Query 018903
Match_columns 349
No_of_seqs 202 out of 1632
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 07:50:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eno_A Putative O-sialoglycopr 100.0 1.9E-74 6.4E-79 551.1 38.2 328 1-338 3-331 (334)
2 2ivn_A O-sialoglycoprotein end 100.0 3.8E-67 1.3E-71 500.6 37.2 325 4-338 1-326 (330)
3 3en9_A Glycoprotease, O-sialog 100.0 6E-66 2.1E-70 522.7 37.8 330 1-341 3-333 (540)
4 3ven_A O-carbamoyltransferase 100.0 1.1E-51 3.8E-56 413.5 22.2 315 1-336 7-385 (576)
5 3vth_A Hydrogenase maturation 100.0 5.1E-35 1.8E-39 302.6 34.7 278 6-314 402-751 (761)
6 3ttc_A HYPF, transcriptional r 100.0 1.5E-34 5.2E-39 293.9 31.4 269 6-309 305-650 (657)
7 4g9i_A Hydrogenase maturation 100.0 3.9E-35 1.3E-39 304.9 25.6 276 15-315 408-766 (772)
8 4ehu_A Activator of 2-hydroxyi 100.0 5.7E-27 1.9E-31 217.4 28.8 252 4-312 1-258 (276)
9 3r6m_A YEAZ, resuscitation pro 99.9 2.9E-24 9.8E-29 191.2 14.4 146 3-164 1-151 (213)
10 2gel_A Putative GRAM negative 99.9 9.5E-24 3.2E-28 190.9 14.1 123 5-143 2-124 (231)
11 2a6a_A Hypothetical protein TM 99.9 3.8E-23 1.3E-27 184.9 15.9 145 5-168 13-160 (218)
12 1hux_A Activator of (R)-2-hydr 99.8 6.3E-18 2.1E-22 156.3 28.7 250 1-307 1-253 (270)
13 2ews_A Pantothenate kinase; PA 99.8 3.1E-16 1.1E-20 145.4 26.1 236 3-291 19-272 (287)
14 2i7n_A Pantothenate kinase 1; 99.2 1.9E-09 6.4E-14 102.5 21.8 209 60-291 84-344 (360)
15 3h1q_A Ethanolamine utilizatio 98.5 3.5E-05 1.2E-09 70.0 22.6 240 3-306 27-270 (272)
16 3ezw_A Glycerol kinase; glycer 98.2 0.00059 2E-08 68.2 26.7 88 227-321 371-460 (526)
17 2qm1_A Glucokinase; alpha-beta 98.2 0.00053 1.8E-08 63.8 22.9 107 5-120 7-125 (326)
18 3ifr_A Carbohydrate kinase, FG 98.1 0.0012 4E-08 65.8 26.1 87 227-320 370-457 (508)
19 2ch5_A NAGK protein; transfera 98.1 0.0067 2.3E-07 56.8 31.4 106 4-119 6-117 (347)
20 3qbx_A Anhydro-N-acetylmuramic 97.9 0.0099 3.4E-07 56.3 26.7 284 4-318 2-345 (371)
21 3ll3_A Gluconate kinase; xylul 97.9 0.0092 3.2E-07 59.2 27.8 87 227-320 363-450 (504)
22 2gup_A ROK family protein; sug 97.9 0.0068 2.3E-07 55.4 24.8 252 3-308 3-285 (292)
23 4htl_A Beta-glucoside kinase; 97.9 0.0052 1.8E-07 56.5 23.4 76 233-311 214-292 (297)
24 3cqy_A Anhydro-N-acetylmuramic 97.8 0.01 3.5E-07 56.3 23.7 285 1-319 2-352 (370)
25 4db3_A Glcnac kinase, N-acetyl 97.7 0.0073 2.5E-07 56.4 21.7 103 3-119 23-136 (327)
26 1saz_A Probable butyrate kinas 97.6 0.013 4.6E-07 55.9 22.9 99 232-344 269-370 (381)
27 2hoe_A N-acetylglucosamine kin 97.6 0.0027 9.2E-08 60.6 17.8 107 4-119 87-204 (380)
28 2e2o_A Hexokinase; acetate and 97.6 0.039 1.3E-06 50.4 29.4 71 232-308 215-285 (299)
29 1z05_A Transcriptional regulat 97.5 0.0098 3.4E-07 57.6 20.6 108 3-120 107-225 (429)
30 3vov_A Glucokinase, hexokinase 97.5 0.02 6.7E-07 52.8 21.8 74 232-308 213-293 (302)
31 2aa4_A Mannac kinase, putative 97.5 0.0038 1.3E-07 56.9 16.5 73 232-307 209-285 (289)
32 3r8e_A Hypothetical sugar kina 97.5 0.029 9.9E-07 52.0 22.7 264 4-308 19-317 (321)
33 3vgl_A Glucokinase; ROK family 97.5 0.0082 2.8E-07 55.8 18.5 73 232-307 228-309 (321)
34 2yhw_A Bifunctional UDP-N-acet 97.5 0.042 1.4E-06 51.3 23.5 106 4-120 30-148 (343)
35 1zbs_A Hypothetical protein PG 97.3 0.037 1.3E-06 50.6 21.0 127 6-150 2-132 (291)
36 1z6r_A MLC protein; transcript 97.3 0.011 3.6E-07 56.9 18.0 108 3-120 84-203 (406)
37 3htv_A D-allose kinase, alloki 97.0 0.2 6.9E-06 46.1 23.2 99 4-115 7-119 (310)
38 2ap1_A Putative regulator prot 96.9 0.14 4.6E-06 47.4 20.1 102 4-119 24-136 (327)
39 3d2f_A Heat shock protein homo 96.8 0.2 6.7E-06 51.5 22.5 53 256-314 334-386 (675)
40 4ijn_A Acetate kinase, acetoki 96.8 0.094 3.2E-06 50.0 18.2 67 4-79 23-92 (398)
41 2p3r_A Glycerol kinase; glycer 96.4 0.017 5.9E-07 57.3 11.2 87 227-320 370-458 (510)
42 3g25_A Glycerol kinase; IDP007 96.4 0.027 9.4E-07 55.7 12.4 87 227-320 373-461 (501)
43 3h3n_X Glycerol kinase; ATP-bi 96.2 0.031 1.1E-06 55.3 11.6 87 227-320 372-460 (506)
44 2w40_A Glycerol kinase, putati 96.1 0.031 1.1E-06 55.3 10.9 86 227-319 375-463 (503)
45 3epq_A Putative fructokinase; 96.0 0.94 3.2E-05 41.4 20.7 96 3-119 2-113 (302)
46 2zf5_O Glycerol kinase; hypert 96.0 0.03 1E-06 55.4 10.1 85 227-318 364-448 (497)
47 2d4w_A Glycerol kinase; alpha 95.9 0.035 1.2E-06 54.9 10.6 86 227-319 372-459 (504)
48 2e1z_A Propionate kinase; TDCD 95.9 1.2 4.3E-05 42.6 20.8 52 255-310 329-406 (415)
49 2itm_A Xylulose kinase, xylulo 95.9 0.032 1.1E-06 54.9 9.9 86 227-318 356-442 (484)
50 2dpn_A Glycerol kinase; thermu 95.8 0.036 1.2E-06 54.7 10.1 82 227-315 367-450 (495)
51 4e1j_A Glycerol kinase; struct 95.8 0.039 1.3E-06 54.9 10.2 87 227-320 392-482 (520)
52 3hz6_A Xylulokinase; xylulose, 95.7 0.064 2.2E-06 53.2 11.5 84 227-318 374-458 (511)
53 3r9p_A ACKA; ssgcid, seattle s 95.7 0.81 2.8E-05 43.4 18.4 69 4-79 12-83 (391)
54 3l0q_A Xylulose kinase; xlylul 95.6 0.023 7.7E-07 57.0 7.7 85 228-320 410-499 (554)
55 3h3n_X Glycerol kinase; ATP-bi 95.3 0.045 1.6E-06 54.2 8.6 80 1-81 1-82 (506)
56 3i8b_A Xylulose kinase; strain 95.3 0.11 3.8E-06 51.5 11.3 81 228-316 395-477 (515)
57 1zc6_A Probable N-acetylglucos 95.2 0.97 3.3E-05 41.1 16.9 102 5-119 12-117 (305)
58 4e1j_A Glycerol kinase; struct 95.1 0.052 1.8E-06 54.0 8.4 76 5-81 27-103 (520)
59 3qfu_A 78 kDa glucose-regulate 95.1 2.2 7.7E-05 39.9 20.3 49 256-309 343-391 (394)
60 3djc_A Type III pantothenate k 95.0 0.16 5.3E-06 46.0 10.4 62 5-80 3-64 (266)
61 2h3g_X Biosynthetic protein; p 94.9 2 6.9E-05 38.6 20.2 62 6-80 2-63 (268)
62 3g25_A Glycerol kinase; IDP007 94.9 0.065 2.2E-06 53.0 8.3 79 1-81 4-83 (501)
63 3mcp_A Glucokinase; structural 94.8 1.2 4E-05 42.1 16.6 100 3-119 8-124 (366)
64 2p3r_A Glycerol kinase; glycer 94.8 0.078 2.7E-06 52.5 8.6 77 4-81 3-80 (510)
65 3sk3_A Acetate kinase, acetoki 94.7 0.31 1.1E-05 46.8 12.3 53 233-285 314-369 (415)
66 3hz6_A Xylulokinase; xylulose, 94.7 0.075 2.6E-06 52.7 8.2 75 5-81 6-81 (511)
67 3l0q_A Xylulose kinase; xlylul 94.6 0.17 6E-06 50.5 10.8 80 1-81 1-82 (554)
68 2uyt_A Rhamnulokinase; rhamnos 94.5 0.33 1.1E-05 47.6 12.4 81 226-314 361-443 (489)
69 3jvp_A Ribulokinase; PSI-II, N 94.5 0.055 1.9E-06 54.4 6.9 86 227-320 409-501 (572)
70 2iir_A Acetate kinase; transfe 94.1 4.3 0.00015 38.7 19.8 30 255-284 321-351 (403)
71 3bex_A Type III pantothenate k 94.0 3.1 0.0001 37.0 16.9 63 1-80 1-63 (249)
72 3jvp_A Ribulokinase; PSI-II, N 93.9 0.26 9E-06 49.4 10.3 80 1-81 1-94 (572)
73 2zf5_O Glycerol kinase; hypert 93.8 0.16 5.4E-06 50.1 8.4 75 5-81 4-80 (497)
74 2dpn_A Glycerol kinase; thermu 93.5 0.18 6.2E-06 49.6 8.2 76 5-81 3-79 (495)
75 3i8b_A Xylulose kinase; strain 93.4 0.14 4.7E-06 50.9 7.2 70 1-81 1-72 (515)
76 4bc3_A Xylulose kinase; transf 93.3 0.17 6E-06 50.4 7.8 79 228-314 405-485 (538)
77 1vhx_A Putative holliday junct 93.0 0.18 6.1E-06 41.6 6.2 89 4-111 3-97 (150)
78 2w40_A Glycerol kinase, putati 92.5 0.29 1E-05 48.2 8.0 76 5-81 5-83 (503)
79 1hjr_A Holliday junction resol 91.7 0.35 1.2E-05 40.1 6.4 23 4-26 1-23 (158)
80 2d4w_A Glycerol kinase; alpha 91.4 0.5 1.7E-05 46.5 8.4 77 4-81 2-79 (504)
81 3h6e_A Carbohydrate kinase, FG 91.3 0.35 1.2E-05 47.6 6.9 70 5-81 7-76 (482)
82 4bc3_A Xylulose kinase; transf 91.0 0.52 1.8E-05 46.9 8.0 78 4-81 10-98 (538)
83 1iv0_A Hypothetical protein; r 90.2 1.8 6.2E-05 32.7 8.7 88 4-112 1-93 (98)
84 2uyt_A Rhamnulokinase; rhamnos 89.8 0.18 6.3E-06 49.4 3.5 78 1-81 1-81 (489)
85 4ep4_A Crossover junction endo 89.8 0.83 2.9E-05 38.2 7.0 23 4-26 1-23 (166)
86 1woq_A Inorganic polyphosphate 89.0 1.9 6.4E-05 38.4 9.4 108 2-119 10-130 (267)
87 3i33_A Heat shock-related 70 k 88.2 0.87 3E-05 43.1 6.9 53 256-313 351-403 (404)
88 2yhx_A Hexokinase B; transfera 87.7 21 0.00072 34.5 23.0 80 231-313 356-449 (457)
89 2itm_A Xylulose kinase, xylulo 87.6 2 6.8E-05 41.9 9.2 73 6-81 2-75 (484)
90 1dkg_D Molecular chaperone DNA 86.1 1.9 6.3E-05 40.4 7.8 58 244-307 316-378 (383)
91 1nu0_A Hypothetical protein YQ 85.0 5.5 0.00019 32.0 9.0 89 5-113 4-97 (138)
92 2v7y_A Chaperone protein DNAK; 84.8 2.9 9.9E-05 41.1 8.8 53 256-314 302-354 (509)
93 4gni_A Putative heat shock pro 84.1 4.5 0.00016 38.1 9.6 66 244-310 327-400 (409)
94 2q2r_A Glucokinase 1, putative 83.9 5.3 0.00018 37.3 9.9 73 232-307 280-368 (373)
95 1jce_A ROD shape-determining p 83.3 1.7 5.9E-05 40.0 6.1 44 258-307 279-322 (344)
96 4b9q_A Chaperone protein DNAK; 82.5 3 0.0001 42.0 7.9 67 244-316 316-387 (605)
97 1zxo_A Conserved hypothetical 81.1 4.2 0.00014 36.6 7.7 115 6-139 2-118 (291)
98 4a2a_A Cell division protein F 78.4 47 0.0016 31.5 22.3 30 257-289 329-358 (419)
99 2zgy_A Plasmid segregation pro 74.3 7.4 0.00025 35.4 7.3 43 130-172 167-211 (320)
100 4h0o_A Acetate kinase; askha ( 74.0 5.5 0.00019 37.9 6.3 50 236-285 305-356 (404)
101 1yuw_A Heat shock cognate 71 k 73.7 5.4 0.00019 39.6 6.7 54 256-314 330-383 (554)
102 3bzc_A TEX; helix-turn-helix, 72.3 39 0.0013 35.1 12.7 98 3-120 328-429 (785)
103 1sz2_A Glucokinase, glucose ki 72.0 32 0.0011 31.3 11.1 96 4-121 14-120 (332)
104 1g99_A Acetate kinase; alpha/b 68.8 22 0.00075 33.8 9.3 53 255-311 321-397 (408)
105 2kho_A Heat shock protein 70; 68.4 4.7 0.00016 40.5 4.8 53 256-314 333-385 (605)
106 1bdg_A Hexokinase; phosphotran 67.6 20 0.00068 34.6 9.0 73 231-307 365-443 (451)
107 3khy_A Propionate kinase; csgi 67.0 6 0.0002 37.4 4.9 32 255-286 312-344 (384)
108 3h6e_A Carbohydrate kinase, FG 65.9 13 0.00044 36.3 7.3 56 230-291 362-420 (482)
109 2ych_A Competence protein PILM 65.9 80 0.0027 28.8 25.8 31 256-289 306-336 (377)
110 1zxo_A Conserved hypothetical 63.6 1.5 5.2E-05 39.6 0.1 55 256-320 232-286 (291)
111 3zyy_X Iron-sulfur cluster bin 62.5 19 0.00066 36.3 7.9 78 3-83 205-299 (631)
112 1sz2_A Glucokinase, glucose ki 61.7 38 0.0013 30.7 9.4 73 232-308 240-324 (332)
113 2w6k_A COBE; biosynthetic prot 60.3 20 0.0007 28.9 6.4 50 55-111 26-75 (145)
114 2fxu_A Alpha-actin-1, actin, a 59.2 12 0.00043 34.7 5.6 48 257-307 294-346 (375)
115 3psf_A Transcription elongatio 58.7 39 0.0013 36.1 9.8 100 4-120 519-630 (1030)
116 1woq_A Inorganic polyphosphate 55.2 17 0.0006 31.9 5.7 62 244-313 202-264 (267)
117 4h0p_A Acetate kinase; askha ( 53.4 20 0.00068 34.4 5.9 53 233-285 322-382 (438)
118 3il3_A 3-oxoacyl-[acyl-carrier 51.7 26 0.00089 31.9 6.4 26 54-79 224-249 (323)
119 3lma_A Stage V sporulation pro 51.6 87 0.003 29.0 9.9 44 58-107 211-254 (347)
120 3psi_A Transcription elongatio 51.3 60 0.0021 35.4 9.9 96 4-120 516-627 (1219)
121 2d0o_A DIOL dehydratase-reacti 51.2 47 0.0016 33.0 8.2 67 5-79 3-73 (610)
122 4dfe_A 3-oxoacyl-[acyl-carrier 50.8 25 0.00086 32.0 6.1 26 54-79 234-259 (333)
123 3h78_A PQS biosynthetic enzyme 50.5 24 0.0008 32.8 5.9 41 54-99 254-294 (359)
124 2f9w_A Pantothenate kinase; CO 50.3 90 0.0031 27.8 9.5 31 1-32 21-51 (271)
125 4ewp_A 3-oxoacyl-[acyl-carrier 50.0 17 0.00058 33.4 4.8 44 54-106 249-292 (350)
126 3hb7_A Isochorismatase hydrola 48.9 7.9 0.00027 33.0 2.2 86 253-345 116-202 (204)
127 4efi_A 3-oxoacyl-(acyl-carrier 48.4 25 0.00087 32.4 5.8 27 54-80 244-270 (354)
128 3gwa_A 3-oxoacyl-(acyl-carrier 48.4 24 0.00081 32.8 5.6 41 54-99 266-306 (365)
129 3s21_A 3-oxoacyl-[ACP] synthas 44.8 28 0.00095 31.9 5.4 40 55-99 247-286 (345)
130 4e1l_A Acetoacetyl-COA thiolas 42.7 37 0.0013 31.7 6.1 28 54-81 31-58 (395)
131 2x3e_A 3-oxoacyl-[acyl-carrier 42.5 29 0.00099 31.5 5.1 41 54-99 224-264 (331)
132 1cza_N Hexokinase type I; stru 42.5 31 0.0011 36.4 6.0 58 4-70 78-144 (917)
133 4dd5_A Acetyl-COA acetyltransf 42.4 36 0.0012 31.9 5.9 28 54-81 33-60 (396)
134 1mzj_A Beta-ketoacylsynthase I 42.3 29 0.001 31.5 5.2 41 54-99 231-271 (339)
135 1k8k_A ARP3, actin-like protei 42.0 36 0.0012 31.9 5.9 25 258-282 317-341 (418)
136 3lma_A Stage V sporulation pro 40.7 48 0.0016 30.8 6.2 49 55-111 58-107 (347)
137 1hnj_A Beta-ketoacyl-acyl carr 39.9 33 0.0011 30.7 5.0 38 55-97 219-256 (317)
138 1zow_A 3-oxoacyl-[acyl-carrier 38.9 41 0.0014 30.0 5.5 40 55-99 213-252 (313)
139 2qh9_A UPF0215 protein AF_1433 38.6 69 0.0024 26.8 6.5 29 1-30 4-36 (184)
140 3ss6_A Acetyl-COA acetyltransf 37.8 39 0.0013 31.6 5.3 28 54-81 31-58 (394)
141 3o8m_A Hexokinase; rnaseh-like 37.2 2.5E+02 0.0086 27.1 11.1 71 5-81 81-156 (485)
142 1u6e_A 3-oxoacyl-[acyl-carrier 36.3 42 0.0014 30.3 5.2 40 55-99 233-272 (335)
143 1zc6_A Probable N-acetylglucos 36.2 18 0.0006 32.5 2.5 47 231-278 226-274 (305)
144 4apw_A ALP12; actin-like prote 35.5 1.4E+02 0.0046 27.0 8.6 44 130-173 175-219 (329)
145 2q2r_A Glucokinase 1, putative 35.4 46 0.0016 30.7 5.4 29 4-32 29-61 (373)
146 3h78_A PQS biosynthetic enzyme 35.4 63 0.0021 29.8 6.3 27 55-81 77-103 (359)
147 1ted_A PKS18; thiolase fold, s 34.3 44 0.0015 31.2 5.1 26 54-79 287-312 (393)
148 4dfe_A 3-oxoacyl-[acyl-carrier 33.6 46 0.0016 30.2 5.0 27 55-81 68-94 (333)
149 3hu5_A Isochorismatase family 33.2 69 0.0024 26.8 5.7 75 253-340 122-197 (204)
150 1yac_A Ycacgp, YCAC gene produ 33.0 85 0.0029 26.4 6.3 38 253-292 101-138 (208)
151 2ebd_A 3-oxoacyl-[acyl-carrier 32.1 46 0.0016 29.6 4.6 26 55-80 211-236 (309)
152 1ub7_A 3-oxoacyl-[acyl-carrier 31.9 38 0.0013 30.4 4.1 27 54-80 220-246 (322)
153 3led_A 3-oxoacyl-acyl carrier 31.6 60 0.0021 30.4 5.5 40 55-99 292-331 (392)
154 1nf9_A Phenazine biosynthesis 31.3 82 0.0028 26.4 5.9 38 253-292 138-175 (207)
155 3eef_A N-carbamoylsarcosine am 31.3 86 0.0029 25.7 5.9 38 253-292 106-143 (182)
156 2w36_A Endonuclease V; hypoxan 30.8 2.6E+02 0.0089 24.1 11.1 93 5-111 38-138 (225)
157 3goa_A 3-ketoacyl-COA thiolase 30.7 70 0.0024 29.8 5.8 28 54-81 29-57 (387)
158 3goc_A Endonuclease V; alpha-b 30.5 2.7E+02 0.0092 24.2 11.9 94 4-111 40-142 (237)
159 4efi_A 3-oxoacyl-(acyl-carrier 30.5 56 0.0019 30.0 5.0 26 56-81 70-95 (354)
160 1k8k_B ARP2, actin-like protei 29.2 42 0.0014 31.4 3.9 25 258-282 299-323 (394)
161 1j2r_A Hypothetical isochorism 29.0 96 0.0033 25.7 5.9 38 253-292 128-165 (199)
162 3il3_A 3-oxoacyl-[acyl-carrier 28.9 64 0.0022 29.2 5.1 26 56-81 62-87 (323)
163 3khy_A Propionate kinase; csgi 28.4 1.7E+02 0.0058 27.5 7.8 75 1-79 1-84 (384)
164 1u0m_A Putative polyketide syn 28.3 50 0.0017 30.6 4.3 43 54-106 253-295 (382)
165 3s21_A 3-oxoacyl-[ACP] synthas 28.2 73 0.0025 29.0 5.4 30 56-85 72-102 (345)
166 3nwp_A 6-phosphogluconolactona 28.2 62 0.0021 28.0 4.6 45 228-276 13-57 (233)
167 3a9l_A Poly-gamma-glutamate hy 28.1 47 0.0016 28.6 3.7 37 259-297 111-147 (216)
168 3mcw_A Putative hydrolase; iso 28.1 96 0.0033 25.8 5.7 38 253-292 109-146 (198)
169 3by5_A Cobalamin biosynthesis 28.0 1.3E+02 0.0046 24.3 6.3 47 55-111 25-71 (155)
170 1im5_A 180AA long hypothetical 27.9 1.1E+02 0.0036 24.9 5.9 38 253-292 116-153 (180)
171 3tg2_A Vibriobactin-specific i 27.9 94 0.0032 26.6 5.7 55 253-310 134-188 (223)
172 1ytl_A Acetyl-COA decarboxylas 27.7 89 0.003 25.8 5.3 73 257-331 36-123 (174)
173 1j5p_A Aspartate dehydrogenase 27.6 1.4E+02 0.005 26.2 6.9 42 255-296 83-124 (253)
174 3s3l_A CERJ; acyltransferase, 27.5 94 0.0032 28.5 6.1 52 56-111 58-113 (357)
175 4h17_A Hydrolase, isochorismat 27.5 1E+02 0.0034 25.7 5.7 38 253-292 119-156 (197)
176 3gwa_A 3-oxoacyl-(acyl-carrier 27.4 60 0.0021 30.0 4.7 31 55-85 83-114 (365)
177 1u6e_A 3-oxoacyl-[acyl-carrier 27.3 84 0.0029 28.2 5.6 29 54-82 63-91 (335)
178 3s3l_A CERJ; acyltransferase, 27.2 40 0.0014 31.2 3.3 26 54-79 238-263 (357)
179 3lqy_A Putative isochorismatas 27.0 1.1E+02 0.0039 25.1 5.9 38 253-292 109-146 (190)
180 3eb9_A 6-phosphogluconolactona 27.0 1.2E+02 0.004 26.7 6.4 50 240-289 20-73 (266)
181 3ot4_A Putative isochorismatas 26.7 1.2E+02 0.0042 26.1 6.3 38 253-292 155-192 (236)
182 3irv_A Cysteine hydrolase; str 26.6 1.1E+02 0.0037 26.3 5.9 38 253-292 135-172 (233)
183 3dpi_A NAD+ synthetase; ssgcid 26.3 2.3E+02 0.0078 25.3 8.1 26 241-266 30-57 (285)
184 2a67_A Isochorismatase family 26.1 1.4E+02 0.0047 24.0 6.2 38 253-292 97-134 (167)
185 4ewp_A 3-oxoacyl-[acyl-carrier 25.9 43 0.0015 30.5 3.3 29 57-85 67-96 (350)
186 3oqp_A Putative isochorismatas 25.8 1.1E+02 0.0037 25.9 5.7 38 253-292 105-142 (211)
187 1u6z_A Exopolyphosphatase; alp 25.7 4.6E+02 0.016 25.3 17.0 139 2-149 9-159 (513)
188 3oc6_A 6-phosphogluconolactona 25.6 88 0.003 27.3 5.2 37 240-276 23-59 (248)
189 3euo_A Type III pentaketide sy 25.3 78 0.0027 29.4 5.0 26 57-82 86-111 (379)
190 3il6_A 3-oxoacyl-[acyl-carrier 25.2 83 0.0028 28.3 5.1 30 56-85 56-86 (321)
191 3lhi_A Putative 6-phosphogluco 25.2 63 0.0021 27.9 4.1 44 229-276 11-54 (232)
192 3ico_A 6PGL, 6-phosphogluconol 25.0 90 0.0031 27.6 5.2 38 240-277 39-76 (268)
193 2fq1_A Isochorismatase; ENTB, 25.0 1.1E+02 0.0038 27.0 5.9 38 253-292 141-178 (287)
194 3txy_A Isochorismatase family 24.5 1.3E+02 0.0044 25.0 5.9 38 253-292 122-159 (199)
195 3tx2_A Probable 6-phosphogluco 23.5 95 0.0032 27.1 5.0 38 240-277 23-60 (251)
196 3led_A 3-oxoacyl-acyl carrier 23.3 79 0.0027 29.6 4.7 30 56-85 121-151 (392)
197 3kl2_A Putative isochorismatas 23.1 1.3E+02 0.0044 25.7 5.7 38 253-292 147-184 (226)
198 3lwd_A 6-phosphogluconolactona 23.1 67 0.0023 27.7 3.8 38 239-276 16-53 (226)
199 3ga2_A Endonuclease V; alpha-b 23.0 3.8E+02 0.013 23.4 11.3 92 5-110 41-143 (246)
200 1nbw_A Glycerol dehydratase re 22.9 1.7E+02 0.0058 29.1 6.9 51 258-308 552-604 (607)
201 1zow_A 3-oxoacyl-[acyl-carrier 22.8 1.3E+02 0.0043 26.6 5.8 28 54-81 53-80 (313)
202 3dwl_A Actin-related protein 3 22.7 36 0.0012 32.4 2.2 24 258-281 328-351 (427)
203 3h1q_A Ethanolamine utilizatio 22.6 2.2E+02 0.0076 24.3 7.3 24 6-30 141-164 (272)
204 3gbc_A Pyrazinamidase/nicotina 21.8 1.6E+02 0.0055 24.1 5.9 38 253-292 121-158 (186)
205 1nbw_A Glycerol dehydratase re 21.8 2.1E+02 0.0073 28.4 7.4 20 57-76 50-69 (607)
206 2ebd_A 3-oxoacyl-[acyl-carrier 21.7 1.2E+02 0.0041 26.7 5.4 29 54-82 52-80 (309)
207 1cza_N Hexokinase type I; stru 21.6 1.6E+02 0.0055 31.0 7.0 70 4-81 526-602 (917)
208 2h84_A Steely1; thiolase-fold, 21.1 93 0.0032 28.5 4.6 38 54-97 267-310 (374)
209 3fhk_A UPF0403 protein YPHP; d 20.8 2E+02 0.0068 23.0 5.7 20 14-34 106-125 (147)
210 1ub7_A 3-oxoacyl-[acyl-carrier 20.7 1E+02 0.0034 27.5 4.7 28 54-81 52-79 (322)
211 2wt9_A Nicotinamidase; hydrola 20.7 1.6E+02 0.0056 25.1 5.9 38 253-292 163-200 (235)
212 3ov2_A Curcumin synthase; type 20.7 1.4E+02 0.0047 27.8 5.8 25 57-81 107-131 (393)
213 3q4g_A NH(3)-dependent NAD(+) 20.4 1.8E+02 0.0062 25.8 6.3 24 243-266 26-51 (279)
214 1hnj_A Beta-ketoacyl-acyl carr 20.4 1.6E+02 0.0055 26.0 6.0 28 54-81 53-80 (317)
215 1g99_A Acetate kinase; alpha/b 20.2 2.7E+02 0.0093 26.3 7.6 30 5-34 2-32 (408)
216 3e1h_A PKSIIINC, putative unch 20.1 95 0.0032 29.9 4.6 26 57-82 115-140 (465)
No 1
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.9e-74 Score=551.06 Aligned_cols=328 Identities=47% Similarity=0.769 Sum_probs=306.0
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
|+.|+|||||||++++|+||++ |+++++..+. +.++.++|++|+.+.++|.+.++++|++||+++|++++|||+|+|+
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~-~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESS-MYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEE-ECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEE-eeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 8899999999999999999999 8899987543 3345778999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEEeCCcEEEEeecccchh
Q 018903 81 RGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAV 160 (349)
Q Consensus 81 ~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~~~g~~~~~~~~~~~S~ 160 (349)
.|||+||++|+|.++||.|+..+++|+++|+||++|++++++.+++++|++|++||++|+++.++++++++++++.++|+
T Consensus 81 ~gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~~~~~~~~~~lg~t~d~S~ 160 (334)
T 3eno_A 81 MGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVIAHVNGRYRVLGETLDIGI 160 (334)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEEEECSSBEEEEEEBSSCCH
T ss_pred cCCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEEEEeCCEEEEeccCCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred hHHHHHHHhHcCCCCCCCch-hHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 018903 161 GNCLDRFARVLTLSNDPSPG-YNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQET 239 (349)
Q Consensus 161 Gr~~Dava~lLGl~~~~~eG-~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~ 239 (349)
||+||++|++||++ ||| ++||+||.++++.+++|...++.+++|+|+++++.+++.+ ..+.+|||++||++
T Consensus 161 G~~fD~vA~~LGl~---y~g~~~le~lA~~g~~~~~~~~~~~~~~~sfsgl~~~v~~~l~~-----g~~~~diAasfq~~ 232 (334)
T 3eno_A 161 GNMIDKFAREAGIP---FPGGPEIEKLAMKGTKLLDLPYSVKGMDTAFSGILTAALQYLKT-----GQAIEDISYSIQET 232 (334)
T ss_dssp HHHHHHHHTTTTCC---SCHHHHHHTTGGGCCSCCCCCCCEETTEECCHHHHHHHHHHHHT-----TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC---CCCHHHHHHHHhcCCCCCCCceeccCceEchHHHHHHHHHHHHc-----CCCHHHHHHHHHHH
Confidence 99999999999998 888 8999999999766666655556789999999999888765 36789999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCCCCCc
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSSTPLE 319 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~~~~~ 319 (349)
+++.++++++++.++++.++||++||||+|++|+++|.+.+...|+++|+||..||||||+||||+++++++.|.+++++
T Consensus 233 l~~~l~~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~~~~~~ 312 (334)
T 3eno_A 233 AFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGVRMSVE 312 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTCCCCGG
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999988887
Q ss_pred ccccccCccCccccccccc
Q 018903 320 ESTFTQRFRTDEVHAVWRE 338 (349)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~ 338 (349)
+.+++|+|++|++..+||.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~ 331 (334)
T 3eno_A 313 ETAVNPRFRIDEVDAPWIT 331 (334)
T ss_dssp GCCCCTTCCGGGSBCCCC-
T ss_pred cCccCCCCChhhccCcccc
Confidence 8899999999999999984
No 2
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=100.00 E-value=3.8e-67 Score=500.64 Aligned_cols=325 Identities=50% Similarity=0.879 Sum_probs=296.0
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
|+|||||||++++++||++ ||++++..+.++ .+.++|+.|..+.++|.+.++++|++||+++|++++|||.|+++.||
T Consensus 1 M~iLgIdts~~~~~val~~-~g~i~~~~~~~~-~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GP 78 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVS-EDKVLANVFDTL-TTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGP 78 (330)
T ss_dssp CCEEEEECSSSEEEEEEEC-SSCEEEEEEEEC-CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEES
T ss_pred CEEEEEEccCCCeEEEEEE-CCEEEEEEEEEe-ecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCC
Confidence 6799999999999999999 889987654433 34556999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEEeCCcEEEEeecccchhhHH
Q 018903 84 GMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNC 163 (349)
Q Consensus 84 g~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~~~g~~~~~~~~~~~S~Gr~ 163 (349)
|+||++|+|..++|.|+..+++|++.|+||+||++++++ +++++|++|++|||+++++..+.++++.++.+.++|+||+
T Consensus 79 G~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~-~~~~~~~~l~v~GG~t~~i~~~~~~~~~lg~t~dds~Gr~ 157 (330)
T 2ivn_A 79 GLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FGVKDPVGLYVSGGNTQVLALEGGRYRVFGETLDIGIGNA 157 (330)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG-GTCCSCEEEEECSSCEEEEEEETTEEEEEEEBSSSCHHHH
T ss_pred CchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh-cCCCCCeEEEEcCCCceEEEEcCCeEEEEEeecCchhHHH
Confidence 999999999999999999999999999999999999999 9998899999999999988878899999999999999999
Q ss_pred HHHHHhHcCCCCCCCch-hHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Q 018903 164 LDRFARVLTLSNDPSPG-YNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFA 242 (349)
Q Consensus 164 ~Dava~lLGl~~~~~eG-~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~ 242 (349)
||++|++||++ +++ ++||+||.++++.+.+|...++++|+|+++++++.+++.+. +.+.+|||++||+++++
T Consensus 158 fD~vA~~LGl~---~~~~~~le~lA~~g~~~~~~p~~i~~~~fsfs~l~~~v~~~~~~g----~~~~~diAa~fq~~l~~ 230 (330)
T 2ivn_A 158 IDVFARELGLG---FPGGPKVEKLAEKGEKYIELPYAVKGMDLSFSGLLTEAIRKYRSG----KYRVEDLAYSFQETAFA 230 (330)
T ss_dssp HHHHHHHHTCC---SCHHHHHHHHHHTCCSCCCCCCCEETTEECCHHHHHHHHHHHHHT----CSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC---CCcHHHHHHHhhcCCCcCCCCcccCCCeEehHHHHHHHHHHHHcC----CCCHHHHHHHHHHHHHH
Confidence 99999999998 555 89999999987644445444557899999999988877652 25789999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCCCCCcccc
Q 018903 243 MLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSSTPLEEST 322 (349)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~~~~~~~~ 322 (349)
.++++++++.++++.++||++||||+|+.||++|.+.+.+.|+++|+||..||||||+||||+++..++.|.+.++++.+
T Consensus 231 ~l~~~~~~~~~~~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~~~~~~~~~~ 310 (330)
T 2ivn_A 231 ALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETI 310 (330)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTTCCCCGGGGS
T ss_pred HHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcCCCCCcccCc
Confidence 99999999999999999999999999999999999999888999999998889999999999999999999888898899
Q ss_pred cccCccCccccccccc
Q 018903 323 FTQRFRTDEVHAVWRE 338 (349)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (349)
++|+|++|||.=.|..
