Query 018909
Match_columns 349
No_of_seqs 220 out of 1625
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:03:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 3.6E-48 7.7E-53 365.3 32.8 251 49-347 64-335 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.5E-47 3.4E-52 332.4 22.2 273 24-349 1-298 (379)
3 KOG0698 Serine/threonine prote 100.0 4.8E-45 1E-49 342.3 29.5 253 52-346 42-308 (330)
4 PTZ00224 protein phosphatase 2 100.0 1.6E-44 3.4E-49 341.6 31.6 259 24-345 1-274 (381)
5 PF00481 PP2C: Protein phospha 100.0 5E-45 1.1E-49 331.8 12.8 237 52-334 2-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 4E-43 8.6E-48 319.2 24.5 244 47-345 5-255 (262)
7 PRK14559 putative protein seri 100.0 2.8E-39 6E-44 321.9 29.0 253 44-348 369-641 (645)
8 KOG0699 Serine/threonine prote 100.0 1E-39 2.3E-44 292.9 16.8 164 146-344 328-505 (542)
9 smart00332 PP2Cc Serine/threon 100.0 1E-35 2.2E-40 270.2 29.1 240 49-339 5-255 (255)
10 cd00143 PP2Cc Serine/threonine 100.0 9.4E-36 2E-40 269.8 27.8 243 51-341 2-254 (254)
11 KOG0700 Protein phosphatase 2C 100.0 3.4E-36 7.5E-41 276.7 21.2 231 66-326 82-380 (390)
12 KOG1323 Serine/threonine phosp 99.9 7E-26 1.5E-30 202.0 19.7 253 83-343 142-488 (493)
13 KOG1379 Serine/threonine prote 99.9 1.4E-25 3E-30 200.2 20.8 213 65-341 87-330 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 7.8E-21 1.7E-25 168.0 11.7 181 55-306 3-194 (212)
15 KOG0618 Serine/threonine phosp 99.8 2.3E-19 4.9E-24 179.6 14.7 245 49-344 521-774 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 1.5E-16 3.2E-21 138.5 20.9 184 51-321 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 2.9E-14 6.3E-19 147.2 21.4 189 65-341 563-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.2E-12 2.7E-17 113.6 19.7 181 83-342 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.6 1.1E-05 2.3E-10 77.5 21.9 192 70-342 163-366 (367)
20 PRK10693 response regulator of 88.0 5.2 0.00011 37.2 10.3 96 69-174 150-253 (303)
21 COG2168 DsrH Uncharacterized c 41.9 22 0.00048 26.9 2.2 31 275-306 21-51 (96)
22 PF09436 DUF2016: Domain of un 36.6 22 0.00047 25.5 1.4 17 278-295 26-42 (72)
23 PRK06369 nac nascent polypepti 31.0 2.5E+02 0.0053 22.2 6.6 45 263-307 37-88 (115)
24 COG3700 AphA Acid phosphatase 30.3 1.4E+02 0.0031 25.6 5.4 43 279-322 71-128 (237)
25 PF01436 NHL: NHL repeat; Int 21.9 1.6E+02 0.0035 16.4 3.6 20 156-175 9-28 (28)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.6e-48 Score=365.31 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=211.8
Q ss_pred eeEEEEeeccccCCCCCCCCCcceeeeeccccC--------CCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCC
Q 018909 49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG--------SPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLL 120 (349)
Q Consensus 49 ~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~--------~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~ 120 (349)
.+.++..|++|. |+.|||++++..++.. .....||+|||||| |+.+++++++.|++.+.+...+.
T Consensus 64 ~~~~~~~s~~G~-----R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~~ 136 (365)
T PLN03145 64 VVRSGAWADIGS-----RSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDFP 136 (365)
T ss_pred ceEEEEEccccC-----CCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhccc
Confidence 467899999997 9999999987654421 22468999999999 99999999999999988766565
Q ss_pred CcHHHHHHHHHHHHhHHHhhc--CCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhH
Q 018909 121 DDPVKAYDSAFLTVNAELHSS--EIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDE 198 (349)
Q Consensus 121 ~~~~~~l~~a~~~~~~~l~~~--~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e 198 (349)
.++.++|.++|..+++.+.+. ......+|||++++++.++++|++||||||+|+++.+. .++||.||++.++.|
T Consensus 137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~----~~~LT~DH~~~~~~E 212 (365)
T PLN03145 137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGK----AIEMSRDHKPMCSKE 212 (365)
T ss_pred hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCe----EEEecCCCCCCCHHH
Confidence 677889999999999998762 12233589999999999999999999999999997654 588999999999999
Q ss_pred HHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCcccccC------ceEecceE
Q 018909 199 YERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEKI------GVVAVPEV 271 (349)
Q Consensus 199 ~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k~~------~v~~~p~v 271 (349)
++||++.||.+.. ++++| +++||+|||..+|.. +++++|++
T Consensus 213 ~~RI~~~Gg~v~~--------------------------------g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv 260 (365)
T PLN03145 213 RKRIEASGGYVYD--------------------------------GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPEL 260 (365)
T ss_pred HHHHHHcCCceec--------------------------------ceECCccccccccccccccccccccCCCcceEEEE
Confidence 9999999998732 12222 579999999877542 47899999
Q ss_pred EEEEcCCCCeEEEEEcCCcccccCHHHHHHHHH----ccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCCC
Q 018909 272 SVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAA----KYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNV 347 (349)
Q Consensus 272 ~~~~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~----~~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~~~~ 347 (349)
..+++.++|.|||||||||||+|+++++++++. ...+|+++|+.|++.|++ +++.||+|||||+|+..++.
T Consensus 261 ~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~-----rgs~DNITvIVV~l~~~~~~ 335 (365)
T PLN03145 261 MTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK-----RKSGDNLAVVVVCFQSQPPP 335 (365)
T ss_pred EEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----CCCCCCEEEEEEEeecCCCc
Confidence 999999999999999999999999999876664 345899999999999999 79999999999999975543
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-47 Score=332.43 Aligned_cols=273 Identities=24% Similarity=0.431 Sum_probs=228.2
Q ss_pred cccccCCCccccCCcceeeccCCCeeeEEEEeeccccCCCCCCCCCcceeeeecccc-CCCCeEEEEEEcCCCcCcHHHH
Q 018909 24 IYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQ-GSPNVHFFGVFDGHGQFGTQCS 102 (349)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~-~~~~~~~~~V~DG~Gg~G~~as 102 (349)
||-++.+|-..++ ........+.|+..|++|| |-+|||++.....+. +-.+|.||+|||||. |++.|
T Consensus 1 MGaFLdKPkteKh-----n~~G~GNglryg~SSMQGW-----R~eMEDah~A~~~l~~~l~dWSfFAVfDGHA--Gs~va 68 (379)
T KOG0697|consen 1 MGAFLDKPKTEKH-----NAEGEGNGLRYGVSSMQGW-----RVEMEDAHTAVAGLPSPLEDWSFFAVFDGHA--GSQVA 68 (379)
T ss_pred CCccccCcccccc-----cccCcCCceeeeeccccch-----hhhhhhhhhhhhcCCCCccCceEEEEEcCcc--chHHH
Confidence 5556666654333 3334456899999999999 999999997654443 357899999999999 99999
Q ss_pred HHHHHHHHHHHhcCCCCC--------CcHHHHHHHHHHHHhHHHhh---cCCCCCCCCceEEEEEEeCCEEEEEEecccc
Q 018909 103 NFVQQRLVEELANNPMLL--------DDPVKAYDSAFLTVNAELHS---SEIDDTMSGTTAITVLVVGDKIYVANVGDSR 171 (349)
