Query 018913
Match_columns 349
No_of_seqs 389 out of 1862
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 08:00:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s6b_A Methionine aminopeptida 100.0 3.9E-62 1.3E-66 475.1 25.8 267 72-343 38-307 (368)
2 2b3h_A Methionine aminopeptida 100.0 7E-60 2.4E-64 454.8 24.5 257 87-343 17-276 (329)
3 4fuk_A Methionine aminopeptida 100.0 6.1E-59 2.1E-63 450.1 24.1 251 92-342 2-263 (337)
4 3pka_A Methionine aminopeptida 100.0 2.6E-53 9E-58 401.8 26.7 239 99-343 4-242 (285)
5 3tb5_A Methionine aminopeptida 100.0 1.9E-48 6.6E-53 364.1 23.2 205 139-343 1-205 (264)
6 3mx6_A Methionine aminopeptida 100.0 5.9E-48 2E-52 360.7 22.2 205 139-343 5-209 (262)
7 1o0x_A Methionine aminopeptida 100.0 4.1E-47 1.4E-51 355.1 21.9 208 137-344 11-219 (262)
8 3tav_A Methionine aminopeptida 100.0 6.8E-47 2.3E-51 358.0 23.5 208 136-343 26-242 (286)
9 2gg2_A Methionine aminopeptida 100.0 5.9E-47 2E-51 353.9 22.0 205 139-343 1-207 (263)
10 1qxy_A Methionyl aminopeptidas 100.0 2.8E-46 9.6E-51 346.9 17.9 202 142-343 3-206 (252)
11 3q6d_A Proline dipeptidase; st 100.0 1.2E-43 4.2E-48 344.8 19.9 201 134-343 122-323 (356)
12 2zsg_A Aminopeptidase P, putat 100.0 2.5E-43 8.5E-48 342.5 21.0 200 135-343 126-326 (359)
13 1wy2_A XAA-Pro dipeptidase; st 100.0 3.4E-43 1.2E-47 341.6 21.7 201 135-344 120-321 (351)
14 4ege_A Dipeptidase PEPE; struc 100.0 6E-43 2.1E-47 343.1 20.4 209 126-344 134-344 (378)
15 1wn1_A Dipeptidase; prolidase, 100.0 8.3E-43 2.8E-47 339.4 19.6 200 135-344 124-324 (356)
16 4fkc_A XAA-Pro aminopeptidase; 100.0 1.1E-42 3.6E-47 340.6 17.8 203 134-344 142-345 (377)
17 2q8k_A Proliferation-associate 100.0 3E-42 1E-46 340.1 20.0 207 136-343 13-238 (401)
18 2v3z_A XAA-Pro aminopeptidase; 100.0 2.1E-40 7.2E-45 331.0 22.8 202 135-345 168-389 (440)
19 1xgs_A Methionine aminopeptida 100.0 6.7E-41 2.3E-45 318.3 18.1 187 146-343 1-191 (295)
20 3ig4_A XAA-Pro aminopeptidase; 100.0 1.5E-40 5.3E-45 330.5 20.9 198 135-344 164-374 (427)
21 1kp0_A Creatine amidinohydrola 100.0 1.2E-40 4.2E-45 328.3 18.4 210 135-344 150-362 (402)
22 3rva_A Organophosphorus acid a 100.0 4.9E-40 1.7E-44 328.8 21.7 204 135-344 152-389 (451)
23 3fm3_A Methionine aminopeptida 100.0 9E-40 3.1E-44 318.1 20.2 201 136-343 33-247 (358)
24 2nw5_A Methionine aminopeptida 100.0 1.2E-39 4.3E-44 316.8 19.8 194 143-343 42-249 (360)
25 2iw2_A XAA-Pro dipeptidase; me 100.0 4.1E-39 1.4E-43 326.0 21.9 204 136-344 181-418 (494)
26 1chm_A Creatine amidinohydrola 100.0 3.1E-39 1.1E-43 318.8 20.1 209 135-344 150-362 (401)
27 3cb6_A FACT complex subunit SP 100.0 1.3E-39 4.4E-44 325.1 17.1 205 135-344 170-395 (444)
28 3l24_A XAA-Pro dipeptidase; PI 100.0 4.3E-39 1.5E-43 325.7 20.1 203 135-344 152-386 (517)
29 3biq_A FACT complex subunit SP 100.0 1.1E-39 3.8E-44 327.8 15.4 205 134-343 169-403 (467)
30 1b6a_A Methionine aminopeptida 100.0 9.9E-39 3.4E-43 319.3 16.1 194 140-343 158-368 (478)
31 4b28_A Metallopeptidase, famil 100.0 1.9E-39 6.4E-44 326.1 8.9 203 134-344 221-434 (470)
32 3ctz_A XAA-Pro aminopeptidase 100.0 2.1E-36 7E-41 313.8 16.2 203 136-344 315-528 (623)
33 4b6a_t Probable metalloproteas 99.9 6.1E-21 2.1E-25 192.9 21.3 175 139-315 37-275 (614)
34 2jw6_A Deformed epidermal auto 97.8 6.4E-06 2.2E-10 57.0 1.6 47 5-58 2-48 (52)
35 2dj8_A Protein CBFA2T1; zinc f 97.7 2.3E-05 7.7E-10 56.0 3.3 41 11-58 14-54 (60)
36 2d8q_A BLU protein, zinc finge 97.7 3.2E-05 1.1E-09 57.1 4.1 42 12-60 15-56 (70)
37 2od1_A Protein CBFA2T1; zinc f 97.6 2.1E-05 7.2E-10 56.2 2.4 42 11-59 12-53 (60)
38 2odd_A Protein CBFA2T1; MYND z 97.4 4.7E-05 1.6E-09 55.0 2.1 42 11-59 16-57 (64)
39 4ege_A Dipeptidase PEPE; struc 96.6 0.012 4E-07 56.9 10.8 95 150-251 259-359 (378)
40 3q6d_A Proline dipeptidase; st 96.6 0.014 4.9E-07 55.5 11.3 95 150-251 239-339 (356)
41 1o0x_A Methionine aminopeptida 96.4 0.013 4.5E-07 53.5 9.7 99 150-251 131-251 (262)
42 3fm3_A Methionine aminopeptida 96.4 0.0068 2.3E-07 58.3 8.0 81 256-341 47-132 (358)
43 1wn1_A Dipeptidase; prolidase, 96.4 0.018 6E-07 55.1 10.6 95 150-251 239-339 (356)
44 3pka_A Methionine aminopeptida 96.3 0.014 4.9E-07 54.0 9.5 99 150-251 155-275 (285)
45 1wy2_A XAA-Pro dipeptidase; st 96.3 0.023 7.9E-07 54.1 11.1 95 150-251 236-336 (351)
46 3mx6_A Methionine aminopeptida 96.3 0.015 5.2E-07 53.1 9.1 85 150-237 122-210 (262)
47 2zsg_A Aminopeptidase P, putat 96.2 0.023 8E-07 53.9 10.6 95 150-251 242-342 (359)
48 2gg2_A Methionine aminopeptida 96.1 0.033 1.1E-06 50.7 10.5 97 150-251 120-240 (263)
49 4fkc_A XAA-Pro aminopeptidase; 96.0 0.045 1.5E-06 52.4 11.2 95 150-251 260-360 (377)
50 3tav_A Methionine aminopeptida 96.0 0.025 8.5E-07 52.4 9.0 97 150-251 149-275 (286)
51 3tb5_A Methionine aminopeptida 95.9 0.037 1.3E-06 50.4 10.0 98 151-251 119-238 (264)
52 3cb6_A FACT complex subunit SP 95.9 0.048 1.6E-06 53.4 11.4 97 150-251 307-420 (444)
53 3qww_A SET and MYND domain-con 95.8 0.0033 1.1E-07 62.0 2.5 42 12-60 49-92 (433)
54 1qxy_A Methionyl aminopeptidas 95.8 0.035 1.2E-06 50.2 9.1 99 150-251 118-239 (252)
55 3qwp_A SET and MYND domain-con 95.8 0.0043 1.5E-07 61.0 3.1 43 12-61 47-91 (429)
56 4fuk_A Methionine aminopeptida 95.6 0.032 1.1E-06 53.0 8.4 85 256-342 71-156 (337)
57 2b3h_A Methionine aminopeptida 95.6 0.036 1.2E-06 52.6 8.7 99 150-251 189-309 (329)
58 3biq_A FACT complex subunit SP 95.6 0.071 2.4E-06 52.6 11.1 98 149-251 313-425 (467)
59 2v3z_A XAA-Pro aminopeptidase; 95.6 0.11 3.7E-06 51.0 12.4 100 150-251 285-412 (440)
60 3s6b_A Methionine aminopeptida 95.5 0.038 1.3E-06 53.3 8.7 99 150-251 220-340 (368)
61 3n71_A Histone lysine methyltr 95.4 0.0068 2.3E-07 60.7 3.1 43 12-61 49-93 (490)
62 1kp0_A Creatine amidinohydrola 95.3 0.081 2.8E-06 51.0 10.3 99 150-251 272-381 (402)
63 3ig4_A XAA-Pro aminopeptidase; 94.9 0.14 4.8E-06 50.2 10.9 101 150-251 281-390 (427)
64 1xgs_A Methionine aminopeptida 94.9 0.16 5.4E-06 47.3 10.6 85 150-237 103-192 (295)
65 1chm_A Creatine amidinohydrola 94.7 0.19 6.3E-06 48.6 10.8 99 150-251 272-381 (401)
66 2nw5_A Methionine aminopeptida 94.4 0.08 2.7E-06 50.9 7.4 84 256-341 49-134 (360)
67 3rva_A Organophosphorus acid a 93.3 0.72 2.4E-05 45.5 12.2 37 151-187 271-307 (451)
68 1x4s_A Protein FON, zinc finge 93.3 0.032 1.1E-06 39.3 1.7 38 4-49 2-44 (59)
69 2q8k_A Proliferation-associate 92.9 0.41 1.4E-05 46.5 9.5 83 150-237 145-239 (401)
70 2yqq_A Zinc finger HIT domain- 92.6 0.076 2.6E-06 37.0 2.8 29 13-49 13-41 (56)
71 1b6a_A Methionine aminopeptida 91.6 0.28 9.6E-06 48.8 6.7 96 149-244 271-377 (478)
72 3l24_A XAA-Pro dipeptidase; PI 91.4 1 3.6E-05 45.1 10.7 37 150-186 267-303 (517)
73 3ctz_A XAA-Pro aminopeptidase 91.4 0.36 1.2E-05 49.6 7.4 97 150-250 439-542 (623)
74 4b28_A Metallopeptidase, famil 91.3 0.28 9.4E-06 48.7 6.3 96 150-251 345-450 (470)
75 2iw2_A XAA-Pro dipeptidase; me 90.7 0.98 3.3E-05 44.9 9.8 38 150-187 302-339 (494)
76 1lv3_A Hypothetical protein YA 73.9 1.5 5.2E-05 31.6 1.9 13 38-50 27-39 (68)
77 2e5r_A Dystrobrevin alpha; ZZ 54.6 2.5 8.7E-05 29.8 -0.1 47 4-58 1-55 (63)
78 4b6a_t Probable metalloproteas 54.1 15 0.0005 37.5 5.4 87 255-341 47-165 (614)
79 1jjd_A Metallothionein, SMTA; 54.0 6.4 0.00022 27.1 1.9 34 11-50 6-39 (55)
80 2w0t_A Lethal(3)malignant brai 50.3 5.1 0.00018 26.1 0.9 11 40-50 27-37 (43)
81 2lo3_A SAGA-associated factor 44.0 6.2 0.00021 25.5 0.5 15 11-25 16-30 (44)
82 3h0g_L DNA-directed RNA polyme 41.4 10 0.00035 26.8 1.4 21 10-30 19-45 (63)
83 2ki0_A DS119; beta-alpha-beta, 38.1 17 0.00057 21.8 1.7 24 244-267 4-27 (36)
84 2kfw_A FKBP-type peptidyl-prol 35.7 1.1E+02 0.0036 26.3 7.3 49 223-280 3-57 (196)
85 2l8e_A Polyhomeotic-like prote 31.8 14 0.00049 24.6 0.8 28 14-49 20-47 (49)
86 2y78_A Peptidyl-prolyl CIS-tra 31.3 33 0.0011 27.3 3.2 51 220-279 40-97 (133)
87 2vn1_A 70 kDa peptidylprolyl i 31.3 38 0.0013 26.6 3.5 52 220-280 31-90 (129)
88 1hxv_A Trigger factor; FKBP fo 30.1 32 0.0011 26.7 2.8 51 220-279 27-81 (113)
89 1x5w_A Zinc finger protein 64, 29.6 32 0.0011 23.1 2.5 14 48-61 50-63 (70)
90 3mhs_E SAGA-associated factor 29.4 20 0.0007 27.3 1.4 16 10-25 73-88 (96)
91 2pbc_A FK506-binding protein 2 29.4 27 0.00091 26.1 2.2 52 221-281 4-62 (102)
92 4dip_A Peptidyl-prolyl CIS-tra 28.9 45 0.0015 25.9 3.5 52 220-280 26-87 (125)
93 2cu8_A Cysteine-rich protein 2 28.6 36 0.0012 23.8 2.7 20 4-23 1-20 (76)
94 2aus_D NOP10, ribosome biogene 27.2 20 0.00067 25.1 0.9 22 13-34 6-28 (60)
95 3vhs_A ATPase wrnip1; zinc fin 27.0 14 0.00047 21.2 0.1 9 24-32 7-15 (29)
96 3gty_X Trigger factor, TF; cha 26.4 51 0.0018 31.9 4.1 42 174-239 130-171 (433)
97 1zfo_A LAsp-1; LIM domain, zin 24.6 26 0.00089 20.6 1.0 14 10-23 1-14 (31)
98 4gzn_C ZFP-57, zinc finger pro 24.4 25 0.00084 23.9 1.0 14 47-60 44-57 (60)
99 2d8v_A Zinc finger FYVE domain 24.1 35 0.0012 24.2 1.7 29 14-50 10-38 (67)
100 2jrp_A Putative cytoplasmic pr 23.7 17 0.00057 27.0 -0.0 32 14-45 20-57 (81)
101 4fc8_A Transcription protein R 23.7 22 0.00075 31.4 0.8 13 38-50 107-119 (219)
102 3pr9_A FKBP-type peptidyl-prol 23.2 85 0.0029 25.9 4.3 49 223-280 2-69 (157)
103 1twf_L ABC10-alpha, DNA-direct 23.0 27 0.00094 25.0 1.0 21 11-31 27-53 (70)
104 1yat_A FK506 binding protein; 21.5 93 0.0032 23.5 4.0 50 223-281 22-78 (113)
105 2apo_B Ribosome biogenesis pro 21.5 42 0.0014 23.4 1.7 43 13-59 7-50 (60)
106 1w26_A Trigger factor, TF; cha 21.2 1E+02 0.0034 29.7 5.0 45 172-240 131-175 (432)
107 2lgo_A FKBP; infectious diseas 20.8 1.1E+02 0.0037 24.0 4.4 50 223-281 40-96 (130)
108 2ppn_A FK506-binding protein 1 20.5 97 0.0033 23.0 3.9 50 223-281 16-72 (107)
No 1
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=3.9e-62 Score=475.14 Aligned_cols=267 Identities=40% Similarity=0.674 Sum_probs=250.2
Q ss_pred CCccccccchhcccCCCCCCCCCCCCcCCCccccCCCCCcccCCcCCCcccccCCCCCcCCCCccccccccCCHHHHHHH
Q 018913 72 SSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERM 151 (349)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~iKs~~EIe~~ 151 (349)
.|+...+|.| ++.+++||+|.|||+|||+++||++.||++|++|+|+.+|.|..+.......+|.|||++||+.|
T Consensus 38 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~m 112 (368)
T 3s6b_A 38 DPTNRKYWVY-----DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRI 112 (368)
T ss_dssp CTTCCGGGGG-----STTGGGGTTCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHH
T ss_pred CCCCCccccc-----ccccCCCCCCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHH
Confidence 3566778876 56789999999999999999999999999999999999998876654444568999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEE
Q 018913 152 RETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 231 (349)
Q Consensus 152 R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~i 231 (349)
|+|+++++++|+.+.+.++||+||.||++.+++++.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+|
T Consensus 113 R~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~i 192 (368)
T 3s6b_A 113 REACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINI 192 (368)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeceeCcEEeceeeeEEec---CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccc
Q 018913 232 DVTVYYKGVHGDLNETYFVG---NADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAI 308 (349)
Q Consensus 232 D~g~~~~GY~~D~~RT~~vG---~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGI 308 (349)
|+|++|+||++|++|||++| ++++++++++++++++++++++++|||++++||+++++++++++||.++++++||||
T Consensus 193 D~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~~GHGI 272 (368)
T 3s6b_A 193 DISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHGV 272 (368)
T ss_dssp EEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSCCEEEC
T ss_pred EEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccceeeCCC
Confidence 99999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 309 VIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 309 G~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
|+.+||.|.+.++.+++.+.+|++||||++||++.
T Consensus 273 G~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy 307 (368)
T 3s6b_A 273 GKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMIN 307 (368)
T ss_dssp SSSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEE
T ss_pred CccccCCCccccccCCCCCCEECCCCEEEEcCeEE
Confidence 99999999998765455678999999999998654
No 2
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=7e-60 Score=454.84 Aligned_cols=257 Identities=48% Similarity=0.789 Sum_probs=233.8
Q ss_pred CCCCCCCCCCCcCCCccc-cCCCCCcccCCcCCCcccccC--CCCCcCCCCccccccccCCHHHHHHHHHHHHHHHHHHH
Q 018913 87 QARTPKLPHFDWTGTLRP-YPISSKLTVPAYIELPDWALD--GTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLD 163 (349)
Q Consensus 87 ~~~~~~~~~~~~~g~~~p-~~~s~~~~vp~~i~~p~ya~~--g~~~~e~~~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~ 163 (349)
.+..++||+|.|+|.+|| +++++++.||++|++|+|+.. |++..+.......+|.|||++||+.||+|+++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~~~iKs~~EI~~mR~A~~ia~~al~ 96 (329)
T 2b3h_A 17 RGSHMLEDPYRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLD 96 (329)
T ss_dssp ---------CCCSSSCCCCCCCCCCCCCCTTSCCCGGGGSTTCCCHHHHHTTTCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcCCCcccCCccCCCCccCCccCCCcccCChhhcccccCCCchhhhcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999 999999999999999999987 77755443343468999999999999999999999999
Q ss_pred HHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEEeeeceeCcEEec
Q 018913 164 AAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGD 243 (349)
Q Consensus 164 ~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D 243 (349)
.+.+.++||+||.||++.+++++.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+||+|++|+||++|
T Consensus 97 ~~~~~i~pGvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY~sD 176 (329)
T 2b3h_A 97 VAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGD 176 (329)
T ss_dssp HHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEE
T ss_pred HHHHHhhCCCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccccccCcCCCCcccccc
Q 018913 244 LNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHCYSTEDTKQCLV 323 (349)
Q Consensus 244 ~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~v~~~~~ 323 (349)
++|||+||++++++++++++++++++++++++|||++++||+++++++++++||.++++++|||||+.+||.|.+.++..
