Your job contains 1 sequence.
>018907
MDPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAYRSKQGNLYTLQTVVYFIK
HYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIETVIANDHVLNDGKIVE
TDGGGDDLELDDISLIRACERPLKDREALLECKGIDFYSVLVSSTRREEERQRIESQQRK
DGLVAKNRLMGVDERGIGYGGGGGGGGGGAGDEAYEANPKPKLLQLKSGKIGEGVPIILV
PSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVKAYEVR
DKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNKRIVTWGSME
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018907
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077076 - symbol:PHP "PLANT HOMOLOGOUS TO PARA... 694 3.2e-100 2
FB|FBgn0037657 - symbol:hyx "hyrax" species:7227 "Drosoph... 213 9.1e-30 2
UNIPROTKB|Q5ZLM0 - symbol:CDC73 "Parafibromin" species:90... 199 2.2e-27 2
UNIPROTKB|E1BPQ8 - symbol:CDC73 "Uncharacterized protein"... 199 4.6e-27 2
UNIPROTKB|A2SXS7 - symbol:HRPT2 "Uncharacterized protein"... 199 4.6e-27 2
UNIPROTKB|Q6P1J9 - symbol:CDC73 "Parafibromin" species:96... 199 4.6e-27 2
MGI|MGI:2384876 - symbol:Cdc73 "cell division cycle 73, P... 199 4.6e-27 2
RGD|1311766 - symbol:Cdc73 "cell division cycle 73" speci... 199 4.6e-27 2
ZFIN|ZDB-GENE-040426-1309 - symbol:cdc73 "cell division c... 188 1.2e-26 2
WB|WBGene00018064 - symbol:F35F11.1 species:6239 "Caenorh... 200 3.9e-24 2
POMBASE|SPBC17G9.02c - symbol:SPBC17G9.02c "RNA polymeras... 173 1.5e-12 2
SGD|S000004410 - symbol:CDC73 "Component of the Paf1p com... 162 1.7e-12 2
CGD|CAL0006129 - symbol:CDC73 species:5476 "Candida albic... 138 3.5e-09 2
UNIPROTKB|Q5AI70 - symbol:CDC73 "Potential RNA Pol II elo... 138 3.5e-09 2
UNIPROTKB|G4MT03 - symbol:MGG_15720 "Uncharacterized prot... 146 1.8e-07 1
ASPGD|ASPL0000007138 - symbol:AN5894 species:162425 "Emer... 132 9.3e-06 1
>TAIR|locus:2077076 [details] [associations]
symbol:PHP "PLANT HOMOLOGOUS TO PARAFIBROMIN"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP] [GO:0070860 "RNA polymerase I core factor complex"
evidence=ISS] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009911 GO:GO:0010228 GO:GO:0051568 eggNOG:COG5157 KO:K15175
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AP000731
EMBL:AY065437 EMBL:AY142611 IPI:IPI00542974 RefSeq:NP_188898.1
UniGene:At.28485 ProteinModelPortal:Q9LJ87 SMR:Q9LJ87 PaxDb:Q9LJ87
PRIDE:Q9LJ87 EnsemblPlants:AT3G22590.1 GeneID:821831
KEGG:ath:AT3G22590 TAIR:At3g22590 HOGENOM:HOG000265304
InParanoid:Q9LJ87 OMA:VWERLEE PhylomeDB:Q9LJ87
ProtClustDB:CLSN2684149 ArrayExpress:Q9LJ87 Genevestigator:Q9LJ87
Uniprot:Q9LJ87
Length = 415
Score = 694 (249.4 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 138/210 (65%), Positives = 156/210 (74%)
Query: 133 ISLIRACERPLKDREALLECKGIDFYSVLVXXXXXXXXXXXXXXXXXKDGLVAKNRLMGV 192
I LIR+ ERPLK R+A+L+CK DFYSVLV KDGLVAK+RLMG
Sbjct: 156 IMLIRSNERPLKSRDAILQCKNRDFYSVLVNSTKREEERQRIESHQRKDGLVAKSRLMGA 215
Query: 193 DERXXXXXXXXXXXXXXXXDEAYEANPKPKLLQLKSGKIGEGVPIILVPSASQTLITIYN 252
+ER D Y+ANPK KL K+GKIGEGVPIILVPSA QTLITIYN
Sbjct: 216 EERGIVGFSSGGGD-----DNGYDANPKSKL-HFKAGKIGEGVPIILVPSAFQTLITIYN 269
Query: 253 VKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVKAYEVRDKPSTMKSEDWD 312
VKEFLEDGVYIP DVK K M G++P+C+TVQKKFSRDR++VV AYEVRDKPS +K +DWD
Sbjct: 270 VKEFLEDGVYIPNDVKAKEMKGLKPDCITVQKKFSRDRERVVTAYEVRDKPSALKPDDWD 329
Query: 313 RVVAVFVLGKEWQFKEWPFKDHVEIFNKRI 342
RVVAVFVLGK+WQFK+WPFKDHVEIFNK I
Sbjct: 330 RVVAVFVLGKDWQFKDWPFKDHVEIFNKII 359
Score = 320 (117.7 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 57/107 (53%), Positives = 81/107 (75%)
Query: 1 MDPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAYRSKQGNLYTLQTVVYFIK 60
MDPLS L++FTIR ++DK+ + G FGS+Y+FP + ETAYRSK G+LYTL+ +V+++K
Sbjct: 1 MDPLSVLKEFTIRGDIDKIERVGANYRFGSEYSFPCATETAYRSKSGSLYTLEALVHYVK 60
Query: 61 HYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIETVI 107
+ LKH +Y+Q N +PAVTLPDRKPL +YLTG S+D I+ ++
Sbjct: 61 NQQLKHGEYMQSTVKNSVPAVTLPDRKPLLDYLTGRVASSDSIDFLL 107
>FB|FBgn0037657 [details] [associations]
symbol:hyx "hyrax" species:7227 "Drosophila melanogaster"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IMP]