Q Consensus 103 ~~a~~~l~~~~~~~~~~~--------~~~~~~l~~a~~~~~~~l~~---~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr 171 (349)
.+++++|.+.+.+...+. ++.+.-|+..|.++++.+.. ......++|||++.+++...++|++|+||||
T Consensus 69 ~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSR 148 (379)
T KOG0697|consen 69 NHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSR 148 (379)
T ss_pred HHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcch
Confidence 999999998887654332 36677899999999988876 2233345999999999999999999999999
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-cc
Q 018909 172 AVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TA 250 (349)
Q Consensus 172 ~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ 250 (349)
++++|++. +..-|+||+|.++.|++||+.+||.|.- .|++| ++
T Consensus 149 avl~rng~----~~f~TqDHKP~~p~EkeRIqnAGGSVMI--------------------------------qRvNGsLA 192 (379)
T KOG0697|consen 149 AVLCRNGE----VVFSTQDHKPYLPKEKERIQNAGGSVMI--------------------------------QRVNGSLA 192 (379)
T ss_pred hheecCCc----eEEeccCCCCCChHHHHHHhcCCCeEEE--------------------------------EEecceee
Confidence 99997666 4678999999999999999999999853 12333 89
Q ss_pred ccccCCCccccc--------CceEecceEEEEEcCCCCeEEEEEcCCcccccCHHHHHHHHHcc----CCHHHHHHHHHH
Q 018909 251 FTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKY----TDARDACAAIAG 318 (349)
Q Consensus 251 ltr~lG~~~~k~--------~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~~~----~~~~~~a~~L~~ 318 (349)
++|+|||+++|. ..++++|++........|.||||+|||+||+|+++|++++++.. .+..++|+.+++
T Consensus 193 VSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvD 272 (379)
T KOG0697|consen 193 VSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVD 272 (379)
T ss_pred eehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHH
Confidence 999999999884 35899999999999999999999999999999999999999874 378888998888
Q ss_pred HHHHHHHhcCCCCCCeEEEEEEcCCCCCCCC
Q 018909 319 ESYKLWLENENRTDDITIIIVHIKDFSNVSV 349 (349)
Q Consensus 319 ~a~~~~~~~~g~~DNiTvIvv~~~~~~~~~~ 349 (349)
.++- .|+.||+|+|+|-|.+.+++++
T Consensus 273 tCLh-----KGSRDNMsivlvcfp~APkv~~ 298 (379)
T KOG0697|consen 273 TCLH-----KGSRDNMSIVLVCFPGAPKVSI 298 (379)
T ss_pred HHHh-----ccCccCceEEEEecCCCCCCCH
Confidence 8887 7999999999999999998864
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-45 Score=342.34 Aligned_cols=253 Identities=34% Similarity=0.558 Sum_probs=217.5
Q ss_pred EEEeeccccCCCCCCCCCcceeeeecccc----CCC-CeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCCC---cH
Q 018909 52 YSVLTQRGYYPDSPDKENQDSYCIKTHVQ----GSP-NVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLD---DP 123 (349)
Q Consensus 52 ~~~~s~~G~~~~~~r~~nED~~~v~~~~~----~~~-~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~~---~~ 123 (349)
.+.++.+|+ |..|||.+.....+. ... ...+|||||||| |..+|+|+.++|+..+.+...+.. .+
T Consensus 42 ~~~~~~~~~-----r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~~~~~~ 114 (330)
T KOG0698|consen 42 GSLLSIRGR-----RRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPKDRQDV 114 (330)
T ss_pred eEEEecCCC-----CCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcccchHHH
Confidence 355688887 999999998876543 223 689999999999 999999999999999998876665 37
Q ss_pred HHHHHHHHH-HHhHHHhhcCCCCCCCCceEEEEEEeCC-EEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHH
Q 018909 124 VKAYDSAFL-TVNAELHSSEIDDTMSGTTAITVLVVGD-KIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER 201 (349)
Q Consensus 124 ~~~l~~a~~-~~~~~l~~~~~~~~~~GtT~~~~~i~~~-~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~r 201 (349)
..+++++|. .++..+.+.......+|||++++++.++ ++|+||+|||||++++.++ ++++||.||+|..+.|++|
T Consensus 115 ~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~---~a~~Ls~DHkP~~~~E~~R 191 (330)
T KOG0698|consen 115 KDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG---VAVQLSVDHKPDREDERER 191 (330)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC---eeeeCCCCCCCCcHHHHHH
Confidence 899999999 6999998642223567888888888865 9999999999999998755 3799999999999999999
Q ss_pred HHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCe
Q 018909 202 VKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHL 281 (349)
Q Consensus 202 i~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~ 281 (349)
|+++||+|.... .+.|+ +| ++++||+|||..+|.++++++|++....+.+.|.
T Consensus 192 I~~~GG~v~~~~---------------------~~~Rv---~G---~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~de 244 (330)
T KOG0698|consen 192 IEAAGGRVSNWG---------------------GVWRV---NG---VLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDE 244 (330)
T ss_pred HHHcCCEEEEcC---------------------CcceE---ec---eEEEeeecCCHHhcCCcEecCCceEEEEcCCCCc
Confidence 999999997521 12332 22 3899999999999989999999999999999999
Q ss_pred EEEEEcCCcccccCHHHHHHHHHc----cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 018909 282 FFVVASDGVFEFLSSQAVVDMAAK----YTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN 346 (349)
Q Consensus 282 fLiL~SDGl~d~l~~~ei~~iv~~----~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~~~ 346 (349)
||||+||||||+++++|++++++. ...+..++..|.+.|+. +++.||||||||.|...++
T Consensus 245 FLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~-----~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 245 FLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS-----RGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred EEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh-----cCCCCCeEEEEEEecCccc
Confidence 999999999999999999999998 45899999999999998 8999999999999998864
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.6e-44 Score=341.63 Aligned_cols=259 Identities=26% Similarity=0.427 Sum_probs=211.0
Q ss_pred cccccCCCccccCCcceeeccCCCeeeEEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHHH
Q 018909 24 IYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSN 103 (349)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~ 103 (349)
||....+|+++.-. -...+..+.+++.|++|+ |+.|||++++... .+..+|+|||||| |..+|+
T Consensus 1 mg~~l~~p~~~~~~-----~~~~~~~~~~g~~s~~G~-----R~~nED~~~v~~~----~~~~lfgVfDGHg--G~~~S~ 64 (381)
T PTZ00224 1 MGIMLPKPVLSKLV-----DRAGNSIFRCASACVNGY-----RESMEDAHLLYLT----DDWGFFGVFDGHV--NDECSQ 64 (381)
T ss_pred CCccCCCCcccccc-----ccCCCccEEEEEEeCCCC-----CCCCCCeeEeccC----CCceEEEEEeCCC--cHHHHH
Confidence 56666777765432 224677888999999998 9999999876432 4557999999999 899999
Q ss_pred HHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHhHHHhhcCCCCCCCCceEEEEEEe-CCEEEEEEeccccEEEEEecCCeE
Q 018909 104 FVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVV-GDKIYVANVGDSRAVIAVKDGNRI 182 (349)
Q Consensus 104 ~a~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~-~~~l~ianvGDSr~~l~~~~~~~~ 182 (349)
++++.|.+.+.+..... ..+.|++++..+|+.+.+... .+|||++++++. +++++++||||||+|+++.+.
