Query 018901
Match_columns 349
No_of_seqs 145 out of 1020
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 04:59:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018901.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018901hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14099 glycogen synthase; Pr 99.7 6.3E-17 1.4E-21 160.9 6.0 52 275-326 1-52 (485)
2 PRK14098 glycogen synthase; Pr 99.7 8.9E-17 1.9E-21 160.0 6.2 53 275-327 3-55 (489)
3 TIGR02095 glgA glycogen/starch 99.5 9.4E-15 2E-19 141.9 6.8 50 278-327 1-50 (473)
4 PF08323 Glyco_transf_5: Starc 99.5 8.5E-15 1.8E-19 134.0 3.9 49 279-327 1-49 (245)
5 PLN02939 transferase, transfer 99.5 1.8E-14 3.8E-19 155.5 6.5 51 275-325 479-529 (977)
6 PLN02316 synthase/transferase 99.4 2.3E-13 5E-18 148.0 8.5 54 273-326 583-636 (1036)
7 cd03791 GT1_Glycogen_synthase_ 99.4 3.6E-13 7.9E-18 129.3 6.4 49 279-327 1-49 (476)
8 PRK00654 glgA glycogen synthas 99.4 3.5E-13 7.5E-18 131.9 5.9 49 278-326 1-49 (466)
9 COG0297 GlgA Glycogen synthase 99.2 1.7E-11 3.7E-16 124.6 5.7 50 278-327 1-50 (487)
10 cd03802 GT1_AviGT4_like This f 96.4 0.0065 1.4E-07 54.3 5.8 47 278-324 1-49 (335)
11 PLN02871 UDP-sulfoquinovose:DA 96.2 0.017 3.6E-07 57.0 7.7 47 275-322 56-102 (465)
12 PRK10307 putative glycosyl tra 96.0 0.0097 2.1E-07 56.8 5.1 41 278-320 1-41 (412)
13 cd03805 GT1_ALG2_like This fam 95.7 0.018 4E-07 53.4 5.5 42 278-323 1-42 (392)
14 cd03794 GT1_wbuB_like This fam 95.0 0.03 6.4E-07 49.2 4.0 44 279-324 1-44 (394)
15 PLN02846 digalactosyldiacylgly 94.7 0.04 8.7E-07 56.6 4.8 46 276-323 3-49 (462)
16 cd03801 GT1_YqgM_like This fam 94.6 0.081 1.8E-06 45.6 5.7 45 279-325 1-45 (374)
17 cd03817 GT1_UGDG_like This fam 94.4 0.067 1.4E-06 47.1 4.8 45 279-325 1-45 (374)
18 PF13579 Glyco_trans_4_4: Glyc 94.2 0.059 1.3E-06 42.5 3.7 33 294-326 1-33 (160)
19 cd03814 GT1_like_2 This family 93.9 0.086 1.9E-06 46.7 4.6 43 279-323 1-43 (364)
20 cd03821 GT1_Bme6_like This fam 93.6 0.1 2.2E-06 45.9 4.4 44 279-324 1-44 (375)
21 cd03795 GT1_like_4 This family 93.5 0.12 2.6E-06 46.4 4.9 42 279-322 1-42 (357)
22 cd03809 GT1_mtfB_like This fam 93.4 0.12 2.7E-06 45.9 4.7 46 279-325 1-46 (365)
23 cd03796 GT1_PIG-A_like This fa 93.4 0.13 2.9E-06 49.2 5.2 43 279-323 1-43 (398)
24 cd03820 GT1_amsD_like This fam 93.2 0.2 4.3E-06 43.4 5.6 42 279-323 1-42 (348)
25 cd03823 GT1_ExpE7_like This fa 93.1 0.18 3.8E-06 44.5 5.2 45 279-324 1-45 (359)
26 cd04955 GT1_like_6 This family 92.8 0.35 7.7E-06 43.7 6.8 44 279-323 1-44 (363)
27 PF13439 Glyco_transf_4: Glyco 92.6 0.19 4.2E-06 40.3 4.3 36 290-325 8-43 (177)
28 cd04962 GT1_like_5 This family 92.5 0.15 3.3E-06 46.6 4.1 39 278-321 1-39 (371)
29 cd03825 GT1_wcfI_like This fam 92.3 0.25 5.5E-06 44.5 5.1 43 278-324 1-43 (365)
30 cd03807 GT1_WbnK_like This fam 91.6 0.32 6.9E-06 42.6 4.8 39 279-321 1-39 (365)
31 TIGR03449 mycothiol_MshA UDP-N 91.2 0.22 4.8E-06 47.0 3.8 43 280-322 1-48 (405)
32 cd03811 GT1_WabH_like This fam 90.5 0.46 1E-05 41.1 4.7 42 279-324 1-42 (353)
33 TIGR02149 glgA_Coryne glycogen 89.9 0.53 1.2E-05 43.7 4.9 42 278-321 1-42 (388)
34 cd01635 Glycosyltransferase_GT 89.2 0.54 1.2E-05 38.8 4.0 37 280-318 1-37 (229)
35 cd03808 GT1_cap1E_like This fa 89.2 0.64 1.4E-05 40.4 4.6 40 279-324 1-40 (359)
36 cd03822 GT1_ecORF704_like This 89.1 0.7 1.5E-05 41.2 4.9 42 279-323 1-42 (366)
37 cd04951 GT1_WbdM_like This fam 88.1 0.64 1.4E-05 41.8 4.0 40 279-322 1-40 (360)
38 cd03800 GT1_Sucrose_synthase T 88.0 0.62 1.3E-05 42.8 3.9 44 279-322 1-49 (398)
39 PF03033 Glyco_transf_28: Glyc 86.6 1.5 3.3E-05 35.5 5.1 27 294-320 7-35 (139)
40 TIGR01133 murG undecaprenyldip 86.6 1.2 2.7E-05 40.9 5.1 39 278-322 1-39 (348)
41 cd03812 GT1_CapH_like This fam 85.6 1 2.2E-05 40.8 3.9 41 279-323 1-41 (358)
42 PRK13609 diacylglycerol glucos 85.4 1.4 2.9E-05 42.0 4.9 44 276-324 3-46 (380)
43 PRK09922 UDP-D-galactose:(gluc 84.7 1.6 3.4E-05 41.3 4.9 42 278-322 1-44 (359)
44 cd03792 GT1_Trehalose_phosphor 83.8 1.7 3.8E-05 40.9 4.8 39 279-321 1-39 (372)
45 cd03784 GT1_Gtf_like This fami 81.8 2.6 5.6E-05 40.2 5.1 36 278-321 1-38 (401)
46 PF13477 Glyco_trans_4_2: Glyc 81.3 2.5 5.4E-05 34.1 4.2 36 279-323 1-36 (139)
47 PRK10125 putative glycosyl tra 80.9 2.9 6.2E-05 41.5 5.3 40 278-321 1-40 (405)
48 cd03798 GT1_wlbH_like This fam 79.6 3.1 6.7E-05 36.3 4.4 43 280-323 1-43 (377)
49 cd03819 GT1_WavL_like This fam 78.3 2.7 5.9E-05 38.0 3.8 34 288-321 4-37 (355)
50 cd03799 GT1_amsK_like This is 77.2 4.3 9.4E-05 36.5 4.8 40 279-323 1-40 (355)
51 TIGR02472 sucr_P_syn_N sucrose 76.4 4.8 0.0001 39.7 5.3 32 291-322 23-56 (439)
52 PRK00726 murG undecaprenyldiph 75.3 5.3 0.00012 37.5 5.0 39 278-322 2-40 (357)
53 PF01975 SurE: Survival protei 70.0 12 0.00026 34.6 5.9 41 278-325 1-41 (196)
54 PHA03003 palmytilated EEV memb 66.9 9.5 0.00021 37.9 4.9 46 278-323 230-279 (369)
55 PRK06249 2-dehydropantoate 2-r 63.3 11 0.00024 35.9 4.5 35 275-320 3-37 (313)
56 cd03818 GT1_ExpC_like This fam 62.8 9.9 0.00022 36.4 4.1 36 279-323 1-36 (396)
57 PF02951 GSH-S_N: Prokaryotic 60.8 15 0.00033 31.7 4.5 41 278-321 1-41 (119)
58 PHA03392 egt ecdysteroid UDP-g 60.0 8.2 0.00018 40.0 3.2 39 278-321 21-59 (507)
59 COG0569 TrkA K+ transport syst 59.6 12 0.00027 34.6 4.0 32 295-326 7-38 (225)
60 cd03785 GT1_MurG MurG is an N- 57.0 20 0.00044 33.1 4.9 38 279-322 1-38 (350)
61 PRK07236 hypothetical protein; 54.2 23 0.00049 34.2 4.9 34 274-318 3-36 (386)
62 COG1819 Glycosyl transferases, 53.6 13 0.00029 37.3 3.4 36 277-320 1-38 (406)
63 PF00201 UDPGT: UDP-glucoronos 51.8 7.5 0.00016 38.6 1.3 29 293-321 9-37 (500)
64 TIGR01380 glut_syn glutathione 51.4 19 0.0004 34.8 3.9 43 278-323 1-43 (312)
65 KOG1192 UDP-glucuronosyl and U 51.2 25 0.00054 34.7 4.8 40 278-324 7-46 (496)
66 KOG2130 Phosphatidylserine-spe 50.4 14 0.00031 37.9 3.0 37 98-144 321-357 (407)
67 PF13528 Glyco_trans_1_3: Glyc 49.6 28 0.0006 32.1 4.6 36 278-322 1-38 (318)
68 PRK14619 NAD(P)H-dependent gly 49.3 27 0.00059 33.3 4.6 34 276-320 3-36 (308)
69 TIGR01915 npdG NADPH-dependent 47.9 28 0.0006 31.6 4.2 28 294-321 7-34 (219)
70 PRK06718 precorrin-2 dehydroge 46.5 33 0.00072 31.4 4.5 28 295-322 17-44 (202)
71 PF03446 NAD_binding_2: NAD bi 46.3 35 0.00075 29.5 4.4 24 295-318 8-31 (163)
72 TIGR02468 sucrsPsyn_pln sucros 46.3 36 0.00078 39.2 5.6 48 275-322 167-225 (1050)
73 TIGR01007 eps_fam capsular exo 46.2 37 0.00079 29.9 4.6 36 276-317 15-52 (204)
74 PRK06753 hypothetical protein; 45.1 32 0.00069 32.6 4.3 30 278-318 1-30 (373)
75 PF03358 FMN_red: NADPH-depend 44.0 49 0.0011 27.5 4.9 40 278-320 1-40 (152)
76 PF01494 FAD_binding_3: FAD bi 43.0 41 0.00089 30.5 4.5 30 279-319 3-32 (356)
77 cd00138 PLDc Phospholipase D. 41.7 59 0.0013 27.4 5.0 46 278-325 35-80 (176)
78 PRK08163 salicylate hydroxylas 41.4 42 0.00091 32.1 4.6 31 277-318 4-34 (396)
79 PRK05246 glutathione synthetas 40.0 34 0.00075 32.8 3.8 43 278-323 2-44 (316)
80 PF06564 YhjQ: YhjQ protein; 39.2 45 0.00097 32.2 4.4 34 278-317 1-36 (243)
81 PRK06756 flavodoxin; Provision 39.1 69 0.0015 27.0 5.1 36 278-318 2-37 (148)
82 PRK08305 spoVFB dipicolinate s 38.5 71 0.0015 29.9 5.4 31 291-321 11-43 (196)
83 PRK06522 2-dehydropantoate 2-r 38.3 49 0.0011 30.5 4.3 25 295-319 7-31 (304)
84 COG0702 Predicted nucleoside-d 38.2 29 0.00063 30.7 2.7 34 290-323 3-36 (275)
85 PRK07538 hypothetical protein; 37.6 45 0.00097 32.6 4.2 30 278-318 1-30 (413)
86 PRK11064 wecC UDP-N-acetyl-D-m 37.6 46 0.001 33.6 4.4 33 276-319 2-34 (415)
87 KOG1111 N-acetylglucosaminyltr 36.5 36 0.00078 35.6 3.4 46 278-325 1-46 (426)
88 PF01972 SDH_sah: Serine dehyd 36.3 39 0.00085 33.7 3.6 32 292-323 99-130 (285)
89 COG0451 WcaG Nucleoside-diphos 36.1 33 0.00071 31.0 2.8 33 290-322 3-35 (314)
90 PRK07454 short chain dehydroge 35.9 59 0.0013 28.6 4.3 26 293-318 12-37 (241)
91 PRK12921 2-dehydropantoate 2-r 35.6 50 0.0011 30.6 4.0 31 278-319 1-31 (305)
92 PLN02662 cinnamyl-alcohol dehy 35.5 46 0.00099 30.6 3.7 26 293-318 10-35 (322)
93 PF08372 PRT_C: Plant phosphor 35.1 35 0.00075 31.1 2.8 32 83-116 41-72 (156)
94 COG1233 Phytoene dehydrogenase 35.0 53 0.0011 33.7 4.4 35 276-322 2-36 (487)
95 PRK08849 2-octaprenyl-3-methyl 34.7 60 0.0013 31.4 4.5 32 277-319 3-34 (384)
96 PLN02842 nucleotide kinase 34.1 67 0.0015 34.2 5.0 47 274-320 258-307 (505)
97 TIGR02470 sucr_synth sucrose s 33.5 56 0.0012 36.6 4.5 45 278-322 256-319 (784)
98 PRK08229 2-dehydropantoate 2-r 33.3 58 0.0012 31.0 4.1 32 278-320 3-34 (341)
99 PRK07417 arogenate dehydrogena 33.1 65 0.0014 30.3 4.4 28 295-322 7-34 (279)
100 PRK00094 gpsA NAD(P)H-dependen 32.5 66 0.0014 30.1 4.3 32 278-320 2-33 (325)
101 PRK10964 ADP-heptose:LPS hepto 31.8 84 0.0018 29.7 4.9 35 278-320 1-39 (322)
102 TIGR01426 MGT glycosyltransfer 31.7 40 0.00087 32.4 2.8 21 301-321 13-33 (392)
103 PF12076 Wax2_C: WAX2 C-termin 31.5 50 0.0011 30.7 3.2 26 292-317 3-28 (164)
104 PRK00207 sulfur transfer compl 31.5 1.2E+02 0.0025 26.2 5.3 39 278-319 1-40 (128)
105 PRK07308 flavodoxin; Validated 31.5 93 0.002 26.2 4.7 36 275-317 1-36 (146)
106 TIGR00872 gnd_rel 6-phosphoglu 30.9 76 0.0016 30.3 4.5 27 295-321 7-33 (298)
107 TIGR01777 yfcH conserved hypot 30.9 49 0.0011 29.6 3.0 30 291-320 2-31 (292)
108 TIGR03088 stp2 sugar transfera 30.8 68 0.0015 30.0 4.1 36 279-318 3-38 (374)
109 PRK15059 tartronate semialdehy 30.6 69 0.0015 30.7 4.1 24 295-318 7-30 (292)
110 PRK14618 NAD(P)H-dependent gly 30.3 80 0.0017 30.2 4.5 33 277-320 4-36 (328)
111 TIGR03219 salicylate_mono sali 29.7 72 0.0016 31.1 4.2 30 278-318 1-31 (414)
112 PF02441 Flavoprotein: Flavopr 29.7 97 0.0021 25.9 4.4 20 300-319 16-35 (129)
113 PHA02820 phospholipase-D-like 29.6 1.2E+02 0.0025 31.3 5.8 47 278-324 232-283 (424)
114 PRK12825 fabG 3-ketoacyl-(acyl 29.0 62 0.0013 27.9 3.2 27 293-319 12-38 (249)
115 PRK13982 bifunctional SbtC-lik 28.9 2.1E+02 0.0047 30.2 7.6 37 277-321 70-107 (475)
116 PF00185 OTCace: Aspartate/orn 28.7 90 0.0019 27.5 4.2 37 277-322 2-38 (158)
117 TIGR03649 ergot_EASG ergot alk 28.5 52 0.0011 30.1 2.8 29 292-320 4-32 (285)
118 PRK07588 hypothetical protein; 28.5 81 0.0018 30.4 4.2 30 278-318 1-30 (391)
119 COG2144 Selenophosphate synthe 28.5 35 0.00076 34.6 1.8 28 92-122 186-213 (324)
120 PRK11199 tyrA bifunctional cho 28.4 46 0.001 33.1 2.7 27 294-320 105-131 (374)
121 PRK08773 2-octaprenyl-3-methyl 28.4 91 0.002 30.0 4.6 34 275-319 4-37 (392)
122 PF13460 NAD_binding_10: NADH( 28.3 70 0.0015 26.9 3.4 32 292-323 3-34 (183)
123 PF08659 KR: KR domain; Inter 28.3 47 0.001 29.1 2.4 32 290-321 3-34 (181)
124 PLN02572 UDP-sulfoquinovose sy 28.3 93 0.002 31.5 4.8 26 292-317 52-77 (442)
125 PF07736 CM_1: Chorismate muta 28.2 52 0.0011 29.0 2.6 27 81-118 10-36 (118)
126 PRK08655 prephenate dehydrogen 28.2 74 0.0016 32.5 4.1 27 294-320 7-33 (437)
127 PRK09134 short chain dehydroge 27.8 1.3E+02 0.0029 26.8 5.2 25 294-318 16-40 (258)
128 PLN02695 GDP-D-mannose-3',5'-e 27.6 1.3E+02 0.0028 29.4 5.5 32 277-318 21-52 (370)
129 PRK07679 pyrroline-5-carboxyla 27.5 97 0.0021 29.1 4.5 34 275-319 1-38 (279)
130 COG2084 MmsB 3-hydroxyisobutyr 27.3 77 0.0017 31.3 3.9 29 295-323 7-35 (286)
131 PRK09271 flavodoxin; Provision 27.1 1.4E+02 0.003 26.0 5.1 35 278-317 1-35 (160)
132 COG3349 Uncharacterized conser 27.1 79 0.0017 33.7 4.1 32 278-320 1-32 (485)
133 PRK05732 2-octaprenyl-6-methox 27.1 91 0.002 29.7 4.3 34 275-319 1-37 (395)
134 PRK09739 hypothetical protein; 27.1 1.7E+02 0.0037 26.1 5.8 40 276-318 2-41 (199)
135 PRK10916 ADP-heptose:LPS hepto 27.0 79 0.0017 30.3 3.9 36 278-321 1-40 (348)
136 PRK05868 hypothetical protein; 26.9 93 0.002 30.3 4.4 30 278-318 2-31 (372)
137 PRK05993 short chain dehydroge 26.8 1.1E+02 0.0024 28.0 4.6 26 294-319 11-36 (277)
138 PRK07045 putative monooxygenas 26.8 94 0.002 29.9 4.3 32 276-318 4-35 (388)
139 PRK06719 precorrin-2 dehydroge 26.6 1.2E+02 0.0025 26.8 4.6 35 277-322 13-47 (157)
140 TIGR01963 PHB_DH 3-hydroxybuty 26.4 67 0.0014 28.1 3.0 28 292-319 6-33 (255)
141 PLN00198 anthocyanidin reducta 26.3 73 0.0016 29.9 3.5 26 293-318 15-40 (338)
142 PRK12829 short chain dehydroge 26.2 61 0.0013 28.6 2.8 25 294-318 18-42 (264)
143 PLN02686 cinnamoyl-CoA reducta 26.1 71 0.0015 31.1 3.4 26 293-318 59-84 (367)
144 CHL00194 ycf39 Ycf39; Provisio 26.0 67 0.0015 30.2 3.1 27 293-319 6-32 (317)
145 PRK10446 ribosomal protein S6 25.8 1.1E+02 0.0024 28.9 4.6 35 278-320 1-35 (300)
146 PLN02256 arogenate dehydrogena 25.6 1.2E+02 0.0026 29.6 4.9 35 276-321 35-69 (304)
147 PRK09730 putative NAD(P)-bindi 25.6 76 0.0017 27.6 3.2 29 292-320 6-34 (247)
148 PRK10675 UDP-galactose-4-epime 25.4 65 0.0014 29.9 2.9 27 292-318 5-31 (338)
149 PRK09599 6-phosphogluconate de 25.4 1.1E+02 0.0023 29.2 4.4 26 295-320 7-32 (301)
150 KOG2646 Ribosomal protein S5 [ 25.1 42 0.00092 34.8 1.7 23 89-116 311-333 (396)
151 PRK07364 2-octaprenyl-6-methox 25.1 1.5E+02 0.0032 28.7 5.3 31 277-318 18-48 (415)
152 COG0287 TyrA Prephenate dehydr 25.0 62 0.0014 31.5 2.8 24 294-317 9-32 (279)
153 PRK06475 salicylate hydroxylas 24.8 93 0.002 30.3 4.0 31 278-319 3-33 (400)
154 PRK08850 2-octaprenyl-6-methox 24.8 1.1E+02 0.0023 29.8 4.4 32 278-320 5-36 (405)
155 PRK09004 FMN-binding protein M 24.7 1.3E+02 0.0029 26.0 4.6 36 275-317 1-36 (146)
156 PF13450 NAD_binding_8: NAD(P) 24.7 1E+02 0.0022 23.4 3.4 23 294-318 4-26 (68)
157 PRK08105 flavodoxin; Provision 24.7 1.3E+02 0.0029 26.1 4.5 27 292-318 11-37 (149)
158 cd03816 GT1_ALG1_like This fam 24.5 1.3E+02 0.0029 29.5 5.1 40 278-323 4-43 (415)
