS+ G P + H+ + EK ++++ W RP + G G
Sbjct: 110 ISALGA-DPDSDIDHIR--------AKGKAEKVVTDSDLEWTIVRPSIVFGDGGE----- 155
Query: 245 WFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F ++ P +PG G V DL ML A+E+ +A + I+ L +
Sbjct: 156 --FVDFTKQLTTPYVTGLPGGGETRFQPIWVGDLVPMLADAIED-DAHAGEIYELGGPQV 212
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKA---AGIDAKKAFPF 338
VTL +L A G V IV P A G+ A A PF
Sbjct: 213 VTLADATELVYAAEGKDVTIVPV-PMALTKLGLAAVDAVPF 252
>gi|170719740|ref|YP_001747428.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619]
gi|169757743|gb|ACA71059.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619]
Length = 310
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 32/259 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V ++ + G ++ ++ P V+ A
Sbjct: 9 TGGAGFIGSHLCDALLAKGYAVRVLDDLSTGKRDNLQLGNPRLELVEGDVADAALVQRAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V V + N V + + GV++ +F SSA +Y
Sbjct: 69 AGCSAVVHLAAVASVQASVEDPV--KTHQSNFIGTLNVCEAMRLQGVRRVVFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGQSIAEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFSERATQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGMAKLCAQAAG 315
++A +L+ + K G
Sbjct: 244 LNQATSLNQLLKALETVVG 262
>gi|89069787|ref|ZP_01157122.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus
HTCC2516]
gi|89044588|gb|EAR50704.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus
HTCC2516]
Length = 283
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQV--EKYI 218
N++ + + A+ +GV+ +F+SS +Y P P E +PD G V++ E+ +
Sbjct: 85 NVEGTAALFEAARKAGVEAAVFLSSRAVYGPV-AGPLTETAECRPDTLYGEVKLAGEQAL 143
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
+ + AS R + G+ +W F R + P G + H RDL++
Sbjct: 144 AASGLRGASLRATGVYGAPGPGLAHKWEDLFAAFARGEEI-APRIGTEV----HGRDLAA 198
Query: 277 MLTLAVENPEAASS-NIFNLVSDRAVTLDGMAKLCAQAAGLP 317
+ LA+E P AA N+ +L+ DRA L A++ A +P
Sbjct: 199 AVRLALERPGAAEVLNVSDLLLDRAELLALWAEVSGVAGRVP 240
>gi|49480893|ref|YP_037134.1| isoflavone reductase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49332449|gb|AAT63095.1| possible isoflavone reductase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 341
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F + +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLKVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLDMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|32471607|ref|NP_864600.1| udp-glucose 4-epimerase [Rhodopirellula baltica SH 1]
gi|32443448|emb|CAD72281.1| udp-glucose 4-epimerase [Rhodopirellula baltica SH 1]
Length = 334
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
++++ +R V +K++GV + + SS+ +Y +P + P H + + + ++
Sbjct: 113 EDINGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 221 NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHV 271
F ++ F Q+ + N + D +V K +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D T +++P A I N+ SD +T+ +A+ + G ++VH P G D
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEG-D 290
Query: 332 AKKAFP 337
+ P
Sbjct: 291 MTRRCP 296
>gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 305
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH-- 211
D LD + L V + D+ VK+F+F SSA +Y + P E ++P++ +
Sbjct: 83 DAYLDCSINVLGTVN-LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGL 141
Query: 212 --VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGS 261
+ E+YI + NF+ + FR + G + E F +R+ + V I G
Sbjct: 142 SKLTSEEYIKMFAHNFNFEYIIFRYSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGD 201
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V D++ +A+ E + S FNL + + V+++ + ++ + G V
Sbjct: 202 GTQTRDFIYVEDVAEANCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV 258
Query: 322 HYDPKAAG 329
Y PK G
Sbjct: 259 -YQPKRPG 265
>gi|238928056|ref|ZP_04659816.1| NAD dependent epimerase [Selenomonas flueggei ATCC 43531]
gi|238884016|gb|EEQ47654.1| NAD dependent epimerase [Selenomonas flueggei ATCC 43531]
Length = 326
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 26/248 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-------TVGDENSDKMKKPPFNRFNEIVSAGGKT 136
+GG IG L + +L GH V ++ T EN K F + A
Sbjct: 17 TGGAGFIGSNLCEAILSLGHRVRVLDNLSTGHTRNIENVCGNSKFEFIEGDIRDLAACHH 76
Query: 137 VWGDPAEVGNVVGGVT----FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
D V ++ V+ D +D N+ + + A GVK+F + SSA +Y
Sbjct: 77 ACQDVDYVLHLAAEVSVPESIDKPIDYTMTNIIGTVNMMEAAAKHGVKKFTYASSAAVYG 136
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-------FRPQYMIGSGNNKD---- 241
+ P E ++V V K+ +E +++ + + +Y G +D
Sbjct: 137 DDETMPKRE-EIVGRRLSTYAVTKFAAEEYAHQYTMHYGLDCYGMRYFNVYGRRQDPNGA 195
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F + ++R P I G G Q + +V D+ LA P A+ +N+ +
Sbjct: 196 YAAVIPTFIECLLRDEPPTINGDGEQSRDFVYVDDVVQANLLACAAPHEAAGEAYNVAAG 255
Query: 299 RAVTLDGM 306
+ ++L+ M
Sbjct: 256 KQLSLNEM 263
>gi|398868952|ref|ZP_10624341.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM78]
gi|398232213|gb|EJN18188.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM78]
Length = 309
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL G+ V I+ D +S K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGYSVRILD--DLSSGKRSNLPLDNPKVELIVGDVADAALVAR 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQTGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE + ++ +R ++ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLASEQYFDF--YRREHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFLYVEDLVDWLVQAIEKPQVEDGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A +L M G LP V Y P +G
Sbjct: 242 VGWNQATSLKQMLAALEMVVGKLPP--VSYGPARSG 275
>gi|219852721|ref|YP_002467153.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
gi|219546980|gb|ACL17430.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
Length = 304
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 219
N N+ V A+ GVK+ +F SS+ +Y P E P + + V K
Sbjct: 88 NEVNIGGTLNVLMAARDQGVKKIMFASSSSVYGDTPTLPKRESMTPAPMSPYA-VTKLTG 146
Query: 220 ENFSN-WASFRP------QYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQF 265
E++ N ++S +Y G +D + F +I+ I G G Q
Sbjct: 147 EHYFNVFSSLYGLKMTCLRYFNVFGPRQDPKSQYAAVIPNFITKILNHESPIIHGDGEQT 206
Query: 266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
+ +RD+ LA+ E++S IFN+ DR V+L+ +A + G E+++ P
Sbjct: 207 RDFTFIRDVVHANILAM---ESSSEGIFNIACDRRVSLNVLADQIMEIIGERRELIYDAP 263
Query: 326 KAAGI 330
++ +
Sbjct: 264 RSGDV 268
>gi|407647098|ref|YP_006810857.1| UDP-glucose 4-epimerase [Nocardia brasiliensis ATCC 700358]
gi|407309982|gb|AFU03883.1| UDP-glucose 4-epimerase [Nocardia brasiliensis ATCC 700358]
Length = 326
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 53/276 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG +G A+ LL +GHEV ++ + N+D + P RF E GD A
Sbjct: 6 TGGAGYVGGVCAQVLLEAGHEVVVVDDLSTGNADGV--PTAARFVE----------GDVA 53
Query: 143 EVGNVVGGV-TFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFI 185
+ + TFD VL ++L +P W + +G + +F
Sbjct: 54 QAAPALLAAETFDGVLHFAAQSLVGESVQQPEKYWHGNVVKTFELLEAMRHTGTPRLVFS 113
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS- 236
S+A +Y ++ P E +P + + I +++A S R + G+
Sbjct: 114 STAAVYGEPEQVPITEDAPTRPTNPYGASKLAIDHAITSYAIAHGLAATSLRYFNVAGAY 173