T Consensus 311 ~~p~~~~~~~~~~~~~ 326 (330)
T 2ivn_A 311 VKQKFRTDEVEIVWHH 326 (330)
T ss_dssp CCTTCCGGGSBCTTC-
T ss_pred cCCCCCccceeeeecc
Confidence 9999999999999964
No 3
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=100.00 E-value=6e-66 Score=522.73 Aligned_cols=330 Identities=51% Similarity=0.890 Sum_probs=304.7
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
|+.|+||||||||+++++||+++++++++..+.. .+..++|++|+.+.+.|.+.++++|+++|++ ++++|||+|||+
T Consensus 3 m~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~-~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~ 79 (540)
T 3en9_A 3 MDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIM-YKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFS 79 (540)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTSCEEEEEEEE-CCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEE
T ss_pred cccceEEEEEcCccceEEEEEECCCeEEEEEEEe-ecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEe
Confidence 7789999999999999999999334888876543 3577889999999999999999999999999 899999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEEeCCcEEEEeecccchh
Q 018903 81 RGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAV 160 (349)
Q Consensus 81 ~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~~~g~~~~~~~~~~~S~ 160 (349)
.|||+||++|+|.++||+||..+++|+++|+||+||++++++.+++++|++|++|||+++++..+++++++++.+.++|+
T Consensus 80 ~gPG~~~~l~vg~~~ak~la~~~~~p~~~v~h~~aH~~~~~~~~~~~~p~~l~vsGg~t~~~~~~~~~~~~lg~t~d~s~ 159 (540)
T 3en9_A 80 QGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLTLYVSGGNTQVIAYVSKKYRVFGETLDIAV 159 (540)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHHHHHSSCSSCEEEEECSSCEEEEEEETTEEEEEEEBSSSCH
T ss_pred cCCCchhhHHHHHHHHHHHHHHhCCCeeEeccHHHHHHHHHHhcCCCCCcEEEEcCCCcEEEEEeCCceEEEeeccchHh
Confidence 99999999999999999999999999999999999999999999999999999999999998877899999999999999
Q ss_pred hHHHHHHHhHcCCCCCCCch-hHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 018903 161 GNCLDRFARVLTLSNDPSPG-YNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQET 239 (349)
Q Consensus 161 Gr~~Dava~lLGl~~~~~eG-~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~ 239 (349)
|++||++|++||++ ||| ++||+||.+|+..+++|...++.+|||+|+++++.+.+.+ ..+.+|||++||++
T Consensus 160 G~~~D~~a~~lgl~---~~gg~~ie~lA~~g~~~~~~p~~~~~~~~sfsgl~~~~~~~~~~-----~~~~~~ia~~fq~~ 231 (540)
T 3en9_A 160 GNCLDQFARYVNLP---HPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDA-----GERLEDICYSLQEY 231 (540)
T ss_dssp HHHHHHHHHHTTCC---SSCHHHHHHHHHTCCCCCCCCCCEETTEECCHHHHHHHHHHHHT-----TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC---CCCHHHHHHHHHcCCccCcCCCCCCCcceecHHHHHHHHHHHHc-----CCCHHHHHHHHHHH
Confidence 99999999999998 888 8999999998766777766667889999999999888774 36789999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCCCCCc
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSSTPLE 319 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~~~~~ 319 (349)
+++.+++++++++++++.++||++||||+|+.|+++|.+.+.+.|+++|+||+.+|||||+|||++++..++.|.+.+++
T Consensus 232 ~~~~l~~~~~~a~~~~~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~~~~~~~~g~~s~l~ 311 (540)
T 3en9_A 232 AFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLD 311 (540)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHHHHHHHHTCCCCCGG
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHHHHHHHHcCCCCccc
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999998898
Q ss_pred ccccccCccCcccccccccccc
Q 018903 320 ESTFTQRFRTDEVHAVWREKED 341 (349)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~ 341 (349)
+....|+|+.+++..+|++.+.
T Consensus 312 ~~~v~pr~~~dev~v~w~~~~~ 333 (540)
T 3en9_A 312 ETKIIPNYRTDMVEVNWIKEIK 333 (540)
T ss_dssp GCCCCTTCCSTTSCCCCC----
T ss_pred cccccccccccccccccccccc
Confidence 8899999999999999996543
No 4
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=100.00 E-value=1.1e-51 Score=413.52 Aligned_cols=315 Identities=19% Similarity=0.257 Sum_probs=241.2
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeecc--CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYF--TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~--~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
|+..-.|||++.+||+|+||++ ||+|++++.++|. +||..+.+|. .+|++||+++|++++|||+||
T Consensus 7 ~~~~~~~g~~~~~HDsaAaLv~-DG~ivaA~eEERftR~Kh~~~~fP~-----------~AI~~cL~~AGi~~~DID~Va 74 (576)
T 3ven_A 7 MRVLGLNGWPRDFHDASAALLV-DGRIAAFAEEERLTRKKHGYNTAPV-----------QAAAFCLAQAGLTVDDLDAVA 74 (576)
T ss_dssp CEEEEEECCSSSCCCCEEEEEE-TTEEEEEEEHHHHHCCTTCTTSCCH-----------HHHHHHHHHHTCCGGGCSEEE
T ss_pred hhhhhhccccccCCCceEEEEE-CCEEEEEEEEEEeeeecccCCCCCH-----------HHHHHHHHHcCCCHHHCcEEE
Confidence 4445578899999999999999 9999998876652 3444443454 369999999999999999999
Q ss_pred EecC-CCCCchh-------HHHHHH----HHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCC---eeEEEE
Q 018903 79 YTRG-PGMGAPL-------QVAAVV----VRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGG---NTQVIA 143 (349)
Q Consensus 79 ~~~g-Pg~~t~l-------r~g~~~----ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg---~~~~~~ 143 (349)
++.+ |+....+ +..... ++.|+...+.|++.|+||++||+|+|+.|+|++.++|++||+ +|.+++
T Consensus 75 ~~~~~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v~HHlaHAaSAf~~Spfe~aaVLvvDG~Ge~~T~~v~ 154 (576)
T 3ven_A 75 FGWDLPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFVQHHLAHAASAYYFSGEDRGAVLIVDGQGEEECVTLA 154 (576)
T ss_dssp ESSCHHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEECCHHHHHHHHHHTTSSCSEEEEEEECSCSSSEEEEEE
T ss_pred EECCCccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEecCHHHHHHHHhhhcCCCCceEEEEEeCCCCCceEEEE
Confidence 9999 8743222 221111 334444457899999999999999999999986689999997 465554
Q ss_pred -EeCCcEEEEeec-ccchhhHHHHHHHhHcCCCCCCCch-hHHHHhhhhCCC--CCCCccc-cCCcee------------
Q 018903 144 -YSEGRYRIFGET-IDIAVGNCLDRFARVLTLSNDPSPG-YNIEQLAKKGEK--FLDLPYV-VKGMDV------------ 205 (349)
Q Consensus 144 -~~~g~~~~~~~~-~~~S~Gr~~Dava~lLGl~~~~~eG-~~le~lA~~g~~--~~~~~~~-~~~~~~------------ 205 (349)
.+++++++++.+ .++|+|.+|+++|++|||. ++| +|+|+||+||++ .| ++.. .++..+
T Consensus 155 ~~~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~---~~gE~KVMGLApYG~p~~~~-~~~l~~~dg~f~~~~~~~~~~~~ 230 (576)
T 3ven_A 155 HAEGGKITVLDTVPGAWSLGFFYEHVSEYTGLG---GDNPGKLMGLAAHGTTVDET-LSAFAFDSDGYRLNLIDPQARDP 230 (576)
T ss_dssp EEETTEEEEEEEEEGGGCHHHHHHHHHHHTTSC---TTCHHHHHHHHTTSCCSCTT-TTTEEEETTEEEETTSCTTCCCT
T ss_pred EeeCCEEEEEEEeccCChHHHHHHHHHHHcCCC---CCCccceeEEcCCCCCchhh-hHhhccCCCceeeeccccccccc
Confidence 578899999885 8999999999999999998 445 799999999987 44 3221 122222
Q ss_pred ----echhHHHHHHHHHHH----------------HcC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 018903 206 ----SFSGILSYIEATAAE----------------KLN----NN--ECTPADLCYSLQETLFAMLVEITERAMAHCDKKD 259 (349)
Q Consensus 206 ----~f~~l~~~~~~~~~~----------------~~~----~~--~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~ 259 (349)
+|+++......-++. +.+ ++ .+.+.|||++||+++++.++++++++.+++++++
T Consensus 231 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~R~~~~~~~~~~~~~~~dIAasfQ~~l~~~L~~~~~~a~~~tg~~~ 310 (576)
T 3ven_A 231 EDWDEYSVTERAWFAHLERIYRLPPNEFVRRYDPAKGRVVRDTRRDPYEYRDLAATAQAALERAVFGLADSVLARTGERT 310 (576)
T ss_dssp TSSSSHHHHHHHHHHHHHHHSSSCCCCEEEEEETTTTEEEEEESSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred cccccccccccccccchhcccccchHHHHHHhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 344432111110110 001 11 1347999999999999999999999999999999
Q ss_pred EEEEccchhcHHHHHHHHHHHHhcCC-EEEEcCCCCCChHHHHHHHHHHHHHHcCCC-CC-CcccccccCccCccccccc
Q 018903 260 VLIVGGVGCNERLQEMMRTMCSERGG-RLFATDDRYCVDNGAMIAYTGLLAFAHGSS-TP-LEESTFTQRFRTDEVHAVW 336 (349)
Q Consensus 260 v~lsGGVa~N~~l~~~l~~~l~~~g~-~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 336 (349)
|||+||||+|+.||++|.+.. ++ ++|+|| +|||||+|||+|++..++.|.. .+ +.+.|+||+|+++++.+.+
T Consensus 311 l~LaGGVa~N~~L~~~l~~~~---~~~~v~vpp--~~~D~G~aiGqA~~a~~~~g~~~~~~~~~~ylG~~~~~~~i~~~l 385 (576)
T 3ven_A 311 LFVAGGVGLNATMNGKLLTRS---TVDKMFVPP--VASDIGVSLGAAAAVAVELGDRIAPMGDTAAWGPEFSPDQVRAAL 385 (576)
T ss_dssp EEEESGGGGCHHHHHHHHTST---TCSEEECCT--TCSGGGHHHHHHHHHHHHTTCCCCCCCSCCBCSCCCCHHHHHHHH
T ss_pred EEecchHHHHHHHHHHHHHhc---CCCeEEeCC--CCCchHHHHHHHHHHHHHcCCCCCCCCCCcccCCCCChHHHHHHH
Confidence 999999999999999997643 56 899987 7999999999999999988886 34 4558899999999876543
No 5
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=100.00 E-value=5.1e-35 Score=302.58 Aligned_cols=278 Identities=12% Similarity=0.134 Sum_probs=205.3
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCCC
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGM 85 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~ 85 (349)
||++-. --...+||.+ +++.+-.. |.+. +....-.+.+...++...+-.++ +.+.|+++.||++
T Consensus 402 vla~G~-~lknt~~l~~-~~~~~~s~-------hiGd----l~~~~~~~~~~~~~~~~~~l~~~---~p~~i~~D~HP~y 465 (761)
T 3vth_A 402 ILAVGG-FYKNTFCMTK-GHYAFISH-------HIGD----LDNEKAFNYYIEQIERYKKLFRV---DPEVVAHDMHKGY 465 (761)
T ss_dssp EEECCC-STTBCCEEEE-TTEEEECC-------CCBC----CCSHHHHHHHHHHHHHHHHHTTC---CCSEEEEESCTTS
T ss_pred EEEeCh-hhcceEEEEE-CCEEEEec-------CccC----CCCHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCCCCc
Confidence 555522 3345678888 77765432 2222 22222233333445555554446 4699999999998
Q ss_pred CchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCC-eEEEEeCCe---------eEEEEEeCCcEEEEe--
Q 018903 86 GAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDP-VVLYVSGGN---------TQVIAYSEGRYRIFG-- 153 (349)
Q Consensus 86 ~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p-~~l~i~gg~---------~~~~~~~~g~~~~~~-- 153 (349)
++. .++..++.|++.|+||+||++|+++++++++| ++|.+||.. .+++..+..+++.++
T Consensus 466 ~st---------~~a~~~~~p~~~VQHHhAH~as~mae~~~~~~vlg~a~DGtGyG~dg~iWGGE~l~~~~~~~~r~~~l 536 (761)
T 3vth_A 466 LST---------QYAKSLDLPKIEVQHHHAHIASCMAEHNLDEKVIGIAYDGTGYGTDGNVWGAEILVCDLKSFERIAHL 536 (761)
T ss_dssp HHH---------HHHHHSSSCEEEECHHHHHHHHHHHHTTCCSCEEEEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEE
T ss_pred hHH---------HHHHhcCCCeEEecHHHHHHHHHHHhcCCCCceEEEEEeCCCcCCCCCeeeeEEEEEeCCceEEEecc
Confidence 653 35556689999999999999999999999878 567777621 133332333332221
Q ss_pred ------------------------------------------------------ecccchhhHHHHHHHhHcCCCCC-CC
Q 018903 154 ------------------------------------------------------ETIDIAVGNCLDRFARVLTLSND-PS 178 (349)
Q Consensus 154 ------------------------------------------------------~~~~~S~Gr~~Dava~lLGl~~~-~~ 178 (349)
.+..+|+||+||++|++||++.. +|
T Consensus 537 ~~~~lpGgd~a~~~p~r~a~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~n~p~tSS~GRLFDavAalLGl~~~~~Y 616 (761)
T 3vth_A 537 KYKPLPGNELAIKKIYRTALGFIFDNISFYKNFVEQVDSRELDIILKQIDRKINTAYVSSMGRFFDAVAALIGVRKEVLF 616 (761)
T ss_dssp CCEEEESTTHHHHCHHHHHHHHHGGGGGGGHHHHHHSCHHHHHHHHHHHHHTSSEEEECCHHHHHHHHHHHTTSCSSCSS
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhhCCHHHHHHHHHHHHcCCCCCCCCcchhhHHHHHHHcCCCCCCcc
Confidence 12359999999999999999865 69
Q ss_pred ch-h--HHHHhhhhCCCCCCCccccCCc--eeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018903 179 PG-Y--NIEQLAKKGEKFLDLPYVVKGM--DVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMA 253 (349)
Q Consensus 179 eG-~--~le~lA~~g~~~~~~~~~~~~~--~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~ 253 (349)
|| + +||++|..++..|+++.. ++. .++|+++...+.+.+.. ..+.+|||++||+++++.++++++++.+
T Consensus 617 EGqaA~~LEalA~~~~~~~p~~i~-~~~~~~ld~~~l~~~~~~~l~~-----g~~~~dIAasFq~ala~~L~~~~~~a~~ 690 (761)
T 3vth_A 617 EGQAAMELESLMAESEEYYEYEIL-KEDRYVIDPELILRQIYEDYMK-----GFEKSYISAKFHNTVVNFTYDLANLIRK 690 (761)
T ss_dssp TTHHHHHHHHTCCCCCCCCCCCCE-ESSSEEECHHHHHHHHHHHHHH-----TCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhcCCCCCCceec-CCCcceecHHHHHHHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 3 799999876544555443 232 57888887776665544 3678999999999999999999999999
Q ss_pred HcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCC
Q 018903 254 HCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGS 314 (349)
Q Consensus 254 ~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~ 314 (349)
++++++|+|+||||+|+.|+++|.+.+++.|+++++|+..||||||+|||||.+...+.+.
T Consensus 691 ~~g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~~ 751 (761)
T 3vth_A 691 ETGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILEG 751 (761)
T ss_dssp HHCCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHTS
T ss_pred HhCCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999998776554443
No 6
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=100.00 E-value=1.5e-34 Score=293.85 Aligned_cols=269 Identities=12% Similarity=0.090 Sum_probs=196.9
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCCC
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGM 85 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~ 85 (349)
||++-. --...+||.+ +++.+-.. |.+.. -.....++.+ ..++...+-.++ +.+.|+++.||++
T Consensus 305 vla~G~-~lknt~~l~~-~~~~~~Sq-------hiGdl-~~~~~~~~~~---~~~~~~~~l~~~---~p~~i~~D~HP~y 368 (657)
T 3ttc_A 305 VLCLGA-DLKNTFCLVR-GEQVVLSQ-------HLGDL-SDDGIQTQWR---EALRLMQNIYNF---TPQYVVHDAHPGY 368 (657)
T ss_dssp EEECCC-SSSCCCEEEE-ETEEEECC-------CCCCT-TSTTHHHHHH---HHHHHHHHHTTC---CCSEEEEESCTTC
T ss_pred EEEecc-cccceEEEEE-CCEEEEcc-------CccCC-CCHHHHHHHH---HHHHHHHHHhCC---CCCEEEEcCCCCc
Confidence 566533 3345578888 66654422 22221 1222333333 445555444446 4699999999999
Q ss_pred CchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCC---CCC-eEEEEeCCe---------eEEEEEeCCcEEEE
Q 018903 86 GAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGA---EDP-VVLYVSGGN---------TQVIAYSEGRYRIF 152 (349)
Q Consensus 86 ~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~---~~p-~~l~i~gg~---------~~~~~~~~g~~~~~ 152 (349)
++. .+|+.++.|++.|+||+||+++++.++++ ++| +.|..||.. .+++..+...++++
T Consensus 369 ~st---------~~a~~~~~~~~~vQHHhAH~~a~~ae~~~~~~~~~vlg~~~DG~G~G~Dg~iWGGE~l~~~~~~~~R~ 439 (657)
T 3ttc_A 369 VSC---------QWASEMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 439 (657)
T ss_dssp HHH---------HHHTTSCSCEEEECHHHHHHHHHHHHTTCCTTCCCEEEEEEEEEEECGGGCEEEEEEEEECSSCEEEE
T ss_pred hHH---------HHHHHcCCCeEEeeHHHHHHHHHHHhcCCccCCCCEEEEEEeCCccCCCCCeeeeEEEEEECCccEEE
Confidence 763 35667789999999999999999999998 567 567777621 13333233333333
Q ss_pred e----------------------------------------------------------ecccchhhHHHHHHHhHcCCC
Q 018903 153 G----------------------------------------------------------ETIDIAVGNCLDRFARVLTLS 174 (349)
Q Consensus 153 ~----------------------------------------------------------~~~~~S~Gr~~Dava~lLGl~ 174 (349)
+ .+..||+||+||++|++||++
T Consensus 440 ~hl~~~~lpGGd~a~~~p~R~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~tSS~GRLFDavAalLGl~ 519 (657)
T 3ttc_A 440 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPETASVAAANWSVLARAIERGINAPLASSCGRLFDAVAAALGCA 519 (657)
T ss_dssp EESCCEECTTGGGGGTCTHHHHHHHHHHHCTTGGGSGGGHHHHHSCTHHHHHHHHTTSSCCEEEEHHHHHHHHHHHHTCS
T ss_pred eecccCCCCCHHHHHHHHHHHHHHHHHHhccccccchhhhhcCHHHHHHHHHHHHcCCCCcccCccchHHHHHHHHcCCC
Confidence 2 112599999999999999999
Q ss_pred -CC-CCch-h--HHHHhhhhCCC-CCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018903 175 -ND-PSPG-Y--NIEQLAKKGEK-FLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEIT 248 (349)
Q Consensus 175 -~~-~~eG-~--~le~lA~~g~~-~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~ 248 (349)
.. +||| + +||.+|..+++ .+++|+..++..++|+++. .+++.. ..+.+|||++||+++++.+++++
T Consensus 520 ~~~~~YEGqaA~~LEalA~~~~~~~~~lp~~i~~~~ld~s~l~---~~ll~~-----g~~~~dIAasFh~ala~~L~~~~ 591 (657)
T 3ttc_A 520 PATLSYEGEAACALEALAASCDGVTHPVTMPRVDNQLDLATFW---QQWLNW-----QAPVNQRAWAFHDALAQGFAALM 591 (657)
T ss_dssp CSSCSSTTHHHHHHHHHHHTCCCCCCCCCCCEETTEECHHHHH---HHHHTC-----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccCchhHHHHHHHHhhCCCccCCceeeccCCcccHHHHH---HHHHHc-----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 44 6999 3 69999987753 4665554455578877654 333332 36799999999999999999999
Q ss_pred HHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHH
Q 018903 249 ERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLA 309 (349)
Q Consensus 249 ~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~ 309 (349)
+++.+++++++|+|+||||+|++|+++|.+.+. |+++++|+..||||||+|+||+.+..
T Consensus 592 ~ra~~~~g~~~VvLsGGV~~N~~Lre~L~~~l~--g~~v~~p~~~p~~DnGiaLGQA~~a~ 650 (657)
T 3ttc_A 592 REQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 650 (657)
T ss_dssp HHHHHTTTCCEEEEESGGGGCHHHHHHHHHHTT--TSEEECCCSSCSSGGGHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEECcHHHHHHHHHHHHHHhC--CCEEEecCCCCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999886 89999999999999999999987653
No 7
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=100.00 E-value=3.9e-35 Score=304.85 Aligned_cols=276 Identities=18% Similarity=0.217 Sum_probs=200.7
Q ss_pred ceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHH
Q 018903 15 KIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAV 94 (349)
Q Consensus 15 ~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~ 94 (349)
...+||.+ +++.+-.. |.+. +....-.+.+...++...+-.++ +..+.|+++.||++++ .+
T Consensus 408 knt~~l~~-~~~~~~s~-------hiGd----l~~~~~~~~~~~~~~~~~~l~~~--~p~~~i~~D~HP~y~s-----t~ 468 (772)
T 4g9i_A 408 MNAFGVAK-NGKVYPSQ-------YIGN----TGKVEVLEFMREAIAHFRKILRV--KNLDLIIADLHPAYNT-----TK 468 (772)
T ss_dssp SCCCEEEE-TTEEEECS-------CCCC----SCSHHHHHHHHHHHHHHHTTSCS--SCSSCEEEESCTTCHH-----HH
T ss_pred cceEEEEe-CCEEEEcc-------cccc----CCCHHHHHHHHHHHHHHHHhhCC--CCCCEEEEeCCCCcHH-----HH
Confidence 34578888 77665422 2222 22222223333344444443333 3458899999999976 47
Q ss_pred HHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCe---e-EEE-----EEeCCcEEEEe------------
Q 018903 95 VVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGN---T-QVI-----AYSEGRYRIFG------------ 153 (349)
Q Consensus 95 ~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~---~-~~~-----~~~~g~~~~~~------------ 153 (349)
+||.||..+++|++.|+||+||+++++++++++..++|.+||.. + .++ ..+.++++.++
T Consensus 469 ~Ak~lA~~~~iPli~VqHH~AHaaS~~~esg~~~~l~LalDGsG~G~dgtiWgGE~L~~d~~~~eRlg~l~~l~l~ggDa 548 (772)
T 4g9i_A 469 LAMEMANELDVELLQVQHHYAHIASVMAEKNLDSVIGIALDGVGYGTDGNTWGGEVLYLGYEDVERLAHIDYYPLPGGDL 548 (772)
T ss_dssp HHHHHHTTTTCCCCEECSHHHHTHHHHHHTTCCCCEEEECCSSEEETTTEEEESEEEECCSSSCEECCCBCCEEESSHHH
T ss_pred HHHHHHHhcCCCeeeehHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCeEeeeEEEEecCcceEEeeeeeecCcccchh
Confidence 89999999999999999999999999999999766778887732 1 121 11222222211
Q ss_pred --------------------------------------------------------ecccchhhHHHHHHHhHcCCCCC-
Q 018903 154 --------------------------------------------------------ETIDIAVGNCLDRFARVLTLSND- 176 (349)
Q Consensus 154 --------------------------------------------------------~~~~~S~Gr~~Dava~lLGl~~~- 176 (349)
.+..+|+||+||+++.+||++..
T Consensus 549 A~~~p~r~a~~ll~~~~G~~~i~~~~k~~~~a~~~~~~~~~~e~~~l~~~l~~gin~p~tSS~GRlFDavAallGl~~~~ 628 (772)
T 4g9i_A 549 ASYYPLRALMGILSKVYSIDELEGVINRCCPKAVESLKYGKVEFNVVLNQLAKGINTAYASSTGRVLDAIAVLLNVAYRR 628 (772)
T ss_dssp HHHSTHHHHHHHHTTTSCHHHHHHHHTTSCCGGGTTSSSCSHHHHHTHHHHHTTSSCEEEEEHHHHHHHHHHSSSSCCSC
T ss_pred hhhhHHHHHHHHHhhcCCchHHHHHHHhcChhhccCcccchHHHHHHHHHHhcCCCCccccccchhhHHHHHHcCCcccc
Confidence 01237999999999999999866
Q ss_pred CCch---hHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018903 177 PSPG---YNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMA 253 (349)
Q Consensus 177 ~~eG---~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~ 253 (349)
+||| .+||.+|..+.....++...++..+++..+...+.+.+. .+...|||++||+++++.++++++++.+
T Consensus 629 sYEGqaAm~LE~la~~~~~~~~~~~~~~~~~id~~~l~~~~~~~l~------~~~~~dIAasfQ~al~~~L~~~~~~a~~ 702 (772)
T 4g9i_A 629 HYEGEPAMKLESFAFKGKNDLKFEVPVEGELIRVEELFQSILEAIE------GASPADIAYSAHLALARAFAHTAVERAR 702 (772)
T ss_dssp CSSSCHHHHHHHHHHTCCSCCCCCCCCBTTBBCHHHHHHHHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHhhhhcccccCCCcCccccccchHHHHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6998 378899887654334443334555666655544443332 3678999999999999999999999999
Q ss_pred HcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHH--HHHHcCCC
Q 018903 254 HCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGL--LAFAHGSS 315 (349)
Q Consensus 254 ~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~--~~~~~~~~ 315 (349)
++++++||||||||+|+.||+++.+.+++.|++||+|+.+||||+|+++|||.+ ..++...+
T Consensus 703 ~tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~~~l~ 766 (772)
T 4g9i_A 703 EFGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEGYLT 766 (772)
T ss_dssp TTTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHHTSSC
T ss_pred HhCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999999998754 44444333
No 8
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.96 E-value=5.7e-27 Score=217.36 Aligned_cols=252 Identities=12% Similarity=0.207 Sum_probs=192.0
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
|++||||.++..+.+|+++++++|++....+ +|..|..+. ..++++++++++.+.+++.++++.+|
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~~~~~~------~g~~~e~a~--------~vl~~~~~~a~~~~~~~~~~a~t~~~ 66 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVASETIS------SGTGTTGPS--------RVLEKLYGKTGLAREDIKKVVVTGYG 66 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEES------CCTTSSHHH--------HHHHHHHHHHCCCGGGEEEEEEESTT
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEEEEEec------CCCCHHHHH--------HHHHHHHHHCCCcchhccccccCchH
Confidence 8999999877788999999778888765432 255555442 37899999999999999999999888
Q ss_pred CCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEE-eCCcEE--EEeecccchh
Q 018903 84 GMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAY-SEGRYR--IFGETIDIAV 160 (349)
Q Consensus 84 g~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~-~~g~~~--~~~~~~~~S~ 160 (349)
+. ....|+..|+|..||++++.+..+... .++++.|+++.++.. .+|.++ .++.+++...
T Consensus 67 ~~----------------a~~~~~~~Vne~~aha~a~~~~~~~~~-~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~ 129 (276)
T 4ehu_A 67 RM----------------NYSDADKQISELSCHARGVNFIIPETR-TIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGT 129 (276)
T ss_dssp GG----------------GCCSCSEECCHHHHHHHHHHHHSTTCC-EEEEECSSCEEEEEECTTSCEEEEEEECSCSTTS
T ss_pred HH----------------HhhCCCcccchHHHHHHHHHHhCCCCC-eEEEEcCCCceEEEEEecCceEEEEeCCCcCcch
Confidence 63 345788999999999999988766443 567777877766554 456654 4577899999
Q ss_pred hHHHHHHHhHcCCCCCCCch-hHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 018903 161 GNCLDRFARVLTLSNDPSPG-YNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQET 239 (349)
Q Consensus 161 Gr~~Dava~lLGl~~~~~eG-~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~ 239 (349)
|+|||+++++||++ |++ +. ++..+++.+++ ...+.+|+ ++.+...+.+ ..+.+||++++|++
T Consensus 130 G~f~d~~a~~l~~~---~~~~~~---~~~~a~~~~~i----~~~~~~f~--~s~~~~~~~~-----~~~~~di~a~~~~~ 192 (276)
T 4ehu_A 130 GRFLDVMAKIIEVD---VSELGS---ISMNSQNEVSI----SSTCTVFA--ESEVISHLSE-----NAKIEDIVAGIHTS 192 (276)
T ss_dssp HHHHHHHHHHHTCC---GGGHHH---HHTTCSSCCCC----CCCSHHHH--HHHHHHHHHT-----TCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhccC---hhhhHH---HHhcCCCCCCc----CCccchhh--hhHHHHhhhc-----cccHHHHHHHHHHH
Confidence 99999999999998 765 44 44444332222 34556665 6667666654 47789999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH--HHHHHHc
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT--GLLAFAH 312 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a--~~~~~~~ 312 (349)
+.+.+..++. +....++|+|+|||+.|..+++.+++.+ +.++++|+ .|.++|+ +|+| +++.++.
T Consensus 193 v~~~l~~~~~---~~~~~~~vvl~GGva~n~~lr~~l~~~~---g~~~~~p~--~p~~~~A-~GAAl~A~~~~~~ 258 (276)
T 4ehu_A 193 VAKRVSSLVK---RIGVQRNVVMVGGVARNSGIVRAMAREI---NTEIIVPD--IPQLTGA-LGAALYAFDEAKE 258 (276)
T ss_dssp HHHHHHHHHH---HHCCCSSEEEESGGGGCHHHHHHHHHHH---TSCEECCS--SGGGHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---hcccCCeEEEecCccchHHHHHHHHHHH---CCCeeeCC--CcchHHH-HHHHHHHHHHHhh
Confidence 9999887654 4478899999999999999999999876 67899987 5788875 4554 5555543
No 9
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=99.91 E-value=2.9e-24 Score=191.20 Aligned_cols=146 Identities=21% Similarity=0.328 Sum_probs=118.3
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
+|+||+||||++++++||++ ||++++... .+.++|++.++++|+++|+++|++++|||+|+|+.|
T Consensus 1 ~M~iLaIdTS~~~~svAl~~-~~~~~~~~~--------------~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~G 65 (213)
T 3r6m_A 1 SAKILAIDTATENCSVALLV-NDQVISRSE--------------VAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRG 65 (213)
T ss_dssp -CCEEEEECSSSEEEEEEES-SSCEEEEEE--------------ECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEE
T ss_pred CCEEEEEEccCcceEEEEEE-CCEEEEEEE--------------echHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecC
Confidence 48999999999999999999 899887642 235789999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEE----E-eCCcEEEEeeccc
Q 018903 83 PGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIA----Y-SEGRYRIFGETID 157 (349)
Q Consensus 83 Pg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~----~-~~g~~~~~~~~~~ 157 (349)
||+|||+|+|+++||+|+..+++|+++|+|+++||..++...+. ..++..+|..+.++|. . +++..+.+....-
T Consensus 66 PGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~~~~~~~-~~v~~~~DARr~evY~~~y~~~~~~~~~~~~~~~v 144 (213)
T 3r6m_A 66 PGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGA-TDVAVAIDARMSEVYWARYSRQENGEWIGVDEECV 144 (213)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHCC-SEEEEEECCSTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhhhhcCCC-cEEEEEEECCCCCeeeeEeeccCCCceEeccccee
Confidence 99999999999999999999999999999999999987654332 2367778887765554 2 2455555544443
Q ss_pred chhhHHH
Q 018903 158 IAVGNCL 164 (349)
Q Consensus 158 ~S~Gr~~ 164 (349)
.+.-.+.
T Consensus 145 ~~~~~~~ 151 (213)
T 3r6m_A 145 IPPARLA 151 (213)
T ss_dssp ECHHHHH
T ss_pred CCHHHHH
Confidence 4443333
No 10
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=99.90 E-value=9.5e-24 Score=190.91 Aligned_cols=123 Identities=20% Similarity=0.314 Sum_probs=108.7
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCC
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPG 84 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg 84 (349)
+||+||||++++++||++ ||++++.. ..+.++|++.++++|+++|+++|++++|||+|+|+.|||
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~--------------~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPG 66 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF--------------ELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPG 66 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE--------------EECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSS
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE--------------hhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCC
Confidence 699999999999999999 89887632 244578999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEE
Q 018903 85 MGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIA 143 (349)
Q Consensus 85 ~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~ 143 (349)
+|||+|+|++++|+|+..+++|+++|+||++||++++..++ ..++++++|+.+.++|.
