BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018901
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic
OS=Solanum tuberosum GN=SS2 PE=1 SV=3
Length = 767
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 195/356 (54%), Gaps = 54/356 (15%)
Query: 19 VVLFSKNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNKSGHLLKVKHVKATGAGFV 78
++L S NQ+ P+ A RPKK + + + ++K VKATG
Sbjct: 5 ILLHSGNQFHPNLPLLALRPKKLSLI------------HGSSREQMWRIKRVKATGENSG 52
Query: 79 EDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSSIKSDIANSEEDEVSYEER 138
E S +E D+LQ TIEKSKKVLAMQ+ LLQQI+ERRK+VSSIKS +AN++ +Y+
Sbjct: 53 EAASADESNDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLANAKG---TYDGG 109
Query: 139 ENSFSDLDFT-----------STSSSNVVENQNGIIPSSSGD---------HSTANE-AP 177
S SD+D ST+++ + + P+ S D A+E AP
Sbjct: 110 SGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREIKRDLADERAP 169
Query: 178 KLQSSAANRGPDAGGKESENRL---------SPEKESIDIDSSKLL---KGTDTQSTWSD 225
L S+ S R S ++ +D++S K L G QS
Sbjct: 170 PLSRSSITASSQISSTVSSKRTLNVPPETPKSSQETLLDVNSRKSLVDVPGKKIQSY--- 226
Query: 226 ELPSFLSRTAVISSPKEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAA 285
+PS ++ +S E+R+E + + E +P + KPPPLAG NVMN+ILVA+
Sbjct: 227 -MPSLRKESS--ASHVEQRNENLEGSSAEANEETEDPVNIDEKPPPLAGTNVMNIILVAS 283
Query: 286 ECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQ 341
EC PWSKTGGLGDVAGALPKALARRGHRVMVVAP Y NY EPQD+G+RK Y+VD Q
Sbjct: 284 ECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVDGQ 339
>sp|Q9MAC8|SSY2_ARATH Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis
thaliana GN=SS2 PE=2 SV=1
Length = 792
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/330 (42%), Positives = 181/330 (54%), Gaps = 50/330 (15%)
Query: 54 FSFRSNKSGHLLK-VKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQIS 112
F RS GH K V V+A+G+ +EPED+LQATI+KSKKVLAMQ+ LL QI+
Sbjct: 43 FRSRSFVLGHRCKCVSRVEASGS------DDDEPEDALQATIDKSKKVLAMQRNLLHQIA 96
Query: 113 ERRKLVSSIKSDIANSEEDEVSYEERENSFSDLDFTSTSSSNVVENQNGII-PSSSGDHS 171
ERRKLVSSIK + ++ + S ++ S + + +T + + NG + PS+ G S
Sbjct: 97 ERRKLVSSIKESTPDLDDAKASSKQESASSVNANTDATKKEIMDGDANGSVSPSTYGKSS 156
Query: 172 TANE------------------------------APKLQSSAANRGP----------DAG 191
+ E +P+ S A G D
Sbjct: 157 LSKEPEAKTFSPSTESLKNRKQSSASVISSSPVTSPQKPSDVATNGKPWSSVVASSVDPP 216
Query: 192 GKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSPKEERHEKDLDQ 251
K S SPEK S + S + + WSD LPS+L++ S+ K E++ +
Sbjct: 217 YKPSSVMTSPEKTSDPVTSPGKPSKSRAGAFWSDPLPSYLTKAPQTSTMKTEKYVEKTPD 276
Query: 252 VQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG 311
V SE EP +E KPPPLAGANVMNVILVAAEC P+SKTGGLGDVAGALPK+LARRG
Sbjct: 277 VAS--SETNEPGKDEEKPPPLAGANVMNVILVAAECAPFSKTGGLGDVAGALPKSLARRG 334
Query: 312 HRVMVVAPHYGNYAEPQDTGIRKRYRVDRQ 341
HRVMVV P Y YAE +D G+RKRY+V Q
Sbjct: 335 HRVMVVVPRYAEYAEAKDLGVRKRYKVAGQ 364
>sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic
OS=Pisum sativum PE=1 SV=1
Length = 752
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 170/279 (60%), Gaps = 13/279 (4%)
Query: 68 KHVKATGAGFVEDESGNEPEDSL-QATIEKSKKVLAMQKQLLQQISERRKLVSSIKSD-I 125
+HV+A G F DE+G+ ED + ATIEKSKKVLA+Q++L+QQI+ER+KLVSSI SD I
Sbjct: 54 QHVRAVGKSFGADENGDGSEDDVVNATIEKSKKVLALQRELIQQIAERKKLVSSIDSDSI 113
Query: 126 ANSEEDEVSYEERENSFS---DLDFTSTSSSNVVENQNGIIPSSSGDHSTANEAPKLQSS 182
E + VSYE E S S + S+SS + VE + S E + S
Sbjct: 114 PGLEGNGVSYESSEKSLSRDSNPQKGSSSSGSAVETKRWHCFQQLC-RSKETETWAVSSV 172
Query: 183 AANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSPKE 242