Query: 237 ---GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAV 282
G N+ E +++ ++ + + G+ G + H+RDL+ LA+
Sbjct: 174 GGLGENRVVETHLIPLVLQVALGHRKAISVFGTDWPTPDGTAVRDYIHIRDLAQAHLLAL 233
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ EA + ++NL S ++ + C + GLP+
Sbjct: 234 TSSEAGTHRVYNLGSGTGFSVREVISACERVTGLPI 269
>gi|386010162|ref|YP_005928439.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida BIRD-1]
gi|313496868|gb|ADR58234.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida BIRD-1]
Length = 310
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 32/259 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + G+++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGLRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGMAKLCAQAAG 315
++A +L+ + + G
Sbjct: 244 LNQATSLNQLLAALGKVVG 262
>gi|425440103|ref|ZP_18820411.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9717]
gi|389719541|emb|CCH96644.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9717]
Length = 326
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 226
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSSCHPDSPYGRSKLQAEQALINLAKDSNMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|374576251|ref|ZP_09649347.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
gi|374424572|gb|EHR04105.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
Length = 333
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G L +LL +GH+VT++ + G++ D ++ P R K D
Sbjct: 11 TGGAGYVGSVLVPQLLAAGHKVTVLDLFMYGEDVFDGVRNNPDLRLI-------KGDIRD 63
Query: 141 PAEVGNVVGG---VTFDVVLDNN---------GK--NLDAVRPVADWAKSSGVKQFLFIS 186
A + + G V + N+ GK N D RP+ AK +G+K+F++ S
Sbjct: 64 EAAINGALRGNNAVIHLACISNDPSFELDPGLGKSINYDCFRPMVRAAKKAGIKRFIYAS 123
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
S+ +Y DE E +P + + + + ++ A+
Sbjct: 124 SSSVYGIKDEAEVTENLSCEPLTDYSKFKAMCETDLADEAA 164
>gi|340355317|ref|ZP_08678005.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
gi|339622514|gb|EGQ27033.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
Length = 314
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 142 AEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPA 194
A+VG ++ + D + DN L V D A+ GVK+ LF+ S IY +P
Sbjct: 65 AKVGGILANTMYPGDFLYDN----LMIQSNVIDAARRYGVKKLLFLGSTCIYPKFAPQPL 120
Query: 195 DEPPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE--- 243
E + GD+ + AG Y ++ +N+ S P + G +N D E
Sbjct: 121 KESYLLTGDLEPTNEPYALAKIAGIKLCTAYNNQYGTNFMSVMPTNLYGPNDNFDLETSH 180
Query: 244 ------EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NL 295
+ V+ P + I G+G + HV DL++ +E A F N+
Sbjct: 181 VLPSLMRKIHEAKVQDEPTITILGTGSPLRDFLHVDDLAAACVYLMERYAAEEIGEFVNI 240
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+ +T+ +A+ + G ++V K G K
Sbjct: 241 GTGNEITIKALAEKLCEVIGYEGQLVFDSTKPDGTPRK 278
>gi|226334858|ref|YP_002784530.1| putative nucleotide-sugar epimerase [Rhodococcus opacus B4]
gi|226246078|dbj|BAH56178.1| putative nucleotide-sugar epimerase [Rhodococcus opacus B4]
Length = 320
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 45/272 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKP-----PFNRFNEIVSAGGKTV 137
+G IG LA+ L+ G EV + ++ D +KK P +RF E V T+
Sbjct: 6 TGVAGFIGSTLARRLISEGIEVRGVDSLTDYYDPDLKKSNLASIPKSRF-EFVEGDLNTL 64
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSG-- 178
E+ +++ GV F V G+ N+ A + + + K+ G
Sbjct: 65 -----ELSDLLRGVEF--VFHQAGQPGVRKSWGSEFDLYALDNVQATQRLLEAVKTDGSR 117
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFR 229
+K+ ++ SS+ +Y A + P VE D +P + + V K +E+ + S R
Sbjct: 118 IKKLVYASSSSVYGNALQYPTVESDTPRPLSPY-GVTKLAAEHLCSLYGENFGIPTVSLR 176
Query: 230 PQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G G D FF +++ + + G+G Q + ++ D+ +A +
Sbjct: 177 YFTVYGPGQRPDMAFTRFFRAVLQGDSIEVYGTGDQIRDFTYIDDIVEA-NIAAAFSDVP 235
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
++++N+ +V+L+ K+ PVEI
Sbjct: 236 PASVYNVAGGSSVSLNETIKIIGDITKRPVEI 267
>gi|442318653|ref|YP_007358674.1| hypothetical protein MYSTI_01658 [Myxococcus stipitatus DSM 14675]
gi|441486295|gb|AGC42990.1| hypothetical protein MYSTI_01658 [Myxococcus stipitatus DSM 14675]
Length = 327
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 32/263 (12%)
Query: 82 TNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP 141
T +GG +G +LA+ L G VT + ++ + R V+ DP
Sbjct: 6 TGAGG--FLGVWLAQALAARGDTVTCLLRPGGDASGLSGIDHTRAEGDVT--------DP 55
Query: 142 AEVGNVVGG--VTFDVVLDNNGK--------NLDAVRPVADWAKSSGVK-QFLFISSAGI 190
A + V G V F + G N + R + D ++G + + + + S
Sbjct: 56 ASLRPAVEGQDVVFHLAGVRRGATREDFMHVNAEGTRHLCDAMVAAGHRPRMVLVGSLAA 115
Query: 191 YKPAD-EPPHVEGDVVKPDA--GHVQVE-KYISENFSNWASF---RPQYMIGSGNNKDCE 243
P+ PHVE D +P G + E + I+ ++ + RP ++G +D E
Sbjct: 116 MGPSSASRPHVEEDPFQPYEWYGESKAEAERIAFSYGDRLPVTVSRPPRILGP---RDRE 172
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL-VSDRAVT 302
F R+V+K G G + + V D+ L L E+P A F + ++
Sbjct: 173 NLTFFRLVKKGLRLELGGGPRPLTMIDVEDVVDALILQAEHPRAVGEAFFCAGPGGKTLS 232
Query: 303 LDGMAKLCAQAAGLPVEIVHYDP 325
L+G+ LCAQA GL P
Sbjct: 233 LEGVQDLCAQALGLQPRTARVSP 255
>gi|414155533|ref|ZP_11411845.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
gi|410873506|gb|EKS21441.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
Length = 325
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 96/250 (38%), Gaps = 42/250 (16%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + F + ++ AG T WG NVVG
Sbjct: 50 GDLSSIEELSQAFQEIDAVIHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-GHVQVEKYISENFSNWA 226
+ V D + VK+ +++SS IY + + D+ + DA + YI ++
Sbjct: 93 QNVLDLCREYAVKRLVYVSSPSIYAAGKD----QFDIKESDAPKENHLNNYIRSKLASEK 148
Query: 227 SF-----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
F RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 149 LFPDYPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVA 206
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A
Sbjct: 207 LAIRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGVA 262
Query: 336 FPFRNMVFIF 345
+ + +F
Sbjct: 263 YSLEGLYRLF 272
>gi|257865791|ref|ZP_05645444.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257872126|ref|ZP_05651779.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257799725|gb|EEV28777.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257806290|gb|EEV35112.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 292
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G YL + L+ G +VTI T G D D++ + F+R +E
Sbjct: 3 KKVLVL----GGTRFFGKYLVQSLIDQGLDVTIATRGNTKDSFGDQVNRIIFDRTDE--- 55
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + T++V+ DN + + + + K+++ SS Y
Sbjct: 56 ----------ESIKTALTKETYEVIYDNIAYTSNDIEIL---LRHVTPKRYIVTSSMSAY 102
Query: 192 K------------PADEPPHVEG-DVVKPDAGHVQVEKYISENFSNWAS--FRPQYMIGS 236
PA EP + G + V G VE+ +++ +S S R Y+IG+
Sbjct: 103 HELHFDLIEADFDPAKEPFRLVGSEEVDYAQGKRTVEEILTQKYSQIPSVFVRFPYVIGA 162
Query: 237 GNNKDCEEWFFDRIVRKRPVPI 258
+ ++ D +++++P+ +
Sbjct: 163 DDYTKRFTFYIDHLIKQKPMAV 184
>gi|228915817|ref|ZP_04079393.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228843798|gb|EEM88871.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 326
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + + + +N+ +D + L