T Consensus 67 sftglRig~~~ak~la~~~~~Pl~~V~~l~a~a~~~~~~~~-~~~v~~~~DArrgevY~ 124 (231)
T 2gel_A 67 SFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTG-ATRVLAAIDARMGEVYW 124 (231)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHHHHHHHHHC-CSEEEEEEEETTTEEEE
T ss_pred hhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHHHHHhhccC-CceEEEEEECCCCcEEE
Confidence 99999999999999999999999999999999999877654 34577777887666654
No 11
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=99.90 E-value=3.8e-23 Score=184.92 Aligned_cols=145 Identities=14% Similarity=0.150 Sum_probs=117.4
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCC
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPG 84 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg 84 (349)
+||+||||+.++++||++ |++++ ... ..+.++|++.|+++|+++|+++|++++|||+|+|+.|||
T Consensus 13 ~iLaidTS~~~~sval~~-~~~~l-~~~-------------~~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPG 77 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRK-GEDLF-EIS-------------YTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPG 77 (218)
T ss_dssp CEEEEEECSSSEEEEEEE-TTEEE-EEE-------------EESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSS
T ss_pred eEEEEEcCCcCeEEEEEE-CCEEE-EEE-------------ecchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCC
Confidence 389999999999999999 88888 322 234678999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEE--Ee-CCcEEEEeecccchhh
Q 018903 85 MGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIA--YS-EGRYRIFGETIDIAVG 161 (349)
Q Consensus 85 ~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~--~~-~g~~~~~~~~~~~S~G 161 (349)
+|||+|+|+++||+|+..+++|+++|+|+++||..+.. ..+++..+|..+.++|. ++ ++....+....-.+.-
T Consensus 78 sfTGlRiG~~~Ak~La~~~~iPl~gVs~l~a~a~~~~~----~~~v~~~iDARr~eVY~a~y~~~~~~~~~~~~~v~~~~ 153 (218)
T 2a6a_A 78 GLTGLRVGIATVVGLVSPYDIPVAPLNSFEMTAKSCPA----DGVVLVARRARKGYHYCAVYLKDKGLNPLKEPSVVSDE 153 (218)
T ss_dssp CHHHHHHHHHHHHHHHGGGTCCEEEECHHHHHHHTCSS----CEEEEEEEECSTTEEEEEEEEESSSCEEEEEEEEEEHH
T ss_pred chHhHHHHHHHHHHHHHHcCCCEEEeCcHHHHHhhccc----CCcEEEEEECCCCcEEEEEEeCCCceEeecccccCCHH
Confidence 99999999999999999999999999999999987542 23467778888766665 33 4544444444445555
Q ss_pred HHHHHHH
Q 018903 162 NCLDRFA 168 (349)
Q Consensus 162 r~~Dava 168 (349)
.+.+.+.
T Consensus 154 ~l~~~l~ 160 (218)
T 2a6a_A 154 ELEEITK 160 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 12
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.83 E-value=6.3e-18 Score=156.29 Aligned_cols=250 Identities=13% Similarity=0.173 Sum_probs=173.7
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
|+ |++||||.++..++++|++++|++++...... .+ .|.. .+..+++++.+ .+++.++|..|++|
T Consensus 1 m~-~~~lGiD~Gst~~k~~l~d~~g~i~~~~~~~~-----~~-~~~~-------~~~~~l~~l~~-~~~~~~~i~~i~~T 65 (270)
T 1hux_A 1 MS-IYTLGIDVGSTASKCIILKDGKEIVAKSLVAV-----GT-GTSG-------PARSISEVLEN-AHMKKEDMAFTLAT 65 (270)
T ss_dssp -C-CEEEEEEECSSEEEEEEEETTTEEEEEEEEEC-----CS-SCCH-------HHHHHHHHHHH-HTCCGGGCSEEEEE
T ss_pred CC-cEEEEEEeccceEEEEEEeCCCCEEEEEEecC-----CC-CHHH-------HHHHHHHHHHH-cCCChhHEEEEEEe
Confidence 64 77899999999999999997899998653221 11 2332 23345555544 36667789999887
Q ss_pred cCCCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEEeCCcEE--EEeecccc
Q 018903 81 RGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYR--IFGETIDI 158 (349)
Q Consensus 81 ~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~~~g~~~--~~~~~~~~ 158 (349)
. -|-. .+.. +..| .++|..||+.++.+..+-. .+++.+.|++++++..++|.+. .++..|..
T Consensus 66 G-~g~~-----------~~~~-~~~~--~v~Ei~ah~~ga~~~~~~~-~~vidiGGqd~k~i~~~~g~v~~~~mn~~ca~ 129 (270)
T 1hux_A 66 G-YGRN-----------SLEG-IADK--QMSELSCHAMGASFIWPNV-HTVIDIGGQDVKVIHVENGTMTNFQMNDKCAA 129 (270)
T ss_dssp S-TTTT-----------TTTT-TCSE--EECHHHHHHHHHHHHCTTC-CEEEEEETTEEEEEEEETTEEEEEEEESSCCT
T ss_pred C-cccc-----------chhh-cCCC--CcccHHHHHHHHHHhCCCC-CEEEEECCCceEEEEEeCCceeeeccccccch
Confidence 3 2210 0111 2334 4899999998887765532 2788999999998888788653 34667888
Q ss_pred hhhHHHHHHHhHcCCCCCCCchhHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Q 018903 159 AVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQE 238 (349)
Q Consensus 159 S~Gr~~Dava~lLGl~~~~~eG~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~ 238 (349)
..|+|+|.+++.||++ + ..++.+|..+..++++ ...+..|. ++.+..+... ..+++||++++++
T Consensus 130 GtG~~le~~a~~lg~~---~--~el~~la~~~~~p~~~----~~~c~vfa--~s~v~~l~~~-----g~~~~di~~av~e 193 (270)
T 1hux_A 130 GTGRFLDVMANILEVK---V--SDLAELGAKSTKRVAI----SSTCTVFA--ESEVISQLSK-----GTDKIDIIAGIHR 193 (270)
T ss_dssp TSHHHHHHHHHHHTCC---T--TTHHHHHTTCCSCCCC----CCCSHHHH--HHHHHHHHHT-----TCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhCCC---H--HHHHHHHhhCCCCCCc----ccccchhH--hHHHHHHhhC-----CCCHHHHHHHHHH
Confidence 8999999999999986 5 3577777655322222 23344564 6777777654 3678999999999
Q ss_pred HHHHHHHHHHHHHHHHcC-CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHH
Q 018903 239 TLFAMLVEITERAMAHCD-KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGL 307 (349)
Q Consensus 239 ~l~~~l~~~~~~~~~~~~-~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~ 307 (349)
.++..+.++++ ..+ .++|+++||++.|..+++.+.+.+ +.+|++|+ ......++|+|.+
T Consensus 194 ~Va~~i~~~~~----~~~~~~~i~~~GG~a~n~~~~~~~~~~l---g~~v~~p~---~~~~~~AlGAAl~ 253 (270)
T 1hux_A 194 SVASRVIGLAN----RVGIVKDVVMTGGVAQNYGVRGALEEGL---GVEIKTSP---LAQYNGALGAALY 253 (270)
T ss_dssp HHHHHHHHHHH----TTCCCSSEEEESGGGGCHHHHHHHHHHH---CSCEECCG---GGGGHHHHHHHHH
T ss_pred HHHHHHHHHHh----cCCCCCeEEEeCccccCHHHHHHHHHHH---CCCeEeCC---CcchHhHHHHHHH
Confidence 99998866653 345 478999999999999999999987 56787765 2333455566544
No 13
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=99.76 E-value=3.1e-16 Score=145.41 Aligned_cols=236 Identities=12% Similarity=0.165 Sum_probs=170.7
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.++.+|||.++..+.+++++ ++++++.. +. +.. ++++++.. +.++++.|++|.+
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~-~~~i~~~~-~~-----------~~~-----------~~~~l~~l--~~~~~~~i~~TG~ 72 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQ-DNQRTFKT-EL-----------TKN-----------IDQVVEWL--NQQQIEKLCLTGG 72 (287)
T ss_dssp --CEEEEEECSSEEEEEEEC-SSCEEEEE-EE-----------GGG-----------HHHHHHHH--HTSCCSEEEEEST
T ss_pred CCeEEEEEEChhhEEEEEEc-CCEEEEEE-ec-----------hHH-----------HHHHHHHh--cccCceEEEEECh
Confidence 46789999999999999998 89998753 21 111 33344332 2457889988843
Q ss_pred CCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCC----CC-eEEEEeCCeeEEEEEeCCcEEEEeeccc
Q 018903 83 PGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAE----DP-VVLYVSGGNTQVIAYSEGRYRIFGETID 157 (349)
Q Consensus 83 Pg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~----~p-~~l~i~gg~~~~~~~~~g~~~~~~~~~~ 157 (349)
| +..++..++.|+..++...||+.++.+..+.. +| +++.+.|+.+ ++.++++++++.+..+.
T Consensus 73 -G-----------~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r~~g~aa 139 (287)
T 2ews_A 73 -N-----------AGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRRVGGIGT 139 (287)
T ss_dssp -T-----------HHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEEEEEESC
T ss_pred -h-----------HHhHhHhhCCCcceeehhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEEcCcccc
Confidence 3 12344567889888999999999998765531 35 6677766666 77777778888887766
Q ss_pred chhhHHHHHHHhHcCCCCCCCchhHHHHhhhhCCC---------CCC---CccccCCceeechhHHHHHHHHHHHHcCCC
Q 018903 158 IAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEK---------FLD---LPYVVKGMDVSFSGILSYIEATAAEKLNNN 225 (349)
Q Consensus 158 ~S~Gr~~Dava~lLGl~~~~~eG~~le~lA~~g~~---------~~~---~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 225 (349)
.. |+|+|.++.+||... + .+|..||..|+. .|+ .+...+..+.+|.. +..++. .
T Consensus 140 Gg-GtFl~l~a~ll~~~~--~--~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk----~~~l~~-----~ 205 (287)
T 2ews_A 140 GG-GMIQGLGYLLSQITD--Y--KQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGH----VLHHLD-----A 205 (287)
T ss_dssp SH-HHHHHHHHHHHCCCC--H--HHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTT----GGGCTT-----S
T ss_pred ch-hhHHHHHHHHhCCCC--H--HHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHH----HHHHHh-----C
Confidence 65 999999999999642 4 466678877653 111 12222334555662 111222 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc-chhcHHHHHHHHHHHHhcCCEEEEcC
Q 018903 226 ECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGG-VGCNERLQEMMRTMCSERGGRLFATD 291 (349)
Q Consensus 226 ~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGG-Va~N~~l~~~l~~~l~~~g~~v~~~~ 291 (349)
..+++|||+++++++.+.+..++....++.++++|+++|| ++.|..+++.+.+.+...+.++++|+
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~ 272 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVE 272 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECC
Confidence 4789999999999999999999998888899999999999 99999999999998776778999987
No 14
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=99.21 E-value=1.9e-09 Score=102.51 Aligned_cols=209 Identities=13% Similarity=0.156 Sum_probs=128.1
Q ss_pred HHHHHHHc---CCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcC-----------
Q 018903 60 VKSALKTA---GITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTG----------- 125 (349)
Q Consensus 60 i~~~L~~~---~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~----------- 125 (349)
+++|++.. ++. .+++.|.+|.| |.+. +...+...+++++..++...||+..+.+..+
T Consensus 84 ~~~~l~~~~~~~~~-~~~~~i~aTGg-Ga~k-------~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t 154 (360)
T 2i7n_A 84 MHRFIQMGSEKNFS-SLHTTLCATGG-GAFK-------FEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYY 154 (360)
T ss_dssp HHHHHHHC-------------CEEST-TTTG-------GGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred HHHHHHHHHHcCCC-ccCcEEEEECC-cHHH-------HHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEE
Confidence 44444443 444 35577777743 3321 1112223456677778999999998876541
Q ss_pred ----------------CC--CCe-EEEEeCCeeEEEEEe-CCcEEEEeecccchhhHHHHHHHhHcCCCCCCCchhHHHH
Q 018903 126 ----------------AE--DPV-VLYVSGGNTQVIAYS-EGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQ 185 (349)
Q Consensus 126 ----------------~~--~p~-~l~i~gg~~~~~~~~-~g~~~~~~~~~~~S~Gr~~Dava~lLGl~~~~~eG~~le~ 185 (349)
++ +|. ++.+ |+.++++.++ ++++++++. +...-|.|+.-++.++|-.. + .+|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~PyllVnI-GsGvSiikv~~~~~f~rvgG-~siGGGTflGL~~lLtg~~~--~--dEl~~ 228 (360)
T 2i7n_A 155 FENPTNPELCQKKPYCLDNPYPMLLVNM-GSGVSILAVYSKDNYKRVTG-TSLGGGTFLGLCCLLTGCET--F--EEALE 228 (360)
T ss_dssp EESTTCTTTCEEEEECCSSCCSEEEEEE-SSSEEEEEEEETTEEEEEEE-ESCSHHHHHHHHHHHHCCCS--H--HHHHH
T ss_pred eccccccccccccccccccCCceEEEEe-CCCcEEEEEcCCCCEEEecc-ccCccHhHHHHHHHHhCCCC--H--HHHHH
Confidence 11 343 3444 4445677764 568887655 46677999998886667542 5 46767
Q ss_pred hhhhCCC-C------------CC-CccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018903 186 LAKKGEK-F------------LD-LPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERA 251 (349)
Q Consensus 186 lA~~g~~-~------------~~-~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~ 251 (349)
||..|++ . |+ +.+..+...-+|....+ ..++ ...+++|||++++.++.+.+..++...
T Consensus 229 lA~~Gd~~~vDllV~DIYg~~y~~~gL~~~~~ASsFGk~~~----~~~~----~~~~~eDIa~gll~sVa~~I~~lA~l~ 300 (360)
T 2i7n_A 229 MAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMS----KEKR----DSISKEDLARATLVTITNNIGSIARMC 300 (360)
T ss_dssp HHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTS----HHHH----TTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCcccceeeecccCcccccCCCccceeehhhhHhh----Hhhh----cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887764 2 11 11222333445653311 1111 147899999999999999999999888
Q ss_pred HHHcCCCeEEEEcc-chhcHHHHHHHHHHHH---hcCCEEEEcC
Q 018903 252 MAHCDKKDVLIVGG-VGCNERLQEMMRTMCS---ERGGRLFATD 291 (349)
Q Consensus 252 ~~~~~~~~v~lsGG-Va~N~~l~~~l~~~l~---~~g~~v~~~~ 291 (349)
.++.++++|+++|| |+.|..+.+.|.+.+. ..+.++++|+
T Consensus 301 A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~ 344 (360)
T 2i7n_A 301 ALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLE 344 (360)
T ss_dssp HHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEET
T ss_pred HHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcC
Confidence 88899999999999 9999999999999874 2346788875
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.49 E-value=3.5e-05 Score=70.03 Aligned_cols=240 Identities=13% Similarity=0.058 Sum_probs=135.6
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeee-ccCCCCCCCcchhhhhhHHhhHH-HHHHHHHHHcCCCCCCCCEEEEe
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHT-YFTPPGQGFLPRETAQHHLEHVL-PLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~-~~~~~~~g~~p~~~~~~h~~~l~-~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
..+++|||.++..+.+++++.+++++...... +..+ .|..-+ ......+. .+++.+.+..+. ++..++++
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l~--~g~i~d---~~~~~~~l~~~~~~~~~~~~~---~~~~~v~t 98 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVVK--DGLVVD---YIGAIQIVRELKAKVERLLGS---ELFQAATA 98 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCCB--TTBCTT---HHHHHHHHHHHHHHHHHHSSS---CCCEEEEE
T ss_pred CCEEEEEEcccceEEEEEECCCCcEEEEEeecccccC--CCEEEc---HHHHHHHHHHHHHHHHHhcCC---ccCeEEEE
Confidence 34689999999999999988667787754321 1001 122100 12222222 234444444454 34555555
Q ss_pred cCCCCCchhHHHHHHHHHHHhhcCCCeEee-ccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEEeCCcEEEEeecccch
Q 018903 81 RGPGMGAPLQVAAVVVRVLSQLWKKPIVAV-NHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIA 159 (349)
Q Consensus 81 ~gPg~~t~lr~g~~~ak~la~~~~~p~~~v-~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~~~g~~~~~~~~~~~S 159 (349)
-|..++.- ...+.+......+.++..+ ..-.|++.+. +....+++++.|+.+++..+.++.+. .....+.+
T Consensus 99 -vp~~~~~~--~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~----~~~~~~viDiGggst~~~~~~~g~~~-~~~~~~~G 170 (272)
T 3h1q_A 99 -IPPGTVGR--NAEACGHVVAGAGLELVTLVDEPVAAARAL----GINDGIVVDIGGGTTGIAVIEKGKIT-ATFDEPTG 170 (272)
T ss_dssp -CCSCC-----CTTHHHHHHHHTTCEEEEEECHHHHHHHHH----TCSSEEEEEECSSCEEEEEEETTEEE-EECCBSCC
T ss_pred -cCCCCCHH--HHHHHHHHHHHcCCeeeecccHHHHHHHHH----cCCCEEEEEECCCcEEEEEEECCEEE-EEecCCCc
Confidence 45544321 1122334455667776554 4555554432 22334788888888887666667654 34456667
Q ss_pred hhHHHHHHHhHcCCCCCCCchhHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 018903 160 VGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQET 239 (349)
Q Consensus 160 ~Gr~~Dava~lLGl~~~~~eG~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~ 239 (349)
.+++-+.++..|++. . ...+.+...- . + ... ..++...
T Consensus 171 g~~~~~~l~~~l~~~---~--~~ae~~k~~~----------~----~----~~~---------------~~~~~~~---- 208 (272)
T 3h1q_A 171 GTHLSLVLAGSYKIP---F--EEAETIKKDF----------S----R----HRE---------------IMRVVRP---- 208 (272)
T ss_dssp HHHHHHHHHHHHTCC---H--HHHHHHHHSS----------T----T----HHH---------------HHHHHHH----
T ss_pred HHHHHHHHHHHhCCC---H--HHHHHHHHhc----------C----C----HHH---------------HHHHHHH----
Confidence 777888888888765 2 2223232110 0 0 011 1122222
Q ss_pred HHHHHHHHHHHHHHHcC-CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHH
Q 018903 240 LFAMLVEITERAMAHCD-KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTG 306 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~-~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~ 306 (349)
+.+.+.+.+.+..++.+ ++.|+|+||.+.+..+.+++.+.+ +.++.+++ -.+-.+++|++.
T Consensus 209 ~~~~i~~~i~~~l~~~~~~~~ivL~GG~a~~~~l~~~l~~~l---~~~v~~~~---~p~~a~a~Gaal 270 (272)
T 3h1q_A 209 VIEKMALIVKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFL---GKEVQVPI---HPLLVTPLGIAL 270 (272)
T ss_dssp HHHHHHHHHHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHH---SSCCBCCS---SGGGHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEECCccchhhHHHHHHHHh---CCCccccC---ChHHHHHHHHHh
Confidence 23344555555556677 889999999999999999999987 46666554 346677778764
No 16
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.24 E-value=0.00059 Score=68.22 Aligned_cols=88 Identities=17% Similarity=0.173 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+...+ |.+|.++. ...+.++|+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~Qi~ADvl---g~pV~~~~----~~E~~alGA 443 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPE----VREVTALGA 443 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEES----CCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHHHHHHHHH---CCEEEeCC----CCchHHHHH
Confidence 568999999999998888888887766655 679999999999999999999887 78998876 234678899
Q ss_pred HHHHHHHcCCCCCCccc
Q 018903 305 TGLLAFAHGSSTPLEES 321 (349)
Q Consensus 305 a~~~~~~~~~~~~~~~~ 321 (349)
|....+..|...++++.
T Consensus 444 A~lA~~a~G~~~~~~e~ 460 (526)
T 3ezw_A 444 AYLAGLAVGFWQNLDEL 460 (526)
T ss_dssp HHHHHHHTTSSSCGGGS
T ss_pred HHHHHHHhCCCCCHHHH
Confidence 88888889988776653
No 17
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.16 E-value=0.00053 Score=63.77 Aligned_cols=107 Identities=12% Similarity=0.124 Sum_probs=71.3
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCC
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPG 84 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg 84 (349)
++||||.+...+.+++++.+|+++...+... ... .....-.+.+...+++++++.+++..++..|+++. ||
T Consensus 7 ~~lgiDiggt~~~~~l~d~~g~il~~~~~~~--~~~------~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~-pG 77 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTDGVVQQKWSIET--NIL------EDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT-PG 77 (326)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEEC--CCT------TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-SS
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEcC--CCC------CCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec-cc
Confidence 7899999999999999998899988654321 100 11123355667789999999888777888888765 55
Q ss_pred CC---ch-------h-HHHH-HHHHHHHhhcCCCeEeeccHHHHHHHh
Q 018903 85 MG---AP-------L-QVAA-VVVRVLSQLWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 85 ~~---t~-------l-r~g~-~~ak~la~~~~~p~~~v~hh~aHa~sa 120 (349)
.. ++ + ..+. .+.+.|...+++|++-.+.-.+.+++-
T Consensus 78 ~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e 125 (326)
T 2qm1_A 78 SVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGE 125 (326)
T ss_dssp EEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred ceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHH
Confidence 32 11 1 0112 345667777889987766665555443
No 18
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.13 E-value=0.0012 Score=65.77 Aligned_cols=87 Identities=10% Similarity=0.021 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAH-CDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~-~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a 305 (349)
....++++++.+.++-.+.+.++.+.+. ..++.|.++||.+.|..+++.+...+ |.+|.+++ ...+.++|+|
T Consensus 370 ~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 442 (508)
T 3ifr_A 370 HTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVL---QRPVQLLA----NPLGSAVGAA 442 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEEE----CCSTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCHHHHHHHHHHh---CCeEEecC----CCCchHHHHH
Confidence 5688999999998888887777766543 23578999999999999999999887 68888876 2336778998
Q ss_pred HHHHHHcCCCCCCcc
Q 018903 306 GLLAFAHGSSTPLEE 320 (349)
Q Consensus 306 ~~~~~~~~~~~~~~~ 320 (349)
....+..|...++++
T Consensus 443 ~lA~~a~G~~~~~~~ 457 (508)
T 3ifr_A 443 WVAAIGGGDDLGWDD 457 (508)
T ss_dssp HHHHHHTCSSCCGGG
T ss_pred HHHHHHhCCCCCHHH
Confidence 888888888766654
No 19
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.10 E-value=0.0067 Score=56.78 Aligned_cols=106 Identities=19% Similarity=0.277 Sum_probs=72.3
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcch--hhhhhHHhhHHHHHHHHHHHcCCCCC-CCCEEEEe
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPR--ETAQHHLEHVLPLVKSALKTAGITPD-EIDCLCYT 80 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~--~~~~~h~~~l~~~i~~~L~~~~i~~~-did~Ia~~ 80 (349)
|++||||.+...+.+++++.+|+++...+... .+. .....-.+.+...+++++++.+++.+ +|..|+++
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~--------~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~ 77 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLS--------TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS 77 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECC--------CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEE
T ss_pred eEEEEEEcCccceEEEEEeCCCCEEEEEeCCC--------CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEe
Confidence 57999999999999999998899987654310 011 11223355677788899988888776 79999887
Q ss_pred cCCCCCchhHHHHHHHHHHHhhcC---CCeEeeccHHHHHHH
Q 018903 81 RGPGMGAPLQVAAVVVRVLSQLWK---KPIVAVNHCVAHIEM 119 (349)
Q Consensus 81 ~gPg~~t~lr~g~~~ak~la~~~~---~p~~~v~hh~aHa~s 119 (349)
. ||.... .....+.+.|...++ .|++-.|--.+.+++
T Consensus 78 ~-pG~vd~-~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 78 L-SGGDQE-DAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp E-TTTTCH-HHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred c-cCCCch-HHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 4 665432 123445566777775 888766665555554
No 20
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=97.93 E-value=0.0099 Score=56.35 Aligned_cols=284 Identities=18% Similarity=0.184 Sum_probs=146.2
Q ss_pred cEEEEEecCC--cceeEEEEEcCC--eEEEeeeeec-------cCCCCC-C-Ccch-h--hhhhHHhhHHHHHHHHHHHc
Q 018903 4 MIALGFEGSA--NKIGVGVVTLDG--SILSNPRHTY-------FTPPGQ-G-FLPR-E--TAQHHLEHVLPLVKSALKTA 67 (349)
Q Consensus 4 m~iLgIdts~--~~~sval~~~dg--~i~~~~~~~~-------~~~~~~-g-~~p~-~--~~~~h~~~l~~~i~~~L~~~ 67 (349)
|+++|+-+++ +-.=+||++.+| +++......- +.+-.. + ..+. . ....-.+....+++.+|++.
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~l~~~ 81 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGVRELLLQQ 81 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCBTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7899998655 444567776555 4554432110 000000 0 0000 0 01111233446789999999
Q ss_pred CCCCCCCCEEEEec-----CCCCCchhHHHHHHHHHHHhhc------------------CCCeEeeccHHHHHHHhhhhc
Q 018903 68 GITPDEIDCLCYTR-----GPGMGAPLQVAAVVVRVLSQLW------------------KKPIVAVNHCVAHIEMGRIVT 124 (349)
Q Consensus 68 ~i~~~did~Ia~~~-----gPg~~t~lr~g~~~ak~la~~~------------------~~p~~~v~hh~aHa~sa~~~s 124 (349)
++++++||+|++-. .|..-..+.+|- ...||... +.|++++-|.. .+.+
T Consensus 82 ~~~~~~Id~IGsHGQTv~H~P~~~~TlQiGd--~~~iA~~Tgi~vV~DFR~~DvAaGGQGAPLvP~~h~~------lf~~ 153 (371)
T 3qbx_A 82 QMSPDEVRAIGSHGQTIRHEPARHFTVQIGN--PALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQA------LFGD 153 (371)
T ss_dssp TCCGGGCCEEEECCEEEEEEGGGTEEEEECC--HHHHHHHHSSCEEECCSHHHHHTTSCCCCCCHHHHHH------HHC-
T ss_pred CCCcccccEEEeCCccCccCCCCCCeeecCC--HHHHHHHHCcCEEeeChHHHHhccCCCCCcchHHHHH------HhCC
Confidence 99999999998532 242111111111 11233333 45555544431 1212
Q ss_pred CCCCCeEEEEeCCeeEEEEEe-CCcEEEEeecccchhhH-HHHHHHh-HcCCCCCCCch-hHHHHhhhhCC---------
Q 018903 125 GAEDPVVLYVSGGNTQVIAYS-EGRYRIFGETIDIAVGN-CLDRFAR-VLTLSNDPSPG-YNIEQLAKKGE--------- 191 (349)
Q Consensus 125 ~~~~p~~l~i~gg~~~~~~~~-~g~~~~~~~~~~~S~Gr-~~Dava~-lLGl~~~~~eG-~~le~lA~~g~--------- 191 (349)
+ .++.+++=-||-..+-... ++.+. -+|...|- +.|...+ ..|.+ |+- . .+|..|+
T Consensus 154 ~-~~~r~~lNIGGIaNiT~l~~~~~v~----afDtGPgN~liD~~~~~~~~~~---yD~dG---~~A~~G~v~~~lL~~l 222 (371)
T 3qbx_A 154 D-DTSRAVLNIGGFSNVSLLSPGKPVR----GFDCGPGNVLMDAWIHHQRGEH---FDRDG---AWAASGQVNHALLASL 222 (371)
T ss_dssp ----CEEEEEESSEEEEEEECTTSCCE----EEEEEESSHHHHHHHHHHHCCS---SCGGG---HHHHTSCCCHHHHHHH
T ss_pred C-CCceEEEecCCceEEEEeCCCCCEE----EEecCccHHHHHHHHHHHhCCC---cccCc---chhcCCCcCHHHHHHH
Confidence 1 2343333335533332222 23321 23444444 5677765 66754 431 1 2333332
Q ss_pred ---CCCCC--ccccCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccc
Q 018903 192 ---KFLDL--PYVVKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGV 266 (349)
Q Consensus 192 ---~~~~~--~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGV 266 (349)
+.|.. |.......|+ ...+.+.+.+. ...+.+|+.+.+-+-.+..|++.+++... ..+.|+++||=
T Consensus 223 l~~pyf~~~pPKStGRE~F~----~~~l~~~l~~~---~~ls~~Dv~ATLt~~TA~sIa~~~~~~~~--~~~~v~vcGGG 293 (371)
T 3qbx_A 223 LADEFFAARGPKSTGRERFN----LPWLQEHLARH---PALPAADIQATLLELSARSISESLLDAQP--DCEEVLVCGGG 293 (371)
T ss_dssp HTSHHHHCCSSCCCCTTTSS----HHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHHHHCT--TCCEEEEESGG
T ss_pred hcCchhcCCCCCccCHHHhC----HHHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHHhccC--CCceEEEECCc
Confidence 22322 2212222232 22232333221 12578899888877777777777655432 35789999999
Q ss_pred hhcHHHHHHHHHHHHhcCCEEEEcCC-CCCChH--HHHHHHHHHHHHHcCCCCCC
Q 018903 267 GCNERLQEMMRTMCSERGGRLFATDD-RYCVDN--GAMIAYTGLLAFAHGSSTPL 318 (349)
Q Consensus 267 a~N~~l~~~l~~~l~~~g~~v~~~~~-~~~~D~--G~~iG~a~~~~~~~~~~~~~ 318 (349)
+.|..|.++|++.+. +.+|..... -...|. ++++||.+++.+. |....+
T Consensus 294 a~N~~Lm~~L~~~l~--~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l~-g~p~~l 345 (371)
T 3qbx_A 294 AFNTALMKRLAMLMP--EARVASTDEYGIPPAWMEGMAFAWLAHRFLE-RLPGNC 345 (371)
T ss_dssp GGCHHHHHHHHHHCT--TSEEEEGGGGTCCTTTHHHHHHHHHHHHHHT-TCCCSC
T ss_pred cCcHHHHHHHHHhCC--CCEEeCHHHcCCChhHHHHHHHHHHHHHHHc-CCCCCC
Confidence 999999999999874 467776653 234565 8999999998775 544334
No 21
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=97.92 E-value=0.0092 Score=59.19 Aligned_cols=87 Identities=11% Similarity=0.134 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHC-DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~-~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a 305 (349)
....++++++.+.++-.+.+.++.+.+.. .++.|.++||.+.|..+++.+...+ |.+|.++. ...+.++|+|
T Consensus 363 ~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 435 (504)
T 3ll3_A 363 HQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF---NVPIVTMK----EQQSGTLAAM 435 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH---TSCEEEES----CSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh---CCeEEecC----CCCchhHHHH
Confidence 56889999999998888888777664432 3679999999999999999999887 68888875 2347788998
Q ss_pred HHHHHHcCCCCCCcc
Q 018903 306 GLLAFAHGSSTPLEE 320 (349)
Q Consensus 306 ~~~~~~~~~~~~~~~ 320 (349)
....+..|...++++
T Consensus 436 ~lA~~a~G~~~~~~~ 450 (504)
T 3ll3_A 436 FLARQALGLNQDLSE 450 (504)
T ss_dssp HHHHHHTTSCCSGGG
T ss_pred HHHHHHcCccCCHHH
Confidence 888888888766654
No 22
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.90 E-value=0.0068 Score=55.36 Aligned_cols=252 Identities=15% Similarity=0.106 Sum_probs=125.9
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.|++||||.+...+.+++++.+|+++...+... | .-.+.+...+.+++++ .++..|+++.
T Consensus 3 ~m~~lgidiggt~i~~~l~d~~g~il~~~~~~~---------~-----~~~~~~~~~i~~~i~~-----~~i~gigi~~- 62 (292)
T 2gup_A 3 AMTIATIDIGGTGIKFASLTPDGKILDKTSIST---------P-----ENLEDLLAWLDQRLSE-----QDYSGIAMSV- 62 (292)
T ss_dssp -CCEEEEEEETTEEEEEEECTTCCEEEEEEECC---------C-----SSHHHHHHHHHHHHTT-----SCCSEEEEEE-
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEEEEEEeC---------C-----CCHHHHHHHHHHHHHh-----CCCcEEEEEe-
Confidence 477999999999999999998899987654310 1 1123445556666654 4788888765
Q ss_pred CCCC---ch-------h--HHHHHHHHHHHhhcCCCeEeeccHHHHHHHhhhhcCCC-CCe-EEEEeCCe-eEEEEEeCC
Q 018903 83 PGMG---AP-------L--QVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAE-DPV-VLYVSGGN-TQVIAYSEG 147 (349)
Q Consensus 83 Pg~~---t~-------l--r~g~~~ak~la~~~~~p~~~v~hh~aHa~sa~~~s~~~-~p~-~l~i~gg~-~~~~~~~~g 147 (349)
||.. ++ + ..+..+.+.| ..+++|++-.+.-.+.+++-+. .+-. ... .|.++-|- ..++ -+|
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~-~~~~~~~~v~l~~GtGiG~giv--~~G 138 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL-AHPELENAACVVIGTGIGGAMI--ING 138 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH-HCTTCSSEEEEEESSSEEEEEE--ETT
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH-hcCCCCeEEEEEECCceEEEEE--ECC
Confidence 4421 11 1 1123456677 7889998776666665554433 2211 223 33332221 2222 234
Q ss_pred cEEEEee-cccchhhHHH-HHHHhHcCCCC-CCCc----hhHHHHhhhhCCCCCCCccccCCceeechhHHHHHHHHHHH
Q 018903 148 RYRIFGE-TIDIAVGNCL-DRFARVLTLSN-DPSP----GYNIEQLAKKGEKFLDLPYVVKGMDVSFSGILSYIEATAAE 220 (349)
Q Consensus 148 ~~~~~~~-~~~~S~Gr~~-Dava~lLGl~~-~~~e----G~~le~lA~~g~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~ 220 (349)
++.. +. -...-+|.+. +. +-+. ...| +..|...+..... . ..++ ...+.+...+
T Consensus 139 ~l~~-G~~g~aGEiGh~~~~~-----~~~~~gcle~~~s~~~l~~~~~~~~~---~------~~~~----~~~v~~~a~~ 199 (292)
T 2gup_A 139 RLHR-GRHGLGGEFGYMTTLA-----PAEKLNNWSQLASTGNMVRYVIEKSG---H------TDWD----GRKIYQEAAA 199 (292)
T ss_dssp EEEC-CTTSCTTCGGGCBSSC-----CSSSCCBHHHHHSHHHHHHHHHHHHS---S------CCCC----HHHHHHHHHT
T ss_pred EEEe-cCCCCCccceeEEecc-----CCCCCCcHHHhcCHHHHHHHHHHhhC---C------CCCC----HHHHHHHHHc
Confidence 3211 10 0000111110 00 0000 0011 0112111110000 0 0111 1122222222
Q ss_pred HcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcC---------CEEEEcC
Q 018903 221 KLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERG---------GRLFATD 291 (349)
Q Consensus 221 ~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g---------~~v~~~~ 291 (349)
....|..+-+...+.+...+..+....+.+.|+++||++.+..+.+.+++.+.+.. .++....