159 PRK06849 hypothetical protein; 23.9 1.2E+02 0.0026 29.7 4.6 35 276-320 3-37 (389)
160 TIGR01754 flav_RNR ribonucleot 23.9 1.5E+02 0.0033 24.9 4.7 34 278-316 1-34 (140)
161 smart00642 Aamy Alpha-amylase 23.6 1.2E+02 0.0025 27.1 4.0 32 293-325 15-46 (166)
162 TIGR02360 pbenz_hydroxyl 4-hyd 23.2 1.2E+02 0.0025 29.8 4.3 30 278-318 3-32 (390)
163 PRK09496 trkA potassium transp 23.2 1E+02 0.0023 30.2 4.0 27 295-321 7-33 (453)
164 PRK09126 hypothetical protein; 23.2 1.2E+02 0.0026 29.0 4.3 29 278-317 4-32 (392)
165 PRK07231 fabG 3-ketoacyl-(acyl 23.2 79 0.0017 27.6 2.9 26 293-318 11-36 (251)
166 PF13241 NAD_binding_7: Putati 23.2 73 0.0016 25.8 2.5 25 297-321 16-40 (103)
167 TIGR03466 HpnA hopanoid-associ 23.1 71 0.0015 29.1 2.6 28 291-318 4-31 (328)
168 PRK06194 hypothetical protein; 22.8 87 0.0019 28.4 3.1 26 293-318 12-37 (287)
169 PRK06129 3-hydroxyacyl-CoA deh 22.7 1.3E+02 0.0029 28.7 4.5 27 295-321 9-35 (308)
170 PRK08013 oxidoreductase; Provi 22.6 1.2E+02 0.0027 29.5 4.4 31 277-318 3-33 (400)
171 PLN02688 pyrroline-5-carboxyla 22.4 1.3E+02 0.0028 27.6 4.2 23 295-317 7-33 (266)
172 PRK08063 enoyl-(acyl carrier p 22.2 93 0.002 27.3 3.1 27 292-318 9-35 (250)
173 PRK04155 chaperone protein Hch 22.2 3.7E+02 0.008 26.4 7.5 44 278-321 50-100 (287)
174 PLN02650 dihydroflavonol-4-red 22.1 1E+02 0.0022 29.3 3.5 28 291-318 9-36 (351)
175 PLN02927 antheraxanthin epoxid 22.1 1.2E+02 0.0025 33.4 4.4 32 276-318 80-111 (668)
176 PRK07774 short chain dehydroge 22.1 91 0.002 27.4 3.0 27 292-318 11-37 (250)
177 PRK05708 2-dehydropantoate 2-r 22.0 1.3E+02 0.0027 29.0 4.2 33 277-320 2-34 (305)
178 PRK12429 3-hydroxybutyrate deh 22.0 89 0.0019 27.4 3.0 27 292-318 9-35 (258)
179 PRK06101 short chain dehydroge 22.0 86 0.0019 27.8 2.9 26 293-318 7-32 (240)
180 PRK09135 pteridine reductase; 22.0 98 0.0021 26.9 3.2 29 292-320 11-39 (249)
181 PRK02255 putrescine carbamoylt 22.0 1.4E+02 0.0029 30.0 4.5 35 277-321 154-188 (338)
182 PRK06180 short chain dehydroge 21.8 86 0.0019 28.6 2.9 26 293-318 10-35 (277)
183 COG0654 UbiH 2-polyprenyl-6-me 21.8 1.3E+02 0.0028 29.4 4.2 32 278-320 3-34 (387)
184 TIGR00661 MJ1255 conserved hyp 21.7 1.5E+02 0.0032 28.1 4.6 27 292-319 8-35 (321)
185 PRK13608 diacylglycerol glucos 21.6 1.7E+02 0.0038 28.6 5.2 31 277-312 5-35 (391)
186 CHL00175 minD septum-site dete 21.5 1.7E+02 0.0038 27.1 4.9 34 278-317 15-50 (281)
187 PRK08017 oxidoreductase; Provi 21.5 92 0.002 27.5 3.0 29 291-319 6-34 (256)
188 COG0857 Pta BioD-like N-termin 21.3 1.6E+02 0.0035 29.9 5.0 40 278-321 2-41 (354)
189 PRK06138 short chain dehydroge 21.3 93 0.002 27.3 2.9 27 292-318 10-36 (252)
190 PRK05557 fabG 3-ketoacyl-(acyl 21.2 1E+02 0.0022 26.6 3.1 26 293-318 11-36 (248)
191 PRK06184 hypothetical protein; 21.2 1.4E+02 0.003 30.3 4.5 31 277-318 3-33 (502)
192 PRK07814 short chain dehydroge 21.2 90 0.0019 28.1 2.9 26 293-318 16-41 (263)
193 TIGR02700 flavo_MJ0208 archaeo 21.2 1.1E+02 0.0024 28.6 3.6 29 292-320 6-38 (234)
194 PLN02253 xanthoxin dehydrogena 21.1 92 0.002 28.2 2.9 25 294-318 25-49 (280)
195 TIGR00715 precor6x_red precorr 21.0 1.6E+02 0.0034 28.4 4.6 25 294-319 7-31 (256)
196 PF00551 Formyl_trans_N: Formy 21.0 1.5E+02 0.0032 26.4 4.1 37 278-323 1-39 (181)
197 PRK12490 6-phosphogluconate de 21.0 1.4E+02 0.0031 28.4 4.3 26 295-320 7-32 (299)
198 TIGR01830 3oxo_ACP_reduc 3-oxo 20.9 1E+02 0.0022 26.6 3.1 27 292-318 3-29 (239)
199 PRK05565 fabG 3-ketoacyl-(acyl 20.9 99 0.0022 26.8 3.0 24 294-317 12-35 (247)
200 PRK07208 hypothetical protein; 20.9 1.4E+02 0.0031 29.6 4.5 39 275-324 2-42 (479)
201 PRK08267 short chain dehydroge 20.9 1.5E+02 0.0032 26.5 4.2 26 293-318 7-32 (260)
202 TIGR03026 NDP-sugDHase nucleot 20.8 1.1E+02 0.0023 30.6 3.6 28 295-322 7-34 (411)
203 PLN02986 cinnamyl-alcohol dehy 20.8 1E+02 0.0022 28.7 3.2 27 292-318 10-36 (322)
204 PLN02240 UDP-glucose 4-epimera 20.8 91 0.002 29.2 2.9 26 293-318 11-36 (352)
205 COG4635 HemG Flavodoxin [Energ 20.7 1.7E+02 0.0037 27.6 4.6 35 278-317 1-35 (175)
206 PLN02583 cinnamoyl-CoA reducta 20.7 99 0.0021 28.9 3.1 28 292-319 11-38 (297)
207 COG0078 ArgF Ornithine carbamo 20.5 1.5E+02 0.0033 30.0 4.6 35 276-320 152-186 (310)
208 PRK12831 putative oxidoreducta 20.5 2.2E+02 0.0047 29.1 5.7 33 275-318 138-170 (464)
209 PRK14805 ornithine carbamoyltr 20.4 1.3E+02 0.0028 29.6 4.0 36 276-321 146-181 (302)
210 PRK06847 hypothetical protein; 20.3 1.6E+02 0.0034 28.0 4.4 29 278-317 5-33 (375)
211 PF01256 Carb_kinase: Carbohyd 20.2 1.2E+02 0.0025 28.9 3.5 32 281-312 172-203 (242)
212 PLN02989 cinnamyl-alcohol dehy 20.2 1.2E+02 0.0025 28.3 3.5 27 292-318 10-36 (325)
213 PRK09072 short chain dehydroge 20.1 1E+02 0.0022 27.7 2.9 26 293-318 11-36 (263)
No 1
>PRK14099 glycogen synthase; Provisional
Probab=99.66 E-value=6.3e-17 Score=160.94 Aligned_cols=52 Identities=44% Similarity=0.597 Sum_probs=49.7
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCC
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e 326 (349)
|++|||||||+||+||+||||||||+++||++|+++||+|+||||+|++++.
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~ 52 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLA 52 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhh
Confidence 5679999999999999999999999999999999999999999999999963
No 2
>PRK14098 glycogen synthase; Provisional
Probab=99.65 E-value=8.9e-17 Score=160.04 Aligned_cols=53 Identities=25% Similarity=0.570 Sum_probs=50.1
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCCc
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP 327 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e~ 327 (349)
.+.|||||||+||+||+||||||||+++||+||+++||+|+||||+|+++.++
T Consensus 3 ~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~ 55 (489)
T PRK14098 3 RRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDR 55 (489)
T ss_pred CCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhh
Confidence 45599999999999999999999999999999999999999999999999753
No 3
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.53 E-value=9.4e-15 Score=141.95 Aligned_cols=50 Identities=58% Similarity=0.911 Sum_probs=48.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCCc
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP 327 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e~ 327 (349)
|||||||+|++||+|+||||||+++||++|+++||+|+||||+|+++...
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~ 50 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDE 50 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhh
Confidence 89999999999999999999999999999999999999999999998654
No 4
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.51 E-value=8.5e-15 Score=133.99 Aligned_cols=49 Identities=51% Similarity=0.969 Sum_probs=41.9
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCCc
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP 327 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e~ 327 (349)
||||||+||.||+|+||||||+++||++|+++||+|+||||+|+++.+.
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~ 49 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEE 49 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHH
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhh
Confidence 7999999999999999999999999999999999999999999988654
No 5
>PLN02939 transferase, transferring glycosyl groups
Probab=99.50 E-value=1.8e-14 Score=155.48 Aligned_cols=51 Identities=39% Similarity=0.670 Sum_probs=49.2
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
.++|||||||+||+||+||||||||+++||+||+++||+|+||||+|+++.
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~ 529 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQ 529 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccC
Confidence 566999999999999999999999999999999999999999999999986
No 6
>PLN02316 synthase/transferase
Probab=99.43 E-value=2.3e-13 Score=148.01 Aligned_cols=54 Identities=33% Similarity=0.564 Sum_probs=50.4
Q ss_pred CCCCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCC
Q 018901 273 AGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326 (349)
Q Consensus 273 a~~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e 326 (349)
++.++|+|||||+||+||+|+||||||+++||++|+++||+|+||||+|+++..
T Consensus 583 ~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~ 636 (1036)
T PLN02316 583 AKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNL 636 (1036)
T ss_pred CCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccch
Confidence 346779999999999999999999999999999999999999999999998754
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.39 E-value=3.6e-13 Score=129.33 Aligned_cols=49 Identities=57% Similarity=0.993 Sum_probs=47.0
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCCc
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP 327 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e~ 327 (349)
||||||+|++||+|+||||||+++||++|+++||+|+||||+|+++...
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~ 49 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDE 49 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhH
Confidence 6999999999999999999999999999999999999999999998654
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.39 E-value=3.5e-13 Score=131.86 Aligned_cols=49 Identities=59% Similarity=0.955 Sum_probs=47.3
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e 326 (349)
|||||||+|++||+|+||||||+++||++|+++||+|+||||+|+++..
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~ 49 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIRE 49 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhh
Confidence 8999999999999999999999999999999999999999999998753
No 9
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.7e-11 Score=124.63 Aligned_cols=50 Identities=52% Similarity=0.818 Sum_probs=47.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCCc
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP 327 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e~ 327 (349)
||||+||+|++||+|+||||||+++||++|+++|++|+|+||.|+.+.+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~ 50 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKE 50 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhh
Confidence 89999999999999999999999999999999999999999999966544
No 10
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.41 E-value=0.0065 Score=54.31 Aligned_cols=47 Identities=34% Similarity=0.434 Sum_probs=42.3
Q ss_pred ceEEEEeccccc--ccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 278 MNVILVAAECGP--WSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 278 mkILfVSsE~aP--faKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||++|+..+.| --..||..-++..|.++|.++||+|.|+.|.....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~ 49 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKT 49 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCc
Confidence 899999999876 56789999999999999999999999999887643
No 11
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.18 E-value=0.017 Score=57.01 Aligned_cols=47 Identities=23% Similarity=0.333 Sum_probs=42.7
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
.++|||++++ |..||...||.+..+..|.++|.++||+|.|+.+..+
T Consensus 56 ~~~mrI~~~~-~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~ 102 (465)
T PLN02871 56 SRPRRIALFV-EPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEG 102 (465)
T ss_pred CCCceEEEEE-CCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 6679999886 8889999999999999999999999999999998654
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=96.02 E-value=0.0097 Score=56.78 Aligned_cols=41 Identities=29% Similarity=0.554 Sum_probs=38.5
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
||||+|+..+.|- .||.+..+..|.++|.++||+|+|+.|.
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~ 41 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAP 41 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecC
Confidence 7999999999997 6899999999999999999999999965
No 13
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=95.74 E-value=0.018 Score=53.38 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=36.9
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||||||. |....||..=++..|.++|+++||+|.|+++.++.
T Consensus 1 mkIl~~~----~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~ 42 (392)
T cd03805 1 LRVAFIH----PDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDP 42 (392)
T ss_pred CeEEEEC----CCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCc
Confidence 7999996 45568999999999999999999999999986543
No 14
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.99 E-value=0.03 Score=49.17 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=39.2
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||||+.-+.|.. ||.+..+..|.++|+++||+|.++.+.....
T Consensus 1 kIl~i~~~~~~~~--~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~ 44 (394)
T cd03794 1 KILILSQYFPPEL--GGGAFRTTELAEELVKRGHEVTVITGSPNYP 44 (394)
T ss_pred CEEEEecccCCcc--CCcceeHHHHHHHHHhCCceEEEEecCCCcc
Confidence 6999999888866 9999999999999999999999999876543
No 15
>PLN02846 digalactosyldiacylglycerol synthase
Probab=94.72 E-value=0.04 Score=56.61 Aligned_cols=46 Identities=20% Similarity=0.285 Sum_probs=42.1
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCC-CeEEEEecCCCC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG-HRVMVVAPHYGN 323 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G-~dVrVimPrYg~ 323 (349)
++|||+++|--+.|+ .+|.+-.+.-+...|+++| |+|.||.|.|..