Sbjct: 204 NVVDALLLCMHSQKHTLGQKYNITNDERINL 234
>gi|229193699|ref|ZP_04320642.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
gi|228589852|gb|EEK47728.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
Length = 295
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 7 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 56
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G +D+V DN + +A + + + + K+++ SS +Y
Sbjct: 57 -------EDEKQLAERLGDKIYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 108
Query: 192 KPA 194
+PA
Sbjct: 109 EPA 111
>gi|423616649|ref|ZP_17592483.1| hypothetical protein IIO_01975 [Bacillus cereus VD115]
gi|401257881|gb|EJR64076.1| hypothetical protein IIO_01975 [Bacillus cereus VD115]
Length = 343
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 47/289 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD + + +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 193 --------------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN--W----ASFRPQY 232
+D VE + P H K + E + W R
Sbjct: 103 LHHIKEDYILQPEPTSDRIKAVENGEISP-YEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S EN +A + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRVAKGGKVLVPGRKNRPVQLVDIKDVASFGLNMAENNKAGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ +T++ + C + E + D + ++ K P+ M
Sbjct: 222 TG--PNDELTMEELLNTCKKVTNSDAEFIWVD--ESFMNENKVQPWTEM 266
>gi|284029629|ref|YP_003379560.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
gi|283808922|gb|ADB30761.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
Length = 304
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 46/260 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPA 142
+GG V+G L +L+ GH+VT T + K+ E + A G + G D A
Sbjct: 6 AGGTGVLGRRLVPQLVARGHQVTATTT---TAGKLG------LLEQLGAEGVVMDGLDAA 56
Query: 143 EVGNVVGGVTFDVVLD--------NNGK----NLDAVRPVADWAKSSGVKQFLFISSAGI 190
VG V D +++ + GK N D + +S GV L + A
Sbjct: 57 SVGEAVAAARPDTIVNQMTALSTTHAGKPTLRNADRFFARTNRLRSEGVDHLLAAADATG 116
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEK-------------YISENF--SNWASFRPQYMIG 235
H + ++ G V+ E+ ++ + + A R G
Sbjct: 117 VAHVVSQGHASMNGIR-TGGWVKTEQDPLEVIPGTHAMHHLEQAVVGAGGAVLRYGGFYG 175
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G N D E +VRKR P+ G+G F + HV D +S LAVE + +FN+
Sbjct: 176 PGANDDQLE-----LVRKRLFPLVGTGTGFFSWVHVDDAASATVLAVEQK---VTGVFNI 227
Query: 296 VSDRAVTLDGMAKLCAQAAG 315
V D + A+ AG
Sbjct: 228 VDDEPAPVSAWLPYLAECAG 247
>gi|389875578|ref|YP_006373313.1| NAD-dependent epimerase/dehydratase [Tistrella mobilis
KA081020-065]
gi|388530533|gb|AFK55729.1| NAD-dependent epimerase/dehydratase [Tistrella mobilis
KA081020-065]
Length = 372
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R++ +P + G Q + HVRD++ LA+E P +FN+ S R T+ G
Sbjct: 231 FAGRLLNGQPPLVFEDGEQQRDFVHVRDVARAFRLALETP-GIGGEVFNIASGRVYTVSG 289
Query: 306 MAKLCAQA 313
+A+L A+A
Sbjct: 290 VARLLARA 297
>gi|386825519|ref|ZP_10112641.1| UDP-N-acetylglucosamine 4-epimerase [Serratia plymuthica PRI-2C]
gi|386377522|gb|EIJ18337.1| UDP-N-acetylglucosamine 4-epimerase [Serratia plymuthica PRI-2C]
Length = 318
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 32/259 (12%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS- 131
+K+KV I+ GG IG L K L + ++T+ V + S+ P +F ++
Sbjct: 2 DKRKVAII----GGSGFIGTRLVKRL-SARDDLTLTIVDKKQSEHF--PELYQFGDVTQP 54
Query: 132 -------AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
AG V AE + V ++ + N+D R V A S +KQ +F
Sbjct: 55 QTLLQPLAGCDAVINLAAEHQDNVDPISLYYQV-----NVDGARNVCMTASSLNIKQIIF 109
Query: 185 ISSAGIYKPADEPPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
SS +Y + EG K +A +V ++ + RP + G
Sbjct: 110 TSSVAVYGFVTQETGEEGRFDPFNHYGKSKLEAEYVYEAWRKADGENKLTIIRPTVVFGE 169
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
NN+ F +I R V I GSG ++A+V ++++ L A++ + AS + N V
Sbjct: 170 -NNRGNVYNLFRQIASGRFVMI-GSGNNMKSMAYVENIAARLEHALD--QQASYQVSNYV 225
Query: 297 SDRAVTLDGMAKLCAQAAG 315
T++ + + + + G
Sbjct: 226 DKPDFTMNQLVDVISSSLG 244
>gi|448577784|ref|ZP_21643219.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
gi|445726325|gb|ELZ77941.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
Length = 272
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F D+ + + G G Q + HV D+ LA EA + FN+ + ++++ G
Sbjct: 157 FRDQARSGDDITVEGDGDQTRDFVHVDDIVQANLLAATTDEAVGES-FNIGTGESISIRG 215
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+A+ +IVH DP+ ID +A
Sbjct: 216 LAETIQNVTETDSDIVHVDPREGDIDRSRA 245
>gi|1161517|emb|CAA89986.1| UDP-galactose 4-epimease [Corynebacterium glutamicum]
Length = 329
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 105/284 (36%), Gaps = 69/284 (24%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVRAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLLEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ LA+E+ EA IFNL S ++ + ++C + G P+
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPI 269
>gi|435847430|ref|YP_007309680.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
gi|433673698|gb|AGB37890.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
Length = 329
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
+ RP + G + + +++ DR+ R V +PG G + A+V D++S L + E E
Sbjct: 157 AVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGE 216
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAG 329
A + +N+ R TL+ L A VE+V P+ AAG
Sbjct: 217 AGEA--YNVGDRRLATLEETLGLIADQLDTTVEVVTAGPRELAAG 259
>gi|299134000|ref|ZP_07027193.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
gi|298590747|gb|EFI50949.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
Length = 524
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 26/174 (14%)
Query: 42 LVSISPSSFLACPAS----SRRSSVSAFTVKASAAE--KKKVLIVNTNSGGHAVIGFYLA 95
L S S ++ LAC A RS + A E + +VL++ GG IG L
Sbjct: 126 LTSFSGAALLACLARIISFVLRSEDHEISYPAEHREPDESRVLVI----GGAGYIGSALV 181
Query: 96 KELLGSGHEVTIMTV---GDENSDKMKKPP--------FNRFNEIVSA--GGKTVWGDPA 142
++LL G VT++ GDE ++ P F + A G V
Sbjct: 182 EKLLNLGKHVTVLDALHYGDEPLARVAGHPGLTVIREDFRHIEALTRAMSGMGVVIHLGG 241
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
VG+ V ++ +D N+ A + V + AK+ G K+F+F SS +Y DE
Sbjct: 242 LVGDPACAVDPELTID---INVTATKLVGEIAKACGAKRFIFASSCSVYGACDE 292
>gi|406965661|gb|EKD91272.1| hypothetical protein ACD_30C00029G0001 [uncultured bacterium]
Length = 262
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKPDAG-HVQVEKYISENFSNWA---- 226
K GVK+ +F SSA +Y P EG D P A + VE+++S N
Sbjct: 59 KEKGVKRIIFSSSATVYGEPKTLPLTEGMPLDSANPYAASKIAVEQFLSAYHKNHGFDVT 118
Query: 227 ---SFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
F P G G + E F + K+PVP+ G Q + ++ DL+ T
Sbjct: 119 ILRYFNP---YGPGEEHEPETHAIPNFIKNGLDKKPVPLYWKGEQTRDFIYIEDLAKAHT 175
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
+ ++ + NIFN+ +++ V + + + G +E+
Sbjct: 176 VVLDQ---SGFNIFNVGTEQGVRIIDVINKLSDILGYTLEV 213
>gi|419954701|ref|ZP_14470837.1| epimerase [Pseudomonas stutzeri TS44]
gi|387968565|gb|EIK52854.1| epimerase [Pseudomonas stutzeri TS44]
Length = 309
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
L + NL V + + GV++ LF SSA +Y E ++ D K +K
Sbjct: 90 LGTHQSNLIGTLNVCEAMCAEGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADK 149