T Consensus 200 --------gd~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~ 271 (292)
T 2gup_A 200 --------GNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACT 271 (292)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECS
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcc
Confidence 12344444555555666666666666788999999999888888888877765421 2333333
Q ss_pred CCCCChHHHHHHHHHHH
Q 018903 292 DRYCVDNGAMIAYTGLL 308 (349)
Q Consensus 292 ~~~~~D~G~~iG~a~~~ 308 (349)
.++.+.++|++.+.
T Consensus 272 ---~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 272 ---YHADANLYGALVNW 285 (292)
T ss_dssp ---CSTTHHHHHHHHHH
T ss_pred ---cCChhhHHHHHHHH
Confidence 45666778887654
No 23
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.87 E-value=0.0052 Score=56.53 Aligned_cols=76 Identities=8% Similarity=0.067 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCC---EEEEcCCCCCChHHHHHHHHHHHH
Q 018903 233 CYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGG---RLFATDDRYCVDNGAMIAYTGLLA 309 (349)
Q Consensus 233 A~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~---~v~~~~~~~~~D~G~~iG~a~~~~ 309 (349)
|..+-+...+.+...+..+....+.+.|+|.||++.+..+...+++.+..... ++.... .++.+.++|++.+..
T Consensus 214 a~~~~~~~~~~La~~i~~l~~~~~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~---lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 214 SERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETAT---HKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECS---CTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECC---cCChHHHHhHHHHHH
Confidence 33334444445555555555667889999999999888888999988875543 233332 566777888876654
Q ss_pred HH
Q 018903 310 FA 311 (349)
Q Consensus 310 ~~ 311 (349)
-+
T Consensus 291 ~~ 292 (297)
T 4htl_A 291 QE 292 (297)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 24
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=97.76 E-value=0.01 Score=56.26 Aligned_cols=285 Identities=16% Similarity=0.183 Sum_probs=150.8
Q ss_pred CCCcEEEEEecCC--cceeEEEEEcCCe---EEEeeeee-------ccCCCCCCCcchhh-----hhhHHhhHHHHHHHH
Q 018903 1 MKRMIALGFEGSA--NKIGVGVVTLDGS---ILSNPRHT-------YFTPPGQGFLPRET-----AQHHLEHVLPLVKSA 63 (349)
Q Consensus 1 m~~m~iLgIdts~--~~~sval~~~dg~---i~~~~~~~-------~~~~~~~g~~p~~~-----~~~h~~~l~~~i~~~ 63 (349)
|++|+++|+-+++ +-.=+||++.+|+ ++...... ++.+-..+-..... ...-......+++.+
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~ 81 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899998644 5556788876654 44433111 00000000000000 011122244678999
Q ss_pred HHHcCCCCCCCCEEEEec-----CCC---CCchhHHHHHHHHHHHhhc------------------CCCeEeeccHHHHH
Q 018903 64 LKTAGITPDEIDCLCYTR-----GPG---MGAPLQVAAVVVRVLSQLW------------------KKPIVAVNHCVAHI 117 (349)
Q Consensus 64 L~~~~i~~~did~Ia~~~-----gPg---~~t~lr~g~~~ak~la~~~------------------~~p~~~v~hh~aHa 117 (349)
+++.++++++||+|++-. .|. .|| +.+|- ...||..+ +.|++++-|..
T Consensus 82 l~~~~~~~~~i~~IGsHGQTv~H~P~~~~~~T-lQiGd--~~~iA~~tgi~vV~DFR~~DvAaGGQGAPLvP~fh~~--- 155 (370)
T 3cqy_A 82 LAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFT-LQIGD--PNTIATETGIDVIADFRRKDIALGGQGAPLVPAFHQQ--- 155 (370)
T ss_dssp HHHHCCCGGGEEEEEEEEEEEEEETTSSSCEE-EEESC--HHHHHHHHSSCEEECCHHHHHHTTSCCCCCHHHHHHH---
T ss_pred HHHcCCCcccccEEEeCCcccccCCCCCCCce-EecCC--HHHHHHHHCcCEEeeChhhHhhCCCCCCCchHHHHHH---
Confidence 999999999999998543 262 132 22221 11233333 45665544432
Q ss_pred HHhhhhcCCCCCeEEEEeCCeeEEEEEe-C-CcEEEEeecccchhhH-HHHHHHhH-cCCCCCCCc--hhHHHHhhhhC-
Q 018903 118 EMGRIVTGAEDPVVLYVSGGNTQVIAYS-E-GRYRIFGETIDIAVGN-CLDRFARV-LTLSNDPSP--GYNIEQLAKKG- 190 (349)
Q Consensus 118 ~sa~~~s~~~~p~~l~i~gg~~~~~~~~-~-g~~~~~~~~~~~S~Gr-~~Dava~l-LGl~~~~~e--G~~le~lA~~g- 190 (349)
.+.++ .++.+++=-||-..+-... + +.+. -+|...|- +.|...+. .|.+ |+ | .+|..|
T Consensus 156 ---lf~~~-~~~r~~lNIGGIaNiT~l~~~~~~v~----~fDtGPgN~LiD~~~~~~~~~~---yD~~G----~~A~~G~ 220 (370)
T 3cqy_A 156 ---TFAQV-GKKRVILNIGGIANITYLPGNSEEVL----GFDTGPGNTLIDAWVQQVKNES---YDKNG----AWAASGK 220 (370)
T ss_dssp ---HHCCT-TCCEEEEEESSEEEEEEECSSSSCCE----EEEEEESSHHHHHHHHHHHCCS---SCGGG----HHHHHSC
T ss_pred ---HhCCC-CCCeEEEEccceEEEEEEcCCCCCeE----EEeCCchhHHHHHHHHHHHCcC---CCCCC----HhhcCCC
Confidence 12222 1233333335433322222 2 3321 23444443 56776655 5754 43 2 123333
Q ss_pred -----------CCCCCCccc--cCCceeechhHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 018903 191 -----------EKFLDLPYV--VKGMDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDK 257 (349)
Q Consensus 191 -----------~~~~~~~~~--~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~ 257 (349)
++.|..+.+ ..... |. ...+.+.+... ...+.+|+.+.+-+-.+..|++.+++. .+.
T Consensus 221 v~~~lL~~ll~~pyf~~~pPKStGRE~--F~--~~~l~~~l~~~---~~l~~~Dv~ATLt~~TA~sIa~~~~~~---~~~ 290 (370)
T 3cqy_A 221 TDPQLLAQLLSHPYFSLAYPKSTGREL--FN--QAWLEQQLSAF---NQLNEEDIQSTLLDLTCHSIAQDILKL---AQE 290 (370)
T ss_dssp CCHHHHHHHHTCGGGGSCSSCCCCSSS--SS--HHHHHHHTTTC---TTSCHHHHHHHHHHHHHHHHHHHHHHH---CSS
T ss_pred ccHHHHHHHhcCccccCCCCCccChhh--cC--HHHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHHhc---CCC
Confidence 233433321 22222 33 22222333221 123578998888887787777777655 145
Q ss_pred CeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC-CCCChH--HHHHHHHHHHHHHcCCCCCCc
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD-RYCVDN--GAMIAYTGLLAFAHGSSTPLE 319 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~-~~~~D~--G~~iG~a~~~~~~~~~~~~~~ 319 (349)
+.|.++||=+.|..|.++|++.+. +.+|..... -..+|. ++++||.+++.+. |....+.
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l~--~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~l~-g~p~nlp 352 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALLP--GYRIDTTSALGVDPKWAEGIAFAWLAMRYQL-GLPANLP 352 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHCT--TEEEEEGGGGTCCTTTHHHHHHHHHHHHHHT-TCCCCCH
T ss_pred CEEEEECCCcCCHHHHHHHHHhCC--CCeeeeHHHhCCChhHHHHHHHHHHHHHHHc-CCCCCCC
Confidence 689999999999999999999873 346654432 234565 8999999998775 5554443
No 25
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.69 E-value=0.0073 Score=56.36 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=62.1
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.|++||||.+...+.+++++.+|+++...+... |......-.+.+...+++++++.+ .+..|+++.
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~- 88 (327)
T 4db3_A 23 NAMYYGFDVGGTKIEFGAFNEKLERVATERVPT---------PTDDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL- 88 (327)
T ss_dssp SCCEEEEEECSSEEEEEEECTTCCEEEEEEEEC---------CTTCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE-
T ss_pred CcEEEEEEECCCEEEEEEEeCCCcEEEEEEecC---------CCCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe-
Confidence 346899999999999999998899988654321 111112233445556666666544 366776654
Q ss_pred CCCC---ch--------hHHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 83 PGMG---AP--------LQVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 83 Pg~~---t~--------lr~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
||.. ++ ...+..+.+.|...+++|++-.|--.+-|++
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalg 136 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALS 136 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHH
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHH
Confidence 3321 11 1112334566777888998766655554444
No 26
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.63 E-value=0.013 Score=55.88 Aligned_cols=99 Identities=13% Similarity=0.212 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEccchhcHH-HHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHC--DKKDVLIVGGVGCNER-LQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLL 308 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~--~~~~v~lsGGVa~N~~-l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~ 308 (349)
.|..+-+.+.+.+...+..+.... +.+.|+|+||++.|.. +.+.+.+.+.... ++.+-+. .-++.+.++|++.+.
T Consensus 269 ~a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~-~~~i~~~-~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 269 WAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIA-PVLVFPG-SNEEKALALSALRVL 346 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTS-CEEEEEB-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhc-CeEEEec-CcchhHHHHHHHHHH
Confidence 344444555555555555555667 7899999999998866 8899998886543 3433322 135556777877642
Q ss_pred HHHcCCCCCCcccccccCccCccccccccccccchh
Q 018903 309 AFAHGSSTPLEESTFTQRFRTDEVHAVWREKEDSAC 344 (349)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (349)
.+...+. +|+.+ ..+||++-||.-
T Consensus 347 ---~~~~~~~-------~~~~~--~~~~~~~~~~~~ 370 (381)
T 1saz_A 347 ---RGEEKPK-------NYSEE--SRRWRERYDSYL 370 (381)
T ss_dssp ---TTSSCCE-------EHHHH--HHHHHHHHHHHT
T ss_pred ---cCCcccc-------cchhH--hHHHHHHHHhhh
Confidence 2222222 24333 378998888753
No 27
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.62 E-value=0.0027 Score=60.62 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=69.9
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
.++||||.+.+.+.+++++.+|+++...+... .. ......-.+.+...+++++++.+++..++..|+++. |
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~--~~------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-p 157 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPL--PS------QSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAA-P 157 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEC--CS------SCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE-S
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEcc--CC------CCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEe-e
Confidence 47899999999999999998899988654321 00 001223355666788888888777677899998764 4
Q ss_pred CCC---ch-------h-HHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 84 GMG---AP-------L-QVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 84 g~~---t~-------l-r~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
|.. ++ + ..+..+...|...+++|++-.|--.+-|++
T Consensus 158 G~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaala 204 (380)
T 2hoe_A 158 GPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVG 204 (380)
T ss_dssp SCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHH
T ss_pred ccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHH
Confidence 431 11 1 011234556777788998766665555444
No 28
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.61 E-value=0.039 Score=50.37 Aligned_cols=71 Identities=8% Similarity=0.073 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLL 308 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~ 308 (349)
.|..+-+...+.+...+..+....+...|+++||++.+..+.+.+++.+.+. ++..+ . ++....+|++.+.
T Consensus 215 ~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgGgv~~~~~~~~~l~~~~~~~--~i~~~---~-~~~~~~~GAa~la 285 (299)
T 2e2o_A 215 VAMDILKQGAELLASQAVYLARKIGTNKVYLKGGMFRSNIYHKFFTLYLEKE--GIISD---L-GKRSPEIGAVILA 285 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGSHHHHHHHHHHHHHT--TCEEE---C-CSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCccCcHHHHHHHHHHCCCC--eEecc---C-CCCChHHHHHHHH
Confidence 4444455555556666666666678889999999998888888888887754 33332 2 4445566776543
No 29
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.53 E-value=0.0098 Score=57.64 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=71.5
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
..++||||.+...+.+++++.+|+++...+... |......-.+.+...+++++++.+++..+|..|+++.
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~- 176 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDI---------HEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITL- 176 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEEC---------CCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEE-
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcC---------CCCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEec-
Confidence 357899999999999999998899988654321 1111223455677788999998888777888887764
Q ss_pred CCCC---ch-------h-HHHHHHHHHHHhhcCCCeEeeccHHHHHHHh
Q 018903 83 PGMG---AP-------L-QVAAVVVRVLSQLWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 83 Pg~~---t~-------l-r~g~~~ak~la~~~~~p~~~v~hh~aHa~sa 120 (349)
||.. ++ + ..+..+++.|...+++|++-.|--.+-|++-
T Consensus 177 pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE 225 (429)
T 1z05_A 177 PGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAE 225 (429)
T ss_dssp SSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred cCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHH
Confidence 4421 11 0 0112345567777889987767665555543
No 30
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.52 E-value=0.02 Score=52.79 Aligned_cols=74 Identities=12% Similarity=-0.058 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccch-hc-HHHHHHHHHHHHhcCC-----EEEEcCCCCCChHHHHHHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVG-CN-ERLQEMMRTMCSERGG-----RLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa-~N-~~l~~~l~~~l~~~g~-----~v~~~~~~~~~D~G~~iG~ 304 (349)
.|..+-+...+.+...+..+....+.+.|++.||++ .+ ..+.+.+++.+.+... ++... ..++.+.++|+
T Consensus 213 ~a~~~~~~~~~~l~~~i~~l~~~~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s---~lg~~a~~~GA 289 (302)
T 3vov_A 213 KAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRA---RLGAEAGLLGA 289 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEEC---SSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEc---CCCCcHHHHHH
Confidence 344444455555566666666667889999999998 54 6788888888876432 22222 25777888888
Q ss_pred HHHH
Q 018903 305 TGLL 308 (349)
Q Consensus 305 a~~~ 308 (349)
+.+.
T Consensus 290 a~l~ 293 (302)
T 3vov_A 290 ALTA 293 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 31
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.51 E-value=0.0038 Score=56.95 Aligned_cols=73 Identities=18% Similarity=0.182 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcC----CEEEEcCCCCCChHHHHHHHHHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERG----GRLFATDDRYCVDNGAMIAYTGL 307 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g----~~v~~~~~~~~~D~G~~iG~a~~ 307 (349)
.|..+-+...+.+...+..+....+.+.|+++||++.+..+.+.+++.+.+.. .++.... .++.+.++|++.+
T Consensus 209 ~a~~i~~~~~~~L~~~i~~l~~~l~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~---~~~~a~~~GAa~l 285 (289)
T 2aa4_A 209 QAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAH---YRHDAGLLGAALL 285 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECS---CSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECC---CCCchHHHHHHHH
Confidence 34444445555556666666666788899999999988888899988886542 2333332 4566677888765
No 32
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.50 E-value=0.029 Score=52.03 Aligned_cols=264 Identities=15% Similarity=0.162 Sum_probs=129.8
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcch-hhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPR-ETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~-~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
-++||||-+...+.+++++.+|+++...+... |. .....-.+.+...++++++ +..++..|+++.
T Consensus 19 ~~~lgidiggt~i~~~l~d~~g~il~~~~~~~---------~~~~~~~~~~~~i~~~i~~~~~----~~~~i~gigi~~- 84 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTPEGEIQNATRFMT---------ADWVNGIGFVESMKLEIGNFLK----QYPIVKGVGIGW- 84 (321)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEEH---------HHHHTTTCHHHHHHHHHHHHHH----HCTTCCEEEEEE-
T ss_pred cEEEEEEECCCEEEEEEEcCCCcEEEEEEEeC---------CCCCCHHHHHHHHHHHHHHHHh----ccCCeeEEEEEe-
Confidence 36899999999999999998899988654321 10 0111223344556666665 245788888765
Q ss_pred CCCC---ch-------h--HHHHHHHHHHHhhc-CCCeEeeccHHHHHHHhhhh-cCCC-CCeEEEEeCCe--eEEEEEe
Q 018903 83 PGMG---AP-------L--QVAAVVVRVLSQLW-KKPIVAVNHCVAHIEMGRIV-TGAE-DPVVLYVSGGN--TQVIAYS 145 (349)
Q Consensus 83 Pg~~---t~-------l--r~g~~~ak~la~~~-~~p~~~v~hh~aHa~sa~~~-s~~~-~p~~l~i~gg~--~~~~~~~ 145 (349)
||.. ++ + ..+..+.+.|...+ ++|++-.|--.+-|++-+.. ..-. ...+++.-|.. ..++ .
T Consensus 85 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~gii--~ 162 (321)
T 3r8e_A 85 PGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGVGSGVM--M 162 (321)
T ss_dssp SSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEE--E
T ss_pred cccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEE--E
Confidence 4421 11 1 01233556677888 89987666555544443221 1111 12333333322 2222 2
Q ss_pred CCcEEEEee-cccchhhHHHHHHHhHcCCCCCCCch----hHHHHhhhh----CCCCCCCccccCCceeechhHHHHHHH
Q 018903 146 EGRYRIFGE-TIDIAVGNCLDRFARVLTLSNDPSPG----YNIEQLAKK----GEKFLDLPYVVKGMDVSFSGILSYIEA 216 (349)
Q Consensus 146 ~g~~~~~~~-~~~~S~Gr~~Dava~lLGl~~~~~eG----~~le~lA~~----g~~~~~~~~~~~~~~~~f~~l~~~~~~ 216 (349)
+|++-. +. -...-+|.+.+ -. -| | .|. ..|...+.. ..+. .+... .....+. ..+.+
T Consensus 163 ~G~l~~-G~~g~aGEiGh~~~-~~--~g-c---lE~~~S~~al~~~~~~~~~~~~~~-~~~~~-~~~~~~~----~~i~~ 228 (321)
T 3r8e_A 163 NGKLFI-GGRGNGTEVGHMLT-TR--GK-S---LENQVGINHLIAYTHEQLALDVAK-KSSLH-TIAELSP----KVIAD 228 (321)
T ss_dssp TTEECC-CTTSCCCCGGGCBC-TT--SS-B---SHHHHSHHHHHHHHHHHHHHCTTC-CCSGG-GCSSCCH----HHHHH
T ss_pred CCEEec-CCCCCCcccccccC-CC--CC-c---HHHhcCHHHHHHHHHHHhhccCcc-ccccc-ccccCCH----HHHHH
Confidence 333210 00 00111222110 00 11 1 221 222222211 1110 00000 0111121 22333
Q ss_pred HHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhc-HHHHHHHHHHHHhcC-------CEEE
Q 018903 217 TAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCN-ERLQEMMRTMCSERG-------GRLF 288 (349)
Q Consensus 217 ~~~~~~~~~~~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N-~~l~~~l~~~l~~~g-------~~v~ 288 (349)
...+ ....|..+-+...+.+...+..+....+.+.|+|.||++.+ ..+.+.+++.+.+.- .++.
T Consensus 229 ~a~~--------gD~~a~~~~~~~~~~La~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~ 300 (321)
T 3r8e_A 229 HAAQ--------GDALALAVWADIGTIIGESLVNIVRVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIG 300 (321)
T ss_dssp HHHT--------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEE
T ss_pred HHHc--------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEE
Confidence 3332 12234444444555555555555566788999999999876 677788877776543 2444
Q ss_pred EcCCCCCChHHHHHHHHHHH
Q 018903 289 ATDDRYCVDNGAMIAYTGLL 308 (349)
Q Consensus 289 ~~~~~~~~D~G~~iG~a~~~ 308 (349)
... .++.+.++|++.+.
T Consensus 301 ~s~---l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 301 KAT---LENDAGLLGAAGLI 317 (321)
T ss_dssp ECS---SGGGHHHHHHHHHH
T ss_pred EcC---CCCcHHHHHHHHHH
Confidence 433 57778888987753
No 33
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.47 E-value=0.0082 Score=55.80 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhc-HHHHHHHHHHHHhcCC--------EEEEcCCCCCChHHHHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCN-ERLQEMMRTMCSERGG--------RLFATDDRYCVDNGAMI 302 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N-~~l~~~l~~~l~~~g~--------~v~~~~~~~~~D~G~~i 302 (349)
.|..+-+...+.+...+..+....+.+.|+|+||++.+ ..+.+.+++.+.+... ++.... .+|.+.++
T Consensus 228 ~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~---l~~~a~l~ 304 (321)
T 3vgl_A 228 VAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQ---LGGKAGLV 304 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECT---TGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECC---CCCcHHHH
Confidence 34444444555555555556566788999999999876 6667778777764332 333332 47788888
Q ss_pred HHHHH
Q 018903 303 AYTGL 307 (349)
Q Consensus 303 G~a~~ 307 (349)
|++.+
T Consensus 305 GAa~l 309 (321)
T 3vgl_A 305 GAADL 309 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 34
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.46 E-value=0.042 Score=51.35 Aligned_cols=106 Identities=17% Similarity=0.143 Sum_probs=65.5
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
+++||||.+...+.+++++.+|+++...+... |. ....-.+.+...+++++++.+....++..|+++. |
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~---------~~-~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~-p 98 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFN---------PK-TYEERINLILQMCVEAAAEAVKLNCRILGVGIST-G 98 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEC---------CS-SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE-S
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEEEEEcC---------CC-CHHHHHHHHHHHHHHHHHhcccccCceEEEEEec-c
Confidence 57899999999999999998899988654321 11 1122345566777888776655455677777653 3
Q ss_pred CCC---ch-------h---HHHHHHHHHHHhhcCCCeEeeccHHHHHHHh
Q 018903 84 GMG---AP-------L---QVAAVVVRVLSQLWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 84 g~~---t~-------l---r~g~~~ak~la~~~~~p~~~v~hh~aHa~sa 120 (349)
|.. ++ + ..+..+.+.|...+++|++-.|--.+-+++-
T Consensus 99 G~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E 148 (343)
T 2yhw_A 99 GRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAE 148 (343)
T ss_dssp SEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred cCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHH
Confidence 321 11 0 0012234566777889987666655555443
No 35
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.33 E-value=0.037 Score=50.55 Aligned_cols=127 Identities=12% Similarity=0.107 Sum_probs=67.9
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchh-hhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCC
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRE-TAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPG 84 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~-~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg 84 (349)
+||||.+...+.++|++ +|+++...+... .+ |.. ....-.+.+..++++.+ +++.+++..|++.. ||
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~il~~~~~~~-~~------~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~-pG 69 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGRFQTSG-IN------PFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG-AG 69 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEC-CC------TTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE-TT
T ss_pred EEEEEeCccceEEEEEe-CCeEEEEEECCC-CC------cccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC-CC
Confidence 79999999999999999 999988654311 00 100 11111222223333322 44556788888763 66
Q ss_pred CCchhHHHHHHHHHHHhhcC--CCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCeeEEEEE-eCCcEE
Q 018903 85 MGAPLQVAAVVVRVLSQLWK--KPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAY-SEGRYR 150 (349)
Q Consensus 85 ~~t~lr~g~~~ak~la~~~~--~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~~~~~~-~~g~~~ 150 (349)
.- -..+..+.+.|...++ .|+.-.|.-.+-+++.. +. ...++++.|....-..+ .+|++.
T Consensus 70 ~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g~-~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 70 CT--PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---GD-SEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp CC--TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---TT-SCEEEEEESSSEEEEEECSSSEEE
T ss_pred CC--hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---CC-CCcEEEEecCChheEEECCCCcEE
Confidence 43 1223345566777777 47665555555444432 22 23555555544422222 356653
No 36
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.33 E-value=0.011 Score=56.86 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=70.4
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
..++||||.+...+.+++++.+|+++...+... |......-.+.+...+++++++.+++..+|..|+++.
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~- 153 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQEL---------ALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITL- 153 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEEC---------CSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEE-
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecC---------CCCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEe-
Confidence 347899999999999999998899988654321 1111122345667788999998887777888887764
Q ss_pred CCCC---ch-------h--HHHHHHHHHHHhhcCCCeEeeccHHHHHHHh
Q 018903 83 PGMG---AP-------L--QVAAVVVRVLSQLWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 83 Pg~~---t~-------l--r~g~~~ak~la~~~~~p~~~v~hh~aHa~sa 120 (349)
||.. ++ + ..+..+.+.|...+++|++-.|--.+-+++-
T Consensus 154 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE 203 (406)
T 1z6r_A 154 PGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAE 203 (406)
T ss_dssp SSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHH
T ss_pred ecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHH
Confidence 3321 01 1 0122345567777889987666655555443
No 37
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.02 E-value=0.2 Score=46.09 Aligned_cols=99 Identities=14% Similarity=0.150 Sum_probs=58.6
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
.++||||-+.+...++|++.+|+++...+... |......-.+.+..++++++++.+. ++..|+++. |
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~~---~i~gigi~~-p 73 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRT---------AEVIAPGLVSGIGEMIDEQLRRFNA---RCHGLVMGF-P 73 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEH---------HHHHTTCHHHHHHHHHHHHHHHHTE---EEEEEEEEE-S
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecC---------ccccHHHHHHHHHHHHHHHHHhcCC---CeeEEEEec-c
Confidence 37999999999999999998899988654321 1111111223344556666665442 466776654 3
Q ss_pred CCC---------c---hhHH--HHHHHHHHHhhcCCCeEeeccHHH
Q 018903 84 GMG---------A---PLQV--AAVVVRVLSQLWKKPIVAVNHCVA 115 (349)
Q Consensus 84 g~~---------t---~lr~--g~~~ak~la~~~~~p~~~v~hh~a 115 (349)
|.. + +.+- +..+.+.|...+++|++-.|--.+
T Consensus 74 G~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDana 119 (310)
T 3htv_A 74 ALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNL 119 (310)
T ss_dssp SCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHH
T ss_pred ccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHH
Confidence 321 1 1111 134567788888999865444333
No 38
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.86 E-value=0.14 Score=47.41 Aligned_cols=102 Identities=21% Similarity=0.197 Sum_probs=60.3
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
+++||||.+...+.+++++.+|+++...+... |......-.+.+..++++++++.+ ++..|++.. |
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~~-p 89 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWEKRVPT---------PHTSYSAFLDAVCELVEEADQRFG----VKGSVGIGI-P 89 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEC---------CCSCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE-S
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEEEEecC---------CCCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe-e
Confidence 46899999999999999998899988654321 011112233444556666655433 477776654 3
Q ss_pred CCC---ch-h-------HHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 84 GMG---AP-L-------QVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 84 g~~---t~-l-------r~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
|.. ++ + ..+..+.+.|...+++|++-.|--.+.+++
T Consensus 90 G~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalg 136 (327)
T 2ap1_A 90 GMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALS 136 (327)
T ss_dssp SBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHH
T ss_pred eeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHH
Confidence 321 11 0 012234456777788998766665555544
No 39
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.81 E-value=0.2 Score=51.49 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=41.6
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCC
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGS 314 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~ 314 (349)
.++.|+|+||.+.-..+.+.|.+.+ |.++..+. --|.++++|++.+.....+.
T Consensus 334 ~I~~VvLvGGssriP~v~~~l~~~f---g~~~~~~~---nPdeaVA~GAa~~a~~ls~~ 386 (675)
T 3d2f_A 334 EVDFVEIIGGTTRIPTLKQSISEAF---GKPLSTTL---NQDEAIAKGAAFICAIHSPT 386 (675)
T ss_dssp GCCEEEEESGGGGSHHHHHHHHHHH---TSCEECCS---CTTTHHHHHHHHHHHHTCSS
T ss_pred hCcEEEEECCCccChHHHHHHHHhc---CCCccccC---CcchHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999987 45554433 35788999998877666664
No 40
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=96.77 E-value=0.094 Score=50.01 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=42.4
Q ss_pred cEEEEEecCCcceeEEEEEcCC-eEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCC--CCCCEEEE
Q 018903 4 MIALGFEGSANKIGVGVVTLDG-SILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITP--DEIDCLCY 79 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg-~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~--~did~Ia~ 79 (349)
|+||.||+++.+.+.+|++.+. ++++.-..+++ |. .....|.+. ...|-+.|++.++.. ++|++|+.
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~e~i-----g~---~~~~dh~~a-~~~il~~L~~~~~~~~~~~i~aVGh 92 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPASGEFLADGIIEEI-----GS---GAVPDHDAA-LRAAFDELAAAGLHLEDLDLKAVGH 92 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTTTCCEEEEEEECST-----TB---TTBCSHHHH-HHHHHHHHHHTTCCGGGSCEEEEEE
T ss_pred ccEEEEeCCchhheEEEEECCCCceeeeeeeeec-----CC---CCccCHHHH-HHHHHHHHHHcCCCccccceeEEec
Confidence 6899999999999999998444 35554333322 11 112346553 344555666777654 68888864
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.43 E-value=0.017 Score=57.33 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.++.+.+.++ ++.|.++||.+.|..+++.+...+ |.+|.++.. . .+.++|+
T Consensus 370 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~---~-e~~alGa 442 (510)
T 2p3r_A 370 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPEV---R-EVTALGA 442 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESC---C-CHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh---CCceEecCC---C-CcHHHHH
Confidence 467899999999999888888887766544 679999999999999999998887 689988762 2 3677888
Q ss_pred HHHHHHHcCCCCCCcc
Q 018903 305 TGLLAFAHGSSTPLEE 320 (349)
Q Consensus 305 a~~~~~~~~~~~~~~~ 320 (349)
|....+..|...++++
T Consensus 443 A~lA~~a~G~~~~~~~ 458 (510)
T 2p3r_A 443 AYLAGLAVGFWQNLDE 458 (510)
T ss_dssp HHHHHHHHTSSSCGGG
T ss_pred HHHHHHHhCccCCHHH
Confidence 8877777787765554
No 42
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.38 E-value=0.027 Score=55.66 Aligned_cols=87 Identities=10% Similarity=0.085 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.+..+.+.++ ++.|.++||.+.|..+++.+...+ |.+|.++.. ..+.++|+
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~---g~pV~~~~~----~e~~alGa 445 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV---NTSVERPEI----QETTALGA 445 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESC----CCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh---CCceEecCC----CcchHHHH
Confidence 567899999999998888888887766555 679999999999999999999887 689988762 33678898
Q ss_pred HHHHHHHcCCCCCCcc
Q 018903 305 TGLLAFAHGSSTPLEE 320 (349)
Q Consensus 305 a~~~~~~~~~~~~~~~ 320 (349)
|....+..|...++++
T Consensus 446 A~la~~a~G~~~~~~~ 461 (501)
T 3g25_A 446 AFLAGLAVGFWESKDD 461 (501)
T ss_dssp HHHHHHHTTSSSCTHH
T ss_pred HHHHHHHhCccCCHHH
Confidence 8888888888766654
No 43
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.19 E-value=0.031 Score=55.33 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.++.+.+..+ ++.|.++||.+.|..+++.+...+ |.+|.++. ...+.++|+
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGa 444 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL---DIDVQRAA----NLETTALGA 444 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHH---TSEEEECS----SSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHHHHHHHh---CCeEEecC----CCcchhHHH
Confidence 568899999999999888888887766444 679999999999999999999887 68988875 234678888
Q ss_pred HHHHHHHcCCCCCCcc
Q 018903 305 TGLLAFAHGSSTPLEE 320 (349)
Q Consensus 305 a~~~~~~~~~~~~~~~ 320 (349)
|....+..|...++++
T Consensus 445 A~lA~~a~G~~~~~~~ 460 (506)
T 3h3n_X 445 AYLAGLAVGFWKDLDE 460 (506)
T ss_dssp HHHHHHHTTSSCSHHH
T ss_pred HHHHHHHhCccCCHHH
Confidence 8877777787655443
No 44
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.08 E-value=0.031 Score=55.26 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--C-CeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--K-KDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 303 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~-~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG 303 (349)
....++++++.+.++-.+.+.++.+.+..+ + ++|.++||.+.|..+++.+...+ +.+|.++.. ..+.++|
T Consensus 375 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~a~s~~~~Q~~Adv~---g~pV~~~~~----~e~~alG 447 (503)
T 2w40_A 375 TERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDII---NTKIEVSKY----KEVTSLG 447 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCccccCHHHHHHHHHHH---CCeEEecCC----CcchHHH
Confidence 457899999999999888888888766444 5 78999999999999999999887 678888752 2367788
Q ss_pred HHHHHHHHcCCCCCCc
Q 018903 304 YTGLLAFAHGSSTPLE 319 (349)
Q Consensus 304 ~a~~~~~~~~~~~~~~ 319 (349)
+|....+..|....++
T Consensus 448 aA~la~~~~G~~~~~~ 463 (503)
T 2w40_A 448 AAVLAGLEVKIWDSLD 463 (503)
T ss_dssp HHHHHHHHTTCSSCHH
T ss_pred HHHHHHHHhCccCCHH
Confidence 8887778788765443
No 45
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=95.97 E-value=0.94 Score=41.43 Aligned_cols=96 Identities=10% Similarity=0.027 Sum_probs=57.4
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.|++||||-+.....+++++.+|+++...+.. ... .+.+...+.+.+++ .++..|+++.
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~-----------t~~----~~~~l~~i~~~~~~-----~~i~gigi~~- 60 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGREDGTIIDRIEFP-----------TXM----PDETIEXVIQYFSQ-----FSLQAIGIGS- 60 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEE-----------CCC----HHHHHHHHHHHHTT-----SCCSEEEEEE-
T ss_pred CcEEEEEEECcceeEEEEEECCCcEEEEEEec-----------CCC----hHHHHHHHHHHhcc-----CCceEEEEEe-
Confidence 46789999999999999999889998765432 111 11223333333332 3688888765
Q ss_pred CCCC---c-----h------h--HHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 83 PGMG---A-----P------L--QVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 83 Pg~~---t-----~------l--r~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
||.. + | . ..+..+.+.|...+++|++-.|--.|-|.+
T Consensus 61 pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaala 113 (302)
T 3epq_A 61 FGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALG 113 (302)
T ss_dssp CSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHH
T ss_pred ceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHH
Confidence 3321 0 1 0 012345567778889998766655555444
No 46
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.95 E-value=0.03 Score=55.35 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=66.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTG 306 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~ 306 (349)
....++++++.+.++-.+.+.+..+.+...+++|.++||.+.|..+++.+...+ |.+|.++.. . .+.++|+|.
