BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018902
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q180F3|DNLJ_CLOD6 DNA ligase OS=Clostridium difficile (strain 630) GN=ligA PE=3 SV=2
Length = 674
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 98 NHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRK 157
N DS E S + D + +L L EEH +R+D PT + VGG+P Q + +
Sbjct: 23 NQDS---PEISDYEYDKLMKELISLEEEHPELKRIDSPTNR---VGGKPLDKFNQIVHKT 76
Query: 158 RLLSVR--YGVQDMDESAKRI 176
+LS+ + QD+ + KR+
Sbjct: 77 PMLSLSNAFSEQDLRDFDKRV 97
>sp|O74763|YBE8_SCHPO Uncharacterized WD repeat-containing protein C17D11.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC17D11.08 PE=1 SV=1
Length = 435
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 54 QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDS 101
+E + +QLLK L TGD GN ++E Q+ +LE+P +L N S
Sbjct: 76 EEPNNMIQLLK----LITGDDGNSHLEKAQAATDLEYPVTKLLWNPSS 119
>sp|Q9Z7X6|Y578_CHLPN Uncharacterized metallophosphoesterase
CPn_0578/CP_0170/CPj0578/CpB0602 OS=Chlamydia pneumoniae
GN=CPn_0578 PE=3 SV=1
Length = 320
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 18/99 (18%)
Query: 39 VRIVIVGDVH-----DDWDLQEDSKALQLLKPDLVLFTGDF-------GNENVEIVQSVA 86
+RI + D+H + L + SK+++ PDL++F GD E +E +
Sbjct: 45 LRIAQISDLHFHKRVPEKFLNKVSKSIKNFSPDLIVFCGDLLCRARLEDKERLETFLNTL 104
Query: 87 ELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEE 125
E ILGNHD +S + ++ C+ EE
Sbjct: 105 EAPLGVFAILGNHD------YSSYISRNTKGEITCIPEE 137
>sp|D5V0N9|CPDA_ARCNC 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
OS=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299
/ LMG 7604 / NCTC 12251 / CI) GN=cpdA PE=3 SV=1
Length = 273
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 35/153 (22%)
Query: 64 KPDLVLFTGDF----GNENVEIV-QSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQ 118
KPDLV+FTGD NE ++ ++V L+ P VI GNHD+ + + ++ D +
Sbjct: 41 KPDLVIFTGDITDNGTNEEYKLFKETVKLLDVPFYVIPGNHDNAENLKREFEEYDWFE-- 98
Query: 119 LECLGEEHVAYRRLDFPT----LKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAK 174
H++ DFP L SI G S GG + +RLL + K
Sbjct: 99 ----ENNHLSLVIEDFPIRIIGLDSSIKGK---SYGG--LSEERLLWLE----------K 139
Query: 175 RIYKVALGTPDDHLVILLAHNGPSGLGSEPNDI 207
++ K D V+L H+ P +G E D+
Sbjct: 140 QLNKFP-----DKKVLLFIHHPPVKIGIEHMDV 167
>sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis
thaliana GN=PAP28 PE=2 SV=1
Length = 397
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 9/46 (19%)
Query: 64 KPDLVLFTGD--FGNENVEIVQSVAE-----LEF--PKAVILGNHD 100
+PDL+ FTGD FG+ + +S+ E +E+ P A +LGNHD
Sbjct: 104 RPDLIAFTGDNIFGSSTTDAAESLLEAIGPAIEYGIPWAAVLGNHD 149
>sp|O67153|Y1054_AQUAE Uncharacterized metallophosphoesterase aq_1054 OS=Aquifex aeolicus
(strain VF5) GN=aq_1054 PE=3 SV=1
Length = 261
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 1 MLSALSHAQALSFFSHSFLCLSTSPKTARSAPAMSASVVRIVIVGDVHDDWDLQED---- 56
+L A SH + ++F L T + + ++I+ D+H ++ED
Sbjct: 6 LLGAYSHLE--TYF------LRVEKYTIETEKLPKGTEIKIMNASDMHLGPVMREDRVEM 57
Query: 57 -SKALQLLKPDLVLFTGDFGNENVE----IVQSVAELEFP--KAVILGNHDSW 102
+ + KPD+++ TGD + N++ + Q +AEL P K +LGNH+ +