Query: 217 YISENFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPG 260
SE++ ++ +R Q+ + G +D F +R + P+ + G
Sbjct: 150 LASEHYLDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFG 207
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA-AGLPVE 319
G Q + +V DL +L A+E+P AA + N+ RA +L+ + + GLP
Sbjct: 208 DGEQTRDFVYVGDLVEVLVQALESPVAAEGAV-NVGLSRATSLNQLLTAIGEVLGGLPA- 265
Query: 320 IVHYDPKAAGIDAKKA 335
+ + P+ I +A
Sbjct: 266 VSYQAPRPGDIRHSRA 281
>gi|418051490|ref|ZP_12689574.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
gi|353184182|gb|EHB49709.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
Length = 339
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 63/296 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G I YL +ELL +G+EV VG +N K P F S G V GD +
Sbjct: 6 TGSAGFIAGYLVEELLANGYEV----VGLDNYSKY-GPVERAFESNPSYTG--VEGDAKD 58
Query: 144 V----------------GNVVGGVT------FDVVLDNNGKNLDAVRPVADWA-KSSGVK 180
V ++GG++ +D +L N + + A WA ++S ++
Sbjct: 59 VALLKELLDSCDHLVAGAAIIGGISLFHELAYD-LLSENERITASTFDAAIWAHRNSSLR 117
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN--WASF-------R 229
+ +SS+ +Y+ P EG+ + P +K +E F+ W + R
Sbjct: 118 KITVVSSSMVYESTSSYPTPEGEQRRCPPPESTYGFQKLATEYFAQGAWEQYQLPYTIVR 177
Query: 230 PQYMIGSGNNKD-CEEWFFDRIVR-----------------KRPVPIPGSGMQFTNIAHV 271
P IG G + C+ VR + P+ I G G Q + +
Sbjct: 178 PFNCIGIGEKRALCDREIMSGNVRLAMSHVVPDLVQKVLKGQDPLHILGDGDQVRHYTYG 237
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ--AAGLPVEIVHYDP 325
DL+ + LA+E+ +AA + FNL + + T+ +A++ + P+ I DP
Sbjct: 238 GDLARGIRLAIES-DAAHNEDFNLSTATSTTVHELAEVIWRKIKGDTPLRITSDDP 292
>gi|15616277|ref|NP_244582.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans
C-125]
gi|10176339|dbj|BAB07434.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans
C-125]
Length = 282
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGH----VQVEKY 217
N D A AK G+KQF+F+SS +Y E ++ D + KP + + +Q EK
Sbjct: 74 NRDVAYEAAKKAKDEGIKQFIFLSSMSVY--GKENGIIDLDTLPKPTSNYGESKLQAEKL 131
Query: 218 IS---ENFSNWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIPGSGMQFTNIAHVR 272
I ++ + RP + G G C+ + ++ RK PV P + + I H+
Sbjct: 132 IEMLDDDSFKVVTIRPPMIYGKG----CKGNYPKLAKLARKLPV-FPDVENERSMI-HIE 185
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
+L + L ++N +A +F +D V M +L + G +++ +
Sbjct: 186 NLCEFMKLIIDNNDAG---LFLPQNDDFVKTSEMVRLIGETNGKRIKLTKF 233
>gi|340617983|ref|YP_004736436.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
gi|339732780|emb|CAZ96080.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
Length = 334
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 237 GNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G N++ W F D I++ + +PI G GMQ V D + + A PE A+
Sbjct: 184 GPNQNLSWWGGPQSVFIDCILKNKEIPIHGDGMQTRTFTFVDDTVAGIYAATMKPE-ANG 242
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLP----VEIVHYDPKAAG 329
IFN+ +++ +T+ +A + + + P ++++ Y+ +AG
Sbjct: 243 EIFNIGANQEITIIELANMLKRISNEPRTPEIKLIPYNEISAG 285
>gi|315644127|ref|ZP_07897297.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
gi|315280502|gb|EFU43791.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
Length = 338
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 109/279 (39%), Gaps = 38/279 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + K+LL G E+ ++ G+ N D + + +I D V
Sbjct: 7 GGTGTISSAITKQLLEQGCELYLLNRGNRN-DALPEGAHVLQADI---------HDEDHV 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPV---ADWAKSSG-VKQFLFISSAGIYK-PADEPPH 199
+V + FDVV D A P D+ G KQF+FISSA Y+ P +
Sbjct: 57 AQLVSDLHFDVVAD-----FIAFEPAHLERDYRLFEGRTKQFIFISSASAYQTPLSDYRI 111
Query: 200 VEGDVV-----KPDAGHVQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDCEEW 245
EG + + + E Y+ + + RP + I G + W
Sbjct: 112 TEGTPLSNPYWEYSRNKIACEDYLMKQYRETGFPVTIVRPSHTYDERSIPLGVHGSKGSW 171
Query: 246 -FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
R++ +PV I G G + H D + + N A ++ ++ SD ++T +
Sbjct: 172 QVVKRMLENKPVIIHGDGTSLWTLTHNSDFAKGFIGLMGNIHAIGESV-HITSDESLTWN 230
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
+ + A A G+ + VH + +DA FR ++
Sbjct: 231 QIYGIIADALGVQLNAVHVSSEF--LDATSTQDFRGSLW 267
>gi|302561009|ref|ZP_07313351.1| reductase [Streptomyces griseoflavus Tu4000]
gi|302478627|gb|EFL41720.1| reductase [Streptomyces griseoflavus Tu4000]
Length = 336
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 104/278 (37%), Gaps = 48/278 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG G + + LG G EVT+ F+R G +T+ GD V
Sbjct: 7 GGTEFAGRAVVEAALGRGWEVTV---------------FHRGLHEAPKGARTLLGDRTAV 51
Query: 145 GNVVG----GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH- 199
+ +DVV+D AVR A + +++++SS +Y A PP
Sbjct: 52 DGLAALDEDPGEWDVVVDTWSAAPRAVRDSARLLRGR-AGRYVYVSSCSVYAWA--PPAG 108
Query: 200 -------VEGDVVKPDAGHVQ-VEKYISENFSNWASF--------RPQYMIGSGNNKDCE 243
VEG PDA + + + + +F R ++G N
Sbjct: 109 YTERARVVEG--ASPDADRTEYAQDKLGGELAAVDAFGADRSLLVRAGLLLGPYENVGRL 166
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ R PV PG A VRDL+ + A E S +NL+S + T
Sbjct: 167 PWWLTRMARGGPVLAPGPRDLPLQYADVRDLAEWILGAAER---ELSGPYNLMSPQGHTT 223
Query: 304 DG-MAKLCAQAAGLPVEIVHYDPKA---AGIDAKKAFP 337
G + + CA G E+ P+ AGI+ P
Sbjct: 224 TGELLEACAAVTGGAAELRWTAPEVILDAGIEPWTQLP 261
>gi|229179320|ref|ZP_04306674.1| NAD-dependent epimerase/dehydratase [Bacillus cereus 172560W]
gi|228604218|gb|EEK61685.1| NAD-dependent epimerase/dehydratase [Bacillus cereus 172560W]
Length = 360
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++ G +
Sbjct: 21 KMLIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 68
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 69 N--GDVSSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 119
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 120 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 179
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 180 LLSGMFDYTDRLPYWIGRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 239
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 240 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|229819677|ref|YP_002881203.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229565590|gb|ACQ79441.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 310
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 225
A GV++F+ SSA +Y + P E D + P G + Y +W
Sbjct: 110 AADHGVERFVLASSASVYGDPKKLPMHEDDELSPLTPYCISKRTGEDLLAYYQRRAGLSW 169
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G G F +RI P I G G Q + HV D++ + L
Sbjct: 170 IALRFFNVYGPGQKTTAYYTSVINHFVNRIKNGEPPVIDGKGEQSMDFIHVHDIARAVVL 229
Query: 281 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
A+E+ + SN+ N+ + T+ +A++ A G VE + ++P+
Sbjct: 230 AMESEQ---SNVPVNVGTGIDTTVADLARILIDAVGADVEPI-FNPR 272
>gi|448667430|ref|ZP_21685930.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
gi|445769998|gb|EMA21066.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
Length = 327
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 108/277 (38%), Gaps = 40/277 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G + PF +++ G D E
Sbjct: 8 GGGRFIGRHTVTEFRDAGYDVTMLTRG------QRSNPFAN-SDVTHIKGDRNERDTLET 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ DVV+D VR D + V +++ISS Y + P EG+