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~ 49 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSL 49 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCcc
Confidence 469999999999999 7899999999999999999 899999999963
No 16
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=94.60 E-value=0.081 Score=45.58 Aligned_cols=45 Identities=38% Similarity=0.575 Sum_probs=41.1
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
||++++....|. .||.+.++..|.++|.+.||+|.++.+......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~ 45 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLP 45 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCC
Confidence 699999998888 999999999999999999999999999876553
No 17
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=94.40 E-value=0.067 Score=47.10 Aligned_cols=45 Identities=29% Similarity=0.466 Sum_probs=40.3
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
|||+++..+.|. .||.+..+..|.++|+++||+|.|+.|.+....
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~ 45 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAP 45 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCC
Confidence 689999988775 699999999999999999999999999887653
No 18
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.18 E-value=0.059 Score=42.52 Aligned_cols=33 Identities=39% Similarity=0.613 Sum_probs=26.4
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEecCCCCCCC
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e 326 (349)
||++-++..|.++|+++||+|+|+.|.+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~ 33 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDD 33 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCccc
Confidence 899999999999999999999999999876643
No 19
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.94 E-value=0.086 Score=46.70 Aligned_cols=43 Identities=28% Similarity=0.362 Sum_probs=38.8
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||+|+..+.|.. ||.+..+..|.++|+++||+|.|+.+....
T Consensus 1 kIl~i~~~~~p~~--~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~ 43 (364)
T cd03814 1 RIAIVTDTFLPQV--NGVVRTLQRLVEHLRARGHEVLVIAPGPFR 43 (364)
T ss_pred CeEEEecccCccc--cceehHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 6999999888864 999999999999999999999999987653
No 20
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=93.63 E-value=0.1 Score=45.85 Aligned_cols=44 Identities=34% Similarity=0.413 Sum_probs=38.7
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||+|+..+. -..||...++..|.++|++.||+|.|+.+.....
T Consensus 1 kIl~i~~~~~--~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~ 44 (375)
T cd03821 1 KILHVIPSFD--PKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGD 44 (375)
T ss_pred CeEEEcCCCC--cccCCeehHHHHHHHHHHhcCCcEEEEecCCCCc
Confidence 6899998776 4589999999999999999999999999886653
No 21
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.51 E-value=0.12 Score=46.37 Aligned_cols=42 Identities=31% Similarity=0.379 Sum_probs=38.6
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|||+|+..+.|. .||.+.++..|.++|.++||+|.|+.+.-.
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPE 42 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 699999988887 899999999999999999999999988654
No 22
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=93.42 E-value=0.12 Score=45.88 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=41.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
|||+++.-..|. ..||.+.++..|.++|++.||+|.++++......
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~ 46 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGL 46 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 688888888887 8899999999999999999999999999987554
No 23
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=93.38 E-value=0.13 Score=49.16 Aligned_cols=43 Identities=33% Similarity=0.553 Sum_probs=39.1
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||++|+.=+.|. .||..-.+..|.++|+++||+|.|++|.++.
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~ 43 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGN 43 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCc
Confidence 689999888895 6999999999999999999999999997653
No 24
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=93.25 E-value=0.2 Score=43.37 Aligned_cols=42 Identities=31% Similarity=0.583 Sum_probs=38.2
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||++++....| .||..-++..|.++|++.||+|.|+.+....
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~ 42 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE 42 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC
Confidence 68999987766 8999999999999999999999999998775
No 25
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=93.11 E-value=0.18 Score=44.50 Aligned_cols=45 Identities=33% Similarity=0.441 Sum_probs=39.0
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||||+.-..|. ..||..-++..|.++|+++||+|.|+.+.....
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~ 45 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPP 45 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCC
Confidence 689999877775 478999999999999999999999999876544
No 26
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.84 E-value=0.35 Score=43.67 Aligned_cols=44 Identities=25% Similarity=0.334 Sum_probs=37.9
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||++|+.+.+|- ..||...++..|.++|+++||+|.|+.+.-..
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~ 44 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYP 44 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCC
Confidence 688998887654 46999999999999999999999999987543
No 27
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=92.58 E-value=0.19 Score=40.26 Aligned_cols=36 Identities=39% Similarity=0.545 Sum_probs=29.9
Q ss_pred ccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 290 WSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 290 faKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
+...||.+-++..|.++|+++||+|.|+.|......
T Consensus 8 ~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~ 43 (177)
T PF13439_consen 8 LPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPI 43 (177)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-
T ss_pred CCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccc
Confidence 345899999999999999999999999999987654
No 28
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.55 E-value=0.15 Score=46.62 Aligned_cols=39 Identities=46% Similarity=0.592 Sum_probs=34.3
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|||++++ .|. .||..-++..|.++|+++||+|.|+....
T Consensus 1 mki~~~~---~p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~ 39 (371)
T cd04962 1 MKIGIVC---YPT--YGGSGVVATELGKALARRGHEVHFITSSR 39 (371)
T ss_pred CceeEEE---EeC--CCCccchHHHHHHHHHhcCCceEEEecCC
Confidence 7999997 353 59999999999999999999999998753
No 29
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=92.26 E-value=0.25 Score=44.49 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=37.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||||++.- ...||.+-++..|.++|.++||+|.|+.+....+
T Consensus 1 MkIl~~~~~----~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~~~ 43 (365)
T cd03825 1 MKVLHLNTS----DISGGAARAAYRLHRALQAAGVDSTMLVQEKKAL 43 (365)
T ss_pred CeEEEEecC----CCCCcHHHHHHHHHHHHHhcCCceeEEEeecchh
Confidence 899999763 3559999999999999999999999999876533
No 30
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=91.59 E-value=0.32 Score=42.57 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=35.4
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
||++|...+.+ ||.+.++..|.++|.+.|++|.++...-
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~ 39 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTD 39 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCc
Confidence 68999998876 9999999999999999999999998753
No 31
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=91.22 E-value=0.22 Score=47.00 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=36.5
Q ss_pred EEEEeccccccc-----ccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 280 VILVAAECGPWS-----KTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 280 ILfVSsE~aPfa-----KtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|++|+-...|+. ..||..-.+..|.++|.++||+|.|+.+.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~ 48 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATR 48 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccC
Confidence 567777777754 5799999999999999999999999998754
No 32
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=90.48 E-value=0.46 Score=41.05 Aligned_cols=42 Identities=26% Similarity=0.362 Sum_probs=36.7
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
||||++.... .||...++..|.++|.+.||+|.|+.+.....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~ 42 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGD 42 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCc
Confidence 6888888654 79999999999999999999999999876654
No 33
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=89.85 E-value=0.53 Score=43.74 Aligned_cols=42 Identities=31% Similarity=0.278 Sum_probs=35.6
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|||++|+..+.|. ..||.+..+..|.++|.++ ++|.|+....
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~ 42 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGD 42 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCC
Confidence 8999999988776 5699999999999999987 7777777543
No 34
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.19 E-value=0.54 Score=38.78 Aligned_cols=37 Identities=51% Similarity=0.640 Sum_probs=32.5
Q ss_pred EEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 280 VILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 280 ILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|++++....| ..||.+-++..|.++|.++||+|.|+.
T Consensus 1 i~~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 1 ILLVSTPLLP--GGGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CeeeccccCC--CCCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 5667776666 689999999999999999999999998
No 35
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=89.17 E-value=0.64 Score=40.44 Aligned_cols=40 Identities=33% Similarity=0.373 Sum_probs=35.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
|||+|+.. .||....+..|.++|.++||+|.|+.+.-...
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~ 40 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDEL 40 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCcc
Confidence 68999886 78999999999999999999999999876543
No 36
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=89.08 E-value=0.7 Score=41.16 Aligned_cols=42 Identities=29% Similarity=0.366 Sum_probs=35.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||+||+. ..|. .||...++..|.++|.+.||+|.|+......
T Consensus 1 kI~~v~~-~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~ 42 (366)
T cd03822 1 RIALVSP-YPPR--KCGIATFTTDLVNALSARGPDVLVVSVAALY 42 (366)
T ss_pred CeEEecC-CCCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeeccc
Confidence 6899975 3444 7999999999999999999999999876543
No 37
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=88.09 E-value=0.64 Score=41.83 Aligned_cols=40 Identities=18% Similarity=0.313 Sum_probs=34.3
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|||++++.. ..||..-++..|.++|.++||+|.|+.+.-+
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 40 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGE 40 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCC
Confidence 588887654 6799999999999999999999999986543
No 38
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=87.99 E-value=0.62 Score=42.81 Aligned_cols=44 Identities=30% Similarity=0.446 Sum_probs=35.0
Q ss_pred eEEEEecccccccc-----cccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 279 NVILVAAECGPWSK-----TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 279 kILfVSsE~aPfaK-----tGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
||+|+..=.+|+.. .||..-++..|.++|+++||+|.|+.+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~ 49 (398)
T cd03800 1 RIALISLHGSPLAQPGGADTGGQNVYVLELARALARLGHEVDIFTRRID 49 (398)
T ss_pred CeEEEeccccccccCCCCCCCceeehHHHHHHHHhccCceEEEEEecCC
Confidence 46666655555544 579999999999999999999999987654
No 39
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=86.65 E-value=1.5 Score=35.50 Aligned_cols=27 Identities=48% Similarity=0.684 Sum_probs=21.2
Q ss_pred ccHHHHH--hHHHHHHHHCCCeEEEEecC
Q 018901 294 GGLGDVA--GALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 294 GGLgDVv--~sLPkAL~~~G~dVrVimPr 320 (349)
|.-|||- -+|.++|+++||+|++..+.
T Consensus 7 Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred CChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 6677774 56778999999999998875
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=86.60 E-value=1.2 Score=40.90 Aligned_cols=39 Identities=31% Similarity=0.367 Sum_probs=30.5
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|||++++.|. ||--..+..|.++|.++||+|.|+.+.++
T Consensus 1 ~~i~~~~g~~------~g~~~~~~~La~~L~~~g~eV~vv~~~~~ 39 (348)
T TIGR01133 1 KKVVLAAGGT------GGHIFPALAVAEELIKRGVEVLWLGTKRG 39 (348)
T ss_pred CeEEEEeCcc------HHHHhHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 6899999875 33333556899999999999999987554
No 41
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=85.60 E-value=1 Score=40.79 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=36.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||+++.-+ ..||..-.+..|.++|.+.||+|.++++....
T Consensus 1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~ 41 (358)
T cd03812 1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEE 41 (358)
T ss_pred CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCC
Confidence 688888855 78999999999999999999999999998654
No 42
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=85.43 E-value=1.4 Score=41.96 Aligned_cols=44 Identities=20% Similarity=0.378 Sum_probs=38.3
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
+.||||++|+-+ .+|..-.+.+|.++|.++|++|.++.|.|...
T Consensus 3 ~~~rili~t~~~-----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~ 46 (380)
T PRK13609 3 KNPKVLILTAHY-----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGES 46 (380)
T ss_pred CCCeEEEEEcCC-----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhc
Confidence 347999999976 45999999999999999999999999998644
No 43
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=84.73 E-value=1.6 Score=41.31 Aligned_cols=42 Identities=10% Similarity=0.222 Sum_probs=35.8
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHC--CCeEEEEecCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR--GHRVMVVAPHYG 322 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~--G~dVrVimPrYg 322 (349)
|||+|++. ..| ..||..-++..|.++|.++ |++|.|+.|...
T Consensus 1 mkI~~~~~-~~~--~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~ 44 (359)
T PRK09922 1 MKIAFIGE-AVS--GFGGMETVISNVINTFEESKINCEMFFFCRNDK 44 (359)
T ss_pred CeeEEecc-ccc--CCCchhHHHHHHHHHhhhcCcceeEEEEecCCC
Confidence 89999975 333 4599999999999999999 899999998654
No 44
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=83.84 E-value=1.7 Score=40.91 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=34.0
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
||||++.=+ ..||..-++..|.++|.+.||+|.+++|.=
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~ 39 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKG 39 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCC
Confidence 588887643 579999999999999999999999999853
No 45
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=81.82 E-value=2.6 Score=40.18 Aligned_cols=36 Identities=42% Similarity=0.554 Sum_probs=29.2
Q ss_pred ceEEEEecccccccccccHHHHH--hHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv--~sLPkAL~~~G~dVrVimPrY 321 (349)
|||||++. |+.|++. -.|.++|+++||+|+++.+.+
T Consensus 1 mrIl~~~~--------p~~GHv~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 1 MRVLITTI--------GSRGDVQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred CeEEEEeC--------CCcchHHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 79999987 5666665 466788899999999999874
No 46
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=81.25 E-value=2.5 Score=34.08 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=29.7
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||+|+....+| +..+.++|+++|++|.|+.+..+.
T Consensus 1 KIl~i~~~~~~~---------~~~~~~~L~~~g~~V~ii~~~~~~ 36 (139)
T PF13477_consen 1 KILLIGNTPSTF---------IYNLAKELKKRGYDVHIITPRNDY 36 (139)
T ss_pred CEEEEecCcHHH---------HHHHHHHHHHCCCEEEEEEcCCCc
Confidence 689998877554 678899999999999999996554
No 47
>PRK10125 putative glycosyl transferase; Provisional
Probab=80.94 E-value=2.9 Score=41.49 Aligned_cols=40 Identities=23% Similarity=0.181 Sum_probs=36.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
||||+|-. -+..||-+-++..|.+.|.++||+|.|+.=+-
T Consensus 1 mkil~i~~----~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~ 40 (405)
T PRK10125 1 MNILQFNV----RLAEGGAAGVALDLHQRALQQGLASHFVYGYG 40 (405)
T ss_pred CeEEEEEe----eecCCchhHHHHHHHHHHHhcCCeEEEEEecC
Confidence 89999988 56779999999999999999999999988753
No 48
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=79.61 E-value=3.1 Score=36.26 Aligned_cols=43 Identities=33% Similarity=0.471 Sum_probs=34.0
Q ss_pred EEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 280 VILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 280 ILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
||+++. .+|....||.+-++..|.++|++.||+|.|+.+.-..
T Consensus 1 iLii~~-~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~ 43 (377)
T cd03798 1 ILVISS-LYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWG 43 (377)
T ss_pred CeEecc-CCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCC
Confidence 455555 3444356999999999999999999999999986543
No 49
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=78.29 E-value=2.7 Score=38.02 Aligned_cols=34 Identities=32% Similarity=0.434 Sum_probs=29.7
Q ss_pred ccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 288 GPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 288 aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
.|-+..||...++..|.++|+++||+|.|+.+..
T Consensus 4 ~~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~ 37 (355)
T cd03819 4 LPALESGGVERGTLELARALVERGHRSLVASAGG 37 (355)
T ss_pred chhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 3555669999999999999999999999998753
No 50
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=77.16 E-value=4.3 Score=36.47 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=32.1
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||||+..+-|. -.-++..+-.+|.++||+|.|+.+....
T Consensus 1 ki~~~~~~~~~~-----~~~~~~~~~~~L~~~g~~v~v~~~~~~~ 40 (355)
T cd03799 1 KIAYLVKEFPRL-----SETFILREILALEAAGHEVEIFSLRPPE 40 (355)
T ss_pred CEEEECCCCCCc-----chHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 689998765333 4467888899999999999999988764
No 51
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=76.39 E-value=4.8 Score=39.70 Aligned_cols=32 Identities=34% Similarity=0.405 Sum_probs=28.5
Q ss_pred cccccHHHHHhHHHHHHHHCCC--eEEEEecCCC
Q 018901 291 SKTGGLGDVAGALPKALARRGH--RVMVVAPHYG 322 (349)
Q Consensus 291 aKtGGLgDVv~sLPkAL~~~G~--dVrVimPrYg 322 (349)
-..||..-.+..|.++|+++|| +|.|+++.|.
T Consensus 23 p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~ 56 (439)
T TIGR02472 23 ADTGGQTKYVLELARALARRSEVEQVDLVTRLIK 56 (439)
T ss_pred CCCCCcchHHHHHHHHHHhCCCCcEEEEEecccc
Confidence 4579999999999999999997 9999997654
No 52
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=75.27 E-value=5.3 Score=37.46 Aligned_cols=39 Identities=28% Similarity=0.389 Sum_probs=31.8
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|||++++.+. ||---++..|.++|+++||+|.|+.+.++
T Consensus 2 ~~i~i~~~g~------gG~~~~~~~la~~L~~~g~ev~vv~~~~~ 40 (357)
T PRK00726 2 KKILLAGGGT------GGHVFPALALAEELKKRGWEVLYLGTARG 40 (357)
T ss_pred cEEEEEcCcc------hHhhhHHHHHHHHHHhCCCEEEEEECCCc
Confidence 8999988743 55555677999999999999999998664
No 53
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=70.02 E-value=12 Score=34.57 Aligned_cols=41 Identities=37% Similarity=0.449 Sum_probs=28.0
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
||||..--- |=-+-=.++|-++|.+.||+|.|+.|...+--
T Consensus 1 M~ILlTNDD-------Gi~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg 41 (196)
T PF01975_consen 1 MRILLTNDD-------GIDAPGIRALAKALSALGHDVVVVAPDSEQSG 41 (196)
T ss_dssp SEEEEE-SS--------TTSHHHHHHHHHHTTTSSEEEEEEESSSTTT
T ss_pred CeEEEEcCC-------CCCCHHHHHHHHHHHhcCCeEEEEeCCCCCcC
Confidence 566655432 22334567888888888999999999987543
No 54
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional
Probab=66.88 E-value=9.5 Score=37.90 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=36.0
Q ss_pred ceEEEEecccccccccccH----HHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGL----GDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGL----gDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
.+|.+.+.-+.|....+.. ..+..+|-.|.+++|++|||++|.++.
T Consensus 230 ~~I~I~t~yf~P~~~~d~~~~~~~~i~~AL~~AAa~RGV~VRILv~~~~~ 279 (369)
T PHA03003 230 KSIDLELLSLVPVIREDDKTTYWPDIYNALIRAAINRGVKVRLLVGSWKK 279 (369)
T ss_pred hEEEEEEeccccEEeeCCCCccHHHHHHHHHHHHHcCCCEEEEEEecCCc
Confidence 4788888888887665654 367777777777899999999998654
No 55
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=63.25 E-value=11 Score=35.87 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=27.8
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
++.|+|++| |.|-+-+.|...|++.||+|.++...