N+G D E E + K S + ++ +K + + ++ S + +++ E
Sbjct: 173 GINQGFD----EIEKKNDAVKASSKLHFNEQIKNKLYERPDTKDISSSIRTSSLKFENFE 228
Query: 243 ERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGA 302
+E +V ++E E E KPPPLAG NVMN+ILV+AEC PWSKTGGLGDVAG+
Sbjct: 229 GANEPSSKEVAN-EAENFESGGE--KPPPLAGTNVMNIILVSAECAPWSKTGGLGDVAGS 285
Query: 303 LPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQ 341
LPKALARRGHRVM+VAPHYGNYAE D G+RKRY+V Q
Sbjct: 286 LPKALARRGHRVMIVAPHYGNYAEAHDIGVRKRYKVAGQ 324
>sp|Q0DDE3|SSY23_ORYSJ Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-3 PE=1 SV=1
Length = 810
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 60/73 (82%)
Query: 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT 330
PLAG NVMNVI+VAAEC PW KTGGLGDVAGALPKALARRGHRVMVV P YG+YAE QD
Sbjct: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
Query: 331 GIRKRYRVDRQSF 343
GIRK Y+ Q
Sbjct: 372 GIRKYYKAAGQDL 384
>sp|P0C586|SSY23_ORYSI Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza
sativa subsp. indica GN=SSII-3 PE=1 SV=1
Length = 810
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 60/73 (82%)
Query: 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT 330
PLAG NVMNVI+VAAEC PW KTGGLGDVAGALPKALARRGHRVMVV P YG+YAE QD
Sbjct: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
Query: 331 GIRKRYRVDRQSF 343
GIRK Y+ Q
Sbjct: 372 GIRKYYKAAGQDL 384
>sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-2 PE=2 SV=2
Length = 694
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 63/78 (80%)
Query: 264 TEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323
+E + PLAG NVMNVI+VA+EC P+ KTGGLGDV GALPKALARRGHRVMVV P YG
Sbjct: 189 SENKESGPLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGE 248
Query: 324 YAEPQDTGIRKRYRVDRQ 341
YAE +D G+RKRYRV Q
Sbjct: 249 YAEAKDLGVRKRYRVAGQ 266
>sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-1 PE=2 SV=2
Length = 749
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Query: 245 HEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALP 304
+E L Q+ ++ E +++ P A +++N+ILVAAEC PWSKTGGLGDVAGALP
Sbjct: 227 YEAQLSQISEMGQSVAEGTSDD--PSASAAVDLINIILVAAECAPWSKTGGLGDVAGALP 284
Query: 305 KALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQ 341
KALARRGHRVMVV P Y NYAEPQ G +RY+V Q
Sbjct: 285 KALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQ 321
>sp|Q9FNF2|SSY1_ARATH Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis
thaliana GN=SS1 PE=2 SV=1
Length = 652
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 242 EERHEKDLDQVQQID-----SEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGL 296
EE+ E +DQ+ D + +E E P V N++ V +E P+SKTGGL
Sbjct: 102 EEKKEA-IDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVTSEAAPYSKTGGL 160
Query: 297 GDVAGALPKALARRGHRVMVVAPHY-------GNYAEPQDTGIR 333
GDV G+LP ALA RGHRVMV++P Y NYA +D GIR
Sbjct: 161 GDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIR 204
>sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum
tuberosum PE=2 SV=1
Length = 641
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 256 DSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVM 315
D + + TEE + P+ N+I V AE P+SKTGGLGDV G+LP ALA RGHRVM
Sbjct: 111 DRDDLSEDTEEMEETPIK--LTFNIIFVTAEAAPYSKTGGLGDVCGSLPMALAARGHRVM 168
Query: 316 VVAPHYGN-------YAEPQDTGIR 333
VV+P Y N YA D +R
Sbjct: 169 VVSPRYLNGGPSDEKYANAVDLDVR 193
>sp|A7H6L1|GLGA_ANADF Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA
PE=3 SV=1