[GO:0008587 "imaginal disc-derived wing margin morphogenesis"
evidence=IMP] [GO:0008586 "imaginal disc-derived wing vein
morphogenesis" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI;IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] EMBL:AE014297
GO:GO:0045893 GO:GO:0016055 GO:GO:0008586 GO:GO:0007480
GO:GO:0008407 GO:GO:0008587 eggNOG:COG5157
GeneTree:ENSGT00390000001114 KO:K15175 OMA:EYYTLEC GO:GO:0016593
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 GO:GO:0045880
GO:GO:0001745 EMBL:AY061525 EMBL:DQ305403 RefSeq:NP_001163564.1
RefSeq:NP_649863.1 UniGene:Dm.3569 SMR:Q9VHI1 IntAct:Q9VHI1
MINT:MINT-937582 STRING:Q9VHI1 EnsemblMetazoa:FBtr0081968
EnsemblMetazoa:FBtr0300415 GeneID:41086 KEGG:dme:Dmel_CG11990
UCSC:CG11990-RA CTD:41086 FlyBase:FBgn0037657 InParanoid:Q9VHI1
OrthoDB:EOG48CZ9J GenomeRNAi:41086 NextBio:822091 Uniprot:Q9VHI1
Length = 538
Score = 213 (80.0 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 44/107 (41%), Positives = 71/107 (66%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPEC-VTVQKKFSRDRDQVV 294
PII++PSA+ +LIT+ N K+ L++ ++ T K + G + EC V +Q+K R+
Sbjct: 379 PIIIIPSANTSLITMLNAKDILQELRFMSTSDK--KLQGCQRECEVLLQRK----RNNQT 432
Query: 295 KAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDH-VEIFNK 340
+Y V D P+ + ++W RVVAVFV+G +WQFK WP++ + V+IF+K
Sbjct: 433 VSYRVIDNPTKLSQQEWQRVVAVFVMGPQWQFKGWPWEGNPVDIFSK 479
Score = 171 (65.3 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 37/110 (33%), Positives = 65/110 (59%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQG---NLYTLQT 54
DPLS LR + I + ++ + +I+FG ++++P S++T Y K+G YTL+
Sbjct: 3 DPLSLLRQYNINKK--EIVERDSQIIFG-EFSWPKSVKTNYLKYGSGKKGAPREYYTLEC 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
++Y +K+ L+H+ Y+++ + +PAV PDRK L YL G T + I+
Sbjct: 60 LLYLLKNVMLQHSVYVRQCAAEDIPAVNRPDRKELLAYLNGETPTCASID 109
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 272 MNGMRPECVTVQKKFSRD-RDQVVKAYEVRDKPSTMK 307
+NG P C ++ K + QV +A E +PS+++
Sbjct: 98 LNGETPTCASIDKSAPLEIPTQVKRAAE--GEPSSVE 132
Score = 37 (18.1 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 17/86 (19%), Positives = 35/86 (40%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRD 289
+ EG P + +A + V++ E + DV K ++ + S +
Sbjct: 122 RAAEGEPSSVEVAAKKARFEETQVQKVREQ-LAARWDVNQKETAVNMDNIKSLSETMSVE 180
Query: 290 RDQVVKAYEVRDKPSTMKSEDWDRVV 315
+ +KA + +K +T+K D D +
Sbjct: 181 KIAAIKAKRLANKRTTIKRTDNDEAM 206
>UNIPROTKB|Q5ZLM0 [details] [associations]
symbol:CDC73 "Parafibromin" species:9031 "Gallus gallus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0000993 "RNA polymerase II core binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISS]
[GO:0019827 "stem cell maintenance" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001711 "endodermal cell fate
commitment" evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=ISS] [GO:0006378 "mRNA
polyadenylation" evidence=ISS] [GO:0045749 "negative regulation of
S phase of mitotic cell cycle" evidence=ISS] [GO:2000134 "negative
regulation of G1/S transition of mitotic cell cycle" evidence=ISS]
GO:GO:0008285 GO:GO:0045944 GO:GO:0006378 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0048147 GO:GO:0050680
GO:GO:2000134 GO:GO:0045749 GO:GO:0030177 GO:GO:0019827
GO:GO:0031648 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 EMBL:AJ719714 IPI:IPI00581830 RefSeq:NP_001026436.1
UniGene:Gga.42090 STRING:Q5ZLM0 PRIDE:Q5ZLM0
Ensembl:ENSGALT00000003897 GeneID:424356 KEGG:gga:424356 CTD:79577
eggNOG:COG5157 GeneTree:ENSGT00390000001114 HOGENOM:HOG000007819
HOVERGEN:HBG055033 InParanoid:Q5ZLM0 KO:K15175 OMA:EYYTLEC
OrthoDB:EOG4PC9RV NextBio:20826697 GO:GO:0016593 GO:GO:0000993
GO:GO:0001711 GO:GO:0045638 InterPro:IPR007852 PANTHER:PTHR12466
Pfam:PF05179 Uniprot:Q5ZLM0
Length = 531
Score = 199 (75.1 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTTVSVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 169 (64.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + + + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNTQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVIWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G T ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLAYLNGETSTSSSID 109
>UNIPROTKB|E1BPQ8 [details] [associations]
symbol:CDC73 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000134 "negative regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045749 "negative
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031442
"positive regulation of mRNA 3'-end processing" evidence=IEA]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0001711 "endodermal cell fate
commitment" evidence=IEA] [GO:0000993 "RNA polymerase II core
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
GO:GO:0045944 GO:GO:0006378 GO:GO:0071222 GO:GO:0000122
GO:GO:0048147 GO:GO:0050680 GO:GO:2000134 GO:GO:0045749
GO:GO:0030177 GO:GO:0019827 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577
GeneTree:ENSGT00390000001114 KO:K15175 OMA:EYYTLEC GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 InterPro:IPR007852 PANTHER:PTHR12466
Pfam:PF05179 EMBL:DAAA02042323 EMBL:DAAA02042324 IPI:IPI00687312
RefSeq:NP_001178201.1 UniGene:Bt.97238 ProteinModelPortal:E1BPQ8
SMR:E1BPQ8 Ensembl:ENSBTAT00000022205 GeneID:100139547
KEGG:bta:100139547 NextBio:20790410 Uniprot:E1BPQ8
Length = 531
Score = 199 (75.1 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 166 (63.5 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVVWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASID 109
>UNIPROTKB|A2SXS7 [details] [associations]
symbol:HRPT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000134 "negative regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048147 "negative regulation of fibroblast
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0031648 "protein destabilization" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IEA] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0001711 "endodermal cell fate commitment" evidence=IEA]
[GO:0000993 "RNA polymerase II core binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] GO:GO:0045944 GO:GO:0006378
GO:GO:0071222 GO:GO:0000122 GO:GO:0048147 GO:GO:0050680
GO:GO:2000134 GO:GO:0045749 GO:GO:0030177 GO:GO:0019827
GO:GO:0031648 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 CTD:79577 eggNOG:COG5157 GeneTree:ENSGT00390000001114
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC
OrthoDB:EOG4PC9RV GO:GO:0016593 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AAEX03018285
EMBL:AAEX03018286 EMBL:DQ366291 RefSeq:NP_001074976.1
UniGene:Cfa.19601 SMR:A2SXS7 STRING:A2SXS7
Ensembl:ENSCAFT00000016748 GeneID:478955 KEGG:cfa:478955
InParanoid:A2SXS7 NextBio:20854213 Uniprot:A2SXS7
Length = 531
Score = 199 (75.1 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 166 (63.5 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVVWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASID 109
>UNIPROTKB|Q6P1J9 [details] [associations]
symbol:CDC73 "Parafibromin" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IDA] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IDA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0031648 "protein destabilization" evidence=IMP]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISS]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IMP] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000993 "RNA polymerase II core binding"
evidence=IDA] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IMP] [GO:0045638 "negative regulation
of myeloid cell differentiation" evidence=IDA] [GO:0019827 "stem
cell maintenance" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:2000134 "negative regulation
of G1/S transition of mitotic cell cycle" evidence=IDA] [GO:0030177
"positive regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001711 "endodermal cell fate commitment" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0016055
GO:GO:0045944 GO:GO:0006378 EMBL:CH471067 GO:GO:0006351
GO:GO:0071222 GO:GO:0000122 GO:GO:0007049 GO:GO:0048147
GO:GO:0050680 GO:GO:2000134 GO:GO:0045749 GO:GO:0030177