Sbjct: 61 AR--KQIDPDVVVDCVAYFPRDVRVATD--VFADVDAYVYISSGAAYG-VERTPKREGET 115
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 116 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVRAMSVRPTVVYGPHDYTERFA 173
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ + +P G+ +A+V D++S L L E A + +N+ + A TL
Sbjct: 174 YWVDRVAEYDRIVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA--YNVGDEHAPTLR 231
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 338
L A+ VE + + AAG+D+ FP
Sbjct: 232 QWIGLLAKVHETDVETIGVGERELAAAGLDSDD-FPI 267
>gi|228928107|ref|ZP_04091151.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228831524|gb|EEM77117.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 340
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPHV--EGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHRIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ EN A
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAG--- 217
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + +T++ + C + E V D
Sbjct: 218 IFNVTGPNYDLTMEELLNTCKKVRHSDAEFVWVD 251
>gi|20093250|ref|NP_619325.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A]
gi|19918603|gb|AAM07805.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A]
Length = 298
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVLI +GG IG ++A+ +GH V I+ + + + P +R E +
Sbjct: 2 KVLI----TGGAGFIGSHIAEYFAEAGHSVRILD--NLTTGFSRNIPQHRNVEFIQGD-- 53
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNG---------KNLDAVR-------PVADWAKSSGV 179
DP+ V V G+ D V K ++A R V +GV
Sbjct: 54 --ICDPSSVEKAVSGM--DCVFHEAALVSVPLSCEKPVEAFRINTLGTLNVLQACVRAGV 109
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---KYISENFSNWASFRP---QYM 233
++F+ SSA +Y E P E +P + + + +Y++ F R +Y
Sbjct: 110 EKFVTASSAAVYGNNPELPKRENMYPEPASPYAISKLDGEYLARMFYEEHGLRTTCLRYF 169
Query: 234 IGSGNNKDCEE-------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
G +D + F +R + + I G G+Q + HV+D+ A+E+ +
Sbjct: 170 NVYGPRQDPKSPYAAVIPIFLERAKAGKDLVIYGDGLQSRDFVHVKDVVMANVAALEHGD 229
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+FN+ ++VT+ +A+ + G +I+H + +A + +A
Sbjct: 230 G---QVFNVAMGKSVTVLELAENIIELTGSSSQIIHAESRAGDVRDSRA 275
>gi|297584958|ref|YP_003700738.1| NmrA family protein [Bacillus selenitireducens MLS10]
gi|297143415|gb|ADI00173.1| NmrA family protein [Bacillus selenitireducens MLS10]
Length = 290
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 228
P + AK +G+ + +F+S G+ + P H ++E++I + N+
Sbjct: 90 PFINAAKEAGISRIVFVSLLGVER-------------NPFVPHRKIEQFIRSSGINYTFL 136
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP + + + + +++ VP+ G T+ RD++S+ + + + +
Sbjct: 137 RPSFFMQNLTTTHRSDIAIHKLL---DVPV---GKALTSFIDTRDIASVAAVCLTS-DLH 189
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+ + L +RA+ D MA + +P+E Y PK+
Sbjct: 190 QNKSYTLTGNRAIGYDEMANTLSHVLEIPIE---YQPKS 225
>gi|354566590|ref|ZP_08985762.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
gi|353545606|gb|EHC15057.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
Length = 335
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPDAGHVQVEKY 217
N+D +A AKS+GVK F++ISSA +Y K E + GD ++ EK
Sbjct: 93 NVDGTINIAKAAKSAGVKTFVYISSALVYGFNYPKNITEEGPLSGDNNPYCQTKIEAEKA 152
Query: 218 ISENFSNWASF-----RPQYMIGSGNNKDCEEWFFDRIV--RKRPVPIPGSGMQFTNIAH 270
+ + +N F R + G G+ W ++ R++ G GM N +
Sbjct: 153 LLQ-LNNPPDFGTIILRAGDVYGPGSIP----WIVRPLIMMRQKLFAYAGDGMGIINHVY 207
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
+ +L + + LA+E + A FN+ + T A+ AGLP
Sbjct: 208 IDNLVTAIFLAIE--KEAHGETFNITDGQETTWKEYFTCLAEMAGLP 252
>gi|259414846|ref|ZP_05738769.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B]
gi|259349297|gb|EEW61044.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B]
Length = 312
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 47/269 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN------RFNEIVSAGGKTV 137
+G ++G + + L + + ++T E D + + N R + IV A K
Sbjct: 13 AGHRGMVGSAVVRRL--ATEDCEVITAAREELDLVDQAAVNAWMQEQRPDAIVMAAAK-- 68
Query: 138 WGDPAEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA 194
VGG+ D +D KNL +A A + V++FLF+ S+ IY K A
Sbjct: 69 ----------VGGIKANNDFPVDFLYKNLMIETNIAQAAHEADVERFLFLGSSCIYPKFA 118
Query: 195 DEP------------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+P P E + AG ++ Y + +W S P + G G+N D
Sbjct: 119 PQPIPEDSLLTGALEPTNEWYAIAKIAGIKLMQAYRQQYGRDWISAMPTNLYGPGDNYDL 178
Query: 243 E-EWFFDRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
++RK V + GSG H DL+ L ++ E + +
Sbjct: 179 NSSHVLPALLRKFHEAKAAGATSVELWGSGTPLREFMHCDDLADALVFLLK--EYSGHSH 236
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
N+ S V++ +A+ A+ G E+V
Sbjct: 237 VNVGSGTEVSIRALAETIARVVGYEAELV 265
>gi|298481189|ref|ZP_06999383.1| mRNA-binding protein [Bacteroides sp. D22]
gi|298272763|gb|EFI14330.1| mRNA-binding protein [Bacteroides sp. D22]
Length = 357
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 37/254 (14%)
Query: 94 LAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAEVGNVVGGVT 152
+ KE L G ++T++ G KK + + I+ K W + N
Sbjct: 3 VLKEALNKGWDITVLNRGIH-----KKHIPDSVHRIIGDFKKVETWKEALHSCN------ 51
Query: 153 FDVVLD---NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA 209
FDVV+D N ++ V P+ + KQ++FISSA +Y+ +E ++ D KP+
Sbjct: 52 FDVVVDFLSRNPADISRVFPIL----KNNCKQYIFISSACVYRRNEEDFPIKEDSPKPNI 107
Query: 210 G-HVQVEKY--------ISENFSNWASFRPQYM--------IGSGNNKDCEEWFFDRIVR 252
VEKY +S+N + + Y+ G + +R+
Sbjct: 108 NWDYNVEKYNSEKELVKLSQNAPCYYTIIRPYITYDDERIPFGIAPSYKYHRTIIERLKN 167
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+P+ + G T + +V D + + N AA + F++ SD T + +
Sbjct: 168 GKPMFVWNEGNNITTLTYVSDFAKGVVGLFSN-NAAINEDFHITSDYQYTWNDFWSIFLA 226
Query: 313 AAGLPVEIVHYDPK 326
L I H D K
Sbjct: 227 KLNLKSTIYHVDAK 240
>gi|402559635|ref|YP_006602359.1| isoflavone reductase [Bacillus thuringiensis HD-771]
gi|423359970|ref|ZP_17337473.1| hypothetical protein IC1_01950 [Bacillus cereus VD022]
gi|401083131|gb|EJP91395.1| hypothetical protein IC1_01950 [Bacillus cereus VD022]
gi|401788287|gb|AFQ14326.1| isoflavone reductase [Bacillus thuringiensis HD-771]
Length = 341
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 112/288 (38%), Gaps = 45/288 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQYM 233
E +++P+ Q++ + S + + R +
Sbjct: 103 LHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGLL 162
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G + D ++ R+ + V +PG + I ++D+++ EN A + N+
Sbjct: 163 SGMFDYTDRLPYWIGRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAGTFNVT 222
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
D +T++ + C + E V D + ++ K P+ M
Sbjct: 223 GPNDD--LTMEELLNTCKKVTNSDAEFVWID--ESFMNEHKVQPWTEM 266
>gi|406666305|ref|ZP_11074073.1| NAD dependent epimerase/dehydratase family protein [Bacillus
isronensis B3W22]
gi|405385844|gb|EKB45275.1| NAD dependent epimerase/dehydratase family protein [Bacillus
isronensis B3W22]
Length = 295
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG G L + LL HEVTI+T G M + PF E +
Sbjct: 2 KKILVL----GGTRFFGRKLVELLLEQKHEVTIVTRG------MSENPFGDAVEHIKVDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K D G + FD+V DN + + + + D + + +F S+ +Y+ A