T Consensus 177 ~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG~~~HE~P~i~~~~~ 256 (329)
T 2b3h_A 177 LNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAK 256 (329)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEECCSCCEEECSSSSSEEEEECCSSS
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCcccCCcCcccccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987644
Q ss_pred cCCCcccCCCcEEEEcCCce
Q 018913 324 VSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 324 ~~~~~~Le~Gmv~~le~g~~ 343 (349)
+..+.+|++||||++||+++
T Consensus 257 ~~~~~~L~~GMVftIEPgiy 276 (329)
T 2b3h_A 257 NKAVGVMKSGHVFTIEPMIC 276 (329)
T ss_dssp CCCCCBCCTTCEEEECCEEE
T ss_pred CCCCCEECCCCEEEEeCCcC
Confidence 44458999999999998764
No 3
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=6.1e-59 Score=450.15 Aligned_cols=251 Identities=42% Similarity=0.664 Sum_probs=228.9
Q ss_pred CCCCCCcCCCccccCCCCCcccCCcCCCcccccC--CCCCcC---------CCCccccccccCCHHHHHHHHHHHHHHHH
Q 018913 92 KLPHFDWTGTLRPYPISSKLTVPAYIELPDWALD--GTPKVE---------PNSDLQHVVEIKTPDQIERMRETCRIARE 160 (349)
Q Consensus 92 ~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~--g~~~~e---------~~~~~~~~r~iKs~~EIe~~R~Aa~ia~~ 160 (349)
.|++|.|||+|||+++||++.||++|++|+|+.. +.+..+ ........|.|||++||+.||+|++|+++
T Consensus 2 ~~~~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~ 81 (337)
T 4fuk_A 2 AMKTFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSRE 81 (337)
T ss_dssp CEECCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHH
T ss_pred CccCcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999964 333221 11222346899999999999999999999
Q ss_pred HHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEEeeeceeCcE
Q 018913 161 VLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240 (349)
Q Consensus 161 al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~~GY 240 (349)
+++.+++.++||+||.||+++++++++++|+++++++|.+||+++|+|.|++++|++|++++|++||+|+||+|+.|+||
T Consensus 82 a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY 161 (337)
T 4fuk_A 82 VLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGF 161 (337)
T ss_dssp HHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccccccCcCCCCccc
Q 018913 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHCYSTEDTKQ 320 (349)
Q Consensus 241 ~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~v~~ 320 (349)
++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.||+++++++|||||+.+|+.|.+.+
T Consensus 162 ~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p~~~~ 241 (337)
T 4fuk_A 162 HGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCH 241 (337)
T ss_dssp EEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEEEECC
T ss_pred EEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccccCCCcccCCCcEEEEcCCc
Q 018913 321 CLVVSFSCFAKTGKIVLWSWYW 342 (349)
Q Consensus 321 ~~~~~~~~~Le~Gmv~~le~g~ 342 (349)
+..++...+|+|||||++|||.
T Consensus 242 ~~~~~~~~~L~~GMV~TIEPgi 263 (337)
T 4fuk_A 242 YANNKSLGMMRPGHVFTIEPMI 263 (337)
T ss_dssp SCC---CCBCCTTCEEEECCEE
T ss_pred cccCCCCCEeCCCCEEEECCee
Confidence 7666677899999999998653
No 4
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=2.6e-53 Score=401.81 Aligned_cols=239 Identities=39% Similarity=0.574 Sum_probs=224.4
Q ss_pred CCCccccCCCCCcccCCcCCCcccccCCCCCcCCCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHH
Q 018913 99 TGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEI 178 (349)
Q Consensus 99 ~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei 178 (349)
.+++|||.+||.+.||++|++|.|+.++.... ..+|.|||++||+.||+|+++++++++.+.+.++||+||.||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el 77 (285)
T 3pka_A 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQE------GSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDEL 77 (285)
T ss_dssp CCCCCCCCCCCCCCCCTTSCCCTTTTSSSCSC------SCSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHH
T ss_pred CCCCcccccCCCCCCcccCCCCcccccCCCCc------ccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH
Confidence 36799999999999999999999998765321 258999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHH
Q 018913 179 DRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASR 258 (349)
Q Consensus 179 ~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~ 258 (349)
++.+++++.++|++++.++|.+||+++|+|.|+.++|+.|++++|++||+|+||+|+.|+||++|++|||++|+++++++
T Consensus 78 ~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~ 157 (285)
T 3pka_A 78 DRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHR 157 (285)
T ss_dssp HHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHH
T ss_pred HHHHHHHHHHcCCccccccccCCCCceEecccceeecCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHH
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccccccCcCCCCcccccccCCCcccCCCcEEEE
Q 018913 259 QLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLW 338 (349)
Q Consensus 259 ~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~l 338 (349)
+++++++++++++++++|||++++||+++++++++++||..+.+++|||||+.+||.|.+.++.+.+.+.+|++||||++
T Consensus 158 ~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~Gmv~ti 237 (285)
T 3pka_A 158 LLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTI 237 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEECCSSCEEBCSSSSSCSCEECSSCCTTCCCBCCTTBEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccCCCcccccCCCcccCCCcccCccCCCCCCccCCCCEEEE
Confidence 99999999999999999999999999999999999999998899999999999999999886533456789999999999
Q ss_pred cCCce
Q 018913 339 SWYWR 343 (349)
Q Consensus 339 e~g~~ 343 (349)
||+++
T Consensus 238 EPgiy 242 (285)
T 3pka_A 238 EPMIN 242 (285)
T ss_dssp CCEEE
T ss_pred cCEEE
Confidence 98754
No 5
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.9e-48 Score=364.12 Aligned_cols=205 Identities=25% Similarity=0.396 Sum_probs=197.4
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCC
Q 018913 139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 218 (349)
Q Consensus 139 ~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p 218 (349)
||.|||++||+.||+|++|++++++.+.+.++||+||.||++.++.++.++|+.++..+|.+||.++++|.|..++|+.|
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~H~~~ 80 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFP 80 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTEEECCCC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcccccCCCC
Confidence 68999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred CCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCc
Q 018913 219 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 298 (349)
Q Consensus 219 ~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~ 298 (349)
++++|++||+|+||+|+.|+||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.||.
T Consensus 81 ~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~ 160 (264)
T 3tb5_A 81 RKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYG 160 (264)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCE
T ss_pred CCccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 299 VVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 299 ~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
.+++++|||||+.+|+.|.+..+...+.+.+|+|||||++||++.
T Consensus 161 ~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy 205 (264)
T 3tb5_A 161 VVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVN 205 (264)
T ss_dssp ECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEE
T ss_pred eeeeceecCCCCCCccCCccCccccCCCCCCccCCcEEEEeeeEE
Confidence 999999999999999999998765566678999999999998653
No 6
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=5.9e-48 Score=360.68 Aligned_cols=205 Identities=33% Similarity=0.543 Sum_probs=195.8
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCC
Q 018913 139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 218 (349)
Q Consensus 139 ~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p 218 (349)
++.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++++++|.+||.++|+|.|+.++|+.|
T Consensus 5 ~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~p 84 (262)
T 3mx6_A 5 MIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIP 84 (262)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCC
T ss_pred cceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccccccCCCC
Confidence 78999999999999999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred CCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCc
Q 018913 219 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 298 (349)
Q Consensus 219 ~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~ 298 (349)
++++|++||+|+||+|+.|+||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++||.
T Consensus 85 ~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~ 164 (262)
T 3mx6_A 85 NDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYS 164 (262)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCE
T ss_pred CCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 299 VVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 299 ~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
.+.+++|||||+.+||.|.+.++...+.+.+|++||||++||++.
T Consensus 165 ~~~~~~GHgiG~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy 209 (262)
T 3mx6_A 165 VVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMIN 209 (262)
T ss_dssp ECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEE
T ss_pred cCCCccccccCCcccCCCcccccCCCCCCCEeCCCCEEEEeCEEE
Confidence 889999999999999999887653345678999999999999875
No 7
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=4.1e-47 Score=355.11 Aligned_cols=208 Identities=29% Similarity=0.470 Sum_probs=196.2
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccccc
Q 018913 137 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 216 (349)
Q Consensus 137 ~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~ 216 (349)
..+|+|||++||+.||+|++++.++++.+.+.++||+||.||++.+++.+.++|+.+++.+|.+||.++|+|+|+.++|+
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~n~~~~H~ 90 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHG 90 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCccccccccCCCcceEecccccccCC
Confidence 35999999999999999999999999999999999999999999999999999999887777889999999999999999
Q ss_pred CCCCcc-CCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Q 018913 217 IPDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 295 (349)
Q Consensus 217 ~p~~r~-L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~ 295 (349)
.|++++ |++||+|+||+|+.|+||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++
T Consensus 91 ~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~ 170 (262)
T 1o0x_A 91 LPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESV 170 (262)
T ss_dssp CCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHT
T ss_pred CCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 296 GFSVVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 296 G~~~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
||..+.+++|||||+.+||.|.+.++...+.+.+|+|||||++||++..
T Consensus 171 G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~ 219 (262)
T 1o0x_A 171 GFNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSE 219 (262)
T ss_dssp TCEECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEES
T ss_pred CCcccCCcccCcccccccCCCccCCCCCCCCCCccCCCCEEEECCEEEc
Confidence 9998899999999999999998875433346789999999999998753
No 8
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=6.8e-47 Score=357.99 Aligned_cols=208 Identities=27% Similarity=0.357 Sum_probs=196.9
Q ss_pred ccccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcc
Q 018913 136 LQHVV--EIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVI 213 (349)
Q Consensus 136 ~~~~r--~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~ 213 (349)
++++| .|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+++.+++|.+||+++++|.|+.+
T Consensus 26 i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~ 105 (286)
T 3tav_A 26 FGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICSSVNDQV 105 (286)
T ss_dssp TCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTBC
T ss_pred HHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcccccccCCCCCceEEecCccc
Confidence 34577 9999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred cccCCC-CccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 018913 214 CHGIPD-SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (349)
Q Consensus 214 ~H~~p~-~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~ 292 (349)
+|+.|+ +++|++||+|+||+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 106 ~H~~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~ 185 (286)
T 3tav_A 106 VHGIPSATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGT 185 (286)
T ss_dssp SCCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHH
T ss_pred cCCCCCCCcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----HHc--CCceeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 293 ----TMS--GFSVVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 293 ----~~~--G~~~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
+++ ||..+++++|||||+.+||.|.+.++...+.+.+|+|||||++||+++
T Consensus 186 ~~~~~~~~~g~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy 242 (286)
T 3tav_A 186 RAAEKQFDRAFGIVDGYGGHGIGRSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLT 242 (286)
T ss_dssp HHHHHHHTCCCEECTTCCEEECSSSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEE
T ss_pred HHHHHHhcCCCcccCCcccCcccccccCCccccCcCCCCCCCCcCCCCEEEEcCEEE
Confidence 999 999889999999999999999988653345678999999999998765
No 9
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=5.9e-47 Score=353.87 Aligned_cols=205 Identities=38% Similarity=0.583 Sum_probs=195.0
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH-HHHcCCCCCCCCCccCCceeeecCCCcccccC
Q 018913 139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEA-TITAGGYPSPLNYHFFPKSCCTSVNEVICHGI 217 (349)
Q Consensus 139 ~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~-~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~ 217 (349)
+|+|||++||+.||+|++++.++++.+.+.++||+||.||++.+++. +.++|++++.++|.+||+++|+|.|+.++|+.
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~~~~H~~ 80 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGI 80 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccccccCCC
Confidence 58999999999999999999999999999999999999999999999 88899999888888999999999999999999
Q ss_pred CCC-ccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Q 018913 218 PDS-RKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSG 296 (349)
Q Consensus 218 p~~-r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G 296 (349)
|++ ++|++||+|+||+|+.|+||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|
T Consensus 81 p~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G 160 (263)
T 2gg2_A 81 PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEG 160 (263)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTT
T ss_pred CCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 998 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 297 FSVVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 297 ~~~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
|..+.+++|||||+.+||.|.+.++...+.+.+|++||||++||++.
T Consensus 161 ~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~ 207 (263)
T 2gg2_A 161 FSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVN 207 (263)
T ss_dssp CEECSSCCEEECSSSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEE
T ss_pred CEECCCcccccCCcceecCCcccCccCCCCCCCcCCCCEEEEecEEE
Confidence 99889999999999999999987653344678999999999999764
No 10
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.8e-46 Score=346.92 Aligned_cols=202 Identities=25% Similarity=0.449 Sum_probs=190.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCc
Q 018913 142 IKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSR 221 (349)
Q Consensus 142 iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r 221 (349)
|||++||+.||+|++++.++++.+.+.++||+||.||++.+++.+.++|+++.+++|.+||+++|+|.|+.++|+.|+++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~ 82 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKR 82 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEECCCCCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCccccCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999876555557999999999999999999999
Q ss_pred cCCCCCeEEEeeeceeCcEEeceeeeEEecCCCH-HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcee
Q 018913 222 KLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADE-ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV 300 (349)
Q Consensus 222 ~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~-e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v 300 (349)
+|++||+|+||+|+.|+||++|++|||++|++++ ++++++++++++++++++++|||++++||+++++++++++||..+
T Consensus 83 ~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~ 162 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVI 162 (252)
T ss_dssp BCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEEC
T ss_pred CcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999988
Q ss_pred eccccccccccCcCCC-CcccccccCCCcccCCCcEEEEcCCce
Q 018913 301 MHNVWFAIVIHCYSTE-DTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 301 ~~~~GHGIG~~~he~P-~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
.+++|||||+.+||.| .+.++...+.+.+|++||||++||+..
T Consensus 163 ~~~~GHgiG~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~ 206 (252)
T 1qxy_A 163 KNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFIS 206 (252)
T ss_dssp TTCCEEECSSSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEE
T ss_pred CCccccccCcccccCCccccCCCCCCCCCCccCCCEEEEecEEE
Confidence 9999999999999999 886553334578999999999998753
No 11
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.2e-43 Score=344.77 Aligned_cols=201 Identities=21% Similarity=0.299 Sum_probs=189.1
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcc
Q 018913 134 SDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVI 213 (349)
Q Consensus 134 ~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~ 213 (349)
.....+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.++|+.+. +||+++++|.|..+
T Consensus 122 ~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~~~~-----~f~~iv~~g~n~~~ 196 (356)
T 3q6d_A 122 GLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSS-----SFDIIVASGLRSAL 196 (356)
T ss_dssp SHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEEEGGGGGC
T ss_pred hhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCCcC-----CCCCEEEEcCcccc
Confidence 3456799999999999999999999999999999999999999999999999999998753 58999999999999
Q ss_pred cccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 214 CHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 214 ~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
+|+.|++++|++||+|+||+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++
T Consensus 197 ~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~ 276 (356)
T 3q6d_A 197 PHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYIT 276 (356)
T ss_dssp TTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 294 MSGFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 294 ~~G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
+.||.. +.|.+|||||+.+||.|.+. .+++.+|+|||||++|||+.
T Consensus 277 ~~g~~~~~~h~~GHgiGl~~he~p~i~----~~~~~~l~~Gmv~tiEPgiy 323 (356)
T 3q6d_A 277 EKGYGEYFGHSTGHGIGLEIHEAPGLA----FRSDTVLEPGMAVTVEPGIY 323 (356)
T ss_dssp HTTCGGGCCSCSEEECSSSSSEEEEES----TTCCCBCCTTCEEEECCEEE
T ss_pred HcCCcccCCCCCcccCCCCcCcCCCCC----CCCCCCcCCCCEEEECCEEE
Confidence 999975 46889999999999999876 34578999999999999875
No 12
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=2.5e-43 Score=342.48 Aligned_cols=200 Identities=17% Similarity=0.255 Sum_probs=188.4
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
.+..+|+|||++||+.||+|+++++.+++.+.+.++||+||.||++.++..+.++|+.+ .+||+++++|.|..++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~~~-----~~f~~iv~~g~~~~~~ 200 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEG-----VAFDTIVASGCRSALP 200 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGGGGGST
T ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEEccccccc
Confidence 34568999999999999999999999999999999999999999999999999999874 2599999999999999
Q ss_pred ccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Q 018913 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (349)
Q Consensus 215 H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~ 294 (349)
|+.|++++|++||+|+||+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++
T Consensus 201 h~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~ 280 (359)
T 2zsg_A 201 HGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIRE 280 (359)
T ss_dssp TCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 295 SGFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 295 ~G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
.||.. +.|.+|||||+.+||.|.+. .+.+.+|+|||||++|||+.
T Consensus 281 ~g~~~~~~h~~GHgiGl~~he~p~i~----~~~~~~l~~gmv~tiEPgiy 326 (359)
T 2zsg_A 281 KGYGEFFGHSLGHGIGLEVHEGPAIS----FRNDSPLPENVVFTVEPGIY 326 (359)
T ss_dssp TTCGGGBCSCSEEECSSSSSEEEEES----TTCCCBCCTTBEEEECCEEE
T ss_pred cCCcccCCCCCccccCcccCCCCCcC----CCCCCCcCCCCEEEECCEEE
Confidence 99974 46899999999999999776 23578999999999999875
No 13
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=3.4e-43 Score=341.56 Aligned_cols=201 Identities=19% Similarity=0.300 Sum_probs=189.2
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
....+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+ .+||+++++|.|..++
T Consensus 120 ~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~-----~~f~~iv~~g~n~~~~ 194 (351)
T 1wy2_A 120 VIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEK-----PAFDTIIASGYRSALP 194 (351)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCCEEEEccccccc
Confidence 34578999999999999999999999999999999999999999999999999999875 2599999999999999
Q ss_pred ccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Q 018913 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (349)
Q Consensus 215 H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~ 294 (349)
|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++
T Consensus 195 H~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~ 274 (351)
T 1wy2_A 195 HGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAE 274 (351)
T ss_dssp TCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 295 SGFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 295 ~G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
.||.. +.|.+|||||+.+||.|.+. .+.+.+|+|||||++|||+..
T Consensus 275 ~g~~~~~~h~~GHgiGl~~hE~p~i~----~~~~~~l~~Gmv~tiEPgiy~ 321 (351)
T 1wy2_A 275 YGYGEYFNHSLGHGVGLEVHEWPRVS----QYDETVLREGMVITIEPGIYI 321 (351)
T ss_dssp TTCGGGCCSCSEEECSSSSSEEEEES----TTCCCBCCTTCEEEECCEEEE
T ss_pred cCCcccCCCCcccccCCCcCCCCccC----CCCCCCcCCCCEEEECCEEEe
Confidence 99975 46899999999999999775 345789999999999998753
No 14
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=6e-43 Score=343.07 Aligned_cols=209 Identities=18% Similarity=0.181 Sum_probs=192.0
Q ss_pred CCCCcCCCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCcee
Q 018913 126 GTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC 205 (349)
Q Consensus 126 g~~~~e~~~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v 205 (349)
+....+....+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+. +| +++
T Consensus 134 ~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-----~f-~iv 207 (378)
T 4ege_A 134 GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAEGHSAV-----AF-VIV 207 (378)
T ss_dssp TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEE-----EE-EEE
T ss_pred CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-----Ce-eEE
Confidence 334444444456799999999999999999999999999999999999999999999999999998752 47 689
Q ss_pred eecCCCcccccCCCCccCCCCCeEEEeeecee-CcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Q 018913 206 CTSVNEVICHGIPDSRKLEDGDIVNIDVTVYY-KGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREI 284 (349)
Q Consensus 206 ~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~-~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI 284 (349)
++|.|...+|+.|++++|++||+|+||+|+.| +||++|++|||++|++++++++++++++++++++++++|||++++||
T Consensus 208 ~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v 287 (378)
T 4ege_A 208 GSGPHGADPHHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVRPGVTAAQV 287 (378)
T ss_dssp EEGGGGGCTTCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHH
T ss_pred EeeCCCCccCCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 285 GEVINRHATMSGFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 285 ~~~i~~~~~~~G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
++++++++++.||.. +.|.+|||||+.+||.|.+. .+++.+|+|||||++|||+..