T Consensus 65 ~~~~~l~~~l~~~~~~~--~~~~l~~a~~~~d~~i~~~~~---~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~--- 136 (381)
T PTZ00224 65 YLARAWPQALEKEPEPM--TDERMEELCLEIDEEWMDSGR---EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGK--- 136 (381)
T ss_pred HHHHHHHHHHHhccccc--cHHHHHHHHHHHHHHHHhccc---CCCCeEEEEEEEECCEEEEEEcccceEEEEECCE---
Confidence 99999998886543221 245689999999999886332 358999988875 579999999999999997554
Q ss_pred EEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCcccc
Q 018909 183 IAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAE 261 (349)
Q Consensus 183 ~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k 261 (349)
.++||.||++.++.|++||.+.||.+.. +++.| +++||+||+..+|
T Consensus 137 -~~~LT~DH~~~~~~E~~RI~~~gg~v~~--------------------------------~Rv~G~l~vTRalGd~~~K 183 (381)
T PTZ00224 137 -LVFATEDHKPNNPGERQRIEACGGRVVS--------------------------------NRVDGDLAVSRAFGDRSFK 183 (381)
T ss_pred -EEEcccCCCCCCHHHHhHHHHccCEecc--------------------------------ccccCceeeecccCCcccc
Confidence 5899999999999999999999987732 12223 7899999997655
Q ss_pred cC--------ceEecceEEEEEcCCCCeEEEEEcCCccc-ccCHHHHHHHHHc----cCCHHHHHHHHHHHHHHHHHhcC
Q 018909 262 KI--------GVVAVPEVSVVQLTPNHLFFVVASDGVFE-FLSSQAVVDMAAK----YTDARDACAAIAGESYKLWLENE 328 (349)
Q Consensus 262 ~~--------~v~~~p~v~~~~l~~~d~fLiL~SDGl~d-~l~~~ei~~iv~~----~~~~~~~a~~L~~~a~~~~~~~~ 328 (349)
.. .++++|++..+++.++| ||||||||||| .++++++.+++.. ..+++++|+.|++.|+. +
T Consensus 184 ~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~-----r 257 (381)
T PTZ00224 184 VKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR-----R 257 (381)
T ss_pred cccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----c
Confidence 43 36789999999999877 59999999999 7999999999863 35899999999999999 8
Q ss_pred CCCCCeEEEEEEcCCCC
Q 018909 329 NRTDDITIIIVHIKDFS 345 (349)
Q Consensus 329 g~~DNiTvIvv~~~~~~ 345 (349)
|+.||||||||+|...+
T Consensus 258 Gs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 258 GSKDNISCLIVQLKDGA 274 (381)
T ss_pred CCCCCEEEEEEEeeCCC
Confidence 99999999999998654
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=5e-45 Score=331.83 Aligned_cols=237 Identities=38% Similarity=0.621 Sum_probs=195.7
Q ss_pred EEEeeccccCCCCCCCCCcceeeeecccc---CCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCCC--cHHHH
Q 018909 52 YSVLTQRGYYPDSPDKENQDSYCIKTHVQ---GSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLD--DPVKA 126 (349)
Q Consensus 52 ~~~~s~~G~~~~~~r~~nED~~~v~~~~~---~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~~--~~~~~ 126 (349)
+++.+.+|+ |..|||++++..++. ...+..+|+|||||| |..+++++.+.|++.+.+...... ++.++
T Consensus 2 ~~~~~~~g~-----r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhg--G~~~a~~~~~~l~~~l~~~~~~~~~~~~~~a 74 (254)
T PF00481_consen 2 YGVSSMQGV-----RKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHG--GSEAAEYASQNLPEFLKENLSFNDGNDIEEA 74 (254)
T ss_dssp EEEEEEECT-----SSSHHEEEEEEEEETCCTTEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCeecCCCC-----CCcccCEEEEecCccccCCCCCcEEEEEecCCC--ChhhHHHHHHHHHHHHHhhcccccccchhhc
Confidence 678888998 999999999987664 456889999999999 999999999999987776543222 58899
Q ss_pred HHHHHHH-HhHHHhhcCC--CCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHH
Q 018909 127 YDSAFLT-VNAELHSSEI--DDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVK 203 (349)
Q Consensus 127 l~~a~~~-~~~~l~~~~~--~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~ 203 (349)
|..+|.. +++.+.+... ....+|||++++++.++++|+|||||||+|+++.++.. ++||.||+|.++.|++||+
T Consensus 75 l~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~---~~Lt~dH~~~~~~E~~RI~ 151 (254)
T PF00481_consen 75 LRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGII---KQLTRDHKPSNPDERERIR 151 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEE---EESS---STTSHHHHHHHH
T ss_pred ccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccc---cccccccccchhhccceee
Confidence 9999999 8888876211 45678999999999999999999999999999877752 5999999999999999999
Q ss_pred HcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCccccc---CceEecceEEEEEcCCC
Q 018909 204 VCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEK---IGVVAVPEVSVVQLTPN 279 (349)
Q Consensus 204 ~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k~---~~v~~~p~v~~~~l~~~ 279 (349)
++||.+.. ++++.| +++||+|||..+|. ++++++|++..+++.++
T Consensus 152 ~~gg~v~~-------------------------------~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~ 200 (254)
T PF00481_consen 152 KAGGRVSE-------------------------------NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPD 200 (254)
T ss_dssp HTT-GEEE-------------------------------TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTT
T ss_pred cccccccc-------------------------------chhhhhccccccccccccccccccceeeeeccccccccccc
Confidence 99998853 233334 68999999999998 79999999999999999
Q ss_pred CeEEEEEcCCcccccCHHHHHHHHHccCC----HHHHHHHHHHHHHHHHHhcCCCCCCe
Q 018909 280 HLFFVVASDGVFEFLSSQAVVDMAAKYTD----ARDACAAIAGESYKLWLENENRTDDI 334 (349)
Q Consensus 280 d~fLiL~SDGl~d~l~~~ei~~iv~~~~~----~~~~a~~L~~~a~~~~~~~~g~~DNi 334 (349)
|.|||||||||||+|+++|+.+++++..+ |+.+|+.|++.|++ .|+.|||
T Consensus 201 d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~-----~gs~DNi 254 (254)
T PF00481_consen 201 DEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIA-----RGSKDNI 254 (254)
T ss_dssp EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH-----TTHHSHE
T ss_pred ceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh-----cCCCCCC
Confidence 99999999999999999999999988655 89999999999999 8999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-43 Score=319.17 Aligned_cols=244 Identities=25% Similarity=0.432 Sum_probs=200.7
Q ss_pred CeeeEEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcC--cHHHHHHHHHHHHHHHhcCCCCCCc--
Q 018909 47 NFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDD-- 122 (349)
Q Consensus 47 ~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~--G~~as~~a~~~l~~~~~~~~~~~~~-- 122 (349)
.+.+.++..|+.|. .|..|||++++..+..+.. ..+|+|||||||+ |..||+.+++.|.+.+.+.......
T Consensus 5 ~~~~~~~~~s~~g~----~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~ 79 (262)
T COG0631 5 ILSLKVAGLSDVGT----VRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNES 79 (262)
T ss_pred cceeeeeeeccCCC----ccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 45677899999999 6999999999986443333 6799999999965 6666666666666666654433322
Q ss_pred HHHHHHHHHHHHhHHHhhc---CCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHH
Q 018909 123 PVKAYDSAFLTVNAELHSS---EIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEY 199 (349)
Q Consensus 123 ~~~~l~~a~~~~~~~l~~~---~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~ 199 (349)
..+.|.+++..+++.+... ......+|||++++++.++++|++||||||+|+++++. .++||.||++.+..++
T Consensus 80 ~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~----~~~lT~DH~~~~~~~~ 155 (262)
T COG0631 80 LEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE----LKQLTEDHSLVNRLEQ 155 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc----eEEeccCCcHHHHHHH
Confidence 6899999999999999873 23446799999999999999999999999999998775 5999999999988877
Q ss_pred HHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCC
Q 018909 200 ERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPN 279 (349)
Q Consensus 200 ~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~ 279 (349)
.|+... +++.. +|.+ .++||+||+.. ...|++....+.++
T Consensus 156 ~~~~~~-------~~~~~-----------------~~~~----------~~ltralG~~~------~~~p~~~~~~~~~~ 195 (262)
T COG0631 156 RGIITP-------EEARS-----------------HPRR----------NALTRALGDFD------LLEPDITELELEPG 195 (262)
T ss_pred hcCCCH-------HHHHh-----------------Cccc----------hhhhhhcCCCc------ccceeEEEEEcCCC
Confidence 665532 22222 3333 36999999996 38899999999998
Q ss_pred CeEEEEEcCCcccccCHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCC
Q 018909 280 HLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFS 345 (349)
Q Consensus 280 d~fLiL~SDGl~d~l~~~ei~~iv~~~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~~ 345 (349)
| |||||||||||.++++++.++++...+++++++.|++.|+. +++.||+|+|+|.+..+.
T Consensus 196 d-~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~-----~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 196 D-FLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALE-----GGGPDNITVVLVRLNGEG 255 (262)
T ss_pred C-EEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHh-----cCCCCceEEEEEEeeccc
Confidence 4 58999999999999999999999878999999999999999 899999999999998765
No 7
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.8e-39 Score=321.87 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=195.0
Q ss_pred cCCCeeeEEEEeeccccCCCCCCCCCcceeeeecccc------C--CCCeEEEEEEcCCCcC--cHHHHHHHHHHHHHHH
Q 018909 44 PSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQ------G--SPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEEL 113 (349)
Q Consensus 44 ~~~~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~------~--~~~~~~~~V~DG~Gg~--G~~as~~a~~~l~~~~ 113 (349)
|...+.+.++..|++|. +|+.|||++.+...+. + .....+|+|||||||+ |..||+++++.|.+.+
T Consensus 369 p~~l~~l~~a~~Td~G~----~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~ 444 (645)
T PRK14559 369 PMQLVSLEDAGRTDVGR----QRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYF 444 (645)
T ss_pred cccceeEEEEEECCCCC----CCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHH
Confidence 33445788999999997 5999999987754321 0 0135699999999986 8899999999999888
Q ss_pred hcCCCCCCcHHHHHHHHHHHHhHHHhhc---CC--CCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCC
Q 018909 114 ANNPMLLDDPVKAYDSAFLTVNAELHSS---EI--DDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLS 188 (349)
Q Consensus 114 ~~~~~~~~~~~~~l~~a~~~~~~~l~~~---~~--~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls 188 (349)
.+.........+.|++++..+|+.|++. .. ....||||++++++.++++|++||||||+|++++++. .++||
T Consensus 445 ~~~~~~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~---l~QLT 521 (645)
T PRK14559 445 QQHWQDELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGG---LEQLT 521 (645)
T ss_pred HhhhcccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCe---EEEeC
Confidence 7543222234678999999999999762 11 3346999999999999999999999999999976654 58999
Q ss_pred CCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEec
Q 018909 189 HDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAV 268 (349)
Q Consensus 189 ~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~ 268 (349)
.||++.. ++.+.| ++.+.+.. +|.+ ..+||+||+...+ ..+
T Consensus 522 ~DHs~~~-----~lv~~G---i~~~~a~~-----------------~p~~----------~~LTrALG~~~~~----~l~ 562 (645)
T PRK14559 522 VDHEVGQ-----REIQRG---VEPQIAYA-----------------RPDA----------YQLTQALGPRDNS----AIQ 562 (645)
T ss_pred CCCCHHH-----HHHHhC---CCHHHHhc-----------------Cccc----------ceeeeccCCCCCC----ccc
Confidence 9999853 334444 22222222 2222 4699999997544 468
Q ss_pred ceEEEEEcCCCCeEEEEEcCCcccc--cCH---HHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCC
Q 018909 269 PEVSVVQLTPNHLFFVVASDGVFEF--LSS---QAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKD 343 (349)
Q Consensus 269 p~v~~~~l~~~d~fLiL~SDGl~d~--l~~---~ei~~iv~~~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~ 343 (349)
|++..+.+.++|. ||||||||||+ +.. +++..++....+++++++.|++.|+. +|++||||+|||++..