T Consensus 3 ~~~m~I~Ii-----------G~GaiG~~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGII-----------GTGAIGGFYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEE-----------CCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 455899888 55666677788899999999998753
No 56
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=62.76 E-value=9.9 Score=36.39 Aligned_cols=36 Identities=28% Similarity=0.512 Sum_probs=26.3
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||||..-+ | |.. +.|..+|+++||+|.|+.+.=..
T Consensus 1 ~il~~~~~~-p----~~~----~~la~~L~~~G~~v~~~~~~~~~ 36 (396)
T cd03818 1 RILFVHQNF-P----GQF----RHLAPALAAQGHEVVFLTEPNAA 36 (396)
T ss_pred CEEEECCCC-c----hhH----HHHHHHHHHCCCEEEEEecCCCC
Confidence 588887644 3 222 34888889999999999987553
No 57
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=60.78 E-value=15 Score=31.71 Aligned_cols=41 Identities=29% Similarity=0.348 Sum_probs=28.5
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|||+||.- |+....-=.|-..+|..+.+++||+|.++.|.=
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 78888864 555555567889999999999999999999874
No 58
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=59.99 E-value=8.2 Score=40.00 Aligned_cols=39 Identities=28% Similarity=0.329 Sum_probs=29.9
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
-|||.+.+ . -.+-.--+++.|.+.|+++||+|+|+.|..
T Consensus 21 ~kIl~~~P----~-~~~SH~~~~~~l~~~La~rGH~VTvi~p~~ 59 (507)
T PHA03392 21 ARILAVFP----T-PAYSHHSVFKVYVEALAERGHNVTVIKPTL 59 (507)
T ss_pred ccEEEEcC----C-CCCcHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 35776643 2 123567889999999999999999999964
No 59
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=59.56 E-value=12 Score=34.59 Aligned_cols=32 Identities=25% Similarity=0.498 Sum_probs=28.4
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCCCCCCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHYGNYAE 326 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrYg~i~e 326 (349)
|+|.|-+.|++.|.++||+|.++--......+
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 89999999999999999999999877666554
No 60
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=57.04 E-value=20 Score=33.05 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=28.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
+|++.+.+ +||-=-++..|.++|.++||+|.|+.+.++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~ 38 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRG 38 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCc
Confidence 35555553 355555667999999999999999988765
No 61
>PRK07236 hypothetical protein; Provisional
Probab=54.15 E-value=23 Score=34.19 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=28.3
Q ss_pred CCCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 274 ~~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
.|..++|+.|.+ |++-.+.++ +|++.|++|.|+=
T Consensus 3 ~~~~~~ViIVGa---------G~aGl~~A~--~L~~~G~~v~v~E 36 (386)
T PRK07236 3 HMSGPRAVVIGG---------SLGGLFAAL--LLRRAGWDVDVFE 36 (386)
T ss_pred CCCCCeEEEECC---------CHHHHHHHH--HHHhCCCCEEEEe
Confidence 366789999987 888777766 9999999999987
No 62
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=53.61 E-value=13 Score=37.33 Aligned_cols=36 Identities=39% Similarity=0.643 Sum_probs=27.7
Q ss_pred CceEEEEecccccccccccHHHHHh--HHHHHHHHCCCeEEEEecC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAG--ALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~--sLPkAL~~~G~dVrVimPr 320 (349)
.|||||++. |..|+|.. +|.++|+++||+|+.+.+.
T Consensus 1 ~mkil~~~~--------~~~Ghv~p~~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 1 RMKILFVVC--------GAYGHVNPCLALGKELRRRGHEVVFASTG 38 (406)
T ss_pred CceEEEEec--------cccccccchHHHHHHHHhcCCeEEEEeCH
Confidence 389999876 55677755 5566799999999988764
No 63
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=51.82 E-value=7.5 Score=38.60 Aligned_cols=29 Identities=31% Similarity=0.319 Sum_probs=23.0
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
.+..--+++.|.++|+++||+|+|++|..
T Consensus 9 ~~SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 9 AYSHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp ---SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 34677788999999999999999999976
No 64
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=51.39 E-value=19 Score=34.79 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=37.7
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||.|+- -|+....--.|-...|-.+.+++||+|.++-|..=.
T Consensus 1 m~~~~~~---~~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~~l~ 43 (312)
T TIGR01380 1 LKVAFQM---DPIESINIGKDTTFALMEEAQKRGHELFFYEPGDLS 43 (312)
T ss_pred CeEEEEe---CCHHHCCCCcChHHHHHHHHHHcCCEEEEEehhheE
Confidence 6888886 688888888999999999999999999999998543
No 65
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=51.22 E-value=25 Score=34.69 Aligned_cols=40 Identities=30% Similarity=0.398 Sum_probs=33.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
.+||+... ..|.--.+..|.+.|+++||+|+++.|.+...
T Consensus 7 ~~il~~~p-------~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~ 46 (496)
T KOG1192|consen 7 HNILVPFP-------GQSHLNPMLQLAKRLAERGHNVTVVTPSFNAL 46 (496)
T ss_pred eeEEEECC-------cccHHHHHHHHHHHHHHcCCceEEEEeechhc
Confidence 45666554 67888999999999999999999999998544
No 66
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=50.40 E-value=14 Score=37.87 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhcccCCCCCCccchhhhcCcCCC
Q 018901 98 KKVLAMQKQLLQQISERRKLVSSIKSDIANSEEDEVSYEERENSFSD 144 (349)
Q Consensus 98 kKVLAmQr~LLqQIaERrKLVSSik~si~~~e~~~~sye~~~~s~~~ 144 (349)
-++||+|+.=|.+||+ ++-..|.+.++|+.+..|.++
T Consensus 321 ~~~L~~~~pel~~l~~----------s~~~~e~~~~~~~sss~ssss 357 (407)
T KOG2130|consen 321 ARLLALQRPELADLAD----------STHLEESTGLASDSSSDSSSS 357 (407)
T ss_pred HHHHhhcChhHHHHhh----------hhccccccCcccccccccccc
Confidence 4699999999999986 344456777776665554433
No 67
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=49.62 E-value=28 Score=32.06 Aligned_cols=36 Identities=31% Similarity=0.575 Sum_probs=27.6
Q ss_pred ceEEEEecccccccccccHHHHHhHHH--HHHHHCCCeEEEEecCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALP--KALARRGHRVMVVAPHYG 322 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLP--kAL~~~G~dVrVimPrYg 322 (349)
|||+|...- .|+|-++++++ ++| +||+|.+++....
T Consensus 1 MkIl~~v~~-------~G~GH~~R~~~la~~L--rg~~v~~~~~~~~ 38 (318)
T PF13528_consen 1 MKILFYVQG-------HGLGHASRCLALARAL--RGHEVTFITSGPA 38 (318)
T ss_pred CEEEEEeCC-------CCcCHHHHHHHHHHHH--ccCceEEEEcCCc
Confidence 799887753 28898888765 556 6999999997644
No 68
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=49.30 E-value=27 Score=33.25 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=28.8
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
..|+|.+| |+|.+-.+|.+.|.+.||+|+++-..
T Consensus 3 ~~m~I~ii-----------G~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAIL-----------GAGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEE-----------CccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34788887 77899999999999999999988654
No 69
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=47.92 E-value=28 Score=31.57 Aligned_cols=28 Identities=29% Similarity=0.574 Sum_probs=23.9
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
||.|-+.+.|...|.+.||+|.++-..-
T Consensus 7 GG~G~mG~ala~~L~~~G~~V~v~~r~~ 34 (219)
T TIGR01915 7 GGTGDQGKGLALRLAKAGNKIIIGSRDL 34 (219)
T ss_pred cCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence 5678899999999999999999886543
No 70
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=46.46 E-value=33 Score=31.37 Aligned_cols=28 Identities=32% Similarity=0.560 Sum_probs=24.7
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|-|+|.....+.|.+.|++|+|+-|.+.
T Consensus 17 GgG~va~~ka~~Ll~~ga~V~VIs~~~~ 44 (202)
T PRK06718 17 GGGKVAGRRAITLLKYGAHIVVISPELT 44 (202)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 3499999999999999999999999763
No 71
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=46.33 E-value=35 Score=29.52 Aligned_cols=24 Identities=38% Similarity=0.666 Sum_probs=20.6
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 295 GLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||.+-..+.+.|.+.||+|.++=
T Consensus 8 GlG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 8 GLGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp --SHHHHHHHHHHHHTTTEEEEEE
T ss_pred chHHHHHHHHHHHHhcCCeEEeec
Confidence 899999999999999999999864
No 72
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=46.30 E-value=36 Score=39.23 Aligned_cols=48 Identities=23% Similarity=0.279 Sum_probs=39.0
Q ss_pred CCCceEEEEecc---------cccccccccHHHHHhHHHHHHHHCC--CeEEEEecCCC
Q 018901 275 ANVMNVILVAAE---------CGPWSKTGGLGDVAGALPKALARRG--HRVMVVAPHYG 322 (349)
Q Consensus 275 ~~~mkILfVSsE---------~aPfaKtGGLgDVv~sLPkAL~~~G--~dVrVimPrYg 322 (349)
.++|.|+||+-= +.-=.-|||..=.|..|+++|+++| |+|.||+-+..
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~ 225 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS 225 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcC
Confidence 455889999854 3334678999999999999999998 89999986653
No 73
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=46.25 E-value=37 Score=29.92 Aligned_cols=36 Identities=17% Similarity=0.397 Sum_probs=27.9
Q ss_pred CCceEEEEeccccccccccc--HHHHHhHHHHHHHHCCCeEEEE
Q 018901 276 NVMNVILVAAECGPWSKTGG--LGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGG--LgDVv~sLPkAL~~~G~dVrVi 317 (349)
+.|||+.|++- .|| =..++..|..+|++.|++|-+|
T Consensus 15 ~~~kvI~v~s~------kgG~GKTt~a~~LA~~la~~G~rVllI 52 (204)
T TIGR01007 15 AEIKVLLITSV------KPGEGKSTTSANIAVAFAQAGYKTLLI 52 (204)
T ss_pred CCCcEEEEecC------CCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 33788888873 344 3458999999999999998876
No 74
>PRK06753 hypothetical protein; Provisional
Probab=45.11 E-value=32 Score=32.63 Aligned_cols=30 Identities=33% Similarity=0.660 Sum_probs=24.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|+|+.|.+ |++-.+.++ +|+++|++|.|+=
T Consensus 1 ~~V~IvGg---------G~aGl~~A~--~L~~~g~~v~v~E 30 (373)
T PRK06753 1 MKIAIIGA---------GIGGLTAAA--LLQEQGHEVKVFE 30 (373)
T ss_pred CEEEEECC---------CHHHHHHHH--HHHhCCCcEEEEe
Confidence 57777765 888877766 8999999999875
No 75
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=43.99 E-value=49 Score=27.55 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=30.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
||||.|..-.- +.|--.-++..+-+.|.+.|++|.+|=+.
T Consensus 1 Mkilii~gS~r---~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPR---KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSS---TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCC---CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 79999987655 44556667777788888889999999655
No 76
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=42.98 E-value=41 Score=30.49 Aligned_cols=30 Identities=43% Similarity=0.612 Sum_probs=23.1
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
+|+.|.+ |++-.+.++ +|+++|++|.||=-
T Consensus 3 dV~IvGa---------G~aGl~~A~--~L~~~G~~v~i~E~ 32 (356)
T PF01494_consen 3 DVAIVGA---------GPAGLAAAL--ALARAGIDVTIIER 32 (356)
T ss_dssp EEEEE-----------SHHHHHHHH--HHHHTTCEEEEEES
T ss_pred eEEEECC---------CHHHHHHHH--HHHhcccccccchh
Confidence 5666654 888888777 99999999999854
No 77
>cd00138 PLDc Phospholipase D. Active site motifs; The PLD superfamily includes enzymes involved in signal transduction, lipid biosynthesis, endonucleases and open reading frames in pathogenic viruses and bacteria. PLD hydrolyzes the terminal phosphodiester bond of phospholipids to phosphatidic acid and a hydrophilic constituent. Phosphatidic acid is a compound that is heavily involved in signal transduction. The common features of the family members are that they can bind to a phosphodiester moiety, and that most of these enzymes are active as bi-lobed monomers or dimers.
Probab=41.66 E-value=59 Score=27.45 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=32.8
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
..|.+++..+.|-. +..-..+..+|-++.+ +|.+|+|++.......
T Consensus 35 ~~I~i~~~~~~~~~-~~~~~~l~~~L~~a~~-rGv~V~il~~~~~~~~ 80 (176)
T cd00138 35 KSIYIASFYLSPLI-TEYGPVILDALLAAAR-RGVKVRILVDEWSNTD 80 (176)
T ss_pred eEEEEEEeEecccc-cccchHHHHHHHHHHH-CCCEEEEEEcccccCC
Confidence 36777777665543 3446677888877776 5999999999876543
No 78
>PRK08163 salicylate hydroxylase; Provisional
Probab=41.43 E-value=42 Score=32.09 Aligned_cols=31 Identities=45% Similarity=0.755 Sum_probs=26.1
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+++|+.|.+ |++-.+.++ +|++.|++|.|+=
T Consensus 4 ~~~V~IvGa---------GiaGl~~A~--~L~~~g~~v~v~E 34 (396)
T PRK08163 4 VTPVLIVGG---------GIGGLAAAL--ALARQGIKVKLLE 34 (396)
T ss_pred CCeEEEECC---------cHHHHHHHH--HHHhCCCcEEEEe
Confidence 368999886 888888776 8999999999984
No 79
>PRK05246 glutathione synthetase; Provisional
Probab=39.99 E-value=34 Score=32.84 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=37.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||+|+- -|+.....-.|-...|.++.+++||+|.+|-|..=.
T Consensus 2 ~~~~~~~---~~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~dl~ 44 (316)
T PRK05246 2 MKVAFQM---DPIESINIKKDSTFAMMLEAQRRGHELFYYEPDDLS 44 (316)
T ss_pred ceEEEEe---CCHHHCCCCCChHHHHHHHHHHcCCEEEEEehhhcE
Confidence 7899987 677777788889999999999999999999998543
No 80
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=39.20 E-value=45 Score=32.17 Aligned_cols=34 Identities=38% Similarity=0.663 Sum_probs=28.7
Q ss_pred ceEEEEecccccccccccHH--HHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLg--DVv~sLPkAL~~~G~dVrVi 317 (349)
|+|+.|.+ -.||.| -++.+|.-+|++.|..|.+|
T Consensus 1 M~~iai~s------~kGGvG~TTltAnLA~aL~~~G~~VlaI 36 (243)
T PF06564_consen 1 MKVIAIVS------PKGGVGKTTLTANLAWALARLGESVLAI 36 (243)
T ss_pred CcEEEEec------CCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 67777776 578887 58899999999999999887
No 81
>PRK06756 flavodoxin; Provisional
Probab=39.07 E-value=69 Score=27.01 Aligned_cols=36 Identities=11% Similarity=0.280 Sum_probs=29.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|+|+.|. +..+|.-..++..+.+.|.+.|++|.++-
T Consensus 2 mkv~IiY-----~S~tGnTe~vA~~ia~~l~~~g~~v~~~~ 37 (148)
T PRK06756 2 SKLVMIF-----ASMSGNTEEMADHIAGVIRETENEIEVID 37 (148)
T ss_pred ceEEEEE-----ECCCchHHHHHHHHHHHHhhcCCeEEEee
Confidence 5666554 45689999999999999999999987753
No 82
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=38.52 E-value=71 Score=29.95 Aligned_cols=31 Identities=16% Similarity=0.063 Sum_probs=25.2
Q ss_pred cccccHHHHH--hHHHHHHHHCCCeEEEEecCC
Q 018901 291 SKTGGLGDVA--GALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 291 aKtGGLgDVv--~sLPkAL~~~G~dVrVimPrY 321 (349)
.-||+.|-+- -.|-+.|.+.|++|+|+|-.=
T Consensus 11 gVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~a 43 (196)
T PRK08305 11 GLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYT 43 (196)
T ss_pred EEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHh
Confidence 3458888875 688999999999999998653
No 83
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=38.28 E-value=49 Score=30.52 Aligned_cols=25 Identities=44% Similarity=0.696 Sum_probs=20.6
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
|.|-+.+.+...|++.||+|.++..
T Consensus 7 G~G~~G~~~a~~L~~~g~~V~~~~r 31 (304)
T PRK06522 7 GAGAIGGLFGAALAQAGHDVTLVAR 31 (304)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 4456667788899999999999986
No 84
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=38.16 E-value=29 Score=30.69 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=29.5
Q ss_pred ccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 290 WSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 290 faKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
++.+||=|-+-+.+-+.|.++||+|+++.+.-..
T Consensus 3 ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~ 36 (275)
T COG0702 3 ILVTGATGFVGGAVVRELLARGHEVRAAVRNPEA 36 (275)
T ss_pred EEEEecccchHHHHHHHHHhCCCEEEEEEeCHHH
Confidence 5667888999999999999999999999998543
No 85
>PRK07538 hypothetical protein; Provisional
Probab=37.65 E-value=45 Score=32.58 Aligned_cols=30 Identities=37% Similarity=0.656 Sum_probs=24.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|+|+.|.+ |++-.+.++ +|+++|++|.||=
T Consensus 1 ~dV~IVGa---------G~aGl~~A~--~L~~~G~~v~v~E 30 (413)
T PRK07538 1 MKVLIAGG---------GIGGLTLAL--TLHQRGIEVVVFE 30 (413)
T ss_pred CeEEEECC---------CHHHHHHHH--HHHhCCCcEEEEE
Confidence 56777765 888888776 7999999999883
No 86
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=37.64 E-value=46 Score=33.59 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=27.5
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
..|+|.+| |||-|-..+...|++.||+|.++=.