GO:GO:0019827 EMBL:AL390863 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AF312865
EMBL:AK026969 EMBL:AK314772 EMBL:AL139133 EMBL:BC007325
EMBL:BC014351 EMBL:BC065037 IPI:IPI00300659 RefSeq:NP_078805.3
UniGene:Hs.378996 ProteinModelPortal:Q6P1J9 SMR:Q6P1J9
DIP:DIP-37884N IntAct:Q6P1J9 STRING:Q6P1J9 PhosphoSite:Q6P1J9
DMDM:74749063 PaxDb:Q6P1J9 PRIDE:Q6P1J9 DNASU:79577
Ensembl:ENST00000367435 GeneID:79577 KEGG:hsa:79577 UCSC:uc001gtb.3
GeneCards:GC01P193090 HGNC:HGNC:16783 HPA:CAB016359 MIM:145000
MIM:145001 MIM:607393 MIM:608266 neXtProt:NX_Q6P1J9 Orphanet:99879
Orphanet:99877 Orphanet:99880 Orphanet:143 PharmGKB:PA29464
InParanoid:Q6P1J9 PhylomeDB:Q6P1J9 ChiTaRS:CDC73 GenomeRNAi:79577
NextBio:68562 ArrayExpress:Q6P1J9 Bgee:Q6P1J9 CleanEx:HS_CDC73
Genevestigator:Q6P1J9 GermOnline:ENSG00000134371 Uniprot:Q6P1J9
Length = 531
Score = 199 (75.1 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 166 (63.5 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVVWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASID 109
>MGI|MGI:2384876 [details] [associations]
symbol:Cdc73 "cell division cycle 73, Paf1/RNA polymerase II
complex component" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0000993 "RNA polymerase II core
binding" evidence=ISO] [GO:0001711 "endodermal cell fate
commitment" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010390 "histone
monoubiquitination" evidence=ISO] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0031442 "positive regulation of mRNA 3'-end
processing" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=ISO] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO]
[GO:0033523 "histone H2B ubiquitination" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=ISO]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISO] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IDA] [GO:2000134 "negative regulation of G1/S transition
of mitotic cell cycle" evidence=ISO] MGI:MGI:2384876 GO:GO:0008285
GO:GO:0016055 GO:GO:0045944 GO:GO:0006378 GO:GO:0006351
GO:GO:0071222 GO:GO:0000122 GO:GO:0007049 GO:GO:0048147
GO:GO:0050680 GO:GO:2000134 GO:GO:0045749 GO:GO:0030177
GO:GO:0019827 GO:GO:0031648 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
GeneTree:ENSGT00390000001114 HOGENOM:HOG000007819
HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AK080861
EMBL:BC027756 EMBL:BC031127 IPI:IPI00170345 RefSeq:NP_666103.1
UniGene:Mm.156727 UniGene:Mm.393505 UniGene:Mm.398849
ProteinModelPortal:Q8JZM7 SMR:Q8JZM7 IntAct:Q8JZM7 STRING:Q8JZM7
PhosphoSite:Q8JZM7 PaxDb:Q8JZM7 PRIDE:Q8JZM7
Ensembl:ENSMUST00000018337 GeneID:214498 KEGG:mmu:214498
UCSC:uc007cwx.1 InParanoid:Q8JZM7 NextBio:374332 Bgee:Q8JZM7
Genevestigator:Q8JZM7 GermOnline:ENSMUSG00000026361 Uniprot:Q8JZM7
Length = 531
Score = 199 (75.1 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 166 (63.5 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVVWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASID 109
>RGD|1311766 [details] [associations]
symbol:Cdc73 "cell division cycle 73" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO;ISS] [GO:0000993 "RNA
polymerase II core binding" evidence=IEA;ISO;ISS] [GO:0001711
"endodermal cell fate commitment" evidence=IEA;ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA;ISO;ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;ISS] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA;ISO;ISS] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO;ISS] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA;ISO;ISS] [GO:0031442
"positive regulation of mRNA 3'-end processing"
evidence=IEA;ISO;ISS] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA;ISO;ISS]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA;ISO]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA;ISO;ISS] [GO:0045749 "negative regulation of S phase
of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;ISS] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA;ISO]
[GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA;ISO;ISS] [GO:2000134 "negative regulation of G1/S