T Consensus 288 ~~~~~~~~~~~G~~~~~~h~~GHgiGl~~hE~P~i~----~~~~~~L~~Gmv~tiEPgiy~ 344 (378)
T 4ege_A 288 DAAARDVLADAGLAEYFVHRTGHGIGLCVHEEPYIV----AGNELPLVAGMAFSIEPGIYF 344 (378)
T ss_dssp HHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEEC----TTCCCBCCTTBEEEECCEEEE
T ss_pred HHHHHHHHHHcCCCCcCCCCCcccCCCCcCCCCccC----CCCCCccCCCCEEEECCEEEe
Confidence 999999999999985 57899999999999999886 235789999999999999854
No 15
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=8.3e-43 Score=339.43 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=187.5
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
....+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++ +.+ .+||+++++|.|..++
T Consensus 124 ~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-~~~-----~~f~~iv~~g~n~~~~ 197 (356)
T 1wn1_A 124 LIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL-SDG-----IAFEPIVASGENAANP 197 (356)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH-SSE-----ESSCCEEEEGGGGGCT
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh-CcC-----CCCCcEEEEecccccc
Confidence 3456899999999999999999999999999999999999999999999999988 653 2589999999999999
Q ss_pred ccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Q 018913 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (349)
Q Consensus 215 H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~ 294 (349)
|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++
T Consensus 198 H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~ 277 (356)
T 1wn1_A 198 HHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISK 277 (356)
T ss_dssp TCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHT
T ss_pred cCCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 295 SGFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 295 ~G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
.||.. +.|.+|||||+.+||.|.+. .+.+.+|+|||||++|||+..
T Consensus 278 ~g~~~~~~h~~GHgiGl~~he~p~i~----~~~~~~l~~Gmv~tiEPgiy~ 324 (356)
T 1wn1_A 278 AGYGEYFIHRTGHGLGLDVHEEPYIG----PDGEVILKNGMTFTIEPGIYV 324 (356)
T ss_dssp TTCGGGCCSCSEEECSSSSSEEEEES----TTCCCBCCTTCEEEECCEEEE
T ss_pred cCCcccCCCCCcccCCCccCCCcccC----CCCCCCcCCCCEEEECCeeEe
Confidence 99974 57899999999999999876 245789999999999999753
No 16
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=1.1e-42 Score=340.62 Aligned_cols=203 Identities=18% Similarity=0.186 Sum_probs=187.5
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcc
Q 018913 134 SDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVI 213 (349)
Q Consensus 134 ~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~ 213 (349)
..+..+|+|||++||+.||+|++++.+++..+.+.++||+||.||++.++..+.+++... +.+|++++++|.|..+
T Consensus 142 ~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~----~~~f~~iv~~G~n~~~ 217 (377)
T 4fkc_A 142 PVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGAD----DVSFEPIVASGPNGAN 217 (377)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCC----EESSCCEEEEGGGGGC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCC----CcccCccccccccccc
Confidence 345678999999999999999999999999999999999999999999998888764322 2358999999999999
Q ss_pred cccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 214 CHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 214 ~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
+|+.|++++|++||+|++|+|+.|+||++|++|||++|++++++++++++++++++++++++|||+++++|+++++++++
T Consensus 218 ~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~ 297 (377)
T 4fkc_A 218 PHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIIS 297 (377)
T ss_dssp TTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCc-eeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 294 MSGFS-VVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 294 ~~G~~-~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
+.||. .+.+++|||||+.+||.|.+. .+++.+|+|||||++|||+..
T Consensus 298 ~~g~~~~~~h~~GHgiGl~~hE~P~i~----~~~~~~L~~Gmv~tiEPgiy~ 345 (377)
T 4fkc_A 298 KYGYGEYFIHRTGHGLGIDVHEEPYIS----PGNKKILKDGMVFTIEPGIYL 345 (377)
T ss_dssp HTTCTTTCCSCSEEECSSSSSEEEEEC----SSCCCBCCTTCEEEECCEEEE
T ss_pred HhcccccCCCCCeEeCCCccccCCccc----CCCCCEeCCCCEEEECCeeEE
Confidence 99997 467899999999999999876 345789999999999998753
No 17
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=3e-42 Score=340.11 Aligned_cols=207 Identities=18% Similarity=0.185 Sum_probs=183.1
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCC----CCccCCceeeecCCC
Q 018913 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPL----NYHFFPKSCCTSVNE 211 (349)
Q Consensus 136 ~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l----~y~~fp~~v~~g~n~ 211 (349)
...+|.|||++||+.||+|++|++++++.+.+.++||+||.||++.+++++.++|+ +.+. .|.+||..+|+|+|+
T Consensus 13 v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga-~~~~~~~~~~~g~~f~~~vS~N~ 91 (401)
T 2q8k_A 13 EQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETG-KIFKKEKEMKKGIAFPTSISVNN 91 (401)
T ss_dssp -CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHH-TSSTTCTTCCEEEEEEEEEEETT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-hhhcccccccCCCCCCcEEeCCc
Confidence 34689999999999999999999999999999999999999999999999999876 2222 234555557888999
Q ss_pred cccccCC--CC--ccCCCCCeEEEeeeceeCcEEeceeeeEEec-----CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Q 018913 212 VICHGIP--DS--RKLEDGDIVNIDVTVYYKGVHGDLNETYFVG-----NADEASRQLVQCTYECLEKAISIVKPGVRFR 282 (349)
Q Consensus 212 ~~~H~~p--~~--r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG-----~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~ 282 (349)
+++|++| ++ ++|++||+|+||+|+.|+||++|++|||+|| +++++++++++++++|++++|+++|||++++
T Consensus 92 ~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~ 171 (401)
T 2q8k_A 92 CVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNT 171 (401)
T ss_dssp EEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHH
T ss_pred ccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence 9999998 53 8999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCceeeccccccccccCcCCCC--ccccc----ccCCCcccCCCcEEEEcCCce
Q 018913 283 EIGEVINRHATMSGFSVVMHNVWFAIVIHCYSTED--TKQCL----VVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 283 eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~--v~~~~----~~~~~~~Le~Gmv~~le~g~~ 343 (349)
||+++++++++++||+++++++|||||+.+||.|. +.++. ..+...+|++||||++||+.+
T Consensus 172 dI~~ai~~~~~~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~ 238 (401)
T 2q8k_A 172 QVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVS 238 (401)
T ss_dssp HHHHHHHHHHHTTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceE
Confidence 99999999999999999999999999999999996 33221 012467999999999988665
No 18
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=2.1e-40 Score=331.00 Aligned_cols=202 Identities=21% Similarity=0.286 Sum_probs=185.0
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
.+..+|+|||++||+.||+|++++.+++..+++.++||+||.||++.++..++++|+.. .+||+++++|.|..++
T Consensus 168 ~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~-----~~f~~iv~~G~n~~~~ 242 (440)
T 2v3z_A 168 VVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCIL 242 (440)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----CCCCCeEEEcCccccc
Confidence 34568999999999999999999999999999999999999999999999999999863 2599999999999999
Q ss_pred ccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 215 H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
|+.|++++|++||+|+||+|+.|+||++|++|||++ |+++++++++|++++++++++++++|||++++||++++++++.
T Consensus 243 H~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~ 322 (440)
T 2v3z_A 243 HYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMV 322 (440)
T ss_dssp TCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999986
Q ss_pred H----cCC--------------c-eeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCceee
Q 018913 294 M----SGF--------------S-VVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRAV 345 (349)
Q Consensus 294 ~----~G~--------------~-~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~~ 345 (349)
+ .|+ . .+.|.+|||||+.+||.|.+.. +.+.+|+|||||++|||+...
T Consensus 323 ~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~~----~~~~~L~~Gmv~tiEPgiy~~ 389 (440)
T 2v3z_A 323 SGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQ----DRSRILEPGMVLTVAPGLYIA 389 (440)
T ss_dssp HHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCCG----GGCCCCCTTCEEEECCEEEEC
T ss_pred hhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcCC----CCCCccCCCCEEEECCEEEeC
Confidence 4 443 3 2567899999999999998763 246899999999999988653
No 19
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=6.7e-41 Score=318.26 Aligned_cols=187 Identities=25% Similarity=0.379 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCC---Ccc
Q 018913 146 DQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SRK 222 (349)
Q Consensus 146 ~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~---~r~ 222 (349)
+||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|++|+ ||.+ +|.|+.++|++|+ +++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~------fp~~--vs~n~~~~H~~p~~~~~~~ 72 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKPA------FPVN--LSINEIAAHYTPYKGDTTV 72 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEES------SCCE--EEETTEEECCCCCTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCCC------CCcE--EeeCCccccccCCCCCCcc
Confidence 4899999999999999999999999999999999999999999999874 8854 4689999999996 799
Q ss_pred CCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeec
Q 018913 223 LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMH 302 (349)
Q Consensus 223 L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~ 302 (349)
|++||+|+||+|+.|+||++|++|||+||+ ++++++++++++++++++++|||++++||+++++++++++||+++++
T Consensus 73 L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~~~ 149 (295)
T 1xgs_A 73 LKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVN 149 (295)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEECTT
T ss_pred ccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEECC
Confidence 999999999999999999999999999997 78899999999999999999999999999999999999999999999
Q ss_pred ccccccc-ccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 303 NVWFAIV-IHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 303 ~~GHGIG-~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
++||||| +.+||.|.+.++...+.+.+|+|||||++||+.+
T Consensus 150 ~~GHgIG~l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~ 191 (295)
T 1xgs_A 150 LSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT 191 (295)
T ss_dssp CCEEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE
T ss_pred CcCCCCCCcccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE
Confidence 9999998 6999999987764333378999999999999765
No 20
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-40 Score=330.47 Aligned_cols=198 Identities=16% Similarity=0.237 Sum_probs=182.2
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
.+..+|+|||++||+.||+|+++++++++.+++.++||+||.||++.++..+.++|+.. .+||++|++|.|..++
T Consensus 164 ~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~-----~~f~~ivasG~n~~~~ 238 (427)
T 3ig4_A 164 NICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKH-----HAFNTILASGKNATVL 238 (427)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEECcccccc
Confidence 34578999999999999999999999999999999999999999999999999999853 2599999999999999
Q ss_pred ccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 215 H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
|+.|++++|++||+|+||+|+.|+||++|+||||+| |+++++++++|++++++++++++++|||++++||++++++++.
T Consensus 239 H~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~ 318 (427)
T 3ig4_A 239 HYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLA 318 (427)
T ss_dssp TCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHH
T ss_pred ccCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred Hc----CC-------c-eeeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 294 MS----GF-------S-VVMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 294 ~~----G~-------~-~v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
+. |+ . .+.|.+|||||+.+|+.|. ..+.+|+|||||++|||+..
T Consensus 319 ~~~~~~G~~~~~~~~~~~~~Hg~GH~iGl~vhe~~~-------~~~~~L~~GMV~tiEPgiy~ 374 (427)
T 3ig4_A 319 EGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVGT-------YKDRVLEEGMVITIEPGLYI 374 (427)
T ss_dssp HHHHHHTSCSSGGGGGGTCCSCSCCBCSSSSSCCCC-------CTTCBCCTTCEEEECCEEEE
T ss_pred HhHhhcCCccCcchhhccCCCCCCCcCCcCCCcCCC-------CCCCEeCCCCEEEECCEEEE
Confidence 75 54 2 2467899999999998764 24688999999999999764
No 21
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.2e-40 Score=328.31 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=186.4
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCC-CCCccCCceeeecCCCcc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSP-LNYHFFPKSCCTSVNEVI 213 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~-l~y~~fp~~v~~g~n~~~ 213 (349)
.+..+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+.+ ..++.++.++++|.|..+
T Consensus 150 ~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv~~g~n~~~ 229 (402)
T 1kp0_A 150 PVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSGINTDG 229 (402)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcccccCcccccCccceeeccccccc
Confidence 3456899999999999999999999999999999999999999999999999988764322 123445568999999999
Q ss_pred cccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 214 CHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 214 ~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
+|+.|++++|++||+|+||+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++
T Consensus 230 ~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~ 309 (402)
T 1kp0_A 230 AHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYR 309 (402)
T ss_dssp TTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceee-ccccccccccCcCCCCcccc-cccCCCcccCCCcEEEEcCCcee
Q 018913 294 MSGFSVVM-HNVWFAIVIHCYSTEDTKQC-LVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 294 ~~G~~~v~-~~~GHGIG~~~he~P~v~~~-~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
+.||..+. +.+|||||+.+|+.|..... ...+.+.+|+|||||++|||+..
T Consensus 310 ~~G~~~~~~~~~GHgiG~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~ 362 (402)
T 1kp0_A 310 ZWDLLRYRTFGYGHSFGVLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMB 362 (402)
T ss_dssp HTTCGGGBCSCSCBBCEEEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEE
T ss_pred HcCCCeecCCCcccccCCccccCCcccCcccCCCCCCccCCCcEEEECCceee
Confidence 99998654 56799999999998753210 12345789999999999998864
No 22
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=4.9e-40 Score=328.84 Aligned_cols=204 Identities=16% Similarity=0.156 Sum_probs=177.7
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
.+..+|+|||++||+.||+|+++++++++.+++.++||+||.||++.+...+ ..|+. +.+||++|++|.|.+++
T Consensus 152 ~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~~g~~-----~~~f~~IVasG~naa~~ 225 (451)
T 3rva_A 152 YLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-RQGDN-----DVPYTSIVALNEHASIL 225 (451)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCTT-----TSSSCCEEEEGGGGGCT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-HcCCC-----cCCcCcEEEECCccccc
Confidence 3456899999999999999999999999999999999999999998776654 33432 23599999999999999
Q ss_pred ccCCCCcc-CCCCCeEEEeeeceeCcEEeceeeeEEecCC--CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 018913 215 HGIPDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNA--DEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRH 291 (349)
Q Consensus 215 H~~p~~r~-L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~--~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~ 291 (349)
|+.|++++ +++||+|+||+|+.|+||++|+||||++|++ +++++++|++++++++++++++|||++++||+++++++
T Consensus 226 H~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~ 305 (451)
T 3rva_A 226 HYMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDG 305 (451)
T ss_dssp TCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 99999885 6999999999999999999999999999987 78999999999999999999999999999999999887
Q ss_pred HH-----------------HcCC-c-eeeccccccccccCcCCCCccccc------------ccCCCcccCCCcEEEEcC
Q 018913 292 AT-----------------MSGF-S-VVMHNVWFAIVIHCYSTEDTKQCL------------VVSFSCFAKTGKIVLWSW 340 (349)
Q Consensus 292 ~~-----------------~~G~-~-~v~~~~GHGIG~~~he~P~v~~~~------------~~~~~~~Le~Gmv~~le~ 340 (349)
+. +.|+ . .+.|.+|||||+.+||.|.+.+.. ......+|+|||||++||
T Consensus 306 i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~~~~~~~g~~~~~~~~~~~l~~~~~L~~GMV~TIEP 385 (451)
T 3rva_A 306 IAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEP 385 (451)
T ss_dssp HHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTTTBSSTTCCBCCCCTTCTTCCCCCBCCTTCEEEECC
T ss_pred HHHHHHhcCCccccHHHHHhcCcccccCCCCCcccccCCcccCccccccccccccccccccccCCCCCCcCCCCEEEECC
Confidence 75 3444 1 367889999999999999875421 013468999999999999
Q ss_pred Ccee
Q 018913 341 YWRA 344 (349)
Q Consensus 341 g~~~ 344 (349)
|+..
T Consensus 386 GiY~ 389 (451)
T 3rva_A 386 GLYF 389 (451)
T ss_dssp EEEC
T ss_pred EEeE
Confidence 9875
No 23
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=100.00 E-value=9e-40 Score=318.12 Aligned_cols=201 Identities=18% Similarity=0.120 Sum_probs=182.9
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccc
Q 018913 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (349)
Q Consensus 136 ~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H 215 (349)
...+|.+|+++||+.||+|++|++++++.+.+.++||+||.||++.+++++++.|+.+++.+| +|| +|+|+|+.++|
T Consensus 33 ~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~-~FP--~ciSvN~~v~H 109 (358)
T 3fm3_A 33 NMEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGI-GFP--AGMSMNSCAAH 109 (358)
T ss_dssp SCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGE-EEE--EEEEETTEEEC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCC-CCC--cEEeeCCEEEe
Confidence 346889999999999999999999999999999999999999999999999999999876654 899 78899999999
Q ss_pred cCC----CCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 018913 216 GIP----DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRH 291 (349)
Q Consensus 216 ~~p----~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~ 291 (349)
++| ++++|++||+|+||+|+.++||++|++|||.||+. ..++++++++++++++++++||++..+|+.+++++
T Consensus 110 g~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~---~~~l~~~~~~al~aai~~~~pG~~~~dig~ai~~v 186 (358)
T 3fm3_A 110 YTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKEN---LEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEV 186 (358)
T ss_dssp CCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGG---GHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHH
T ss_pred cCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEecccccc---chhHHHHHHHHHHHHHHhhhcCCccccccHHHHHH
Confidence 999 47899999999999999999999999999999864 45678899999999999999999999999999999
Q ss_pred HHHcCCce---------eeccccccccc-cCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 292 ATMSGFSV---------VMHNVWFAIVI-HCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 292 ~~~~G~~~---------v~~~~GHGIG~-~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
++++|+++ ++.++|||||. .+|+.|.|+++ .++...+|++||||++||..+
T Consensus 187 ~~~~~~~v~~~~~~~~~v~~~~GHgiG~~~~he~~~ip~~-~~~~~~~le~GmV~tIEP~is 247 (358)
T 3fm3_A 187 ISSYEVEIGGRMWPIRPISDLHGHSISQFRIHGGISIPAV-NNRDTTRIKGDSFYAVETFAT 247 (358)
T ss_dssp HTTCEEECSSSEEECEECTTCCEEEEBTTBSCCSCEECSS-CCCCCCBCCSSEEEEEEEEEE
T ss_pred HhhccceeccccccccccccccccccCCccccCCCccCcc-CCCCCcEEeeeeeEEeeeeee
Confidence 99998654 57899999997 78999999887 455678999999999998654
No 24
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=1.2e-39 Score=316.75 Aligned_cols=194 Identities=20% Similarity=0.124 Sum_probs=179.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCC---
Q 018913 143 KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD--- 219 (349)
Q Consensus 143 Ks~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~--- 219 (349)
.|++||+.||+|++|++++++.+.+.++||+||.||++.+++.+.++|+.+. ..+.+||++ +|.|+.++|++|+
T Consensus 42 ~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~-~~~~aFpt~--~s~N~~~~H~~P~~~d 118 (360)
T 2nw5_A 42 TESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-NNGIGFPAG--MSMNSCAAHYTVNPGE 118 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-GGGEEEEEE--EEETTEEECCCCCTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc-cCccccCce--eeccccccCCCCCccc
Confidence 4999999999999999999999999999999999999999999999988765 556689965 5899999999998
Q ss_pred -CccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC-
Q 018913 220 -SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF- 297 (349)
Q Consensus 220 -~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~- 297 (349)
+++|++||+|+||+|+.++||++|++|||+++ ++++++++++++|++++++++|||++++||+++++++++++||
T Consensus 119 ~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~~ 195 (360)
T 2nw5_A 119 QDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVE 195 (360)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEE
T ss_pred CCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc
Confidence 78999999999999999999999999999994 6899999999999999999999999999999999999999986
Q ss_pred --------ceeeccccccccc-cCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 298 --------SVVMHNVWFAIVI-HCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 298 --------~~v~~~~GHGIG~-~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
..+.+++|||||+ .+||.|.|.++ ..+.+.+|++||||++||+.+
T Consensus 196 ~~g~~~~~~~v~~~~GHgIG~y~iHe~P~I~~~-~~~~~~~Le~GmV~aIEP~i~ 249 (360)
T 2nw5_A 196 IGGRMWPIRPISDLHGHSISQFRIHGGISIPAV-NNRDTTRIKGDSFYAVETFAT 249 (360)
T ss_dssp CSSSEEECEECTTCCEEEEBTTBSCCSCEECSS-CCCCCCBCCSSEEEEEEEEEE
T ss_pred cccccccccccCCeeEeeecCceeccCCEeccc-cCCCCcEEeCCcEEEEeceEE
Confidence 4678999999999 99999999766 345678999999999999765
No 25
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=4.1e-39 Score=325.98 Aligned_cols=204 Identities=15% Similarity=0.216 Sum_probs=178.9
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCCCCCCCccCCceeeecCCCccc
Q 018913 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA-GGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 136 ~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~-G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
+..+|+|||++||+.||+|++++.+++.++++.++||+||.||++.++..+.++ |+.. .+|+++|++|.|..++
T Consensus 181 l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~-----~~~~~iv~sG~n~~~~ 255 (494)
T 2iw2_A 181 IVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRH-----SSYTCICGSGENSAVL 255 (494)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCE-----ESSCCEEEEGGGGGCS
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCc-----CCCCceEEEcCccccc
Confidence 456899999999999999999999999999999999999999999999988877 7643 3589999999999999
Q ss_pred cc----CCCCccCCCCCeEEEeeeceeCcEEeceeeeEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 018913 215 HG----IPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVIN 289 (349)
Q Consensus 215 H~----~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~ 289 (349)
|+ .|++++|++||+|+||+|+.|+||++|++|||+| |+++++++++|++++++++++++++|||++++||+++++
T Consensus 256 Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~ 335 (494)
T 2iw2_A 256 HYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLAD 335 (494)
T ss_dssp SCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred cccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 95 5669999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHH----HcCCc---------------eeeccccccccccCcCCCC---------cccccccCCCcccCCCcEEEEcCC
Q 018913 290 RHAT----MSGFS---------------VVMHNVWFAIVIHCYSTED---------TKQCLVVSFSCFAKTGKIVLWSWY 341 (349)
Q Consensus 290 ~~~~----~~G~~---------------~v~~~~GHGIG~~~he~P~---------v~~~~~~~~~~~Le~Gmv~~le~g 341 (349)
+++. +.|+. .+.|.+|||||+.+||.+. +..+.....+.+|+|||||++|||
T Consensus 336 ~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPG 415 (494)
T 2iw2_A 336 RIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPG 415 (494)
T ss_dssp HHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCE
T ss_pred HHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCCCcccccccccccccccCCCCCEeCCCCEEEECCc
Confidence 8874 45652 2457899999999998432 222211234679999999999998
Q ss_pred cee
Q 018913 342 WRA 344 (349)
Q Consensus 342 ~~~ 344 (349)
+..