Length = 475
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ VA+E PWSKTGGLGDVAGALP+ALA RGH V VV P YG +P +R +R
Sbjct: 1 MEILFVASEVAPWSKTGGLGDVAGALPRALAARGHAVSVVTPRYGT-IDPHAHRLRPLHR 59
>sp|B4ULD8|GLGA_ANASK Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3
SV=1
Length = 475
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
M ++ VA+E GPWSKTGGLGDVAGALP+ALA RG+ V VV P +G+ +P+ G++
Sbjct: 1 MQILFVASEVGPWSKTGGLGDVAGALPQALAERGNEVAVVTPRHGSI-DPRAAGLQ 55
>sp|B8J8R4|GLGA_ANAD2 Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 /
ATCC BAA-258) GN=glgA PE=3 SV=1
Length = 477
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
M ++ VA+E GPWSKTGGLGDVAGALP+ALA RG+ V VV P +G+ +P G++
Sbjct: 1 MQILFVASEVGPWSKTGGLGDVAGALPQALAERGNEVAVVTPRHGSI-DPHAAGLQ 55
>sp|Q2IM81|GLGA_ANADE Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=glgA PE=3 SV=1
Length = 475
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGI 332
M ++ VA+E PWSKTGGLGDVAGALP+ALA RG+ V+VV P +G+ +P+ G+
Sbjct: 1 MQILFVASEVAPWSKTGGLGDVAGALPRALAERGNEVVVVTPRHGSI-DPRAAGL 54
>sp|Q8E5V5|GLGA_STRA3 Glycogen synthase OS=Streptococcus agalactiae serotype III (strain
NEM316) GN=glgA PE=3 SV=1
Length = 476
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V+VV P+Y
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYY 44
>sp|Q8E079|GLGA_STRA5 Glycogen synthase OS=Streptococcus agalactiae serotype V (strain
ATCC BAA-611 / 2603 V/R) GN=glgA PE=3 SV=1
Length = 476
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V VV P+Y
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVAVVMPYY 44
>sp|Q3K1K2|GLGA_STRA1 Glycogen synthase OS=Streptococcus agalactiae serotype Ia (strain
ATCC 27591 / A909 / CDC SS700) GN=glgA PE=3 SV=1
Length = 476
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V VV P+Y
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVAVVMPYY 44
>sp|A8AYH0|GLGA_STRGC Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1
Length = 476
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH+V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKHGHQVGVILPYY 44
>sp|C0MH77|GLGA_STRS7 Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus
(strain H70) GN=glgA PE=3 SV=1
Length = 476
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P++KTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLVKNGHEVFVILPYY 44
>sp|C1CRM3|GLGA_STRZT Glycogen synthase OS=Streptococcus pneumoniae (strain Taiwan19F-14)
GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|C1CKI7|GLGA_STRZP Glycogen synthase OS=Streptococcus pneumoniae (strain P1031)
GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|C1C7B7|GLGA_STRP7 Glycogen synthase OS=Streptococcus pneumoniae (strain 70585)
GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|B2IPY4|GLGA_STRPS Glycogen synthase OS=Streptococcus pneumoniae (strain CGSP14)
GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|Q97QS5|GLGA_STRPN Glycogen synthase OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|B5E4N6|GLGA_STRP4 Glycogen synthase OS=Streptococcus pneumoniae serotype 19F (strain
G54) GN=glgA PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|Q8DPS3|GLGA_STRR6 Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=glgA PE=3 SV=1
Length = 477
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|B1IBR0|GLGA_STRPI Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6)
GN=glgA PE=3 SV=1
Length = 477
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|Q04KG5|GLGA_STRP2 Glycogen synthase OS=Streptococcus pneumoniae serotype 2 (strain