Sbjct: 52 K----DTEAFGKALENRIFDIVYDNICYSPNEAKQLCDLFNGK-IGKLVFTSTLAVYE-A 105
Query: 195 DEPPHVEGD 203
D PH E D
Sbjct: 106 DGKPHSEED 114
>gi|158338858|ref|YP_001520035.1| NAD dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
gi|158309099|gb|ABW30716.1| NAD dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
Length = 291
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 13/141 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----------AGHV 212
N+++ + D+A SG K+F++ SS G+Y H +V G V
Sbjct: 91 NIESTARLLDYAFKSGAKKFIYASSGGVYGNGPIAFHENSSIVSHQKLGHYLGSKVCGEV 150
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
V+ Y S + RP +M G+ + D +V RP+ + G N HV
Sbjct: 151 LVQSYAS--IFDVIILRPFFMYGANQRRTMLIPRLVDCVVEGRPIILQGKDGIRINPVHV 208
Query: 272 RDLSSMLTLAVENPEAASSNI 292
RD+ ++ + + + + N+
Sbjct: 209 RDVVDVIKFCLTSSGSLTLNV 229
>gi|383620553|ref|ZP_09946959.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|448697911|ref|ZP_21698789.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445781277|gb|EMA32138.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 306
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 110/284 (38%), Gaps = 55/284 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L+ +GG IG L EL GH+VT ++ + P +R + G +
Sbjct: 2 KILV----AGGTGFIGRNLCTELHDRGHDVTALS----------RSPDDRG---LPDGVE 44
Query: 136 TVWGDPAEVGNVVGGVT-FDVVL--------------DNNGKNLDAVRPVADWAKSSGVK 180
GD + ++ V D V+ D+ +L + D A++ GV
Sbjct: 45 VAMGDVSAADSIRDAVAGHDAVVNLVALSPLFQPRGTDHETVHLRGTENLVDLAETEGVD 104
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
+F+ +S+ G AD P + D ++ + E + E+ W FRP + G G
Sbjct: 105 RFVQLSALG----AD--PQGDTDYIRAKG---KAEGVVRESDLEWTIFRPSVVFGDGGE- 154
Query: 241 DCEEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F ++ P +PG G V DL ML A+E+ E + +
Sbjct: 155 ------FVEFTKELTTPYVTGLPGGGKTRFQPIWVGDLVPMLADALED-ETHVGETYEVA 207
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA--GIDAKKAFPF 338
+TL + +L +A G V ++ A G+ A PF
Sbjct: 208 GPEVLTLAEVTELAYEAEGKSVTVLPIPMPLAKLGLTAADPLPF 251
>gi|325276582|ref|ZP_08142325.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
gi|324098291|gb|EGB96394.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
Length = 310
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V I+ + G + ++ P V+ A
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDLSTGRRGNLQVDHPRLELIEGDVADAALVMRAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V V + N V + + G+++ +F SSA +Y
Sbjct: 69 AGCSAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGLRRVVFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESIAEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVYGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +++ M
Sbjct: 244 LNQATSINQM 253
>gi|15966500|ref|NP_386853.1| sulfolipid biosynthesis protein [Sinorhizobium meliloti 1021]
gi|334317504|ref|YP_004550123.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|384530630|ref|YP_005714718.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|407721813|ref|YP_006841475.1| sulfolipid biosynthesis protein [Sinorhizobium meliloti Rm41]
gi|433614579|ref|YP_007191377.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
gi|7021340|gb|AAF35290.1|AF194444_3 SqdC [Sinorhizobium meliloti]
gi|15075771|emb|CAC47326.1| Epimerase [Sinorhizobium meliloti 1021]
gi|333812806|gb|AEG05475.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|334096498|gb|AEG54509.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|407320045|emb|CCM68649.1| sulfolipid biosynthesis protein [Sinorhizobium meliloti Rm41]
gi|429552769|gb|AGA07778.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
Length = 308
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
SGG +G ++ + LL +G+EVT+ PP +++ VS + D +
Sbjct: 7 SGGTGFVGRFIIEHLLANGYEVTV--------GGRSPPPAGFYSQPVSHVPLRLDADADQ 58
Query: 144 VG--------------NVVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
G +V G G D NLD + + A+++GV++ +F+S
Sbjct: 59 AGAFDDIYYFVHAAFEHVEGRYRGGEGDDPTSFRRANLDGSVRLFEEARAAGVRRCVFLS 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVE-------KYISENFSNWASFRPQYMIGSGNN 239
S +Y P E V+PD + QV+ K ++++ S R + G +
Sbjct: 119 SRAVYGETAPPVVAETSPVEPDTFYGQVKLATENALKSMTDHSFVTTSLRVTGVYGPAGS 178
Query: 240 KDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEAASSNIFNLV 296
+W F + RPVP + H D++ + L +E P S +FN V
Sbjct: 179 GRKHKWSDLFSDYIAGRPVP-----RRIGTEVHGDDVAQAVRLMLETEPARISGQVFN-V 232
Query: 297 SD 298
SD
Sbjct: 233 SD 234
>gi|374711981|gb|AEZ64511.1| oxidoreductase [Streptomyces chromofuscus]
Length = 517
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG L ELL +GH V + K++ P+ EIV G T D A
Sbjct: 23 TGATGYIGGRLVPELLEAGHTVRCLA---RTPGKLRDHPWAERVEIVQ-GDVT---DAAS 75
Query: 144 VGNVVGGVTFDVVLDN--------NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
VG + G+ L + + A R + A+++GV++ +++ G P D
Sbjct: 76 VGAAMRGIDVAYYLVHALAAGPGFEATDRTAARVFGERARAAGVRRIVYL---GGLTPDD 132
Query: 196 EP-----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDR 249
P PH+ + + G + ++ + + R +IGSG+ + + +R
Sbjct: 133 VPVAELSPHLRS---RAEVGRILLDSGVPTT-----ALRAAVIIGSGSASFEMLRYLTER 184
Query: 250 IVRKRPVPIPGSGM--QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+ PV + S + + IA VRD+ L A PE + F++ +T M
Sbjct: 185 L----PVMVTPSWVSTRIQPIA-VRDVLRCLVAAARMPEDV-NRAFDIGGPDILTYRDMM 238
Query: 308 KLCAQAAGLPVEIV 321
+ A+AAGLP ++
Sbjct: 239 QRYARAAGLPRRLI 252
>gi|384537332|ref|YP_005721417.1| SqdC [Sinorhizobium meliloti SM11]
gi|336034224|gb|AEH80156.1| SqdC [Sinorhizobium meliloti SM11]
Length = 308
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
SGG +G ++ + LL +G+EVT+ PP +++ VS + D +
Sbjct: 7 SGGTGFVGRFIIEHLLANGYEVTV--------GGRSPPPAGFYSQPVSHVPLRLDADADQ 58
Query: 144 VG--------------NVVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
G +V G G D NLD + + A+++GV++ +F+S
Sbjct: 59 AGAFDDIYYFVHAAFEHVEGRYRGGEGDDPTSFRRANLDGSVRLFEEARAAGVRRCVFLS 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVE-------KYISENFSNWASFRPQYMIGSGNN 239
S +Y P E V+PD + QV+ K ++++ S R + G +
Sbjct: 119 SRAVYGETAPPIVAETSPVEPDTFYGQVKLATENALKSMTDHSFVTTSLRVTGVYGPAGS 178
Query: 240 KDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEAASSNIFNLV 296
+W F + RPVP + H D++ + L +E P S +FN V
Sbjct: 179 GRKHKWSDLFSDYIAGRPVP-----RRIGTEVHGDDVAQAVRLMLETEPARISGQVFN-V 232
Query: 297 SD 298
SD
Sbjct: 233 SD 234
>gi|319789777|ref|YP_004151410.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans
HB-1]
gi|317114279|gb|ADU96769.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans
HB-1]
Length = 314
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 48/288 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L + LL G EV ++ D ++ K+ P + E V K D
Sbjct: 6 TGGAGFIGSHLVEVLLSQGREVVVLD--DLSTGKLSNLPDSSSLEFV----KGSVTDEEL 59
Query: 144 VGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
V + F V L + N D + A S GVK+F+F SS
Sbjct: 60 VRRLFEEFNFSSVFHLAAVASVQRSVEEPLYCHRVNCDGTLYLLQSAVSRGVKRFIFASS 119
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS--------GNN 239
A +Y + P E V P + V+KY SE + SFR + G G
Sbjct: 120 AAVYGDLPQLPKREEMPVSPLTPYA-VDKYASERYV-VNSFRLYGLEGVALRFFNVFGER 177
Query: 240 KD-------CEEWFFDRIVRK---RPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+D F DR+ R PV + G G Q + +V+D+ S L +A E