T Consensus 416 iy~ 418 (494)
T 2iw2_A 416 IYF 418 (494)
T ss_dssp EEC
T ss_pred ccc
Confidence 764
No 26
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=3.1e-39 Score=318.82 Aligned_cols=209 Identities=17% Similarity=0.131 Sum_probs=183.2
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCc--eeeecCCCc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPK--SCCTSVNEV 212 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~--~v~~g~n~~ 212 (349)
....+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.+++.+.++|+...+. +..|++ ++++|.|..
T Consensus 150 ~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~n~~ 228 (401)
T 1chm_A 150 ACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED-VELMDTWTWFQSGINTD 228 (401)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS-CCBCCCEEEEEEGGGGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCC-ccccCcceeeeeccccc
Confidence 34568999999999999999999999999999999999999999999999888876543221 122554 478999999
Q ss_pred ccccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 018913 213 ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (349)
Q Consensus 213 ~~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~ 292 (349)
.+|+.|++++|++||+|+||+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 229 ~~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~ 308 (401)
T 1chm_A 229 GAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIF 308 (401)
T ss_dssp STTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred ccccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceee-ccccccccccCcCCCCccc-ccccCCCcccCCCcEEEEcCCcee
Q 018913 293 TMSGFSVVM-HNVWFAIVIHCYSTEDTKQ-CLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 293 ~~~G~~~v~-~~~GHGIG~~~he~P~v~~-~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
++.||..+. +.+|||||+.+|+.|.... ....+.+.+|+|||||++|||+..
T Consensus 309 ~~~G~~~~~~~~~GHgiG~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~ 362 (401)
T 1chm_A 309 LKHDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIML 362 (401)
T ss_dssp HHHTCGGGBCSCSCBBCSBEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEE
T ss_pred HHcCCCcccCCCCCcccCccCCccccccCccccCCCCCccCCCCEEEEcCeeee
Confidence 999998654 6789999999998764211 012345789999999999998864
No 27
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1.3e-39 Score=325.06 Aligned_cols=205 Identities=14% Similarity=0.132 Sum_probs=181.0
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHH-HHH----HhccCC--CcHHHHHHHHHHHHHHc--------CC--CCCCCC
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLD-AAA----RMIRPG--VTTDEIDRVVHEATITA--------GG--YPSPLN 197 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~-~~~----~~i~pG--~Te~Ei~~~v~~~~~~~--------G~--~ps~l~ 197 (349)
.+..+|+|||++||+.||+|++++.+++. .+. +.++|| +||.||++.++..+.++ |+ +.....
T Consensus 170 ~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~ 249 (444)
T 3cb6_A 170 GLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQL 249 (444)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGE
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 34568999999999999999999999999 554 788999 99999999999888752 31 211112
Q ss_pred CccCCceeeecCCCc-ccccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcC
Q 018913 198 YHFFPKSCCTSVNEV-ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVK 276 (349)
Q Consensus 198 y~~fp~~v~~g~n~~-~~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lk 276 (349)
+.+||+++++|.|.. ++|+.|++++|+ ||+|+||+|+.|+||++|++|||++| ++++++++|++++++++++++++|
T Consensus 250 ~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~ 327 (444)
T 3cb6_A 250 EWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCR 327 (444)
T ss_dssp EESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcC
Confidence 356999999999998 999999999998 99999999999999999999999998 899999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHc--CCce-eeccccccccccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 277 PGVRFREIGEVINRHATMS--GFSV-VMHNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 277 PG~~~~eI~~~i~~~~~~~--G~~~-v~~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
||++++||++++++++.+. ||.. +.|++|||||+.+||.|.+.. .+.+.+|+|||||++|||+..
T Consensus 328 pG~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~~~~---~~~~~~l~~Gmv~tiEPgiy~ 395 (444)
T 3cb6_A 328 DGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLVN---AKNPRVLQAGMTLNLSIGFGN 395 (444)
T ss_dssp TTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCCS---TTCCCBCCTTCEEEEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhHhhcccccccccCccccCCccccC---CCCCcccCCCCEEEEEecccc
Confidence 9999999999999999999 5765 689999999999999885432 345789999999999999873
No 28
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=4.3e-39 Score=325.68 Aligned_cols=203 Identities=15% Similarity=0.051 Sum_probs=175.5
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccc
Q 018913 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (349)
Q Consensus 135 ~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~ 214 (349)
.+..+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+...+ ..|+. +.+|+++|++|.|.+++
T Consensus 152 ~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~~g~~-----~~sf~~IVasG~naa~~ 225 (517)
T 3l24_A 152 FYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-QHSEN-----DNPYGNIVALNENCAIL 225 (517)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCGG-----GSSSCCEEEEGGGGGCT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-HcCCC-----cCCcCCEEEEccccccc
Confidence 3456899999999999999999999999999999999999999998776654 33332 23599999999999999
Q ss_pred ccCCCCcc-CCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 018913 215 HGIPDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (349)
Q Consensus 215 H~~p~~r~-L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~ 293 (349)
|+.|+++. +++||+|+||+|+.|+||++|+||||++|++ ++++++|++++++++++++++|||++++||++++++++.
T Consensus 226 H~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i~ 304 (517)
T 3l24_A 226 HYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVA 304 (517)
T ss_dssp TCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHH
T ss_pred cCCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999885 7999999999999999999999999999974 789999999999999999999999999999999988764
Q ss_pred ----HcCCc---------------eeeccccccccccCcCCCCccccc------------ccCCCcccCCCcEEEEcCCc
Q 018913 294 ----MSGFS---------------VVMHNVWFAIVIHCYSTEDTKQCL------------VVSFSCFAKTGKIVLWSWYW 342 (349)
Q Consensus 294 ----~~G~~---------------~v~~~~GHGIG~~~he~P~v~~~~------------~~~~~~~Le~Gmv~~le~g~ 342 (349)
+.|+. .+.|.+|||||+.+||.|.+.++. ......+|+|||||++|||+
T Consensus 305 ~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p~~~~~~~g~~~~~~~~~p~l~~~~~Le~GMV~TIEPGi 384 (517)
T 3l24_A 305 QTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGL 384 (517)
T ss_dssp HHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC---------------CCTTCBCCTTEEEEECCEE
T ss_pred HHHHhcCCccccHHHHHhcCcccccCCCCCCCCCCcccccCccccccccccccccccccccCCCCccccCCcEEEECCEE
Confidence 44442 356789999999999999875421 01356899999999999998
Q ss_pred ee
Q 018913 343 RA 344 (349)
Q Consensus 343 ~~ 344 (349)
..
T Consensus 385 Y~ 386 (517)
T 3l24_A 385 YF 386 (517)
T ss_dssp EC
T ss_pred ee
Confidence 75
No 29
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=1.1e-39 Score=327.78 Aligned_cols=205 Identities=10% Similarity=0.049 Sum_probs=184.6
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccC------CCcHHHHHHHHHHHHHH-----cC------------
Q 018913 134 SDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRP------GVTTDEIDRVVHEATIT-----AG------------ 190 (349)
Q Consensus 134 ~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~p------G~Te~Ei~~~v~~~~~~-----~G------------ 190 (349)
..+..+|+|||++||+.||+|+++++.++..+.+.++| |+||.||++.++..+.+ +|
T Consensus 169 ~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 248 (467)
T 3biq_A 169 LGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNY 248 (467)
T ss_dssp HHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccc
Confidence 34467899999999999999999999999999999998 99999999999998887 65
Q ss_pred -CCCCCCCCccCCceeeecCCCc-ccccCCCCccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHH
Q 018913 191 -GYPSPLNYHFFPKSCCTSVNEV-ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECL 268 (349)
Q Consensus 191 -~~ps~l~y~~fp~~v~~g~n~~-~~H~~p~~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~ 268 (349)
+.+.. .+.+||+++++|.|.. ++|+.|++++|++||+|+||+|+.|+||++|++|||++| ++++++++|+++++++
T Consensus 249 ~~~~~~-~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~ 326 (467)
T 3biq_A 249 KFNFDL-LDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQ 326 (467)
T ss_dssp CCCGGG-EEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHH
T ss_pred cCCccc-ccCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHH
Confidence 33221 1346999999999998 999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHH-cCCCCcHHHHHHHHHHHHHHcC--Cc-eeeccccccccccCcCCCCcccccccCC-CcccCCCcEEEEcCCce
Q 018913 269 EKAISI-VKPGVRFREIGEVINRHATMSG--FS-VVMHNVWFAIVIHCYSTEDTKQCLVVSF-SCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 269 ~~ai~~-lkPG~~~~eI~~~i~~~~~~~G--~~-~v~~~~GHGIG~~~he~P~v~~~~~~~~-~~~Le~Gmv~~le~g~~ 343 (349)
++++++ +|||++++||++++++++.+.| |. .+.|.+|||||+.+||.|.+.. .++ +.+|+|||||++|||+.
T Consensus 327 ~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiGl~~hE~p~~~~---~~~~~~~l~~Gmv~tiEPgiy 403 (467)
T 3biq_A 327 KEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILN---VKNDYRKIQRGDCFNISFGFN 403 (467)
T ss_dssp HHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSS---TTCCSCCCCTTCEEEEEEEEE
T ss_pred HHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccccccccCCccCC---CCCCCCccCCCCEEEEeCeEE
Confidence 999999 9999999999999999999997 43 3567899999999999997542 235 78999999999999987
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=9.9e-39 Score=319.31 Aligned_cols=194 Identities=18% Similarity=0.190 Sum_probs=173.4
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH----cCCCCCCCCCccCCceeeecCCCcccc
Q 018913 140 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATIT----AGGYPSPLNYHFFPKSCCTSVNEVICH 215 (349)
Q Consensus 140 r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~----~G~~ps~l~y~~fp~~v~~g~n~~~~H 215 (349)
+.+||++||+.||+|++|++++++.+.+.++||+||.||++.++..+.+ +|+.. ..+||+++ |.|+.++|
T Consensus 158 i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~----g~~FP~iv--SvN~~v~H 231 (478)
T 1b6a_A 158 LDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNA----GLAFPTGC--SLNNCAAH 231 (478)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTE----EEEEEEEE--EETTEEEC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCcc----cCCCCeEE--ECCCcccc
Confidence 3459999999999999999999999999999999999998877776654 46631 24688654 56999999
Q ss_pred cCCC---CccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 018913 216 GIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (349)
Q Consensus 216 ~~p~---~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~ 292 (349)
++|+ +++|++||+|+||+|+.|+||++|++|||+|| +++++++++++++++++|+++|||++++||++++++++
T Consensus 232 g~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i 308 (478)
T 1b6a_A 232 YTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVM 308 (478)
T ss_dssp CCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9997 58999999999999999999999999999996 69999999999999999999999999999999999999
Q ss_pred HHcCCc---------eeeccccccc-cccCcCCCCcccccccCCCcccCCCcEEEEcCCce
Q 018913 293 TMSGFS---------VVMHNVWFAI-VIHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWR 343 (349)
Q Consensus 293 ~~~G~~---------~v~~~~GHGI-G~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~ 343 (349)
+++||+ ++++++|||| |+.+||.|.+.++ ..+...+|++||||++||+.+
T Consensus 309 ~~~G~~l~g~~~~~~~v~h~~GHGIGGl~iHE~P~vP~~-~~~~~~~Le~GMVftIEP~i~ 368 (478)
T 1b6a_A 309 ESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIV-KGGEATRMEEGEVYAIETFGS 368 (478)
T ss_dssp HTCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESS-SSCCCCBCCTTCEEEEEEEEE
T ss_pred HHcCCCcccccccceeecCcceeCCCCccccCCCcccee-cCCCCCEeCCCCEEEEeCeeE
Confidence 999985 6789999999 7999999888776 345678999999999999754
No 31
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=1.9e-39 Score=326.13 Aligned_cols=203 Identities=13% Similarity=0.158 Sum_probs=183.0
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----cHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeec
Q 018913 134 SDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGV-----TTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTS 208 (349)
Q Consensus 134 ~~~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i~pG~-----Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g 208 (349)
..+..+|+|||++||+.||+|+++++.+++.+.+.++||+ ||.||++.++.+++++|+.++ |++++++|
T Consensus 221 ~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~~~------~~~ivasG 294 (470)
T 4b28_A 221 EVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGEWI------ETRLLASG 294 (470)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCCEE------SCCCEEEG
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC------CCceeEEc
Confidence 3445799999999999999999999999999999999999 999999999999999998753 67789999
Q ss_pred CCCcccccCCCCccCCCCCeEEEeeece-eCcEEeceeeeEEec--CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Q 018913 209 VNEVICHGIPDSRKLEDGDIVNIDVTVY-YKGVHGDLNETYFVG--NADEASRQLVQCTYECLEKAISIVKPGVRFREIG 285 (349)
Q Consensus 209 ~n~~~~H~~p~~r~L~~GDiV~iD~g~~-~~GY~~D~~RT~~vG--~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~ 285 (349)
.|...+|+.|++++|++||+|+||+|+. ++||++|++|||++| +++++++++|++++++++++++++|||++++||+
T Consensus 295 ~n~~~~H~~~~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~a~i~~ikpG~~~~di~ 374 (470)
T 4b28_A 295 PRSNPWFQECGPRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLKPGVMIPELS 374 (470)
T ss_dssp GGGSSTTCCCCSCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHH
T ss_pred CccccCCCCCCCccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHH
Confidence 9999999999999999999999999987 899999999999999 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceeeccccccccccCcCCCCccccc---ccCCCcccCCCcEEEEcCCcee
Q 018913 286 EVINRHATMSGFSVVMHNVWFAIVIHCYSTEDTKQCL---VVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 286 ~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~v~~~~---~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
+++++++.++|... .+.+|||||+ .||.|.|.++. ..+++.+|+|||||++||++..
T Consensus 375 ~~ar~~i~~~~~~~-~~~~GHGIGl-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~ 434 (470)
T 4b28_A 375 ANTHVLDAKFQKQK-YGCLMHGVGL-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISE 434 (470)
T ss_dssp HTCCCCCHHHHTTC-CSCSEEEESS-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEEC
T ss_pred HHHHHHHHHhhhcC-CCCccCCCCc-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeec
Confidence 99999888755432 2578999999 59999887421 1345789999999999998763
No 32
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=313.80 Aligned_cols=203 Identities=16% Similarity=0.089 Sum_probs=179.7
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHH----hc-cCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCC
Q 018913 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAAR----MI-RPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN 210 (349)
Q Consensus 136 ~~~~r~iKs~~EIe~~R~Aa~ia~~al~~~~~----~i-~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n 210 (349)
...+|+|||++||+.||+|++++..++..+++ .+ +||+||.||++.++.+..+.+... ..+|++++++|.|
T Consensus 315 i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~~----~~sf~~iv~~G~n 390 (623)
T 3ctz_A 315 ICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFV----DLSFPTISSTGPT 390 (623)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTEE----EESSCCEEEEGGG
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCc----CCCCCceeeecCc
Confidence 45689999999999999999999998887774 46 899999999999987666543321 1359999999999
Q ss_pred CcccccCCC---CccCCCCCeEEEeeeceeCcEEeceeeeEEecCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHH
Q 018913 211 EVICHGIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKP-GVRFREIGE 286 (349)
Q Consensus 211 ~~~~H~~p~---~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkP-G~~~~eI~~ 286 (349)
.+++|+.|+ +++|++||+|+||+|+.|+||++|+||||++|+++++++++|+.+++++.+++++++| |+++.+|+.
T Consensus 391 ~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~ 470 (623)
T 3ctz_A 391 GAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDS 470 (623)
T ss_dssp GGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGG
T ss_pred cccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHH
Confidence 999999996 8999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCceeecccccccc--ccCcCCCCcccccccCCCcccCCCcEEEEcCCcee
Q 018913 287 VINRHATMSGFSVVMHNVWFAIV--IHCYSTEDTKQCLVVSFSCFAKTGKIVLWSWYWRA 344 (349)
Q Consensus 287 ~i~~~~~~~G~~~v~~~~GHGIG--~~~he~P~v~~~~~~~~~~~Le~Gmv~~le~g~~~ 344 (349)
++++++.+.||. +.|.+||||| +.+||.|..... +...+.+|+|||||++|||+..