D39 / NCTC 7466) GN=glgA PE=3 SV=1
Length = 477
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|C1CEB0|GLGA_STRZJ Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA
PE=3 SV=1
Length = 477
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|B8ZPW5|GLGA_STRPJ Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 /
Spain 23F-1) GN=glgA PE=3 SV=1
Length = 477
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYY 44
>sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. indica GN=OsI_021017 PE=2 SV=1
Length = 641
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325
+V+ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y N A
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGA 180
>sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1
Length = 641
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325
+V+ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y N A
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGA 180
>sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum
GN=WSSI-2 PE=2 SV=2
Length = 647
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323
+++ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y N
Sbjct: 140 SIVFVTGEAAPYAKSGGLGDVCGSLPIALAARGHRVMVVMPRYLN 184
>sp|P39125|GLGA_BACSU Glycogen synthase OS=Bacillus subtilis (strain 168) GN=glgA PE=2
SV=1
Length = 484
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKR 335
M ++ +EC P+ K+GGL DVAGALPKALAR G+ V V+ P Y EP ++K+
Sbjct: 1 MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQ 58
>sp|C0M712|GLGA_STRE4 Glycogen synthase OS=Streptococcus equi subsp. equi (strain 4047)
GN=glgA PE=3 SV=1
Length = 476
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ VAAE P++KTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLVKNGHEVSVILPYY 44
>sp|Q1DCS0|GLGA_MYXXD Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA
PE=3 SV=1
Length = 477
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
MNV+ +++E P+SKTGGLGDVAGALP ALA GH V V+ P Y
Sbjct: 1 MNVLFISSEVAPFSKTGGLGDVAGALPAALASLGHDVKVITPRY 44
>sp|Q9KDX6|GLGA_BACHD Glycogen synthase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=glgA PE=3 SV=1
Length = 476
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326
MNV+ VA+EC P+ KTGGL DV G+LPKAL ++G V V+ P YG+ ++
Sbjct: 1 MNVLHVASECNPFFKTGGLADVLGSLPKALIKQGINVSVILPKYGHLSD 49
>sp|Q935Y7|GLGA_SYNE7 Glycogen synthase OS=Synechococcus elongatus (strain PCC 7942)
GN=glgA PE=3 SV=3
Length = 465
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322
M ++ VAAEC P++K GG+GDV G+LPK L GH V + P+YG
Sbjct: 1 MRILFVAAECAPFAKVGGMGDVVGSLPKVLKALGHDVRIFMPYYG 45
>sp|Q5N1P1|GLGA_SYNP6 Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=glgA PE=3 SV=1
Length = 465
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322
M ++ VAAEC P++K GG+GDV G+LPK L GH V + P+YG
Sbjct: 1 MRILFVAAECAPFAKVGGMGDVVGSLPKVLKALGHDVRIFMPYYG 45
>sp|A3CM04|GLGA_STRSV Glycogen synthase OS=Streptococcus sanguinis (strain SK36) GN=glgA
PE=3 SV=1
Length = 476
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ AAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y
Sbjct: 1 MKILFAAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVGVILPYY 44
>sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Solanum tuberosum GN=WAXY PE=1 SV=1
Length = 607
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 244 RHEKDLDQVQQIDSEPIEPKT---EEAKPPPLAGANV----MNVILVAAECGPWSKTGGL 296
