Your job contains 1 sequence.
>018901
MASIRSLSFMVETKADSYVVLFSKNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNK
SGHLLKVKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSS
IKSDIANSEEDEVSYEERENSFSDLDFTSTSSSNVVENQNGIIPSSSGDHSTANEAPKLQ
SSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSP
KEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVA
GALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQSFVSPSRK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018901
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102102 - symbol:SS2 "starch synthase 2" speci... 401 1.8e-36 1
UNIPROTKB|Q42968 - symbol:WAXY "Granule-bound starch synt... 190 3.7e-12 1
TAIR|locus:2037950 - symbol:GBSS1 "granule bound starch s... 190 3.7e-12 1
TAIR|locus:2169749 - symbol:SS1 "starch synthase 1" speci... 181 4.5e-11 1
UNIPROTKB|Q9XHN9 - symbol:Q9XHN9 "Granule bound starch sy... 120 6.8e-07 1
TIGR_CMR|GSU_1023 - symbol:GSU_1023 "glycogen synthase" s... 137 2.9e-06 1
TIGR_CMR|GSU_3257 - symbol:GSU_3257 "glycogen synthase" s... 133 7.6e-06 1
TIGR_CMR|BA_5120 - symbol:BA_5120 "glycogen synthase" spe... 124 7.5e-05 1
>TAIR|locus:2102102 [details] [associations]
symbol:SS2 "starch synthase 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0009011 "starch synthase activity" evidence=IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC008261 GO:GO:0009501 eggNOG:COG0297 HOGENOM:HOG000294940
KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0010021
GO:GO:0019252 EMBL:AY054467 EMBL:BT002555 IPI:IPI00531533
RefSeq:NP_186767.1 UniGene:At.18317 ProteinModelPortal:Q9MAC8
SMR:Q9MAC8 IntAct:Q9MAC8 STRING:Q9MAC8 PaxDb:Q9MAC8 PRIDE:Q9MAC8
EnsemblPlants:AT3G01180.1 GeneID:820294 KEGG:ath:AT3G01180
TAIR:At3g01180 InParanoid:Q9MAC8 OMA:ECAPFSK PhylomeDB:Q9MAC8
ProtClustDB:CLSN2684979 Genevestigator:Q9MAC8 Uniprot:Q9MAC8
Length = 792
Score = 401 (146.2 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 92/178 (51%), Positives = 109/178 (61%)
Query: 164 PSSSGDHSTANEAPKLQSSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTW 223
P D +T N P SS D K S SPEK S + S + + W
Sbjct: 192 PQKPSDVAT-NGKP--WSSVVASSVDPPYKPSSVMTSPEKTSDPVTSPGKPSKSRAGAFW 248
Query: 224 SDELPSFLSRTAVISSPKEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILV 283
SD LPS+L++ S+ K E++ + V SE EP +E KPPPLAGANVMNVILV
Sbjct: 249 SDPLPSYLTKAPQTSTMKTEKYVEKTPDVAS--SETNEPGKDEEKPPPLAGANVMNVILV 306
Query: 284 AAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQ 341
AAEC P+SKTGGLGDVAGALPK+LARRGHRVMVV P Y YAE +D G+RKRY+V Q
Sbjct: 307 AAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYKVAGQ 364
Score = 191 (72.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 75/242 (30%), Positives = 111/242 (45%)
Query: 10 MVETKADSYVVLFS-KNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNKSGHLLK-V 67
M S+ +L K Q R +SS R + + S+S F RS GH K V
Sbjct: 1 MASVAESSFPLLCQIKTQRRINSS--TLRHSRVSYHDLPSGSLS-FRSRSFVLGHRCKCV 57
Query: 68 KHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSSIKSDIAN 127
V+A+G+ +D+ EPED+LQATI+KSKKVLAMQ+ LL QI+ERRKLVSSIK +
Sbjct: 58 SRVEASGS---DDD---EPEDALQATIDKSKKVLAMQRNLLHQIAERRKLVSSIKESTPD 111
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVENQNGII-PSSSGDHSTANE------APKLQ 180
+ + NG + PS+ G S + E +P +
Sbjct: 112 LDDAKASSKQESASSVNANTDATKKEIMDGDANGSVSPSTYGKSSLSKEPEAKTFSPSTE 171
Query: 181 SSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSP 240
S + A S SP+K S D+ ++ G S + + ++V++SP