T Consensus 471 ~ar~~l~~~G~~-~~h~~GHgvG~~l~vHE~P~~i~~-~~~~~~~L~~GMv~tiEPGiy~ 528 (623)
T 3ctz_A 471 FARSALWDSGLD-YLHGTGHGVGSFLNVHEGPCGISY-KTFSDEPLEAGMIVTDEPGYYE 528 (623)
T ss_dssp GGTHHHHHTTCC-CSSCSEEBCCSSSCSSCCSCEECT-TCSCSCBCCTTCEEEECCEEEE
T ss_pred HHHHHHHHhCCC-CCCCccccCCCCCCCCCCCccCCC-CCCCCCccCCCeEEEEeCcEEE
Confidence 999999999996 6799999999 999999983322 1235678999999999999853
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.1e-21 Score=192.86 Aligned_cols=175 Identities=17% Similarity=0.194 Sum_probs=149.9
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------cCCCcHHHHHHHHHHHHHHcC--CCCCCCCC--ccCCcee
Q 018913 139 VVEIKTPDQIERMRETCRIAREVLDAAARMI---------RPGVTTDEIDRVVHEATITAG--GYPSPLNY--HFFPKSC 205 (349)
Q Consensus 139 ~r~iKs~~EIe~~R~Aa~ia~~al~~~~~~i---------~pG~Te~Ei~~~v~~~~~~~G--~~ps~l~y--~~fp~~v 205 (349)
-.-|.+++-++.+|.|++|+..+|+.+.+.+ +||++..||+...+..+.+.+ .|....++ .+|| +
T Consensus 37 ekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFP--T 114 (614)
T 4b6a_t 37 DKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIP--T 114 (614)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEE--E
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccC--c
Confidence 3467899999999999999999999999877 556788899998888888754 35443332 3577 7
Q ss_pred eecCCCcccccCCC----------------------CccCCCCCeEEEeeeceeCcEEeceeeeEEecC-----------
Q 018913 206 CTSVNEVICHGIPD----------------------SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGN----------- 252 (349)
Q Consensus 206 ~~g~n~~~~H~~p~----------------------~r~L~~GDiV~iD~g~~~~GY~~D~~RT~~vG~----------- 252 (349)
|+|+|++++|++|. +..|++||+|.||+|+.++||.+|.++|++||.
T Consensus 115 ~ISvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~~~ 194 (614)
T 4b6a_t 115 TIDIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPT 194 (614)
T ss_dssp EEEETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTTTT
T ss_pred eecHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCccccccccccc
Confidence 89999999999993 247999999999999999999999999999984
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHHc----------------CCCCcHHHHHHHHHHHHHHcCCceeeccccccccccCcC
Q 018913 253 --ADEASRQLVQCTYECLEKAISIV----------------KPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHCYS 314 (349)
Q Consensus 253 --~~~e~~~l~~~~~ea~~~ai~~l----------------kPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he 314 (349)
.+....+++.+++.|.+++++.+ +||++..+|..+++++++.+|+.++....||+|+.....
T Consensus 195 ~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r~~i~ 274 (614)
T 4b6a_t 195 GPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFLAG 274 (614)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBTTBSS
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHhcCCcEEecccccccccceecC
Confidence 23456789999999999999887 999999999999999999999999999999999976544
Q ss_pred C
Q 018913 315 T 315 (349)
Q Consensus 315 ~ 315 (349)
.
T Consensus 275 g 275 (614)
T 4b6a_t 275 Q 275 (614)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.79 E-value=6.4e-06 Score=57.02 Aligned_cols=47 Identities=30% Similarity=0.775 Sum_probs=33.2
Q ss_pred CCccccccccccccCcccccccchhhhcCCCCCCccccChhhhhhchhHHHHHh
Q 018913 5 SDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH 58 (349)
Q Consensus 5 ~~~~~~~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h 58 (349)
+...+.....|..|++++.++|..|. ..+|||.+|.+.+|+.||..-
T Consensus 2 ~~~~~~~~~~C~~C~~~~~~~C~~C~-------~~~YCs~~CQ~~~W~~Hk~~C 48 (52)
T 2jw6_A 2 AMDAERKEQSCVNCGREAMSECTGCH-------KVNYCSTFCQRKDWKDHQHIC 48 (52)
T ss_dssp ---------CCSSSSSSCSEECTTTC-------SSEESSHHHHHHHTTTGGGTT
T ss_pred CcCccccCCcCCCCCCCCcCcCCCCC-------CEeecCHHHHHHHHHHHCHHH
Confidence 33444455679999999889999997 356899999999999887654
No 35
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.69 E-value=2.3e-05 Score=56.04 Aligned_cols=41 Identities=32% Similarity=0.780 Sum_probs=34.9
Q ss_pred ccccccccCcccccccchhhhcCCCCCCccccChhhhhhchhHHHHHh
Q 018913 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH 58 (349)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h 58 (349)
....|..|++++.++|..|. ..+|||.+|.+.+|+.||..-
T Consensus 14 ~~~~C~~C~~~~~~~Cs~C~-------~v~YCs~~CQ~~~W~~Hk~~C 54 (60)
T 2dj8_A 14 SSESCWNCGRKASETCSGCN-------TARYCGSFCQHKDWEKHHHIC 54 (60)
T ss_dssp CSCCCSSSCSCCCEECTTTS-------CCEESSHHHHHHTHHHHTTTS
T ss_pred CCcccccCCCCCcccCCCCC-------CEeeeCHHHHHHHHHHHHHHH
Confidence 44679999998889999998 357899999999999887654
No 36
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=97.69 E-value=3.2e-05 Score=57.07 Aligned_cols=42 Identities=21% Similarity=0.688 Sum_probs=36.3
Q ss_pred cccccccCcccccccchhhhcCCCCCCccccChhhhhhchhHHHHHhhh
Q 018913 12 SLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60 (349)
Q Consensus 12 ~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~~ 60 (349)
.+.|..|++.+.++|-.|.. .+|||.+|.+.+|+.||...+.
T Consensus 15 ~~~C~~C~~~~~~~Cs~Ck~-------v~YCs~eCQ~~~W~~HK~~C~~ 56 (70)
T 2d8q_A 15 RPRCAYCSAEASKRCSRCQN-------EWYCCRECQVKHWEKHGKTCVL 56 (70)
T ss_dssp CCBCSSSCCBCCCBCTTTSC-------CBCSCHHHHHHTHHHHHHHCCC
T ss_pred CCcCCCCCCcccccCCCCCC-------EeeCCHHHhHHHHHHHHHHHHH
Confidence 46799999998899999983 5689999999999999988753
No 37
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=97.63 E-value=2.1e-05 Score=56.21 Aligned_cols=42 Identities=31% Similarity=0.726 Sum_probs=35.3
Q ss_pred ccccccccCcccccccchhhhcCCCCCCccccChhhhhhchhHHHHHhh
Q 018913 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHL 59 (349)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~ 59 (349)
....|..|++++.++|..|. ..+|||.+|.+.+|+.||..-+
T Consensus 12 ~~~~C~~C~~~~~~~Cs~C~-------~v~YCs~~CQ~~dW~~Hk~~C~ 53 (60)
T 2od1_A 12 SSESCWNCGRKASETCSGCN-------TARYCGSFCQHKDWEKHHHICG 53 (60)
T ss_dssp CSSCCTTTSSCCCEECTTTS-------CCEESSHHHHHHHHHHHTTTSS
T ss_pred CCCccccCCCcccccCCCCC-------CeeecCHHHHHHHHHHHhHHHc
Confidence 44679999998889999998 3568999999999998876543
No 38
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=97.44 E-value=4.7e-05 Score=55.00 Aligned_cols=42 Identities=31% Similarity=0.726 Sum_probs=35.4
Q ss_pred ccccccccCcccccccchhhhcCCCCCCccccChhhhhhchhHHHHHhh
Q 018913 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHL 59 (349)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~ 59 (349)
....|..|++++.++|..|. ..+|||.+|.+.+|+.||...+
T Consensus 16 ~~~~C~~C~~~~~~~Cs~C~-------~~~YCs~~CQ~~~W~~Hk~~C~ 57 (64)
T 2odd_A 16 SSESCWNCGRKASETCSGCN-------TARYCGSFCQHKDWEKHHHICG 57 (64)
T ss_dssp CSSSCTTTSSCCCEEETTTS-------CCEESSHHHHHHHHHHHTTTTT
T ss_pred CCCcCccccCCCcccCCCCC-------ChhhCCHHHHHHHHHHHhHHHh
Confidence 34679999998889999998 3568999999999998887654
No 39
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=96.58 E-value=0.012 Score=56.90 Aligned_cols=95 Identities=19% Similarity=0.275 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCcee--eecC--CCcccccCC-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTSV--NEVICHGIP-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v--~~g~--n~~~~H~~p-~~r~L~ 224 (349)
.+|++.+++.++++.+.+.++||++-.||++.+.+.+.+.|.... |+..+ .+|. .+. +...+ ++.+|+
T Consensus 259 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~------~~h~~GHgiGl~~hE~-P~i~~~~~~~L~ 331 (378)
T 4ege_A 259 DVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEY------FVHRTGHGIGLCVHEE-PYIVAGNELPLV 331 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------CCSCSEEECSSSSSEE-EEECTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCc------CCCCCcccCCCCcCCC-CccCCCCCCccC
Confidence 467778888999999999999999999999999999999885321 22111 1222 111 11112 467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+.+.+..| +-.-+..|++|.
T Consensus 332 ~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 332 AGMAFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp TTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCEEEeCCccEEEEeeEEEEe
Confidence 999999999999865 567788888884
No 40
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=96.57 E-value=0.014 Score=55.49 Aligned_cols=95 Identities=20% Similarity=0.208 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCce--eeecCC--CcccccCC-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS--CCTSVN--EVICHGIP-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~--v~~g~n--~~~~H~~p-~~r~L~ 224 (349)
.+|++..++.++++.+.+.++||++-.||++.+++.+.+.|.... |+.. -..|.+ +. +...+ ++.+|+
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 311 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEY------FGHSTGHGIGLEIHEA-PGLAFRSDTVLE 311 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------CCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccc------CCCCCcccCCCCcCcC-CCCCCCCCCCcC
Confidence 456777788899999999999999999999999999999885332 2211 122321 11 11112 467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+.+.+..| +-.-+..|++|.
T Consensus 312 ~Gmv~tiEPgiy~~g~~gvriEd~v~vt 339 (356)
T 3q6d_A 312 PGMAVTVEPGIYIPGIGGVRIEDDIIVT 339 (356)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEC
T ss_pred CCCEEEECCEEEECCCCeEEEccEEEEe
Confidence 999999999998866 566788888885
No 41
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=96.43 E-value=0.013 Score=53.53 Aligned_cols=99 Identities=23% Similarity=0.338 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCC--ccccc-CC-CCccCCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHG-IP-DSRKLED 225 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~--~~~H~-~p-~~r~L~~ 225 (349)
..|++.+++.++++.+.+.++||++-.||.+.+.+.+.+.|..... .+.+. .+.....+ .+.+. .+ ++.+|++
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~~~GH--giG~~~he~p~i~~~~~~~~~~~L~~ 207 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIR-DYVGH--GVGRELHEDPQIPNYGTPGTGVVLRK 207 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCEECC-SSCEE--ECSSSSSEEEEECSCCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccC-CcccC--cccccccCCCccCCCCCCCCCCccCC
Confidence 4677788889999999999999999999999999999998864311 11111 11111111 12221 12 4678999
Q ss_pred CCeEEEeeecee------------------CcEEeceeeeEEec
Q 018913 226 GDIVNIDVTVYY------------------KGVHGDLNETYFVG 251 (349)
Q Consensus 226 GDiV~iD~g~~~------------------~GY~~D~~RT~~vG 251 (349)
|.++.|+.+.+. +++..-+..|++|.
T Consensus 208 Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt 251 (262)
T 1o0x_A 208 GMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILIT 251 (262)
T ss_dssp TCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEECCEEEcCCCceeecCCCceEEeeCCCcEEEEEEEEEEC
Confidence 999999998876 23445567788874
No 42
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=96.43 E-value=0.0068 Score=58.28 Aligned_cols=81 Identities=15% Similarity=0.109 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccccccC-----cCCCCcccccccCCCccc
Q 018913 256 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHC-----YSTEDTKQCLVVSFSCFA 330 (349)
Q Consensus 256 e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~-----he~P~v~~~~~~~~~~~L 330 (349)
..|++.+.+.++++.+.+.+|||++-.||.+.+++.+++.|-.......|+-+...+ |..|.- ...+.+|
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~~v~Hg~P~~-----~~~~~~L 121 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNSCAAHYTVNP-----GEQDIVL 121 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETTEEECCCCCT-----TCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCCEEEecCCCC-----CCCCeEe
Confidence 468999999999999999999999999999999999998765431111122121111 212221 1246789
Q ss_pred CCCcEEEEcCC
Q 018913 331 KTGKIVLWSWY 341 (349)
Q Consensus 331 e~Gmv~~le~g 341 (349)
++|.++.++.|
T Consensus 122 ~~GDiV~ID~G 132 (358)
T 3fm3_A 122 KEDDVLKIDFG 132 (358)
T ss_dssp CTTCEEEEEEE
T ss_pred cCCCEEEEEee
Confidence 99999988755
No 43
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=96.38 E-value=0.018 Score=55.09 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCcee--eecC--CCcccccCC-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTSV--NEVICHGIP-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v--~~g~--n~~~~H~~p-~~r~L~ 224 (349)
..|++..++.++++.+.+.++||++-.||++.+.+.+.+.|.... |+..+ ..|. .+. +...+ ++.+|+
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 311 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEY------FIHRTGHGLGLDVHEE-PYIGPDGEVILK 311 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGG------CCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccc------CCCCCcccCCCccCCC-cccCCCCCCCcC
Confidence 467778888899999999999999999999999999998876321 22111 1222 221 11112 467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+.+.+..| +..-+..|++|.
T Consensus 312 ~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 312 NGMTFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCeeEeCCCcEEEEeeEEEEe
Confidence 999999999998744 667788888885
No 44
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=96.33 E-value=0.014 Score=54.04 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCc--cccc-CC-CCccCCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHG-IP-DSRKLED 225 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~--~~H~-~p-~~r~L~~ 225 (349)
.+|++.+++.++++.+.+.++||++-.||++.+.+.+.+.|.... ..+.+. .+.....+. +.+. .+ ++.+|++
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~-~~~~GH--giG~~~hE~P~i~~~~~~~~~~~L~~ 231 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVV-RDFTGH--GIGTTFHNGLVVLHYDQPAVETIMQP 231 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEEC-CSSCEE--BCSSSSSCSCEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccC-CCcccc--cCCCcccCCCcccCccCCCCCCccCC
Confidence 456777788899999999999999999999999999988875431 111111 111121221 2222 12 4678999
Q ss_pred CCeEEEeeeceeC------------------cEEeceeeeEEec
Q 018913 226 GDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (349)
Q Consensus 226 GDiV~iD~g~~~~------------------GY~~D~~RT~~vG 251 (349)
|.++.|+.+.+.. .|..-+..|++|.
T Consensus 232 Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt 275 (285)
T 3pka_A 232 GMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVT 275 (285)
T ss_dssp TBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEEC
Confidence 9999999998762 3445677888884
No 45
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=96.32 E-value=0.023 Score=54.13 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCce--eeecC--CCcccccCC-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS--CCTSV--NEVICHGIP-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~--v~~g~--n~~~~H~~p-~~r~L~ 224 (349)
..|++..++.++++.+.+.++||++-.||++.+++.+.+.|.... |+.. -..|. .+. +...+ ++.+|+
T Consensus 236 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~hE~-p~i~~~~~~~l~ 308 (351)
T 1wy2_A 236 KQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEY------FNHSLGHGVGLEVHEW-PRVSQYDETVLR 308 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------CCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc------CCCCcccccCCCcCCC-CccCCCCCCCcC
Confidence 457777888999999999999999999999999999999885331 2211 12222 221 11112 467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+.+.+..| +-.-+..|++|.
T Consensus 309 ~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 336 (351)
T 1wy2_A 309 EGMVITIEPGIYIPKIGGVRIEDTILIT 336 (351)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCEEEeCCCCeEEEeeEEEEC
Confidence 999999999999854 556677777773
No 46
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=96.27 E-value=0.015 Score=53.07 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCC--ccccc-CC-CCccCCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHG-IP-DSRKLED 225 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~--~~~H~-~p-~~r~L~~ 225 (349)
.+|++.+++.++++++.+.++||++-.||++.+++.+.+.|.... ..+.+. .+.....+ .+++. .+ ++.+|++
T Consensus 122 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~-~~~~GH--giG~~~hE~p~i~~~~~~~~~~~L~~ 198 (262)
T 3mx6_A 122 KPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVV-RDYTGH--GIGRVFHDKPSILNYGRNGTGLTLKE 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEEC-CSCCEE--ECSSSSSEEEEECSSCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccC-CCcccc--ccCCcccCCCcccccCCCCCCCEeCC
Confidence 456677788889999999999999999999999999999876431 111111 12112222 12332 22 4678999
Q ss_pred CCeEEEeeecee
Q 018913 226 GDIVNIDVTVYY 237 (349)
Q Consensus 226 GDiV~iD~g~~~ 237 (349)
|.++.|+.+.+.
T Consensus 199 Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 199 GMFFTVEPMINA 210 (262)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEEeCEEEc
Confidence 999999999875
No 47
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=96.23 E-value=0.023 Score=53.92 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCcee--eecCC--CcccccC-CCCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTSVN--EVICHGI-PDSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v--~~g~n--~~~~H~~-p~~r~L~ 224 (349)
..|++..++.++++.+.+.++||++-.||++.+++.+.+.|.... |+..+ ..|.+ +. +.-. .++.+|+
T Consensus 242 ~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 314 (359)
T 2zsg_A 242 EVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEF------FGHSLGHGIGLEVHEG-PAISFRNDSPLP 314 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------BCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccc------CCCCCccccCcccCCC-CCcCCCCCCCcC
Confidence 457788888999999999999999999999999999999886321 22111 22321 21 1111 1467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+.+.+..| +-.-+.-|++|.
T Consensus 315 ~gmv~tiEPgiy~~~~~gvriEd~v~vt 342 (359)
T 2zsg_A 315 ENVVFTVEPGIYLEGKFGIRIEEDVVLK 342 (359)
T ss_dssp TTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCEEEECCCcEEEEeeEEEEc
Confidence 999999999999866 566778888884
No 48
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=96.10 E-value=0.033 Score=50.73 Aligned_cols=97 Identities=23% Similarity=0.247 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCC--C--ccccc-CC-CCccC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN--E--VICHG-IP-DSRKL 223 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n--~--~~~H~-~p-~~r~L 223 (349)
..|++.+++.++++.+.+.++||++-.||.+.+.+.+.+.|..+. ..+.+ -..|.. + .+.+. .+ ++.+|
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~G----HgiG~~~he~p~i~~~~~~~~~~~l 194 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVV-REYCG----HGIGRGFHEEPQVLHYDSRETNVVL 194 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEEC-SSCCE----EECSSSSSEEEEECSSCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEEC-CCccc----ccCCcceecCCcccCccCCCCCCCc
Confidence 457777888999999999999999999999999999999886421 11111 112221 1 11221 12 46789
Q ss_pred CCCCeEEEeeeceeC------------------cEEeceeeeEEec
Q 018913 224 EDGDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (349)
Q Consensus 224 ~~GDiV~iD~g~~~~------------------GY~~D~~RT~~vG 251 (349)
++|.++.|+.+.+.. ++..-+..|++|.
T Consensus 195 ~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 240 (263)
T 2gg2_A 195 KPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVT 240 (263)
T ss_dssp CTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CCCCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEEC
Confidence 999999999988752 3455677788874
No 49
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=95.96 E-value=0.045 Score=52.43 Aligned_cols=95 Identities=16% Similarity=0.264 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCcee--eecC--CCcccccCC-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTSV--NEVICHGIP-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v--~~g~--n~~~~H~~p-~~r~L~ 224 (349)
..|++..++.++++.+.+.++||++-.||++.+.+.+.+.|.... |+..+ ..|. ++. +...| ++++|+
T Consensus 260 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~hE~-P~i~~~~~~~L~ 332 (377)
T 4fkc_A 260 EVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEY------FIHRTGHGLGIDVHEE-PYISPGNKKILK 332 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTT------CCSCSEEECSSSSSEE-EEECSSCCCBCC
T ss_pred HHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhccccc------CCCCCeEeCCCccccC-CcccCCCCCEeC
Confidence 456777788889999999999999999999999999998875332 22111 1222 121 22222 467899
Q ss_pred CCCeEEEeeeceeCc-EEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~~G-Y~~D~~RT~~vG 251 (349)
+|.++.|+-+.+..| +-.-+.-|++|.