Sbjct: 178 QDPSSPYSGVISIFIDRVKRYLTGEPVTVDIFGDGRQTRDFIYVKDVVSALLIAEER--G 235
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
++N+ + + +L + G EI + P+ G D K++
Sbjct: 236 VPGEVYNVGTGKETSLLELLDYIRDIVGTLPEI-RFLPERPG-DIKRS 281
>gi|162452033|ref|YP_001614400.1| UDP-glucose 4-epimerase [Sorangium cellulosum So ce56]
gi|161162615|emb|CAN93920.1| UDP-glucose 4-epimerase [Sorangium cellulosum So ce56]
Length = 348
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 15/188 (7%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
+++N N+ V D A+ GV++ LF +S+ Y P EG P + + V K
Sbjct: 93 IESNSVNVGGTVTVLDVARRQGVRRVLFAASSSAYGETPVLPKHEGMEPMPLSPYA-VTK 151
Query: 217 YISENFS---------NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSG 262
E++ S R + G D F D ++ RP+PI G G
Sbjct: 152 LACEHYMKVFAGIYGIETLSLRYFNVFGPNQTPDGAYAAAIPRFVDAALQNRPIPIFGDG 211
Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
Q + + + L + + + N+ R + L+ + K ++A G V + H
Sbjct: 212 EQTRDFCFIENTVLANLLGATSSKKFKGEVINIAGGRRIGLNELCKEISRALGRDVAVEH 271
Query: 323 YDPKAAGI 330
+A I
Sbjct: 272 LPARAGDI 279
>gi|222054185|ref|YP_002536547.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221563474|gb|ACM19446.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 293
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 55/254 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMT----------VGDENSDKMKKPPFNRFNEIVSAG 133
SGG +G +L K LL GH + ++ V D + F R AG
Sbjct: 6 SGGTGFVGGHLRKALLERGHHLKLLVHRPSGSYEPGVEQVEGDVTRPETFVRH----FAG 61
Query: 134 GKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
V N+VG GVTF + +++A R + AK +G+K++L +
Sbjct: 62 CDAVI-------NLVGIIREFPSRGVTFQRL------HVEATRNQVEAAKQAGIKRYLQM 108
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
S+ G A H Q E+++ ++ ++ FRP + G ++
Sbjct: 109 SALGTRDGATSRYH---------RTKYQAEQFVRDSQLDYTIFRPSIVFGPKDD------ 153
Query: 246 FFDRI---VRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
F +++ +R P VP+ G G D++ +A+E PE ++L +
Sbjct: 154 FINKLAGMIRTLPAVPVIGDGKYRLQPIAGDDVARCFAMALEMPETIGKT-YDLCGSTRL 212
Query: 302 TLDGMAKLCAQAAG 315
+ + + +A G
Sbjct: 213 SYNDLLDCIGRALG 226
>gi|159899402|ref|YP_001545649.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159892441|gb|ABX05521.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 348
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 101/265 (38%), Gaps = 31/265 (11%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
++KVL+ +GG +G L + L G+++ D +K ++I +
Sbjct: 3 RQKVLV----TGGAGFLGINLLRYLDAKGYDLVSYDFADWTYTDLKDHITIVKDDIRNVA 58
Query: 134 GKTVWGDPAEVGNVVGGVTFDV----------VLDNNGKNLDAVRPVADWAKSSGVKQFL 183
G + + GV F V D ++D R V + AK GVK+ +
Sbjct: 59 G---------LDRAMQGVDFVVHTAAALPLYPAEDIFSTDIDGTRNVLEVAKKHGVKRVV 109
Query: 184 FISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYISENFSNWAS----FRPQYMIGS 236
ISS +Y D P VE D V P + +Y++ + RP+ IG
Sbjct: 110 HISSTAVYGIPDHHPLVENDRLDGVGPYGKAKVMAEYVALEYRAKGMEVPIIRPKSFIGP 169
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+D + P+ G+G + V DL + L++ P +++ FN+
Sbjct: 170 -ERLGVFALLYDWAIDGHNFPMIGNGKNRYQLLDVEDLCDAIYLSMTLPAEVANDTFNMG 228
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIV 321
+ T+ + AG +I+
Sbjct: 229 AKEFATMKEDYQAVLDYAGHGKKII 253
>gi|218904179|ref|YP_002452013.1| hypothetical protein BCAH820_3063 [Bacillus cereus AH820]
gi|218537729|gb|ACK90127.1| conserved domain protein [Bacillus cereus AH820]
Length = 340
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|88603383|ref|YP_503561.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
gi|88188845|gb|ABD41842.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
Length = 313
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 43/275 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-----SDKMKKPPFNRFNEIVSAGGKTVW 138
+GG IG +L++ L G V I+ D SD ++ + + G + V
Sbjct: 8 TGGAGFIGSHLSQALAARGDRVIILDSLDSGKLCNISDLLEDDHVEFIEDTILNGSRLV- 66
Query: 139 GDPAEVGNVVGGV-----------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+ N + G+ + D N+ N+D + V + A+ + V + + SS
Sbjct: 67 ----SLCNGIDGIFHLAALVSVQRSIDDPRLNHRINIDGLFEVFEAARLARVPKIVLASS 122
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GN 238
A +Y PPH E P + + V K +SE ++ A + Y + S G
Sbjct: 123 AALYGNDYLPPHKETFASVPLSPYA-VGKCLSELYA--AVYTDLYGVHSVCLRFFNVYGP 179
Query: 239 NKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+D F D I R I G G Q + +V D+ L L++E + S
Sbjct: 180 KQDPSSPYSGVISKFMDAISRDDGFTIFGDGEQTRDFVYVLDVVQALILSMEK---SVSG 236
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+FN+ + +V+++ +A+ + +G V I + D +
Sbjct: 237 VFNVGTGASVSINHLARTIMEVSGKKVGIRYLDAR 271
>gi|422321589|ref|ZP_16402635.1| NAD-dependent epimerase/dehydratase [Achromobacter xylosoxidans
C54]
gi|317403536|gb|EFV84034.1| NAD-dependent epimerase/dehydratase [Achromobacter xylosoxidans
C54]
Length = 317
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 32/256 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L +EL G+ I+T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAALVRELQERGYR-HIITRSHSELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ V D +NL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQNHPV--DFLYRNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 --------------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFD 248
+ AG E Y + + + P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQRQYGARFICAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V + GSG +V DL+ + +E P A+ I+N+ +
Sbjct: 185 ALIRKFHEGREAGQDSVTLWGSGKPLREFLYVDDLARACVMLMETP--AAEGIYNIGAGE 242
Query: 300 AVTLDGMAKLCAQAAG 315
+++ +A++ AQ G
Sbjct: 243 DLSIAELARVVAQVVG 258
>gi|229164392|ref|ZP_04292322.1| NAD-dependent epimerase/dehydratase [Bacillus cereus R309803]
gi|228619135|gb|EEK76031.1| NAD-dependent epimerase/dehydratase [Bacillus cereus R309803]
Length = 317
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 49 SFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM 108
FL + R S+ V + KKVL++ GG G +L + LL GH+VTI
Sbjct: 4 CFLYSSVYNDRGSILQIIV-MGMMKLKKVLVL----GGTRFFGKHLVEALLQDGHDVTIA 58
Query: 109 TVG---DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD 165
T G D +K+ +R D ++ + ++D+V DN + +
Sbjct: 59 TRGITEDSFGSTVKRLIVDR-------------EDEKQLEECLEDKSYDIVYDNLCYSSN 105
Query: 166 AVRPVADWAKSSGVKQFLFISSAGIYKPA 194
A + V K K+++ SS +YKPA
Sbjct: 106 AAKIVCKVLKGK-TKKYIMTSSMAVYKPA 133
>gi|119383422|ref|YP_914478.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
gi|119373189|gb|ABL68782.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
Length = 310
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEK 216
+ N+ A R + D A+ +GVK+F+ SS IY + V D V+P + + + ++
Sbjct: 77 HAANVLATRRLLDAAEGAGVKRFVLASSPSIYADGTDRLDVAEDAPLPVRPLSLYAESKR 136
Query: 217 YISENFSNWA------SFRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTN 267
A + RP+ + G + R++ R +P+ G +
Sbjct: 137 AAERMVLGRAGAMICTAIRPRAIYGRHDRA-----LLPRVIDAMRHGRLPMIRGGRALID 191
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
+ H D + + LA P ++N+ S A + ++ A+ +GLPV
Sbjct: 192 LTHRHDAARGMILAASGPR---GGVWNITSGEAFRFRDLVEIIARRSGLPVR 240
>gi|318057300|ref|ZP_07976023.1| putative nucleoside-diphosphate-sugar epimerase [Streptomyces sp.