Sbjct: 172 SLKNRKQSSASVISSSPVTSPQKPS-DVATN----GKPWSSVVASSVDPPYKPSSVMTSP 226
Query: 241 KE 242
++
Sbjct: 227 EK 228
>UNIPROTKB|Q42968 [details] [associations]
symbol:WAXY "Granule-bound starch synthase 1,
chloroplastic/amyloplastic" species:4538 "Oryza glaberrima"
[GO:0004373 "glycogen (starch) synthase activity" evidence=ISS]
[GO:0005982 "starch metabolic process" evidence=ISS] [GO:0009501
"amyloplast" evidence=ISS] InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 GO:GO:0005982
GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252
GO:GO:0033840 EMBL:D10472 ProteinModelPortal:Q42968
EnsemblPlants:ORGLA06G0020500.1 Gramene:Q42968 Uniprot:Q42968
Length = 609
Score = 190 (71.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 38/68 (55%), Positives = 45/68 (66%)
Query: 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
GA MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT +
Sbjct: 80 GAG-MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVV 138
Query: 334 KRYRV-DR 340
+V DR
Sbjct: 139 AEIKVADR 146
>TAIR|locus:2037950 [details] [associations]
symbol:GBSS1 "granule bound starch synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0009011 "starch synthase
activity" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009250 "glucan biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC006424 eggNOG:COG0297 HOGENOM:HOG000294940 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252 EMBL:AY094405
EMBL:AY123983 EMBL:AY149948 EMBL:AY088544 IPI:IPI00520957
PIR:F86453 RefSeq:NP_174566.1 UniGene:At.11953
ProteinModelPortal:Q9MAQ0 SMR:Q9MAQ0 IntAct:Q9MAQ0 STRING:Q9MAQ0
PaxDb:Q9MAQ0 PRIDE:Q9MAQ0 EnsemblPlants:AT1G32900.1 GeneID:840184
KEGG:ath:AT1G32900 TAIR:At1g32900 InParanoid:Q9MAQ0 KO:K13679
OMA:ERYPQNI PhylomeDB:Q9MAQ0 ProtClustDB:CLSN2682839
Genevestigator:Q9MAQ0 GermOnline:AT1G32900 GO:GO:0009568
GO:GO:0033840 Uniprot:Q9MAQ0
Length = 610
Score = 190 (71.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 42/96 (43%), Positives = 58/96 (60%)
Query: 249 LDQVQQ-IDSEPIEPKTEE-AKPPPLAGANV----MNVILVAAECGPWSKTGGLGDVAGA 302
+D +Q+ ++P+ K+ + + AG V M+VI + AE GPWSKTGGLGDV G
Sbjct: 49 VDNLQRRSQAKPVSAKSSKRSSKVKTAGKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGG 108
Query: 303 LPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRV 338
LP ALA RGHRVM + P Y Y + DT + + +V
Sbjct: 109 LPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIKV 144
>TAIR|locus:2169749 [details] [associations]
symbol:SS1 "starch synthase 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009250 "glucan
biosynthetic process" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0009011
"starch synthase activity" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010021 "amylopectin biosynthetic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019375 "galactolipid
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00152 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AB006701 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP GO:GO:0010021 GO:GO:0019252 EMBL:AY128273 EMBL:AK226881
EMBL:AF121673 IPI:IPI00518916 RefSeq:NP_001190378.1
RefSeq:NP_197818.1 UniGene:At.22528 ProteinModelPortal:Q9FNF2
SMR:Q9FNF2 STRING:Q9FNF2 PaxDb:Q9FNF2 PRIDE:Q9FNF2
EnsemblPlants:AT5G24300.1 EnsemblPlants:AT5G24300.2 GeneID:832497
KEGG:ath:AT5G24300 TAIR:At5g24300 InParanoid:Q9FNF2
PhylomeDB:Q9FNF2 ProtClustDB:CLSN2686324 Genevestigator:Q9FNF2