T Consensus 333 ~Gmv~tiEPgiy~~g~~GvriEd~v~Vt 360 (377)
T 4fkc_A 333 DGMVFTIEPGIYLQGKFGVRIEDDVALV 360 (377)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCeeEECCccEEEEccEEEEE
Confidence 999999999998765 445566778774
No 50
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=95.95 E-value=0.025 Score=52.41 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH----HHc--CCCCCCCCCccCCceeeecCC--Cc--cccc--C
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEAT----ITA--GGYPSPLNYHFFPKSCCTSVN--EV--ICHG--I 217 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~----~~~--G~~ps~l~y~~fp~~v~~g~n--~~--~~H~--~ 217 (349)
.+|++.+++.++++.+.+.++||++-.||++.+.+.+ .+. |..+. ..+.+ -.+|.+ +. +.+. .
T Consensus 149 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~~~g~~~~-~~~~G----HgiG~~~hE~P~i~~~~~~ 223 (286)
T 3tav_A 149 SDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIV-DGYGG----HGIGRSMHLDPFLPNEGAP 223 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHTCCCEEC-TTCCE----EECSSSSSEEEEECSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCccc-CCccc----CcccccccCCccccCcCCC
Confidence 3567777888999999999999999999999999999 777 64321 11111 112221 11 2221 1
Q ss_pred CCCccCCCCCeEEEeeeceeC------------------cEEeceeeeEEec
Q 018913 218 PDSRKLEDGDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (349)
Q Consensus 218 p~~r~L~~GDiV~iD~g~~~~------------------GY~~D~~RT~~vG 251 (349)
.++.+|++|.++.|+.+.+.. +|..-+..|++|.
T Consensus 224 ~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt 275 (286)
T 3tav_A 224 GKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVT 275 (286)
T ss_dssp SCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECC
T ss_pred CCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEEC
Confidence 246789999999999998763 4566777888884
No 51
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=95.93 E-value=0.037 Score=50.41 Aligned_cols=98 Identities=13% Similarity=0.224 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCc--ccc-cCC-CCccCCCC
Q 018913 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICH-GIP-DSRKLEDG 226 (349)
Q Consensus 151 ~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~--~~H-~~p-~~r~L~~G 226 (349)
.|+..+++.++++++.+.++||++-.||+.++++.+.+.|.... ..+ ++..+.....+. +.+ ..+ ++.+|++|
T Consensus 119 ~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~~~-~~~--~GHgiG~~~~e~p~i~~~~~~~~~~~L~~G 195 (264)
T 3tb5_A 119 IDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVV-RDF--VGHGIGPTIHESPMIPHYGEAGKGLRLKEG 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEEC-CSC--CEEECSSSSSEEEEECSSCCTTCSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCcee-eec--eecCCCCCCccCCccCccccCCCCCCccCC
Confidence 45677888999999999999999999999999999988875321 111 111111111111 111 112 24689999
Q ss_pred CeEEEeeeceeC------------------cEEeceeeeEEec
Q 018913 227 DIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (349)
Q Consensus 227 DiV~iD~g~~~~------------------GY~~D~~RT~~vG 251 (349)
.++.|+-+.+.. |+-.-+.-|++|-
T Consensus 196 mv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT 238 (264)
T 3tb5_A 196 MVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAIT 238 (264)
T ss_dssp CEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECC
T ss_pred cEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEc
Confidence 999999988753 3344566788884
No 52
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=95.93 E-value=0.048 Score=53.38 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcC-CCCCCCCCccCCceee--ec--CCCcccccCC-CCccC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAG-GYPSPLNYHFFPKSCC--TS--VNEVICHGIP-DSRKL 223 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G-~~ps~l~y~~fp~~v~--~g--~n~~~~H~~p-~~r~L 223 (349)
..|++..++.++++.+.+.++||++-.||+..+.+.+.+.| .+.. .|+..+. +| ..+......+ ++++|
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~-----~~~h~~GHgiGl~~he~p~~~~~~~~~~l 381 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEP-----NFVRNLGAGIGIEFRESSLLVNAKNPRVL 381 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGG-----GBCSCCEEECSSSSCBGGGCCSTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHh-----hcccccccccCccccCCccccCCCCCccc
Confidence 46777888889999999999999999999999999999985 2321 1222221 22 2222111111 56789
Q ss_pred CCCCeEEEeeece-----------eCcEEeceeeeEEec
Q 018913 224 EDGDIVNIDVTVY-----------YKGVHGDLNETYFVG 251 (349)
Q Consensus 224 ~~GDiV~iD~g~~-----------~~GY~~D~~RT~~vG 251 (349)
++|.++.|+.+.+ .+++-.-+.-|++|.
T Consensus 382 ~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt 420 (444)
T 3cb6_A 382 QAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQIT 420 (444)
T ss_dssp CTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECC
T ss_pred CCCCEEEEEeccccccCcccccccCCceEEEEEEEEEEC
Confidence 9999999999997 346788899999995
No 53
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=95.83 E-value=0.0033 Score=61.98 Aligned_cols=42 Identities=26% Similarity=0.589 Sum_probs=34.4
Q ss_pred cccccccCccc--ccccchhhhcCCCCCCccccChhhhhhchhHHHHHhhh
Q 018913 12 SLSCVRCGKPA--HLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60 (349)
Q Consensus 12 ~~~c~~c~~~~--~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~~ 60 (349)
...|..|++.. ...|+.|. ..+|||.+|.+.+|+.||...+.
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~-------~~~yCs~~Cq~~~w~~Hk~eC~~ 92 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCK-------QAFYCDVECQKEDWPLHKLECSS 92 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTS-------CCEESSHHHHHHHHHHHTTTHHH
T ss_pred CCcCCcccccCCCCCCCCCCc-------ceeecChhhhhhhhhHHHHHHHH
Confidence 35699999853 38899998 35789999999999999987754
No 54
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=95.79 E-value=0.035 Score=50.16 Aligned_cols=99 Identities=19% Similarity=0.282 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCC---cccccC-C-CCccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE---VICHGI-P-DSRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~---~~~H~~-p-~~r~L~ 224 (349)
..|++.+++.++++.+.+.++||++-.||.+.+.+.+.+.|.... ..+.+ ..+.....+ .++++. + ++.+|+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~-~~~~G--HgiG~~~he~p~~i~~~~~~~~~~~l~ 194 (252)
T 1qxy_A 118 MKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVI-KNLTG--HGVGLSLHEAPAHVLNYFDPKDKTLLT 194 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEEC-TTCCE--EECSSSSSEEEEEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-CCccc--cccCcccccCCccccCCCCCCCCCCcc
Confidence 456677888899999999999999999999999999998876431 11111 111111111 112221 2 467899
Q ss_pred CCCeEEEeeecee------------------CcEEeceeeeEEec
Q 018913 225 DGDIVNIDVTVYY------------------KGVHGDLNETYFVG 251 (349)
Q Consensus 225 ~GDiV~iD~g~~~------------------~GY~~D~~RT~~vG 251 (349)
+|.++.|+.+.+. +++..-+..|++|.
T Consensus 195 ~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 239 (252)
T 1qxy_A 195 EGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp TTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred CCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEEC
Confidence 9999999998764 23555677888874
No 55
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.78 E-value=0.0043 Score=61.02 Aligned_cols=43 Identities=28% Similarity=0.689 Sum_probs=34.4
Q ss_pred cccccccCcc--cccccchhhhcCCCCCCccccChhhhhhchhHHHHHhhhh
Q 018913 12 SLSCVRCGKP--AHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKA 61 (349)
Q Consensus 12 ~~~c~~c~~~--~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~~~ 61 (349)
...|..|++. ....|+.|.. .+|||.+|.+.+|+.||...+.-
T Consensus 47 ~~~C~~C~~~~~~~~~C~~C~~-------~~yCs~~Cq~~~w~~Hk~eC~~~ 91 (429)
T 3qwp_A 47 GVVCDRCLLGKEKLMRCSQCRV-------AKYCSAKCQKKAWPDHKRECKCL 91 (429)
T ss_dssp TTBCTTTCCBCSSCEECTTTSC-------CEESSHHHHHHTHHHHHHHHHHH
T ss_pred CCcCcCCCCcCCCCCcCCCCCC-------cccCChhhhhhhhhhhHHhhhhH
Confidence 3569999974 3488999973 46899999999999999877543
No 56
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=95.60 E-value=0.032 Score=53.00 Aligned_cols=85 Identities=15% Similarity=0.114 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceee-ccccccccccCcCCCCcccccccCCCcccCCCc
Q 018913 256 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVM-HNVWFAIVIHCYSTEDTKQCLVVSFSCFAKTGK 334 (349)
Q Consensus 256 e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~-~~~GHGIG~~~he~P~v~~~~~~~~~~~Le~Gm 334 (349)
.++++.+.+.++++.+++.+|||++-.||.+.+.+.+.++|..... .+.+..--...-....+.|+ ..++.+|++|.
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~--~~~~~~l~~GD 148 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHG--IPDSRELEEGD 148 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECC--CCCSCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCC--CCCCccccCCC
Confidence 4788899999999999999999999999999999999999875311 11221111111111223332 23467899999
Q ss_pred EEEEcCCc
Q 018913 335 IVLWSWYW 342 (349)
Q Consensus 335 v~~le~g~ 342 (349)
++.++.|-
T Consensus 149 ~v~iD~g~ 156 (337)
T 4fuk_A 149 ILNIDVSS 156 (337)
T ss_dssp EEEEEEEE
T ss_pred EEEEecce
Confidence 99887653
No 57
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=95.59 E-value=0.036 Score=52.56 Aligned_cols=99 Identities=16% Similarity=0.230 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCC--cccccCCC--CccCCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHGIPD--SRKLED 225 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~--~~~H~~p~--~r~L~~ 225 (349)
..|++.+++.++++++++.++||++-.||.+++++.+.+.|.... ..+.+ -.+.....+ .+.|+..+ +++|++
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~-~~~~G--HGIG~~~HE~P~i~~~~~~~~~~~L~~ 265 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVV-RSYCG--HGIHKLFHTAPNVPHYAKNKAVGVMKS 265 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEEC-CSCCE--EECSSSSSEEEEECCSSSCCCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCcc-CCccc--CCcCcccccCCcccccccCCCCCEECC
Confidence 456777788899999999999999999999999999999886421 11111 111111111 12332211 378999
Q ss_pred CCeEEEeeeceeC-----------------c-EEeceeeeEEec
Q 018913 226 GDIVNIDVTVYYK-----------------G-VHGDLNETYFVG 251 (349)
Q Consensus 226 GDiV~iD~g~~~~-----------------G-Y~~D~~RT~~vG 251 (349)
|.++.|+-+.+.. | +..-+..|++|.
T Consensus 266 GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVT 309 (329)
T 2b3h_A 266 GHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVT 309 (329)
T ss_dssp TCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEc
Confidence 9999999988742 2 455677888884
No 58
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=95.58 E-value=0.071 Score=52.60 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-ccCCCcHHHHHHHHHHHHHHcC-CCCCCCCCccCCceee--ecC--CCcccccCC-C-C
Q 018913 149 ERMRETCRIAREVLDAAARM-IRPGVTTDEIDRVVHEATITAG-GYPSPLNYHFFPKSCC--TSV--NEVICHGIP-D-S 220 (349)
Q Consensus 149 e~~R~Aa~ia~~al~~~~~~-i~pG~Te~Ei~~~v~~~~~~~G-~~ps~l~y~~fp~~v~--~g~--n~~~~H~~p-~-~ 220 (349)
+.+|++..++.++++.+.+. ++||++-.||++.+.+.+.+.| .+.. .|+..+. +|. .+.-....+ + +
T Consensus 313 ~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~-----~~~h~~GHgiGl~~hE~p~~~~~~~~~ 387 (467)
T 3biq_A 313 EEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVP-----NFTKNIGSLIGLEFRDSNFILNVKNDY 387 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGG-----GBCSCCEEECSSSSCCGGGBSSTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhh-----cCCCCcccccccccccCCccCCCCCCC
Confidence 34677888889999999999 9999999999999999999987 2221 1222221 222 222110111 3 6
Q ss_pred ccCCCCCeEEEeeece-e------CcEEeceeeeEEec
Q 018913 221 RKLEDGDIVNIDVTVY-Y------KGVHGDLNETYFVG 251 (349)
Q Consensus 221 r~L~~GDiV~iD~g~~-~------~GY~~D~~RT~~vG 251 (349)
++|++|.++.|+.+.+ . +.|-.-+.-|++|.
T Consensus 388 ~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 388 RKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp CCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 7899999999999998 3 46778889999986
No 59
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=95.56 E-value=0.11 Score=51.03 Aligned_cols=100 Identities=22% Similarity=0.319 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH----cCCCC---------CCCCCccCCceee--ec--CCCc
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATIT----AGGYP---------SPLNYHFFPKSCC--TS--VNEV 212 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~----~G~~p---------s~l~y~~fp~~v~--~g--~n~~ 212 (349)
..|++..++.++++.+.+.++||++-.||.+.+.+.+.+ .|... ..+. ..|+..+. .| +.+
T Consensus 285 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~-~~~~Hg~GHgiGl~~he- 362 (440)
T 2v3z_A 285 AQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHR-PFFMHGLSHWLGLDVHD- 362 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTT-TTCCSCSCCBCSSSSSC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccc-cccCCCCCCcCCccccc-
Confidence 356777888899999999999999999999988877753 34210 0000 01222211 22 222
Q ss_pred ccccCC-CCccCCCCCeEEEeeeceeC----------cEEeceeeeEEec
Q 018913 213 ICHGIP-DSRKLEDGDIVNIDVTVYYK----------GVHGDLNETYFVG 251 (349)
Q Consensus 213 ~~H~~p-~~r~L~~GDiV~iD~g~~~~----------GY~~D~~RT~~vG 251 (349)
.++..+ ++++|++|.++.|+-+.+.. ++-.-+.-|++|.
T Consensus 363 ~p~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 363 VGVYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp CSCCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred CCCcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 122222 45789999999999999976 5888899999994
No 60
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=95.54 E-value=0.038 Score=53.28 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCC--cccccC--CCCccCCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHGI--PDSRKLED 225 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~--~~~H~~--p~~r~L~~ 225 (349)
..|++.+++.++++++++.++||++-.||++++++.+.+.|.... ..+.+. .+.....+ .+.|+. .++++|++
T Consensus 220 e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~-~~~~GH--GIG~~vHE~P~i~~~~~~~~~~~L~~ 296 (368)
T 3s6b_A 220 EGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVV-RSYSGH--GVGKLFHSNPTVPHFKKNKAVGIMKP 296 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEEC-CSCCEE--ECSSSSSEEEEECSSSSCCCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcc-cceeeC--CCCccccCCCccccccCCCCCCEECC
Confidence 356777788899999999999999999999999999988875421 111111 11111111 133322 13568999
Q ss_pred CCeEEEeeeceeC-----------------c-EEeceeeeEEec
Q 018913 226 GDIVNIDVTVYYK-----------------G-VHGDLNETYFVG 251 (349)
Q Consensus 226 GDiV~iD~g~~~~-----------------G-Y~~D~~RT~~vG 251 (349)
|.++.|+-+.+.. | +..-+..|++|.
T Consensus 297 GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVT 340 (368)
T 3s6b_A 297 GHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLIT 340 (368)
T ss_dssp TCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEEc
Confidence 9999999988752 2 345677788874
No 61
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.44 E-value=0.0068 Score=60.70 Aligned_cols=43 Identities=28% Similarity=0.664 Sum_probs=34.3
Q ss_pred cccccccCcc--cccccchhhhcCCCCCCccccChhhhhhchhHHHHHhhhh
Q 018913 12 SLSCVRCGKP--AHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKA 61 (349)
Q Consensus 12 ~~~c~~c~~~--~~l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~~~ 61 (349)
...|..|.+. ..+.|+.|.. .+|||.+|.+.+|+.||...+.-
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~-------~~yCs~~Cq~~~w~~Hk~eC~~~ 93 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKF-------AHYCDRTCQKDAWLNHKNECAAI 93 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSC-------CEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCC-------cCcCCHHHhhhhhhHHHHHhHHH
Confidence 3569999774 3388999973 46899999999999999877643
No 62
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=95.31 E-value=0.081 Score=51.00 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCccccc------CCCCccC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG------IPDSRKL 223 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~------~p~~r~L 223 (349)
..|++..++.++++.+.+.++||++-.||++.+.+.+.+.|..... . +++...+...+.+. +|+ ..++.+|
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~~-~-~~~GHgiG~~~He~-~~~~g~~~~~~~~~~l 348 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRYR-T-FGYGHSFGVLBHYY-GREAGVELREDIZTVL 348 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGB-C-SCSCBBCEEEETTE-ECCTTCBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCeec-C-CCcccccCCccccC-CcccCcccCCCCCCcc
Confidence 4577778889999999999999999999999999999998854310 0 11111121111111 221 1246789
Q ss_pred CCCCeEEEeeeceeC----cE-EeceeeeEEec
Q 018913 224 EDGDIVNIDVTVYYK----GV-HGDLNETYFVG 251 (349)
Q Consensus 224 ~~GDiV~iD~g~~~~----GY-~~D~~RT~~vG 251 (349)
++|.++.|+.+.+.. |. -.-+.-+++|.
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~~~~G~ried~v~Vt 381 (402)
T 1kp0_A 349 EPGMVVSMEPMVMBPEGEPGAGGYREHDILVIK 381 (402)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCCcEEEECCceeecCccCCCCcEEEEEEEEEc
Confidence 999999999999875 43 33455566663
No 63
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=94.95 E-value=0.14 Score=50.19 Aligned_cols=101 Identities=15% Similarity=0.330 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc----CCCCCCCCCc-cCCceeeecCCCcccccCC--CCcc
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA----GGYPSPLNYH-FFPKSCCTSVNEVICHGIP--DSRK 222 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~----G~~ps~l~y~-~fp~~v~~g~n~~~~H~~p--~~r~ 222 (349)
..|++..++.++++++.+.++||++-.||...+.+.+.+. |.......|. .|+..+.-|.. .-.|-.| .+++
T Consensus 281 ~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG-l~vhe~~~~~~~~ 359 (427)
T 3ig4_A 281 RQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG-LDTHDVGTYKDRV 359 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS-SSSSCCCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC-cCCCcCCCCCCCE
Confidence 3567778888999999999999999999999988887764 4321000000 12322211111 1134333 5789
Q ss_pred CCCCCeEEEeeeceeC--cEEeceeeeEEec
Q 018913 223 LEDGDIVNIDVTVYYK--GVHGDLNETYFVG 251 (349)
Q Consensus 223 L~~GDiV~iD~g~~~~--GY~~D~~RT~~vG 251 (349)
|++|.++.|+.+.+.. |+-.-+.-|++|.
T Consensus 360 L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 360 LEEGMVITIEPGLYIEEESIGIRIEDDILVT 390 (427)
T ss_dssp CCTTCEEEECCEEEEGGGTEEEECBEEEEEC
T ss_pred eCCCCEEEECCEEEECCCceEEEEeeEEEEe
Confidence 9999999999999864 5777888999994
No 64
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=94.92 E-value=0.16 Score=47.29 Aligned_cols=85 Identities=22% Similarity=0.275 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceee-ecCCC--cccccC-CC-CccCC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC-TSVNE--VICHGI-PD-SRKLE 224 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~-~g~n~--~~~H~~-p~-~r~L~ 224 (349)
..++..+++.++++.+.+.++||++-.||.+++++.+.+.|.... .++.+. .+. ....+ .+++.. ++ +.+|+
T Consensus 103 ~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~-~~~~GH--gIG~l~~He~p~ip~~~~~~~~~~L~ 179 (295)
T 1xgs_A 103 EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPI-VNLSGH--KIERYKLHAGISIPNIYRPHDNYVLK 179 (295)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEEC-TTCCEE--ECBTTBSSCSCEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEE-CCCcCC--CCCCcccCCCCcCCccCCCCCCCEeC
Confidence 355777888999999999999999999999999999998876421 111111 111 01111 133332 33 67899
Q ss_pred CCCeEEEeeecee
Q 018913 225 DGDIVNIDVTVYY 237 (349)
Q Consensus 225 ~GDiV~iD~g~~~ 237 (349)
+|.++.|+.+.+.