T Consensus 364 ~~~~~l~rAvlEgia~~~~~~l~~l~~~~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~---~-e~~alGaA~ 436 (497)
T 2zf5_O 364 TGREHLARATLEAIAYLTRDVVDEMEKLVQIKELRVDGGATANDFLMQFQADIL---NRKVIRPVV---K-ETTALGAAY 436 (497)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---S-CHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEeCccccCHHHHHHHHhhc---CCeEEEcCC---C-cchHHHHHH
Confidence 567899999988888888877776644335678999999999999999999887 688888762 2 367788887
Q ss_pred HHHHHcCCCCCC
Q 018903 307 LLAFAHGSSTPL 318 (349)
Q Consensus 307 ~~~~~~~~~~~~ 318 (349)
...+..|....+
T Consensus 437 lA~~~~g~~~~~ 448 (497)
T 2zf5_O 437 LAGLAVDYWADT 448 (497)
T ss_dssp HHHHHTTSSCCH
T ss_pred HHHHHhCccCCH
Confidence 777777765443
No 47
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.94 E-value=0.035 Score=54.94 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.+..+.+..+ ++.|.++||.+.|..+++.+...+ |.+|.++.. ..+.++|+
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~----~e~~alGa 444 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQL---GVDVVRPKV----AETTALGA 444 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCcccCHHHHHHHHHHh---CCeEEeCCC----CcchHHHH
Confidence 467899999999999888888887766444 578999999999999999999887 688888752 33677888
Q ss_pred HHHHHHHcCCCCCCc
Q 018903 305 TGLLAFAHGSSTPLE 319 (349)
Q Consensus 305 a~~~~~~~~~~~~~~ 319 (349)
|....+..|....++
T Consensus 445 A~lA~~~~G~~~~~~ 459 (504)
T 2d4w_A 445 AYAAGIAVGFWKGEQ 459 (504)
T ss_dssp HHHHHHHHTSSCSHH
T ss_pred HHHHHhhcCccCCHH
Confidence 877777777665443
No 48
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=95.94 E-value=1.2 Score=42.56 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=41.1
Q ss_pred cCCCeEEEEccch-hcHHHHHHHHHHHHhcCC-------------------------EEEEcCCCCCChHHHHHHHHHHH
Q 018903 255 CDKKDVLIVGGVG-CNERLQEMMRTMCSERGG-------------------------RLFATDDRYCVDNGAMIAYTGLL 308 (349)
Q Consensus 255 ~~~~~v~lsGGVa-~N~~l~~~l~~~l~~~g~-------------------------~v~~~~~~~~~D~G~~iG~a~~~ 308 (349)
-+++.|+++||++ ....+++++.+.+...|+ +|++-| +|.=.+|+.-.+.
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~~~Is~~~s~v~V~ViP----tnEEl~IA~~~~~ 404 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIP----TNEEKMIALDAIH 404 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTTGGGTCCBCHHHHHSCGGGCSEECBCTTCSSEEEECC----CCHHHHHHHHHHH
T ss_pred CCCCEEEECccccccCHHHHHHHHhhHhhcCccccHhHhcccccCCCceeeCCCCCceEEEEC----ChHHHHHHHHHHH
Confidence 4689999999999 778899999988877663 455544 6777799998877
Q ss_pred HH
Q 018903 309 AF 310 (349)
Q Consensus 309 ~~ 310 (349)
.+
T Consensus 405 ll 406 (415)
T 2e1z_A 405 LG 406 (415)
T ss_dssp HT
T ss_pred Hh
Confidence 55
No 49
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.88 E-value=0.032 Score=54.91 Aligned_cols=86 Identities=20% Similarity=0.236 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAH-CDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~-~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a 305 (349)
....++++++.+.++-.+.+.++.+.+. ..++.|.++||.+.|..+++.+...+ |.+|.+++ ..+.+.++|+|
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~---~~e~~~alGAA 429 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS---GQQLDYRT---GGDVGPALGAA 429 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH---CCCEEEES---CTTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh---CCeEEeCC---CCCcccHHHHH
Confidence 4578999999999988888887776442 23578999999999999999999887 68888886 33434677777
Q ss_pred HHHHHHcCCCCCC
Q 018903 306 GLLAFAHGSSTPL 318 (349)
Q Consensus 306 ~~~~~~~~~~~~~ 318 (349)
....+..|....+
T Consensus 430 ~lA~~~~g~~~~~ 442 (484)
T 2itm_A 430 RLAQIAANPEKSL 442 (484)
T ss_dssp HHHHHHHCTTSCH
T ss_pred HHHHHHcCCcCCH
Confidence 6666666765443
No 50
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.83 E-value=0.036 Score=54.67 Aligned_cols=82 Identities=11% Similarity=0.093 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~ 304 (349)
....++++++.+.++-.+.+.++.+.+..+ ++.|.++||.+.|..+++.+...+ +.+|.++.. ..+.++|+
T Consensus 367 ~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~---g~pV~~~~~----~e~~alGa 439 (495)
T 2dpn_A 367 TSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL---GVPVAVPEV----TETTALGA 439 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh---CCeeEecCC----cccHHHHH
Confidence 568999999999999888888887765444 468999999999999999999887 688888762 23677788
Q ss_pred HHHHHHHcCCC
Q 018903 305 TGLLAFAHGSS 315 (349)
Q Consensus 305 a~~~~~~~~~~ 315 (349)
|....+..|..
T Consensus 440 A~la~~a~G~~ 450 (495)
T 2dpn_A 440 ALMAGVGAGAL 450 (495)
T ss_dssp HHHHHHHHTSC
T ss_pred HHHHHhhcCcC
Confidence 77776766765
No 51
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.78 E-value=0.039 Score=54.86 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=67.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH---c-CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAH---C-DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMI 302 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~---~-~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~i 302 (349)
....++++++.+.++-.+.+.++.+.+. + .++.|.++||.+.|..+++.+...+ |.+|.++.. ..+.++
T Consensus 392 ~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~~----~e~~al 464 (520)
T 4e1j_A 392 TGPAEFARAALEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGMVASDWTMQRLSDLL---DAPVDRPVI----LETTAL 464 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----CCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcceEEEeCccccCHHHHHHHHHHh---CCeEEecCC----CccHHH
Confidence 4678999999999988888887776654 2 4678999999999999999999887 688888762 336778
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 018903 303 AYTGLLAFAHGSSTPLEE 320 (349)
Q Consensus 303 G~a~~~~~~~~~~~~~~~ 320 (349)
|+|....+..|...++++
T Consensus 465 GAA~lA~~a~G~~~~~~~ 482 (520)
T 4e1j_A 465 GVAWLAGSRAGVWPNQEA 482 (520)
T ss_dssp HHHHHHHHHHTSSCCHHH
T ss_pred HHHHHHHHHcCCcCCHHH
Confidence 888877777787765543
No 52
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.73 E-value=0.064 Score=53.15 Aligned_cols=84 Identities=18% Similarity=0.060 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEE-EEcCCCCCChHHHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRL-FATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v-~~~~~~~~~D~G~~iG~a 305 (349)
....++++++.+.++-.+.+.++.+.+.. ++.|.++||.+.|..+++.+...+ |.+| .++. ...+.++|+|
T Consensus 374 ~~~~~l~RAvlEgia~~~~~~~~~l~~g~-~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~----~~e~~alGaA 445 (511)
T 3hz6_A 374 TTRAQILLAVLEGAALSLRWCAELLGMEK-VGLLKVVGGGARSEAWLRMIADNL---NVSLLVKPD----AHLHPLRGLA 445 (511)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTGGG-CCEEEEESGGGGCHHHHHHHHHHH---TCEEEECCC----GGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhcCHHHHHHHHHHH---CCeeEEecC----CCCchHHHHH
Confidence 46789999999988888888777665422 889999999999999999999887 6888 7764 4567788998
Q ss_pred HHHHHHcCCCCCC
Q 018903 306 GLLAFAHGSSTPL 318 (349)
Q Consensus 306 ~~~~~~~~~~~~~ 318 (349)
....+..|...++
T Consensus 446 ~lA~~a~G~~~~~ 458 (511)
T 3hz6_A 446 ALAAVELEWSHSI 458 (511)
T ss_dssp HHHHHHTTSCSCH
T ss_pred HHHHHHhCCcCCH
Confidence 8888888877655
No 53
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=95.73 E-value=0.81 Score=43.45 Aligned_cols=69 Identities=12% Similarity=0.030 Sum_probs=43.0
Q ss_pred cEEEEEecCCcceeEEEEEc-CCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCC--CCCCEEEE
Q 018903 4 MIALGFEGSANKIGVGVVTL-DGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITP--DEIDCLCY 79 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~-dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~--~did~Ia~ 79 (349)
|+||.||+++.+.+.+|++. ++++++.-..+++ |. |......|...+.. |-+.|++.++.. ++|++|..
T Consensus 12 M~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~i-----g~-~~~~~~~h~~a~~~-il~~L~~~~~~~~~~~i~aVGh 83 (391)
T 3r9p_A 12 RRVLVINSGSSSLKFQLVDPEFGVAASTGIVERI-----GE-ESSPVPDHDAALRR-AFDMLAGDGVDLNTAGLVAVGH 83 (391)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTEEEEEEEECCT-----TC-TTCSCCSHHHHHHH-HHHHHHHTTCCTTTTTEEEEEE
T ss_pred ceEEEEecCchhheeEEEecCCCceEEEEEEeec-----CC-CccCccCHHHHHHH-HHHHHHhcCCCCcccceeEEec
Confidence 78999999999999999984 3566654443432 11 11122345555444 445556666544 68888864
No 54
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.60 E-value=0.023 Score=57.04 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=64.6
Q ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHH
Q 018903 228 TPADL---CYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMI 302 (349)
Q Consensus 228 ~~~di---A~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~i 302 (349)
.+.++ .+++.+.++-.+.+.+..+.+ .+ ++.|.++||.+.|..+++.+...+ |.+|.++. ...+.++
T Consensus 410 ~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~~~~i~~~GG~aks~~~~Qi~ADv~---g~pV~~~~----~~e~~al 481 (554)
T 3l0q_A 410 TPEDMALRYLATIQALALGTRHIIETMNQ-NGYNIDTMMASGGGTKNPIFVQEHANAT---GCAMLLPE----ESEAMLL 481 (554)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCCEEEEESGGGGCHHHHHHHHHHH---CCEEEEES----CSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccCHHHHHHHHHhh---CCeEEecC----CCcchHH
Confidence 47888 557777776666666655543 44 578999999999999999999887 78998876 2347788
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 018903 303 AYTGLLAFAHGSSTPLEE 320 (349)
Q Consensus 303 G~a~~~~~~~~~~~~~~~ 320 (349)
|+|....+..|...++++
T Consensus 482 GAA~lA~~a~G~~~~~~~ 499 (554)
T 3l0q_A 482 GSAMMGTVAAGVFESLPE 499 (554)
T ss_dssp HHHHHHHHHTTSSSSHHH
T ss_pred HHHHHHHHHcCCcCCHHH
Confidence 998888888888766654
No 55
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.29 E-value=0.045 Score=54.17 Aligned_cols=80 Identities=15% Similarity=0.292 Sum_probs=54.4
Q ss_pred CCCc-EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 1 MKRM-IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 1 m~~m-~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
|+.| ++||||.++..+.++|++.+|++++..+.... ..+..|.. ......-.+.+...++++++++++..++|.+|+
T Consensus 1 m~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Ig 79 (506)
T 3h3n_X 1 MAEKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWV-EHNANEIWNSVQSVIAGAFIESGIRPEAIAGIG 79 (506)
T ss_dssp -CCCCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CCCCCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcE-EECHHHHHHHHHHHHHHHHHHcCCChhheEEEE
Confidence 6533 79999999999999999999999987543211 01111221 112223455566788888898888888999998
Q ss_pred Eec
Q 018903 79 YTR 81 (349)
Q Consensus 79 ~~~ 81 (349)
++.
T Consensus 80 is~ 82 (506)
T 3h3n_X 80 ITN 82 (506)
T ss_dssp EEE
T ss_pred eeC
Confidence 874
No 56
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.26 E-value=0.11 Score=51.55 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH
Q 018903 228 TPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 228 ~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a 305 (349)
...++++++.+.++-.+.+.+..+.+ .+ ++.|.++||.+.|..+++.+...+ |.+|.++.. ..+.++|+|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~~----~e~~alGAA 466 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLELIRS-LGASITRILLIGGGAKSEAIRTLAPSIL---GMDVTRPAT----DEYVAIGAA 466 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEECC----CCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEECchhcCHHHHHHHHHHh---CCceEecCC----cccHHHHHH
Confidence 67899999999888888887776654 44 578999999999999999999887 678888762 336678888
Q ss_pred HHHHHHcCCCC
Q 018903 306 GLLAFAHGSST 316 (349)
Q Consensus 306 ~~~~~~~~~~~ 316 (349)
....+..|...
T Consensus 467 ~lA~~a~G~~~ 477 (515)
T 3i8b_A 467 RQAAWVLSGET 477 (515)
T ss_dssp HHHHHHHHCCS
T ss_pred HHHHHHcCCCC
Confidence 77777777653
No 57
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=95.21 E-value=0.97 Score=41.13 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=63.0
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCC--CEEEEecC
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEI--DCLCYTRG 82 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~di--d~Ia~~~g 82 (349)
++||||.+...+.++|++.+|+++...+... ..+......-.+.+..++++++++.+++.++| ..|++..
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~-------~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig~- 83 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPLAMAEGGA-------SALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGL- 83 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEEEEEEESC-------CCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEE-
T ss_pred EEEEEEcCccceEEEEEcCCCCEEEEEeCCC-------CCcccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEEe-
Confidence 6899999999999999998899987653210 00111122345667778899999988877777 5666653
Q ss_pred CCCCchhHHHHHHHHHHHhhc--CCCeEeeccHHHHHHH
Q 018903 83 PGMGAPLQVAAVVVRVLSQLW--KKPIVAVNHCVAHIEM 119 (349)
Q Consensus 83 Pg~~t~lr~g~~~ak~la~~~--~~p~~~v~hh~aHa~s 119 (349)
||....-. +. .|...+ +.|+.-.|--.+-+++
T Consensus 84 pG~v~~~~-~~----~l~~~~~~~~pv~v~NDa~aaa~g 117 (305)
T 1zc6_A 84 SGVHNRQW-AG----EFESQAPGFARLSLATDGYTTLLG 117 (305)
T ss_dssp SCCCTTSH-HH----HHHHTCCCCSEEEEECHHHHHHHH
T ss_pred cCCCchHH-HH----HHHHhCCCCceEEEECCHHHHHHh
Confidence 44322111 11 144445 5777665655554333
No 58
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.13 E-value=0.052 Score=54.00 Aligned_cols=76 Identities=18% Similarity=0.288 Sum_probs=52.8
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++++++.++|.+|+++.
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~-e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~ 103 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWV-EHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGITN 103 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEE
T ss_pred eEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcE-EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeC
Confidence 68999999999999999989999987543211 00111221 112233455666788888998888888999998764
No 59
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=95.07 E-value=2.2 Score=39.87 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=36.1
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHH
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLA 309 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~ 309 (349)
.++.|+|+||.+....+.++|.+.+. +.++..++ --|.++++|++.+..
T Consensus 343 ~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~ 391 (394)
T 3qfu_A 343 DVDDIVLVGGSTRIPKVQQLLESYFD--GKKASKGI---NPDEAVAYGAAVQAG 391 (394)
T ss_dssp GCCEEEEESGGGGSHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHHHHH
T ss_pred HCCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHHHHH
Confidence 46799999999999999999999763 34444443 345678888876543
No 60
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=94.95 E-value=0.16 Score=46.05 Aligned_cols=62 Identities=21% Similarity=0.246 Sum_probs=46.4
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
++|+||.++..+..++++ +++++...+... . .+-...+...+..+++..++++++|+.|+++
T Consensus 3 MlL~IDIGNT~iK~gl~d-~~~l~~~~r~~T-----------~--~~t~de~~~~l~~ll~~~~~~~~~I~~iiIS 64 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD-GDEIKLRFRHTS-----------K--VSTSDELGIFLKSVLRENNCSPETIRKIAIC 64 (266)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEEC-----------S--CCCHHHHHHHHHHHHHTTTCCGGGCCEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecC-----------C--CCCHHHHHHHHHHHHHHcCCChhhceEEEEe
Confidence 489999999999999999 788887654321 1 1112234567888999999988999988766
No 61
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=94.93 E-value=2 Score=38.64 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=45.9
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
+|.||.++..+..++++ +++++...+... ...+-...+...+..+++..++++.+|+.|+++
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T------------~~~~t~de~~~~l~~ll~~~~~~~~~i~~iiIS 63 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMET------------DRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVS 63 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEC------------CTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecC------------CCcCCHHHHHHHHHHHHHHcCCCcccCcEEEEE
Confidence 79999999999999999 888887655331 001112344567888999999988899988765
No 62
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.88 E-value=0.065 Score=52.95 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=54.1
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
|+ +++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++++++.++|.+|++
T Consensus 4 M~-~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igi 81 (501)
T 3g25_A 4 ME-KYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWV-EHDANEIWTSVLAVMTEVINENDVRADQIAGIGI 81 (501)
T ss_dssp CC-CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred cc-cEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcE-EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 53 378999999999999999989999986543211 01111221 1122233455667888889988888889999988
Q ss_pred ec
Q 018903 80 TR 81 (349)
Q Consensus 80 ~~ 81 (349)
+.
T Consensus 82 s~ 83 (501)
T 3g25_A 82 TN 83 (501)
T ss_dssp EE
T ss_pred EC
Confidence 74
No 63
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=94.83 E-value=1.2 Score=42.13 Aligned_cols=100 Identities=11% Similarity=0.215 Sum_probs=60.6
Q ss_pred CcEEEEEecCCcceeEEEEEcCCeEEEee-eeeccCCCCCCCcchhhhhhHHhhHHHHHHH---HHHHcCCCCCCCCEEE
Q 018903 3 RMIALGFEGSANKIGVGVVTLDGSILSNP-RHTYFTPPGQGFLPRETAQHHLEHVLPLVKS---ALKTAGITPDEIDCLC 78 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~~dg~i~~~~-~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~---~L~~~~i~~~did~Ia 78 (349)
.-++||||-+.....+++++ +|+++... +.. .... -.+.+...+.+ .+++. +. .++..|+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~-----------~~~~--~~~~~l~~i~~~~~~i~~~-~~-~~i~gIG 71 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLP-----------ACAD--CLDKCLGNLVEGFKAIQAG-LP-EAPVAIS 71 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-TTEECSCCEEEE-----------CCTT--CHHHHHHHHHHHHHHHHTT-CS-SCCCEEE
T ss_pred CCEEEEEEECcceEEEEEEE-CCEEEEEEEEEE-----------CCCC--CHHHHHHHHHHHHHHHHHH-hh-cCCeEEE
Confidence 34689999999999999999 99998754 322 1100 12233333444 44432 22 5788998
Q ss_pred EecCCCCC----------c---hhHHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 79 YTRGPGMG----------A---PLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 79 ~~~gPg~~----------t---~lr~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
+.. ||.. + +++-+..+.+.|...+++|++-.|--.|-|++
T Consensus 72 Iav-PG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlg 124 (366)
T 3mcp_A 72 FAF-PGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYG 124 (366)
T ss_dssp EEC-CSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHH
T ss_pred EEe-cceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHH
Confidence 775 4421 1 22213445667888889998766655555444
No 64
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.77 E-value=0.078 Score=52.53 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=54.3
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
+++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++++++.++|.+|+++.
T Consensus 3 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 80 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWV-EHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN 80 (510)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE
T ss_pred cEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcE-EECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeC
Confidence 579999999999999999989999986643211 11111221 112223455667788899999998888999998774
No 65
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=94.73 E-value=0.31 Score=46.76 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHc-C-CCeEEEEccchhcHH-HHHHHHHHHHhcCC
Q 018903 233 CYSLQETLFAMLVEITERAMAHC-D-KKDVLIVGGVGCNER-LQEMMRTMCSERGG 285 (349)
Q Consensus 233 A~~~q~~l~~~l~~~~~~~~~~~-~-~~~v~lsGGVa~N~~-l~~~l~~~l~~~g~ 285 (349)
|.-.-+.+...+.+.+....... | ++.|+++||++-|+. +|+++-+.|...|+
T Consensus 314 A~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~l~~lGi 369 (415)
T 3sk3_A 314 AKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGF 369 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHTCGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhhchhcCe
Confidence 44344444555555444443333 5 899999999997655 45677666654443
No 66
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.66 E-value=0.075 Score=52.66 Aligned_cols=75 Identities=12% Similarity=0.195 Sum_probs=51.5
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+.... ..+..|.. ......-.+.+...+++++ +++++.++|.+|+++.
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~ 81 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPV-EQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSG 81 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCC-EECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEE
T ss_pred EEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCE-EECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEec
Confidence 79999999999999999989999987643211 11111221 1222334455666777877 7777788999999875
No 67
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.62 E-value=0.17 Score=50.51 Aligned_cols=80 Identities=19% Similarity=0.342 Sum_probs=53.4
Q ss_pred CCCc-EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 1 MKRM-IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 1 m~~m-~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
|+.| ++||||.++..+.++|++.+|++++..+.... ..+..|.. ......-.+.+...++++++++++..++|.+|+
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~-eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Ig 79 (554)
T 3l0q_A 1 MSLASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFV-EQSSENIWQAVCNAVRDAVNQADINPIQVKGLG 79 (554)
T ss_dssp ---CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEE-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CCCCcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEE
Confidence 6665 78999999999999999999999986543210 00001211 122233455666788888988888888999998
Q ss_pred Eec
Q 018903 79 YTR 81 (349)
Q Consensus 79 ~~~ 81 (349)
++.
T Consensus 80 is~ 82 (554)
T 3l0q_A 80 FDA 82 (554)
T ss_dssp EEE
T ss_pred EcC
Confidence 764
No 68
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.53 E-value=0.33 Score=47.56 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHH
Q 018903 226 ECTPADLCYSLQETLFAMLVEITERAMAHC--DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 303 (349)
Q Consensus 226 ~~~~~diA~~~q~~l~~~l~~~~~~~~~~~--~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG 303 (349)
.....++++++.+.++-.+.+.+..+.+.. .++.|.++||.+.|..+++.+...+ |.+|.+++ ..+.++|
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~-----~e~~alG 432 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADAC---GIRVIAGP-----VEASTLG 432 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEECC-----TTHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHH---CCeeecCC-----ccHhHHH
Confidence 356899999999999998888888876644 4679999999999999999999887 67887653 2457778
Q ss_pred HHHHHHHHcCC
Q 018903 304 YTGLLAFAHGS 314 (349)
Q Consensus 304 ~a~~~~~~~~~ 314 (349)
++....+..+.
T Consensus 433 aa~~A~~a~~~ 443 (489)
T 2uyt_A 433 NIGIQLMTLDE 443 (489)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHcCc
Confidence 86666555443
No 69
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.51 E-value=0.055 Score=54.43 Aligned_cols=86 Identities=14% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEEccch-hcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHH
Q 018903 227 CTPADLCYSLQETLFAMLVEITERAMAHCDK--KDVLIVGGVG-CNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 303 (349)
Q Consensus 227 ~~~~diA~~~q~~l~~~l~~~~~~~~~~~~~--~~v~lsGGVa-~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG 303 (349)
....++++++.+.++-.+.+.+..+.+ .+. +.|.++||.+ .|..+++.+...+ |.+|.++. ...+.++|
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~ks~~~~Qi~ADv~---g~pV~~~~----~~e~~alG 480 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDAFHG-RGVEVHELYACGGLPQKNHLLMQIFADVT---NREIKVAA----SKQTPALG 480 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEEESSHHHHCHHHHHHHHHHH---TSCEEEBC----CSSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcCEEEEEcCchhhCHHHHHHHHHHH---CCeeEecC----CCccHHHH
Confidence 457899999998888888877776644 554 6899999999 9999999999887 68888876 24567788
Q ss_pred HHHHHHHHcC----CCCCCcc
Q 018903 304 YTGLLAFAHG----SSTPLEE 320 (349)
Q Consensus 304 ~a~~~~~~~~----~~~~~~~ 320 (349)
+|....+..| ...++++
T Consensus 481 aA~lA~~a~G~~~~~~~~~~e 501 (572)
T 3jvp_A 481 AAMFASVAAGSEVGGYDSIEE 501 (572)
T ss_dssp HHHHHHHHHCSSSSSCSCHHH
T ss_pred HHHHHHHhcCCCccccCCHHH
Confidence 8877777777 5555543
No 70
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=94.06 E-value=4.3 Score=38.71 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=24.5
Q ss_pred cCCCeEEEEccch-hcHHHHHHHHHHHHhcC
Q 018903 255 CDKKDVLIVGGVG-CNERLQEMMRTMCSERG 284 (349)
Q Consensus 255 ~~~~~v~lsGGVa-~N~~l~~~l~~~l~~~g 284 (349)
.+++.|+++||++ ....+++++.+.+...|
T Consensus 321 ggvDaIVFTgGIGEns~~vR~~i~~~l~~lG 351 (403)
T 2iir_A 321 NGVDAIVFTAGVGENSPITREDVCSYLEFLG 351 (403)
T ss_dssp TCCSEEEEEHHHHTTCHHHHHHHHHTTGGGT
T ss_pred CCCCEEEECcccccCCHHHHHHHHhhhhhcc
Confidence 4799999999999 77788888887766544
No 71
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=94.04 E-value=3.1 Score=36.97 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=39.7
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
|..| +|.||.++.....++++ +++++...+... . ..+-...+...+..+++. ...+++.|+++
T Consensus 1 ~~~M-~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T--~----------~~~t~de~~~~l~~l~~~---~~~~i~~i~Is 63 (249)
T 3bex_A 1 MDPM-YLLVDVGNTHSVFSITE-DGKTFRRWRLST--G----------VFQTEDELFSHLHPLLGD---AMREIKGIGVA 63 (249)
T ss_dssp CCCE-EEEEEECSSEEEEEEES-SSSSCEEEEEEC--C----------TTCCHHHHHHHHHHHHGG---GGGGEEEEEEE
T ss_pred CCce-EEEEEECCCeEEEEEEE-CCEEEEEEEecC--C----------CCCCHHHHHHHHHHHHhh---ccccCCEEEEE
Confidence 6677 69999999999999999 788776554321 0 001122333456666654 34567766654
No 72
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=93.89 E-value=0.26 Score=49.44 Aligned_cols=80 Identities=15% Similarity=0.225 Sum_probs=49.4
Q ss_pred CCCc-EEEEEecCCcceeEEEEEc-CCeEEEeeeeecc------CCCC------CCCcchhhhhhHHhhHHHHHHHHHHH
Q 018903 1 MKRM-IALGFEGSANKIGVGVVTL-DGSILSNPRHTYF------TPPG------QGFLPRETAQHHLEHVLPLVKSALKT 66 (349)
Q Consensus 1 m~~m-~iLgIdts~~~~sval~~~-dg~i~~~~~~~~~------~~~~------~g~~p~~~~~~h~~~l~~~i~~~L~~ 66 (349)
|+.| ++||||.++..+.++|++. +|++++....... ..+. .|+. ......-.+.+...+++++++
T Consensus 1 m~~~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-eqdp~~~~~~~~~~i~~~l~~ 79 (572)
T 3jvp_A 1 MSLTKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWA-LQHPLDYVEVLTTSVPAVMKE 79 (572)
T ss_dssp ----CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCC-EECHHHHHHHHTTHHHHHHHC
T ss_pred CCCCCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcE-EECHHHHHHHHHHHHHHHHHH
Confidence 6544 7899999999999999997 9999987643211 0000 1111 111112234556678899998
Q ss_pred cCCCCCCCCEEEEec
Q 018903 67 AGITPDEIDCLCYTR 81 (349)
Q Consensus 67 ~~i~~~did~Ia~~~ 81 (349)
+++..++|.+|+++.
T Consensus 80 ~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 80 SGVDADDVIGIGVDF 94 (572)
T ss_dssp ---CCSCEEEEEEEE
T ss_pred cCCChhHEEEEEEec
Confidence 888888999998775
No 73
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=93.80 E-value=0.16 Score=50.07 Aligned_cols=75 Identities=16% Similarity=0.314 Sum_probs=52.2
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeec--cCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTY--FTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~--~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+... ...+ .|.. ......-.+.+...+++++++.++..++|.+|+++.
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~-~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis~ 80 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPR-PGWV-EHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTN 80 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCS-TTCC-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred EEEEEecCCchhEEEEECCCCCEEEEEEeccceecCC-CCcE-EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEec
Confidence 6899999999999999998899988664321 1111 1221 112233455666788888888888888899998874
No 74
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.46 E-value=0.18 Score=49.58 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=52.6
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++.++..++|.+|+++.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~-e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~ 79 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWV-EHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITN 79 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCC-EECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred EEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcE-eeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeC
Confidence 68999999999999999989999886643211 00111211 112233455667788888888888888999998774
No 75
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=93.43 E-value=0.14 Score=50.89 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=50.0
Q ss_pred CCC-cEEEEEecCCcceeEEEEE-cCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 1 MKR-MIALGFEGSANKIGVGVVT-LDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 1 m~~-m~iLgIdts~~~~sval~~-~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
|+. +++||||.++..+.++|++ .+|++++..+... .|.. .+..+.+...+.+++++++. .++|.+|+
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~-----~g~~-----e~d~~~~~~~i~~~l~~~~~-~~~I~~Ig 69 (515)
T 3i8b_A 1 MSLRTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKH-----PNGT-----SVDPSYWWSAFQEAAEQAGG-LDDVSALA 69 (515)
T ss_dssp -CCSCEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----CSSS-----EECTHHHHHHHHHHHHHTTC-STTEEEEE
T ss_pred CCCCcEEEEEEeccccEEEEEEECCCCeEEEEEEEeC-----CCCc-----eECHHHHHHHHHHHHHhcCC-ccCceEEE
Confidence 644 3799999999999999999 8999998764321 1110 11223455678888888876 58899998
Q ss_pred Eec
Q 018903 79 YTR 81 (349)
Q Consensus 79 ~~~ 81 (349)
++.
T Consensus 70 is~ 72 (515)
T 3i8b_A 70 VGG 72 (515)
T ss_dssp EEE
T ss_pred EeC
Confidence 875
No 76
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=93.29 E-value=0.17 Score=50.35 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHH
Q 018903 228 TPADLCYSLQETLFAMLVEITERAMAHCD--KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYT 305 (349)
Q Consensus 228 ~~~diA~~~q~~l~~~l~~~~~~~~~~~~--~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a 305 (349)
...++++++.+.++-.+.+.++.+. ..+ ++.|.++||.+.|..+++.+...+ |.+|.++. ...+.++|+|
T Consensus 405 ~~~~l~RAvlEgia~~~r~~~~~l~-~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 476 (538)
T 4bc3_A 405 PGDVEVRALIEGQFMAKRIHAEGLG-YRVMSKTKILATGGASHNREILQVLADVF---DAPVYVID----TANSACVGSA 476 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTT-CCCCTTCCEEEEEGGGGCHHHHHHHHHHH---TSCEEECC----CTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCeEEEEcchhcCHHHHHHHHHHh---CCceEecC----CCCchHHHHH
Confidence 4578888888888777666665442 233 468999999999999999999887 68888875 2346667776
Q ss_pred HHHHHHcCC
Q 018903 306 GLLAFAHGS 314 (349)
Q Consensus 306 ~~~~~~~~~ 314 (349)
....+..|.
T Consensus 477 ~lA~~a~G~ 485 (538)
T 4bc3_A 477 YRAFHGLAG 485 (538)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhCc
Confidence 666555554
No 77
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=93.01 E-value=0.18 Score=41.58 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=54.1
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEee-eeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNP-RHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~-~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
|.|||||-+...+++|+.+..|.+.... ... ... .....+...|..++++ .+++.|++..
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~-----------~~~--~r~~~~~~~l~~li~~-----~~~~~ivVGl- 63 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIK-----------INE--AEGDYGLSRLSELIKD-----YTIDKIVLGF- 63 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEE-----------CBG--GGTBCCHHHHHHHHTT-----SEEEEEEEEC-
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEE-----------cCC--cchHHHHHHHHHHHHH-----cCCCEEEEee-
Confidence 8899999999999999999666554311 110 000 0112233456666654 3688999872
Q ss_pred CCC---CchhHH--HHHHHHHHHhhcCCCeEeec
Q 018903 83 PGM---GAPLQV--AAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 83 Pg~---~t~lr~--g~~~ak~la~~~~~p~~~v~ 111 (349)
|-. -++... ...|++.|+...++|++.|+
T Consensus 64 P~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 64 PKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp CCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eecCCcchhHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 311 122333 24567677766789999855
No 78
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=92.46 E-value=0.29 Score=48.21 Aligned_cols=76 Identities=14% Similarity=0.157 Sum_probs=50.6
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHc--CCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTA--GITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~--~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++. ++..++|.+|+++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis~ 83 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWY-EHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGITN 83 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCC-EECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcE-EECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEcC
Confidence 68999999999999999989999886643211 00111211 1122233555667788888776 67677899998774
No 79
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=91.70 E-value=0.35 Score=40.14 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=20.2
Q ss_pred cEEEEEecCCcceeEEEEEcCCe
Q 018903 4 MIALGFEGSANKIGVGVVTLDGS 26 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~ 26 (349)
|.|||||-+...++.++++.+|+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETT
T ss_pred CEEEEEccCCCCeeEEEEEecCC
Confidence 78999999999999999986664
No 80
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=91.44 E-value=0.5 Score=46.54 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=52.6
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeecc-CCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYF-TPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~-~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
.++||||.++..+.++|++.+|++++..+.... ..+-.|.. ......-.+.+...+++++++.++..++|.+|+++.
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~-e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~ 79 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWV-EHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITN 79 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCce-eECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEeC
Confidence 368999999999999999989999886643211 00111221 112223455666788888888888778899998774
No 81
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.26 E-value=0.35 Score=47.55 Aligned_cols=70 Identities=10% Similarity=0.067 Sum_probs=45.3
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
++||||.++..+.++|++.+|++++..+......+..|. .....+.+...+..++++.- ..+|.+|+++.
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~-----~eqdp~~~~~~~~~~i~~~~--~~~I~aIgis~ 76 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGI-----RRLDAPDTGRWLLDVLSRYA--DHPVTTIVPVG 76 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSC-----EECCHHHHHHHHHHHHHHTT--TSCCCEEEEEE
T ss_pred eEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCc-----eeECHHHHHHHHHHHHHHHH--hcCCCEEEEec
Confidence 789999999999999999899999876543210000111 11223445566667777653 36899998774
No 82
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=90.99 E-value=0.52 Score=46.87 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=49.7
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeec--cCCC---CCCCc--c----hhhhhhHHhhHHHHHHHHHHHcCCCCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTY--FTPP---GQGFL--P----RETAQHHLEHVLPLVKSALKTAGITPD 72 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~--~~~~---~~g~~--p----~~~~~~h~~~l~~~i~~~L~~~~i~~~ 72 (349)
.++||||.++..+.++|++.+|++++...... ...+ -.|+. | +.....-.......+...|+++++..+
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~~~~~~~~ 89 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKASGFDFS 89 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHHHcCCChH
Confidence 37999999999999999999999998764332 1111 02321 0 000011122233445566778888889
Q ss_pred CCCEEEEec
Q 018903 73 EIDCLCYTR 81 (349)
Q Consensus 73 did~Ia~~~ 81 (349)
+|.+|+++.