T Consensus 563 Pdi~~~~L~~gD~-lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~-----~gg~DNITvIvV~l~~ 636 (645)
T PRK14559 563 PDIQFLEIEEDTL-LLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQ-----YNGHDNITAILVRLKV 636 (645)
T ss_pred ceEEEEEcCCCCE-EEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-----cCCCCcEEEEEEEecc
Confidence 9999999998766 78999999994 544 45667777777899999999999998 7999999999999988
Q ss_pred CCCCC
Q 018909 344 FSNVS 348 (349)
Q Consensus 344 ~~~~~ 348 (349)
.++.+
T Consensus 637 ~p~~~ 641 (645)
T PRK14559 637 RPQLS 641 (645)
T ss_pred CCCCC
Confidence 87765
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=292.85 Aligned_cols=164 Identities=34% Similarity=0.533 Sum_probs=137.5
Q ss_pred CCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCC
Q 018909 146 TMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQT 225 (349)
Q Consensus 146 ~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~ 225 (349)
..+|||++|+++.+.+||+||.||||+++.|.+. ++.+|.||+|.+..|..||..+||+|..
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~Gk----AvdmS~DHKPEDevE~~RI~~AGG~vtl-------------- 389 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGK----AVDMSVDHKPEDEVETNRIHAAGGQVTL-------------- 389 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCCc----eeecccCCCcccHHHHHHHHhcCCeEee--------------
Confidence 4589999999999999999999999999996655 6999999999999999999999999854
Q ss_pred CCCCccCCCCCCeeeeecCccCc-ccccccCCCccccc--------CceEecceEEEEEcCCCCeEEEEEcCCcccccCH
Q 018909 226 WGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS 296 (349)
Q Consensus 226 ~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k~--------~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~ 296 (349)
.||++| +.|+|+|||..||+ ..|++-|+|+...|.+.|.|+||+|||||.+|+.
T Consensus 390 -----------------DGRVNGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsS 452 (542)
T KOG0699|consen 390 -----------------DGRVNGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSS 452 (542)
T ss_pred -----------------cceecCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccH
Confidence 344444 89999999998875 3589999999999999999999999999999999
Q ss_pred HHHHHHHHcc----CCHHHHHHHHHHHHHHHHH-hcCCCCCCeEEEEEEcCCC
Q 018909 297 QAVVDMAAKY----TDARDACAAIAGESYKLWL-ENENRTDDITIIIVHIKDF 344 (349)
Q Consensus 297 ~ei~~iv~~~----~~~~~~a~~L~~~a~~~~~-~~~g~~DNiTvIvv~~~~~ 344 (349)
++++++|+.. .....++..|++.++.-.- ..+.+.||+|+|++.|...
T Consensus 453 qeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 453 QEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 9999998753 3566666666666654100 0145689999999999743
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1e-35 Score=270.20 Aligned_cols=240 Identities=35% Similarity=0.559 Sum_probs=198.9
Q ss_pred eeEEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCC----CcHH
Q 018909 49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLL----DDPV 124 (349)
Q Consensus 49 ~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~----~~~~ 124 (349)
.+.++..+..|. |..|||++++...+ ..+..+|+|||||| |..+|+++++.+.+.+.+..... ..+.
T Consensus 5 ~~~~~~~~~~~~-----r~~neD~~~~~~~~--~~~~~~~~v~DG~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (255)
T smart00332 5 GLRYGLSSMQGV-----RKPMEDAHVITPDL--SDSGAFFGVFDGHG--GSEAAKFLSKNLPEILAEELIKHKDELEDVE 75 (255)
T ss_pred ceeEEEecCCCC-----CCCCcceEEEeccC--CCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Confidence 455666666665 99999999887542 25678999999999 99999999999998887654322 2478
Q ss_pred HHHHHHHHHHhHHHhhcCC---CCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHH
Q 018909 125 KAYDSAFLTVNAELHSSEI---DDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER 201 (349)
Q Consensus 125 ~~l~~a~~~~~~~l~~~~~---~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~r 201 (349)
+.|++++..+++.+..... ....+|||++++++..++++++|+||||+|+++.++ .+++|.||++.+..|..|
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~----~~~lt~dh~~~~~~~~~~ 151 (255)
T smart00332 76 EALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK----AVQLTEDHKPSNEDERAR 151 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc----eeEcCCCCCCcCHHHHHH
Confidence 8899999999999986321 235689999999999999999999999999998655 378999999999999999
Q ss_pred HHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEc-CCCC
Q 018909 202 VKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQL-TPNH 280 (349)
Q Consensus 202 i~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l-~~~d 280 (349)
|...++.+... .+|.+ ..+||++|+...+ +.+..+|++...++ .++|
T Consensus 152 i~~~~~~~~~~---------------------~~~~~----------~~lt~~~g~~~~~-~~i~~~p~~~~~~~~~~~d 199 (255)
T smart00332 152 IEAAGGFVING---------------------RVNGV----------LALSRAIGDFFLK-PYVSAEPDVTVVELTEKDD 199 (255)
T ss_pred HHHcCCEEECC---------------------eECCe----------EecccccCCHhhc-CCeEeeeEEEEEEecCCCc
Confidence 99999876421 11222 5699999998755 66789999999996 7766
Q ss_pred eEEEEEcCCcccccCHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Q 018909 281 LFFVVASDGVFEFLSSQAVVDMAAKYT---DARDACAAIAGESYKLWLENENRTDDITIIIV 339 (349)
Q Consensus 281 ~fLiL~SDGl~d~l~~~ei~~iv~~~~---~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv 339 (349)
. |||||||||++++++++.+++.... ++.++++.|++.|.. .+..||+|+|||
T Consensus 200 ~-ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~-----~~~~Dn~T~ivv 255 (255)
T smart00332 200 F-LILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALA-----RGSKDNITVIVV 255 (255)
T ss_pred E-EEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH-----cCCCCCeEEEEC
Confidence 6 8999999999999999999998765 599999999999998 789999999985
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.4e-36 Score=269.83 Aligned_cols=243 Identities=36% Similarity=0.581 Sum_probs=191.9
Q ss_pred EEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcC--cHHHHHHHHHHHHHHHhcCCC-CCCcHHHHH
Q 018909 51 EYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPM-LLDDPVKAY 127 (349)
Q Consensus 51 ~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~--G~~as~~a~~~l~~~~~~~~~-~~~~~~~~l 127 (349)
.++..+..|. |+.|||++++...... .+..+|+|||||||+ |..|++.+.+.+.+.+..... ....+...|
T Consensus 2 ~~~~~~~~g~-----r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l 75 (254)
T cd00143 2 SAGVSDKGGD-----RKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEAL 75 (254)
T ss_pred ceeeecCCCC-----CCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Confidence 3456666776 9999999998754211 267899999999953 444555555555444433221 234567889
Q ss_pred HHHHHHHhHHHhhcC---CCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHH
Q 018909 128 DSAFLTVNAELHSSE---IDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKV 204 (349)
Q Consensus 128 ~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~ 204 (349)
+++|..+++.+.... .....+|||++++++.+++++++|+||||+|+++++. .+++|.||++.++.+..|+..