transition of mitotic cell cycle" evidence=IEA;ISO;ISS] RGD:1311766
GO:GO:0008285 GO:GO:0016055 GO:GO:0045944 GO:GO:0006378
GO:GO:0006351 GO:GO:0071222 GO:GO:0000122 GO:GO:0007049
GO:GO:0048147 GO:GO:0050680 GO:GO:2000134 GO:GO:0045749
GO:GO:0030177 GO:GO:0019827 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:BC097445
IPI:IPI00372006 RefSeq:NP_001019940.1 UniGene:Rn.162332
ProteinModelPortal:Q4V8C8 STRING:Q4V8C8 PhosphoSite:Q4V8C8
PRIDE:Q4V8C8 GeneID:304832 KEGG:rno:304832 UCSC:RGD:1311766
InParanoid:Q4V8C8 NextBio:653711 Genevestigator:Q4V8C8
GermOnline:ENSRNOG00000003258 Uniprot:Q4V8C8
Length = 531
Score = 199 (75.1 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 46/110 (41%), Positives = 67/110 (60%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVT-VQKKFSR 288
K G PII++P+A+ +LIT+ N K+ L+D ++P+D K K G + E T +Q++ +
Sbjct: 354 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQ--GCQRENETLIQRR--K 409
Query: 289 DRDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
D+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 DQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPW 459
Score = 166 (63.5 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 35/110 (31%), Positives = 64/110 (58%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVVKGDEVIFG-EFSWPKNVKTNYVVWGTGKEGQPREYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G ++ I+
Sbjct: 60 ILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASID 109
>ZFIN|ZDB-GENE-040426-1309 [details] [associations]
symbol:cdc73 "cell division cycle 73, Paf1/RNA
polymerase II complex component, homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0034243 "regulation of transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0030218 "erythrocyte differentiation" evidence=IGI] [GO:0051301
"cell division" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0016593
"Cdc73/Paf1 complex" evidence=IDA] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=IMP]
ZFIN:ZDB-GENE-040426-1309 GO:GO:0007507 GO:GO:0051301 GO:GO:0030218
CTD:79577 eggNOG:COG5157 GeneTree:ENSGT00390000001114
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OrthoDB:EOG4PC9RV
GO:GO:0016593 InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179
GO:GO:0034243 GO:GO:0021529 EMBL:CT573433 EMBL:FP017159
EMBL:BC053163 IPI:IPI00499017 RefSeq:NP_956642.1 UniGene:Dr.78293
IntAct:Q7T3D4 STRING:Q7T3D4 Ensembl:ENSDART00000013607
GeneID:393319 KEGG:dre:393319 InParanoid:Q7T3D4 NextBio:20814371
Uniprot:Q7T3D4
Length = 521
Score = 188 (71.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 230 KIGEGVPIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRD 289
K G PII++P+A+ +LIT+ N K+ L+D ++ ++ K K R V +Q++ +D
Sbjct: 353 KKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVTSEEK-KKQGIQRDNEVLLQRR--KD 409
Query: 290 RDQ-------VVKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPF 331
+ Q V Y V D+P + +DWDRVVAVFV G WQFK WP+
Sbjct: 410 QVQPGGATLSVTVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPW 458
Score = 176 (67.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 36/110 (32%), Positives = 65/110 (59%)
Query: 2 DPLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAY----RSKQGN---LYTLQT 54
D LS LR + I+ + ++ GDE++FG ++++P +++T Y K+G YTL +
Sbjct: 3 DVLSVLRQYNIQKK--EIVAKGDEVIFG-EFSWPKNVKTNYVIWGTGKEGQPKEYYTLDS 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIE 104
+++ + + +L H Y++RA + +P V PDRK L YL G + S+ I+
Sbjct: 60 ILFLLNNVHLPHPSYVRRAATENIPVVRRPDRKDLLSYLNGESSSSTSID 109
>WB|WBGene00018064 [details] [associations]
symbol:F35F11.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 eggNOG:COG5157
GeneTree:ENSGT00390000001114 KO:K15175 InterPro:IPR007852
PANTHER:PTHR12466 Pfam:PF05179 EMBL:FO081297
ProteinModelPortal:Q9N5U5 SMR:Q9N5U5 DIP:DIP-25821N
MINT:MINT-1079424 STRING:Q9N5U5 PaxDb:Q9N5U5
EnsemblMetazoa:F35F11.1.1 EnsemblMetazoa:F35F11.1.2
KEGG:cel:CELE_F35F11.1 UCSC:F35F11.1 CTD:177160 WormBase:F35F11.1
HOGENOM:HOG000022407 InParanoid:Q9N5U5 OMA:AIQRQKN NextBio:895606
Uniprot:Q9N5U5
Length = 517