T Consensus 180 ~GmV~tIEP~i~~ 192 (295)
T 1xgs_A 180 EGDVFAIEPFATI 192 (295)
T ss_dssp TTCEEEECCEEES
T ss_pred CCCEEEEcceeEC
Confidence 9999999998873
No 65
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=94.65 E-value=0.19 Score=48.62 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccC------CCCccC
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI------PDSRKL 223 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~------p~~r~L 223 (349)
..|++..++.++++++.+.++||++-.||++.+.+.+.+.|..... . +++...+..-.++ .+|+. .++.+|
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~~-~-~~~GHgiG~~~h~-~~~~~g~~~~~~~~~~L 348 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYR-T-FGYGHSFGTLSHY-YGREAGLELREDIDTVL 348 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGGB-C-SCSCBBCSBEETT-EECCTTSBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccc-C-CCCCcccCccCCc-cccccCccccCCCCCcc
Confidence 4577888889999999999999999999999999999998853310 0 0111111111111 11211 146789
Q ss_pred CCCCeEEEeeeceeC----c-EEeceeeeEEec
Q 018913 224 EDGDIVNIDVTVYYK----G-VHGDLNETYFVG 251 (349)
Q Consensus 224 ~~GDiV~iD~g~~~~----G-Y~~D~~RT~~vG 251 (349)
++|.++.|.-+.+.. | +-.-+.-+++|.
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~g~~GvriEd~vlVt 381 (401)
T 1chm_A 349 EPGMVVSMEPMIMLPEGLPGAGGYREHDILIVN 381 (401)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCCCEEEEcCeeeeccccCCCCeEEEeeeEEEC
Confidence 999999999999864 4 334455666663
No 66
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=94.41 E-value=0.08 Score=50.85 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCceeeccccccccccCcCCCCccccccc-CC-CcccCCC
Q 018913 256 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVMHNVWFAIVIHCYSTEDTKQCLVV-SF-SCFAKTG 333 (349)
Q Consensus 256 e~~~l~~~~~ea~~~ai~~lkPG~~~~eI~~~i~~~~~~~G~~~v~~~~GHGIG~~~he~P~v~~~~~~-~~-~~~Le~G 333 (349)
..+++.+.+.++++.+++.++||++-.||.+.+++.+.+.|-.......++....... ..+.|+..+ +. +.+|++|
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s~N--~~~~H~~P~~~d~~~~L~~G 126 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMN--SCAAHYTVNPGEQDIVLKED 126 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEET--TEEECCCCCTTCCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCccCccccCceeecc--ccccCCCCCcccCCcCcCCC
Confidence 3677788888999999999999999999999999999987632100011111111111 223333111 12 5789999
Q ss_pred cEEEEcCC
Q 018913 334 KIVLWSWY 341 (349)
Q Consensus 334 mv~~le~g 341 (349)
.++.++.|
T Consensus 127 DlV~ID~G 134 (360)
T 2nw5_A 127 DVLKIDFG 134 (360)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 99888754
No 67
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=93.32 E-value=0.72 Score=45.48 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 018913 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 187 (349)
Q Consensus 151 ~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~ 187 (349)
.++..+++.++++++++.++||++-.||...+++.+.
T Consensus 271 ~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i~ 307 (451)
T 3rva_A 271 FRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIA 307 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 4577788999999999999999999999988776653
No 68
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=93.30 E-value=0.032 Score=39.29 Aligned_cols=38 Identities=26% Similarity=0.800 Sum_probs=27.4
Q ss_pred CCCcccccc-ccccccCc----ccccccchhhhcCCCCCCccccChhhhhh
Q 018913 4 GSDAAETTS-LSCVRCGK----PAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (349)
Q Consensus 4 ~~~~~~~~~-~~c~~c~~----~~~l~cp~c~~~~~~~~~~~fc~~~cf~~ 49 (349)
.++...|.. ..|.-|++ +++-.||.|. + .|||-.|+|.
T Consensus 2 ~~~~s~m~~~~~C~vC~~~~~~~akY~CPrC~---~-----rYCSl~C~k~ 44 (59)
T 1x4s_A 2 SSGSSGMEPAGPCGFCPAGEVQPARYTCPRCN---A-----PYCSLRCYRT 44 (59)
T ss_dssp CCCCSSCCCCEEECSSCTTCCEEECEECTTTC---C-----EESSHHHHHH
T ss_pred CCCCCCCCCCCcCcCCCCCcCCCccccCcCCC---C-----CccChHHHHH
Confidence 344444543 46988984 6679999997 3 3899999993
No 69
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=92.87 E-value=0.41 Score=46.48 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCC--C----cccccC------
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN--E----VICHGI------ 217 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n--~----~~~H~~------ 217 (349)
..++..+++.++++.+++.++||++-.||..++++.+.+.|..+. .++.+ -.+|.. + .+.+..
T Consensus 145 ~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~G~~~v-~~~~G----HGIG~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI-EGMLS----HQLKQHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEEC-TTCEE----EEEBTTBSSCSCEEESSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCccc----ccCCCccccCCcccccCCCcccccC
Confidence 356677788899999999999999999999999999998876432 12211 112221 1 111210
Q ss_pred CCCccCCCCCeEEEeeecee
Q 018913 218 PDSRKLEDGDIVNIDVTVYY 237 (349)
Q Consensus 218 p~~r~L~~GDiV~iD~g~~~ 237 (349)
-++.+|++|.++.|+.+++.
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~ 239 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEES
T ss_pred CCCCEeCCCCEEEEeCceEe
Confidence 13568999999999999875
No 70
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.60 E-value=0.076 Score=37.00 Aligned_cols=29 Identities=31% Similarity=1.016 Sum_probs=24.4
Q ss_pred ccccccCcccccccchhhhcCCCCCCccccChhhhhh
Q 018913 13 LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (349)
Q Consensus 13 ~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~ 49 (349)
..|.-|+.+++-.||.|. + .|||-.|||.
T Consensus 13 ~~C~vC~~~~kY~CPrC~---~-----~yCSl~C~k~ 41 (56)
T 2yqq_A 13 VVCVICLEKPKYRCPACR---V-----PYCSVVCFRK 41 (56)
T ss_dssp CCCTTTCSCCSEECTTTC---C-----EESSHHHHHH
T ss_pred CccCcCcCCCeeeCCCCC---C-----CeeCHHHHHH
Confidence 359889998889999997 3 4899999875
No 71
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=91.63 E-value=0.28 Score=48.79 Aligned_cols=96 Identities=8% Similarity=0.075 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCC--CCCCCCccCCcee--eec---CCCc--ccccCC-
Q 018913 149 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGY--PSPLNYHFFPKSC--CTS---VNEV--ICHGIP- 218 (349)
Q Consensus 149 e~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~--ps~l~y~~fp~~v--~~g---~n~~--~~H~~p- 218 (349)
+..++...++.+++..+++.++||++-.||..++++.+.+.|.. ...+.+..|+..+ .+| ..+. ++|..+
T Consensus 271 ~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~ 350 (478)
T 1b6a_A 271 PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGG 350 (478)
T ss_dssp GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCCccccCCCccceecCC
Confidence 35778888899999999999999999999999999999988742 0000000011111 121 2221 344433
Q ss_pred CCccCCCCCeEEEeeeceeC-cEEece
Q 018913 219 DSRKLEDGDIVNIDVTVYYK-GVHGDL 244 (349)
Q Consensus 219 ~~r~L~~GDiV~iD~g~~~~-GY~~D~ 244 (349)
++.+|++|.++.|+.+++.+ |+.-+.
T Consensus 351 ~~~~Le~GMVftIEP~i~~G~G~~~ed 377 (478)
T 1b6a_A 351 EATRMEEGEVYAIETFGSTGKGVVHDD 377 (478)
T ss_dssp CCCBCCTTCEEEEEEEEESSCSCCEEC
T ss_pred CCCEeCCCCEEEEeCeeECCCCEEEEC
Confidence 36789999999999987743 444433
No 72
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=91.40 E-value=1 Score=45.14 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEAT 186 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~ 186 (349)
..++..+++.++++++.+.++||++-.||...+++.+
T Consensus 267 e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i 303 (517)
T 3l24_A 267 EFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRV 303 (517)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 3567788899999999999999999999998877655
No 73
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=91.36 E-value=0.36 Score=49.60 Aligned_cols=97 Identities=20% Similarity=0.115 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceee--ecCCCc---ccccCCCCccC
Q 018913 150 RMRETCRIAREVLDAAARMIRP-GVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEV---ICHGIPDSRKL 223 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~p-G~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~--~g~n~~---~~H~~p~~r~L 223 (349)
.+|++..++.+++.++.++++| |++-.+|+.++.+.+.+.|.+-. ++....+. ..+++. +.....++.+|
T Consensus 439 ~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~----h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L 514 (623)
T 3ctz_A 439 YEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYL----HGTGHGVGSFLNVHEGPCGISYKTFSDEPL 514 (623)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCS----SCSEEBCCSSSCSSCCSCEECTTCSCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCC----CCccccCCCCCCCCCCCccCCCCCCCCCcc
Confidence 3567778888999999999999 99999999999999999886310 11111121 122221 11111145789
Q ss_pred CCCCeEEEeeeceeCc-EEeceeeeEEe
Q 018913 224 EDGDIVNIDVTVYYKG-VHGDLNETYFV 250 (349)
Q Consensus 224 ~~GDiV~iD~g~~~~G-Y~~D~~RT~~v 250 (349)
++|.++.+.-|.+..| |-.-+.-|++|
T Consensus 515 ~~GMv~tiEPGiy~~g~~GiRiEd~vlV 542 (623)
T 3ctz_A 515 EAGMIVTDEPGYYEDGAFGIRIENVVLV 542 (623)
T ss_dssp CTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCCeEEEEeCcEEECCceEEEEeeEEEE
Confidence 9999999999998765 55556566665
No 74
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=91.30 E-value=0.28 Score=48.74 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecC-CC--ccccc-----CCCCc
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSV-NE--VICHG-----IPDSR 221 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~-n~--~~~H~-----~p~~r 221 (349)
.+|++..++.++++++.+.++||++-.||++++++.+.+.|... |... --.+|. .+ .+.+. ..++.
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~----~~~~--GHGIGl~HE~P~i~~~~~~~~~~~~~ 418 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQK----YGCL--MHGVGLCDEWPLVAYPDHAVAGAYDY 418 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTC----CSCS--EEEESSSEEEEEECCTTTCCTTSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcC----CCCc--cCCCCcCCCCCcccCccccccCCCCC
Confidence 46777888899999999999999999999998876665533211 1000 111221 10 11111 12467
Q ss_pred cCCCCCeEEEeeecee--CcEEeceeeeEEec
Q 018913 222 KLEDGDIVNIDVTVYY--KGVHGDLNETYFVG 251 (349)
Q Consensus 222 ~L~~GDiV~iD~g~~~--~GY~~D~~RT~~vG 251 (349)
+|++|.++.|+-+.+. +.+-.-+.-|++|.
T Consensus 419 ~L~~GMV~tiEPgiy~~~g~~GvriEd~vlVt 450 (470)
T 4b28_A 419 PLEPGMTLCVEALISEEGGDFSIKLEDQVLIT 450 (470)
T ss_dssp BCCTTCEEEEEEEEECTTCSCEEEEEEEEEEC
T ss_pred EECCCCEEEEcCeeecCCCcEEEEEeeEEEEe
Confidence 8999999999998875 45677889999985
No 75
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=90.75 E-value=0.98 Score=44.93 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 018913 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 187 (349)
Q Consensus 150 ~~R~Aa~ia~~al~~~~~~i~pG~Te~Ei~~~v~~~~~ 187 (349)
..|+..+++.++++++++.++||++-.||...+++.+.
T Consensus 302 ~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~~~i~ 339 (494)
T 2iw2_A 302 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHL 339 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 45777778889999999999999999999988877664
No 76
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=73.93 E-value=1.5 Score=31.58 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=10.2
Q ss_pred CccccChhhhhhc
Q 018913 38 GAAFCTQDCFKAS 50 (349)
Q Consensus 38 ~~~fc~~~cf~~~ 50 (349)
...|||+-|-.-+
T Consensus 27 ~rPFCSeRCr~iD 39 (68)
T 1lv3_A 27 FRPFCSKRCQLID 39 (68)
T ss_dssp CCSSSSHHHHHHH
T ss_pred CCcccCHHHHhhh
Confidence 4679999997655
No 77
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.61 E-value=2.5 Score=29.83 Aligned_cols=47 Identities=28% Similarity=0.555 Sum_probs=27.7
Q ss_pred CCCcccccc--ccccccCcc-cc---cccchhhhcCCCCCCccccChhhhhhch--hHHHHHh
Q 018913 4 GSDAAETTS--LSCVRCGKP-AH---LQCPKCMELKLPREGAAFCTQDCFKASW--TSHKSVH 58 (349)
Q Consensus 4 ~~~~~~~~~--~~c~~c~~~-~~---l~cp~c~~~~~~~~~~~fc~~~cf~~~w--~~hk~~h 58 (349)
|+.+++... ..|.+|++. +. .+|-.|.. |---++||...- +.|+..|
T Consensus 1 ~~s~~~~v~H~~~Cd~C~~~pi~G~RykC~~C~d--------~DLC~~C~~~g~~~~~H~~~H 55 (63)
T 2e5r_A 1 GSSGSSGVFHPVECSYCHSESMMGFRYRCQQCHN--------YQLCQDCFWRGHAGGSHSNQH 55 (63)
T ss_dssp CCCCSSSCCSCSCCSSSCCCSSCSCEEEESSCSS--------CEECHHHHHHCCCCSSSCTTC
T ss_pred CCCCcCCceeCCCCcCCCCcceecceEEecCCCC--------chhHHHHHhCCCcCCCCCCCC
Confidence 444555432 569999975 44 56666653 223468998752 3455555
No 78
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=54.07 E-value=15 Score=37.45 Aligned_cols=87 Identities=10% Similarity=0.019 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHc---------CCCCcHHHHHHHHHHHHHHcCCcee-----eccccccccccC-----cCC
Q 018913 255 EASRQLVQCTYECLEKAISIV---------KPGVRFREIGEVINRHATMSGFSVV-----MHNVWFAIVIHC-----YST 315 (349)
Q Consensus 255 ~e~~~l~~~~~ea~~~ai~~l---------kPG~~~~eI~~~i~~~~~~~G~~~v-----~~~~GHGIG~~~-----he~ 315 (349)
...+.+-+.+..+++.+++.+ +||++..||-+...+.+.+.+-.++ ....+|-.++.+ |-.
T Consensus 47 tKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~ISvN~~vaHys 126 (614)
T 4b6a_t 47 NKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTTIDIDQISGGWC 126 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEEEEETTEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCceecHHHcccCCC
Confidence 356677777788888888766 6668888888887777766432211 112333333322 223
Q ss_pred CCccccc-------------ccCCCcccCCCcEEEEcCC
Q 018913 316 EDTKQCL-------------VVSFSCFAKTGKIVLWSWY 341 (349)
Q Consensus 316 P~v~~~~-------------~~~~~~~Le~Gmv~~le~g 341 (349)
|...+.. ....+.+|++|.|+-++.|
T Consensus 127 P~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLG 165 (614)
T 4b6a_t 127 PEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLG 165 (614)
T ss_dssp CCTTS------------------CCCBCCTTCEEEEEEE
T ss_pred CCCcchhhcccccccccccccccccccccCCCEEEEEee
Confidence 4333210 1123678999999887644
No 79
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=54.01 E-value=6.4 Score=27.06 Aligned_cols=34 Identities=18% Similarity=0.471 Sum_probs=20.9
Q ss_pred ccccccccCcccccccchhhhcCCCCCCccccChhhhhhc
Q 018913 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKAS 50 (349)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~ 50 (349)
++-.|..|+-.++ .+..|.+++.||||++|-+..
T Consensus 6 ~kCaC~~C~c~Vs------~~eai~~dGK~YCSe~Ca~gH 39 (55)
T 1jjd_A 6 VKCACEPCLCNVD------PSKAIDRNGLYYCSEACADGH 39 (55)
T ss_dssp BCCSSTTCCCCBC------TTTSEESSSCEESSHHHHHTS
T ss_pred eeecCCCCeeEec------hHHhhhcCCeEEehHHHHccC
Confidence 4334555654433 233455668899999998764
No 80
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=50.28 E-value=5.1 Score=26.11 Aligned_cols=11 Identities=27% Similarity=0.878 Sum_probs=9.2
Q ss_pred cccChhhhhhc
Q 018913 40 AFCTQDCFKAS 50 (349)
Q Consensus 40 ~fc~~~cf~~~ 50 (349)
-|||-.|-++.
T Consensus 27 RFCS~~Carry 37 (43)
T 2w0t_A 27 RFCSVSCSRSY 37 (43)
T ss_dssp SSSSHHHHHHH
T ss_pred ceechhhhCcc
Confidence 38999998875
No 81
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=44.04 E-value=6.2 Score=25.51 Aligned_cols=15 Identities=40% Similarity=0.846 Sum_probs=11.7
Q ss_pred ccccccccCcccccc
Q 018913 11 TSLSCVRCGKPAHLQ 25 (349)
Q Consensus 11 ~~~~c~~c~~~~~l~ 25 (349)
..|.|.+|||+..|.