T Consensus 76 ~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~----~~~lt~dh~~~~~~~~~~i~~ 151 (254)
T cd00143 76 RKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE----AVQLTKDHKPVNEEERERIEK 151 (254)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCc----eeEcCCCCCCcChHHHHHHHH
Confidence 999999999997632 2345689999999999999999999999999997775 489999999999899999999
Q ss_pred cCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEc-CCCCeEE
Q 018909 205 CGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQL-TPNHLFF 283 (349)
Q Consensus 205 ~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l-~~~d~fL 283 (349)
.++.+.. ...|.+ ..+||+||+..++ +++..+|++...++ +++|. |
T Consensus 152 ~~~~~~~---------------------~~~~~~----------~~~t~~lG~~~~~-~~~~~~~~~~~~~l~~~~d~-i 198 (254)
T cd00143 152 AGGRVSN---------------------GRVPGV----------LAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDF-L 198 (254)
T ss_pred cCCcEEe---------------------CEEcCc----------eeeccccCCcccc-CCEEcCCeEEEEEeCCCCcE-E
Confidence 8876420 011222 5799999999766 55688999999999 77776 8
Q ss_pred EEEcCCcccccCHHHHHHHHHccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 018909 284 VVASDGVFEFLSSQAVVDMAAKYT---DARDACAAIAGESYKLWLENENRTDDITIIIVHI 341 (349)
Q Consensus 284 iL~SDGl~d~l~~~ei~~iv~~~~---~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~ 341 (349)
||||||||+++++++|.+++.... +++++|+.|++.|.. .+..||+|+|+++|
T Consensus 199 ll~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~-----~~~~Dn~t~i~~~~ 254 (254)
T cd00143 199 ILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALR-----RGSHDNITVVVVRL 254 (254)
T ss_pred EEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHh-----CCCCCCEEEEEEeC
Confidence 999999999999999999998877 799999999999998 78999999999975
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=276.69 Aligned_cols=231 Identities=27% Similarity=0.454 Sum_probs=184.9
Q ss_pred CCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhc------------CC-C--------------
Q 018909 66 DKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELAN------------NP-M-------------- 118 (349)
Q Consensus 66 r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~------------~~-~-------------- 118 (349)
.+.-||...+... ...++.|+||||||| |..|++++.++|..++.. .. .
T Consensus 82 ~~~~edrv~~~~s--~~~~~~fvGIyDGhg--Gp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~ 157 (390)
T KOG0700|consen 82 GKAEEDRVSVAVS--EENGWLFVGIYDGHG--GPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWK 157 (390)
T ss_pred CCcccCcceeeee--ccCCeEEEEEecCCC--CccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhh
Confidence 3455777654422 247889999999999 999999999999887761 11 1
Q ss_pred -------CCCcHHHHHHHHHHHHhHHHhh-------cCCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEec--CCeE
Q 018909 119 -------LLDDPVKAYDSAFLTVNAELHS-------SEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKD--GNRI 182 (349)
Q Consensus 119 -------~~~~~~~~l~~a~~~~~~~l~~-------~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~--~~~~ 182 (349)
......++|.+||.++++.+.. .......+|+|+++.++.+..+||+|+|||||+|.... +..+
T Consensus 158 ~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~ 237 (390)
T KOG0700|consen 158 QLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWL 237 (390)
T ss_pred cccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeE
Confidence 1356788999999999999865 22333569999999999999999999999999996643 3336
Q ss_pred EEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCcccc
Q 018909 183 IAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAE 261 (349)
Q Consensus 183 ~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k 261 (349)
.++|||.||+..++.|++||+..+- .+|..+-....|+-| +.+||+|||..+|
T Consensus 238 ~A~qLS~dHn~~ne~Ev~Rir~eHP--------------------------dd~~~vv~~~~RvkG~L~vsRAfGd~~lK 291 (390)
T KOG0700|consen 238 VAVQLSTDHNASNEDEVRRIRSEHP--------------------------DDPHIVVNKHWRVKGILQVSRAFGDGYLK 291 (390)
T ss_pred EEEecChhhccccHHHHHHHHHhCC--------------------------CCcceEeeccceeeEEEEeeeeccceeec
Confidence 8999999999999999999997762 123333222336666 7999999998876
Q ss_pred --------------------cCceEecceEEEEEcCCCCeEEEEEcCCcccccCHHHHHHHHHccC----CHHHHHHHHH
Q 018909 262 --------------------KIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYT----DARDACAAIA 317 (349)
Q Consensus 262 --------------------~~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~~~~----~~~~~a~~L~ 317 (349)
+|.++++|+++..+|.+.|.||||+|||||++|+++|++.+|.... .-+.+|+.|+
T Consensus 292 ~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLI 371 (390)
T KOG0700|consen 292 WPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLI 371 (390)
T ss_pred chhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHH
Confidence 4679999999999999999999999999999999999999998842 3456899999
Q ss_pred HHHHHHHHh
Q 018909 318 GESYKLWLE 326 (349)
Q Consensus 318 ~~a~~~~~~ 326 (349)
+.|+..+.+
T Consensus 372 r~aL~~aak 380 (390)
T KOG0700|consen 372 RHALGRAAK 380 (390)
T ss_pred HHHHhhhhh
Confidence 999986544
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=7e-26 Score=202.04 Aligned_cols=253 Identities=24% Similarity=0.361 Sum_probs=175.1
Q ss_pred CCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCC---------------------------------C-------CCc
Q 018909 83 PNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPM---------------------------------L-------LDD 122 (349)
Q Consensus 83 ~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~---------------------------------~-------~~~ 122 (349)
.+..+|.+||||. |..+|-.|.+.+.+.+.+... + ..-
T Consensus 142 ~~~~~~slfdgha--gs~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 142 ADGALFSLFDGHA--GSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CcceeeeeecCCC--cchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 4678999999999 666666666666554432100 0 012
Q ss_pred HHHHHHHHHHHHhHHHhh-cCCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHH
Q 018909 123 PVKAYDSAFLTVNAELHS-SEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER 201 (349)
Q Consensus 123 ~~~~l~~a~~~~~~~l~~-~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~r 201 (349)
..-+|..||+..++.|.. .+.....+|||+++++.--+++|++|.||||++++|++++ ++||.+.+| +.||||
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndei----rplS~efTP--etERqR 293 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEI----RPLSKEFTP--ETERQR 293 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCe----eecccccCc--HHHHHH
Confidence 356789999999999876 3333345899999999999999999999999999998886 899999988 589999
Q ss_pred HHHcC--------CEEE---ee--------ccccCCCCCCCCCCCCCccCCCC--CCeeeee--cCc-cCcccccccCCC
Q 018909 202 VKVCG--------ARVL---SV--------DQVEGLKDPNIQTWGDEESQGGD--PPRLWVQ--NGM-YPGTAFTRSVGD 257 (349)
Q Consensus 202 i~~~g--------g~i~---~~--------~~~~~~~~~~~~~~~~~~~~~~~--p~r~~~~--~~~-~~g~~ltr~lG~ 257 (349)
++..+ +... .+ .+--.+++-+..+|+.+.-...+ ++=++-. +.+ +.-+.+||.|||
T Consensus 294 lQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGD 373 (493)
T KOG1323|consen 294 LQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGD 373 (493)
T ss_pred HHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCc
Confidence 99864 1111 11 11233566777888775443222 1111100 111 222789999999
Q ss_pred cccc--------cCceEecceEEEEEcCC----CCeEEEEEcCCcccccCHHHHHHHHHccC------CH---HHHHHHH
Q 018909 258 STAE--------KIGVVAVPEVSVVQLTP----NHLFFVVASDGVFEFLSSQAVVDMAAKYT------DA---RDACAAI 316 (349)
Q Consensus 258 ~~~k--------~~~v~~~p~v~~~~l~~----~d~fLiL~SDGl~d~l~~~ei~~iv~~~~------~~---~~~a~~L 316 (349)
..++ +|.+++.|++....+.. .|..|||+||||||+++++|+..++++.. +| ..+|+.|
T Consensus 374 H~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdl 453 (493)
T KOG1323|consen 374 HHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDL 453 (493)
T ss_pred ceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHH
Confidence 9876 57789999999988763 24459999999999999999999998743 33 2355666
Q ss_pred HHHHHHHHHh--------cCCCCCCeEEEEEEcCC
Q 018909 317 AGESYKLWLE--------NENRTDDITIIIVHIKD 343 (349)
Q Consensus 317 ~~~a~~~~~~--------~~g~~DNiTvIvv~~~~ 343 (349)
+..|.-.... .-++.|||||.||.+.-
T Consensus 454 va~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~ 488 (493)
T KOG1323|consen 454 VAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKY 488 (493)
T ss_pred HHHhcCccCCCceeccCCCcCCCCceEEEEEeccC
Confidence 6555432111 13668999999998853
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-25 Score=200.20 Aligned_cols=213 Identities=19% Similarity=0.332 Sum_probs=152.2
Q ss_pred CCCCCcceeeeeccccCCCCeEEEEEEcCCCcC---cHHHHHHHHHHH---HHHHhcCCCCCCcHHHHHHHHHHHHhHHH
Q 018909 65 PDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF---GTQCSNFVQQRL---VEELANNPMLLDDPVKAYDSAFLTVNAEL 138 (349)
Q Consensus 65 ~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~---G~~as~~a~~~l---~~~~~~~~~~~~~~~~~l~~a~~~~~~~l 138 (349)
+-+..||++++..+ ....+.|||||+||| |..++.|..+.+ .+.+++......+|...|.+++.++-.