Sbjct: 58 VKRVYEREKPDILVATGDTVDGNMKNLDYLAQMLAELNPPLGKFAVLGNHEYY 110
>sp|Q9FYB9|CHX11_ARATH Cation/H(+) antiporter 11 OS=Arabidopsis thaliana GN=CHX11 PE=2
SV=2
Length = 783
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 26 KTARSAPAMSASVVRIVIVGDVHDDWDLQEDSKALQLLKP----DLVLFTGDFGNENVEI 81
K + P + +V+R++ ++ +WD D++ L+ LK + +L+T VE+
Sbjct: 657 KRMKYNPRVRVTVIRLIFDHEIESEWDYILDNEGLKDLKSTESNEDILYTERIVTSVVEV 716
Query: 82 VQSVAEL--EFPKAVILGNHDSWKTQEFSG 109
V++V L E+ V+ +HD +Q+ SG
Sbjct: 717 VKAVQLLAEEYDLMVVGRDHD-MTSQDLSG 745
>sp|O84467|Y461_CHLTR Uncharacterized metallophosphoesterase CT_461 OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=CT_461 PE=3 SV=1
Length = 329
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 39 VRIVIVGDVH-----DDWDLQEDSKALQLLKPDLVLFTGDF-GNENVEIVQS----VAEL 88
+RIV + D+H D L++ S+ + L PD+++FTGDF VE + + L
Sbjct: 52 LRIVQISDLHLNHSTPDAFLKKVSRKISSLSPDILVFTGDFVCRAKVETPERLKHFLCSL 111
Query: 89 EFPKAVI--LGNHD--SWKTQEFSGK 110
P LGNHD ++ +++ GK
Sbjct: 112 HAPLGCFACLGNHDYATYVSRDIHGK 137
>sp|O34870|YKUE_BACSU Uncharacterized metallophosphoesterase YkuE OS=Bacillus subtilis
(strain 168) GN=ykuE PE=3 SV=2
Length = 286
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 40 RIVIVGDVH-DDWDLQEDSKALQLL----KPDLVLFTGDF--GNENVEIVQSVAEL---- 88
+IV D H D+ ED K + L KPDL++FTGD + + Q+V L
Sbjct: 59 KIVQFSDAHLSDYFTLEDLKTVILTINESKPDLIVFTGDIIDNPDTYQHHQAVIPLLRKL 118
Query: 89 --EFPKAVILGNHD 100
F K I GNHD
Sbjct: 119 NAPFGKLCIYGNHD 132
>sp|Q9PJT2|Y746_CHLMU Uncharacterized metallophosphoesterase TC_0746 OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=TC_0746 PE=3 SV=1
Length = 329
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 39 VRIVIVGDVH-----DDWDLQEDSKALQLLKPDLVLFTGDF-GNENVE----IVQSVAEL 88
+RIV + D+H D L++ S+ + L PD+++FTGDF VE + + L
Sbjct: 52 LRIVQISDLHLNQSTPDAFLKKISRKVSSLSPDMLVFTGDFICRAKVESSNKLKNFLCSL 111
Query: 89 EFPKAVI--LGNHD--SWKTQEFSGK 110
P LGNHD ++ +++ GK
Sbjct: 112 NAPLGCFACLGNHDYATYVSRDIHGK 137
>sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29 OS=Arabidopsis
thaliana GN=PAP29 PE=2 SV=1
Length = 389
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 57 SKALQLLKPDLVLFTGD--FGNENVEIVQSVAEL-------EFPKAVILGNHDSWKT 104
S+ + KPDL++FTGD FG + + ++S+ + P ILGNHD T
Sbjct: 86 SRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQEST 142
>sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2
SV=2
Length = 783
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 26 KTARSAPAMSASVVRIVIVGDVHDDWDLQEDSKALQLLKPDL----VLFTGDFGNENVEI 81
K ++ P + +V+R+V ++ DWD D++ L+ LK + + +VE+
Sbjct: 657 KRMKNNPRIRVTVIRLVFDHEIESDWDYILDNEGLKDLKSTEDNKDIDYIERIVTSSVEV 716
Query: 82 VQSVAEL--EFPKAVILGNHDSWKTQEFSG 109
V++V L E+ V+ +HD +Q+ SG
Sbjct: 717 VKAVQLLAEEYDLMVVGRDHD-MTSQDLSG 745
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,449,572
Number of Sequences: 539616
Number of extensions: 5794769
Number of successful extensions: 13001
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12996
Number of HSP's gapped (non-prelim): 20
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)