T Consensus 2 ~~~kI~VI-----------GlG~~G~~~A~~La~~G~~V~~~D~ 34 (415)
T PRK11064 2 SFETISVI-----------GLGYIGLPTAAAFASRQKQVIGVDI 34 (415)
T ss_pred CccEEEEE-----------CcchhhHHHHHHHHhCCCEEEEEeC
Confidence 34677766 8888999999999999999998854
No 87
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=36.53 E-value=36 Score=35.60 Aligned_cols=46 Identities=35% Similarity=0.564 Sum_probs=40.8
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
++|++|+-=.+| .+||.-.-++.|.+.|-++||.|-|+.=.||+..
T Consensus 1 ~~i~mVsdff~P--~~ggveshiy~lSq~li~lghkVvvithayg~r~ 46 (426)
T KOG1111|consen 1 SRILMVSDFFYP--STGGVESHIYALSQCLIRLGHKVVVITHAYGNRV 46 (426)
T ss_pred CcceeeCccccc--CCCChhhhHHHhhcchhhcCCeEEEEeccccCcc
Confidence 468888887766 5899999999999999999999999999999764
No 88
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=36.28 E-value=39 Score=33.74 Aligned_cols=32 Identities=38% Similarity=0.649 Sum_probs=29.4
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
.-||+.|.+..+..+|.+.-.+|+||+|.|.-
T Consensus 99 TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~ 130 (285)
T PF01972_consen 99 TPGGLVDAAEQIARALREHPAKVTVIVPHYAM 130 (285)
T ss_pred CCCCcHHHHHHHHHHHHhCCCCEEEEECcccc
Confidence 45999999999999999999999999999864
No 89
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=36.10 E-value=33 Score=30.97 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=26.9
Q ss_pred ccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 290 WSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 290 faKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
++-|||-|-+-..|...|.++||+|+++-....
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 344677777889999999999999999986543
No 90
>PRK07454 short chain dehydrogenase; Provisional
Probab=35.94 E-value=59 Score=28.57 Aligned_cols=26 Identities=31% Similarity=0.423 Sum_probs=21.7
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-+.+...|.+.|.++|++|.++.
T Consensus 12 tG~sg~iG~~la~~l~~~G~~V~~~~ 37 (241)
T PRK07454 12 TGASSGIGKATALAFAKAGWDLALVA 37 (241)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 46777778888999999999988876
No 91
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=35.58 E-value=50 Score=30.63 Aligned_cols=31 Identities=29% Similarity=0.506 Sum_probs=24.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
|||+++ |.|-+...+...|++.||+|.++..
T Consensus 1 mkI~Ii-----------G~G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVV-----------GAGAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEE-----------CCCHHHHHHHHHHHHCCCceEEEec
Confidence 567776 4456667778889999999999876
No 92
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=35.46 E-value=46 Score=30.63 Aligned_cols=26 Identities=38% Similarity=0.427 Sum_probs=23.4
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-|-+-..|.+.|.++||+|+++.
T Consensus 10 tGatGfIG~~l~~~L~~~g~~V~~~~ 35 (322)
T PLN02662 10 TGASGYIASWLVKLLLQRGYTVKATV 35 (322)
T ss_pred ECChHHHHHHHHHHHHHCCCEEEEEE
Confidence 68888899999999999999998876
No 93
>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins. It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).
Probab=35.09 E-value=35 Score=31.13 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=23.8
Q ss_pred CCCchhHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 018901 83 GNEPEDSLQATIEKSKKVLAMQKQLLQQISERRK 116 (349)
Q Consensus 83 ~DesEd~lqatIEKskKVLAmQr~LLqQIaERrK 116 (349)
-||..|..- -.|++++|-|+-|-||+||.|=.
T Consensus 41 ldEEfD~~p--s~~~~~~lr~Rydrlr~va~rvQ 72 (156)
T PF08372_consen 41 LDEEFDTFP--SSRPPDSLRMRYDRLRSVAGRVQ 72 (156)
T ss_pred hhhhhcccc--cccccHHHHHHHHHHHHHHHHHH
Confidence 345445444 35788999999999999999844
No 94
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=34.98 E-value=53 Score=33.66 Aligned_cols=35 Identities=34% Similarity=0.553 Sum_probs=28.8
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
..++|+.|.+ |++-.+.++ .|+++|++|.|+= +..
T Consensus 2 ~~~dvvVIGa---------G~~GL~aAa--~LA~~G~~V~VlE-~~~ 36 (487)
T COG1233 2 PMYDVVVIGA---------GLNGLAAAA--LLARAGLKVTVLE-KND 36 (487)
T ss_pred CCccEEEECC---------ChhHHHHHH--HHHhCCCEEEEEE-ecC
Confidence 3478888887 888888877 9999999999996 443
No 95
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=34.69 E-value=60 Score=31.39 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=25.3
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
.++|+.|.+ |++-.+.++ +|+++|++|.||=.
T Consensus 3 ~~dv~IvGg---------G~aGl~~A~--~L~~~G~~v~l~E~ 34 (384)
T PRK08849 3 KYDIAVVGG---------GMVGAATAL--GFAKQGRSVAVIEG 34 (384)
T ss_pred cccEEEECc---------CHHHHHHHH--HHHhCCCcEEEEcC
Confidence 356777765 888887776 89999999999873
No 96
>PLN02842 nucleotide kinase
Probab=34.10 E-value=67 Score=34.23 Aligned_cols=47 Identities=26% Similarity=0.350 Sum_probs=42.9
Q ss_pred CCCCceEEEEeccccc---ccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 274 GANVMNVILVAAECGP---WSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 274 ~~~~mkILfVSsE~aP---faKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|.+.|+|-++-+|+.| ....|++=.+++.+...|++.|-+|+|++|.
T Consensus 258 g~~r~~~~~~~pel~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~kv~~~~ 307 (505)
T PLN02842 258 GRTRLKVEINIPELNPEMDVYRIGTLMELVRVLALSFADDGKRVKVCVQG 307 (505)
T ss_pred CcceEEEEEecCccccccccccchhHHHHHHHHHHHHhhcCCceEEEecC
Confidence 5667899999999999 4678999999999999999999999999999
No 97
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=33.46 E-value=56 Score=36.56 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=33.2
Q ss_pred ceEEEEecccc----c---ccccccHHHHHhHHHHH--------HHHCCC----eEEEEecCCC
Q 018901 278 MNVILVAAECG----P---WSKTGGLGDVAGALPKA--------LARRGH----RVMVVAPHYG 322 (349)
Q Consensus 278 mkILfVSsE~a----P---faKtGGLgDVv~sLPkA--------L~~~G~----dVrVimPrYg 322 (349)
|+|++|+.+.+ | .--|||..=.|..|.++ |+++|| +|.||+-+..
T Consensus 256 ~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~ 319 (784)
T TIGR02470 256 FNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIP 319 (784)
T ss_pred ceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC
Confidence 89999999983 2 12379987667766666 579999 6778886543
No 98
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=33.35 E-value=58 Score=30.97 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=26.5
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|||.+| |+|-+-..+...|++.||+|.++...
T Consensus 3 mkI~Ii-----------G~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 3 ARICVL-----------GAGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred ceEEEE-----------CCCHHHHHHHHHHHhcCCcEEEEecH
Confidence 678877 56777788888999999999998854
No 99
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=33.12 E-value=65 Score=30.28 Aligned_cols=28 Identities=36% Similarity=0.474 Sum_probs=24.2
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|+|-+.++|..+|.+.||+|.++-+.-.
T Consensus 7 G~G~mG~sla~~L~~~g~~V~~~d~~~~ 34 (279)
T PRK07417 7 GLGLIGGSLGLDLRSLGHTVYGVSRRES 34 (279)
T ss_pred eecHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6788889999999999999999987643
No 100
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=32.53 E-value=66 Score=30.06 Aligned_cols=32 Identities=38% Similarity=0.549 Sum_probs=26.0
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|||.+| |+|-+-..+...|++.||+|.++-..
T Consensus 2 mkI~ii-----------G~G~mG~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 2 MKIAVL-----------GAGSWGTALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CEEEEE-----------CCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 677777 55777788888999999999998764
No 101
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.82 E-value=84 Score=29.69 Aligned_cols=35 Identities=31% Similarity=0.473 Sum_probs=26.3
Q ss_pred ceEEEEecccccccccccHHHHHhHHHH--HHHHC--CCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPK--ALARR--GHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPk--AL~~~--G~dVrVimPr 320 (349)
||||+|- .++|||++..+|- +|++. +.++.+++-.
T Consensus 1 m~ILii~--------~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 1 MRVLIVK--------TSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred CeEEEEe--------ccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 6788775 4899999999884 56665 7788777744
No 102
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=31.74 E-value=40 Score=32.42 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=17.9
Q ss_pred hHHHHHHHHCCCeEEEEecCC
Q 018901 301 GALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 301 ~sLPkAL~~~G~dVrVimPrY 321 (349)
-.|.++|+++||+|+++.|..
T Consensus 13 l~lA~~L~~~Gh~V~~~~~~~ 33 (392)
T TIGR01426 13 LGVVEELVARGHRVTYATTEE 33 (392)
T ss_pred HHHHHHHHhCCCeEEEEeCHH
Confidence 357889999999999998864
No 103
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=31.53 E-value=50 Score=30.68 Aligned_cols=26 Identities=42% Similarity=0.590 Sum_probs=23.3
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
-+|.+..|.++++.+|.++|++|.++
T Consensus 3 L~G~~sKvaraiA~~LC~rgv~V~m~ 28 (164)
T PF12076_consen 3 LTGNTSKVARAIALALCRRGVQVVML 28 (164)
T ss_pred ecccccHHHHHHHHHHHhcCCEEEEe
Confidence 36899999999999999999888777
No 104
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=31.48 E-value=1.2e+02 Score=26.18 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=27.9
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCe-EEEEec
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHR-VMVVAP 319 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~d-VrVimP 319 (349)
|||++|-. -.|| .+-.+.-+..+.+++.+.||+ |+||.=
T Consensus 1 m~~~iv~~-~~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVT-GPAY--GTQQASSAYQFAQALLAEGHELVSVFFY 40 (128)
T ss_pred CEEEEEEc-CCCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEe
Confidence 56665544 3577 345567777889999999999 588863
No 105
>PRK07308 flavodoxin; Validated
Probab=31.48 E-value=93 Score=26.24 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=27.6
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
|++.+|+|- ..+|.=..++..+.+.|.+.|++|.++
T Consensus 1 m~~~~IvY~-------S~tGnTe~iA~~ia~~l~~~g~~~~~~ 36 (146)
T PRK07308 1 MALAKIVYA-------SMTGNTEEIADIVADKLRELGHDVDVD 36 (146)
T ss_pred CceEEEEEE-------CCCchHHHHHHHHHHHHHhCCCceEEE
Confidence 344556663 468999999999999999999887664
No 106
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=30.94 E-value=76 Score=30.27 Aligned_cols=27 Identities=30% Similarity=0.530 Sum_probs=23.3
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|+|.+-..|...|.+.||+|.++-...
T Consensus 7 GlG~mG~~la~~L~~~g~~V~~~dr~~ 33 (298)
T TIGR00872 7 GLGRMGANIVRRLAKRGHDCVGYDHDQ 33 (298)
T ss_pred cchHHHHHHHHHHHHCCCEEEEEECCH
Confidence 789999999999999999999876543
No 107
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=30.86 E-value=49 Score=29.61 Aligned_cols=30 Identities=33% Similarity=0.551 Sum_probs=26.3
Q ss_pred cccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 291 SKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 291 aKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
+-|||-|-+-..|.+.|.+.|++|+++.=.
T Consensus 2 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 31 (292)
T TIGR01777 2 LITGGTGFIGRALTQRLTKDGHEVTILTRS 31 (292)
T ss_pred EEEcccchhhHHHHHHHHHcCCEEEEEeCC
Confidence 457999999999999999999999988743
No 108
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=30.80 E-value=68 Score=29.99 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=31.5
Q ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 279 kILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||||-.-. ..||..-++..|.++|.+.|+++.|+.
T Consensus 3 ~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~ 38 (374)
T TIGR03088 3 LIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVA 38 (374)
T ss_pred eEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEE
Confidence 788887754 569999999999999999999998886
No 109
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=30.55 E-value=69 Score=30.71 Aligned_cols=24 Identities=38% Similarity=0.618 Sum_probs=20.7
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 295 GLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|+|.+-..+.+.|.+.||+|.|+-
T Consensus 7 GlG~MG~~ma~~L~~~G~~v~v~~ 30 (292)
T PRK15059 7 GLGIMGTPMAINLARAGHQLHVTT 30 (292)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEe
Confidence 788888999999999999988774
No 110
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=30.30 E-value=80 Score=30.19 Aligned_cols=33 Identities=30% Similarity=0.307 Sum_probs=27.6
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
.|+|.+| |+|-+-..+...|++.||+|+++-+.
T Consensus 4 ~m~I~iI-----------G~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 4 GMRVAVL-----------GAGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCeEEEE-----------CcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3788877 66778888899999999999999875
No 111
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=29.73 E-value=72 Score=31.11 Aligned_cols=30 Identities=30% Similarity=0.544 Sum_probs=23.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCC-eEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGH-RVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~-dVrVim 318 (349)
|+|+.|.+ |+|-++.++ +|++.|+ +|.|+=
T Consensus 1 ~~V~IiGg---------GiaGla~A~--~L~~~g~~~v~v~E 31 (414)
T TIGR03219 1 LRVAIIGG---------GIAGVALAL--NLCKHSHLNVQLFE 31 (414)
T ss_pred CeEEEECC---------CHHHHHHHH--HHHhcCCCCEEEEe
Confidence 56777765 888888776 8999985 998863
No 112
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=29.71 E-value=97 Score=25.93 Aligned_cols=20 Identities=40% Similarity=0.433 Sum_probs=15.4
Q ss_pred HhHHHHHHHHCCCeEEEEec
Q 018901 300 AGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 300 v~sLPkAL~~~G~dVrVimP 319 (349)
+..+-+.|.+.|++|+|++=
T Consensus 16 ~~~~l~~L~~~g~~v~vv~S 35 (129)
T PF02441_consen 16 APDLLRRLKRAGWEVRVVLS 35 (129)
T ss_dssp HHHHHHHHHTTTSEEEEEES
T ss_pred HHHHHHHHhhCCCEEEEEEC
Confidence 34556677888999999874
No 113
>PHA02820 phospholipase-D-like protein; Provisional
Probab=29.62 E-value=1.2e+02 Score=31.25 Aligned_cols=47 Identities=13% Similarity=-0.022 Sum_probs=34.4
Q ss_pred ceEEEEecccccccc-----cccHHHHHhHHHHHHHHCCCeEEEEecCCCCC
Q 018901 278 MNVILVAAECGPWSK-----TGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (349)
Q Consensus 278 mkILfVSsE~aPfaK-----tGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i 324 (349)
..|.+.+.-+.|-.. ..=--++..+|-+|.+++|++||+++|.+...
T Consensus 232 ~~I~I~tpyfvP~~~~~~~~~~yw~~i~~AL~~AA~~RGV~VriLvp~~~d~ 283 (424)
T PHA02820 232 KFVYVSVMNFIPIIYSKAGKILFWPYIEDELRRAAIDRKVSVKLLISCWQRS 283 (424)
T ss_pred hEEEEEEccccceeeccCCcccchHHHHHHHHHHHHhCCCEEEEEEeccCCC
Confidence 368888888888622 11125688888877788999999999986544
No 114
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.00 E-value=62 Score=27.87 Aligned_cols=27 Identities=33% Similarity=0.383 Sum_probs=21.2
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
+||-+.+-..|.+.|.++||+|.++..
T Consensus 12 tGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (249)
T PRK12825 12 TGAARGLGRAIALRLARAGADVVVHYR 38 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 466777788889999999999866443
No 115
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=28.87 E-value=2.1e+02 Score=30.25 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=26.3
Q ss_pred CceEEEEecccccccccccHHHH-HhHHHHHHHHCCCeEEEEecCC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDV-AGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDV-v~sLPkAL~~~G~dVrVimPrY 321 (349)
.++||+..+ ||++-+ +-.|-+.|.+.|++|+|+|-.-
T Consensus 70 ~k~IllgVt--------GsIAayka~~lvr~L~k~G~~V~VvmT~s 107 (475)
T PRK13982 70 SKRVTLIIG--------GGIAAYKALDLIRRLKERGAHVRCVLTKA 107 (475)
T ss_pred CCEEEEEEc--------cHHHHHHHHHHHHHHHhCcCEEEEEECcC
Confidence 467776554 666644 3456677789999999999763
No 116
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=28.67 E-value=90 Score=27.49 Aligned_cols=37 Identities=30% Similarity=0.377 Sum_probs=30.3
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
+++|.||. . +-+-|+.+|-.+|+..|.+|+++.|.--
T Consensus 2 gl~i~~vG--------D-~~~rv~~Sl~~~~~~~g~~~~~~~P~~~ 38 (158)
T PF00185_consen 2 GLKIAYVG--------D-GHNRVAHSLIELLAKFGMEVVLIAPEGL 38 (158)
T ss_dssp TEEEEEES--------S-TTSHHHHHHHHHHHHTTSEEEEESSGGG
T ss_pred CCEEEEEC--------C-CCChHHHHHHHHHHHcCCEEEEECCCcc
Confidence 35777775 1 4478999999999999999999999853
No 117
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=28.54 E-value=52 Score=30.05 Aligned_cols=29 Identities=24% Similarity=0.377 Sum_probs=24.9
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
-+||-|-+-+.+.++|.++|++|+++.=.