T Consensus 87 ~~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~-- 160 (330)
T KOG1379|consen 87 VGKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS-- 160 (330)
T ss_pred CCCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh--
Confidence 35568999999865 577799999999998 888887766655 344445555566899999988876543
Q ss_pred hhcCCCCCCCCceEEEEEEe--CCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeecccc
Q 018909 139 HSSEIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVE 216 (349)
Q Consensus 139 ~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~ 216 (349)
+.....++||++++.+. +++||++|+|||...++|.+.... +.--+.|..+-
T Consensus 161 ---~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~--~S~~Q~H~FN~--------------------- 214 (330)
T KOG1379|consen 161 ---QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVF--RSPEQQHYFNT--------------------- 214 (330)
T ss_pred ---cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEE--cCchheeccCC---------------------
Confidence 22223478889888887 889999999999999997665422 11122233221
Q ss_pred CCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEEEEcCCcccccCH
Q 018909 217 GLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS 296 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~ 296 (349)
|+++-...- ....+++|. .-..++..+.++++|. |||+||||||+|.+
T Consensus 215 -------------------PyQLs~~p~-----~~~~~~~d~-------p~~ad~~~~~v~~GDv-IilATDGlfDNl~e 262 (330)
T KOG1379|consen 215 -------------------PYQLSSPPE-----GYSSYISDV-------PDSADVTSFDVQKGDV-IILATDGLFDNLPE 262 (330)
T ss_pred -------------------ceeeccCCc-----cccccccCC-------ccccceEEEeccCCCE-EEEecccccccccH
Confidence 222100000 012233333 2345788899999999 89999999999999
Q ss_pred HHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHh------------------cCCCCCCeEEEEEEc
Q 018909 297 QAVVDMAAK-----YTDARDACAAIAGESYKLWLE------------------NENRTDDITIIIVHI 341 (349)
Q Consensus 297 ~ei~~iv~~-----~~~~~~~a~~L~~~a~~~~~~------------------~~g~~DNiTvIvv~~ 341 (349)
++|.+++.. ..+++..|+.|++.|.++..+ .+|+.||||+||..+
T Consensus 263 ~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 263 KEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 999999964 347999999999999988632 367799999999753
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.84 E-value=7.8e-21 Score=168.01 Aligned_cols=181 Identities=22% Similarity=0.343 Sum_probs=105.5
Q ss_pred eeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcC--cHHHHHHHHHHHHHHHhcCCCCCCcH--HHHHHHH
Q 018909 55 LTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDP--VKAYDSA 130 (349)
Q Consensus 55 ~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~--G~~as~~a~~~l~~~~~~~~~~~~~~--~~~l~~a 130 (349)
.+++|. +..|||++.+... .+..+++||||+|+. |+.+|+.+++.+.+.+.+........ ...++.+
T Consensus 3 ~sh~~~-----~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~ 73 (212)
T PF13672_consen 3 RSHRGR-----GAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAI 73 (212)
T ss_dssp ----TT-----SSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred ccccCC-----CCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 456665 9999999996643 455677999999986 88999999999999998776443321 2233333
Q ss_pred HHHHhHHH------hhcCCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHH
Q 018909 131 FLTVNAEL------HSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKV 204 (349)
Q Consensus 131 ~~~~~~~l------~~~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~ 204 (349)
...+...+ ..........+||++++++.++.++++|+||||+|++.+++. ...++.+|.. +..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~---~~~l~~~~~~----~~~---- 142 (212)
T PF13672_consen 74 KKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGE---IQQLTDDHSG----EYP---- 142 (212)
T ss_dssp HHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTE---EEE-S---BH----HHH----
T ss_pred HHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCE---EEEcCCCccc----hhh----
Confidence 33333221 012233345799999999999999999999999988877775 4678888852 110
Q ss_pred cCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEE
Q 018909 205 CGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFV 284 (349)
Q Consensus 205 ~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLi 284 (349)
..++.+..... ....++..+++.++|. |+
T Consensus 143 ---------------------------------------------~~~~~~~~~~~-----~~~~~~~~~~~~~~d~-il 171 (212)
T PF13672_consen 143 ---------------------------------------------NQTRSLTGDDP-----EPDVQYGSIPLEEGDV-IL 171 (212)
T ss_dssp ---------------------------------------------HCTTSCCHHCC-----CTETEEEEEE--TT-E-EE
T ss_pred ---------------------------------------------hhhhccCcccc-----ccCCeEEEEEcCCCCE-EE
Confidence 01222222110 2233677788888888 78
Q ss_pred EEcCCcccccCHHH-HHHHHHcc
Q 018909 285 VASDGVFEFLSSQA-VVDMAAKY 306 (349)
Q Consensus 285 L~SDGl~d~l~~~e-i~~iv~~~ 306 (349)
|||||||+.+...+ +..++...
T Consensus 172 L~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 172 LCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp EE-HHHHTTS-HHHHHHHH----
T ss_pred EECcCccccCCCHHHHHHHhhhc
Confidence 99999999998655 66666553
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=2.3e-19 Score=179.60 Aligned_cols=245 Identities=21% Similarity=0.305 Sum_probs=189.3
Q ss_pred eeEEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCCCcHHHHHH
Q 018909 49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYD 128 (349)
Q Consensus 49 ~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~~~~~~~l~ 128 (349)
-..+|++-..|. |..+-=+.....+|.. .....|+.+||-+ -.....+++..+..++.++.....+-.+.|+
T Consensus 521 ~~t~Gv~~~~gq-----rnk~c~~~~~v~nf~~-~~~a~~g~~dgs~--n~~v~~~vq~~ma~~L~eev~~~~~et~~mr 592 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQ-----RNKVCSRAVWVENFFL-NPQATFGCFDGSR--NSRVLSLVQDTMASYLAEEVQLYGNETEQMR 592 (1081)
T ss_pred heeeccchhccc-----ccchhhhhhhhhhccc-CCcceEEEEcCCC--chhHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 344677777776 5544333332233332 4556899999999 8889999999998888876544444456699
Q ss_pred HHHHHHhHHHhhcCCCCCCCCceEEEEEEeC--------CEEEEEEeccccEEEEEecCCeEEEEeCCCCC-CCCChhHH
Q 018909 129 SAFLTVNAELHSSEIDDTMSGTTAITVLVVG--------DKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQ-TPFRKDEY 199 (349)
Q Consensus 129 ~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~~--------~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh-~~~~~~e~ 199 (349)
.+|...++++-.... .-|..++.+.+.. .++++||+|+|.++++++++. .++|+-. ...+++|.
T Consensus 593 ~~fl~~~rklg~~g~---~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~----~p~t~~~~~~v~~eE~ 665 (1081)
T KOG0618|consen 593 NTFLRLNRKLGEEGQ---VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKP----LPTTRSPMLEVDREEY 665 (1081)
T ss_pred HHHHHHhhhhhhhhc---cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCc----CcccccccccCCHHHH
Confidence 999999999855322 2355555555543 378999999999999987774 4445444 44589999
Q ss_pred HHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCC
Q 018909 200 ERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPN 279 (349)
Q Consensus 200 ~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~ 279 (349)
+||...+|.|...+. .||. ...||++|.+..- |++.++|+|..+.|.+.
T Consensus 666 ~RI~~~~g~i~ed~k---------------------------~ngv---t~~tR~iG~~~l~-P~v~p~Phv~~~~Lt~q 714 (1081)
T KOG0618|consen 666 KRIVDSKGFITEDNK---------------------------LNGV---TSSTRAIGPFSLF-PHVLPDPHVSVVILTEQ 714 (1081)
T ss_pred HHHHHhcCeecCCCe---------------------------eece---eeeeeeccccccc-ccccCCCceeeEecccC
Confidence 999999998843211 1222 4799999998744 57899999999999999
Q ss_pred CeEEEEEcCCcccccCHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCC
Q 018909 280 HLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDF 344 (349)
Q Consensus 280 d~fLiL~SDGl~d~l~~~ei~~iv~~~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~ 344 (349)
|+|||+++-++|++|+.+++++.+++..+|-.+|++|++.|.. .|..||++|+||++...