GermOnline:AT5G24300 Uniprot:Q9FNF2
Length = 652
Score = 181 (68.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 48/104 (46%), Positives = 60/104 (57%)
Query: 242 EERHEKDLDQVQQID-SEPIEPKTEEAKPP---PLAGANVMN-VILVAAECGPWSKTGGL 296
EE+ E +DQ+ D P EE P A V+N ++ V +E P+SKTGGL
Sbjct: 102 EEKKEA-IDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVTSEAAPYSKTGGL 160
Query: 297 GDVAGALPKALARRGHRVMVVAPHY--G-----NYAEPQDTGIR 333
GDV G+LP ALA RGHRVMV++P Y G NYA +D GIR
Sbjct: 161 GDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIR 204
>UNIPROTKB|Q9XHN9 [details] [associations]
symbol:Q9XHN9 "Granule bound starch synthase" species:39947
"Oryza sativa Japonica Group" [GO:0005982 "starch metabolic
process" evidence=IEP] GO:GO:0009507 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 GO:GO:0005982 EMBL:AF092444 STRING:Q9XHN9
Gramene:Q9XHN9 Uniprot:Q9XHN9
Length = 113
Score = 120 (47.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALA 308
GA MNV+ V AE PWSKTGGLGDV G LP A+A
Sbjct: 80 GAG-MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMA 113
>TIGR_CMR|GSU_1023 [details] [associations]
symbol:GSU_1023 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 RefSeq:NP_952077.1 ProteinModelPortal:Q74ED9
GeneID:2685960 KEGG:gsu:GSU1023 PATRIC:22024816 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 OMA:IYFIDHE ProtClustDB:CLSK924464
BioCyc:GSUL243231:GH27-1018-MONOMER GO:GO:0009011
TIGRFAMs:TIGR02095 Uniprot:Q74ED9
Length = 501
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRK 334
+N+++ A+EC P++K GGL DV G LPK LA GH V VV P Y +P+ G+ +
Sbjct: 4 LNILMAASECVPFAKEGGLADVVGVLPKYLAHMGHDVRVVMPLYSRI-DPERFGLER 59
>TIGR_CMR|GSU_3257 [details] [associations]
symbol:GSU_3257 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_954298.1
ProteinModelPortal:Q747K8 GeneID:2685785 KEGG:gsu:GSU3257
PATRIC:22029355 OMA:DEWNPAA ProtClustDB:CLSK829188
BioCyc:GSUL243231:GH27-3233-MONOMER Uniprot:Q747K8
Length = 484
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRK 334
M V++VA+E P+++TGGL +V ALP AL R GH V V+ P Y A + G+RK
Sbjct: 1 MKVLMVASEVAPFARTGGLAEVTAALPAALRRMGHDVRVIMPFY-RCAAQTELGVRK 56
>TIGR_CMR|BA_5120 [details] [associations]
symbol:BA_5120 "glycogen synthase" species:198094 "Bacillus
anthracis str. Ames" [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] [GO:0009011 "starch synthase activity" evidence=ISS]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_847306.1
RefSeq:YP_021773.2 RefSeq:YP_031002.1 ProteinModelPortal:Q81K85
IntAct:Q81K85 DNASU:1084436 EnsemblBacteria:EBBACT00000008312
EnsemblBacteria:EBBACT00000017669 EnsemblBacteria:EBBACT00000022941
GeneID:1084436 GeneID:2819822 GeneID:2849958 KEGG:ban:BA_5120
KEGG:bar:GBAA_5120 KEGG:bat:BAS4758 OMA:ADVIMVP
ProtClustDB:PRK00654 BioCyc:BANT260799:GJAJ-4812-MONOMER
BioCyc:BANT261594:GJ7F-4972-MONOMER Uniprot:Q81K85
Length = 476
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
MN++ +EC P+ K+GGL DVAGALPK L + G V ++ P+Y
Sbjct: 1 MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNY 44
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.126 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 322 0.00085 116 3 11 23 0.50 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 602 (64 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.19u 0.10s 35.29t Elapsed: 00:00:01
Total cpu time: 35.19u 0.10s 35.29t Elapsed: 00:00:01
Start: Fri May 10 09:57:45 2013 End: Fri May 10 09:57:46 2013