T Consensus 90 ~I~aIgis~ 98 (538)
T 4bc3_A 90 QVLALSGAG 98 (538)
T ss_dssp GEEEEEEEE
T ss_pred HeEEEEecc
Confidence 999999875
No 83
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=90.19 E-value=1.8 Score=32.72 Aligned_cols=88 Identities=15% Similarity=0.084 Sum_probs=52.5
Q ss_pred cEEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP 83 (349)
|.+||||-+...+.+|+.+..+ .++.-... .+ ++........|.+++++- +++.|++.. |
T Consensus 1 mriLglD~G~kriGvAvsd~~~-~~A~pl~t---------i~----~~~~~~~~~~l~~li~e~-----~v~~iVvGl-P 60 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGV-PLASGRGY---------LV----RKTLEEDVEALLDFVRRE-----GLGKLVVGL-P 60 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCC-SSCCCEEE---------EE----CCCHHHHHHHHHHHHHHH-----TCCEEEEEC-C
T ss_pred CcEEEEEeCCCEEEEEEEeCCC-CeeeeeEE---------EE----ccCcHHHHHHHHHHHHHc-----CCCEEEEee-c
Confidence 5689999999999999999444 33321110 00 011223345566666654 588999873 3
Q ss_pred ----CCCc-hhHHHHHHHHHHHhhcCCCeEeecc
Q 018903 84 ----GMGA-PLQVAAVVVRVLSQLWKKPIVAVNH 112 (349)
Q Consensus 84 ----g~~t-~lr~g~~~ak~la~~~~~p~~~v~h 112 (349)
|..+ --+....|++.|... ++|++.+..
T Consensus 61 ~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 61 LRTDLKESAQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred cCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 2111 122334677778776 888887764
No 84
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=89.81 E-value=0.18 Score=49.40 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=46.1
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeeeee--ccCCCCCCCcchhh-hhhHHhhHHHHHHHHHHHcCCCCCCCCEE
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPRHT--YFTPPGQGFLPRET-AQHHLEHVLPLVKSALKTAGITPDEIDCL 77 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~~~--~~~~~~~g~~p~~~-~~~h~~~l~~~i~~~L~~~~i~~~did~I 77 (349)
|+.+++||||.++..+.++|++.+|+++.....+ +..+ +..|..- .....+.+...+..++++......+|.+|
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~---~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~~~i~~I 77 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNN---GLHSQNGYVTWDVDSLESAIRLGLNKVCAAGIAIDSI 77 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEEC---CCEEETTEEECCHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCC---CccccCCeEEECHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 8877899999999999999999788877643221 1100 1111110 01123344556666665542234589999
Q ss_pred EEec
Q 018903 78 CYTR 81 (349)
Q Consensus 78 a~~~ 81 (349)
+++.
T Consensus 78 gis~ 81 (489)
T 2uyt_A 78 GIDT 81 (489)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8776
No 85
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=89.78 E-value=0.83 Score=38.19 Aligned_cols=23 Identities=30% Similarity=0.755 Sum_probs=20.7
Q ss_pred cEEEEEecCCcceeEEEEEcCCe
Q 018903 4 MIALGFEGSANKIGVGVVTLDGS 26 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~ 26 (349)
|+|||||-+...+..++++.+|+
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSS
T ss_pred CEEEEEccccCceEEEEEEecCC
Confidence 78999999999999999986664
No 86
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=89.02 E-value=1.9 Score=38.40 Aligned_cols=108 Identities=21% Similarity=0.227 Sum_probs=60.1
Q ss_pred CCcEEEEEecCCcceeEEEEEcC-CeEEEee-eeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 2 KRMIALGFEGSANKIGVGVVTLD-GSILSNP-RHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 2 ~~m~iLgIdts~~~~sval~~~d-g~i~~~~-~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
+.|++||||-+.+.+.+++++.+ |+++... +... .. ......-.+.+...+++++++.+. ...+..|++
T Consensus 10 ~~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~--~~------~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~igi 80 (267)
T 1woq_A 10 KNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPT--PQ------PATPESVAEAVALVVAELSARPEA-PAAGSPVGV 80 (267)
T ss_dssp -CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEEC--CS------SCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEEE
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCC--Cc------cCCHHHHHHHHHHHHHHHHHhccc-cCccceEEE
Confidence 56889999999999999999965 7887532 2110 00 001112234455566666654331 123445665
Q ss_pred ecCCCCC--------chh---HHHHHHHHHHHhhcCCCeEeeccHHHHHHH
Q 018903 80 TRGPGMG--------APL---QVAAVVVRVLSQLWKKPIVAVNHCVAHIEM 119 (349)
Q Consensus 80 ~~gPg~~--------t~l---r~g~~~ak~la~~~~~p~~~v~hh~aHa~s 119 (349)
.. ||.. +.+ ..+..+.+.|...+++|++-.|--.|-|++
T Consensus 81 ~~-pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaala 130 (267)
T 1woq_A 81 TF-PGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLA 130 (267)
T ss_dssp EE-SSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHH
T ss_pred Ec-cceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHH
Confidence 43 3321 111 113345567777789998776665555554
No 87
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=88.23 E-value=0.87 Score=43.07 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=38.8
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcC
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHG 313 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~ 313 (349)
.++.|+|+||.+....+.+.|++.+. +.++..++ --|.++++|++.+.....|
T Consensus 351 ~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 351 QIQEIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp GCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCSS---CTTTHHHHHHHHHHHHHC-
T ss_pred hCCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999763 33444433 3467888898877665543
No 88
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=87.68 E-value=21 Score=34.53 Aligned_cols=80 Identities=9% Similarity=0.053 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEEccchhcHHHHHHHHHHHHhc---------CCEEEEcCCCCCChH-
Q 018903 231 DLCYSLQETLFAMLVEITERAMAHCDK--KDVLIVGGVGCNERLQEMMRTMCSER---------GGRLFATDDRYCVDN- 298 (349)
Q Consensus 231 diA~~~q~~l~~~l~~~~~~~~~~~~~--~~v~lsGGVa~N~~l~~~l~~~l~~~---------g~~v~~~~~~~~~D~- 298 (349)
.+|..+.+..++.+.--+..+.++.+. ..|++.|||-.-..+.+.+++.+.+. +.+|.+.+ +.|+
T Consensus 356 ~ia~~V~~RaA~l~A~~iaai~~~~~~~~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~---~~dgs 432 (457)
T 2yhx_A 356 RXLFLIAAYAFRLVVCXIXAICQKKGYSSGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITP---AIDGX 432 (457)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHTCSSEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEE---CCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEE---CCCch
Confidence 466666666665555555555566666 68999999944444555555444321 23455543 3444
Q ss_pred --HHHHHHHHHHHHHcC
Q 018903 299 --GAMIAYTGLLAFAHG 313 (349)
Q Consensus 299 --G~~iG~a~~~~~~~~ 313 (349)
|++|.++....++..
T Consensus 433 g~GAAl~aa~~~~~~~~ 449 (457)
T 2yhx_A 433 GAASXVIXSIASAXXSX 449 (457)
T ss_dssp THHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHhhhhhh
Confidence 666666666666543
No 89
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=87.62 E-value=2 Score=41.91 Aligned_cols=73 Identities=8% Similarity=0.149 Sum_probs=47.4
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeec-cCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTY-FTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~-~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
+||||.++..+.++|++.+|++++..+... ...+-.|.. ......-.+.+...+++++++.+ .++|.+|+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~-e~d~~~~~~~i~~~i~~~~~~~~--~~~i~~Igis~ 75 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWS-EQDPEQWWQATDRAMKALGDQHS--LQDVKALGIAG 75 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHSC--CTTCCEEEEEE
T ss_pred EEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCE-eECHHHHHHHHHHHHHHHHHhCC--ccceEEEEEcC
Confidence 699999999999999998999998764321 111111221 11223344556667777777643 56899999874
No 90
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=86.08 E-value=1.9 Score=40.41 Aligned_cols=58 Identities=21% Similarity=0.223 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHc-----CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHH
Q 018903 244 LVEITERAMAHC-----DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGL 307 (349)
Q Consensus 244 l~~~~~~~~~~~-----~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~ 307 (349)
+.+.+.+..++. .++.|+|+||.+....+.++|++.+ +.++..++ --|.++++|++.+
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~---~~~v~~~~---~p~~ava~Gaa~~ 378 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKDV---NPDEAVAIGAAVQ 378 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH---SSCCBCSS---CTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh---CCCCCCCc---ChHHHHHHHHHHH
Confidence 344444444443 3578999999999999999999987 34444433 3477888888754
No 91
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=84.96 E-value=5.5 Score=32.00 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=53.4
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCC-
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGP- 83 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gP- 83 (349)
.+||||-+...+++|+.+..+.+..-.. . .+.. ........|..++++- +++.|++.. |
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~A~pl~-t---------i~~~----~~~~~~~~l~~li~e~-----~v~~iVvGl-P~ 63 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGTARPLP-A---------IKAQ----DGTPDWNIIERLLKEW-----QPDEIIVGL-PL 63 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTEEEEEE-E---------EEEE----TTEECHHHHHHHHHHH-----CCSEEEEEE-EE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCEEeeEE-E---------EEcC----CcchHHHHHHHHHHHc-----CCCEEEEec-cc
Confidence 4899999999999999995444322111 1 0010 0011123466666653 588999873 2
Q ss_pred ---CCCch-hHHHHHHHHHHHhhcCCCeEeeccH
Q 018903 84 ---GMGAP-LQVAAVVVRVLSQLWKKPIVAVNHC 113 (349)
Q Consensus 84 ---g~~t~-lr~g~~~ak~la~~~~~p~~~v~hh 113 (349)
|..+. -+....|++.|...+++|+..+...
T Consensus 64 ~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp CTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 32221 2334567888887788999887643
No 92
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=84.82 E-value=2.9 Score=41.05 Aligned_cols=53 Identities=21% Similarity=0.161 Sum_probs=40.0
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCC
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGS 314 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~ 314 (349)
.++.|+|+||.+....+.+++.+.+ +.++..++ --|.++++|++.+.....|.
T Consensus 302 ~i~~VvLvGG~s~~p~v~~~l~~~f---~~~~~~~~---~p~~aVa~Gaa~~a~~l~~~ 354 (509)
T 2v7y_A 302 DIDKVILVGGSTRIPAVQEAIKREL---GKEPHKGV---NPDEVVAIGAAIQGGVIAGE 354 (509)
T ss_dssp GCSEEEEESGGGGCHHHHHHHHHHH---SSCCBCCS---CTTTHHHHHHHHHHHHHHTC
T ss_pred HCcEEEEECCcccChHHHHHHHHHh---CCCcCcCC---CchhhhHhhHHHHHHHhcCC
Confidence 4679999999999999999999987 33433332 34778999988776665554
No 93
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=84.08 E-value=4.5 Score=38.13 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcC-----CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEc---CCCCCChHHHHHHHHHHHHH
Q 018903 244 LVEITERAMAHCD-----KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFAT---DDRYCVDNGAMIAYTGLLAF 310 (349)
Q Consensus 244 l~~~~~~~~~~~~-----~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~---~~~~~~D~G~~iG~a~~~~~ 310 (349)
+.+.+++..+..+ ++.|+|+||.+.-..+.+.+++.+.. ..++..| ....-.|.+++.|++.+...
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~-~~~v~~P~~~~~~~~p~~ava~GAa~~~~~ 400 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPE-STRILAPSTDPSALNPSELQARGAALQASL 400 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCT-TSEEESTTTCTTCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCC-ccccccccccCCCcCHHHHHHHHHHHHhhh
Confidence 4444455544443 57899999999999999999998632 1244444 22345677899998866544
No 94
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=83.94 E-value=5.3 Score=37.33 Aligned_cols=73 Identities=8% Similarity=-0.008 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc-chhcHHHHH--HHHHHHHhc-------------CCEEEEcCCCCC
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKDVLIVGG-VGCNERLQE--MMRTMCSER-------------GGRLFATDDRYC 295 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGG-Va~N~~l~~--~l~~~l~~~-------------g~~v~~~~~~~~ 295 (349)
.|..+-+...+.+...+..+....+.+.|+++|| ++.+..+.. .+++.+.+. ..++.+.. .
T Consensus 280 ~a~~~l~~~~~~L~~~i~~l~~~l~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~---~ 356 (373)
T 2q2r_A 280 NACKAMKKYHEYLMRVGSEASMALLPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQK---K 356 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEEC---S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEe---c
Confidence 4445555555666666666666678888999899 777776666 444444321 23444443 4
Q ss_pred ChHHHHHHHHHH
Q 018903 296 VDNGAMIAYTGL 307 (349)
Q Consensus 296 ~D~G~~iG~a~~ 307 (349)
++++.++|++.+
T Consensus 357 ~~~a~l~GAa~l 368 (373)
T 2q2r_A 357 LLNLNLMGCYRC 368 (373)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCchhHHHHHHH
Confidence 666777888765
No 95
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=83.28 E-value=1.7 Score=39.99 Aligned_cols=44 Identities=9% Similarity=0.144 Sum_probs=34.0
Q ss_pred CeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHH
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGL 307 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~ 307 (349)
+.|+|+||.+.-..+.++|++.+ +.++.+++ --|.++++|++-+
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~---~~~v~~~~---~p~~ava~Gaa~~ 322 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKET---GISVIRSE---EPLTAVAKGAGMV 322 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHH---SSCEEECS---STTTHHHHHHHHG
T ss_pred CcEEEECccccchHHHHHHHHHH---CCCccccC---ChHHHHHHHHHHH
Confidence 57999999999999999999987 45666654 2366777777644
No 96
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=82.54 E-value=3 Score=42.02 Aligned_cols=67 Identities=19% Similarity=0.180 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHc-----CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCCC
Q 018903 244 LVEITERAMAHC-----DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSST 316 (349)
Q Consensus 244 l~~~~~~~~~~~-----~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~~ 316 (349)
+...++++++.. .++.|+|+||.+....+.+.+.+.+ +.++..+ .--|.+++.|++.+.....|...
T Consensus 316 i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f---g~~~~~~---~nPdeaVA~GAai~a~~l~~~~~ 387 (605)
T 4b9q_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKD---VNPDEAVAIGAAVQGGVLTGDVK 387 (605)
T ss_dssp TTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH---TSCCCSS---SCTTTHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh---ccCcCCC---cChhHHHHHhHHHHHHHhcCCCC
Confidence 344444444443 3579999999999999999999987 3443332 23577899999887777666543
No 97
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=81.09 E-value=4.2 Score=36.60 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=54.1
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecCCCC
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGM 85 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~ 85 (349)
+||||.+...+.++|++ +|+++...+.........+. . .-.+.+..+++++++ ..++..|++. -||.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~~~~~~~--~----~~~~~i~~~i~~~~~-----~~~i~~igig-~pG~ 68 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGAVIKRLGTKGINPFFQSE--E----EIQQKLTASLLPQLP-----EGKFNAVYFY-GAGC 68 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSSEEEEEEECCCCTTTSCS--T----TTTTTTTC------------------CEEE-CTTC
T ss_pred EEEEEeccccEEEEEEc-CCeEEEEEECCCCCcccCCH--H----HHHHHHHHHHHHhcC-----cccccEEEEE-cCCC
Confidence 79999999999999999 99998865431100000010 1 111223334444432 2467777765 3664
Q ss_pred CchhHHHHHHHHHHHhhcC--CCeEeeccHHHHHHHhhhhcCCCCCeEEEEeCCee
Q 018903 86 GAPLQVAAVVVRVLSQLWK--KPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNT 139 (349)
Q Consensus 86 ~t~lr~g~~~ak~la~~~~--~p~~~v~hh~aHa~sa~~~s~~~~p~~l~i~gg~~ 139 (349)
- -..+..+.+.|...++ .|+.-.|.-.+-+++.+ +. ...++++.|...
T Consensus 69 ~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g~-~~~v~v~~GTGi 118 (291)
T 1zxo_A 69 T--PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---GQ-KAGIACILGTGS 118 (291)
T ss_dssp C--TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---TT-SCBEEEEESSSE
T ss_pred C--HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---CC-CCcEEEEeCCCh
Confidence 2 1112345556777777 48766666655544432 22 234444555444
No 98
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=78.44 E-value=47 Score=31.52 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=24.7
Q ss_pred CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEE
Q 018903 257 KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFA 289 (349)
Q Consensus 257 ~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~ 289 (349)
.+.|+|+||.++=..+.+.+.+.+ +.++.+
T Consensus 329 ~~~IvLtGG~s~lpgl~e~~~~~~---g~~vri 358 (419)
T 4a2a_A 329 PGGVVLTGGGAKIPRINELATEVF---KSPVRT 358 (419)
T ss_dssp TTCEEEESGGGGSTTHHHHHHHHH---TSCEEE
T ss_pred CCEEEEECchhchhhHHHHHHHHH---CCCeEE
Confidence 357999999999999999999987 455544
No 99
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=74.32 E-value=7.4 Score=35.39 Aligned_cols=43 Identities=9% Similarity=0.057 Sum_probs=26.3
Q ss_pred eEEEEeCCeeEEEEEeCCcEEEE--eecccchhhHHHHHHHhHcC
Q 018903 130 VVLYVSGGNTQVIAYSEGRYRIF--GETIDIAVGNCLDRFARVLT 172 (349)
Q Consensus 130 ~~l~i~gg~~~~~~~~~g~~~~~--~~~~~~S~Gr~~Dava~lLG 172 (349)
+++++.||.+.+..+.+|.+.+. ....+-....+.+.++..|.
T Consensus 167 ~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~ 211 (320)
T 2zgy_A 167 LIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALS 211 (320)
T ss_dssp EEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHH
Confidence 46666667666555556543222 33445566678888888883
No 100
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=74.03 E-value=5.5 Score=37.85 Aligned_cols=50 Identities=6% Similarity=-0.011 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHcCCCeEEEEccchhc-HHHHHHHHHHHHhcCC
Q 018903 236 LQETLFAMLVEITERA-MAHCDKKDVLIVGGVGCN-ERLQEMMRTMCSERGG 285 (349)
Q Consensus 236 ~q~~l~~~l~~~~~~~-~~~~~~~~v~lsGGVa~N-~~l~~~l~~~l~~~g~ 285 (349)
..+.+...+.+.+... ..-.|++.|+++||+.-| ..+++++.+.+...|+
T Consensus 305 A~d~f~yri~k~IGa~aa~L~GvDaIVFTgGIGEns~~vR~~i~~~l~~lGi 356 (404)
T 4h0o_A 305 AFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAICDKMKFLGI 356 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHHHCHHHHHHHHHHTGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCccccCcHHHHHHHHhhhhhcCe
Confidence 3333444444433322 223579999999999988 8888999888776554
No 101
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=73.71 E-value=5.4 Score=39.58 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=40.0
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCC
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGS 314 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~ 314 (349)
.++.|+|+||.+....+.+.+.+.+. +.++..+. --|.+++.|++.+.....|.
T Consensus 330 ~i~~VvLvGG~srip~v~~~l~~~f~--~~~v~~~~---np~~aVA~Gaa~~a~~l~~~ 383 (554)
T 1yuw_A 330 QIHDIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILSGD 383 (554)
T ss_dssp GCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHHHHHHTTSC
T ss_pred hCcEEEEECCcccChHHHHHHHHHcC--CCccccCC---CchhHHHHHHHHHHHHhcCC
Confidence 46799999999999999999998763 23333332 34778999998777666563
No 102
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=72.31 E-value=39 Score=35.06 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=57.7
Q ss_pred CcEEEEEecCC-cceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 3 RMIALGFEGSA-NKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 3 ~m~iLgIdts~-~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
.-.+||+|-+. .-+.+|+++.+|+++..... +|... .+..+.....+..++++. .++.||++.
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i----------y~~~~-~~~~~~~~~~l~~li~~~-----~~~~IaIGn 391 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV----------YPHAP-KNQWDQTLAVLAALCAKH-----QVELIAIGN 391 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE----------CCSGG-GCCHHHHHHHHHHHHHHH-----TCCEEEEES
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE----------ecCCc-hhHHHHHHHHHHHHHHHc-----CCCEEEECC
Confidence 34689999875 56789999989999986542 12111 111122233455555443 589999987
Q ss_pred CCCCCchhHHHHHHHHHHHhh---cCCCeEeeccHHHHHHHh
Q 018903 82 GPGMGAPLQVAAVVVRVLSQL---WKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 82 gPg~~t~lr~g~~~ak~la~~---~~~p~~~v~hh~aHa~sa 120 (349)
|. .-|-...+...+... ..+|.+.++.--|-.+++
T Consensus 392 gt----asret~~~v~~l~~~~~~~~i~~v~v~e~gArvy~a 429 (785)
T 3bzc_A 392 GT----ASRETDKLAGELIKKYPGMKLTKIMVSEAGASVYSA 429 (785)
T ss_dssp ST----THHHHHHHHHHHHHHCGGGCCEEEEECCHHHHHHHH
T ss_pred Cc----cCHHHHHHHHHHHHhcccCCCCEEEEcCCcCCHHHH
Confidence 64 334334444444332 357777777766665554
No 103
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=72.01 E-value=32 Score=31.27 Aligned_cols=96 Identities=9% Similarity=-0.012 Sum_probs=61.6
Q ss_pred cEEEEEecCCcceeEEEEE-cCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 4 MIALGFEGSANKIGVGVVT-LDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~-~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.++||||-+...+.++|++ .+|+++...+. |.. ....+...+++++++.+ .++..|++..
T Consensus 14 ~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~-----------~~~----~~~~~~~~i~~~~~~~~---~~i~gigi~~- 74 (332)
T 1sz2_A 14 KYALVGDVGGTNARLALCDIASGEISQAKTY-----------SGL----DYPSLEAVIRVYLEEHK---VEVKDGCIAI- 74 (332)
T ss_dssp CEEEEEEEETTEEEEEEEETTTCCEEEEEEE-----------EGG----GCSCHHHHHHHHHHHSC---CCCCEEEEEE-
T ss_pred CEEEEEEechhheEEEEEECCCCcEEEEEEe-----------cCC----CcCCHHHHHHHHHHhcC---CCccEEEEEE-
Confidence 3689999999999999998 47988764332 111 11245567888888765 3678887664
Q ss_pred CCCCc---------hhHHHHHHHHHHHhhcCCC-eEeeccHHHHHHHhh
Q 018903 83 PGMGA---------PLQVAAVVVRVLSQLWKKP-IVAVNHCVAHIEMGR 121 (349)
Q Consensus 83 Pg~~t---------~lr~g~~~ak~la~~~~~p-~~~v~hh~aHa~sa~ 121 (349)
||... +.+ .. .+.|...+++| ++-.|--.|.|++-+
T Consensus 75 pG~vd~~~~~~~nl~w~--~~-~~~l~~~~~~p~V~v~NDanaaalgE~ 120 (332)
T 1sz2_A 75 ACPITGDWVAMTNHTWA--FS-IAEMKKNLGFSHLEIINDFTAVSMAIP 120 (332)
T ss_dssp SSCCCSSEECCSSSCCC--EE-HHHHHHHHTCSEEEEEEHHHHHHHHGG
T ss_pred eCceeCCEEeeeCCCCc--CC-HHHHHHHhCCCcEEEEeCHhHHhcccc
Confidence 33221 111 12 24677778898 777777666666543
No 104
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=68.83 E-value=22 Score=33.85 Aligned_cols=53 Identities=17% Similarity=0.200 Sum_probs=41.7
Q ss_pred cCCCeEEEEccch-hcHHHHHHHHHHHHhcCC-----------------------EEEEcCCCCCChHHHHHHHHHHHHH
Q 018903 255 CDKKDVLIVGGVG-CNERLQEMMRTMCSERGG-----------------------RLFATDDRYCVDNGAMIAYTGLLAF 310 (349)
Q Consensus 255 ~~~~~v~lsGGVa-~N~~l~~~l~~~l~~~g~-----------------------~v~~~~~~~~~D~G~~iG~a~~~~~ 310 (349)
-+++.|+++||++ ....+++++.+.+...|+ +|++-| +|.=.+|+.-.+..+
T Consensus 321 ggvDaiVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~Is~~~s~v~V~ViP----t~Eel~IA~~~~~~l 396 (408)
T 1g99_A 321 NGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNKIRGQEIDISTPDAKVRVFVIP----TNEELAIARETKEIV 396 (408)
T ss_dssp TSCSEEEEEHHHHHHCHHHHHHHHTTCGGGTCCBCTTGGGCCSSCEECBCTTCSSEEEECC----CCHHHHHHHHHHHHH
T ss_pred CCCCEEEECccccccCHHHHHHHHhhhhhhCccccHhhhhccCccceecCCCCCceEEEEC----ChHHHHHHHHHHHHH
Confidence 5699999999999 778889999888776662 455543 677899999888776
Q ss_pred H
Q 018903 311 A 311 (349)
Q Consensus 311 ~ 311 (349)
.
T Consensus 397 ~ 397 (408)
T 1g99_A 397 E 397 (408)
T ss_dssp H
T ss_pred h
Confidence 5
No 105
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=68.39 E-value=4.7 Score=40.54 Aligned_cols=53 Identities=21% Similarity=0.196 Sum_probs=39.4
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCC
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGS 314 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~ 314 (349)
.++.|+|+||.+.-..+.+.+.+.+ +.++..+ .--|.++++|++.+.....|.
T Consensus 333 ~i~~VvLvGG~srip~v~~~l~~~f---g~~~~~~---~npd~aVA~GAa~~a~~l~~~ 385 (605)
T 2kho_A 333 DIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKD---VNPDEAVAIGAAVQGGVLTGD 385 (605)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHH---SSCCBCS---SCTTTHHHHHHHHHHTTTTTS
T ss_pred hCceEEEECCcccChHHHHHHHHhc---CCCcCcC---CCcchHHHHHHHHHHHHhcCC
Confidence 4679999999999999999999987 3333332 234778999988766555453
No 106
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=67.58 E-value=20 Score=34.60 Aligned_cols=73 Identities=11% Similarity=0.051 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEEccchh-cHHHHHHHHHHHHhc---CCEEEEcCCCCCChHHHHHHH
Q 018903 231 DLCYSLQETLFAMLVEITERAMAHCDKK--DVLIVGGVGC-NERLQEMMRTMCSER---GGRLFATDDRYCVDNGAMIAY 304 (349)
Q Consensus 231 diA~~~q~~l~~~l~~~~~~~~~~~~~~--~v~lsGGVa~-N~~l~~~l~~~l~~~---g~~v~~~~~~~~~D~G~~iG~ 304 (349)
.+|..+.+..++.+...+..+.++.+.+ .|++.|||+. ...+.+.+++.+.+. ..++.+.. +.|+ ..+|+
T Consensus 365 ~va~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l---~~dg-s~iGA 440 (451)
T 1bdg_A 365 YACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRL---SEDG-SGKGA 440 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEE---CTTH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEE---CCCc-cHHHH
Confidence 4677777777777776666677777877 7788899974 345666777766543 23444442 4554 44566
Q ss_pred HHH
Q 018903 305 TGL 307 (349)
Q Consensus 305 a~~ 307 (349)
|..
T Consensus 441 All 443 (451)
T 1bdg_A 441 AAI 443 (451)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 107
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=66.98 E-value=6 Score=37.40 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=26.5
Q ss_pred cCCCeEEEEccchhcHH-HHHHHHHHHHhcCCE
Q 018903 255 CDKKDVLIVGGVGCNER-LQEMMRTMCSERGGR 286 (349)
Q Consensus 255 ~~~~~v~lsGGVa~N~~-l~~~l~~~l~~~g~~ 286 (349)
.+++.|+++||++-|+. +++++.+.+...|++
T Consensus 312 ~gvDaIVFTgGIgEns~~iR~~i~~~l~~lGi~ 344 (384)
T 3khy_A 312 NKLDALVFTGGIGENAANIRKNIISKLANLGFM 344 (384)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHHTGGGTCC
T ss_pred CCCCEEEECCccccCcHHHHHHHHhhcccccEE
Confidence 37899999999997754 899999888776664
No 108
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=65.92 E-value=13 Score=36.26 Aligned_cols=56 Identities=4% Similarity=0.020 Sum_probs=38.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHHHH-HHhcCCEEEEcC
Q 018903 230 ADLCYSLQET--LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTM-CSERGGRLFATD 291 (349)
Q Consensus 230 ~diA~~~q~~--l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~~~-l~~~g~~v~~~~ 291 (349)
.++++++.+. ++-.+.+.+... + ..+.|.++||.+.|..+++.+... + |.+|.++.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~-~--~~~~i~~~GG~a~s~~w~Qi~ADv~~---g~pV~~~~ 420 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLI-G--STGRILVEGRFAEADVFVRALASLRP---DCAVYTAN 420 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHT-T--CCSEEEEESGGGGCHHHHHHHHHHST---TSEEEEES
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHh-c--CCCeEEEeCCcccCHHHHHHHhhhcC---CCeEEEcC
Confidence 4565555543 333333333322 1 237899999999999999999987 6 68998886
No 109
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=65.88 E-value=80 Score=28.81 Aligned_cols=31 Identities=16% Similarity=0.160 Sum_probs=26.5
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEE
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFA 289 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~ 289 (349)
.++.|+|+||.+....+.+.+.+.+ +.++.+
T Consensus 306 ~~~~IvL~GG~s~~p~l~~~l~~~l---~~~v~~ 336 (377)
T 2ych_A 306 SPEVGYLLGGGSKLRGLASLLTDTL---GVNLEP 336 (377)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHH---TSEEEE
T ss_pred CcCEEEEECccccchhHHHHHHHHh---CCCeEe
Confidence 4789999999999999999999987 466555
No 110
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=63.61 E-value=1.5 Score=39.59 Aligned_cols=55 Identities=16% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCCCCCcc
Q 018903 256 DKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSSTPLEE 320 (349)
Q Consensus 256 ~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~~~~~~ 320 (349)
+...|++.|||+.+ +.+.+++.+.+...++.. +.|.| ++|++.+ .......+||+
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~-----~~~a~-~~GAa~l--a~~~~~~~~~~ 286 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGK-----ILQSP-MEGLIQY--HSQLSFHPLEH 286 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEE-----ECSCT-HHHHHTT--SSSCC------
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEee-----cCCCH-HHHHHHH--HHHHhcCcchh
Confidence 56789999999988 778888877652233332 23444 3566543 12233355654
No 111
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=62.47 E-value=19 Score=36.32 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=52.9
Q ss_pred CcEEEEEecCCcceeEEEEE-cCCeEEEeeeeeccCCCCC-CCcchhhhhhHHh---------------hHHHHHHHHHH
Q 018903 3 RMIALGFEGSANKIGVGVVT-LDGSILSNPRHTYFTPPGQ-GFLPRETAQHHLE---------------HVLPLVKSALK 65 (349)
Q Consensus 3 ~m~iLgIdts~~~~sval~~-~dg~i~~~~~~~~~~~~~~-g~~p~~~~~~h~~---------------~l~~~i~~~L~ 65 (349)
..+-|+||-++.+..+.|+| .+|++++.......+..|+ .+ .+|..+.. .+-.+|+++++
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DV---isRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~ 281 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDV---ISRIIYVDENPDGAEKLRKAVLSTINELIFQLCK 281 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSH---HHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHH---HHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34668999999999999998 5799998765443333443 22 22222221 23356777778
Q ss_pred HcCCCCCCCCEEEEecCC
Q 018903 66 TAGITPDEIDCLCYTRGP 83 (349)
Q Consensus 66 ~~~i~~~did~Ia~~~gP 83 (349)
+++++.++|..+++...|
T Consensus 282 ~~~i~~~~I~~~~v~GNt 299 (631)
T 3zyy_X 282 EHGVEKKEIMAAVVAGNT 299 (631)
T ss_dssp HHTCCGGGEEEEEEEECH
T ss_pred HcCCCHHHeeEEEEEccH
Confidence 889999999999887654
No 112
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=61.68 E-value=38 Score=30.74 Aligned_cols=73 Identities=12% Similarity=0.165 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEccchhc-HH-HH-HHHHHHHHh--------cCCEEEEcCCCCCChHH
Q 018903 232 LCYSLQETLFAMLVEITERAMAHCDKKD-VLIVGGVGCN-ER-LQ-EMMRTMCSE--------RGGRLFATDDRYCVDNG 299 (349)
Q Consensus 232 iA~~~q~~l~~~l~~~~~~~~~~~~~~~-v~lsGGVa~N-~~-l~-~~l~~~l~~--------~g~~v~~~~~~~~~D~G 299 (349)
.|..+-+...+.+...+..+....+.+. |++.||++.+ .. +. ..+++.+.+ ...++.+. .+|.+
T Consensus 240 ~A~~~~~~~~~~Lg~~i~~l~~~l~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~a 315 (332)
T 1sz2_A 240 DCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLI----VHDNP 315 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEE----CCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEE----ECCch
Confidence 3444444445555555555556667877 9999999864 33 22 234444432 12344432 26677
Q ss_pred HHHHHHHHH
Q 018903 300 AMIAYTGLL 308 (349)
Q Consensus 300 ~~iG~a~~~ 308 (349)
..+|++.+.