Score = 200 (75.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVK 295
PII+VPSA T+I +YNV++ L++ Y+P D + K N +P + +Q R ++ V
Sbjct: 354 PIIIVPSAMNTMINLYNVRDILQNFSYVPVDQRRKETN-KKPVDLAIQ----RQKNGVTY 408
Query: 296 AYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDH-VEIF 338
V D + ++DWDRV+AVFV+G WQFK W + + +IF
Sbjct: 409 NIRVIDNAEKLANDDWDRVIAVFVMGVAWQFKGWKWNGNPTDIF 452
Score = 136 (52.9 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 1 MDPLSALRDFTIRSE---LDKVTQTG-DEILFGSDYTFPSSIETAYR--SKQGNLYTLQT 54
MDPL AL+ R E L +VT +G + FG DY + ET+ + K Y+L++
Sbjct: 1 MDPLEALQKHVQRPEEFPLREVTVSGISYVAFG-DYAYKKDTETSLQIYGKSDEFYSLES 59
Query: 55 VVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTG 95
+V F+K+ + H Y++ A + + AVT DRK + EYL G
Sbjct: 60 LVVFLKYSHENHGVYVKEAAAAGVRAVTRIDRKNVTEYLQG 100
>POMBASE|SPBC17G9.02c [details] [associations]
symbol:SPBC17G9.02c "RNA polymerase II accessory
factor, Cdc73 family (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=ISO] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISO] PomBase:SPBC17G9.02c GO:GO:0005829
GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006368
eggNOG:COG5157 KO:K15175 GO:GO:0016593 InterPro:IPR007852
PANTHER:PTHR12466 Pfam:PF05179 PIR:T39725 RefSeq:NP_595891.1
STRING:Q9UUE7 EnsemblFungi:SPBC17G9.02c.1 GeneID:2539616
KEGG:spo:SPBC17G9.02c HOGENOM:HOG000163861 OMA:KGYYFHF
OrthoDB:EOG4T1MWK NextBio:20800773 Uniprot:Q9UUE7
Length = 371
Score = 173 (66.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 236 PIILV-PSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMR-PECVTVQKKFSRDRDQV 293
PIIL+ PSAS +L+T++N+K+FLE+G+++P G R PE + + K S +
Sbjct: 206 PIILLSPSAS-SLLTMHNIKKFLEEGIFVPPAEAAHAAGGGRGPELIALSHKSSNSKFGT 264
Query: 294 VKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFN 339
++ + + + K + WDRVV VF G+ WQF+++ + + ++F+
Sbjct: 265 MR-FIIVEGTEKFKPDYWDRVVCVFTTGQAWQFRDYKWSEPHQLFH 309
Score = 53 (23.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 14 SELDKVTQTGDEILFGSDYTFPSSIE--TAY-RSKQGNLYTLQTVVYFIKHYNLKHT--- 67
S+++K+ + ILF + T P I+ T + + + + ++L++V YF + L+ T
Sbjct: 27 SKVEKI-EDAQYILFDEN-TSPILIDEPTKFIKLENDSHFSLRSV-YFA--WLLRDTSIA 81
Query: 68 DYIQRARSNKLPAVTLPDRKPLYEYLTGVTDS 99
+YIQ+ + +T +R L +L G +DS
Sbjct: 82 EYIQQCSELGIQNLTFLERTDLISWLEGSSDS 113
>SGD|S000004410 [details] [associations]
symbol:CDC73 "Component of the Paf1p complex" species:4932
"Saccharomyces cerevisiae" [GO:0034402 "recruitment of 3'-end
processing factors to RNA polymerase II holoenzyme complex"
evidence=IMP] [GO:0006362 "transcription elongation from RNA
polymerase I promoter" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IGI] [GO:0000993 "RNA polymerase II core
binding" evidence=IPI] [GO:0001089 "TFIIF-class binding
transcription factor activity" evidence=IMP;IPI] [GO:0045910
"negative regulation of DNA recombination" evidence=IMP]
[GO:0001076 "RNA polymerase II transcription factor binding
transcription factor activity" evidence=IPI] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:2001173
"regulation of histone H2B conserved C-terminal lysine
ubiquitination" evidence=IDA] [GO:2001255 "positive regulation of
histone H3-K36 trimethylation" evidence=IMP] [GO:0090262
"regulation of transcription-coupled nucleotide-excision repair"
evidence=IGI] [GO:2001209 "positive regulation of transcription
elongation from RNA polymerase I promoter" evidence=IDA]
[GO:2001165 "positive regulation of phosphorylation of RNA
polymerase II C-terminal domain serine 2 residues" evidence=IMP]
SGD:S000004410 GO:GO:0003682 EMBL:BK006945 GO:GO:0006368
GO:GO:0035327 GO:GO:0045910 GO:GO:0032968 GO:GO:0006362
eggNOG:COG5157 GeneTree:ENSGT00390000001114 KO:K15175 GO:GO:0016593
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179
HOGENOM:HOG000163861 OMA:KGYYFHF OrthoDB:EOG4T1MWK EMBL:U20162
PIR:S59383 RefSeq:NP_013522.1 PDB:3V46 PDB:4DM4 PDBsum:3V46
PDBsum:4DM4 ProteinModelPortal:Q06697 SMR:Q06697 DIP:DIP-1148N
IntAct:Q06697 MINT:MINT-545984 STRING:Q06697 PaxDb:Q06697
PeptideAtlas:Q06697 EnsemblFungi:YLR418C GeneID:851136
KEGG:sce:YLR418C CYGD:YLR418c NextBio:967887 Genevestigator:Q06697