T Consensus 4 VtGatG~iG~~vv~~L~~~g~~V~~~~R~ 32 (285)
T TIGR03649 4 LTGGTGKTASRIARLLQAASVPFLVASRS 32 (285)
T ss_pred EEcCCChHHHHHHHHHHhCCCcEEEEeCC
Confidence 46888888899999999999999999744
No 118
>PRK07588 hypothetical protein; Provisional
Probab=28.52 E-value=81 Score=30.36 Aligned_cols=30 Identities=30% Similarity=0.417 Sum_probs=23.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|+|+.|.+ |++-.+.++ +|++.|++|.|+=
T Consensus 1 ~~V~IVGg---------G~aGl~~A~--~L~~~G~~v~v~E 30 (391)
T PRK07588 1 MKVAISGA---------GIAGPTLAY--WLRRYGHEPTLIE 30 (391)
T ss_pred CeEEEECc---------cHHHHHHHH--HHHHCCCceEEEe
Confidence 46666654 887777666 8899999999884
No 119
>COG2144 Selenophosphate synthetase-related proteins [General function prediction only]
Probab=28.46 E-value=35 Score=34.60 Aligned_cols=28 Identities=32% Similarity=0.321 Sum_probs=26.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhhhhhh
Q 018901 92 ATIEKSKKVLAMQKQLLQQISERRKLVSSIK 122 (349)
Q Consensus 92 atIEKskKVLAmQr~LLqQIaERrKLVSSik 122 (349)
+|+.|+|+.+--|-+||+++|| ||++=|
T Consensus 186 ttt~ka~~~~~~~~e~l~e~a~---l~~AgK 213 (324)
T COG2144 186 TTTMKAKEKFRAQLELLREGAK---LVKAGK 213 (324)
T ss_pred ceeeccHHHHHHHHHHHHHHHH---HHhhcc
Confidence 4999999999999999999999 998776
No 120
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=28.42 E-value=46 Score=33.14 Aligned_cols=27 Identities=26% Similarity=0.475 Sum_probs=24.4
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
||+|-+-++|..+|.+.||+|.++-+.
T Consensus 105 GG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 105 GGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 679999999999999999999998753
No 121
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=28.41 E-value=91 Score=30.01 Aligned_cols=34 Identities=32% Similarity=0.393 Sum_probs=26.8
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
+..++|+.|.+ |++-.+.++ +|+++|++|.|+=.
T Consensus 4 ~~~~dV~IvGa---------G~aGl~~A~--~La~~G~~v~liE~ 37 (392)
T PRK08773 4 RSRRDAVIVGG---------GVVGAACAL--ALADAGLSVALVEG 37 (392)
T ss_pred CCCCCEEEECc---------CHHHHHHHH--HHhcCCCEEEEEeC
Confidence 34467888775 888888777 79999999998864
No 122
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=28.31 E-value=70 Score=26.92 Aligned_cols=32 Identities=38% Similarity=0.455 Sum_probs=27.1
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
-+||=|-+-..|.+.|.++||+|++++-+=..
T Consensus 3 V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~ 34 (183)
T PF13460_consen 3 VFGATGFVGRALAKQLLRRGHEVTALVRSPSK 34 (183)
T ss_dssp EETTTSHHHHHHHHHHHHTTSEEEEEESSGGG
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEecCchh
Confidence 35788888999999999999999999866543
No 123
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=28.29 E-value=47 Score=29.08 Aligned_cols=32 Identities=34% Similarity=0.581 Sum_probs=24.8
Q ss_pred ccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 290 WSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 290 faKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|+-+||+|.+...|.+.|+++|..=-|++-+-
T Consensus 3 ylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 3 YLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 56789999999999999999996444455444
No 124
>PLN02572 UDP-sulfoquinovose synthase
Probab=28.27 E-value=93 Score=31.51 Aligned_cols=26 Identities=35% Similarity=0.414 Sum_probs=22.5
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
-|||-|-+-..|.+.|.++|++|.++
T Consensus 52 VTGatGfIGs~Lv~~L~~~G~~V~~~ 77 (442)
T PLN02572 52 VIGGDGYCGWATALHLSKRGYEVAIV 77 (442)
T ss_pred EECCCcHHHHHHHHHHHHCCCeEEEE
Confidence 35788888889999999999999986
No 125
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=28.24 E-value=52 Score=29.02 Aligned_cols=27 Identities=44% Similarity=0.609 Sum_probs=20.6
Q ss_pred CCCCCchhHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Q 018901 81 ESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLV 118 (349)
Q Consensus 81 ~~~DesEd~lqatIEKskKVLAmQr~LLqQIaERrKLV 118 (349)
.+.|..|+.++||. +||++|-+|-+|-
T Consensus 10 v~~n~~e~I~~at~-----------eLl~~i~~~N~l~ 36 (118)
T PF07736_consen 10 VEENTPEEILEATR-----------ELLEEILERNELS 36 (118)
T ss_dssp -SSSSHHHHHHHHH-----------HHHHHHHHHTT--
T ss_pred cCCCCHHHHHHHHH-----------HHHHHHHHHcCCC
Confidence 35688999999985 6999999998773
No 126
>PRK08655 prephenate dehydrogenase; Provisional
Probab=28.17 E-value=74 Score=32.52 Aligned_cols=27 Identities=26% Similarity=0.517 Sum_probs=23.2
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
||+|-+.++|.++|.+.|++|.++-+.
T Consensus 7 GG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 7 GGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred ecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 667888899999999999999988754
No 127
>PRK09134 short chain dehydrogenase; Provisional
Probab=27.80 E-value=1.3e+02 Score=26.84 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=19.3
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
||-+.+-..|.+.|.++|++|.++.
T Consensus 16 Gas~giG~~la~~l~~~g~~v~~~~ 40 (258)
T PRK09134 16 GAARRIGRAIALDLAAHGFDVAVHY 40 (258)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4556666788999999999887653
No 128
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=27.61 E-value=1.3e+02 Score=29.42 Aligned_cols=32 Identities=19% Similarity=0.417 Sum_probs=27.0
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+|+||+. ||=|-+-..|.+.|.++||+|+++-
T Consensus 21 ~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~ 52 (370)
T PLN02695 21 KLRICIT----------GAGGFIASHIARRLKAEGHYIIASD 52 (370)
T ss_pred CCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEE
Confidence 4787654 7888899999999999999998874
No 129
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=27.47 E-value=97 Score=29.06 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=27.3
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCC----CeEEEEec
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG----HRVMVVAP 319 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G----~dVrVimP 319 (349)
|..|+|.|| |+|-+..+|.+.|.+.| ++|.|+-+
T Consensus 1 ~~~mkI~~I-----------G~G~mG~aia~~l~~~g~~~~~~v~v~~r 38 (279)
T PRK07679 1 MSIQNISFL-----------GAGSIAEAIIGGLLHANVVKGEQITVSNR 38 (279)
T ss_pred CCCCEEEEE-----------CccHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 455888888 77889999999999998 77777653
No 130
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=27.29 E-value=77 Score=31.34 Aligned_cols=29 Identities=28% Similarity=0.426 Sum_probs=25.4
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
|||-+-..+.+-|.++||+|+|+-..-..
T Consensus 7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~k 35 (286)
T COG2084 7 GLGIMGSPMAANLLKAGHEVTVYNRTPEK 35 (286)
T ss_pred cCchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence 89999999999999999999998765444
No 131
>PRK09271 flavodoxin; Provisional
Probab=27.11 E-value=1.4e+02 Score=25.95 Aligned_cols=35 Identities=29% Similarity=0.363 Sum_probs=27.7
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
|||+.|. ...+|.=..++..|...|.+.|++|++.
T Consensus 1 mkv~IvY-----~S~tGnTe~~A~~ia~~l~~~g~~v~~~ 35 (160)
T PRK09271 1 MRILLAY-----ASLSGNTREVAREIEERCEEAGHEVDWV 35 (160)
T ss_pred CeEEEEE-----EcCCchHHHHHHHHHHHHHhCCCeeEEE
Confidence 5655554 3467888999999999999999998754
No 132
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=27.11 E-value=79 Score=33.67 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=25.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|||..+.+ |||-...+. .|+++||+|+|+=-+
T Consensus 1 ~rVai~Ga---------G~AgL~~a~--~La~~g~~vt~~ea~ 32 (485)
T COG3349 1 MRVAIAGA---------GLAGLAAAY--ELADAGYDVTLYEAR 32 (485)
T ss_pred CeEEEEcc---------cHHHHHHHH--HHHhCCCceEEEecc
Confidence 56776665 999888765 999999999997533
No 133
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=27.10 E-value=91 Score=29.66 Aligned_cols=34 Identities=35% Similarity=0.527 Sum_probs=26.5
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHC---CCeEEEEec
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARR---GHRVMVVAP 319 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~---G~dVrVimP 319 (349)
|..++|+.|.+ |++-.+.++ +|+++ |++|.|+=.
T Consensus 1 m~~~dv~IvGa---------G~aGl~~A~--~L~~~~~~G~~v~v~E~ 37 (395)
T PRK05732 1 MSRMDVIIVGG---------GMAGATLAL--ALSRLSHGGLPVALIEA 37 (395)
T ss_pred CCcCCEEEECc---------CHHHHHHHH--HhhhcccCCCEEEEEeC
Confidence 44577888876 888877666 88888 999999865
No 134
>PRK09739 hypothetical protein; Provisional
Probab=27.10 E-value=1.7e+02 Score=26.11 Aligned_cols=40 Identities=28% Similarity=0.230 Sum_probs=27.5
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
.+||||+|.+=-.+- |-=.-++..+-+.+.+.|++|.++=
T Consensus 2 ~mmkiliI~~sp~~~---s~s~~l~~~~~~~~~~~g~~v~~~d 41 (199)
T PRK09739 2 QSMRIYLVWAHPRHD---SLTAKVAEAIHQRAQERGHQVEELD 41 (199)
T ss_pred CCceEEEEEcCCCCC---CcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 358999998854442 2223455666778888999999874
No 135
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=26.97 E-value=79 Score=30.27 Aligned_cols=36 Identities=22% Similarity=0.435 Sum_probs=27.1
Q ss_pred ceEEEEecccccccccccHHHHHhHHH--HHHHHC--CCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALP--KALARR--GHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLP--kAL~~~--G~dVrVimPrY 321 (349)
||||+| +.++|||++-++| ++|++. +.+|.+++..+
T Consensus 1 mrILii--------~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~ 40 (348)
T PRK10916 1 MKILVI--------GPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAW 40 (348)
T ss_pred CcEEEE--------ccCcccHHHhHHHHHHHHHHHCCCCeEEEEechh
Confidence 677776 5589999999988 567775 67888776554
No 136
>PRK05868 hypothetical protein; Validated
Probab=26.89 E-value=93 Score=30.32 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=23.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
++|+.|. ||++-.+.++ +|+++|++|.|+=
T Consensus 2 ~~V~IvG---------gG~aGl~~A~--~L~~~G~~v~viE 31 (372)
T PRK05868 2 KTVVVSG---------ASVAGTAAAY--WLGRHGYSVTMVE 31 (372)
T ss_pred CeEEEEC---------CCHHHHHHHH--HHHhCCCCEEEEc
Confidence 4677665 4888877766 7999999999985
No 137
>PRK05993 short chain dehydrogenase; Provisional
Probab=26.80 E-value=1.1e+02 Score=27.99 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=19.9
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
||-+.+-..|.+.|+++|++|.++.-
T Consensus 11 GasggiG~~la~~l~~~G~~Vi~~~r 36 (277)
T PRK05993 11 GCSSGIGAYCARALQSDGWRVFATCR 36 (277)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 45555567788999999999888753
No 138
>PRK07045 putative monooxygenase; Reviewed
Probab=26.79 E-value=94 Score=29.89 Aligned_cols=32 Identities=41% Similarity=0.579 Sum_probs=26.0
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+.++|+.|.+ |++-.+.++ +|+++|++|.|+=
T Consensus 4 ~~~~V~IiGg---------GpaGl~~A~--~L~~~G~~v~v~E 35 (388)
T PRK07045 4 NPVDVLINGS---------GIAGVALAH--LLGARGHSVTVVE 35 (388)
T ss_pred ceeEEEEECC---------cHHHHHHHH--HHHhcCCcEEEEe
Confidence 4568888875 888888877 8999999999883
No 139
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=26.60 E-value=1.2e+02 Score=26.83 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=28.5
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
..+||.| |=|.|.....+.|.+.|++|+||-|...
T Consensus 13 ~~~vlVv-----------GGG~va~rka~~Ll~~ga~V~VIsp~~~ 47 (157)
T PRK06719 13 NKVVVII-----------GGGKIAYRKASGLKDTGAFVTVVSPEIC 47 (157)
T ss_pred CCEEEEE-----------CCCHHHHHHHHHHHhCCCEEEEEcCccC
Confidence 4567776 4478889999999999999999988753
No 140
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=26.43 E-value=67 Score=28.15 Aligned_cols=28 Identities=32% Similarity=0.324 Sum_probs=23.4
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
-+||-+.+...|.+.|.++|++|.++.-
T Consensus 6 ItGa~g~lG~~l~~~l~~~g~~v~~~~r 33 (255)
T TIGR01963 6 VTGAASGIGLAIALALAAAGANVVVNDL 33 (255)
T ss_pred EcCCcchHHHHHHHHHHHCCCEEEEEeC
Confidence 3577788889999999999999888764
No 141
>PLN00198 anthocyanidin reductase; Provisional
Probab=26.29 E-value=73 Score=29.91 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=22.4
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-|-+-..|.++|.++|++|.++.
T Consensus 15 tG~~GfIG~~l~~~L~~~g~~V~~~~ 40 (338)
T PLN00198 15 IGGTGFLASLLIKLLLQKGYAVNTTV 40 (338)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 57888888999999999999998664
No 142
>PRK12829 short chain dehydrogenase; Provisional
Probab=26.21 E-value=61 Score=28.62 Aligned_cols=25 Identities=36% Similarity=0.589 Sum_probs=20.8
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
||-+-+...+.+.|.++|++|.++.
T Consensus 18 Ga~g~iG~~~a~~L~~~g~~V~~~~ 42 (264)
T PRK12829 18 GGASGIGRAIAEAFAEAGARVHVCD 42 (264)
T ss_pred CCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 6667777888999999999987765
No 143
>PLN02686 cinnamoyl-CoA reductase
Probab=26.14 E-value=71 Score=31.10 Aligned_cols=26 Identities=31% Similarity=0.410 Sum_probs=22.6
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-|-+-..|.+.|.++|++|+++.
T Consensus 59 TGatGfIG~~lv~~L~~~G~~V~~~~ 84 (367)
T PLN02686 59 TGGVSFLGLAIVDRLLRHGYSVRIAV 84 (367)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEe
Confidence 46888888999999999999998865
No 144
>CHL00194 ycf39 Ycf39; Provisional
Probab=25.99 E-value=67 Score=30.19 Aligned_cols=27 Identities=15% Similarity=0.282 Sum_probs=23.9
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
+||=|-+-+.|.++|.++||+|+++.=
T Consensus 6 tGatG~iG~~lv~~Ll~~g~~V~~l~R 32 (317)
T CHL00194 6 IGATGTLGRQIVRQALDEGYQVRCLVR 32 (317)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEEc
Confidence 578888889999999999999999873
No 145
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=25.81 E-value=1.1e+02 Score=28.89 Aligned_cols=35 Identities=23% Similarity=0.427 Sum_probs=27.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|||++++.|..=+ -...|-++|.++||+|.++-|.
T Consensus 1 m~~~i~~~~~s~~--------s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTLY--------SCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcch--------hHHHHHHHHHHcCCeEEEEehH
Confidence 6888888875433 2356778889999999999877
No 146
>PLN02256 arogenate dehydrogenase
Probab=25.60 E-value=1.2e+02 Score=29.61 Aligned_cols=35 Identities=23% Similarity=0.496 Sum_probs=28.5
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
..|+|.+| |+|-+.+++.++|.+.|++|.++-+..
T Consensus 35 ~~~kI~II-----------G~G~mG~slA~~L~~~G~~V~~~d~~~ 69 (304)
T PLN02256 35 RKLKIGIV-----------GFGNFGQFLAKTFVKQGHTVLATSRSD 69 (304)
T ss_pred CCCEEEEE-----------eeCHHHHHHHHHHHhCCCEEEEEECcc
Confidence 44788887 567778889999999999999887663
No 147
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=25.60 E-value=76 Score=27.63 Aligned_cols=29 Identities=31% Similarity=0.311 Sum_probs=23.2
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
-+||-+-+-..|.+.|.++|++|.++..+
T Consensus 6 ItGa~g~iG~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 6 VTGGSRGIGRATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35677788888999999999999876543
No 148
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=25.41 E-value=65 Score=29.94 Aligned_cols=27 Identities=30% Similarity=0.484 Sum_probs=23.0
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-|-+...|.+.|.++|++|.++.
T Consensus 5 VtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 5 VTGGSGYIGSHTCVQLLQNGHDVVILD 31 (338)
T ss_pred EECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 357788888889999999999999874
No 149
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=25.37 E-value=1.1e+02 Score=29.20 Aligned_cols=26 Identities=35% Similarity=0.649 Sum_probs=22.6
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|+|.+-..+.+.|.+.|++|.|+-+.