SA3_actG]
gi|318076224|ref|ZP_07983556.1| putative nucleoside-diphosphate-sugar epimerase [Streptomyces sp.
SA3_actF]
Length = 313
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPF---NRFNE 128
E+ ++ + +G ++G +A+ L GHEV T + + D + R +
Sbjct: 9 EQARIFV----AGHRGLVGSAVARRLGADGHEVLTRTRTELDLRDAAATAAYLRETRPDA 64
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+V A K VG ++ T+ V +NL V A ++GV++ LF+ S+
Sbjct: 65 VVLAAAK--------VGGIMANSTYPVQFLE--ENLQIQLSVIAGAHAAGVERLLFLGSS 114
Query: 189 GIY-KPADEPPHVEGDVVKP------------DAGHVQVEKYISENFSNWASFRPQYMIG 235
IY K A +P H + + P AG QV Y S+ + + S P + G
Sbjct: 115 CIYPKHAPQPIHEDALLTGPLEPTNQAYALAKIAGITQVRSYRSQYGAAYISAMPTNLYG 174
Query: 236 SGNNKDCE 243
G+N D E
Sbjct: 175 PGDNFDLE 182
>gi|228921707|ref|ZP_04085024.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837919|gb|EEM83243.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 341
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 117/290 (40%), Gaps = 49/290 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R + D K + +K ++FISS +YK D
Sbjct: 50 N--GDVSSLEN----RKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S++ + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISHYEHYGALKVLCEKEAEKYWPGRVVHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ N + N
Sbjct: 161 LLSGMFDYTDRLPYWIGRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNIAGNKNVGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ D +T++ + C + E V D + ++ K P+ M
Sbjct: 221 VTGPNYD--LTMEELLNTCKKVMNSDAEFVWVD--ESFMNGHKVQPWTEM 266
>gi|408484176|ref|ZP_11190395.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas sp. R81]
Length = 308
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 39/283 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN---- 127
K+VLI +GG IG +L LL G+ V ++ + G ++ + P
Sbjct: 3 KRVLI----TGGAGFIGSHLVDALLAKGYGVRVLDNLSTGKRSNLPLDNPRVELLEGDVA 58
Query: 128 --EIVS--AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
E+V+ A T A V +V V D + + N V + + +GVK+ +
Sbjct: 59 DAELVARAAVDTTAVVHLAAVASVQASV--DDPVSTHQSNFVGTLNVCEAMRKAGVKRVV 116
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS------- 236
+ SSA +Y E ++ + K +K E++ ++ +R Q+ +
Sbjct: 117 YASSAAVYGNNGEGASIDEETTKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFN 174
Query: 237 --GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
G +D F +R + P+ + G G Q + +V DL +L A+E P A
Sbjct: 175 IFGPRQDPSSPYSGVISIFSERAQQGVPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAPSA 234
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
I N+ +R TL + + + G LP V Y P +G
Sbjct: 235 PLGAI-NVGWNRTTTLKQVLQALEEIVGKLPT--VTYGPARSG 274
>gi|423611440|ref|ZP_17587301.1| hypothetical protein IIM_02155 [Bacillus cereus VD107]
gi|401247771|gb|EJR54099.1| hypothetical protein IIM_02155 [Bacillus cereus VD107]
Length = 345
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L +GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKNGHEVTLFNRG------TNKEIFPELEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + + +D V+D G + +R + + K + +K + FISS +YK
Sbjct: 47 ---GDRNDDVSSLENRKWDAVVDTCGFSPHHIRKIGEVLKDN-IKHYTFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDA----------GHVQVEKYI--------SENFSNW----ASFRPQY 232
P H++ D +++PD G + +Y E W R
Sbjct: 103 -PHHIQEDHILQPDPPVDKVKAVENGEISPYEYYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + ++D++S EN +A +
Sbjct: 162 LSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQFVDIKDVASFGLNMAENNKAGT--- 218
Query: 293 FNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C E V D
Sbjct: 219 FNVTGPKDELTMEELLNTCKDVTNSDAEFVWVD 251
>gi|448308312|ref|ZP_21498189.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445593600|gb|ELY47769.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 330
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 110/272 (40%), Gaps = 42/272 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-----KMKKPPFNRFNEIVSAGGKTVW 138
+GG IG L EL GHEVT ++ +SD ++ + + ++ I +TV
Sbjct: 41 AGGTGFIGTALCTELHERGHEVTALSRSPRSSDLPAAVEVARGDVSAYDSI----AETV- 95
Query: 139 GDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
AE VV V + D+ +L + A+ V +F+ +S+ G
Sbjct: 96 ---AEHDAVVNLVALSPLYKPPSGADHETVHLGGTANLVRAAEDGDVDRFVQMSALG--- 149
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
AD P+ + + ++ + E+ + ++ W FRP + G G+ F +
Sbjct: 150 -AD--PNGDTEYIRTKG---EAERVVRDSQLEWTIFRPSVVFGEGSE-------FIEFTK 196
Query: 253 KRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ P +PG G V DL ML A+E+ + I+ + + VTL +
Sbjct: 197 QLTTPYVTGLPGGGKTRFQPIWVGDLVPMLADALEDA-SHVGEIYEVAGPQIVTLSDATE 255
Query: 309 LCAQAAGLPVEIVHYDPKAA--GIDAKKAFPF 338
L +A G V I+ A G+ A PF
Sbjct: 256 LAYEAEGKSVSILSIPMPLAKLGLTAADPLPF 287
>gi|158335848|ref|YP_001517022.1| NAD-dependent epimerase/dehydratase [Acaryochloris marina
MBIC11017]
gi|158306089|gb|ABW27706.1| NAD-dependent epimerase/dehydratase, putative [Acaryochloris marina
MBIC11017]
Length = 344
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVE------GDVVKPD--AGHVQVEKYISENFSNWA 226
K K+F+ IS+ G++ + PP E GD+ + G + ++++ +E
Sbjct: 116 KQPDFKRFVHISTIGVHGHIENPPADETYRTSPGDLYQSTKLEGEIWIKQFGAETGLPIT 175
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
RP +IG G + + + ++V VP G+G ++ HV DL++ LA ++P
Sbjct: 176 IIRPAGIIGPGEKRLLKIY---KMVCSGLVPAIGNGGNLLHLIHVDDLTNCFLLASQHPN 232
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQ 312
A + IF + +++ M L ++
Sbjct: 233 AVNE-IFICGNQDSISFKEMVNLISK 257
>gi|452954631|gb|EME60031.1| UDP-glucose 4-epimerase [Amycolatopsis decaplanina DSM 44594]
Length = 309
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 225
A GV++ +F S+A +Y P E D +KP AG + Y +W
Sbjct: 109 AADEGVERLVFASTASVYGDPKRLPMHEDDELKPLTPYCISKRAGEDMLGFYERTKGLSW 168
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G G + F R+ +P I G G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLARAVVA 228
Query: 281 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVE 319
A+E+ +A N+ N+ + ++ +AK+ A G+ VE
Sbjct: 229 ALESEQA---NLPINIGTGIDTSIATLAKILIDAVGVNVE 265
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,577,864,143
Number of Sequences: 23463169
Number of extensions: 243349526
Number of successful extensions: 692248
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 1827
Number of HSP's that attempted gapping in prelim test: 689390
Number of HSP's gapped (non-prelim): 2612
length of query: 349
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 206
effective length of database: 9,003,962,200
effective search space: 1854816213200
effective search space used: 1854816213200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)