GermOnline:YLR418C GO:GO:0001089 GO:GO:2001255 GO:GO:2001165
GO:GO:2001209 GO:GO:0034402 GO:GO:2001173 GO:GO:0090262
Uniprot:Q06697
Length = 393
Score = 162 (62.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 35/105 (33%), Positives = 58/105 (55%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVK 295
PIIL+PSA+ +++T+ N+K+FL + Y V +N+ + V ++K F R + ++
Sbjct: 238 PIILIPSAASSILTVANIKQFLLESKY----VNPRNLPSVPNGLVNIEKNFERI-SRPIR 292
Query: 296 AYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNK 340
V + K E WDRVVA+F G WQF + + E+F +
Sbjct: 293 FIIVDNTRMFTKPEYWDRVVAIFTTGHTWQFNNYQWNSPQELFQR 337
Score = 67 (28.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 33 TFPSSIETAYRSKQGNLYTLQTVVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEY 92
+FP + ET G+L L+ +V+ + + DY+ ++ +L V+ R L +
Sbjct: 49 SFPLNEETEIEI-DGSLVQLRIIVHCWMNKDSSAADYLADCQNKQLTNVSFLQRTDLINW 107
Query: 93 LTGVTDSADQIE 104
L+G T+S+ ++
Sbjct: 108 LSGNTESSQYLK 119
>CGD|CAL0006129 [details] [associations]
symbol:CDC73 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IGI] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0035327 "transcriptionally active chromatin" evidence=IEA]
[GO:2001255 "positive regulation of histone H3-K36 trimethylation"
evidence=IEA] [GO:0090262 "regulation of transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:2001173 "regulation
of histone H2B conserved C-terminal lysine ubiquitination"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0034402 "recruitment of
3'-end processing factors to RNA polymerase II holoenzyme complex"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] [GO:0006362 "transcription elongation
from RNA polymerase I promoter" evidence=IEA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IEA] [GO:2001209 "positive regulation of
transcription elongation from RNA polymerase I promoter"
evidence=IEA] [GO:2001165 "positive regulation of phosphorylation
of RNA polymerase II C-terminal domain serine 2 residues"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001089 "TFIIF-class binding transcription factor activity"
evidence=IEA] [GO:0000993 "RNA polymerase II core binding"
evidence=IEA] CGD:CAL0006129 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0030447 eggNOG:COG5157 KO:K15175 InterPro:IPR007852
PANTHER:PTHR12466 Pfam:PF05179 PIR:T52156 RefSeq:XP_721209.1
RefSeq:XP_721481.1 STRING:Q5AI70 GeneID:3636830 GeneID:3637151
KEGG:cal:CaO19.10500 KEGG:cal:CaO19.2983 Uniprot:Q5AI70
Length = 370
Score = 138 (53.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDR--DQV 293
PIILV A+ L+++ N+KEFLEDGV+ + + G RP V D+
Sbjct: 211 PIILVSPATTALLSLSNIKEFLEDGVF------TEPVPGNRPNGGLVIVNHPSDKLISTG 264
Query: 294 VKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNK 340
K V + + K E WDRV+A+F G+ WQF + + +F K
Sbjct: 265 QKIMVVDNIENFNKMEYWDRVIAIFTTGQTWQFSRYIHPEPEVLFQK 311
Score = 62 (26.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 41/172 (23%), Positives = 63/172 (36%)
Query: 3 PLSALRDFTIRSEL------DKVTQT---GDEILFGSD---YTFPSSIETAYRSKQGNLY 50
PL A R I+ E D+ T + E+ FG+D Y+ + K +
Sbjct: 6 PLKAFRKAVIKEERIEFFKNDETTDSINDATEVQFGTDKNKYSLDMATNFYNDEKLTDAQ 65
Query: 51 TLQTVVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIETVIAND 110
+L++VV+ H TDY S +P + + L +L G +D+ I+ A D
Sbjct: 66 SLRSVVFCYLHEKDSITDYKVAGESLNIPVFSFLVKTELSTWLHGNSDTCMFIKKE-AED 124
Query: 111 HVLNDGKIVETXXXXXXXXXXX----ISLIRACERPLKDREALLE-CKGIDF 157
K ++ + I ER D A L K IDF
Sbjct: 125 KTSKSVKSTDSSSQVNNKKHKLDDPQLERISKFERESVDHNAALRGSKNIDF 176
>UNIPROTKB|Q5AI70 [details] [associations]
symbol:CDC73 "Potential RNA Pol II elongation accessory
factor" species:237561 "Candida albicans SC5314" [GO:0030447
"filamentous growth" evidence=IGI] CGD:CAL0006129 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0030447 eggNOG:COG5157 KO:K15175
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 PIR:T52156
RefSeq:XP_721209.1 RefSeq:XP_721481.1 STRING:Q5AI70 GeneID:3636830
GeneID:3637151 KEGG:cal:CaO19.10500 KEGG:cal:CaO19.2983
Uniprot:Q5AI70
Length = 370