T Consensus 316 ~l~GAa~l~ 324 (332)
T 1sz2_A 316 GLLGSGAHL 324 (332)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 778887654
No 113
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=60.31 E-value=20 Score=28.88 Aligned_cols=50 Identities=24% Similarity=0.380 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
.+...|+++|++.|+.+.+|+.|+.-.-----.+ -..++..+++|+..++
T Consensus 26 ~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~g-------L~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 26 HLRALLERTLGEHGRSLAELDALASIDGKRDEPG-------LRQLATLLERPVHFLA 75 (145)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHH-------HHHHHHHHTSCEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHcceEechHHhCCCHH-------HHHHHHHhCCCcEEeC
Confidence 4567899999999999999999985431111111 1356778889988875
No 114
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=59.18 E-value=12 Score=34.72 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=33.3
Q ss_pred CCeEEEEccchhcHHHHHHHHHHHHhc-----CCEEEEcCCCCCChHHHHHHHHHH
Q 018903 257 KKDVLIVGGVGCNERLQEMMRTMCSER-----GGRLFATDDRYCVDNGAMIAYTGL 307 (349)
Q Consensus 257 ~~~v~lsGGVa~N~~l~~~l~~~l~~~-----g~~v~~~~~~~~~D~G~~iG~a~~ 307 (349)
.++|+|+||.++=..+.++|.+.+... .++++.++. -+.++.+|.+-+
T Consensus 294 ~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~---p~~~~w~G~si~ 346 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE---RKYSVWIGGSIL 346 (375)
T ss_dssp HTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTT---TTSHHHHHHHHH
T ss_pred HhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCC---CCccEEcchHHh
Confidence 367999999999999999999988642 145554432 244566665544
No 115
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=58.65 E-value=39 Score=36.13 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=54.2
Q ss_pred cEEEEEecCCc-----ceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 4 MIALGFEGSAN-----KIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 4 m~iLgIdts~~-----~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
..|||||.+.. -+.+|+++.+|+++.....-. +. +|...+. .....+..++++. .++.||
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i~~-~~-----~~~~~~~----~~~~~l~~li~~~-----~~~~Ia 583 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVD-NP-----FDKTNPE----KFEDTLDNIIQSC-----QPNAIG 583 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEECS-CT-----TCSSCCH----HHHHHHHHHHHHH-----CCSEEE
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEEcC-CC-----CChhhHH----HHHHHHHHHHHHc-----CCcEEE
Confidence 36899999875 367899998999998664310 00 0111111 1123444444443 689999
Q ss_pred EecCCCCCchhHHHHHHHHHHHh-------hcCCCeEeeccHHHHHHHh
Q 018903 79 YTRGPGMGAPLQVAAVVVRVLSQ-------LWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 79 ~~~gPg~~t~lr~g~~~ak~la~-------~~~~p~~~v~hh~aHa~sa 120 (349)
++. ++--+-+.-..+.+.+.. ..+++++.|+.--|-.+++
T Consensus 584 IGn--~s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYsa 630 (1030)
T 3psf_A 584 ING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQN 630 (1030)
T ss_dssp ECC--SSTHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHHT
T ss_pred ECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHHh
Confidence 974 322121211112222221 1347888899877766654
No 116
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=55.15 E-value=17 Score=31.88 Aligned_cols=62 Identities=10% Similarity=0.108 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCCeEEEEccchhc-HHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcC
Q 018903 244 LVEITERAMAHCDKKDVLIVGGVGCN-ERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHG 313 (349)
Q Consensus 244 l~~~~~~~~~~~~~~~v~lsGGVa~N-~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~ 313 (349)
+...+..+..-.+.+.|++.||++.+ ..+.+.++ ...++.... .++.+..+|++.+...+.+
T Consensus 202 l~~~l~~l~~~ldP~~IvlgG~i~~~~~~~~~~~~-----~~~~i~~s~---l~~~a~~~GAa~l~~~~~~ 264 (267)
T 1woq_A 202 LQRYFSHVEFLFSPELFIVGGGISKRADEYLPNLR-----LRTPIVPAV---LRNEAGIVGAAIEIALQHK 264 (267)
T ss_dssp HHHHHHHHHHHHCCSEEEEESGGGGGGGGTGGGCC-----CSSCEEECS---CSTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCCEEEEeChhhcccHHHHHhhc-----cCceEEECC---cCCcHHHHHHHHHHHhccc
Confidence 33334444455688999999999865 33333332 123444443 4667777898877655543
No 117
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=53.44 E-value=20 Score=34.42 Aligned_cols=53 Identities=11% Similarity=0.169 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-c------CCCeEEEEccch-hcHHHHHHHHHHHHhcCC
Q 018903 233 CYSLQETLFAMLVEITERAMAH-C------DKKDVLIVGGVG-CNERLQEMMRTMCSERGG 285 (349)
Q Consensus 233 A~~~q~~l~~~l~~~~~~~~~~-~------~~~~v~lsGGVa-~N~~l~~~l~~~l~~~g~ 285 (349)
|.-.-+.+...+.+-+...... . +++.|+++||+. ....+++++.+.+...|+
T Consensus 322 A~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l~~lgi 382 (438)
T 4h0p_A 322 AKLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKLAWLGA 382 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHTGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhHhhcCe
Confidence 4444455555555554443333 2 699999999998 557788888888776554
No 118
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=51.66 E-value=26 Score=31.91 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
..++..++++|+++|++++|||.++.
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~ 249 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVP 249 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 34667899999999999999999986
No 119
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=51.58 E-value=87 Score=29.04 Aligned_cols=44 Identities=20% Similarity=0.215 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCCe
Q 018903 58 PLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPI 107 (349)
Q Consensus 58 ~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~ 107 (349)
..|.+.|++.|++++|+|.|+-. .+ -++|..+.+.|.+..+.|+
T Consensus 211 ~ti~~~l~d~g~~~~d~D~ivtg-dL-----~q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 211 DTIKQHLEDLGRTPDDYDLILTG-DL-----SGVGSPILKDLLKEEGINV 254 (347)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEE-SC-----HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCCCHHHcCEEecC-Ch-----HHHHHHHHHHHHHHcCCCh
Confidence 56789999999999999999832 22 2577778888888888885
No 120
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=51.35 E-value=60 Score=35.40 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=54.7
Q ss_pred cEEEEEecCCc-----ceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEE
Q 018903 4 MIALGFEGSAN-----KIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLC 78 (349)
Q Consensus 4 m~iLgIdts~~-----~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia 78 (349)
..|||||.+.. -+.+|+++.+|+++.....-. ..+ |...+.+ ....+..++++. .++.||
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i~~-~~~-----~~~~~~~----a~~~l~~li~~~-----~~~vIa 580 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVD-NPF-----DKTNPEK----FEDTLDNIIQSC-----QPNAIG 580 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEECS-CTT-----CSSCSHH----HHHHHHHHHHHH-----CCSEEE
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEEcC-CCC-----ChhhHHH----HHHHHHHHHHHc-----CCcEEE
Confidence 36899998875 367899998999998664310 000 1111111 113344444443 689999
Q ss_pred EecCCCCCchhHHHHHHHHHHHh-----------hcCCCeEeeccHHHHHHHh
Q 018903 79 YTRGPGMGAPLQVAAVVVRVLSQ-----------LWKKPIVAVNHCVAHIEMG 120 (349)
Q Consensus 79 ~~~gPg~~t~lr~g~~~ak~la~-----------~~~~p~~~v~hh~aHa~sa 120 (349)
++. ++ |-...+.+.+.. ..+++++.|+.--|-.+++
T Consensus 581 IGn--~s----ret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYsa 627 (1219)
T 3psi_A 581 ING--PN----PKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQN 627 (1219)
T ss_dssp ECC--SS----THHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHHT
T ss_pred ECC--CC----HHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHhc
Confidence 975 22 333333333322 1347888888877766654
No 121
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=51.17 E-value=47 Score=33.04 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=44.3
Q ss_pred EEEEEecCCcceeEEEEEc--CCeEEE--eeeeeccCCCCCCCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 5 IALGFEGSANKIGVGVVTL--DGSILS--NPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~--dg~i~~--~~~~~~~~~~~~g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
+|.|||.++.++-+||.+. +|++-+ .... +.+|+.- ..+....+..+++++|+++|++.+|+|.|-.
T Consensus 3 ~i~gvdign~tte~~la~~~~~~~~~f~~s~~~-----~ttg~kg---t~~n~~g~~~~l~~~~~~~~~~~~~~~lir~ 73 (610)
T 2d0o_A 3 YIAGIDIGNSSTEVALATLDEAGALTITHSALA-----ETTGIKG---TLRNVFGIQEALALVARGAGIAVSDISLIRI 73 (610)
T ss_dssp EEEEEEECSSEEEEEEEEECTTCCEEEEEEEEE-----ECCSSTT---STTHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred EEEEEecCCcchheeeeeecCCCceEEeecccc-----ccCCccC---cHHHHHHHHHHHHHHHHHcCCChhhceeeee
Confidence 6899999998888887552 364433 2211 1123321 1233445667899999999999999999653
No 122
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=50.76 E-value=25 Score=32.02 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
..++..++++|+++|++++|||.++.
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~ 259 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIP 259 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 44667899999999999999999975
No 123
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=50.47 E-value=24 Score=32.80 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
..++..++++|+++|++++|||.++. |++ +.|+-..+++.|
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~--Hq~---n~~i~~~~~~~l 294 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVIC--HQP---NLRILDAVQEQL 294 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE--CCS---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE--CCC---CHHHHHHHHHHh
Confidence 34667899999999999999999986 443 244444444443
No 124
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=50.34 E-value=90 Score=27.76 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=23.0
Q ss_pred CCCcEEEEEecCCcceeEEEEEcCCeEEEeee
Q 018903 1 MKRMIALGFEGSANKIGVGVVTLDGSILSNPR 32 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~dg~i~~~~~ 32 (349)
|..| +|.||.++..+..++++.+++++...+
T Consensus 21 ~~~M-~L~IDiGNT~ik~g~~~~~~~~~~~~r 51 (271)
T 2f9w_A 21 MASM-ILELDCGNSLIKWRVIEGAARSVAGGL 51 (271)
T ss_dssp --CE-EEEEEECSSCEEEEEEETTTEEEEEEE
T ss_pred ccCc-EEEEEeCCCeeEEEEEeCCCEEEEEEE
Confidence 4445 799999999999999983457776544
No 125
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=50.00 E-value=17 Score=33.37 Aligned_cols=44 Identities=16% Similarity=0.346 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCC
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKP 106 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p 106 (349)
..++..++++|+++|++++|||.++. ||+. .|+- +.+++.+++|
T Consensus 249 ~~~~~~i~~~L~~~gl~~~did~~v~--Hq~~---~~i~----~~~~~~Lgl~ 292 (350)
T 4ewp_A 249 WSMAKVAREALDAAGVEPEDLAAFIP--HQAN---MRII----DEFAKQLKLP 292 (350)
T ss_dssp HTHHHHHHHHHHHHTCCGGGEEEEEE--CCSC---HHHH----HHHHHHTTCC
T ss_pred HhhhHHHHHHHHhhcCChhHhceEEe--cCCC---HHHH----HHHHHHcCcC
Confidence 35678999999999999999999985 5543 3333 3444455554
No 126
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=48.86 E-value=7.9 Score=32.98 Aligned_cols=86 Identities=13% Similarity=0.121 Sum_probs=39.4
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHcCCC-CCCcccccccCccCcc
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSS-TPLEESTFTQRFRTDE 331 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~~~~-~~~~~~~~~~~~~~~~ 331 (349)
+..++++|+++|=..-.|++...+.. .++|+++++... .|.+---..-.+++..++.+-. .+.++ +--.|..++
T Consensus 116 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D-a~as~~~~~h~~al~~l~~~a~v~tt~~--vl~~l~~~~ 190 (204)
T 3hb7_A 116 KEEGIDTVVLTGVWTNVCVRSTATDA--LANAYKVITLSD-GTASKTEEMHEYGLNDLSIFTKVMTVDQ--YIQAWENDE 190 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE-EEECSSHHHHHHHHHHHHHHSEEECHHH--HHHHHHC--
T ss_pred HHCCCCEEEEEeecccHHHHHHHHHH--HHCCCEEEEech-hccCCCHHHHHHHHHHHHhCCEEeeHHH--HHHHHhccC
Confidence 34689999999988888888777643 457999888654 2222222222333333332222 22222 222333333
Q ss_pred ccccccccccchhc
Q 018903 332 VHAVWREKEDSACK 345 (349)
Q Consensus 332 ~~~~~~~~~~~~~~ 345 (349)
++|.+.+|+.-|
T Consensus 191 --~~~~~~~~~~~~ 202 (204)
T 3hb7_A 191 --DPWVGGGDAQNK 202 (204)
T ss_dssp --------------
T ss_pred --CCCcCCcccccc
Confidence 577777776543
No 127
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=48.44 E-value=25 Score=32.41 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
..++..++++|+++|++++|||.++.-
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~H 270 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLFH 270 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 456678999999999999999999863
No 128
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=48.42 E-value=24 Score=32.80 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
..++..++++|+++|++++|||.++. +++ +.|+-..+++.|
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~--Hq~---n~~i~~~~~~~L 306 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVL--HQA---NRFMLDALRKKM 306 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEE--CCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE--cCC---CHHHHHHHHHHh
Confidence 44567899999999999999999985 443 344444444443
No 129
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=44.80 E-value=28 Score=31.94 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
.++..++++|+++|++++|||.++. |++ +.|+-..+++.|
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~--Hq~---~~~i~~~~~~~l 286 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVI--HQV---SRPHTAAFVKSF 286 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEE--CCS---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe--CCC---CHHHHHHHHHHc
Confidence 4557889999999999999999986 553 344444444433
No 130
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=42.74 E-value=37 Score=31.74 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
+-...+++.+|+++|++++|||.|.+..
T Consensus 31 ~L~~~a~~~Al~~agi~~~~Id~v~~g~ 58 (395)
T 4e1l_A 31 QLGTIAVKEAISRVGLNLSEIDEVIIGN 58 (395)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3445789999999999999999998764
No 131
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=42.49 E-value=29 Score=31.46 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
..+...++.+|+++|++++|||.|.. |+ ++.++.-.+++.|
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~--H~---~~~~~~d~~~~~l 264 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVP--HQ---ANTRILAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEE--CC---CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE--cC---CCHHHHHHHHHHc
Confidence 45667899999999999999999986 33 3455555555544
No 132
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=42.49 E-value=31 Score=36.40 Aligned_cols=58 Identities=9% Similarity=0.154 Sum_probs=36.6
Q ss_pred cEEEEEecCCcceeEEEEEcCCe----E-EEeeeeeccCCCCCCCcchh----hhhhHHhhHHHHHHHHHHHcCCC
Q 018903 4 MIALGFEGSANKIGVGVVTLDGS----I-LSNPRHTYFTPPGQGFLPRE----TAQHHLEHVLPLVKSALKTAGIT 70 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~dg~----i-~~~~~~~~~~~~~~g~~p~~----~~~~h~~~l~~~i~~~L~~~~i~ 70 (349)
..+||||-+.....+++++.+|+ + +...++. .|.. ....-...+...|++.+++.++.
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~---------ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~ 144 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYD---------TPENIVHGSGSQLFDHVAECLGDFMEKRKIK 144 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEEC---------CCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEE---------CCcccccCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 45799999999999999986665 4 3322221 1221 12334556667777777776554
No 133
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=42.42 E-value=36 Score=31.88 Aligned_cols=28 Identities=39% Similarity=0.363 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
+-...+++.+|+++|++++|||.|.+..
T Consensus 33 ~L~~~A~~~AL~~agl~~~dId~vi~g~ 60 (396)
T 4dd5_A 33 ELGVTAAKEAIKRANITPDMIDESLLGG 60 (396)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3445789999999999999999998764
No 134
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=42.35 E-value=29 Score=31.52 Aligned_cols=41 Identities=29% Similarity=0.456 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
..+...++.+|+++|++++|||.|..- + ++.++.-.+++.|
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H--~---~~~~~~d~i~~~l 271 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPH--Q---ANLRIIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC--C---SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC--C---CCHHHHHHHHHHh
Confidence 456678999999999999999999863 2 3456665555544
No 135
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=42.05 E-value=36 Score=31.93 Aligned_cols=25 Identities=12% Similarity=0.256 Sum_probs=21.2
Q ss_pred CeEEEEccchhcHHHHHHHHHHHHh
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCSE 282 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~~ 282 (349)
++|+|+||.++=..+.++|.+.+..
T Consensus 317 ~~IvL~GG~s~~pg~~~rl~~el~~ 341 (418)
T 1k8k_A 317 KNIVLSGGSTMFRDFGRRLQRDLKR 341 (418)
T ss_dssp HCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred hceEEeCCccccccHHHHHHHHHHH
Confidence 4799999999999888888877654
No 136
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=40.69 E-value=48 Score=30.80 Aligned_cols=49 Identities=18% Similarity=0.161 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEec-CCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTR-GPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~-gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
-...+++.+|+++|++++|||.|.+.. -|...+ +. .++..+++|.+.|+
T Consensus 58 La~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~----A~----~va~~LgipafdV~ 107 (347)
T 3lma_A 58 LMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVT----AN----YVARHLKIPFLCLF 107 (347)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEEEESSSSSTT----HH----HHHHHHCCCEEEBC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchhH----HH----HHHHHhCCCEEEec
Confidence 345689999999999999999998754 352222 22 23334478988875
No 137
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=39.86 E-value=33 Score=30.74 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHH
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVR 97 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak 97 (349)
.+...++.+|+++|++++|||.|..- + ++.++.-.+.+
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H--~---~~~~~~d~i~~ 256 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPH--Q---ANLRIISATAK 256 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEC--C---SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc--C---CCHHHHHHHHH
Confidence 46678999999999999999999763 2 34455444443
No 138
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=38.85 E-value=41 Score=29.99 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
.+..+++.+|+++|++++|||.|..- + ++.++...+.+.|
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H-~----~~~~~~d~~~~~l 252 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPH-Q----ANIRIMESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEEC-C----SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc-C----CCHHHHHHHHHHh
Confidence 56678999999999999999999864 2 2345554444444
No 139
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=38.55 E-value=69 Score=26.76 Aligned_cols=29 Identities=28% Similarity=0.223 Sum_probs=19.2
Q ss_pred CCCcEEEEEecCC--ccee--EEEEEcCCeEEEe
Q 018903 1 MKRMIALGFEGSA--NKIG--VGVVTLDGSILSN 30 (349)
Q Consensus 1 m~~m~iLgIdts~--~~~s--val~~~dg~i~~~ 30 (349)
||.+.++|||-++ ..+. .++++ |..+...
T Consensus 4 ~~~~rv~GiDds~~~~~~~l~gvv~~-~~~v~g~ 36 (184)
T 2qh9_A 4 MKKWRFLGIDDSFDDRKCCVVGCVTC-GGYVEGF 36 (184)
T ss_dssp GGGSEEEEEEEEECSSCEEEEEEEEE-TTEEEEE
T ss_pred ccCcEEEEEEcccCCCceEEEEEEEE-CCEEEEE
Confidence 8899999999876 2222 33556 6666543
No 140
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=37.84 E-value=39 Score=31.62 Aligned_cols=28 Identities=29% Similarity=0.601 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
+-...+++.+|+++|++++|||.|.+..
T Consensus 31 ~L~~~A~~~Al~~agl~~~~Id~v~~g~ 58 (394)
T 3ss6_A 31 ELAVPVLQEAVKRGGVEPHEVDEVILGH 58 (394)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEEE
Confidence 3455789999999999999999998754
No 141
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=37.25 E-value=2.5e+02 Score=27.15 Aligned_cols=71 Identities=15% Similarity=0.054 Sum_probs=38.1
Q ss_pred EEEEEecCCcceeEEEEEcCCeEEEeeeeeccCCCCCCCcchhh----hhhHHhhHHHHHHHHHHHcCCCC-CCCCEEEE
Q 018903 5 IALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRET----AQHHLEHVLPLVKSALKTAGITP-DEIDCLCY 79 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~dg~i~~~~~~~~~~~~~~g~~p~~~----~~~h~~~l~~~i~~~L~~~~i~~-~did~Ia~ 79 (349)
.+|+||-+....-+++++.+|+--.....+. | ..|... ...-+..+...|.+.+++.+... ++.-.+.+
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~----~--~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGf 154 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTTQNK----Y--RLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGF 154 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEEEEE----E--ECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEE
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEEEEE----E--ecCchhccCCHHHHHHHHHHHHHHHHHHhcccccccccceEE
Confidence 4799999999999999986664111111000 0 012211 23345555666777777765432 23334554
Q ss_pred ec
Q 018903 80 TR 81 (349)
Q Consensus 80 ~~ 81 (349)
+.
T Consensus 155 tf 156 (485)
T 3o8m_A 155 TF 156 (485)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 142
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=36.34 E-value=42 Score=30.25 Aligned_cols=40 Identities=25% Similarity=0.453 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
.+..+++.+|+++|++++|||.|..-. ++.++...+.+.|
T Consensus 233 ~~~~~i~~al~~agl~~~dId~~~~H~-----~~~~~~~~~~~~l 272 (335)
T 1u6e_A 233 KMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHc
Confidence 456789999999999999999998642 2345555454444
No 143
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=36.19 E-value=18 Score=32.52 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhc--HHHHHHHHH
Q 018903 231 DLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCN--ERLQEMMRT 278 (349)
Q Consensus 231 diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N--~~l~~~l~~ 278 (349)
..|..+-+...+.+...+..+... +...|+|.|||+.+ ..+.+.+.+
T Consensus 226 ~~A~~i~~~~~~~L~~~l~~l~~~-~p~~VvlgGgv~~~~~~~l~~~l~~ 274 (305)
T 1zc6_A 226 PEADALLRQAGEDAWAIARALDPQ-DELPVALCGGLGQALRDWLPPGFRQ 274 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTT-CCSCEEEESHHHHHTGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEECCchHhHHHHHHHHHHh
Confidence 445555555555566655555444 66789999999753 345555544
No 144
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=35.50 E-value=1.4e+02 Score=27.03 Aligned_cols=44 Identities=18% Similarity=0.041 Sum_probs=26.6
Q ss_pred eEEEEeCCeeEEEEEeCCcEEE-EeecccchhhHHHHHHHhHcCC
Q 018903 130 VVLYVSGGNTQVIAYSEGRYRI-FGETIDIAVGNCLDRFARVLTL 173 (349)
Q Consensus 130 ~~l~i~gg~~~~~~~~~g~~~~-~~~~~~~S~Gr~~Dava~lLGl 173 (349)
+++++.|+.+.+..+.++.+.. ...+.+-....+++.++..+--
T Consensus 175 ~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 175 AVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 4566666667665566666421 1123455667888888886654
No 145
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=35.42 E-value=46 Score=30.73 Aligned_cols=29 Identities=7% Similarity=-0.069 Sum_probs=24.9
Q ss_pred cEEEEEecCCcceeEEEEEc----CCeEEEeee
Q 018903 4 MIALGFEGSANKIGVGVVTL----DGSILSNPR 32 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~----dg~i~~~~~ 32 (349)
|++||||.+...+.+++++. +|+++...+
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~ 61 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSVHACVTRY 61 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEecccCCCccEEEEee
Confidence 67999999999999999997 788887543
No 146
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=35.39 E-value=63 Score=29.83 Aligned_cols=27 Identities=30% Similarity=0.621 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
-...+++.+|+++|++++|||.|.+..
T Consensus 77 La~~Aa~~aL~~agl~~~dId~vi~~t 103 (359)
T 3h78_A 77 LMVPAARQAIEAAGLLPEDIDLLLVNT 103 (359)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEEEe
Confidence 344689999999999999999998754
No 147
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=34.33 E-value=44 Score=31.17 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
+.+...++.+|+++|++++|||.|+.
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~ 312 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAI 312 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEE
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEE
Confidence 45667899999999999999999986
No 148
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=33.65 E-value=46 Score=30.21 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
-...+++++|+++|++++|||.|.+..
T Consensus 68 la~~Aa~~al~~ag~~~~~Id~vi~~t 94 (333)
T 4dfe_A 68 LAFIASQRAIEAADIDPQSIDLIIVAT 94 (333)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 345689999999999999999987754
No 149
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=33.17 E-value=69 Score=26.85 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=44.1
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHHHc-CCCCCCcccccccCccCcc
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAH-GSSTPLEESTFTQRFRTDE 331 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~~~-~~~~~~~~~~~~~~~~~~~ 331 (349)
+..++++|+++|=..-.|++...+.. .+.|+++++... .|++---..-.++...++. |-. + -+.+|
T Consensus 122 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D-a~as~~~~~h~~al~~m~~~g~~--v--------~tt~e 188 (204)
T 3hu5_A 122 RRRGVDTLLVSGTQYPNCIRGTAVDA--FALDYDVVVVTD-ACSARTPGVAESNINDMRAMGIT--C--------VPLTA 188 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE-EEECSSHHHHHHHHHHHHHHTCE--E--------ECGGG
T ss_pred HhCCCCeEEEeeeccchHHHHHHHHH--HHCCCEEEEehh-hhCCCCHHHHHHHHHHHHHhCCE--E--------EEHHH
Confidence 44689999999888888888776643 357999988754 2333222223334444432 221 1 24557
Q ss_pred ccccccccc
Q 018903 332 VHAVWREKE 340 (349)
Q Consensus 332 ~~~~~~~~~ 340 (349)
+.+.|...|
T Consensus 189 ~l~~l~~~~ 197 (204)
T 3hu5_A 189 LDDVLARRE 197 (204)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHhcc
Confidence 777776655
No 150
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=32.95 E-value=85 Score=26.43 Aligned_cols=38 Identities=24% Similarity=0.220 Sum_probs=30.0
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..|+++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 101 ~~~gi~~lvi~Gv~T~~CV~~Ta~dA--~~~Gy~V~vv~D 138 (208)
T 1yac_A 101 KATGKKQLIIAGVVTEVCVAFPALSA--IEEGFDVFVVTD 138 (208)
T ss_dssp HHTTCSEEEEEEBSCCCCCHHHHHHH--HHTTCEEEEETT
T ss_pred HhcCCCEEEEEEeccchhHHHHHHHH--HHCCCEEEEECc
Confidence 45699999999988888888776654 357999988765
No 151
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=32.05 E-value=46 Score=29.56 Aligned_cols=26 Identities=19% Similarity=0.433 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
.+..+++.+|+++|++++|||.|..-
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 45678999999999999999999763
No 152
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=31.87 E-value=38 Score=30.36 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEe
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYT 80 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~ 80 (349)
..+..+++.+|+++|++++|||.|..-
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 356678999999999999999999763
No 153
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=31.55 E-value=60 Score=30.42 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHH
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVL 99 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~l 99 (349)
.++..++++|+++|++++|||.++. +|+ +.|+-..+++.|
T Consensus 292 ~~~~~i~~~L~~~gl~~~dId~~v~--Hqa---n~~i~~~~~~~l 331 (392)
T 3led_A 292 LVSEMIIEHAREIGIDPHGLKRMWL--HQA---NINMNEIIGRKV 331 (392)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEE--CSS---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEE--cCC---CHHHHHHHHHHh
Confidence 4556899999999999999999885 554 356655666654
No 154
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=31.31 E-value=82 Score=26.35 Aligned_cols=38 Identities=11% Similarity=0.119 Sum_probs=28.8
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..|+++|+++|=..-.|++...+.. .++|+++++...
T Consensus 138 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 175 (207)
T 1nf9_A 138 RAAGRDQLVLCGVYAHVGVLISTVDA--YSNDIQPFLVAD 175 (207)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHcCCCEEEEEeeecChHHHHHHHHH--HHCCCEEEEeCc
Confidence 44689999999988888888665543 457999888654
No 155
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=31.29 E-value=86 Score=25.66 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=29.6
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 106 ~~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 143 (182)
T 3eef_A 106 RANGIDTVVLIGLDADICVRHTAADA--LYRNYRIIVVED 143 (182)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhcCCCeEEEEEeccCHHHHHHHHHH--HHCCCEEEEehh
Confidence 44689999999888888888776643 357999988754
No 156
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=30.78 E-value=2.6e+02 Score=24.08 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=48.8
Q ss_pred EEEEEecCCcc--e---eEEEEE-cCCeEEEeeeee-ccCCCCC-CCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCCCE
Q 018903 5 IALGFEGSANK--I---GVGVVT-LDGSILSNPRHT-YFTPPGQ-GFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDC 76 (349)
Q Consensus 5 ~iLgIdts~~~--~---sval~~-~dg~i~~~~~~~-~~~~~~~-g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~did~ 76 (349)
+|.|+|.|+.+ . ++++++ .+.+++...... ...-+|- |+ ++ +.. .+.+-.++++... ++|.
T Consensus 38 ~VaGvDvsy~~~~~a~aa~Vvl~~~~~~~v~~~~~~~~~~~PYIPG~---La----FRE-~P~~l~al~~L~~---~Pdl 106 (225)
T 2w36_A 38 YVAGVALSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGL---LA----FRE-GPLFLKAWEKLRT---KPDV 106 (225)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEEECCSCCCTTC---TH----HHH-HHHHHHHHTTCCS---CCSE
T ss_pred EEEEEEeeeeCCCcEEEEEEEEECCCCcEEEEEEEEecccCCcccch---HH----Hhh-hHHHHHHHHhcCC---CCCE
Confidence 57899998853 2 233344 246777654221 1223331 32 11 112 2445556665443 7899
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 77 LCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 77 Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
|.++. =|..=.-|.| +|-.|...+++|.++|-
T Consensus 107 llvDG-~Gi~HpR~~G--lA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 107 VVFDG-QGLAHPRKLG--IASHMGLFIEIPTIGVA 138 (225)
T ss_dssp EEEES-CSSSSTTSCC--HHHHHHHHHTSCEEEEE
T ss_pred EEEeC-eEEEcCCCCC--chhhhhhhhCCCEEEEE
Confidence 99985 2322111222 34456667789999875
No 157
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=30.66 E-value=70 Score=29.77 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHHc-CCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTA-GITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~-~i~~~did~Ia~~~ 81 (349)
+-...++..+|+++ |++++|||.|.+..
T Consensus 29 ~L~~~a~~~Al~~a~gi~~~~Id~v~~g~ 57 (387)
T 3goa_A 29 DLSAHLMRSLLARNPSLTAATLDDIYWGC 57 (387)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEEc
Confidence 34457899999999 99999999998764
No 158
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=30.53 E-value=2.7e+02 Score=24.21 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=50.3
Q ss_pred cEEEEEecCCcc------eeEEEEE-cCCeEEEeeeee-ccCCCCC-CCcchhhhhhHHhhHHHHHHHHHHHcCCCCCCC
Q 018903 4 MIALGFEGSANK------IGVGVVT-LDGSILSNPRHT-YFTPPGQ-GFLPRETAQHHLEHVLPLVKSALKTAGITPDEI 74 (349)
Q Consensus 4 m~iLgIdts~~~------~sval~~-~dg~i~~~~~~~-~~~~~~~-g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~di 74 (349)
-+|.|+|.|+.+ +++++++ .+.+++...... ...-+|- |+ ++.+ . .+.+-++|++.. .++
T Consensus 40 ~~VaGvDvsy~~~~~~~~Aa~Vvl~~~~l~~v~~~~~~~~~~~PYIPG~---LaFR----E-~P~ll~al~~L~---~~P 108 (237)
T 3goc_A 40 GRVTGVDVAYDDERDVVVAAAVVLDAATLDVVAEATAVGEVSFPYVPGL---LAFR----E-IPTVLAALDALP---CPP 108 (237)
T ss_dssp SEEEEEEEEECSSSSEEEEEEEEEETTTCCEEEEEEEEEECCSCCCTTC---GGGG----T-HHHHHHHHHTSS---SCC
T ss_pred eEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEEeccccCCCCcch---hhhh----h-HHHHHHHHHhcC---CCC
Confidence 368899998742 2344444 356776644221 1223331 33 1211 2 244555666543 368
Q ss_pred CEEEEecCCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 75 DCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 75 d~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
|.|.|+. -|..=.-|.| +|-.|...+++|.++|-
T Consensus 109 dlllvDG-~GiaHPRr~G--lAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 109 GLIVCDG-YGVAHPRRFG--LASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SEEEEES-CSSCSTTSCC--HHHHHHHHHCSCEEEEE
T ss_pred CEEEEeC-ceeecCCCcc--hhheeeeecCCCEEeee
Confidence 9999985 3322222223 34456667889999873
No 159
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=30.51 E-value=56 Score=30.01 Aligned_cols=26 Identities=23% Similarity=0.272 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
...+++.+|+++|++++|||.|.+..
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t 95 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVS 95 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 44689999999999999999988754
No 160
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=29.21 E-value=42 Score=31.38 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=21.8
Q ss_pred CeEEEEccchhcHHHHHHHHHHHHh
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCSE 282 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~~ 282 (349)
++|+|+||.++=..+.++|.+.+..
T Consensus 299 ~nIvLtGG~s~~~G~~~rl~~el~~ 323 (394)
T 1k8k_B 299 KHIVLSGGSTMYPGLPSRLERELKQ 323 (394)
T ss_dssp TTCEEESGGGCSTTHHHHHHHHHHH
T ss_pred hCEEEeCcccccccHHHHHHHHHHH
Confidence 5799999999999999999888764
No 161
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=28.95 E-value=96 Score=25.65 Aligned_cols=38 Identities=13% Similarity=0.033 Sum_probs=29.8
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..|+++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 128 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 165 (199)
T 1j2r_A 128 RRRGIDTIVLCGISTNIGVESTARNA--WELGFNLVIAED 165 (199)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHCCCCEEEEEeeeccHHHHHHHHHH--HHCCCEEEEehh
Confidence 34689999999988888888876653 457999888654
No 162
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=28.95 E-value=64 Score=29.19 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
...+++.+|+++|++++|||.|.+..
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t 87 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVAT 87 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 44689999999999999999998754
No 163
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=28.36 E-value=1.7e+02 Score=27.45 Aligned_cols=75 Identities=8% Similarity=-0.014 Sum_probs=41.6
Q ss_pred CCCcEEEEEecCCcceeEEEEEc-CCeEEEeeeeeccCCCC-------CCC-cchhhhhhHHhhHHHHHHHHHHHcCCCC
Q 018903 1 MKRMIALGFEGSANKIGVGVVTL-DGSILSNPRHTYFTPPG-------QGF-LPRETAQHHLEHVLPLVKSALKTAGITP 71 (349)
Q Consensus 1 m~~m~iLgIdts~~~~sval~~~-dg~i~~~~~~~~~~~~~-------~g~-~p~~~~~~h~~~l~~~i~~~L~~~~i~~ 71 (349)
|+ .||.||+++.+...+|++. ++++++.-..+++-... .+. ........|...+.. |-+.|++.++.
T Consensus 1 m~--~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~ig~~~~~~~~~~~~~~~~~~~~~~h~~a~~~-il~~L~~~~~~- 76 (384)
T 3khy_A 1 MS--EILVLNCGSSSVKFALINPHTSQSLVTGLAENIATKNCKVVFKAEHKIVKYLENGSYKDVFEM-LKDFLVENKHL- 76 (384)
T ss_dssp CC--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESTTSTTCEEEEESSSEEEEECTTCCHHHHHHH-HHHHHHHTTCG-
T ss_pred CC--EEEEEECCchhheEEEEecCCCceEEEEEEEecCCCCceEEEecCCceeeecCCCCHHHHHHH-HHHHHHhcCCc-
Confidence 64 6999999999999999983 45555543333321000 000 000112335554444 44445666754
Q ss_pred CCCCEEEE
Q 018903 72 DEIDCLCY 79 (349)
Q Consensus 72 ~did~Ia~ 79 (349)
++|++|..