T Consensus 7 GlG~MG~~mA~~L~~~g~~v~v~dr~ 32 (301)
T PRK09599 7 GLGRMGGNMARRLLRGGHEVVGYDRN 32 (301)
T ss_pred cccHHHHHHHHHHHHCCCeEEEEECC
Confidence 88999999999999999999887653
No 150
>KOG2646 consensus Ribosomal protein S5 [Translation, ribosomal structure and biogenesis]
Probab=25.11 E-value=42 Score=34.82 Aligned_cols=23 Identities=35% Similarity=0.420 Sum_probs=19.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 018901 89 SLQATIEKSKKVLAMQKQLLQQISERRK 116 (349)
Q Consensus 89 ~lqatIEKskKVLAmQr~LLqQIaERrK 116 (349)
..+|++| -|+.|+ +.||||.||-
T Consensus 311 i~k~~~e----~l~~qe-t~qqlA~rkG 333 (396)
T KOG2646|consen 311 ITKAAFE----ALALQE-THQQLAYRKG 333 (396)
T ss_pred HHHHHHH----HHhhhh-hhHHHHHhcC
Confidence 6688887 588998 9999999984
No 151
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=25.10 E-value=1.5e+02 Score=28.66 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=25.5
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
.++|+.|.+ |++-.+.++ +|++.|++|.|+=
T Consensus 18 ~~dV~IvGa---------G~aGl~~A~--~L~~~G~~v~v~E 48 (415)
T PRK07364 18 TYDVAIVGG---------GIVGLTLAA--ALKDSGLRIALIE 48 (415)
T ss_pred ccCEEEECc---------CHHHHHHHH--HHhcCCCEEEEEe
Confidence 368888876 888887766 8999999999984
No 152
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=24.96 E-value=62 Score=31.49 Aligned_cols=24 Identities=38% Similarity=0.599 Sum_probs=21.9
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 294 GGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
+|+|.+-++|.++|.+.|+.|.|+
T Consensus 9 vG~GliG~s~a~~l~~~g~~v~i~ 32 (279)
T COG0287 9 VGLGLMGGSLARALKEAGLVVRII 32 (279)
T ss_pred ECCchHHHHHHHHHHHcCCeEEEE
Confidence 589999999999999999999665
No 153
>PRK06475 salicylate hydroxylase; Provisional
Probab=24.82 E-value=93 Score=30.26 Aligned_cols=31 Identities=29% Similarity=0.507 Sum_probs=24.8
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
.||+.|.+ |++-.+.++ +|++.|++|.|+=.
T Consensus 3 ~~V~IvGg---------GiaGl~~A~--~L~~~G~~V~i~E~ 33 (400)
T PRK06475 3 GSPLIAGA---------GVAGLSAAL--ELAARGWAVTIIEK 33 (400)
T ss_pred CcEEEECC---------CHHHHHHHH--HHHhCCCcEEEEec
Confidence 46777765 888888776 79999999999863
No 154
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=24.76 E-value=1.1e+02 Score=29.84 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=25.5
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
.+|+.|.+ |++-.+.++ +|++.|++|.|+=..
T Consensus 5 ~dV~IvGa---------G~~Gl~~A~--~L~~~G~~v~viE~~ 36 (405)
T PRK08850 5 VDVAIIGG---------GMVGLALAA--ALKESDLRIAVIEGQ 36 (405)
T ss_pred CCEEEECc---------cHHHHHHHH--HHHhCCCEEEEEcCC
Confidence 46777765 888888877 799999999998643
No 155
>PRK09004 FMN-binding protein MioC; Provisional
Probab=24.71 E-value=1.3e+02 Score=25.99 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=27.4
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
|++..|+|-| .+|-=..++..|.+.|.++|++|.|+
T Consensus 1 M~~i~I~ygS-------~tGnae~~A~~l~~~~~~~g~~~~~~ 36 (146)
T PRK09004 1 MADITLISGS-------TLGGAEYVADHLAEKLEEAGFSTETL 36 (146)
T ss_pred CCeEEEEEEc-------CchHHHHHHHHHHHHHHHcCCceEEe
Confidence 3344555544 47888889999999999999999864
No 156
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=24.70 E-value=1e+02 Score=23.36 Aligned_cols=23 Identities=39% Similarity=0.569 Sum_probs=17.6
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
||++-.+.+. .|++.|++|.|+=
T Consensus 4 aG~sGl~aA~--~L~~~g~~v~v~E 26 (68)
T PF13450_consen 4 AGISGLAAAY--YLAKAGYRVTVFE 26 (68)
T ss_dssp -SHHHHHHHH--HHHHTTSEEEEEE
T ss_pred eCHHHHHHHH--HHHHCCCcEEEEe
Confidence 5777777665 8899999999873
No 157
>PRK08105 flavodoxin; Provisional
Probab=24.68 E-value=1.3e+02 Score=26.12 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=23.2
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
.||-=.+++..|.+.|.++|++|.|+-
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~ 37 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFE 37 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEec
Confidence 478888999999999999999998653
No 158
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=24.55 E-value=1.3e+02 Score=29.54 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=29.0
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrYg~ 323 (349)
.+|.+++.=. +|-.-=+..|.++|+++||+|.|+.+....
T Consensus 4 ~~~~~~~~~~------~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~ 43 (415)
T cd03816 4 KRVCVLVLGD------IGRSPRMQYHALSLAKHGWKVDLVGYLETP 43 (415)
T ss_pred cEEEEEEecc------cCCCHHHHHHHHHHHhcCceEEEEEecCCC
Confidence 4666666622 344455677999999999999999987543
No 159
>PRK06849 hypothetical protein; Provisional
Probab=23.95 E-value=1.2e+02 Score=29.68 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=26.0
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
++|+||.+.... -+...+.++|.+.||+|.++-..
T Consensus 3 ~~~~VLI~G~~~----------~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGARA----------PAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCCc----------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 457888875532 26778889999999999988443
No 160
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=23.93 E-value=1.5e+02 Score=24.89 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=27.0
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEE
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMV 316 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrV 316 (349)
|+|+.|- +..+|-=..++..|.+.|...|++|++
T Consensus 1 M~i~IiY-----~S~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAY-----LSLSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEE-----ECCCChHHHHHHHHHHHHhhCCeeEEe
Confidence 4555544 457888899999999999999999873
No 161
>smart00642 Aamy Alpha-amylase domain.
Probab=23.64 E-value=1.2e+02 Score=27.07 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=28.6
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEecCCCCCC
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVimPrYg~i~ 325 (349)
.|-+.++...|+ .|+++|++..-++|-|....
T Consensus 15 ~G~~~gi~~~l~-yl~~lG~~~I~l~Pi~~~~~ 46 (166)
T smart00642 15 GGDLQGIIEKLD-YLKDLGVTAIWLSPIFESPQ 46 (166)
T ss_pred CcCHHHHHHHHH-HHHHCCCCEEEECcceeCCC
Confidence 466999999999 99999999999999987764
No 162
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=23.23 E-value=1.2e+02 Score=29.76 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=24.3
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
++|+.|. ||++-.+.++ +|+++|++|.||=
T Consensus 3 ~dV~IVG---------aG~aGl~~A~--~L~~~G~~v~viE 32 (390)
T TIGR02360 3 TQVAIIG---------AGPSGLLLGQ--LLHKAGIDNVILE 32 (390)
T ss_pred ceEEEEC---------ccHHHHHHHH--HHHHCCCCEEEEE
Confidence 4677776 4888888776 8999999999886
No 163
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=23.23 E-value=1e+02 Score=30.25 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=22.9
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|.|.+...+.+.|.+.|++|.++-...
T Consensus 7 G~G~ig~~~a~~L~~~g~~v~vid~~~ 33 (453)
T PRK09496 7 GAGQVGYTLAENLSGENNDVTVIDTDE 33 (453)
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 458899999999999999999887643
No 164
>PRK09126 hypothetical protein; Provisional
Probab=23.22 E-value=1.2e+02 Score=29.00 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=22.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
.+|+.|.+ |++-.+.++ +|+++|++|.|+
T Consensus 4 ~dviIvGg---------G~aGl~~A~--~L~~~G~~v~v~ 32 (392)
T PRK09126 4 SDIVVVGA---------GPAGLSFAR--SLAGSGLKVTLI 32 (392)
T ss_pred ccEEEECc---------CHHHHHHHH--HHHhCCCcEEEE
Confidence 45666654 888877766 889999999888
No 165
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=23.19 E-value=79 Score=27.62 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=20.5
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-+-+...|.+.|.++|++|.++.
T Consensus 11 tGasg~iG~~l~~~l~~~G~~V~~~~ 36 (251)
T PRK07231 11 TGASSGIGEGIARRFAAEGARVVVTD 36 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 45566666888999999999987764
No 166
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=23.16 E-value=73 Score=25.76 Aligned_cols=25 Identities=32% Similarity=0.535 Sum_probs=23.1
Q ss_pred HHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 297 GDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 297 gDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|.++..-.+.|.+.|.+|+|+-|..
T Consensus 16 G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 16 GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred CHHHHHHHHHHHhCCCEEEEECCch
Confidence 8888888999999999999999995
No 167
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=23.08 E-value=71 Score=29.13 Aligned_cols=28 Identities=32% Similarity=0.405 Sum_probs=24.0
Q ss_pred cccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 291 SKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 291 aKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+-+||-|-+...|.++|.++|++|+++.
T Consensus 4 lItG~~G~iG~~l~~~L~~~g~~V~~~~ 31 (328)
T TIGR03466 4 LVTGATGFVGSAVVRLLLEQGEEVRVLV 31 (328)
T ss_pred EEECCccchhHHHHHHHHHCCCEEEEEE
Confidence 3467888888999999999999998875
No 168
>PRK06194 hypothetical protein; Provisional
Probab=22.77 E-value=87 Score=28.39 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=21.2
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-+.+-..|.+.|.++|++|.++-
T Consensus 12 tGasggIG~~la~~l~~~G~~V~~~~ 37 (287)
T PRK06194 12 TGAASGFGLAFARIGAALGMKLVLAD 37 (287)
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEe
Confidence 46777778889999999999987653
No 169
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=22.70 E-value=1.3e+02 Score=28.66 Aligned_cols=27 Identities=30% Similarity=0.375 Sum_probs=23.6
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|+|-+-.++...|++.||+|+++-+.-
T Consensus 9 G~G~mG~~iA~~la~~G~~V~v~d~~~ 35 (308)
T PRK06129 9 GAGLIGRAWAIVFARAGHEVRLWDADP 35 (308)
T ss_pred CccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence 577788899999999999999998763
No 170
>PRK08013 oxidoreductase; Provisional
Probab=22.59 E-value=1.2e+02 Score=29.48 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=23.8
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
...|+.|.+ |++-.+.++ +|+++|++|.||=
T Consensus 3 ~~dV~IvGa---------GpaGl~~A~--~La~~G~~v~viE 33 (400)
T PRK08013 3 SVDVVIAGG---------GMVGLAVAC--GLQGSGLRVAVLE 33 (400)
T ss_pred cCCEEEECc---------CHHHHHHHH--HHhhCCCEEEEEe
Confidence 356777765 777777665 8999999999986
No 171
>PLN02688 pyrroline-5-carboxylate reductase
Probab=22.38 E-value=1.3e+02 Score=27.64 Aligned_cols=23 Identities=30% Similarity=0.563 Sum_probs=20.2
Q ss_pred cHHHHHhHHHHHHHHCCC----eEEEE
Q 018901 295 GLGDVAGALPKALARRGH----RVMVV 317 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~----dVrVi 317 (349)
|+|-+..++.+.|.+.|+ +|.|+
T Consensus 7 G~G~mG~a~a~~L~~~g~~~~~~i~v~ 33 (266)
T PLN02688 7 GAGKMAEAIARGLVASGVVPPSRISTA 33 (266)
T ss_pred CCcHHHHHHHHHHHHCCCCCcceEEEE
Confidence 788899999999999998 77776
No 172
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=22.24 E-value=93 Score=27.31 Aligned_cols=27 Identities=26% Similarity=0.283 Sum_probs=22.2
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-+.+-..+.+.|.++|++|.+++
T Consensus 9 ItGa~g~iG~~~a~~l~~~g~~v~~~~ 35 (250)
T PRK08063 9 VTGSSRGIGKAIALRLAEEGYDIAVNY 35 (250)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 357778888889999999999987754
No 173
>PRK04155 chaperone protein HchA; Provisional
Probab=22.21 E-value=3.7e+02 Score=26.41 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=30.5
Q ss_pred ceEEEEeccccccc----c--cccHHHHHhHHH-HHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWS----K--TGGLGDVAGALP-KALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfa----K--tGGLgDVv~sLP-kAL~~~G~dVrVimPrY 321 (349)
+|||||.+...-+. + ..|.-++=...| ..|.+.|++|.|+.|.=
T Consensus 50 kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~G 100 (287)
T PRK04155 50 KKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLSG 100 (287)
T ss_pred CeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 49999999876553 1 244555444444 35577899999999963
No 174
>PLN02650 dihydroflavonol-4-reductase
Probab=22.14 E-value=1e+02 Score=29.28 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=24.3
Q ss_pred cccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 291 SKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 291 aKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+-|||-|-+-..|.+.|.++|++|+++.
T Consensus 9 LVTGatGfIGs~l~~~L~~~G~~V~~~~ 36 (351)
T PLN02650 9 CVTGASGFIGSWLVMRLLERGYTVRATV 36 (351)
T ss_pred EEeCCcHHHHHHHHHHHHHCCCEEEEEE
Confidence 3468889999999999999999998765
No 175
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=22.10 E-value=1.2e+02 Score=33.40 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=26.9
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
++++||.|.+ |++-.+.++ +|+++|++|.||=
T Consensus 80 ~~~~VlIVGg---------GIaGLalAl--aL~r~Gi~V~V~E 111 (668)
T PLN02927 80 KKSRVLVAGG---------GIGGLVFAL--AAKKKGFDVLVFE 111 (668)
T ss_pred CCCCEEEECC---------CHHHHHHHH--HHHhcCCeEEEEe
Confidence 3478999986 888888777 9999999999984
No 176
>PRK07774 short chain dehydrogenase; Provisional
Probab=22.10 E-value=91 Score=27.39 Aligned_cols=27 Identities=41% Similarity=0.588 Sum_probs=22.4
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-+.+-..|.++|.++|++|.++-
T Consensus 11 ItGasg~iG~~la~~l~~~g~~vi~~~ 37 (250)
T PRK07774 11 VTGAAGGIGQAYAEALAREGASVVVAD 37 (250)
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 347778888999999999999987764
No 177
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=22.04 E-value=1.3e+02 Score=28.96 Aligned_cols=33 Identities=30% Similarity=0.396 Sum_probs=25.3
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
.|||+++.+ |++|-+.+ -.|++.|++|.++...
T Consensus 2 ~m~I~IiGa--------GaiG~~~a---~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILGA--------GSLGSLWA---CRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEECC--------CHHHHHHH---HHHHhCCCCeEEEEec
Confidence 378888765 77776654 4588999999999874
No 178
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=22.04 E-value=89 Score=27.42 Aligned_cols=27 Identities=26% Similarity=0.442 Sum_probs=22.2
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-+.+...|.+.|.++|++|.++.
T Consensus 9 ItG~sg~iG~~la~~l~~~g~~v~~~~ 35 (258)
T PRK12429 9 VTGAASGIGLEIALALAKEGAKVVIAD 35 (258)
T ss_pred EECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 456777778899999999999987764
No 179
>PRK06101 short chain dehydrogenase; Provisional
Probab=22.02 E-value=86 Score=27.84 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=21.4
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-+.+-..+.+.|.++|++|.++-
T Consensus 7 tGas~giG~~la~~L~~~G~~V~~~~ 32 (240)
T PRK06101 7 TGATSGIGKQLALDYAKQGWQVIACG 32 (240)
T ss_pred EcCCcHHHHHHHHHHHhCCCEEEEEE
Confidence 46667777888999999999988775
No 180
>PRK09135 pteridine reductase; Provisional
Probab=22.01 E-value=98 Score=26.92 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=23.6
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
-|||-+-+...|.+.|.++|++|.++..+
T Consensus 11 ItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 11 ITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 34667777888899999999999888754
No 181
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=21.97 E-value=1.4e+02 Score=30.04 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=29.8
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
+++|.||. -+.-|+.+|-.+++..|.+|+++.|.-
T Consensus 154 glkv~~vG----------D~~~v~~Sl~~~~~~~g~~v~~~~P~~ 188 (338)
T PRK02255 154 DCKVVFVG----------DATQVCVSLMFIATKMGMDFVHFGPKG 188 (338)
T ss_pred CCEEEEEC----------CCchHHHHHHHHHHhCCCEEEEECCCc
Confidence 47888884 345799999999999999999999973
No 182
>PRK06180 short chain dehydrogenase; Provisional
Probab=21.78 E-value=86 Score=28.58 Aligned_cols=26 Identities=35% Similarity=0.385 Sum_probs=21.2
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
|||-+-+-..|.+.|.++|++|.++.
T Consensus 10 tGasggiG~~la~~l~~~G~~V~~~~ 35 (277)
T PRK06180 10 TGVSSGFGRALAQAALAAGHRVVGTV 35 (277)
T ss_pred ecCCChHHHHHHHHHHhCcCEEEEEe
Confidence 45666777888999999999998876
No 183
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=21.76 E-value=1.3e+02 Score=29.41 Aligned_cols=32 Identities=41% Similarity=0.520 Sum_probs=25.6
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
+.|+.|.+ |++-.+.++ +|++.|++|.||=+.
T Consensus 3 ~dV~IvGa---------G~aGl~lA~--~L~~~G~~V~l~E~~ 34 (387)
T COG0654 3 LDVAIVGA---------GPAGLALAL--ALARAGLDVTLLERA 34 (387)
T ss_pred CCEEEECC---------CHHHHHHHH--HHHhCCCcEEEEccC
Confidence 56776664 888777766 999999999999776
No 184
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=21.71 E-value=1.5e+02 Score=28.12 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=19.0
Q ss_pred ccc-cHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 292 KTG-GLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 292 KtG-GLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
-+| |..-=+-+|..+|++ ||+|.++.-
T Consensus 8 g~G~GH~~r~~ala~~L~~-g~ev~~~~~ 35 (321)
T TIGR00661 8 GEGFGHTTRSVAIGEALKN-DYEVSYIAS 35 (321)
T ss_pred ccCccHHHHHHHHHHHHhC-CCeEEEEEc
Confidence 345 555555566678888 999998863
No 185
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=21.64 E-value=1.7e+02 Score=28.60 Aligned_cols=31 Identities=10% Similarity=0.183 Sum_probs=26.3
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCC
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGH 312 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~ 312 (349)
.||||++++.+ -||.--++.+|-++|.++|.