T Consensus 16 ~YRvC~~CgkPi~ls 30 (44)
T 2lo3_A 16 QYRVCEKCGKPLALT 30 (44)
T ss_dssp CEEECTTTCCEEETT
T ss_pred cchhhcccCCcchHH
Confidence 348899999997643
No 82
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=41.36 E-value=10 Score=26.79 Aligned_cols=21 Identities=29% Similarity=0.787 Sum_probs=15.3
Q ss_pred cccccccccCcccc------cccchhh
Q 018913 10 TTSLSCVRCGKPAH------LQCPKCM 30 (349)
Q Consensus 10 ~~~~~c~~c~~~~~------l~cp~c~ 30 (349)
.+...|..||.+.. ++||-|-
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG 45 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECG 45 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCC
Confidence 34577999998654 7788775
No 83
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=38.08 E-value=17 Score=21.77 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=18.4
Q ss_pred eeeeEEecCCCHHHHHHHHHHHHH
Q 018913 244 LNETYFVGNADEASRQLVQCTYEC 267 (349)
Q Consensus 244 ~~RT~~vG~~~~e~~~l~~~~~ea 267 (349)
.-||+.||-.+++.+++-+.+..+
T Consensus 4 qvrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 4 QVRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp SCCCCCBCCCHHHHHHHHHHHHHH
T ss_pred eeEEEEecCCHHHHHHHHHHHHhc
Confidence 348999998888888887766554
No 84
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=35.67 E-value=1.1e+02 Score=26.32 Aligned_cols=49 Identities=22% Similarity=0.269 Sum_probs=35.4
Q ss_pred CCCCCeEEEeeecee-CcEEeceee-----eEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 018913 223 LEDGDIVNIDVTVYY-KGVHGDLNE-----TYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (349)
Q Consensus 223 L~~GDiV~iD~g~~~-~GY~~D~~R-----T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 280 (349)
+++||.|.|++..+. +|-.-|-++ +|.+|.- .+...++.++.-+++|-+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g---------~vipG~eeaL~Gm~vGe~ 57 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHG---------SLISGLETALEGHEVGDK 57 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSS---------SSCHHHHHHHSSSCTTCE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCC---------CcchHHHHHHcCCCCCCE
Confidence 688999999999886 887666653 5666631 234667778888888853
No 85
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=31.77 E-value=14 Score=24.63 Aligned_cols=28 Identities=32% Similarity=0.637 Sum_probs=16.6
Q ss_pred cccccCcccccccchhhhcCCCCCCccccChhhhhh
Q 018913 14 SCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (349)
Q Consensus 14 ~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~ 49 (349)
.|..||++... -. .+- .--|||+.|-++
T Consensus 20 ~C~~CG~~i~~-~~----~~r---~krFCS~sCR~~ 47 (49)
T 2l8e_A 20 KCEYCGKYAPA-EQ----FRG---SKRFCSMTCAKR 47 (49)
T ss_dssp ECTTTCCEEEG-GG----CTT---TSSSCSHHHHHH
T ss_pred cChhccCcccc-cc----CCC---CCccCCHHHHhh
Confidence 57777776531 11 111 346999999765
No 86
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=31.34 E-value=33 Score=27.35 Aligned_cols=51 Identities=16% Similarity=0.256 Sum_probs=36.8
Q ss_pred CccCCCCCeEEEeeecee-CcEEecee------eeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018913 220 SRKLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (349)
Q Consensus 220 ~r~L~~GDiV~iD~g~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~ 279 (349)
.+.++.||.|.|+...+. +|-.-|-+ .+|.+|.- .+...++.++..+++|-
T Consensus 40 G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g---------~vi~G~eeaL~gmk~Ge 97 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGG---------MVIKGWDEGVQGMKVGG 97 (133)
T ss_dssp SCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSS---------SSCHHHHHHSTTCBTTC
T ss_pred CCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCC---------ChhHHHHHHHcCCCCCC
Confidence 467899999999999886 77666654 26777731 13456777788888884
No 87
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=31.34 E-value=38 Score=26.57 Aligned_cols=52 Identities=10% Similarity=0.091 Sum_probs=38.1
Q ss_pred CccCCCCCeEEEeeecee--CcEEeceee------eEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 018913 220 SRKLEDGDIVNIDVTVYY--KGVHGDLNE------TYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (349)
Q Consensus 220 ~r~L~~GDiV~iD~g~~~--~GY~~D~~R------T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 280 (349)
.+..+.||.|.|+...+. +|-.-|-++ +|.+|.- .+...++.++..+++|-+
T Consensus 31 g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g---------~~i~g~e~~l~gm~~Ge~ 90 (129)
T 2vn1_A 31 ENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQG---------EVIKGWDICVSSMRKNEK 90 (129)
T ss_dssp GGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSS---------SSCHHHHHHHTTCCTTCE
T ss_pred CCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCC---------CcCHHHHHHHhCCCCCCE
Confidence 467889999999999887 776656543 5777741 235677788888888854
No 88
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=30.07 E-value=32 Score=26.65 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=35.2
Q ss_pred CccCCCCCeEEEeeeceeCcEEecee----eeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018913 220 SRKLEDGDIVNIDVTVYYKGVHGDLN----ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (349)
Q Consensus 220 ~r~L~~GDiV~iD~g~~~~GY~~D~~----RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~ 279 (349)
+++++.||.|.||..+..+|-.-|-+ .+|.+|.- .+...++.++.-+++|-
T Consensus 27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~~~p~~f~lG~g---------~vi~G~ee~L~Gmk~Ge 81 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIVDNKKLASASAQNYELTIGSN---------SFIKGFETGLIAMKVNQ 81 (113)
T ss_dssp --CCCSSEEEEEEEEEEETTEECSTTCCSEEEEEETSS---------CSCTTHHHHHHTSCSSE
T ss_pred CCCCCCCCEEEEEEEEEECCEEcccCCccCEEEEECCC---------ChhHHHHHHHCCCCCCC
Confidence 57899999999999988888766654 35666631 13356667777777774
No 89
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.65 E-value=32 Score=23.13 Aligned_cols=14 Identities=7% Similarity=0.048 Sum_probs=9.7
Q ss_pred hhchhHHHHHhhhh
Q 018913 48 KASWTSHKSVHLKA 61 (349)
Q Consensus 48 ~~~w~~hk~~h~~~ 61 (349)
+.+...|++.|...
T Consensus 50 ~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 50 PSNLSKHMKKFHGD 63 (70)
T ss_dssp HHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhCC
Confidence 35567888888643
No 90
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 4fip_D 4fjc_D 4fk5_E 3m99_D
Probab=29.43 E-value=20 Score=27.31 Aligned_cols=16 Identities=38% Similarity=0.781 Sum_probs=12.7
Q ss_pred cccccccccCcccccc
Q 018913 10 TTSLSCVRCGKPAHLQ 25 (349)
Q Consensus 10 ~~~~~c~~c~~~~~l~ 25 (349)
...|.|.+||||..|.
T Consensus 73 ~~YRvCn~CGkPI~l~ 88 (96)
T 3mhs_E 73 IQYRVCEKCGKPLALT 88 (96)
T ss_dssp CCCEEETTTCCEECGG
T ss_pred ccchhhhccCCceeHH
Confidence 4568999999998753
No 91
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=29.40 E-value=27 Score=26.13 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=36.3
Q ss_pred ccCCCCCeEEEeeecee-CcEEecee------eeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Q 018913 221 RKLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRF 281 (349)
Q Consensus 221 r~L~~GDiV~iD~g~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~ 281 (349)
+.++.||.|.|+..++. +|-.-|-+ .+|.+|.- .+...++.++.-+++|-+.
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~~~~l~gm~~Ge~~ 62 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTG---------QVIKGWDQGLLGMCEGEKR 62 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSS---------SSCHHHHTTSTTCCTTCEE
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCC---------CccHHHHHHHhCCCCCCEE
Confidence 56889999999999886 77555543 35667631 2356777778888888543
No 92
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=28.90 E-value=45 Score=25.92 Aligned_cols=52 Identities=15% Similarity=0.212 Sum_probs=39.3
Q ss_pred CccCCCCCeEEEeeecee--CcEEeceee--------eEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 018913 220 SRKLEDGDIVNIDVTVYY--KGVHGDLNE--------TYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (349)
Q Consensus 220 ~r~L~~GDiV~iD~g~~~--~GY~~D~~R--------T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 280 (349)
.+.++.||.|.|+..++. +|-.-|-++ +|.+|.- .+...++.++..+++|-+
T Consensus 26 g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~---------~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 26 HRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGIL---------EALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp SCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSC---------SSCHHHHHHSTTCCTTCE
T ss_pred CCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCC---------ChhHHHHHHHhCCCCCCE
Confidence 678999999999999986 787666653 5677631 245678888888888854
No 93
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.64 E-value=36 Score=23.84 Aligned_cols=20 Identities=25% Similarity=0.562 Sum_probs=13.0
Q ss_pred CCCccccccccccccCcccc
Q 018913 4 GSDAAETTSLSCVRCGKPAH 23 (349)
Q Consensus 4 ~~~~~~~~~~~c~~c~~~~~ 23 (349)
|+.+.......|.+|++++.
T Consensus 1 gs~~~~~~~~~C~~C~~~I~ 20 (76)
T 2cu8_A 1 GSSGSSGMASKCPKCDKTVY 20 (76)
T ss_dssp CCCSCCCCCCBCTTTCCBCC
T ss_pred CccccCCCCCCCcCCCCEeE
Confidence 34444445567999998664
No 94
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=27.20 E-value=20 Score=25.07 Aligned_cols=22 Identities=32% Similarity=0.739 Sum_probs=16.4
Q ss_pred ccccccCcccc-cccchhhhcCC
Q 018913 13 LSCVRCGKPAH-LQCPKCMELKL 34 (349)
Q Consensus 13 ~~c~~c~~~~~-l~cp~c~~~~~ 34 (349)
+.|..||.-+- .+||.|-+.-.
T Consensus 6 r~C~~Cg~YTLk~~CP~CG~~t~ 28 (60)
T 2aus_D 6 RKCPKCGRYTLKETCPVCGEKTK 28 (60)
T ss_dssp EECTTTCCEESSSBCTTTCSBCE
T ss_pred eECCCCCCEEccccCcCCCCccC
Confidence 67999998764 55998876543
No 95
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=27.03 E-value=14 Score=21.22 Aligned_cols=9 Identities=44% Similarity=1.364 Sum_probs=7.4
Q ss_pred cccchhhhc
Q 018913 24 LQCPKCMEL 32 (349)
Q Consensus 24 l~cp~c~~~ 32 (349)
.|||.|.+.
T Consensus 7 vqcpvcqq~ 15 (29)
T 3vhs_A 7 VQCPVCQQM 15 (29)
T ss_dssp EECTTTCCE
T ss_pred eeChHHHHh
Confidence 789999864
No 96
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=26.42 E-value=51 Score=31.86 Aligned_cols=42 Identities=19% Similarity=0.354 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEEeeeceeCc
Q 018913 174 TTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKG 239 (349)
Q Consensus 174 Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~~G 239 (349)
|+.+|+..+......++-+ + +-+++++.||.|.||+.+..+|
T Consensus 130 tde~Vd~~l~~l~~~~a~~------------~------------~ve~~a~~gD~V~id~~~~~dG 171 (433)
T 3gty_X 130 LEKYVERRIEDLRESHALL------------E------------PKEGPAEAGDLVRVNMEVYNEE 171 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCE------------E------------ECCSCCCTTSEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHHHhcCee------------e------------ccccccCCCCEEEEEEEEEECC
Confidence 7788888887666555421 1 2246789999999999877766
No 97
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=24.58 E-value=26 Score=20.65 Aligned_cols=14 Identities=36% Similarity=0.672 Sum_probs=8.5
Q ss_pred cccccccccCcccc
Q 018913 10 TTSLSCVRCGKPAH 23 (349)
Q Consensus 10 ~~~~~c~~c~~~~~ 23 (349)
||+..|..|+|..-
T Consensus 1 ~m~~~C~~C~k~Vy 14 (31)
T 1zfo_A 1 XMNPNCARCGKIVY 14 (31)
T ss_dssp -CCCBCSSSCSBCC
T ss_pred CCCCcCCccCCEEe
Confidence 34556877887653
No 98
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=24.36 E-value=25 Score=23.93 Aligned_cols=14 Identities=21% Similarity=0.207 Sum_probs=9.9
Q ss_pred hhhchhHHHHHhhh
Q 018913 47 FKASWTSHKSVHLK 60 (349)
Q Consensus 47 f~~~w~~hk~~h~~ 60 (349)
.+.+...|+++|+.
T Consensus 44 ~~~~L~~H~~~Htg 57 (60)
T 4gzn_C 44 DQSEVNRHLKVHQN 57 (60)
T ss_dssp SHHHHHHHGGGGSC
T ss_pred CHHHHHHHhCccCC
Confidence 34667888888864
No 99
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=24.08 E-value=35 Score=24.25 Aligned_cols=29 Identities=31% Similarity=0.911 Sum_probs=21.8
Q ss_pred cccccCcccccccchhhhcCCCCCCccccChhhhhhc
Q 018913 14 SCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKAS 50 (349)
Q Consensus 14 ~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~~~cf~~~ 50 (349)
-|.-|...|+|+|..|-.. -||.. ||+.-
T Consensus 10 WC~ICneDAtlrC~gCdgD-------LYC~r-C~rE~ 38 (67)
T 2d8v_A 10 WCCICNEDATLRCAGCDGD-------LYCAR-CFREG 38 (67)
T ss_dssp SCTTTCSCCCEEETTTTSE-------EECSS-HHHHH
T ss_pred eeEEeCCCCeEEecCCCCc-------eehHH-HHHHH
Confidence 4767999999999999632 37864 78764
No 100
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=23.71 E-value=17 Score=27.01 Aligned_cols=32 Identities=28% Similarity=0.640 Sum_probs=19.1
Q ss_pred cccccCcccc--cccchhhhcC--CCC--CCccccChh
Q 018913 14 SCVRCGKPAH--LQCPKCMELK--LPR--EGAAFCTQD 45 (349)
Q Consensus 14 ~c~~c~~~~~--l~cp~c~~~~--~~~--~~~~fc~~~ 45 (349)
.|..|++..+ --||.|.+.- ++. ..+|||.+-
T Consensus 20 ~C~~C~~~~~~~afCPeCgq~Le~lkACGA~~yFC~~C 57 (81)
T 2jrp_A 20 HCETCAKDFSLQALCPDCRQPLQVLKACGAVDYFCQNG 57 (81)
T ss_dssp ECTTTCCEEEEEEECSSSCSCCCEEEETTEEEECCTTT
T ss_pred ECccccccCCCcccCcchhhHHHHHHhcCCcCeeeccC
Confidence 4877887655 3588776542 100 147898764
No 101
>4fc8_A Transcription protein RTR1; zinc finger; 2.50A {Kluyveromyces lactis}
Probab=23.69 E-value=22 Score=31.37 Aligned_cols=13 Identities=31% Similarity=0.708 Sum_probs=11.4
Q ss_pred CccccChhhhhhc
Q 018913 38 GAAFCTQDCFKAS 50 (349)
Q Consensus 38 ~~~fc~~~cf~~~ 50 (349)
.+.|||..||+++
T Consensus 107 l~~fCS~~Cy~aS 119 (219)
T 4fc8_A 107 LTEYCTKAHFRCS 119 (219)
T ss_dssp GGTCSSHHHHHHH
T ss_pred HHhhhhHHHHHHH
Confidence 3679999999997
No 102
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=23.19 E-value=85 Score=25.87 Aligned_cols=49 Identities=27% Similarity=0.373 Sum_probs=37.3
Q ss_pred CCCCCeEEEeeeceeCcEEeceee-------------------eEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 018913 223 LEDGDIVNIDVTVYYKGVHGDLNE-------------------TYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (349)
Q Consensus 223 L~~GDiV~iD~g~~~~GY~~D~~R-------------------T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 280 (349)
+++||.|.|+..++.+|-.-|.++ +|.+|.- .+...++.++.-+++|-+
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g---------~vi~G~eeaL~gm~~Ge~ 69 (157)
T 3pr9_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG---------QVLPGLDEAILEMDVGEE 69 (157)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSS---------SSCHHHHHHHHHCCTTCE
T ss_pred CCCCCEEEEEEEEEECCEEEEeccccccccccccccccCCCCEEEEECCC---------cHHHHHHHHHcCCCCCCE
Confidence 688999999999998987777653 4666731 245677888888998864
No 103
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.00 E-value=27 Score=25.02 Aligned_cols=21 Identities=19% Similarity=0.668 Sum_probs=15.1
Q ss_pred ccccccccCcccc------cccchhhh
Q 018913 11 TSLSCVRCGKPAH------LQCPKCME 31 (349)
Q Consensus 11 ~~~~c~~c~~~~~------l~cp~c~~ 31 (349)
....|..||.... ..||.|--
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCc
Confidence 4467999998632 67888865
No 104
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=21.55 E-value=93 Score=23.49 Aligned_cols=50 Identities=20% Similarity=0.197 Sum_probs=35.7
Q ss_pred CCCCCeEEEeeecee-CcEEeceee------eEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Q 018913 223 LEDGDIVNIDVTVYY-KGVHGDLNE------TYFVGNADEASRQLVQCTYECLEKAISIVKPGVRF 281 (349)
Q Consensus 223 L~~GDiV~iD~g~~~-~GY~~D~~R------T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~ 281 (349)
++.||.|.++...+. +|-.-|-++ +|.+|.- .+...++.++..+++|-+.
T Consensus 22 ~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~e~~l~gm~~Ge~~ 78 (113)
T 1yat_A 22 PKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVG---------QVIKGWDVGIPKLSVGEKA 78 (113)
T ss_dssp CCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSS---------SSCHHHHHHGGGCCTTCEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCC---------CccHHHHHHHhCCCCCCEE
Confidence 789999999998886 775555542 5666631 2356778888888888643
No 105
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=21.50 E-value=42 Score=23.36 Aligned_cols=43 Identities=23% Similarity=0.505 Sum_probs=26.0
Q ss_pred ccccccCcccc-cccchhhhcCCCCCCccccChhhhhhchhHHHHHhh
Q 018913 13 LSCVRCGKPAH-LQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHL 59 (349)
Q Consensus 13 ~~c~~c~~~~~-l~cp~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~ 59 (349)
+.|..|+.-+- .+||.|-..-....+.-|=-. .-|..|+..-|
T Consensus 7 r~C~~CgvYTLk~~CP~CG~~T~~~hParfSp~----Dky~~yR~~~k 50 (60)
T 2apo_B 7 KKCPKCGLYTLKEICPKCGEKTVIPKPPKFSLE----DRWGKYRRMLK 50 (60)
T ss_dssp EECTTTCCEESSSBCSSSCSBCBCCCCCCCCTT----CTTHHHHHHHH
T ss_pred eeCCCCCCEeccccCcCCCCcCCCCCCCCCCCC----cchHHHHHHHH
Confidence 67999988654 679999876543334444222 34566665433
No 106
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=21.18 E-value=1e+02 Score=29.72 Aligned_cols=45 Identities=22% Similarity=0.260 Sum_probs=29.0
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCccCCceeeecCCCcccccCCCCccCCCCCeEEEeeeceeCcE
Q 018913 172 GVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240 (349)
Q Consensus 172 G~Te~Ei~~~v~~~~~~~G~~ps~l~y~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiV~iD~g~~~~GY 240 (349)
-+|+.+|+..+.....+++-+ + +.+++++.||.|.+|+.+..+|=
T Consensus 131 eVtde~Vd~~l~~l~~~~a~~------------~------------~~~~~~~~gD~V~i~y~g~~dG~ 175 (432)
T 1w26_A 131 EVTDADVDGMLDTLRKQQATW------------K------------EKDGAVEAEDRVTIDFTGSVDGE 175 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTCEE------------C------------CCSSCCCTTCEEEECEEEESSSC
T ss_pred CcCHHHHHHHHHHHHHhCCee------------e------------ecCCCCCCCCEEEEEEEEeeCCe
Confidence 357777777777555554321 1 23466888999999887765553
No 107
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=20.76 E-value=1.1e+02 Score=24.05 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=35.8
Q ss_pred CCCCCeEEEeeecee-CcEEecee------eeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Q 018913 223 LEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRF 281 (349)
Q Consensus 223 L~~GDiV~iD~g~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~ 281 (349)
++.||.|.|+...+. +|-.-|-+ .+|.+|.- .+...++.++..+++|-+.
T Consensus 40 ~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g---------~vi~G~e~aL~gm~~Ge~~ 96 (130)
T 2lgo_A 40 PQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAG---------EVIKGWDQGVATMTLGEKA 96 (130)
T ss_dssp CCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTST---------TSCHHHHHHHHHSCTTEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCC---------CccHHHHHHHhCCCCCCEE
Confidence 889999999999886 77555544 35666631 2356778888888888543
No 108
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=20.53 E-value=97 Score=23.04 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=35.8
Q ss_pred CCCCCeEEEeeecee-CcEEecee------eeEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Q 018913 223 LEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRF 281 (349)
Q Consensus 223 L~~GDiV~iD~g~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~ 281 (349)
++.||.|.++...+. +|-.-|-+ .+|.+|.- .+...++.++..+++|-+.
T Consensus 16 ~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~~~~l~gm~~Ge~~ 72 (107)
T 2ppn_A 16 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQ---------EVIRGWEEGVAQMSVGQRA 72 (107)
T ss_dssp CCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSC---------CSCHHHHHHHTTCCTTCEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCC---------ChHHHHHHHHhCCCCCCEE
Confidence 789999999999886 77655554 35666731 2356777888888888543
Done!