Score = 138 (53.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDR--DQV 293
PIILV A+ L+++ N+KEFLEDGV+ + + G RP V D+
Sbjct: 211 PIILVSPATTALLSLSNIKEFLEDGVF------TEPVPGNRPNGGLVIVNHPSDKLISTG 264
Query: 294 VKAYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNK 340
K V + + K E WDRV+A+F G+ WQF + + +F K
Sbjct: 265 QKIMVVDNIENFNKMEYWDRVIAIFTTGQTWQFSRYIHPEPEVLFQK 311
Score = 62 (26.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 41/172 (23%), Positives = 63/172 (36%)
Query: 3 PLSALRDFTIRSEL------DKVTQT---GDEILFGSD---YTFPSSIETAYRSKQGNLY 50
PL A R I+ E D+ T + E+ FG+D Y+ + K +
Sbjct: 6 PLKAFRKAVIKEERIEFFKNDETTDSINDATEVQFGTDKNKYSLDMATNFYNDEKLTDAQ 65
Query: 51 TLQTVVYFIKHYNLKHTDYIQRARSNKLPAVTLPDRKPLYEYLTGVTDSADQIETVIAND 110
+L++VV+ H TDY S +P + + L +L G +D+ I+ A D
Sbjct: 66 SLRSVVFCYLHEKDSITDYKVAGESLNIPVFSFLVKTELSTWLHGNSDTCMFIKKE-AED 124
Query: 111 HVLNDGKIVETXXXXXXXXXXX----ISLIRACERPLKDREALLE-CKGIDF 157
K ++ + I ER D A L K IDF
Sbjct: 125 KTSKSVKSTDSSSQVNNKKHKLDDPQLERISKFERESVDHNAALRGSKNIDF 176
>UNIPROTKB|G4MT03 [details] [associations]
symbol:MGG_15720 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM001232 InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179
RefSeq:XP_003714469.1 EnsemblFungi:MGG_15720T0 GeneID:12984674
KEGG:mgr:MGG_15720 Uniprot:G4MT03
Length = 421
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/116 (34%), Positives = 56/116 (48%)
Query: 236 PIILVPSASQTLITIYNVKEFLEDGVYIPTDVKVKNMNGMRPECVTVQKKFSRDRDQVVK 295
PIIL+ + +L+ I N+K FLE G Y+P D + V K+ R
Sbjct: 242 PIILLSPSMSSLLRISNIKSFLEGGRYVPAD---NSSTASMLHISRVMKEIDPARPM--- 295
Query: 296 AYEVRDKPSTMKSEDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNKRI---VTW-GS 347
+ + + P K E W+RVVAVF G+ WQFK + + E+F I V W GS
Sbjct: 296 RFILVEGPEQFKPEYWNRVVAVFTTGQTWQFKNYKWPQPQELFRHVIGIYVGWRGS 351
>ASPGD|ASPL0000007138 [details] [associations]
symbol:AN5894 species:162425 "Emericella nidulans"
[GO:2001255 "positive regulation of histone H3-K36 trimethylation"
evidence=IEA] [GO:0090262 "regulation of transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:2001173 "regulation
of histone H2B conserved C-terminal lysine ubiquitination"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0006362 "transcription
elongation from RNA polymerase I promoter" evidence=IEA]
[GO:0034402 "recruitment of 3'-end processing factors to RNA
polymerase II holoenzyme complex" evidence=IEA] [GO:0045910
"negative regulation of DNA recombination" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:2001209 "positive
regulation of transcription elongation from RNA polymerase I
promoter" evidence=IEA] [GO:2001165 "positive regulation of
phosphorylation of RNA polymerase II C-terminal domain serine 2
residues" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001089 "TFIIF-class binding
transcription factor activity" evidence=IEA] [GO:0000993 "RNA
polymerase II core binding" evidence=IEA] EMBL:BN001301
GO:GO:0003746 EMBL:AACD01000100 eggNOG:COG5157 KO:K15175
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179
HOGENOM:HOG000163861 OMA:KGYYFHF RefSeq:XP_663498.1 STRING:Q5B0N6
EnsemblFungi:CADANIAT00007139 GeneID:2870707 KEGG:ani:AN5894.2
OrthoDB:EOG4SXRN7 Uniprot:Q5B0N6
Length = 504
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 219 PKPKLLQLKSGKIGEGVPIILV-PSASQTLITIYNVKEFLEDGVYIPTDVKVKNM-NGMR 276
P L Q + G PIIL+ PSAS +LI + NV+ FL DGV++P D M N
Sbjct: 299 PSAGLSQPRKGTSKTQDPIILLSPSAS-SLIRMSNVRSFLGDGVFVPPDHPTLAMPNSAA 357
Query: 277 PECVTVQKKF------SRDRDQVVKAYEVR--------DKPSTMKSEDWDRVVAVFVLGK 322
+ + + S R + + R D + K + W R+VAVF G+
Sbjct: 358 SNILYIHRPLGISDPSSSSRALGSQGHHARKPTRFILVDSTANFKPDYWQRLVAVFTTGQ 417
Query: 323 EWQFKEWPFKDHVEIF 338
WQFK + + E+F
Sbjct: 418 TWQFKSYKWSSPPELF 433
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 305 0.00098 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 607 (65 KB)
Total size of DFA: 216 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.45u 0.09s 22.54t Elapsed: 00:00:01
Total cpu time: 22.46u 0.09s 22.55t Elapsed: 00:00:01
Start: Fri May 10 10:08:06 2013 End: Fri May 10 10:08:07 2013