T Consensus 5 ~~~vlil~~~~-----G~GH~~aA~al~~~~~~~~~ 35 (391)
T PRK13608 5 NKKILIITGSF-----GNGHMQVTQSIVNQLNDMNL 35 (391)
T ss_pred CceEEEEECCC-----CchHHHHHHHHHHHHHhhCC
Confidence 47999999753 46999999999999998874
No 186
>CHL00175 minD septum-site determining protein; Validated
Probab=21.52 E-value=1.7e+02 Score=27.07 Aligned_cols=34 Identities=29% Similarity=0.594 Sum_probs=27.3
Q ss_pred ceEEEEecccccccccccHH--HHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLg--DVv~sLPkAL~~~G~dVrVi 317 (349)
.+|+.|++ -.||.| -++..|+.+|++.|.+|-+|
T Consensus 15 ~~vi~v~s------~KGGvGKTt~a~nLA~~La~~g~~vlli 50 (281)
T CHL00175 15 SRIIVITS------GKGGVGKTTTTANLGMSIARLGYRVALI 50 (281)
T ss_pred ceEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCeEEEE
Confidence 47888877 356665 67889999999999998876
No 187
>PRK08017 oxidoreductase; Provisional
Probab=21.46 E-value=92 Score=27.46 Aligned_cols=29 Identities=28% Similarity=0.296 Sum_probs=23.3
Q ss_pred cccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 291 SKTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 291 aKtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
+-+||-+.+-.+|.+.|.++|++|.++..
T Consensus 6 lVtGasg~IG~~la~~l~~~g~~v~~~~r 34 (256)
T PRK08017 6 LITGCSSGIGLEAALELKRRGYRVLAACR 34 (256)
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 34677788889999999999999877643
No 188
>COG0857 Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only]
Probab=21.35 E-value=1.6e+02 Score=29.90 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=34.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
|++||+++.=..- |+.-+.-+|-++|.++|..|-+|-|--
T Consensus 2 ~~~l~l~p~~~~~----G~tsi~lgLl~~l~~k~~kva~~kPI~ 41 (354)
T COG0857 2 SRTLLLIPTETGV----GKTSISLGLLRALEQKGLKVAYFKPIG 41 (354)
T ss_pred cceEEEeccCCCc----cHHHHHHHHHHHHHHcCceeEEEeccc
Confidence 7889987754443 888999999999999999999999984
No 189
>PRK06138 short chain dehydrogenase; Provisional
Probab=21.32 E-value=93 Score=27.28 Aligned_cols=27 Identities=37% Similarity=0.473 Sum_probs=22.0
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-+.+...|.+.|.++|++|.++.
T Consensus 10 ItG~sg~iG~~la~~l~~~G~~v~~~~ 36 (252)
T PRK06138 10 VTGAGSGIGRATAKLFAREGARVVVAD 36 (252)
T ss_pred EeCCCchHHHHHHHHHHHCCCeEEEec
Confidence 356778888999999999999886663
No 190
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=21.22 E-value=1e+02 Score=26.62 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=20.1
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-+-+...|.+.|.+.|++|.++.
T Consensus 11 tG~sg~iG~~l~~~l~~~G~~v~~~~ 36 (248)
T PRK05557 11 TGASRGIGRAIAERLAAQGANVVINY 36 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 34556667788899999999987765
No 191
>PRK06184 hypothetical protein; Provisional
Probab=21.21 E-value=1.4e+02 Score=30.26 Aligned_cols=31 Identities=32% Similarity=0.505 Sum_probs=24.5
Q ss_pred CceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 277 ~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
...||.|.+ |.+-.+.++ .|++.|++|+||=
T Consensus 3 ~~dVlIVGa---------GpaGl~~A~--~La~~Gi~v~viE 33 (502)
T PRK06184 3 TTDVLIVGA---------GPTGLTLAI--ELARRGVSFRLIE 33 (502)
T ss_pred CCcEEEECC---------CHHHHHHHH--HHHHCCCcEEEEe
Confidence 356777765 888877776 8999999999984
No 192
>PRK07814 short chain dehydrogenase; Provisional
Probab=21.20 E-value=90 Score=28.14 Aligned_cols=26 Identities=31% Similarity=0.442 Sum_probs=20.6
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-+.+..++.+.|.++|++|.++.
T Consensus 16 tGasggIG~~~a~~l~~~G~~Vi~~~ 41 (263)
T PRK07814 16 TGAGRGLGAAIALAFAEAGADVLIAA 41 (263)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 45666677888999999999987765
No 193
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=21.19 E-value=1.1e+02 Score=28.57 Aligned_cols=29 Identities=28% Similarity=0.171 Sum_probs=21.8
Q ss_pred ccc-cHH-HHHhHHHHHHHHC--CCeEEEEecC
Q 018901 292 KTG-GLG-DVAGALPKALARR--GHRVMVVAPH 320 (349)
Q Consensus 292 KtG-GLg-DVv~sLPkAL~~~--G~dVrVimPr 320 (349)
-|| |.+ --+-.|-+.|.+. |++|+|||=.
T Consensus 6 itGs~~~~~~~~~l~~~L~~~~~g~~V~vv~T~ 38 (234)
T TIGR02700 6 ITGAGHLLVESFQVMKELKREIEELRVSTFVSR 38 (234)
T ss_pred EeCccHhHHHHHHHHHHHHhhcCCCeEEEEECh
Confidence 345 333 5677788899999 9999999854
No 194
>PLN02253 xanthoxin dehydrogenase
Probab=21.14 E-value=92 Score=28.20 Aligned_cols=25 Identities=20% Similarity=0.522 Sum_probs=20.5
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
||-+.+..++.+.|+++|++|.++-
T Consensus 25 Gas~gIG~~la~~l~~~G~~v~~~~ 49 (280)
T PLN02253 25 GGATGIGESIVRLFHKHGAKVCIVD 49 (280)
T ss_pred CCCchHHHHHHHHHHHcCCEEEEEe
Confidence 5666777888999999999987763
No 195
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=21.02 E-value=1.6e+02 Score=28.37 Aligned_cols=25 Identities=32% Similarity=0.547 Sum_probs=21.4
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
||=+| .+.|.+.|.+.||+|.+.+-
T Consensus 7 GGT~e-gr~la~~L~~~g~~v~~s~~ 31 (256)
T TIGR00715 7 GGTVD-SRAIAKGLIAQGIEILVTVT 31 (256)
T ss_pred echHH-HHHHHHHHHhCCCeEEEEEc
Confidence 68888 99999999999999876554
No 196
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=21.00 E-value=1.5e+02 Score=26.38 Aligned_cols=37 Identities=30% Similarity=0.545 Sum_probs=26.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCe--EEEEecCCCC
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHR--VMVVAPHYGN 323 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~d--VrVimPrYg~ 323 (349)
|||+|+.+ |=+.+...+=.+|.+.+++ +..++..-..
T Consensus 1 mrI~~~~S---------g~~~~~~~~l~~l~~~~~~~~iv~Vit~~~~ 39 (181)
T PF00551_consen 1 MRIVFFGS---------GSGSFLKALLEALKARGHNVEIVLVITNPDK 39 (181)
T ss_dssp EEEEEEES---------SSSHHHHHHHHHHHTTSSEEEEEEEEESSTT
T ss_pred CEEEEEEc---------CCCHHHHHHHHHHHhCCCCceEEEEeccccc
Confidence 79999977 4447777778899999997 4445544343
No 197
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=20.95 E-value=1.4e+02 Score=28.35 Aligned_cols=26 Identities=31% Similarity=0.590 Sum_probs=22.2
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
|+|.+-..+.+.|.+.|++|.|+=..
T Consensus 7 GlG~mG~~mA~~L~~~g~~v~v~dr~ 32 (299)
T PRK12490 7 GLGKMGGNMAERLREDGHEVVGYDVN 32 (299)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEECC
Confidence 78889999999999999999887553
No 198
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=20.95 E-value=1e+02 Score=26.62 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=22.9
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-+||-+.+...|.+.|.++|++|.++.
T Consensus 3 ItG~~g~iG~~la~~l~~~G~~v~~~~ 29 (239)
T TIGR01830 3 VTGASRGIGRAIALKLAKEGAKVIITY 29 (239)
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 367777788889999999999998885
No 199
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.92 E-value=99 Score=26.84 Aligned_cols=24 Identities=29% Similarity=0.639 Sum_probs=20.0
Q ss_pred ccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 294 GGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 294 GGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
||-+.+...|.+.|+++|++|.++
T Consensus 12 Gasg~iG~~la~~l~~~g~~v~~~ 35 (247)
T PRK05565 12 GASGGIGRAIAELLAKEGAKVVIA 35 (247)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEE
Confidence 566677788899999999998777
No 200
>PRK07208 hypothetical protein; Provisional
Probab=20.89 E-value=1.4e+02 Score=29.62 Aligned_cols=39 Identities=31% Similarity=0.515 Sum_probs=29.4
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe--cCCCCC
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA--PHYGNY 324 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim--PrYg~i 324 (349)
|+.++|+.|.+ |++-.+.++ .|+++|++|.|+= ++.|..
T Consensus 2 ~~~~~vvIiGa---------GisGL~aA~--~L~~~g~~v~v~E~~~~~GG~ 42 (479)
T PRK07208 2 TNKKSVVIIGA---------GPAGLTAAY--ELLKRGYPVTVLEADPVVGGI 42 (479)
T ss_pred CCCCcEEEECc---------CHHHHHHHH--HHHHCCCcEEEEecCCCCCce
Confidence 34567888876 999888876 8899999999883 455543
No 201
>PRK08267 short chain dehydrogenase; Provisional
Probab=20.87 E-value=1.5e+02 Score=26.46 Aligned_cols=26 Identities=27% Similarity=0.295 Sum_probs=21.8
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-+.+..+|.+.|.++|++|.++-
T Consensus 7 tGasg~iG~~la~~l~~~G~~V~~~~ 32 (260)
T PRK08267 7 TGAASGIGRATALLFAAEGWRVGAYD 32 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 46777778888999999999988875
No 202
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=20.82 E-value=1.1e+02 Score=30.60 Aligned_cols=28 Identities=39% Similarity=0.379 Sum_probs=23.7
Q ss_pred cHHHHHhHHHHHHHHCCCeEEEEecCCC
Q 018901 295 GLGDVAGALPKALARRGHRVMVVAPHYG 322 (349)
Q Consensus 295 GLgDVv~sLPkAL~~~G~dVrVimPrYg 322 (349)
|+|-|-..+...|++.||+|.++=+.-.
T Consensus 7 GlG~~G~~lA~~La~~G~~V~~~d~~~~ 34 (411)
T TIGR03026 7 GLGYVGLPLAALLADLGHEVTGVDIDQE 34 (411)
T ss_pred CCCchhHHHHHHHHhcCCeEEEEECCHH
Confidence 7788888999999999999999876543
No 203
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=20.77 E-value=1e+02 Score=28.68 Aligned_cols=27 Identities=33% Similarity=0.330 Sum_probs=22.4
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-|||=|-+...|.+.|.++|++|+++.
T Consensus 10 VTGatG~iG~~l~~~L~~~g~~V~~~~ 36 (322)
T PLN02986 10 VTGASGYIASWIVKLLLLRGYTVKATV 36 (322)
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 356777888889999999999998765
No 204
>PLN02240 UDP-glucose 4-epimerase
Probab=20.77 E-value=91 Score=29.16 Aligned_cols=26 Identities=31% Similarity=0.442 Sum_probs=21.0
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||-|-+-..|.+.|.++|++|.++.
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 11 TGGAGYIGSHTVLQLLLAGYKVVVID 36 (352)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 36667777888999999999998873
No 205
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=20.75 E-value=1.7e+02 Score=27.57 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=29.4
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
||+|.+-+ .+.|--+.++.-|...|.+.|++|.|.
T Consensus 1 Mk~LIlYs-----tr~GqT~kIA~~iA~~L~e~g~qvdi~ 35 (175)
T COG4635 1 MKTLILYS-----TRDGQTRKIAEYIASHLRESGIQVDIQ 35 (175)
T ss_pred CceEEEEe-----cCCCcHHHHHHHHHHHhhhcCCeeeee
Confidence 67776655 578999999999999999999999874
No 206
>PLN02583 cinnamoyl-CoA reductase
Probab=20.73 E-value=99 Score=28.87 Aligned_cols=28 Identities=29% Similarity=0.164 Sum_probs=22.6
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEec
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVAP 319 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVimP 319 (349)
-|||=|-+...|.+.|.++||+|+++..
T Consensus 11 VTGatG~IG~~lv~~Ll~~G~~V~~~~R 38 (297)
T PLN02583 11 VMDASGYVGFWLVKRLLSRGYTVHAAVQ 38 (297)
T ss_pred EECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 3466677778889999999999998864
No 207
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=20.52 E-value=1.5e+02 Score=29.99 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=31.1
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPr 320 (349)
+.+||.||.- | ..|+.+|-.+-+..|.+|+|+.|.
T Consensus 152 ~g~k~a~vGD---------g-NNv~nSl~~~~a~~G~dv~ia~Pk 186 (310)
T COG0078 152 KGLKLAYVGD---------G-NNVANSLLLAAAKLGMDVRIATPK 186 (310)
T ss_pred cCcEEEEEcC---------c-chHHHHHHHHHHHhCCeEEEECCC
Confidence 4578988865 3 899999999999999999999998
No 208
>PRK12831 putative oxidoreductase; Provisional
Probab=20.46 E-value=2.2e+02 Score=29.10 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=25.7
Q ss_pred CCCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 275 ~~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
.+.++|+.|.+ |.|-+..+. .|+++|++|.||=
T Consensus 138 ~~~~~V~IIG~---------GpAGl~aA~--~l~~~G~~V~v~e 170 (464)
T PRK12831 138 KKGKKVAVIGS---------GPAGLTCAG--DLAKMGYDVTIFE 170 (464)
T ss_pred CCCCEEEEECc---------CHHHHHHHH--HHHhCCCeEEEEe
Confidence 45689999986 766666554 8899999999883
No 209
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=20.45 E-value=1.3e+02 Score=29.65 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=29.7
Q ss_pred CCceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEEecCC
Q 018901 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (349)
Q Consensus 276 ~~mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVimPrY 321 (349)
.+++|.||.- +.-|+.+|-.+++..|.+|+++.|.-
T Consensus 146 ~g~kva~vGD----------~~~v~~S~~~~~~~~g~~v~~~~P~~ 181 (302)
T PRK14805 146 SKVKLAYVGD----------GNNVTHSLMYGAAILGATMTVICPPG 181 (302)
T ss_pred CCcEEEEEcC----------CCccHHHHHHHHHHcCCEEEEECCch
Confidence 3478988843 34589999999999999999999974
No 210
>PRK06847 hypothetical protein; Provisional
Probab=20.34 E-value=1.6e+02 Score=27.96 Aligned_cols=29 Identities=38% Similarity=0.653 Sum_probs=24.2
Q ss_pred ceEEEEecccccccccccHHHHHhHHHHHHHHCCCeEEEE
Q 018901 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (349)
Q Consensus 278 mkILfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~dVrVi 317 (349)
++|+.|.+ |++-.+.++ +|++.|++|.|+
T Consensus 5 ~~V~IVGa---------G~aGl~~A~--~L~~~g~~v~v~ 33 (375)
T PRK06847 5 KKVLIVGG---------GIGGLSAAI--ALRRAGIAVDLV 33 (375)
T ss_pred ceEEEECC---------CHHHHHHHH--HHHhCCCCEEEE
Confidence 57888875 888888777 789999999888
No 211
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase. Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....
Probab=20.22 E-value=1.2e+02 Score=28.87 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=24.8
Q ss_pred EEEecccccccccccHHHHHhHHHHHHHHCCC
Q 018901 281 ILVAAECGPWSKTGGLGDVAGALPKALARRGH 312 (349)
Q Consensus 281 LfVSsE~aPfaKtGGLgDVv~sLPkAL~~~G~ 312 (349)
+|+...--|.+-+||-|||...+--+|..+|.
T Consensus 172 ~~~n~~gn~~la~gGsGDvLaGii~~llaq~~ 203 (242)
T PF01256_consen 172 VYVNPTGNPGLATGGSGDVLAGIIAGLLAQGY 203 (242)
T ss_dssp EEEE----GGGSSTTHHHHHHHHHHHHHHHTS
T ss_pred eeEeCCCCCCCCCCCcccHHHHHHHHHHHccC
Confidence 45556667999999999999999999988886
No 212
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=20.21 E-value=1.2e+02 Score=28.26 Aligned_cols=27 Identities=30% Similarity=0.304 Sum_probs=22.6
Q ss_pred ccccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 292 KtGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
-|||-|-+-..|.+.|.++|++|.++.
T Consensus 10 VtG~~G~IG~~l~~~L~~~G~~V~~~~ 36 (325)
T PLN02989 10 VTGASGYIASWIVKLLLFRGYTINATV 36 (325)
T ss_pred EECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 357788888999999999999998764
No 213
>PRK09072 short chain dehydrogenase; Provisional
Probab=20.05 E-value=1e+02 Score=27.66 Aligned_cols=26 Identities=42% Similarity=0.681 Sum_probs=20.8
Q ss_pred cccHHHHHhHHHHHHHHCCCeEEEEe
Q 018901 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (349)
Q Consensus 293 tGGLgDVv~sLPkAL~~~G~dVrVim 318 (349)
+||=+-+...|.+.|.++|++|.++-
T Consensus 11 tG~s~~iG~~ia~~l~~~G~~V~~~~ 36 (263)
T PRK09072 11 TGASGGIGQALAEALAAAGARLLLVG 36 (263)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 45666666888999999999988875
Done!