R LD +Q + + PK E K P + V MN+I V E GPWSKTGGL
Sbjct: 40 RAVNKLDGLQSRTNTKVTPKMASRTETKRPGCSATIVCGKGMNLIFVGTEVGPWSKTGGL 99
Query: 297 GDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRV 338
GDV G LP ALA RGHRVM ++P Y Y + DT + +V
Sbjct: 100 GDVLGGLPPALAARGHRVMTISPRYDQYKDAWDTSVAVEVKV 141
>sp|B9DRS8|GLGA_STRU0 Glycogen synthase OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=glgA PE=3 SV=1
Length = 478
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M ++ +AAE P++KTGGLGDV GALPK+LA+ G+ + V+ P+Y
Sbjct: 1 MKLLFIAAEGAPFAKTGGLGDVIGALPKSLAKNGNEIAVILPYY 44
>sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1,
chloroplastic/amyloplastic OS=Arabidopsis thaliana
GN=WAXY PE=2 SV=1
Length = 610
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M+VI + AE GPWSKTGGLGDV G LP ALA RGHRVM + P Y Y + DT + + +
Sbjct: 84 MSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIK 143
Query: 338 V 338
V
Sbjct: 144 V 144
>sp|B2TR28|GLGA_CLOBB Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B /
Type B) GN=glgA PE=3 SV=1
Length = 478
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M V+ VA+E P+ K+GGLGDVAGALPK LAR+G V VV P Y
Sbjct: 1 MRVLFVASEAHPFIKSGGLGDVAGALPKELARKGVDVRVVIPKY 44
>sp|B2V049|GLGA_CLOBA Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 /
Type E3) GN=glgA PE=3 SV=1
Length = 478
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M V+ VA+E P+ K+GGLGDVAGALPK LAR+G V VV P Y
Sbjct: 1 MRVLFVASEAHPFIKSGGLGDVAGALPKELARKGVDVRVVIPKY 44
>sp|Q1ILA0|GLGA_KORVE Glycogen synthase OS=Koribacter versatilis (strain Ellin345)
GN=glgA PE=3 SV=1
Length = 484
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323
M++ A+EC P+SKTGGL DV GA+P+ALA GH+V V P Y N
Sbjct: 1 MHIAFAASECVPFSKTGGLADVVGAVPRALAALGHKVSVYTPLYRN 46
>sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Manihot esculenta GN=WAXY PE=2 SV=1
Length = 608
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MN+I V AE GPWSKTGGLGDV G LP A+A RGHRVM V+P Y Y + DT + +
Sbjct: 82 MNLIFVGAEVGPWSKTGGLGDVLGGLPPAMAARGHRVMTVSPRYDQYKDAWDTSVSVEIK 141
Query: 338 V-DR 340
+ DR
Sbjct: 142 IGDR 145
>sp|Q3A0B8|GLGA_PELCD Glycogen synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra
Bd 1) GN=glgA PE=3 SV=1
Length = 484
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
MN++L A+E P++KTGGL DVAGALP+ L R GH V ++ P Y
Sbjct: 1 MNILLAASEVAPFAKTGGLADVAGALPQELHRLGHDVRIIMPLY 44
>sp|A6M334|GLGA_CLOB8 Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 /
NCIMB 8052) GN=glgA PE=3 SV=1
Length = 479
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321
M V+ VA+E P+ KTGGLGDVAGALPKALA++ V VV P Y
Sbjct: 1 MRVLFVASEASPFIKTGGLGDVAGALPKALAQKNADVRVVIPKY 44
>sp|A5GT38|GLGA_SYNR3 Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3
SV=1
Length = 507
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322
M ++ AAEC P K GG+GDV G+LP ALA GH V V+ P YG
Sbjct: 1 MRILFAAAECAPMVKVGGMGDVVGSLPPALAELGHDVRVIMPGYG 45
>sp|A5GKI7|GLGA_SYNPW Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3
SV=1
Length = 524
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322
M V+ AAEC P K GG+GDV G+LP ALA+ GH V ++ P YG
Sbjct: 1 MRVLFAAAECAPMVKVGGMGDVVGSLPPALAQLGHDVRLIMPGYG 45
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,899,242
Number of Sequences: 539616
Number of extensions: 5504117
Number of successful extensions: 20736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 19312
Number of HSP's gapped (non-prelim): 1446
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)