T Consensus 77 ~~i~aVGH 84 (384)
T 3khy_A 77 EKIVAIGH 84 (384)
T ss_dssp GGEEEEEE
T ss_pred cceeEEec
Confidence 58888865
No 164
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=28.34 E-value=50 Score=30.65 Aligned_cols=43 Identities=9% Similarity=0.063 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCC
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKP 106 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p 106 (349)
..+. .++.+|+++|++++|||.|..-. ++.++.-.+ ++.+++|
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H~-----~~~~i~d~~----~~~lgl~ 295 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVHA-----GGPRILDDL----STFLEVD 295 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEEC-----SHHHHHHHH----HHHSCSC
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHH----HHHcCCC
Confidence 4466 89999999999999999998642 344554443 4445554
No 165
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=28.24 E-value=73 Score=29.02 Aligned_cols=30 Identities=23% Similarity=0.195 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec-CCCC
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR-GPGM 85 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~-gPg~ 85 (349)
...+++.+|+++|++++|||.|.+.. .|..
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~ 102 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDY 102 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCC
Confidence 44689999999999999999998754 3544
No 166
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=28.18 E-value=62 Score=28.03 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHH
Q 018903 228 TPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMM 276 (349)
Q Consensus 228 ~~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l 276 (349)
+.++++..+ ++.+++.++.+.++.+.-+|+|+||-..........
T Consensus 13 ~~~~l~~~~----A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~ 57 (233)
T 3nwp_A 13 TPSALEQQL----ASKIASQLQEAVDARGKASLVVSGGSTPLKLFQLLS 57 (233)
T ss_dssp SHHHHHHHH----HHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHH
T ss_pred CHHHHHHHH----HHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHH
Confidence 345554444 444455555555556667899999977665554443
No 167
>3a9l_A Poly-gamma-glutamate hydrolase; zinc ION binding, open alpha/beta mixed core structure; 1.90A {Bacillus phage PHINIT1}
Probab=28.11 E-value=47 Score=28.64 Aligned_cols=37 Identities=22% Similarity=0.412 Sum_probs=28.8
Q ss_pred eEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCCh
Q 018903 259 DVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVD 297 (349)
Q Consensus 259 ~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D 297 (349)
..++.||- |..|.+.|.+.|...||.+-..|..+.|+
T Consensus 111 ~~v~vGG~--d~~l~~~I~~~L~~~Gf~v~~~~~~l~G~ 147 (216)
T 3a9l_A 111 KNTLVGGL--NTELRNLIVSKLNSKGIAAEVATDRFTAT 147 (216)
T ss_dssp CCEEEESS--CHHHHHHHHHHHHHTTCCCEECCSSCCCC
T ss_pred cEEEECCC--CHHHHHHHHHHHHhCCeeeeeCCCCCCCC
Confidence 56777885 99999999999999999876655444444
No 168
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=28.05 E-value=96 Score=25.84 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=29.7
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 109 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 146 (198)
T 3mcw_A 109 RANGWLELVVAGVSTSNSVEATVRMA--GNLGFAVCLAED 146 (198)
T ss_dssp HHHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HcCCCCeEEEEEcCcChHHHHHHHHH--HHCCCEEEEeCc
Confidence 34589999999998888988876653 457999888654
No 169
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=27.98 E-value=1.3e+02 Score=24.27 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEecCCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
.+...|+++|++.|+. |+.|+.-.-----.+ -..++..+++|+..++
T Consensus 25 ~i~~ai~~aL~~~gl~---v~~lATid~K~dE~g-------L~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 25 AIIAAVRAAERAFGVT---VDYLATAPLKADEAG-------LAEAAKGLSLSLEIVA 71 (155)
T ss_dssp HHHHHHHHHHHHHTCC---CCEEEESSCCSCCHH-------HHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHCCCC---eEEEEchhhhCCCHH-------HHHHHHHhCCCeEEEC
Confidence 4567899999999986 999985431111111 2357788899998876
No 170
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=27.94 E-value=1.1e+02 Score=24.94 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=29.0
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..|+++|+++|=..-.|++...+.. .++|+++++...
T Consensus 116 ~~~gi~~lvi~G~~t~~CV~~Ta~da--~~~Gy~v~vv~D 153 (180)
T 1im5_A 116 RGNGVKRVYICGVATEYCVRATALDA--LKHGFEVYLLRD 153 (180)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCEEEEEEeecCHHHHHHHHHH--HHCCCEEEEehh
Confidence 44689999999888888888776643 357999888654
No 171
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=27.86 E-value=94 Score=26.60 Aligned_cols=55 Identities=13% Similarity=-0.003 Sum_probs=36.2
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCChHHHHHHHHHHHHH
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAF 310 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~D~G~~iG~a~~~~~ 310 (349)
+..|+++|+++|=..-.|++...+.. .+.|+++++... .|++---..-.++...+
T Consensus 134 ~~~gi~~lii~G~~t~~CV~~Ta~da--~~~Gy~v~vv~D-a~as~~~~~h~~aL~~~ 188 (223)
T 3tg2_A 134 RETGRDQLIITGVYAHIGILSTALDA--FMFDIQPFVIGD-GVADFSLSDHEFSLRYI 188 (223)
T ss_dssp HHHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE-EEECSSHHHHHHHHHHH
T ss_pred HhcCcCceEEeecccChHHHHHHHHH--HHCCCEEEEeCc-ccCCCCHHHHHHHHHHH
Confidence 44689999999999989988887654 357999888654 34433222233344434
No 172
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=27.72 E-value=89 Score=25.77 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=44.2
Q ss_pred CCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEc--------C-CCCCChHHHHHHHHHHHHHHcCCCCC--Ccccc---
Q 018903 257 KKDVLIVGGVGCNERLQEMMRTMCSERGGRLFAT--------D-DRYCVDNGAMIAYTGLLAFAHGSSTP--LEEST--- 322 (349)
Q Consensus 257 ~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~--------~-~~~~~D~G~~iG~a~~~~~~~~~~~~--~~~~~--- 322 (349)
.++|+++|| ..++...+.|.+..+. +++|... . ..++.+.++.++..+......++..- +++++
T Consensus 36 kRPvIl~Gg-v~~~~A~~eL~~~ae~-~iPVvtT~~g~g~~~~~~~~p~~~~~G~~~~g~~~~~~~~~~~~~~~~aDLvI 113 (174)
T 1ytl_A 36 KRPLLIVGP-DMTDEMFERVKKFVEK-DITVVATGSAITRFIDAGLGEKVNYAVLHELTQFLLDPDWKGFDGQGNYDLVL 113 (174)
T ss_dssp SSEEEEECS-CCCHHHHHHHHHHHTS-SSEEEEETTHHHHHHHTTCGGGSEEECHHHHHHHHHSTTCCCTTSSCCCSEEE
T ss_pred CCCEEEECC-CCCccHHHHHHHHHHc-CCCEEEcccccCcCCCCCCCccccccccHHHHHHhhhhhhhhhcccCCCCEEE
Confidence 568999999 8888888889888777 8998754 2 12122233323345555554443311 23444
Q ss_pred -cccCccCcc
Q 018903 323 -FTQRFRTDE 331 (349)
Q Consensus 323 -~~~~~~~~~ 331 (349)
+|-||+..+
T Consensus 114 ~iG~rf~~~~ 123 (174)
T 1ytl_A 114 MLGSIYYHGS 123 (174)
T ss_dssp EESCCHHHHH
T ss_pred EECCcCCccc
Confidence 888886433
No 173
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=27.62 E-value=1.4e+02 Score=26.16 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=35.5
Q ss_pred cCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCC
Q 018903 255 CDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCV 296 (349)
Q Consensus 255 ~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~ 296 (349)
.|.+-|+.|.|..+...+.++|.+..++.|-.+|+|.-...|
T Consensus 83 aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~G 124 (253)
T 1j5p_A 83 NPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGG 124 (253)
T ss_dssp SSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCC
T ss_pred CCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccc
Confidence 578889999999999999999999998888899988754444
No 174
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=27.54 E-value=94 Score=28.52 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec----CCCCCchhHHHHHHHHHHHhhcCCCeEeec
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR----GPGMGAPLQVAAVVVRVLSQLWKKPIVAVN 111 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~----gPg~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (349)
...+++.+|+++|++++|||.|.+.. .|.... .+..++..|.. .++|.+.|+
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~---~a~~v~~~lG~-~~~~~~~v~ 113 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWP---AASYVAHEAVG-RHVPAFGLA 113 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSC---HHHHHHHHHTC-SSSCEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCccccc---HHHHHHHHhCC-CCCcEEEEc
Confidence 44689999999999999999998765 454432 12223333322 246666665
No 175
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=27.50 E-value=1e+02 Score=25.74 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=29.4
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 119 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 156 (197)
T 4h17_A 119 QELGHLDLIVCGFMSHSSVSTTVRRA--KDYGYRCTLVED 156 (197)
T ss_dssp HHHTCSEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhcCCCEEEEEeeCcCHHHHHHHHHH--HHCCCEEEEeCc
Confidence 34589999999988888888776654 357999888653
No 176
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=27.42 E-value=60 Score=29.97 Aligned_cols=31 Identities=10% Similarity=0.283 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHcCCCCCCCCEEEEe-cCCCC
Q 018903 55 HVLPLVKSALKTAGITPDEIDCLCYT-RGPGM 85 (349)
Q Consensus 55 ~l~~~i~~~L~~~~i~~~did~Ia~~-~gPg~ 85 (349)
-...+++.+|+++|++++|||.|.+. ..|..
T Consensus 83 La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~ 114 (365)
T 3gwa_A 83 LAYEAARKLFAQGAVGADQVDFVILCTQAPDY 114 (365)
T ss_dssp HHHHHHHHHHHTTSCCGGGCCEEEEEESSCSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCC
Confidence 34468999999999999999998774 34543
No 177
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=27.34 E-value=84 Score=28.17 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.-...+++++|+++|+++++||.|.+...
T Consensus 63 ~la~~A~~~al~~ag~~~~~id~vi~~t~ 91 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIVTTN 91 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 34456899999999999999999987653
No 178
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=27.19 E-value=40 Score=31.17 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEE
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCY 79 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~ 79 (349)
..++..++++|+++|++++|||.+++
T Consensus 238 ~~~~~~i~~~L~~~gl~~~did~~v~ 263 (357)
T 3s3l_A 238 DLLVAAKTQALEDAGTAIEDIAHAVI 263 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 35677999999999999999999995
No 179
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=27.01 E-value=1.1e+02 Score=25.12 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=29.0
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 109 ~~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 146 (190)
T 3lqy_A 109 DDAGIKKLVIVGAMTHMAIDAVTRAA--EDLGYECAVAHD 146 (190)
T ss_dssp HHC-CCEEEEEEECTTTHHHHHHHHH--HHHTCEEEEEEE
T ss_pred HhCCCCEEEEEecCcChHHHHHHHHH--HHCCCEEEEech
Confidence 44689999999999999988877654 356999888653
No 180
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=27.00 E-value=1.2e+02 Score=26.73 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHH---HHHHHh-cCCEEEE
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMM---RTMCSE-RGGRLFA 289 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l---~~~l~~-~g~~v~~ 289 (349)
+++.+++.++.+.++.+.-+|+|+||-.-........ .+.+.. ..+.+|.
T Consensus 20 ~A~~i~~~i~~~i~~~~~~~l~LsgGstP~~ly~~L~~~~~~~idw~~~v~~f~ 73 (266)
T 3eb9_A 20 GCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLHDEHLNLLREKRALRFFM 73 (266)
T ss_dssp HHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHHHhhcCCChHHcEEEEe
Confidence 4555555665555666667999999966555544443 334443 3344444
No 181
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=26.70 E-value=1.2e+02 Score=26.10 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=29.6
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .+.|++|++...
T Consensus 155 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 192 (236)
T 3ot4_A 155 AQRGVQTLLVAGATTSGCVRASVVDA--MSAGFRPLVLSD 192 (236)
T ss_dssp HHTTCCEEEEEESCTTTHHHHHHHHH--HHHTCEEEEEEE
T ss_pred HHCCCCEEEEeCccCcHHHHHHHHHH--HHCCCEEEEech
Confidence 44689999999998888888776654 356999888654
No 182
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=26.61 E-value=1.1e+02 Score=26.32 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=29.8
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .+.|++|++...
T Consensus 135 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 172 (233)
T 3irv_A 135 RARDVDTIIVCGTVTNVCCETTIRDG--VHREYKVIALSD 172 (233)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCeEEEEeecccHHHHHHHHHH--HHCCCEEEEech
Confidence 44689999999998888888876653 457999888654
No 183
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=26.28 E-value=2.3e+02 Score=25.29 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHcCCCe--EEEEccc
Q 018903 241 FAMLVEITERAMAHCDKKD--VLIVGGV 266 (349)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~--v~lsGGV 266 (349)
.+.++..++...+++|.+. |.+||||
T Consensus 30 i~~~v~~L~d~l~~~g~~~vvvglSGGi 57 (285)
T 3dpi_A 30 AERRIGFVADYLRTAGLRACVLGISGGI 57 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEccCCh
Confidence 3445677777778888875 7789998
No 184
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=26.06 E-value=1.4e+02 Score=23.96 Aligned_cols=38 Identities=11% Similarity=-0.105 Sum_probs=29.8
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|.+...+.. .+.|++++++..
T Consensus 97 ~~~gi~~lvv~G~~T~~CV~~Ta~da--~~~Gy~v~v~~D 134 (167)
T 2a67_A 97 TEQAVQTLEIAGVQTEFCVDTTIRMA--HGLGYTCLMTPK 134 (167)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHHTCEEEECTT
T ss_pred HHCCCCEEEEEecccChHHHHHHHHH--HHCCCEEEEech
Confidence 34689999999988888888776654 356999999764
No 185
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=25.85 E-value=43 Score=30.53 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEe-cCCCC
Q 018903 57 LPLVKSALKTAGITPDEIDCLCYT-RGPGM 85 (349)
Q Consensus 57 ~~~i~~~L~~~~i~~~did~Ia~~-~gPg~ 85 (349)
..+.+++|+++|++++|||.|.+. .-|.+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~ 96 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPH 96 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCC
Confidence 468999999999999999988754 44543
No 186
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=25.85 E-value=1.1e+02 Score=25.92 Aligned_cols=38 Identities=13% Similarity=0.048 Sum_probs=29.7
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 105 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 142 (211)
T 3oqp_A 105 AARQIDTLTVTGYMTHNCDASTINHA--VHSGLAVEFLHD 142 (211)
T ss_dssp HTTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCEEEEEeeccCHHHHHHHHHH--HHCCCeEEEech
Confidence 44689999999998888888776654 357999888653
No 187
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=25.73 E-value=4.6e+02 Score=25.28 Aligned_cols=139 Identities=13% Similarity=0.156 Sum_probs=68.3
Q ss_pred CCcEEEEEecCCcceeEEEEEc-CCe--EEEeeeeeccCCCCCCCcchh-hhhhHHhhHHHHHHHHHHHc-CCCCCCCCE
Q 018903 2 KRMIALGFEGSANKIGVGVVTL-DGS--ILSNPRHTYFTPPGQGFLPRE-TAQHHLEHVLPLVKSALKTA-GITPDEIDC 76 (349)
Q Consensus 2 ~~m~iLgIdts~~~~sval~~~-dg~--i~~~~~~~~~~~~~~g~~p~~-~~~~h~~~l~~~i~~~L~~~-~i~~~did~ 76 (349)
+.|.+-+||.++...-..+.+. ++. ++...+ ...+-..|+.... -...-.++....++.+-+.. +...+++-+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k--~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~~v~~ 86 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLK--QRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCI 86 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEETTEEEEEEEEE--ECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred cCCeEEEEEeccccEEEEEEEEcCCeeEEEEeeE--EEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 5667899999999988887763 443 333222 1112122321100 01122233344444443333 233345545
Q ss_pred EEEecCCCCCchhHHHH---HHHHHHHhhcCCCeEeec-cHHHHHH--HhhhhcCCCCC-eEEEEeCCeeEEEEEeCCcE
Q 018903 77 LCYTRGPGMGAPLQVAA---VVVRVLSQLWKKPIVAVN-HCVAHIE--MGRIVTGAEDP-VVLYVSGGNTQVIAYSEGRY 149 (349)
Q Consensus 77 Ia~~~gPg~~t~lr~g~---~~ak~la~~~~~p~~~v~-hh~aHa~--sa~~~s~~~~p-~~l~i~gg~~~~~~~~~g~~ 149 (349)
||- ..+|... .|...+...+++++--++ .-+|... ++....+...+ +++++.||.|++...+++++
T Consensus 87 vAT-------sA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 87 VGT-------HTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEP 159 (513)
T ss_dssp EEC-------HHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEE
T ss_pred Eec-------HHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCee
Confidence 442 2466543 355556667788877676 2223221 11111122223 78889999999877666654
No 188
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=25.55 E-value=88 Score=27.27 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHH
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMM 276 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l 276 (349)
+++.+.+.++.+.++.+.-+|+|+||-.-...+....
T Consensus 23 ~A~~i~~~i~~~~~~~~~~~l~LsgGstP~~~y~~L~ 59 (248)
T 3oc6_A 23 AGDRLVDAISSAIGERGQATIVLTGGGTGIGLLKRVR 59 (248)
T ss_dssp HHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHHHH
Confidence 3555566666666666777999999966555544433
No 189
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=25.30 E-value=78 Score=29.41 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=22.5
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 57 LPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 57 ~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
..+++.+|+++|++++|||.|++..-
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~ 111 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTC 111 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 35889999999999999999987654
No 190
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=25.25 E-value=83 Score=28.33 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec-CCCC
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR-GPGM 85 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~-gPg~ 85 (349)
...+++.+|+++|++++|||.|.+.. -|+.
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~ 86 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDF 86 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCc
Confidence 44689999999999999999988754 3544
No 191
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=25.24 E-value=63 Score=27.92 Aligned_cols=44 Identities=14% Similarity=0.128 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHH
Q 018903 229 PADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMM 276 (349)
Q Consensus 229 ~~diA~~~q~~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l 276 (349)
.++++..+ ++.+++.++.+.++.+.-+|+|+||-..........
T Consensus 11 ~~~l~~~~----A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~ 54 (232)
T 3lhi_A 11 AAEAAQSL----ADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALS 54 (232)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHH
T ss_pred HHHHHHHH----HHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHH
Confidence 44454433 445555555555556777999999976655554433
No 192
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=25.05 E-value=90 Score=27.63 Aligned_cols=38 Identities=18% Similarity=0.094 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHH
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMR 277 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~ 277 (349)
+++.+++.++.+.++.+.-+|+|+||-.-...+.....
T Consensus 39 ~A~~i~~~i~~ai~~~~~~~l~LsgGstP~~~y~~L~~ 76 (268)
T 3ico_A 39 AGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSA 76 (268)
T ss_dssp HHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHH
T ss_pred hcchhhhHhHHHHHhcCceEEEEecCCchhHHHHHHHH
Confidence 34455555555555667779999999665555544443
No 193
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=25.04 E-value=1.1e+02 Score=26.99 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=29.4
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..|+++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 141 ~~~gi~~lvi~Gv~T~~CV~~Ta~dA--~~~Gy~V~vv~D 178 (287)
T 2fq1_A 141 KESGRNQLIITGVYAHIGCMTTATDA--FMRDIKPFMVAD 178 (287)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHCCCCEEEEEEeCcchHHHHHHHHH--HHCCCEEEEech
Confidence 45699999999988888988766544 357999888654
No 194
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=24.51 E-value=1.3e+02 Score=25.01 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=29.5
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 122 ~~~gi~~lvi~G~~t~~CV~~Ta~~a--~~~G~~v~v~~D 159 (199)
T 3txy_A 122 RRRGITDIVLTGIATNIGVESTAREA--YENNYNVVVVSD 159 (199)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCEEEEEeeccCHHHHHHHHHH--HHCCCEEEEecH
Confidence 34689999999988888888776654 357999888653
No 195
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=23.47 E-value=95 Score=27.12 Aligned_cols=38 Identities=18% Similarity=0.136 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHHH
Q 018903 240 LFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMR 277 (349)
Q Consensus 240 l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l~ 277 (349)
+++.+++.++.+.++.+.-+|+|+||-.-...+.....
T Consensus 23 ~A~~i~~~i~~a~~~~~~~~l~LsgGstP~~~y~~L~~ 60 (251)
T 3tx2_A 23 AGDRLASAITGALAERGKAMIVLTGGGTGIALLKHLRD 60 (251)
T ss_dssp HHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHh
Confidence 34555666666656667779999999665555544443
No 196
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=23.33 E-value=79 Score=29.60 Aligned_cols=30 Identities=10% Similarity=0.111 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEec-CCCC
Q 018903 56 VLPLVKSALKTAGITPDEIDCLCYTR-GPGM 85 (349)
Q Consensus 56 l~~~i~~~L~~~~i~~~did~Ia~~~-gPg~ 85 (349)
...+++.+|+++|++++|||.|.+.. -|..
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi~~t~t~~~ 151 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVLCACSNMQR 151 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEEEESSCCSC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCC
Confidence 44689999999999999999998743 4543
No 197
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=23.15 E-value=1.3e+02 Score=25.66 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=29.6
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 147 ~~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 184 (226)
T 3kl2_A 147 RSKGVDTIVLGGFLTNCCVESTMRTG--YERGFRVITLTD 184 (226)
T ss_dssp HHHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred hCCCCCcEEEeccCcchHHHHHHHHH--HHCCCEEEEech
Confidence 34589999999998888888876654 357999888653
No 198
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=23.09 E-value=67 Score=27.68 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEccchhcHHHHHHH
Q 018903 239 TLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMM 276 (349)
Q Consensus 239 ~l~~~l~~~~~~~~~~~~~~~v~lsGGVa~N~~l~~~l 276 (349)
.+++.+++.++.+.++.+.-+|+|+||-..........
T Consensus 16 ~~A~~i~~~i~~~i~~~~~~~l~LsgGstp~~~y~~L~ 53 (226)
T 3lwd_A 16 RLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLA 53 (226)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEECCSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHH
Confidence 34555666666666666667899999976665554433
No 199
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=22.95 E-value=3.8e+02 Score=23.39 Aligned_cols=92 Identities=17% Similarity=0.204 Sum_probs=49.2
Q ss_pred EEEEEecCCcc--------eeEEEEE-cCCeEEEeeeee-ccCCCCC-CCcchhhhhhHHhhHHHHHHHHHHHcCCCCCC
Q 018903 5 IALGFEGSANK--------IGVGVVT-LDGSILSNPRHT-YFTPPGQ-GFLPRETAQHHLEHVLPLVKSALKTAGITPDE 73 (349)
Q Consensus 5 ~iLgIdts~~~--------~sval~~-~dg~i~~~~~~~-~~~~~~~-g~~p~~~~~~h~~~l~~~i~~~L~~~~i~~~d 73 (349)
+|-|+|.|+.+ +++++++ .+.+++...... .+.-+|- |+ ++ ++ . .+.+-+++++.. .+
T Consensus 41 ~VaGvDvsy~~~~~~~~~~aa~Vvl~~~~l~vv~~~~~~~~~~~PYIPG~---La-FR---E-~P~ll~al~~L~---~~ 109 (246)
T 3ga2_A 41 TTAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGF---LA-FR---E-LPLIIEAAKKLE---TE 109 (246)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSSSSC---GG-GG---T-HHHHHHHHHHCS---SC
T ss_pred EEEEEEeeeecCCCCeEEEEEEEEEECCCCcEEEEEEEEcccCCCCCCCc---hh-hh---h-HHHHHHHHHhcC---CC
Confidence 68899998732 2344444 356776544221 1223331 33 22 11 2 244555666644 36
Q ss_pred CCEEEEecCCCCCchhHHHHHHHHHHHhhcCCCeEee
Q 018903 74 IDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAV 110 (349)
Q Consensus 74 id~Ia~~~gPg~~t~lr~g~~~ak~la~~~~~p~~~v 110 (349)
+|.|.|+. -|..=.-|.| +|-.|...+++|.++|
T Consensus 110 PdlllvDG-~GiaHPRr~G--lAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 110 PDVFLFDG-NGYLHYNHMG--VATHAAFFLGKPTIGI 143 (246)
T ss_dssp CSCEEEEB-CSSSSTTSCC--HHHHHHHHHTSCEEEE
T ss_pred CCEEEEcC-cEEecCCCcc--hhheeeeecCCCEEee
Confidence 89999985 3332112223 3445666788999987
No 200
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=22.87 E-value=1.7e+02 Score=29.11 Aligned_cols=51 Identities=16% Similarity=0.045 Sum_probs=36.7
Q ss_pred CeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCCCCCC--hHHHHHHHHHHH
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCV--DNGAMIAYTGLL 308 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~~~~~--D~G~~iG~a~~~ 308 (349)
..|||+||.++=.-+.+...+.|..++..+-.|...-.. -++++.|...|.
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhh
Confidence 579999999999999999999998767777666532111 225566665543
No 201
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=22.84 E-value=1.3e+02 Score=26.65 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
.-...+++++|+++|+++++||.|.+..
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~~~ 80 (313)
T 1zow_A 53 DLAYEASVKAIADAGIQPEDIDMIIVAT 80 (313)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 3445689999999999999999987754
No 202
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=22.74 E-value=36 Score=32.42 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=18.7
Q ss_pred CeEEEEccchhcHHHHHHHHHHHH
Q 018903 258 KDVLIVGGVGCNERLQEMMRTMCS 281 (349)
Q Consensus 258 ~~v~lsGGVa~N~~l~~~l~~~l~ 281 (349)
.+|+|+||.++=..+.+||.+.+.
T Consensus 328 ~nIvLtGG~sl~~G~~~RL~~El~ 351 (427)
T 3dwl_A 328 KNIVLSGGSTLFKNFGNRLQRDLK 351 (427)
T ss_dssp HCEEEESGGGCSTTTTHHHHHHHH
T ss_pred CCEEEEccCcCCCChHHHHHHHHH
Confidence 469999999877777777776664
No 203
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=22.63 E-value=2.2e+02 Score=24.27 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=20.7
Q ss_pred EEEEecCCcceeEEEEEcCCeEEEe
Q 018903 6 ALGFEGSANKIGVGVVTLDGSILSN 30 (349)
Q Consensus 6 iLgIdts~~~~sval~~~dg~i~~~ 30 (349)
.+.||.+..++.++++. +|+++..
T Consensus 141 ~~viDiGggst~~~~~~-~g~~~~~ 164 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE-KGKITAT 164 (272)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEE
T ss_pred EEEEEECCCcEEEEEEE-CCEEEEE
Confidence 47899999999999999 8988764
No 204
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=21.84 E-value=1.6e+02 Score=24.13 Aligned_cols=38 Identities=16% Similarity=-0.038 Sum_probs=29.3
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .+.|+++++...
T Consensus 121 ~~~gi~~lvv~G~~t~~CV~~Ta~da--~~~G~~v~v~~D 158 (186)
T 3gbc_A 121 RQRGVDEVDVVGIATDHCVRQTAEDA--VRNGLATRVLVD 158 (186)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhcCCCEEEEEEecccHHHHHHHHHH--HHCCCeEEEEhh
Confidence 44689999999988888888776654 357999888653
No 205
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=21.84 E-value=2.1e+02 Score=28.43 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=10.1
Q ss_pred HHHHHHHHHHcCCCCCCCCE
Q 018903 57 LPLVKSALKTAGITPDEIDC 76 (349)
Q Consensus 57 ~~~i~~~L~~~~i~~~did~ 76 (349)
..+|++++++++...+|++.
T Consensus 50 ~~si~~a~~~a~~~~~d~~l 69 (607)
T 1nbw_A 50 LAALEQALAKTPWSMSDVSR 69 (607)
T ss_dssp HHHHHHHHTTSSCCGGGEEE
T ss_pred HHHHHHHHHHhCCcccCceE
Confidence 34455555555554444444
No 206
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=21.74 E-value=1.2e+02 Score=26.68 Aligned_cols=29 Identities=24% Similarity=0.353 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
.-...+++++|+++|+++++||.|.+...
T Consensus 52 ~l~~~a~~~al~~ag~~~~~id~v~~~~~ 80 (309)
T 2ebd_A 52 YMATQAAKEALREANLSPEELDLIILATL 80 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 34456899999999999999999987643
No 207
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=21.57 E-value=1.6e+02 Score=30.95 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=42.7
Q ss_pred cEEEEEecCCcceeEEEEEcC-Ce--EEEeeeeeccCCCCCCCcchh----hhhhHHhhHHHHHHHHHHHcCCCCCCCCE
Q 018903 4 MIALGFEGSANKIGVGVVTLD-GS--ILSNPRHTYFTPPGQGFLPRE----TAQHHLEHVLPLVKSALKTAGITPDEIDC 76 (349)
Q Consensus 4 m~iLgIdts~~~~sval~~~d-g~--i~~~~~~~~~~~~~~g~~p~~----~~~~h~~~l~~~i~~~L~~~~i~~~did~ 76 (349)
..+|+||-+....-|++++.+ |+ ++....... ..|.. ....-+..+...|.+.+++.++..+++ .
T Consensus 526 G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~-------~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l-~ 597 (917)
T 1cza_N 526 GDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIY-------AIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRM-P 597 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEE-------CCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-E
T ss_pred eEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEE-------ecCcccccCCHHHHHHHHHHHHHHHHHHcCCCccce-e
Confidence 468999999999999999864 53 542211110 01222 123345566677888888777665555 5
Q ss_pred EEEec
Q 018903 77 LCYTR 81 (349)
Q Consensus 77 Ia~~~ 81 (349)
+.++.
T Consensus 598 lG~tf 602 (917)
T 1cza_N 598 LGFTF 602 (917)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 208
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=21.08 E-value=93 Score=28.52 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHcC------CCCCCCCEEEEecCCCCCchhHHHHHHHH
Q 018903 54 EHVLPLVKSALKTAG------ITPDEIDCLCYTRGPGMGAPLQVAAVVVR 97 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~------i~~~did~Ia~~~gPg~~t~lr~g~~~ak 97 (349)
..+..+++.+|+++| ++++|||.| . |+. +.++...+++
T Consensus 267 ~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~--H~~---~~~i~d~~~~ 310 (374)
T 2h84_A 267 SGIEAFVDTLLDKAKLQTSTAISAKDCEFL-I--HTG---GKSILMNIEN 310 (374)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-E--CCC---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccCCChhhcCEe-E--CCC---CHHHHHHHHH
Confidence 456678999999999 999999999 4 442 3455444443
No 209
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=20.79 E-value=2e+02 Score=22.98 Aligned_cols=20 Identities=0% Similarity=0.039 Sum_probs=16.2
Q ss_pred cceeEEEEEcCCeEEEeeeee
Q 018903 14 NKIGVGVVTLDGSILSNPRHT 34 (349)
Q Consensus 14 ~~~sval~~~dg~i~~~~~~~ 34 (349)
.+.|.||++ ||+++..+...
T Consensus 106 SSPS~ALfK-dGelVh~ieRh 125 (147)
T 3fhk_A 106 SSPSMALLK-GKEVVHFIPRH 125 (147)
T ss_dssp CSSEEEEEE-TTEEEEEECGG
T ss_pred CCchheeee-CCEEEEEeehh
Confidence 467999999 99999877433
No 210
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.72 E-value=1e+02 Score=27.50 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
.-...+++++|+++|+++++||.|.+..
T Consensus 52 ~la~~a~~~al~~ag~~~~~id~vi~~~ 79 (322)
T 1ub7_A 52 DLAFKAVEDLLRRHPGALEGVDAVIVAT 79 (322)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 3345689999999999999999887654
No 211
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=20.71 E-value=1.6e+02 Score=25.10 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=28.5
Q ss_pred HHcCCCeEEEEccchhcHHHHHHHHHHHHhcCCEEEEcCC
Q 018903 253 AHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDD 292 (349)
Q Consensus 253 ~~~~~~~v~lsGGVa~N~~l~~~l~~~l~~~g~~v~~~~~ 292 (349)
+..++++|+++|=..-.|++...+.. .++|+++++...
T Consensus 163 ~~~gi~~lvv~G~~T~~CV~~Ta~dA--~~~Gy~V~Vv~D 200 (235)
T 2wt9_A 163 KERGIDTVYVVGIATDFCVAWTALDA--VKQGFKTLVIED 200 (235)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHCCCCEEEEEEeCccHHHHHHHHHH--HhCCCEEEEech
Confidence 34689999999888888877776654 357999888653
No 212
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=20.67 E-value=1.4e+02 Score=27.84 Aligned_cols=25 Identities=24% Similarity=0.284 Sum_probs=21.7
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 57 LPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 57 ~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
..+++.+|+++|++++|||.|++..
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t 131 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCS 131 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 3588999999999999999998754
No 213
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=20.44 E-value=1.8e+02 Score=25.81 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHcCCCe--EEEEccc
Q 018903 243 MLVEITERAMAHCDKKD--VLIVGGV 266 (349)
Q Consensus 243 ~l~~~~~~~~~~~~~~~--v~lsGGV 266 (349)
.++..++...++++.+. |.||||+
T Consensus 26 ~~v~~L~d~l~~~g~~~vvvglSGGv 51 (279)
T 3q4g_A 26 RRVAFIKRKLTEARYKSLVLGISGGV 51 (279)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSH
T ss_pred HHHHHHHHHHHHcCCCCEEEEccCCH
Confidence 34566777777788775 7789997
No 214
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=20.36 E-value=1.6e+02 Score=26.01 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCEEEEec
Q 018903 54 EHVLPLVKSALKTAGITPDEIDCLCYTR 81 (349)
Q Consensus 54 ~~l~~~i~~~L~~~~i~~~did~Ia~~~ 81 (349)
.-...+++++|+++|+++++||.|.+..
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~g~ 80 (317)
T 1hnj_A 53 TMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 3345689999999999999999977654
No 215
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=20.21 E-value=2.7e+02 Score=26.29 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=22.9
Q ss_pred EEEEEecCCcceeEEEEEc-CCeEEEeeeee
Q 018903 5 IALGFEGSANKIGVGVVTL-DGSILSNPRHT 34 (349)
Q Consensus 5 ~iLgIdts~~~~sval~~~-dg~i~~~~~~~ 34 (349)
+||.||+++.++..+|++- ++++++....+
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie 32 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCE 32 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEE
Confidence 6999999999999999983 34666544333
No 216
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=20.05 E-value=95 Score=29.90 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=22.5
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEecC
Q 018903 57 LPLVKSALKTAGITPDEIDCLCYTRG 82 (349)
Q Consensus 57 ~~~i~~~L~~~~i~~~did~Ia~~~g 82 (349)
..+++.+|+++|++++|||.|++..-
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~ 140 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTC 140 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEee
Confidence 35889999999999999999987654
Done!