T Consensus 715 dE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~AqS-----Ygc~~nv~vlVv~l~~~ 774 (1081)
T KOG0618|consen 715 DEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDLAQS-----YGCAENVSVLVVRLNHL 774 (1081)
T ss_pred ceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHHHHh-----cccccCeeEEEEEeecc
Confidence 9999999999999999999999999888999999999999999 79999999999999754
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.76 E-value=1.5e-16 Score=138.55 Aligned_cols=184 Identities=14% Similarity=0.123 Sum_probs=126.0
Q ss_pred EEEEeeccccCCCCCCCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHH
Q 018909 51 EYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSA 130 (349)
Q Consensus 51 ~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~~~~~~~l~~a 130 (349)
.++.....+ ....-|.|.+... +++..+++|+|||| +..+|.+++..+...+.+....... +.+.
T Consensus 5 ~~~~~~~p~------~~~~GD~~~~~~~---~~~~~~~~v~Dg~G--~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~ 69 (193)
T smart00331 5 LIAQYYEDA------TQVGGDFYDVVKL---PEGRLLIAIADVMG--KGLAAALAMSMARSALRTLLSEGIS----LSQI 69 (193)
T ss_pred EEEEEEcch------HhcCccEEEEEEe---CCCeEEEEEEecCC--CChHHHHHHHHHHHHHHHHhhcCCC----HHHH
Confidence 445555555 5678898876543 24578999999999 5555555555555555443322222 4455
Q ss_pred HHHHhHHHhhcCCCCCCCCceEEEEEE--eCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCE
Q 018909 131 FLTVNAELHSSEIDDTMSGTTAITVLV--VGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGAR 208 (349)
Q Consensus 131 ~~~~~~~l~~~~~~~~~~GtT~~~~~i--~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~ 208 (349)
+..+|+.+.... ...+++|++++++ ..++++++|+||+|+|++++++.. ..++.+
T Consensus 70 l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~---~~~~~~------------------ 126 (193)
T smart00331 70 LERLNRAIYENG--EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGL---VEDLDD------------------ 126 (193)
T ss_pred HHHHHHHHHhcC--CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCe---EEEcCC------------------
Confidence 666777776542 2347999999988 678999999999999999844432 222222
Q ss_pred EEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEEEEcC
Q 018909 209 VLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASD 288 (349)
Q Consensus 209 i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLiL~SD 288 (349)
.++.+|... ..+++...+.+.++|. |+|+||
T Consensus 127 ------------------------------------------~~~~lG~~~------~~~~~~~~~~l~~gd~-l~l~TD 157 (193)
T smart00331 127 ------------------------------------------LGAPLGLEP------DVEVDVRELTLEPGDL-LLLYTD 157 (193)
T ss_pred ------------------------------------------CCceeeeCC------CCcceeEEEeeCCCCE-EEEECC
Confidence 122334332 2335677889999998 889999
Q ss_pred CcccccCHHHHHHHHHccC--CHHHHHHHHHHHHH
Q 018909 289 GVFEFLSSQAVVDMAAKYT--DARDACAAIAGESY 321 (349)
Q Consensus 289 Gl~d~l~~~ei~~iv~~~~--~~~~~a~~L~~~a~ 321 (349)
|||+.++.+++.+++.+.. +++++++.|.+.++
T Consensus 158 Gl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 158 GLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred CccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 9999999999999998753 68888888887664
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.63 E-value=2.9e-14 Score=147.25 Aligned_cols=189 Identities=21% Similarity=0.210 Sum_probs=126.6
Q ss_pred CCCCCcceeeeeccccCCCCeEEEEEEcCCCcCcHHHH---HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHhHHHhhc
Q 018909 65 PDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCS---NFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSS 141 (349)
Q Consensus 65 ~r~~nED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as---~~a~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~ 141 (349)
.+..+.|.+.+... +++..+++|+||+|+ |..|+ ..+.+.+.+.+... .++ ..++..+|..+...
T Consensus 563 g~~vsGD~y~~~~l---~~g~~~~~laDGmGh-G~~Aa~~S~~~~~ll~~~~~~g----~~~----~~ai~~lN~~L~~~ 630 (764)
T TIGR02865 563 GELVSGDSYSFGKL---SAGKYAVAISDGMGS-GPEAAQESSACVRLLEKFLESG----FDR----EVAIKTVNSILSLR 630 (764)
T ss_pred CCcccCceEEEEEE---CCCEEEEEEEcccCC-CHHHHHHHHHHHHHHHHHHHcC----CCH----HHHHHHHHHHHHhC
Confidence 38899999977542 256678999999994 44433 33333333333221 122 44666777766543
Q ss_pred CCCCCCCCceEEEEEEe--CCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCC
Q 018909 142 EIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLK 219 (349)
Q Consensus 142 ~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~ 219 (349)
.. ..+.+|+.+++++ .+++.++|+|+++.|+.+.+. ...++..+.|
T Consensus 631 ~~--~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~----v~~i~s~~lP-------------------------- 678 (764)
T TIGR02865 631 ST--DEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAK----VEVIRSSNLP-------------------------- 678 (764)
T ss_pred CC--CCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCE----EEEecCCCce--------------------------
Confidence 22 2357999888884 689999999999999986432 2344332211
Q ss_pred CCCCCCCCCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEEEEcCCcccccCHHH-
Q 018909 220 DPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQA- 298 (349)
Q Consensus 220 ~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~~e- 298 (349)
+|-.. ..+++....++.++|. |||+||||||..++.+
T Consensus 679 -----------------------------------lGil~------~~~~~~~~~~L~~GD~-Lll~SDGv~E~~~~~~~ 716 (764)
T TIGR02865 679 -----------------------------------IGILD------EVDVELVRKKLKNGDL-IVMVSDGVLEGEKEVEG 716 (764)
T ss_pred -----------------------------------eEecc------CCccceEEEEeCCCCE-EEEECCCCCcCCccccc
Confidence 11110 2345667789999998 8999999999876533
Q ss_pred ----HHHHHHc--cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 018909 299 ----VVDMAAK--YTDARDACAAIAGESYKLWLENENRTDDITIIIVHI 341 (349)
Q Consensus 299 ----i~~iv~~--~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~ 341 (349)
+.+++.. ..+|+++++.|++.+.+... +...||+|++++++
T Consensus 717 ~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~--~~~~DD~Tvlvirv 763 (764)
T TIGR02865 717 KVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS--GKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC--CCCCCCeEEEEEEe
Confidence 6777764 34899999999999987311 23589999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.53 E-value=1.2e-12 Score=113.64 Aligned_cols=181 Identities=18% Similarity=0.216 Sum_probs=109.8
Q ss_pred CCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHhHHHhhcCCCCCCCCceEEEEEEe--CC
Q 018909 83 PNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVV--GD 160 (349)
Q Consensus 83 ~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~ 160 (349)
++.+++.|+|+.|. |..|+ +....+...+........+ ..+.+..+|+.+...... ....+|++++.+. .+
T Consensus 2 ~~~~~~~v~D~~Gh-G~~aa-~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~-~~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSGH-GVSAA-LLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKG-DNRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESSS-SHHHH-HHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTT-TSTTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecCC-CHHHH-HHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhh-ccccceEEEEEecccce
Confidence 46778999999993 43333 3333333333221111112 344555666666431111 1256777777764 57
Q ss_pred EEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeee
Q 018909 161 KIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLW 240 (349)
Q Consensus 161 ~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~ 240 (349)
+++++|+|++++++++.++... ..+.....
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~--~~~~~~~~------------------------------------------------ 104 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREI--EQLESEGP------------------------------------------------ 104 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEE--EEETCSSB------------------------------------------------
T ss_pred EEEEeCCCCCCEEEEeccccce--eecccCcc------------------------------------------------
Confidence 8999999999999998755421 11111110
Q ss_pred eecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEEEEcCCcccccCHH-------HHHHHHHc--cCCHHH
Q 018909 241 VQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQ-------AVVDMAAK--YTDARD 311 (349)
Q Consensus 241 ~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~~-------ei~~iv~~--~~~~~~ 311 (349)
.+|-.. ..++....+++.++|. |+|+||||+|....+ ++.+++.. ..++++
T Consensus 105 -------------~lG~~~------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 164 (193)
T PF07228_consen 105 -------------PLGIFE------DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQE 164 (193)
T ss_dssp -------------BCSSSC------TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHH
T ss_pred -------------ceeeec------cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHH
Confidence 133321 1334566789999999 899999999998443 44567763 357999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEEEEcC
Q 018909 312 ACAAIAGESYKLWLENENRTDDITIIIVHIK 342 (349)
Q Consensus 312 ~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~ 342 (349)
+++.|.+.+.+ .......||+|+|+++++
T Consensus 165 ~~~~l~~~~~~--~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 165 IIDALLEAIDR--FGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHH--HTTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHH--hcCCCCCCceEEEEEEEC
Confidence 99999988887 333567899999999975
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.61 E-value=1.1e-05 Score=77.47 Aligned_cols=192 Identities=24% Similarity=0.247 Sum_probs=119.5
Q ss_pred cceeeeeccccCCCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCC-CCcHHHHHHHHHHHHhHHHhhcCCCCCCC
Q 018909 70 QDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPML-LDDPVKAYDSAFLTVNAELHSSEIDDTMS 148 (349)
Q Consensus 70 ED~~~v~~~~~~~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~ 148 (349)
=|.|-+... +.....++|.|..|. |..|+-. .......+...... ..++.. .+..+|+.++...... +
T Consensus 163 GD~yd~~~~---~~~~~~i~I~DvsG~-Gv~aal~-m~~~~~~~~~~~~~~~~~p~~----~l~~~n~~~~~~~~~~--~ 231 (367)
T COG2208 163 GDYYDFIQL---GEKRLRIGIGDVSGK-GVPAALL-MLMPKLALRLLLESGPLDPAD----VLETLNRVLKQNLEED--M 231 (367)
T ss_pred CceEEEEEE---CCcEEEEEEEeccCC-CHHHHHH-HHHHHHHHHHhhhcccCCHHH----HHHHHHHHHHhcccCC--c
Confidence 377755432 136788899999984 5555444 22222222222211 233333 3445555555432222 5
Q ss_pred CceEEEEEEe--CCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCC
Q 018909 149 GTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTW 226 (349)
Q Consensus 149 GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~ 226 (349)
-+|+...+++ .+.+.++|+|---.++++.++.. ....+.
T Consensus 232 f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~-~~~~l~-------------------------------------- 272 (367)
T COG2208 232 FVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI-EVEDLT-------------------------------------- 272 (367)
T ss_pred EEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc-eeEEcc--------------------------------------
Confidence 6677777764 57999999999999999776641 001111
Q ss_pred CCCccCCCCCCeeeeecCccCcccccccCCCcccccCceEecceEEEEEcCCCCeEEEEEcCCccc-------ccCHHHH
Q 018909 227 GDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFE-------FLSSQAV 299 (349)
Q Consensus 227 ~~~~~~~~~p~r~~~~~~~~~g~~ltr~lG~~~~k~~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d-------~l~~~ei 299 (349)
.....+|... ...+.+...++.++|. |+|.||||.+ .+..+..
T Consensus 273 -----------------------~~g~piG~~~------~~~~~~~~~~l~~gd~-lvl~tDGv~Ea~~~~~~~~~~~~~ 322 (367)
T COG2208 273 -----------------------ALGLPIGLLP------DYQYEVASLQLEPGDL-LVLYTDGVTEARNSDGEFFGLERL 322 (367)
T ss_pred -----------------------CCCceeeecC------CccchheeEEecCCCE-EEEEcCCeeeeecCCccEecHHHH
Confidence 1233344432 3455677788999888 8999999998 4566777
Q ss_pred HHHHHc--cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcC
Q 018909 300 VDMAAK--YTDARDACAAIAGESYKLWLENENRTDDITIIIVHIK 342 (349)
Q Consensus 300 ~~iv~~--~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~ 342 (349)
.+++.. ..+++++++.+.+...+..- .....||+|+|++++.
T Consensus 323 ~~~~~~~~~~~~~e~~~~i~~~l~~~~~-~~~~~DDiTll~lk~~ 366 (367)
T COG2208 323 LKILGRLLGQPAEEILEAILESLEELQG-DQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhC-CccccCceEEEEEEec
Confidence 777763 34789999988888877422 2345688999999985
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=87.96 E-value=5.2 Score=37.18 Aligned_cols=96 Identities=14% Similarity=0.065 Sum_probs=56.7
Q ss_pred CcceeeeeccccCCCCeEEEEEEc--CCCcCcHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHHHHHHHHhHHHhhcC
Q 018909 69 NQDSYCIKTHVQGSPNVHFFGVFD--GHGQFGTQCSNFVQQRLVEELANNP----MLLDDPVKAYDSAFLTVNAELHSSE 142 (349)
Q Consensus 69 nED~~~v~~~~~~~~~~~~~~V~D--G~Gg~G~~as~~a~~~l~~~~~~~~----~~~~~~~~~l~~a~~~~~~~l~~~~ 142 (349)
.-|.+.+..- +++...|-++| |||++|..||-.+...+...+.... ....++ .+.+..+|+.+.+..
T Consensus 150 ~GD~~d~~~l---~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p----~~~l~~lN~~l~~~~ 222 (303)
T PRK10693 150 PGLVLDIAAL---SDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPEL----GALLKQVNHLLRQAN 222 (303)
T ss_pred CccEEeeeec---CCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCH----HHHHHHHHHHHHhcC
Confidence 3465544321 24455555655 7777888887776665555555421 111233 344556777776542
Q ss_pred CCCCCCCceEEEEEEe--CCEEEEEEeccccEEE
Q 018909 143 IDDTMSGTTAITVLVV--GDKIYVANVGDSRAVI 174 (349)
Q Consensus 143 ~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l 174 (349)
... --|++.++++ .+++.++|.|-...++
T Consensus 223 ~~~---~~t~~~~~~d~~~~~l~~~~AGhp~~~~ 253 (303)
T PRK10693 223 LPG---QFPLLVGYYHRELKNLILVSAGLNATLN 253 (303)
T ss_pred CCc---eeeEEEEEEEcCCCeEEEEeCCCCCEEe
Confidence 222 2477777774 4689999999999884
No 21
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=41.88 E-value=22 Score=26.92 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=25.4
Q ss_pred EcCCCCeEEEEEcCCcccccCHHHHHHHHHcc
Q 018909 275 QLTPNHLFFVVASDGVFEFLSSQAVVDMAAKY 306 (349)
Q Consensus 275 ~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~~~ 306 (349)
-+.++|. |+|+.|||+-.+...+..+-++..
T Consensus 21 ~l~~~D~-vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 21 LLTEGDA-VLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred HhcccCe-EEEEcccchhhhcCcHHHHHHhcC
Confidence 4568899 889999999999888877777664
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=36.63 E-value=22 Score=25.49 Aligned_cols=17 Identities=47% Similarity=0.739 Sum_probs=13.2
Q ss_pred CCCeEEEEEcCCcccccC
Q 018909 278 PNHLFFVVASDGVFEFLS 295 (349)
Q Consensus 278 ~~d~fLiL~SDGl~d~l~ 295 (349)
+|.. +|+++||+|=.+.
T Consensus 26 ~G~R-llva~nGv~lEv~ 42 (72)
T PF09436_consen 26 PGHR-LLVASNGVFLEVR 42 (72)
T ss_pred CCcE-EEEecCcEEEEEe
Confidence 5666 7899999996554
No 23
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=31.02 E-value=2.5e+02 Score=22.17 Aligned_cols=45 Identities=16% Similarity=0.165 Sum_probs=34.0
Q ss_pred CceEecceEEEEEcCCCCeEEEEEcCCccc-------ccCHHHHHHHHHccC
Q 018909 263 IGVVAVPEVSVVQLTPNHLFFVVASDGVFE-------FLSSQAVVDMAAKYT 307 (349)
Q Consensus 263 ~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d-------~l~~~ei~~iv~~~~ 307 (349)
..++.+|++...+....+.|.|++..-.-+ .+++++|.-+..+..
T Consensus 37 ~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~g 88 (115)
T PRK06369 37 EIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQTG 88 (115)
T ss_pred EEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHHC
Confidence 346889999998888888899988877654 467777777665543
No 24
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=30.34 E-value=1.4e+02 Score=25.57 Aligned_cols=43 Identities=9% Similarity=0.244 Sum_probs=31.0
Q ss_pred CCeEEEEEcCCcc-----------cccCHHHHHHHHHcc----CCHHHHHHHHHHHHHH
Q 018909 279 NHLFFVVASDGVF-----------EFLSSQAVVDMAAKY----TDARDACAAIAGESYK 322 (349)
Q Consensus 279 ~d~fLiL~SDGl~-----------d~l~~~ei~~iv~~~----~~~~~~a~~L~~~a~~ 322 (349)
+|. ||..|.|+| |+|.++..-+.+... .-|.+.|..|++.-.+
T Consensus 71 DDT-vLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 71 DDT-VLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred CCe-eEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 455 778888887 556667777777653 3588899988887766
No 25
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=21.91 E-value=1.6e+02 Score=16.39 Aligned_cols=20 Identities=30% Similarity=0.508 Sum_probs=15.5
Q ss_pred EEeCCEEEEEEeccccEEEE
Q 018909 156 LVVGDKIYVANVGDSRAVIA 175 (349)
Q Consensus 156 ~i~~~~l~ianvGDSr~~l~ 175 (349)
+-.++.+|++-.+..|+.++
T Consensus 9 v~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EETTSEEEEEECCCTEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEC
Confidence 33788999999888887654
Done!